Query psy159
Match_columns 285
No_of_seqs 217 out of 2571
Neff 9.7
Searched_HMMs 29240
Date Sat Aug 17 00:28:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uem_A Protein disulfide-isome 100.0 8.8E-38 3E-42 275.7 25.4 253 1-263 66-355 (361)
2 3idv_A Protein disulfide-isome 100.0 1E-37 3.5E-42 260.0 21.4 208 55-265 14-237 (241)
3 3apo_A DNAJ homolog subfamily 100.0 7.4E-37 2.5E-41 294.8 26.0 247 5-262 497-764 (780)
4 3apo_A DNAJ homolog subfamily 100.0 8.7E-37 3E-41 294.2 23.3 255 5-274 392-664 (780)
5 3us3_A Calsequestrin-1; calciu 100.0 3.7E-33 1.3E-37 246.4 19.5 217 55-280 12-241 (367)
6 1sji_A Calsequestrin 2, calseq 100.0 2.9E-32 9.8E-37 239.5 17.7 216 56-281 11-240 (350)
7 1a8l_A Protein disulfide oxido 100.0 1.4E-30 4.9E-35 214.8 21.7 194 62-260 8-221 (226)
8 2b5e_A Protein disulfide-isome 100.0 1.6E-30 5.6E-35 238.9 20.8 100 55-155 13-118 (504)
9 2ywm_A Glutaredoxin-like prote 100.0 6.6E-30 2.3E-34 211.3 21.5 191 63-260 8-215 (229)
10 3f8u_A Protein disulfide-isome 100.0 1.4E-29 5E-34 231.3 18.9 215 57-281 2-232 (481)
11 3f8u_A Protein disulfide-isome 100.0 2E-28 7E-33 223.7 24.8 250 5-267 63-463 (481)
12 2r2j_A Thioredoxin domain-cont 100.0 8.2E-30 2.8E-34 226.4 14.4 215 56-280 5-232 (382)
13 3ed3_A Protein disulfide-isome 100.0 6.5E-28 2.2E-32 206.8 22.6 217 52-276 13-279 (298)
14 2hls_A Protein disulfide oxido 100.0 3.1E-26 1.1E-30 190.9 22.5 192 63-262 14-223 (243)
15 1sji_A Calsequestrin 2, calseq 99.9 3.9E-25 1.3E-29 194.0 26.2 223 5-239 77-315 (350)
16 3us3_A Calsequestrin-1; calciu 99.9 7.8E-25 2.7E-29 193.2 26.0 223 5-239 79-317 (367)
17 3idv_A Protein disulfide-isome 99.9 2.5E-25 8.6E-30 184.9 14.8 155 5-161 77-239 (241)
18 3q6o_A Sulfhydryl oxidase 1; p 99.9 3.2E-23 1.1E-27 172.8 20.5 197 55-262 11-236 (244)
19 2ywm_A Glutaredoxin-like prote 99.9 3.6E-22 1.2E-26 164.8 14.5 146 5-158 69-219 (229)
20 2r2j_A Thioredoxin domain-cont 99.9 1E-20 3.5E-25 167.7 23.3 226 5-245 70-308 (382)
21 1a8l_A Protein disulfide oxido 99.9 5.4E-22 1.8E-26 163.3 13.2 149 6-158 67-225 (226)
22 3uem_A Protein disulfide-isome 99.9 2.7E-20 9.3E-25 163.8 23.4 197 55-262 16-227 (361)
23 3t58_A Sulfhydryl oxidase 1; o 99.9 6.5E-21 2.2E-25 174.3 19.8 198 55-262 11-236 (519)
24 4f9z_D Endoplasmic reticulum r 99.9 1.3E-19 4.6E-24 149.2 23.2 190 52-250 5-212 (227)
25 3h79_A Thioredoxin-like protei 99.8 4.3E-20 1.5E-24 138.2 12.6 102 55-157 14-126 (127)
26 3zzx_A Thioredoxin; oxidoreduc 99.8 1.1E-19 3.8E-24 131.3 12.2 96 58-157 2-104 (105)
27 2hls_A Protein disulfide oxido 99.8 2.1E-19 7.2E-24 149.5 15.3 146 6-160 75-227 (243)
28 3zzx_A Thioredoxin; oxidoreduc 99.8 1.1E-18 3.8E-23 126.0 13.3 83 164-248 4-92 (105)
29 2dj1_A Protein disulfide-isome 99.8 9E-19 3.1E-23 133.1 11.7 106 55-161 16-126 (140)
30 3uvt_A Thioredoxin domain-cont 99.8 1.5E-18 5.1E-23 126.2 12.2 101 55-157 4-110 (111)
31 2qgv_A Hydrogenase-1 operon pr 99.8 1E-18 3.4E-23 131.1 11.4 101 58-159 19-125 (140)
32 3gnj_A Thioredoxin domain prot 99.8 2.6E-18 9E-23 125.0 12.7 100 57-158 5-109 (111)
33 2c0g_A ERP29 homolog, windbeut 99.8 2.1E-18 7E-23 142.9 13.4 142 54-208 14-174 (248)
34 3tco_A Thioredoxin (TRXA-1); d 99.8 2.9E-18 1E-22 124.2 12.5 101 56-158 4-108 (109)
35 1x5e_A Thioredoxin domain cont 99.8 1.6E-18 5.5E-23 129.3 11.2 102 55-159 6-110 (126)
36 2qsi_A Putative hydrogenase ex 99.8 1.9E-18 6.5E-23 129.1 11.3 99 58-158 17-122 (137)
37 3qfa_C Thioredoxin; protein-pr 99.8 3.4E-18 1.2E-22 125.8 12.6 99 55-157 11-115 (116)
38 2voc_A Thioredoxin; electron t 99.8 2.1E-18 7.3E-23 126.0 10.7 102 58-162 3-108 (112)
39 2av4_A Thioredoxin-like protei 99.8 1.9E-18 6.3E-23 131.2 10.4 100 58-158 23-138 (160)
40 1mek_A Protein disulfide isome 99.8 1E-18 3.6E-23 128.7 8.7 106 55-161 6-119 (120)
41 3die_A Thioredoxin, TRX; elect 99.8 6.8E-18 2.3E-22 121.6 11.8 98 57-157 4-105 (106)
42 1nsw_A Thioredoxin, TRX; therm 99.8 6.5E-18 2.2E-22 121.7 11.6 99 58-158 2-104 (105)
43 3p2a_A Thioredoxin 2, putative 99.8 8.9E-18 3.1E-22 128.9 12.6 106 52-159 34-143 (148)
44 2ppt_A Thioredoxin-2; thiredox 99.8 1E-17 3.5E-22 129.7 12.9 104 54-159 45-152 (155)
45 2trx_A Thioredoxin; electron t 99.8 8.2E-18 2.8E-22 121.8 11.5 100 56-157 2-106 (108)
46 2i4a_A Thioredoxin; acidophIle 99.8 1E-17 3.6E-22 120.9 12.0 100 56-157 2-106 (107)
47 3hz4_A Thioredoxin; NYSGXRC, P 99.8 7.4E-18 2.5E-22 128.2 11.6 102 56-159 6-112 (140)
48 2e0q_A Thioredoxin; electron t 99.8 1.2E-17 4E-22 119.8 11.8 98 58-158 1-102 (104)
49 2yzu_A Thioredoxin; redox prot 99.8 1.3E-17 4.3E-22 120.7 12.1 101 57-159 2-106 (109)
50 2l5l_A Thioredoxin; structural 99.8 1.5E-17 5.3E-22 125.8 13.0 102 56-159 9-126 (136)
51 3hxs_A Thioredoxin, TRXP; elec 99.7 1.3E-17 4.6E-22 126.7 12.6 102 55-158 21-138 (141)
52 2qsi_A Putative hydrogenase ex 99.7 7.9E-18 2.7E-22 125.7 10.9 90 161-251 15-111 (137)
53 2qgv_A Hydrogenase-1 operon pr 99.7 7.1E-18 2.4E-22 126.5 10.7 88 162-250 18-112 (140)
54 1x5d_A Protein disulfide-isome 99.7 5.8E-18 2E-22 127.3 10.3 104 55-159 6-117 (133)
55 3f3q_A Thioredoxin-1; His TAG, 99.7 1.7E-17 5.9E-22 120.6 12.4 98 56-157 7-108 (109)
56 2dml_A Protein disulfide-isome 99.7 7.5E-18 2.6E-22 126.3 10.2 103 55-159 16-124 (130)
57 3ga4_A Dolichyl-diphosphooligo 99.7 1.1E-17 3.9E-22 131.0 11.1 104 56-160 18-154 (178)
58 2wz9_A Glutaredoxin-3; protein 99.7 2.1E-17 7.3E-22 127.6 12.4 118 56-177 12-142 (153)
59 1ep7_A Thioredoxin CH1, H-type 99.7 3.2E-17 1.1E-21 119.4 12.7 99 57-158 3-110 (112)
60 3d6i_A Monothiol glutaredoxin- 99.7 2E-17 7E-22 120.6 11.6 99 58-158 2-108 (112)
61 1thx_A Thioredoxin, thioredoxi 99.7 3.2E-17 1.1E-21 119.8 12.7 102 55-158 6-112 (115)
62 1dby_A Chloroplast thioredoxin 99.7 3.7E-17 1.3E-21 118.1 12.7 99 58-158 3-106 (107)
63 2av4_A Thioredoxin-like protei 99.7 1.7E-17 5.8E-22 125.9 11.2 79 164-243 25-108 (160)
64 3aps_A DNAJ homolog subfamily 99.7 1.7E-17 5.9E-22 122.9 11.0 102 56-159 3-113 (122)
65 1zma_A Bacterocin transport ac 99.7 2.5E-17 8.6E-22 121.4 11.6 96 58-155 14-117 (118)
66 1t00_A Thioredoxin, TRX; redox 99.7 3.1E-17 1E-21 119.6 11.8 101 56-158 5-110 (112)
67 1w4v_A Thioredoxin, mitochondr 99.7 3.9E-17 1.3E-21 120.6 12.3 102 55-158 12-118 (119)
68 2o8v_B Thioredoxin 1; disulfid 99.7 1.5E-17 5.2E-22 124.5 9.8 102 55-158 21-127 (128)
69 1syr_A Thioredoxin; SGPP, stru 99.7 5.5E-17 1.9E-21 118.4 12.6 100 55-158 8-111 (112)
70 4euy_A Uncharacterized protein 99.7 4.6E-18 1.6E-22 122.7 6.7 94 62-158 7-104 (105)
71 3apq_A DNAJ homolog subfamily 99.7 3.3E-17 1.1E-21 133.3 12.6 107 55-163 96-206 (210)
72 2oe3_A Thioredoxin-3; electron 99.7 4.1E-17 1.4E-21 119.6 11.9 100 53-156 9-113 (114)
73 1r26_A Thioredoxin; redox-acti 99.7 4.4E-17 1.5E-21 121.5 12.1 99 56-158 19-122 (125)
74 3h79_A Thioredoxin-like protei 99.7 2.4E-17 8.1E-22 123.2 10.5 100 160-261 14-124 (127)
75 2pu9_C TRX-F, thioredoxin F-ty 99.7 6.7E-17 2.3E-21 117.7 12.3 99 55-157 4-109 (111)
76 2l6c_A Thioredoxin; oxidoreduc 99.7 5.2E-17 1.8E-21 118.2 11.3 99 57-159 4-106 (110)
77 3gnj_A Thioredoxin domain prot 99.7 1.2E-16 4.2E-21 116.0 13.3 89 161-250 4-97 (111)
78 2vlu_A Thioredoxin, thioredoxi 99.7 9.6E-17 3.3E-21 118.8 12.9 99 56-158 13-119 (122)
79 2b5e_A Protein disulfide-isome 99.7 5.4E-17 1.9E-21 148.9 14.0 151 8-160 282-468 (504)
80 1gh2_A Thioredoxin-like protei 99.7 9.3E-17 3.2E-21 116.1 12.4 96 58-157 3-105 (107)
81 2dj0_A Thioredoxin-related tra 99.7 4.3E-18 1.5E-22 129.0 5.3 102 55-157 6-119 (137)
82 3dxb_A Thioredoxin N-terminall 99.7 5.5E-17 1.9E-21 133.1 12.2 106 52-159 8-118 (222)
83 4f9z_D Endoplasmic reticulum r 99.7 1.9E-16 6.6E-21 130.2 15.5 149 2-158 59-224 (227)
84 2xc2_A Thioredoxinn; oxidoredu 99.7 8.7E-17 3E-21 118.2 12.0 95 58-157 15-116 (117)
85 1fb6_A Thioredoxin M; electron 99.7 7.6E-17 2.6E-21 115.9 11.4 98 58-157 2-104 (105)
86 3m9j_A Thioredoxin; oxidoreduc 99.7 1.3E-16 4.4E-21 114.7 12.6 95 59-157 3-104 (105)
87 1xwb_A Thioredoxin; dimerizati 99.7 1.3E-16 4.4E-21 114.9 12.5 97 58-157 2-105 (106)
88 1x5e_A Thioredoxin domain cont 99.7 5E-17 1.7E-21 121.2 10.4 114 160-278 6-123 (126)
89 2vim_A Thioredoxin, TRX; thior 99.7 1.5E-16 5.1E-21 114.1 12.4 95 59-157 2-103 (104)
90 3tco_A Thioredoxin (TRXA-1); d 99.7 1.5E-16 5.2E-21 115.0 12.5 89 161-250 4-96 (109)
91 3emx_A Thioredoxin; structural 99.7 8.9E-17 3.1E-21 121.4 11.4 102 55-160 15-127 (135)
92 2i1u_A Thioredoxin, TRX, MPT46 99.7 1E-16 3.6E-21 118.3 11.4 101 56-158 12-117 (121)
93 2djj_A PDI, protein disulfide- 99.7 2.3E-17 7.7E-22 122.0 7.7 102 55-159 6-117 (121)
94 1faa_A Thioredoxin F; electron 99.7 1.7E-16 5.9E-21 117.8 12.5 99 55-157 17-122 (124)
95 2dj3_A Protein disulfide-isome 99.7 1.8E-17 6.1E-22 124.7 6.8 104 55-159 6-118 (133)
96 1xfl_A Thioredoxin H1; AT3G510 99.7 2.5E-16 8.4E-21 117.2 12.9 100 55-158 15-123 (124)
97 3qou_A Protein YBBN; thioredox 99.7 5.8E-17 2E-21 138.0 10.6 103 55-159 6-114 (287)
98 3gix_A Thioredoxin-like protei 99.7 1.5E-16 5E-21 122.3 11.9 95 61-157 9-119 (149)
99 3uvt_A Thioredoxin domain-cont 99.7 2.6E-16 8.8E-21 114.3 12.4 99 161-262 5-109 (111)
100 1oaz_A Thioredoxin 1; immune s 99.7 2E-17 6.9E-22 123.0 6.4 102 55-158 2-122 (123)
101 2qc7_A ERP31, ERP28, endoplasm 99.7 1.6E-16 5.5E-21 131.1 12.4 98 56-158 5-118 (240)
102 2j23_A Thioredoxin; immune pro 99.7 1.2E-16 4.1E-21 118.3 10.4 99 58-158 17-120 (121)
103 3qfa_C Thioredoxin; protein-pr 99.7 3.3E-16 1.1E-20 115.1 12.5 87 160-248 11-103 (116)
104 3evi_A Phosducin-like protein 99.7 1.5E-16 5E-21 117.1 10.3 86 57-144 4-93 (118)
105 2voc_A Thioredoxin; electron t 99.7 2.9E-16 9.7E-21 114.6 11.7 96 163-262 3-102 (112)
106 1v98_A Thioredoxin; oxidoreduc 99.7 2.1E-16 7.3E-21 120.0 11.0 101 56-158 33-137 (140)
107 3ul3_B Thioredoxin, thioredoxi 99.7 5.7E-17 2E-21 121.3 7.7 97 58-156 27-127 (128)
108 2dj1_A Protein disulfide-isome 99.7 2.7E-16 9.4E-21 119.2 11.1 100 161-262 17-121 (140)
109 3f3q_A Thioredoxin-1; His TAG, 99.7 6.1E-16 2.1E-20 112.3 12.3 86 162-249 8-97 (109)
110 3die_A Thioredoxin, TRX; elect 99.7 4.7E-16 1.6E-20 111.9 11.5 87 162-250 4-94 (106)
111 2h8l_A Protein disulfide-isome 99.7 1.2E-14 4.2E-19 121.3 21.7 213 58-280 8-245 (252)
112 3evi_A Phosducin-like protein 99.7 3.8E-16 1.3E-20 114.8 11.0 98 163-263 5-111 (118)
113 3hz4_A Thioredoxin; NYSGXRC, P 99.7 3.7E-16 1.3E-20 118.8 11.3 90 160-250 5-99 (140)
114 1nsw_A Thioredoxin, TRX; therm 99.7 5E-16 1.7E-20 111.6 11.4 86 164-250 3-92 (105)
115 2yzu_A Thioredoxin; redox prot 99.7 8E-16 2.7E-20 111.1 12.5 87 163-250 3-93 (109)
116 3d6i_A Monothiol glutaredoxin- 99.7 7E-16 2.4E-20 112.3 11.8 85 165-249 4-96 (112)
117 2es7_A Q8ZP25_salty, putative 99.7 1.1E-16 3.6E-21 121.9 7.6 102 58-162 19-128 (142)
118 1x5d_A Protein disulfide-isome 99.7 6.6E-16 2.3E-20 115.9 12.0 90 160-250 6-104 (133)
119 3ed3_A Protein disulfide-isome 99.7 4.3E-16 1.5E-20 133.3 12.3 110 160-273 16-149 (298)
120 2vm1_A Thioredoxin, thioredoxi 99.7 9.8E-16 3.4E-20 112.5 12.5 99 57-159 7-114 (118)
121 2ppt_A Thioredoxin-2; thiredox 99.7 7.8E-16 2.7E-20 119.0 12.4 88 162-250 48-139 (155)
122 2f51_A Thioredoxin; electron t 99.7 9E-16 3.1E-20 113.1 12.2 99 57-159 4-113 (118)
123 1ti3_A Thioredoxin H, PTTRXH1; 99.7 7.2E-16 2.5E-20 112.3 11.5 97 58-158 6-111 (113)
124 1qgv_A Spliceosomal protein U5 99.7 3.9E-16 1.3E-20 118.9 10.4 95 62-157 10-119 (142)
125 1syr_A Thioredoxin; SGPP, stru 99.7 1.7E-15 5.7E-20 110.4 13.4 87 160-248 8-98 (112)
126 4euy_A Uncharacterized protein 99.7 1.1E-16 3.7E-21 115.4 6.9 83 166-250 6-92 (105)
127 1w4v_A Thioredoxin, mitochondr 99.7 1.4E-15 4.7E-20 112.2 12.6 91 159-250 11-106 (119)
128 1gh2_A Thioredoxin-like protei 99.7 1.2E-15 4.2E-20 110.1 12.1 84 164-249 5-94 (107)
129 2trx_A Thioredoxin; electron t 99.7 6.9E-16 2.4E-20 111.5 10.8 88 162-250 3-95 (108)
130 2i4a_A Thioredoxin; acidophIle 99.7 1.1E-15 3.6E-20 110.2 11.5 88 162-250 3-95 (107)
131 3p2a_A Thioredoxin 2, putative 99.7 7.8E-16 2.7E-20 118.0 11.4 90 160-250 37-130 (148)
132 2e0q_A Thioredoxin; electron t 99.7 1.5E-15 5.2E-20 108.6 12.1 85 164-250 2-90 (104)
133 1zma_A Bacterocin transport ac 99.7 7.5E-16 2.6E-20 113.4 10.8 88 162-250 13-108 (118)
134 2l57_A Uncharacterized protein 99.7 3.1E-16 1.1E-20 116.8 8.7 101 58-160 6-118 (126)
135 3apq_A DNAJ homolog subfamily 99.7 5.9E-16 2E-20 125.8 10.9 110 160-273 96-209 (210)
136 1r26_A Thioredoxin; redox-acti 99.7 1.5E-15 5.2E-20 113.1 12.1 83 163-247 21-108 (125)
137 2oe3_A Thioredoxin-3; electron 99.6 3.1E-15 1.1E-19 109.5 13.2 85 163-249 15-103 (114)
138 3m9j_A Thioredoxin; oxidoreduc 99.6 3.6E-15 1.2E-19 107.0 13.2 82 165-248 5-92 (105)
139 3hxs_A Thioredoxin, TRXP; elec 99.6 1.3E-15 4.5E-20 115.6 11.3 91 160-251 21-127 (141)
140 2l6c_A Thioredoxin; oxidoreduc 99.6 1.4E-15 4.7E-20 110.6 10.6 86 162-250 4-93 (110)
141 2dbc_A PDCL2, unnamed protein 99.6 1.2E-15 4.2E-20 115.2 10.6 100 55-157 9-119 (135)
142 1ep7_A Thioredoxin CH1, H-type 99.6 4.3E-15 1.5E-19 108.0 13.2 83 165-248 7-97 (112)
143 2l5l_A Thioredoxin; structural 99.6 1.7E-15 5.8E-20 114.5 11.3 89 161-250 9-113 (136)
144 1dby_A Chloroplast thioredoxin 99.6 2.4E-15 8.1E-20 108.5 11.5 87 163-250 3-94 (107)
145 3cxg_A Putative thioredoxin; m 99.6 1.4E-15 4.8E-20 114.5 10.7 99 56-159 20-129 (133)
146 3d22_A TRXH4, thioredoxin H-ty 99.6 2.8E-15 9.5E-20 113.6 12.4 99 57-159 25-132 (139)
147 1t00_A Thioredoxin, TRX; redox 99.6 2.4E-15 8.3E-20 109.4 11.3 89 161-250 5-98 (112)
148 1thx_A Thioredoxin, thioredoxi 99.6 2.9E-15 1E-19 109.3 11.7 89 161-250 7-100 (115)
149 3gix_A Thioredoxin-like protei 99.6 3.3E-15 1.1E-19 114.7 12.6 78 165-243 8-90 (149)
150 2vlu_A Thioredoxin, thioredoxi 99.6 6E-15 2E-19 109.0 13.5 88 160-249 12-107 (122)
151 1xwb_A Thioredoxin; dimerizati 99.6 6E-15 2E-19 106.0 13.0 82 165-247 4-92 (106)
152 2dj0_A Thioredoxin-related tra 99.6 9E-16 3.1E-20 116.1 8.9 91 160-250 6-108 (137)
153 2pu9_C TRX-F, thioredoxin F-ty 99.6 2.7E-15 9.1E-20 109.1 10.9 87 161-249 5-98 (111)
154 1fb6_A Thioredoxin M; electron 99.6 3.2E-15 1.1E-19 107.3 11.1 87 163-250 2-93 (105)
155 2wz9_A Glutaredoxin-3; protein 99.6 1E-14 3.4E-19 112.5 14.5 85 162-248 14-104 (153)
156 2o8v_B Thioredoxin 1; disulfid 99.6 1.5E-15 5.2E-20 113.5 9.2 88 162-250 23-115 (128)
157 2djk_A PDI, protein disulfide- 99.6 4.9E-15 1.7E-19 111.5 12.0 99 58-159 8-115 (133)
158 3ul3_B Thioredoxin, thioredoxi 99.6 1E-15 3.5E-20 114.4 7.7 84 166-250 30-117 (128)
159 1faa_A Thioredoxin F; electron 99.6 5.5E-15 1.9E-19 109.6 11.6 88 160-249 17-111 (124)
160 3qou_A Protein YBBN; thioredox 99.6 1.8E-15 6.1E-20 128.7 10.0 90 160-250 6-101 (287)
161 1qgv_A Spliceosomal protein U5 99.6 6.9E-15 2.4E-19 112.0 12.1 79 165-244 8-91 (142)
162 2dml_A Protein disulfide-isome 99.6 1.2E-15 4E-20 114.2 7.6 99 161-262 17-121 (130)
163 2i1u_A Thioredoxin, TRX, MPT46 99.6 7E-15 2.4E-19 108.4 11.7 89 161-250 12-105 (121)
164 3aps_A DNAJ homolog subfamily 99.6 2E-15 7E-20 111.6 8.6 88 160-248 2-94 (122)
165 1xfl_A Thioredoxin H1; AT3G510 99.6 1.5E-14 5.1E-19 107.5 13.4 85 162-248 18-110 (124)
166 3qcp_A QSOX from trypanosoma b 99.6 5E-16 1.7E-20 138.9 6.2 103 55-159 22-139 (470)
167 1mek_A Protein disulfide isome 99.6 1.4E-15 4.8E-20 111.8 7.4 100 160-261 6-113 (120)
168 3dxb_A Thioredoxin N-terminall 99.6 5.5E-15 1.9E-19 121.1 11.4 100 160-262 11-115 (222)
169 1v98_A Thioredoxin; oxidoreduc 99.6 9.3E-15 3.2E-19 110.8 11.9 89 161-250 33-125 (140)
170 2xc2_A Thioredoxinn; oxidoredu 99.6 1.2E-14 4E-19 106.7 11.9 82 163-247 15-103 (117)
171 2f51_A Thioredoxin; electron t 99.6 1.2E-14 4.2E-19 107.0 11.9 82 167-250 11-101 (118)
172 3ga4_A Dolichyl-diphosphooligo 99.6 2.9E-15 1E-19 117.3 8.9 81 160-241 17-114 (178)
173 2trc_P Phosducin, MEKA, PP33; 99.6 2.8E-15 9.6E-20 122.2 8.7 101 55-157 98-211 (217)
174 2vim_A Thioredoxin, TRX; thior 99.6 2.2E-14 7.5E-19 102.6 12.4 79 167-247 6-90 (104)
175 2j23_A Thioredoxin; immune pro 99.6 7.6E-15 2.6E-19 108.5 10.1 88 161-248 16-107 (121)
176 2vm1_A Thioredoxin, thioredoxi 99.6 3.4E-14 1.2E-18 104.1 13.3 85 162-248 8-100 (118)
177 1ti3_A Thioredoxin H, PTTRXH1; 99.6 4E-14 1.4E-18 102.9 13.4 84 162-247 6-97 (113)
178 2fwh_A Thiol:disulfide interch 99.6 1.4E-14 4.7E-19 109.1 11.0 96 60-158 16-127 (134)
179 3ec3_A Protein disulfide-isome 99.6 5.3E-13 1.8E-17 111.2 21.6 211 58-280 8-243 (250)
180 3d22_A TRXH4, thioredoxin H-ty 99.6 4.6E-14 1.6E-18 106.8 13.8 86 161-248 25-118 (139)
181 2yj7_A LPBCA thioredoxin; oxid 99.4 1.7E-16 5.7E-21 114.0 0.0 98 58-157 3-105 (106)
182 2dbc_A PDCL2, unnamed protein 99.6 2.6E-14 8.9E-19 107.8 11.4 87 161-249 10-100 (135)
183 2kuc_A Putative disulphide-iso 99.6 9.9E-15 3.4E-19 109.1 8.9 101 58-160 8-122 (130)
184 3emx_A Thioredoxin; structural 99.6 2.4E-14 8.2E-19 108.0 11.0 86 160-250 15-113 (135)
185 1oaz_A Thioredoxin 1; immune s 99.6 2.5E-15 8.4E-20 111.6 5.1 88 162-250 4-110 (123)
186 3kp8_A Vkorc1/thioredoxin doma 99.6 7E-15 2.4E-19 106.1 7.3 76 73-158 12-94 (106)
187 2es7_A Q8ZP25_salty, putative 99.6 1.9E-15 6.5E-20 114.9 4.5 87 162-250 18-112 (142)
188 1wou_A Thioredoxin -related pr 99.6 2.5E-14 8.4E-19 106.1 10.2 97 57-156 6-122 (123)
189 2dj3_A Protein disulfide-isome 99.5 4.8E-15 1.6E-19 111.3 6.1 101 160-262 6-115 (133)
190 2trc_P Phosducin, MEKA, PP33; 99.5 2.7E-14 9.2E-19 116.3 10.6 87 162-250 100-193 (217)
191 2djk_A PDI, protein disulfide- 99.5 3.9E-14 1.3E-18 106.6 10.8 115 162-280 7-130 (133)
192 3iv4_A Putative oxidoreductase 99.5 3.8E-14 1.3E-18 101.7 10.1 93 58-154 8-111 (112)
193 1a0r_P Phosducin, MEKA, PP33; 99.5 1.6E-14 5.5E-19 119.4 9.3 100 55-157 111-224 (245)
194 1wmj_A Thioredoxin H-type; str 99.5 2.4E-15 8.3E-20 112.3 4.0 100 56-159 14-122 (130)
195 2djj_A PDI, protein disulfide- 99.5 5.4E-15 1.8E-19 109.1 4.9 100 160-263 6-115 (121)
196 3iv4_A Putative oxidoreductase 99.5 6.3E-14 2.1E-18 100.5 10.2 77 164-243 10-94 (112)
197 3fk8_A Disulphide isomerase; A 99.5 6.2E-14 2.1E-18 105.2 9.6 87 68-156 24-130 (133)
198 3cxg_A Putative thioredoxin; m 99.5 8.3E-14 2.8E-18 104.7 10.2 84 162-248 22-115 (133)
199 2l57_A Uncharacterized protein 99.5 3.6E-14 1.2E-18 105.5 7.7 86 174-262 22-114 (126)
200 2qc7_A ERP31, ERP28, endoplasm 99.5 1.7E-13 5.7E-18 113.0 12.1 97 161-263 5-117 (240)
201 1nho_A Probable thioredoxin; b 99.5 5.4E-14 1.9E-18 96.8 7.7 79 75-158 3-84 (85)
202 1fo5_A Thioredoxin; disulfide 99.5 3.8E-14 1.3E-18 97.6 6.7 79 74-157 3-84 (85)
203 1a0r_P Phosducin, MEKA, PP33; 99.5 7.2E-14 2.5E-18 115.5 9.5 86 162-249 113-205 (245)
204 1ilo_A Conserved hypothetical 99.5 1.6E-13 5.4E-18 92.7 9.1 73 77-154 3-76 (77)
205 3q6o_A Sulfhydryl oxidase 1; p 99.5 1.4E-13 4.8E-18 114.3 10.3 81 160-240 11-99 (244)
206 2c0g_A ERP29 homolog, windbeut 99.5 3.5E-13 1.2E-17 111.4 11.3 98 160-264 15-131 (248)
207 2fwh_A Thiol:disulfide interch 99.5 2.9E-13 1E-17 101.8 9.7 84 165-250 16-115 (134)
208 1hyu_A AHPF, alkyl hydroperoxi 99.5 1.4E-11 4.8E-16 113.2 22.9 172 73-261 18-196 (521)
209 3fk8_A Disulphide isomerase; A 99.4 4.9E-13 1.7E-17 100.2 9.8 73 174-247 25-110 (133)
210 2yj7_A LPBCA thioredoxin; oxid 99.2 1E-14 3.4E-19 104.6 0.0 87 163-250 3-94 (106)
211 3f9u_A Putative exported cytoc 99.4 2.6E-13 9E-18 106.4 7.6 98 60-158 30-165 (172)
212 1wou_A Thioredoxin -related pr 99.4 9.7E-13 3.3E-17 97.4 10.2 81 162-243 6-105 (123)
213 1sen_A Thioredoxin-like protei 99.4 5E-13 1.7E-17 104.2 8.1 94 64-158 37-147 (164)
214 3dml_A Putative uncharacterize 99.4 1.4E-13 4.8E-18 100.0 4.5 86 72-158 17-109 (116)
215 1wmj_A Thioredoxin H-type; str 99.4 6.3E-14 2.2E-18 104.5 2.3 84 163-248 16-108 (130)
216 2lst_A Thioredoxin; structural 99.1 2.4E-14 8.3E-19 107.0 0.0 95 63-159 9-116 (130)
217 1fo5_A Thioredoxin; disulfide 99.4 9E-13 3.1E-17 90.6 7.5 68 179-250 3-73 (85)
218 2kuc_A Putative disulphide-iso 99.4 8.7E-13 3E-17 98.4 7.9 83 167-250 12-108 (130)
219 3ph9_A Anterior gradient prote 99.4 1.1E-12 3.9E-17 100.3 8.1 80 64-143 35-120 (151)
220 1ilo_A Conserved hypothetical 99.4 3.3E-12 1.1E-16 86.1 9.3 65 181-249 2-66 (77)
221 3kp8_A Vkorc1/thioredoxin doma 99.4 9.6E-13 3.3E-17 94.8 6.9 65 178-251 12-83 (106)
222 1nho_A Probable thioredoxin; b 99.4 1.4E-12 4.9E-17 89.6 7.3 66 181-250 4-72 (85)
223 3qcp_A QSOX from trypanosoma b 99.3 3E-13 1E-17 121.0 3.9 92 161-252 23-129 (470)
224 3t58_A Sulfhydryl oxidase 1; o 99.3 2.9E-12 1E-16 117.1 10.5 91 160-250 11-114 (519)
225 2h8l_A Protein disulfide-isome 99.3 1.3E-11 4.5E-16 102.8 13.5 151 2-161 57-232 (252)
226 2ju5_A Thioredoxin disulfide i 99.3 3.7E-12 1.3E-16 98.1 9.4 86 70-158 44-151 (154)
227 1z6n_A Hypothetical protein PA 99.3 2.1E-12 7.2E-17 100.7 8.0 93 60-156 40-140 (167)
228 1lu4_A Soluble secreted antige 99.3 4.2E-12 1.4E-16 95.0 9.0 83 72-157 23-134 (136)
229 2h30_A Thioredoxin, peptide me 99.3 4E-12 1.4E-16 98.5 8.8 101 58-159 23-156 (164)
230 1zzo_A RV1677; thioredoxin fol 99.3 6.1E-12 2.1E-16 94.0 9.0 84 72-158 24-134 (136)
231 2b5x_A YKUV protein, TRXY; thi 99.3 1.6E-11 5.3E-16 93.2 11.4 96 61-158 17-144 (148)
232 3erw_A Sporulation thiol-disul 99.3 9.2E-12 3.1E-16 94.1 9.8 82 72-154 33-144 (145)
233 3dml_A Putative uncharacterize 99.3 5.2E-12 1.8E-16 91.6 7.9 79 177-260 17-105 (116)
234 3raz_A Thioredoxin-related pro 99.3 1.9E-11 6.5E-16 93.5 10.7 87 72-159 23-140 (151)
235 3kp9_A Vkorc1/thioredoxin doma 99.3 2E-12 7E-17 109.0 5.6 90 64-162 190-283 (291)
236 1z6n_A Hypothetical protein PA 99.3 1.6E-11 5.6E-16 95.6 10.2 83 166-250 41-131 (167)
237 2fgx_A Putative thioredoxin; N 99.3 1.6E-11 5.6E-16 87.8 8.9 76 75-154 30-106 (107)
238 2lst_A Thioredoxin; structural 98.9 3.4E-13 1.2E-17 100.7 0.0 81 169-250 10-103 (130)
239 3ec3_A Protein disulfide-isome 99.3 9.6E-11 3.3E-15 97.5 14.8 152 1-162 57-231 (250)
240 2ju5_A Thioredoxin disulfide i 99.3 3E-11 1E-15 92.9 10.9 73 175-249 44-136 (154)
241 1nm3_A Protein HI0572; hybrid, 99.3 1.2E-10 4E-15 96.4 14.9 146 72-242 32-229 (241)
242 2f9s_A Thiol-disulfide oxidore 99.3 3.3E-11 1.1E-15 92.1 10.1 87 72-159 25-138 (151)
243 2l5o_A Putative thioredoxin; s 99.3 3.5E-11 1.2E-15 92.0 10.2 87 72-159 27-141 (153)
244 3ira_A Conserved protein; meth 99.2 1.2E-11 4.1E-16 96.6 7.4 78 60-138 26-118 (173)
245 3or5_A Thiol:disulfide interch 99.2 3.6E-11 1.2E-15 93.1 10.0 87 72-159 33-151 (165)
246 1sen_A Thioredoxin-like protei 99.2 5.3E-12 1.8E-16 98.3 4.9 80 169-248 37-123 (164)
247 3f9u_A Putative exported cytoc 99.2 1.5E-11 5.2E-16 96.3 7.5 83 167-250 32-152 (172)
248 3ph9_A Anterior gradient prote 99.2 8.3E-12 2.8E-16 95.5 5.7 79 170-248 36-120 (151)
249 4evm_A Thioredoxin family prot 99.2 8.1E-11 2.8E-15 87.7 10.9 83 72-156 21-136 (138)
250 3ira_A Conserved protein; meth 99.2 3.8E-11 1.3E-15 93.8 9.0 90 153-243 13-118 (173)
251 1ttz_A Conserved hypothetical 99.2 4.1E-11 1.4E-15 82.7 8.1 73 77-158 3-76 (87)
252 3eyt_A Uncharacterized protein 99.2 8E-11 2.7E-15 90.5 10.3 87 72-159 27-152 (158)
253 2lja_A Putative thiol-disulfid 99.2 5.1E-11 1.7E-15 91.0 8.8 87 72-159 29-143 (152)
254 3lor_A Thiol-disulfide isomera 99.2 1.1E-10 3.7E-15 89.9 10.6 87 72-159 29-155 (160)
255 3erw_A Sporulation thiol-disul 99.2 1.4E-10 4.6E-15 87.6 10.7 74 177-250 33-136 (145)
256 3ia1_A THIO-disulfide isomeras 99.2 8.9E-11 3E-15 89.9 9.7 85 74-160 31-145 (154)
257 3fkf_A Thiol-disulfide oxidore 99.2 1.2E-10 4E-15 88.3 9.5 84 72-158 32-145 (148)
258 3gl3_A Putative thiol:disulfid 99.2 1.8E-10 6.1E-15 87.9 10.5 88 72-159 27-142 (152)
259 3hcz_A Possible thiol-disulfid 99.2 4.9E-11 1.7E-15 90.5 6.6 84 72-156 30-143 (148)
260 2b5x_A YKUV protein, TRXY; thi 99.2 2.2E-10 7.6E-15 86.7 10.2 73 177-250 28-132 (148)
261 3hdc_A Thioredoxin family prot 99.1 4.8E-10 1.6E-14 86.3 12.0 86 177-262 40-149 (158)
262 2f9s_A Thiol-disulfide oxidore 99.1 4.3E-10 1.5E-14 85.8 11.4 74 177-250 25-125 (151)
263 1lu4_A Soluble secreted antige 99.1 3.1E-10 1.1E-14 84.6 10.4 72 177-250 23-123 (136)
264 3eur_A Uncharacterized protein 99.1 9.4E-11 3.2E-15 88.6 7.4 82 72-155 30-141 (142)
265 3ewl_A Uncharacterized conserv 99.1 1.5E-10 5E-15 87.4 8.4 84 72-157 26-139 (142)
266 1hyu_A AHPF, alkyl hydroperoxi 99.1 7.8E-10 2.7E-14 101.6 14.8 133 16-157 60-198 (521)
267 3raz_A Thioredoxin-related pro 99.1 2.8E-10 9.7E-15 86.9 9.9 74 177-250 23-127 (151)
268 3kcm_A Thioredoxin family prot 99.1 3.6E-10 1.2E-14 86.4 10.4 86 72-158 27-142 (154)
269 2lrn_A Thiol:disulfide interch 99.1 4.6E-10 1.6E-14 85.8 10.5 83 72-157 28-139 (152)
270 3ha9_A Uncharacterized thiored 99.1 3.1E-10 1.1E-14 88.0 9.7 82 72-157 36-162 (165)
271 2h30_A Thioredoxin, peptide me 99.1 1E-10 3.5E-15 90.4 6.9 74 177-250 37-143 (164)
272 3hdc_A Thioredoxin family prot 99.1 4.1E-10 1.4E-14 86.7 10.2 88 72-159 40-152 (158)
273 2b1k_A Thiol:disulfide interch 99.1 3E-10 1E-14 88.3 9.3 85 71-158 49-159 (168)
274 3gl3_A Putative thiol:disulfid 99.1 8.8E-10 3E-14 84.0 11.8 84 177-260 27-137 (152)
275 1zzo_A RV1677; thioredoxin fol 99.1 8.6E-10 2.9E-14 82.1 10.6 72 177-250 24-122 (136)
276 1kng_A Thiol:disulfide interch 99.1 5.2E-10 1.8E-14 85.6 9.5 82 72-157 41-150 (156)
277 2fgx_A Putative thioredoxin; N 99.1 5.3E-10 1.8E-14 80.0 8.5 68 180-250 30-98 (107)
278 2lrt_A Uncharacterized protein 99.1 8.2E-10 2.8E-14 84.5 10.2 76 72-147 34-137 (152)
279 1o8x_A Tryparedoxin, TRYX, TXN 99.1 3.7E-10 1.2E-14 85.7 8.1 67 72-138 27-123 (146)
280 3or5_A Thiol:disulfide interch 99.1 1.2E-09 3.9E-14 84.5 11.0 74 177-250 33-138 (165)
281 3eyt_A Uncharacterized protein 99.1 1.4E-09 4.9E-14 83.4 11.4 73 178-250 28-139 (158)
282 1i5g_A Tryparedoxin II; electr 99.1 4E-10 1.4E-14 85.2 8.1 68 72-139 27-124 (144)
283 1o73_A Tryparedoxin; electron 99.1 4.4E-10 1.5E-14 84.9 8.1 68 72-139 27-124 (144)
284 3s9f_A Tryparedoxin; thioredox 99.1 6.9E-10 2.4E-14 86.2 9.4 66 72-137 47-142 (165)
285 2l5o_A Putative thioredoxin; s 99.1 1.1E-09 3.7E-14 83.6 10.3 74 177-250 27-128 (153)
286 3kcm_A Thioredoxin family prot 99.0 2.3E-09 7.9E-14 81.8 11.5 74 177-250 27-128 (154)
287 3kp9_A Vkorc1/thioredoxin doma 99.0 2.9E-10 9.8E-15 95.8 6.7 76 168-251 189-268 (291)
288 4evm_A Thioredoxin family prot 99.0 1.9E-09 6.6E-14 80.1 10.6 73 177-250 21-126 (138)
289 3lwa_A Secreted thiol-disulfid 99.0 1E-09 3.5E-14 86.5 9.4 86 72-158 58-180 (183)
290 3hcz_A Possible thiol-disulfid 99.0 6.3E-10 2.1E-14 84.2 7.6 73 177-249 30-132 (148)
291 2e7p_A Glutaredoxin; thioredox 99.0 5E-10 1.7E-14 81.6 6.7 83 64-156 11-105 (116)
292 2hyx_A Protein DIPZ; thioredox 99.0 9.1E-10 3.1E-14 95.8 9.2 86 72-158 81-198 (352)
293 3lor_A Thiol-disulfide isomera 99.0 3.2E-09 1.1E-13 81.5 11.3 74 177-250 29-142 (160)
294 1ttz_A Conserved hypothetical 99.0 9.8E-10 3.4E-14 75.8 7.4 61 182-250 3-64 (87)
295 1i5g_A Tryparedoxin II; electr 99.0 2E-09 6.8E-14 81.3 9.8 68 177-244 27-124 (144)
296 2lja_A Putative thiol-disulfid 99.0 1.1E-09 3.6E-14 83.5 8.3 74 177-250 29-130 (152)
297 2lrn_A Thiol:disulfide interch 99.0 4.7E-09 1.6E-13 80.1 11.8 67 177-243 28-123 (152)
298 3s9f_A Tryparedoxin; thioredox 99.0 2E-09 6.8E-14 83.6 9.8 68 177-244 47-144 (165)
299 2l4c_A Endoplasmic reticulum r 99.0 7.7E-09 2.6E-13 76.2 12.3 103 46-157 13-122 (124)
300 4fo5_A Thioredoxin-like protei 99.0 2E-09 6.7E-14 81.3 9.4 81 72-155 31-141 (143)
301 1o8x_A Tryparedoxin, TRYX, TXN 99.0 2.4E-09 8.3E-14 81.1 9.9 68 177-244 27-124 (146)
302 3kh7_A Thiol:disulfide interch 99.0 2.3E-09 7.9E-14 84.2 10.0 84 72-158 57-166 (176)
303 1o73_A Tryparedoxin; electron 99.0 1.9E-09 6.4E-14 81.4 8.9 70 177-246 27-126 (144)
304 2lrt_A Uncharacterized protein 99.0 2E-09 6.9E-14 82.3 9.1 76 177-252 34-137 (152)
305 3ia1_A THIO-disulfide isomeras 99.0 3.1E-09 1.1E-13 81.1 10.1 71 179-250 31-131 (154)
306 3fkf_A Thiol-disulfide oxidore 99.0 2.6E-09 8.8E-14 80.8 9.5 67 177-243 32-128 (148)
307 3fw2_A Thiol-disulfide oxidore 99.0 4.2E-09 1.4E-13 80.2 10.6 82 72-156 32-145 (150)
308 2dlx_A UBX domain-containing p 99.0 2.8E-09 9.6E-14 81.5 9.4 89 67-158 36-135 (153)
309 2ywi_A Hypothetical conserved 98.9 3.1E-09 1.1E-13 84.7 9.2 87 72-159 44-174 (196)
310 2k8s_A Thioredoxin; dimer, str 98.9 9.9E-10 3.4E-14 74.5 5.3 64 77-144 4-71 (80)
311 1jfu_A Thiol:disulfide interch 98.9 7.3E-09 2.5E-13 81.8 11.0 88 72-159 59-180 (186)
312 3ha9_A Uncharacterized thiored 98.9 6.5E-09 2.2E-13 80.4 9.9 70 177-249 36-149 (165)
313 2k8s_A Thioredoxin; dimer, str 98.9 2.1E-09 7.2E-14 72.9 5.9 64 182-249 4-71 (80)
314 3ewl_A Uncharacterized conserv 98.9 5.2E-09 1.8E-13 78.7 8.6 67 177-243 26-123 (142)
315 2lus_A Thioredoxion; CR-Trp16, 98.4 1.7E-10 5.9E-15 87.0 0.0 72 72-143 24-127 (143)
316 1kng_A Thiol:disulfide interch 98.9 8.7E-09 3E-13 78.7 9.6 70 178-250 42-139 (156)
317 2cvb_A Probable thiol-disulfid 98.9 4.9E-09 1.7E-13 83.0 8.2 85 72-159 32-159 (188)
318 3eur_A Uncharacterized protein 98.9 6.8E-09 2.3E-13 78.2 8.5 66 178-243 31-127 (142)
319 3u5r_E Uncharacterized protein 98.9 5.6E-09 1.9E-13 84.9 8.5 86 73-159 58-187 (218)
320 1jfu_A Thiol:disulfide interch 98.9 3.4E-08 1.1E-12 77.9 12.1 74 177-250 59-165 (186)
321 3lwa_A Secreted thiol-disulfid 98.8 1.4E-08 5E-13 79.9 9.9 74 177-250 58-168 (183)
322 2b1k_A Thiol:disulfide interch 98.8 1.6E-08 5.6E-13 78.3 9.5 72 177-250 50-147 (168)
323 1wjk_A C330018D20RIK protein; 98.8 7.5E-09 2.5E-13 73.4 6.9 78 73-158 15-95 (100)
324 1un2_A DSBA, thiol-disulfide i 98.8 1.7E-09 5.8E-14 86.5 3.7 102 7-113 40-155 (197)
325 3fw2_A Thiol-disulfide oxidore 98.8 3.7E-08 1.3E-12 74.8 11.1 67 177-243 32-130 (150)
326 2hyx_A Protein DIPZ; thioredox 98.8 2E-08 6.9E-13 87.3 10.2 73 178-250 82-186 (352)
327 2e7p_A Glutaredoxin; thioredox 98.8 1.4E-08 4.9E-13 73.7 7.9 68 171-247 13-89 (116)
328 4fo5_A Thioredoxin-like protei 98.8 2.7E-08 9.3E-13 75.0 9.4 66 178-243 32-127 (143)
329 3u5r_E Uncharacterized protein 98.8 4.2E-08 1.4E-12 79.7 10.5 70 178-248 58-161 (218)
330 2l4c_A Endoplasmic reticulum r 98.8 8.6E-08 2.9E-12 70.5 11.0 77 165-247 26-104 (124)
331 2lus_A Thioredoxion; CR-Trp16, 98.2 7.9E-10 2.7E-14 83.3 0.0 72 178-249 25-128 (143)
332 1un2_A DSBA, thiol-disulfide i 98.8 1.9E-09 6.5E-14 86.2 2.0 100 115-217 40-154 (197)
333 2k6v_A Putative cytochrome C o 98.7 1.4E-08 4.9E-13 78.8 6.7 84 72-156 34-170 (172)
334 2ls5_A Uncharacterized protein 98.2 1.1E-09 3.8E-14 84.2 0.0 83 72-156 32-145 (159)
335 1ego_A Glutaredoxin; electron 98.7 2.6E-08 8.8E-13 68.0 6.9 71 77-157 3-82 (85)
336 3kh7_A Thiol:disulfide interch 98.7 7.5E-08 2.6E-12 75.4 10.0 69 178-250 58-154 (176)
337 2ywi_A Hypothetical conserved 98.7 8E-08 2.7E-12 76.3 10.0 65 179-243 47-144 (196)
338 2cvb_A Probable thiol-disulfid 98.7 2.2E-07 7.6E-12 73.3 12.5 69 178-248 33-134 (188)
339 3drn_A Peroxiredoxin, bacterio 98.7 8.7E-08 3E-12 73.8 9.8 72 72-143 27-130 (161)
340 2ggt_A SCO1 protein homolog, m 98.7 3.7E-08 1.3E-12 75.8 7.7 86 72-158 22-160 (164)
341 2rli_A SCO2 protein homolog, m 98.7 5.4E-08 1.9E-12 75.5 8.6 86 72-158 25-163 (171)
342 3gyk_A 27KDA outer membrane pr 98.7 6.6E-08 2.3E-12 75.5 8.5 80 73-157 22-171 (175)
343 1ego_A Glutaredoxin; electron 98.7 9.9E-08 3.4E-12 65.0 8.4 58 182-243 3-69 (85)
344 1xvw_A Hypothetical protein RV 98.7 7.4E-08 2.5E-12 73.9 8.5 83 73-155 35-156 (160)
345 1eej_A Thiol:disulfide interch 98.7 4E-08 1.4E-12 79.7 7.3 79 73-157 86-209 (216)
346 2vup_A Glutathione peroxidase- 98.7 1E-07 3.5E-12 75.6 9.3 86 72-158 47-184 (190)
347 2dlx_A UBX domain-containing p 98.7 1.6E-07 5.6E-12 71.6 9.9 73 174-247 38-121 (153)
348 3cmi_A Peroxiredoxin HYR1; thi 98.7 5.6E-08 1.9E-12 75.6 7.5 85 72-158 31-167 (171)
349 2p5q_A Glutathione peroxidase 98.6 1E-07 3.5E-12 73.8 8.8 86 72-158 31-167 (170)
350 3drn_A Peroxiredoxin, bacterio 98.6 1.9E-07 6.4E-12 71.9 10.0 72 178-249 28-131 (161)
351 2ls5_A Uncharacterized protein 98.0 4.4E-09 1.5E-13 80.8 0.0 71 177-247 32-133 (159)
352 1t3b_A Thiol:disulfide interch 98.6 6.4E-08 2.2E-12 78.2 6.9 76 73-156 86-208 (211)
353 2bmx_A Alkyl hydroperoxidase C 98.6 1.4E-07 4.8E-12 75.1 7.9 86 72-158 44-169 (195)
354 2v1m_A Glutathione peroxidase; 98.6 2.9E-07 1E-11 71.1 9.5 41 72-112 30-70 (169)
355 1xvw_A Hypothetical protein RV 98.6 2.6E-07 9E-12 70.8 9.1 72 179-250 37-143 (160)
356 1we0_A Alkyl hydroperoxide red 98.6 1.2E-07 4.2E-12 74.8 7.2 86 72-158 30-156 (187)
357 2p31_A CL683, glutathione pero 98.6 1.5E-07 5E-12 74.0 7.3 41 72-112 48-88 (181)
358 1wjk_A C330018D20RIK protein; 98.5 1.4E-07 4.8E-12 66.7 6.3 64 178-250 15-83 (100)
359 1zof_A Alkyl hydroperoxide-red 98.5 7.3E-08 2.5E-12 76.9 5.4 86 72-158 32-160 (198)
360 3dwv_A Glutathione peroxidase- 98.5 2.5E-07 8.4E-12 73.2 8.2 87 72-159 45-183 (187)
361 2obi_A PHGPX, GPX-4, phospholi 98.5 4.1E-07 1.4E-11 71.5 9.2 41 72-112 46-86 (183)
362 3kij_A Probable glutathione pe 98.5 4.6E-07 1.6E-11 71.0 8.8 41 72-112 37-77 (180)
363 2k6v_A Putative cytochrome C o 98.5 4.7E-07 1.6E-11 70.1 8.7 73 177-249 34-157 (172)
364 1we0_A Alkyl hydroperoxide red 98.5 5.4E-07 1.8E-11 71.1 8.5 72 178-249 31-139 (187)
365 1kte_A Thioltransferase; redox 98.5 4.2E-07 1.4E-11 64.6 7.1 68 64-137 3-78 (105)
366 2rli_A SCO2 protein homolog, m 98.5 7.1E-07 2.4E-11 69.0 9.0 73 178-250 26-151 (171)
367 2ggt_A SCO1 protein homolog, m 98.5 7.5E-07 2.6E-11 68.3 8.9 73 178-250 23-148 (164)
368 1qmv_A Human thioredoxin perox 98.4 4.7E-07 1.6E-11 72.1 7.8 85 72-157 33-161 (197)
369 2bmx_A Alkyl hydroperoxidase C 98.4 8.9E-07 3E-11 70.4 9.1 72 178-249 45-152 (195)
370 3cmi_A Peroxiredoxin HYR1; thi 98.4 1.2E-06 4.1E-11 68.0 9.6 40 177-217 31-70 (171)
371 1kte_A Thioltransferase; redox 98.4 6.1E-07 2.1E-11 63.8 7.1 68 170-243 4-79 (105)
372 2f8a_A Glutathione peroxidase 98.4 7.5E-07 2.6E-11 71.7 8.3 41 72-112 46-86 (208)
373 1v58_A Thiol:disulfide interch 98.4 1E-06 3.4E-11 72.6 8.4 81 74-158 98-232 (241)
374 1uul_A Tryparedoxin peroxidase 98.4 8.8E-07 3E-11 70.8 7.9 85 72-157 35-163 (202)
375 2p5q_A Glutathione peroxidase 98.4 2.7E-06 9.3E-11 65.6 10.3 41 177-217 31-71 (170)
376 2gs3_A PHGPX, GPX-4, phospholi 98.4 1.3E-06 4.5E-11 68.8 8.5 41 72-112 48-88 (185)
377 1zof_A Alkyl hydroperoxide-red 98.4 9.1E-07 3.1E-11 70.5 7.7 73 177-249 32-143 (198)
378 2v1m_A Glutathione peroxidase; 98.4 4.3E-06 1.5E-10 64.4 11.2 41 177-217 30-70 (169)
379 1zye_A Thioredoxin-dependent p 98.3 8.8E-07 3E-11 71.9 7.3 85 72-157 55-183 (220)
380 1r7h_A NRDH-redoxin; thioredox 98.3 2.8E-06 9.4E-11 56.1 8.4 67 77-154 3-73 (75)
381 2vup_A Glutathione peroxidase- 98.3 2.9E-06 1E-10 67.0 9.8 41 177-217 47-87 (190)
382 2a4v_A Peroxiredoxin DOT5; yea 98.3 4.1E-06 1.4E-10 64.1 10.3 77 67-144 29-137 (159)
383 1qmv_A Human thioredoxin perox 98.3 2.9E-06 1E-10 67.4 9.4 72 178-249 34-145 (197)
384 1h75_A Glutaredoxin-like prote 98.3 1.4E-06 4.8E-11 58.7 6.4 69 77-156 3-75 (81)
385 2h01_A 2-Cys peroxiredoxin; th 98.3 1.2E-06 4.2E-11 69.3 6.8 84 72-156 30-156 (192)
386 3gyk_A 27KDA outer membrane pr 98.3 2.5E-06 8.5E-11 66.4 8.2 32 178-209 22-53 (175)
387 2i81_A 2-Cys peroxiredoxin; st 98.3 1.7E-06 6E-11 69.8 7.4 84 72-156 51-177 (213)
388 1eej_A Thiol:disulfide interch 98.3 1.6E-06 5.4E-11 70.2 6.7 66 178-250 86-198 (216)
389 3gkn_A Bacterioferritin comigr 98.2 3.7E-06 1.3E-10 64.5 8.4 85 72-156 34-159 (163)
390 2b7k_A SCO1 protein; metalloch 98.2 3E-06 1E-10 67.6 7.9 85 72-157 40-177 (200)
391 2p31_A CL683, glutathione pero 98.2 3.9E-06 1.3E-10 65.8 8.4 41 177-217 48-88 (181)
392 3ztl_A Thioredoxin peroxidase; 98.2 3.6E-06 1.2E-10 68.4 8.3 85 72-156 68-195 (222)
393 1t3b_A Thiol:disulfide interch 98.2 1.4E-06 4.9E-11 70.2 5.8 66 178-250 86-198 (211)
394 2cq9_A GLRX2 protein, glutared 98.2 7.6E-06 2.6E-10 60.6 9.1 67 62-137 16-90 (130)
395 2h01_A 2-Cys peroxiredoxin; th 98.2 5.2E-06 1.8E-10 65.7 8.7 72 177-248 30-140 (192)
396 2obi_A PHGPX, GPX-4, phospholi 98.2 8.6E-06 2.9E-10 63.8 9.9 41 177-217 46-86 (183)
397 3gkn_A Bacterioferritin comigr 98.2 9.8E-06 3.4E-10 62.1 9.7 70 178-247 35-143 (163)
398 2a4v_A Peroxiredoxin DOT5; yea 98.2 1.5E-05 5.1E-10 60.9 10.6 70 178-249 35-137 (159)
399 3dwv_A Glutathione peroxidase- 98.2 4.2E-06 1.4E-10 66.0 7.6 41 177-217 45-85 (187)
400 3kij_A Probable glutathione pe 98.2 9.1E-06 3.1E-10 63.5 9.5 41 177-217 37-77 (180)
401 2gs3_A PHGPX, GPX-4, phospholi 98.2 1.2E-05 4.1E-10 63.2 10.2 41 177-217 48-88 (185)
402 1zye_A Thioredoxin-dependent p 98.2 7.8E-06 2.7E-10 66.3 9.2 71 178-248 56-166 (220)
403 1uul_A Tryparedoxin peroxidase 98.2 4.9E-06 1.7E-10 66.4 7.7 72 178-249 36-147 (202)
404 3h93_A Thiol:disulfide interch 98.2 7.1E-06 2.4E-10 64.9 8.6 38 72-110 24-61 (192)
405 2f8a_A Glutathione peroxidase 98.2 1.5E-05 5.2E-10 63.9 10.7 41 177-217 46-86 (208)
406 2jsy_A Probable thiol peroxida 98.2 9.2E-06 3.1E-10 62.6 8.9 85 72-156 43-164 (167)
407 3bj5_A Protein disulfide-isome 98.1 2.9E-05 9.9E-10 58.7 11.3 108 46-159 8-127 (147)
408 3ztl_A Thioredoxin peroxidase; 98.1 9.2E-06 3.1E-10 65.9 9.1 73 177-249 68-180 (222)
409 2ht9_A Glutaredoxin-2; thiored 98.1 1.1E-05 3.8E-10 61.0 8.7 67 62-137 38-112 (146)
410 1h75_A Glutaredoxin-like prote 98.1 7.2E-06 2.5E-10 55.0 7.0 54 182-242 3-60 (81)
411 2hze_A Glutaredoxin-1; thiored 98.1 3.3E-06 1.1E-10 61.0 5.5 67 65-137 11-85 (114)
412 2ht9_A Glutaredoxin-2; thiored 98.1 1.1E-05 3.7E-10 61.0 8.2 69 166-243 37-113 (146)
413 2cq9_A GLRX2 protein, glutared 98.1 1.3E-05 4.5E-10 59.3 8.4 68 167-243 16-91 (130)
414 1xvq_A Thiol peroxidase; thior 98.1 5E-06 1.7E-10 64.8 6.2 65 72-137 43-141 (175)
415 2i81_A 2-Cys peroxiredoxin; st 98.1 1.6E-05 5.3E-10 64.1 9.2 72 177-248 51-161 (213)
416 1r7h_A NRDH-redoxin; thioredox 98.1 1.2E-05 4.2E-10 52.9 7.0 54 182-242 3-60 (75)
417 3c1r_A Glutaredoxin-1; oxidize 98.1 7.9E-06 2.7E-10 59.4 6.5 69 63-137 15-92 (118)
418 2hze_A Glutaredoxin-1; thiored 98.1 8E-06 2.7E-10 59.0 6.4 59 181-243 20-86 (114)
419 4g2e_A Peroxiredoxin; redox pr 98.0 4.8E-06 1.7E-10 63.7 5.3 40 72-111 29-69 (157)
420 1v58_A Thiol:disulfide interch 98.0 1.5E-05 5.2E-10 65.5 8.5 70 178-250 97-220 (241)
421 1xzo_A BSSCO, hypothetical pro 98.0 1.5E-05 5.1E-10 61.6 7.9 41 72-112 32-75 (174)
422 1xzo_A BSSCO, hypothetical pro 98.0 2.5E-05 8.4E-10 60.4 8.8 41 177-217 32-75 (174)
423 3ic4_A Glutaredoxin (GRX-1); s 98.0 3.1E-05 1.1E-09 53.3 8.0 68 77-155 14-91 (92)
424 2yan_A Glutaredoxin-3; oxidore 98.0 2.7E-05 9.2E-10 55.2 7.8 66 169-243 8-83 (105)
425 3ixr_A Bacterioferritin comigr 98.0 3.1E-05 1E-09 60.5 8.8 66 72-137 50-153 (179)
426 4gqc_A Thiol peroxidase, perox 98.0 2.4E-06 8.2E-11 66.0 2.3 47 65-111 25-72 (164)
427 3rhb_A ATGRXC5, glutaredoxin-C 98.0 3.3E-05 1.1E-09 55.5 8.2 65 64-137 10-83 (113)
428 3c1r_A Glutaredoxin-1; oxidize 98.0 2.2E-05 7.4E-10 57.1 7.1 69 169-243 16-93 (118)
429 2jsy_A Probable thiol peroxida 98.0 6.1E-05 2.1E-09 57.9 10.0 69 177-247 43-146 (167)
430 2yan_A Glutaredoxin-3; oxidore 97.9 3.6E-05 1.2E-09 54.6 7.9 65 64-137 8-82 (105)
431 1xvq_A Thiol peroxidase; thior 97.9 3.6E-05 1.2E-09 59.8 8.3 67 178-247 44-147 (175)
432 2b7k_A SCO1 protein; metalloch 97.9 3.2E-05 1.1E-09 61.5 8.1 40 178-217 41-84 (200)
433 3rhb_A ATGRXC5, glutaredoxin-C 97.9 4.2E-05 1.4E-09 54.9 7.8 66 169-243 10-84 (113)
434 3h93_A Thiol:disulfide interch 97.9 4.5E-05 1.6E-09 60.1 8.4 40 177-217 24-63 (192)
435 2klx_A Glutaredoxin; thioredox 97.9 5.6E-06 1.9E-10 56.8 2.6 55 76-137 7-65 (89)
436 3ixr_A Bacterioferritin comigr 97.9 0.00011 3.6E-09 57.4 10.3 70 178-247 51-159 (179)
437 1n8j_A AHPC, alkyl hydroperoxi 97.9 4.2E-05 1.4E-09 60.1 7.9 84 72-156 29-153 (186)
438 3gv1_A Disulfide interchange p 97.9 4.3E-05 1.5E-09 57.8 7.6 81 72-160 13-140 (147)
439 2c0d_A Thioredoxin peroxidase 97.9 3.6E-05 1.2E-09 62.4 7.4 84 72-156 55-181 (221)
440 2pwj_A Mitochondrial peroxired 97.9 1.1E-05 3.9E-10 62.6 4.3 62 66-127 37-107 (171)
441 2pn8_A Peroxiredoxin-4; thiore 97.8 6.9E-05 2.4E-09 60.2 8.3 84 72-156 47-174 (211)
442 2wfc_A Peroxiredoxin 5, PRDX5; 97.8 0.00011 3.9E-09 56.6 9.1 40 178-217 31-73 (167)
443 1nm3_A Protein HI0572; hybrid, 97.8 0.00016 5.4E-09 59.2 10.3 72 177-248 32-143 (241)
444 2klx_A Glutaredoxin; thioredox 97.8 8.6E-06 2.9E-10 55.9 2.1 54 182-242 8-65 (89)
445 1fov_A Glutaredoxin 3, GRX3; a 97.8 7.8E-05 2.7E-09 49.9 6.9 67 77-156 3-74 (82)
446 2wfc_A Peroxiredoxin 5, PRDX5; 97.7 3.6E-05 1.2E-09 59.5 5.5 56 72-127 30-95 (167)
447 3a2v_A Probable peroxiredoxin; 97.7 4.5E-05 1.6E-09 62.8 6.4 89 67-156 27-159 (249)
448 3qpm_A Peroxiredoxin; oxidored 97.7 9.3E-05 3.2E-09 60.7 8.3 84 72-156 76-203 (240)
449 3uma_A Hypothetical peroxiredo 97.7 3.4E-05 1.2E-09 60.6 5.4 39 73-111 56-97 (184)
450 3me7_A Putative uncharacterize 97.7 0.00026 9E-09 54.6 10.2 90 73-162 28-165 (170)
451 2c0d_A Thioredoxin peroxidase 97.7 0.00014 4.9E-09 58.8 9.0 72 177-248 55-165 (221)
452 2pn8_A Peroxiredoxin-4; thiore 97.7 0.0002 7E-09 57.4 9.4 71 178-248 48-158 (211)
453 1fov_A Glutaredoxin 3, GRX3; a 97.7 7.6E-05 2.6E-09 49.9 5.9 55 182-243 3-62 (82)
454 3qmx_A Glutaredoxin A, glutare 97.7 0.00015 5.1E-09 50.8 7.5 57 74-137 15-77 (99)
455 3nzn_A Glutaredoxin; structura 97.7 0.00019 6.6E-09 50.5 8.2 71 74-154 21-101 (103)
456 1tp9_A Peroxiredoxin, PRX D (t 97.7 0.00017 5.9E-09 55.2 8.4 41 177-217 34-77 (162)
457 2yzh_A Probable thiol peroxida 97.7 6.3E-05 2.2E-09 58.1 5.8 54 72-127 46-106 (171)
458 1n8j_A AHPC, alkyl hydroperoxi 97.7 0.00028 9.6E-09 55.3 9.6 71 178-248 30-137 (186)
459 2i3y_A Epididymal secretory gl 97.7 0.0002 7E-09 57.6 8.8 40 72-112 55-94 (215)
460 1psq_A Probable thiol peroxida 97.7 6.8E-05 2.3E-09 57.5 5.8 54 72-127 41-101 (163)
461 2khp_A Glutaredoxin; thioredox 97.6 0.00012 4.2E-09 50.2 6.5 55 76-137 7-66 (92)
462 3qmx_A Glutaredoxin A, glutare 97.6 0.00014 5E-09 50.8 6.8 58 179-243 15-78 (99)
463 1tp9_A Peroxiredoxin, PRX D (t 97.6 4.2E-05 1.4E-09 58.7 4.4 37 72-108 34-72 (162)
464 1z6m_A Conserved hypothetical 97.6 0.00027 9.2E-09 54.7 9.0 30 73-102 27-56 (175)
465 3uma_A Hypothetical peroxiredo 97.6 0.00028 9.6E-09 55.3 8.6 66 178-243 56-161 (184)
466 3ctg_A Glutaredoxin-2; reduced 97.6 0.00013 4.5E-09 53.7 6.2 70 62-137 26-104 (129)
467 2khp_A Glutaredoxin; thioredox 97.6 0.00019 6.5E-09 49.2 6.6 55 182-243 8-67 (92)
468 3h8q_A Thioredoxin reductase 3 97.6 0.00025 8.6E-09 50.9 7.5 67 168-243 7-81 (114)
469 3ic4_A Glutaredoxin (GRX-1); s 97.5 0.00012 4.1E-09 50.2 5.3 53 182-241 14-76 (92)
470 3qpm_A Peroxiredoxin; oxidored 97.5 0.00049 1.7E-08 56.3 9.8 66 178-243 77-181 (240)
471 3h8q_A Thioredoxin reductase 3 97.5 0.00037 1.3E-08 50.1 8.0 65 63-136 7-79 (114)
472 3ctg_A Glutaredoxin-2; reduced 97.5 0.00021 7.1E-09 52.7 6.8 70 168-243 27-105 (129)
473 2znm_A Thiol:disulfide interch 97.5 0.00012 4.1E-09 57.8 5.8 31 73-103 22-52 (195)
474 3hd5_A Thiol:disulfide interch 97.5 0.00012 4.2E-09 57.8 5.6 41 72-113 24-64 (195)
475 4g2e_A Peroxiredoxin; redox pr 97.5 7.3E-05 2.5E-09 57.0 4.1 40 178-217 30-70 (157)
476 3mng_A Peroxiredoxin-5, mitoch 97.5 7.7E-05 2.6E-09 58.0 4.2 55 73-127 43-107 (173)
477 2pwj_A Mitochondrial peroxired 97.5 8.2E-05 2.8E-09 57.7 4.3 42 176-217 42-85 (171)
478 3p7x_A Probable thiol peroxida 97.5 0.00015 5.3E-09 55.6 5.9 30 72-101 45-75 (166)
479 4gqc_A Thiol peroxidase, perox 97.5 3.2E-05 1.1E-09 59.6 1.8 73 171-243 26-134 (164)
480 3tjj_A Peroxiredoxin-4; thiore 97.5 0.00019 6.7E-09 59.3 6.7 66 72-137 90-194 (254)
481 1q98_A Thiol peroxidase, TPX; 97.5 0.00059 2E-08 52.2 9.0 68 178-247 43-148 (165)
482 1q98_A Thiol peroxidase, TPX; 97.5 5.4E-05 1.9E-09 58.2 3.0 37 72-110 42-79 (165)
483 3hz8_A Thiol:disulfide interch 97.5 0.00015 5.3E-09 57.3 5.6 40 73-113 24-63 (193)
484 3msz_A Glutaredoxin 1; alpha-b 97.4 0.00014 4.7E-09 49.4 4.5 56 181-243 5-72 (89)
485 2rem_A Disulfide oxidoreductas 97.4 0.0006 2E-08 53.5 8.6 80 72-156 24-181 (193)
486 3msz_A Glutaredoxin 1; alpha-b 97.4 0.00039 1.3E-08 47.1 6.5 68 76-156 5-84 (89)
487 3gv1_A Disulfide interchange p 97.4 0.0005 1.7E-08 51.8 7.6 65 178-251 14-127 (147)
488 3a2v_A Probable peroxiredoxin; 97.4 0.00059 2E-08 56.1 8.3 71 173-243 28-137 (249)
489 2r37_A Glutathione peroxidase 97.3 0.00014 4.8E-09 58.2 4.0 40 72-112 37-76 (207)
490 4dvc_A Thiol:disulfide interch 97.3 0.0014 4.7E-08 50.8 9.6 31 72-102 20-50 (184)
491 1wik_A Thioredoxin-like protei 97.3 0.00049 1.7E-08 48.9 6.3 65 64-137 6-80 (109)
492 3hd5_A Thiol:disulfide interch 97.3 0.00038 1.3E-08 54.9 6.3 39 178-217 25-63 (195)
493 2yzh_A Probable thiol peroxida 97.3 0.00041 1.4E-08 53.4 6.3 38 178-217 47-85 (171)
494 1psq_A Probable thiol peroxida 97.3 0.00036 1.2E-08 53.3 6.0 69 178-248 42-145 (163)
495 1prx_A HORF6; peroxiredoxin, h 97.3 0.0015 5.1E-08 52.8 9.9 36 75-110 34-69 (224)
496 3me7_A Putative uncharacterize 97.3 0.0027 9.3E-08 48.8 10.8 40 178-217 28-70 (170)
497 3zrd_A Thiol peroxidase; oxido 97.3 0.00014 4.8E-09 57.9 3.1 37 72-110 77-114 (200)
498 3nzn_A Glutaredoxin; structura 97.2 0.00047 1.6E-08 48.5 5.4 52 180-236 22-83 (103)
499 3hz8_A Thiol:disulfide interch 97.2 0.00051 1.7E-08 54.2 6.1 39 178-217 24-62 (193)
500 1wik_A Thioredoxin-like protei 97.2 0.00085 2.9E-08 47.7 6.4 65 170-243 7-81 (109)
No 1
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=8.8e-38 Score=275.75 Aligned_cols=253 Identities=17% Similarity=0.309 Sum_probs=210.1
Q ss_pred CccccchHHHHHcCCCCCCeEEEeec--CccccccCCCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhcC-CcEE
Q psy159 1 MVKISDTEAAAKYNIINLPSLVYFRK--QVPLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEEN-EFVT 77 (285)
Q Consensus 1 ~~~~~~~~~~~~~~i~~~Ptl~~~~~--~~~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~~-~~~l 77 (285)
|+.+.++++|++++++. |+|++|++ +.++.|+|.++.+ +|.+|++.+..|. |.++|.+++..++.++ +.++
T Consensus 66 F~~t~~~~v~~~~~v~~-~~i~lfk~f~~~~~~~~g~~~~~-~i~~fi~~~~~p~----v~~~~~~~~~~~~~~~~~~~~ 139 (361)
T 3uem_A 66 FGITSNSDVFSKYQLDK-DGVVLFKKFDEGRNNFEGEVTKE-NLLDFIKHNQLPL----VIEFTEQTAPKIFGGEIKTHI 139 (361)
T ss_dssp EEEECCHHHHHHTTCSS-SEEEEEESSTTSEEECCSCCCHH-HHHHHHHHHSSCS----EEECSTTTHHHHHSCSCCEEE
T ss_pred EEEECcHHHHHHhCCCC-CeEEEEEecCCCccccCCcCCHH-HHHHHHHHcCCCc----ceecCcccHHHHhcCCCCcEE
Confidence 46788999999999988 99999998 4678899987655 9999999999988 9999999999998765 5678
Q ss_pred EEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-----ChhHHhhhCCCC--CCeEEEEcccc-ceeec---CCCch
Q psy159 78 VFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-----DPRYARKWGVTK--LPAVVYFRHRF-PSIYR---GDLSE 146 (285)
Q Consensus 78 v~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-----~~~l~~~~~i~~--~Ptl~~~~~g~-~~~y~---g~~~~ 146 (285)
|+||++||++|+++.|.|+++|+.+++. +.|+.+| ++.+|+.|||.+ +|++.++..|. ...|. |.++.
T Consensus 140 v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~ 218 (361)
T 3uem_A 140 LLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTA 218 (361)
T ss_dssp EEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCH
T ss_pred EEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCH
Confidence 9999999999999999999999999764 7888776 467899999998 99999999844 45665 67777
Q ss_pred hHHHHHHHhhhcc-----------------ccccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcC
Q psy159 147 EEEVLQWLITQKT-----------------EDRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECD 208 (285)
Q Consensus 147 ~~~l~~fi~~~~~-----------------~~~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~ 208 (285)
+ +|.+|+.+.+. ...+..++.++|++.+ .++++++|.||||||++|+.+.|.|+++++.++
T Consensus 219 ~-~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~ 297 (361)
T 3uem_A 219 E-RITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYK 297 (361)
T ss_dssp H-HHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred H-HHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhc
Confidence 5 99999998642 2346778999999986 468999999999999999999999999999998
Q ss_pred cC-CeEEEEE-cChHHHHhcCCcccCeEEEEeCC---eEEEEecCCccchhHHHHHhhhc
Q psy159 209 IY-GIHMVKI-QDPQLAKRYSIKTFPALVYFRNG---NPLIFEGENKILKGTYIGTYIST 263 (285)
Q Consensus 209 ~~-~i~~~~i-~~~~~~~~~~v~~~Ptl~~~~~g---~~~~y~g~~~~e~~~~~~~~~~~ 263 (285)
+. ++.++.+ .....+++|+|.++||+++|++| .+..|.|.++. ..+..|+.++
T Consensus 298 ~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~--~~l~~~l~~~ 355 (361)
T 3uem_A 298 DHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTL--DGFKKFLESG 355 (361)
T ss_dssp TCSSEEEEEEETTTCBCSSCCCCSSSEEEEECSSSSCCCEECCSCSSH--HHHHHHHTTT
T ss_pred cCCcEEEEEEECCccchhhcCCcccCeEEEEECCCCcceeEecCCCCH--HHHHHHHHhc
Confidence 63 4889998 22223789999999999999665 35699998863 3355555443
No 2
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=1e-37 Score=260.02 Aligned_cols=208 Identities=21% Similarity=0.371 Sum_probs=182.3
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCC--CcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNM--DITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~--~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
.+.|..+|.++|+.++.++++++|.|||+||++|+++.|.|+++++.+++. ++.++.+| ++.+|++|+|.++||+
T Consensus 14 ~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTI 93 (241)
T ss_dssp ETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEE
Confidence 456999999999999999999999999999999999999999999998433 37788776 7899999999999999
Q ss_pred EEEccccceeecCCCchhHHHHHHHhhhccc------cccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHH
Q psy159 130 VYFRHRFPSIYRGDLSEEEEVLQWLITQKTE------DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKV 203 (285)
Q Consensus 130 ~~~~~g~~~~y~g~~~~~~~l~~fi~~~~~~------~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~l 203 (285)
++|++|+.+.|.|.++.+ ++.+|+.+...+ ..+..++.++|++.+.++++++|.||++||++|+.+.|.++++
T Consensus 94 ~~~~~g~~~~~~g~~~~~-~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~ 172 (241)
T 3idv_A 94 KILKKGQAVDYEGSRTQE-EIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKA 172 (241)
T ss_dssp EEEETTEEEECCSCSCHH-HHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHH
T ss_pred EEEcCCCcccccCcccHH-HHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHH
Confidence 999999988999999886 899999987643 3567789999999999999999999999999999999999999
Q ss_pred HhhcCcC--CeEEEEE---cChHHHHhcCCcccCeEEEEeCCeEEEEecCCccchhHHHHHhhhcCC
Q psy159 204 DDECDIY--GIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENKILKGTYIGTYISTKA 265 (285)
Q Consensus 204 a~~~~~~--~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~~e~~~~~~~~~~~~~ 265 (285)
++++.+. ++.|+.+ .+++++++|+|.++||+++|++|+.+.|.|.++ .+.++.|+.+...
T Consensus 173 a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~--~~~l~~~l~~~~~ 237 (241)
T 3idv_A 173 AKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYDYNGPRE--KYGIVDYMIEQSG 237 (241)
T ss_dssp HHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEECCSCCS--HHHHHHHHHHHTT
T ss_pred HHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEEEecCCCC--HHHHHHHHHhhhC
Confidence 9998642 3888888 688999999999999999999999999999886 3346777765543
No 3
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=7.4e-37 Score=294.75 Aligned_cols=247 Identities=14% Similarity=0.202 Sum_probs=210.2
Q ss_pred cchHHHHHcCCCCCCeEEEeecCccccccCCCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhc---CCcEEEEEe
Q psy159 5 SDTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEE---NEFVTVFFY 81 (285)
Q Consensus 5 ~~~~~~~~~~i~~~Ptl~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~---~~~~lv~Fy 81 (285)
.+.++|+.|||+++||++++++|....|.|.++.+ +|.+|+.+...|. |..++.++|++++.. +..++|.||
T Consensus 497 ~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~-~l~~fi~~~~~~~----v~~l~~~~f~~~v~~~~~~~~~lv~F~ 571 (780)
T 3apo_A 497 IHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAE-QILEFIEDLRNPS----VVSLTPSTFNELVKQRKHDEVWMVDFY 571 (780)
T ss_dssp TCHHHHHHTTCCSSSEEEEEETTEEEEECSCSCHH-HHHHHHHHHHSCS----EEECCHHHHHHHTTTCCTTCCEEEEEE
T ss_pred CCHHHHHHcCCCcCCeEEEEcCCceeeecCcccHH-HHHHHHHhhcccc----eeecCcccHHHHhhccCCCCeEEEEEE
Confidence 35789999999999999999988777889987766 9999999887766 999999999999865 467899999
Q ss_pred CCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEcccc-----ceeecC-CCchhHHHHH
Q psy159 82 ETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRF-----PSIYRG-DLSEEEEVLQ 152 (285)
Q Consensus 82 a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~-----~~~y~g-~~~~~~~l~~ 152 (285)
+|||+||+++.|.|+++|+.+++ ++.|+.+| +..+|++++|.++|++++|+.|. +..|.| .++.+ +|.+
T Consensus 572 ap~C~~c~~~~p~~~~lA~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~-~l~~ 649 (780)
T 3apo_A 572 SPWSHPSQVLMPEWKRMARTLTG-LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAY-SLRS 649 (780)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHH-HHHH
T ss_pred CCCCHHHHHhhHHHHHHHHHhhC-CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHH-HHHH
Confidence 99999999999999999999976 48899887 67899999999999999998764 467999 77775 9999
Q ss_pred HHhhhccccccccccHHHHHHH-HHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCC
Q psy159 153 WLITQKTEDRIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSI 228 (285)
Q Consensus 153 fi~~~~~~~~v~~~~~~~~~~~-~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v 228 (285)
|+.+...+. +..++.++|++. +..+++++|.||++||++|+.+.|.++++++++++ ++.|+.+ .++.++++|+|
T Consensus 650 fi~~~~~~~-v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~~~~~~~v 727 (780)
T 3apo_A 650 WGLGFLPQA-SIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGI 727 (780)
T ss_dssp HHHTTSCCC-SEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTC
T ss_pred HHhhhcccc-cccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCHHHHHhcCC
Confidence 999988544 557899999775 55688999999999999999999999999999986 7899998 67889999999
Q ss_pred cccCeEEEEeCCeEE-EEec----CCccchhHHHHHhhh
Q psy159 229 KTFPALVYFRNGNPL-IFEG----ENKILKGTYIGTYIS 262 (285)
Q Consensus 229 ~~~Ptl~~~~~g~~~-~y~g----~~~~e~~~~~~~~~~ 262 (285)
.++||++++++|+.+ .+.| .++ ...+..|+.+
T Consensus 728 ~~~Pt~~~~~~g~~~~~~~G~~~g~~~--~~~l~~~l~~ 764 (780)
T 3apo_A 728 KAYPSVKLYQYERAKKSIWEEQINSRD--AKTIAALIYG 764 (780)
T ss_dssp CSSSEEEEEEEETTTTEEEEEEECCCC--HHHHHHHHHH
T ss_pred CcCCEEEEEcCCCccccccCcccCCcC--HHHHHHHHHH
Confidence 999999999988755 5666 343 2334555544
No 4
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=8.7e-37 Score=294.24 Aligned_cols=255 Identities=13% Similarity=0.153 Sum_probs=215.3
Q ss_pred cchHHHHHcCCCCCCeEEEeecCc---cccccCCCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhcCCcEEEEEe
Q psy159 5 SDTEAAAKYNIINLPSLVYFRKQV---PLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEENEFVTVFFY 81 (285)
Q Consensus 5 ~~~~~~~~~~i~~~Ptl~~~~~~~---~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~~~~~lv~Fy 81 (285)
.+.++|++++++. |++++|+++. ...|+|....+ +|.+|+.....|. |.++|.++|+.+ .+++++|.||
T Consensus 392 ~~~~~~~~~~~~~-p~i~l~~~~~~e~~~~~~g~~~~~-~i~~f~~~~~~~~----v~~l~~~~~~~~--~~~~vlv~F~ 463 (780)
T 3apo_A 392 SAPGICSDLYVFQ-PSLAVFKGQGTKEYEIHHGKKILY-DILAFAKESVNSH----VTTLGPQNFPAS--DKEPWLVDFF 463 (780)
T ss_dssp GCHHHHHHTTCCS-CEEEEEESSTTSSEEECCSCCCHH-HHHHHHHHHHTSC----EEECCTTTSCTT--CCSCEEEEEE
T ss_pred CchhhHhhccccC-ChhhhccCCCcceeeecccHhhHH-HHHHHhhhccCCC----CEecCHHHHHHc--CCCeEEEEEE
Confidence 4578999999976 9999999864 56799986555 9999999987776 999999999887 7789999999
Q ss_pred CCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhhhc
Q psy159 82 ETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 82 a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~~ 158 (285)
|+||++|+++.|.|+++|+.+++ ++.++.+| ++.+|++|||.++||++++++|+...|.|.++.+ +|.+|+.+..
T Consensus 464 a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~-~l~~fi~~~~ 541 (780)
T 3apo_A 464 APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAE-QILEFIEDLR 541 (780)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEECSCSCHH-HHHHHHHHHH
T ss_pred CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcCCceeeecCcccHH-HHHHHHHhhc
Confidence 99999999999999999999964 38888876 6789999999999999999888888899999886 9999999998
Q ss_pred cccccccccHHHHHHHHHh---CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccC
Q psy159 159 TEDRIELITRVMLETMVEE---TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFP 232 (285)
Q Consensus 159 ~~~~v~~~~~~~~~~~~~~---~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~P 232 (285)
.++ +..++.++|++++.. +..++|.||+|||++|+++.|.|+++|+.+++ ++.|+.+ .+..+|++++|.++|
T Consensus 542 ~~~-v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~P 619 (780)
T 3apo_A 542 NPS-VVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG-LINVGSVDCGQYHSFCTQENVQRYP 619 (780)
T ss_dssp SCS-EEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTTCCSSS
T ss_pred ccc-eeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-CeEEEEEECcchHHHHHHcCCCCCC
Confidence 754 557889999998765 56789999999999999999999999999997 7999999 577899999999999
Q ss_pred eEEEEeCCe-----EEEEec-CCccchhHHHHHhhhcCCCCCCCCCCC
Q psy159 233 ALVYFRNGN-----PLIFEG-ENKILKGTYIGTYISTKAFSLIPFCFS 274 (285)
Q Consensus 233 tl~~~~~g~-----~~~y~g-~~~~e~~~~~~~~~~~~~~~~~~e~~~ 274 (285)
++++|+.|. +..|+| .++. +.+..|+ .....+.+.+++.
T Consensus 620 ti~~~~~~~~~~~~~~~y~g~~~~~--~~l~~fi-~~~~~~~v~~l~~ 664 (780)
T 3apo_A 620 EIRFYPQKSSKAYQYHSYNGWNRDA--YSLRSWG-LGFLPQASIDLTP 664 (780)
T ss_dssp EEEEECCCSSSCCSCEECCCSCCSH--HHHHHHH-HTTSCCCSEEECH
T ss_pred eEEEEcCCCcCccchhhcCCCCCCH--HHHHHHH-hhhcccccccCCH
Confidence 999998763 568999 6653 3345554 4444455555543
No 5
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=3.7e-33 Score=246.44 Aligned_cols=217 Identities=15% Similarity=0.231 Sum_probs=186.2
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHH------HHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCC
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVL------ERLEKIDGETDNMDITFVKMA---DPRYARKWGVTK 125 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~------~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~ 125 (285)
.+.|.+||.++|++++.++++++|.||||||+||.... |.|+++|+.+++.++.++++| ++++|++|+|++
T Consensus 12 ~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~ 91 (367)
T 3us3_A 12 VDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE 91 (367)
T ss_dssp CCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc
Confidence 44699999999999999999999999999999973332 689999999976569999888 789999999999
Q ss_pred CCeEEEEccccceeecCCCchhHHHHHHHhhhccccccccccHHHHHHHHH-hCCeEEEEEECCCChhhHHHHHHHHHHH
Q psy159 126 LPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVD 204 (285)
Q Consensus 126 ~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~F~a~~c~~c~~~~~~~~~la 204 (285)
+||+++|++|++..|.|.++.+ +|++|+.++..+++....+.+++++++. +++.++|.|+++||+ ...+.|.++|
T Consensus 92 ~PTl~~f~~G~~~~y~G~~~~~-~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A 167 (367)
T 3us3_A 92 EDSIYVFKEDEVIEYDGEFSAD-TLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAA 167 (367)
T ss_dssp TTEEEEEETTEEEECCSCCSHH-HHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHH
T ss_pred CceEEEEECCcEEEeCCCCCHH-HHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHH
Confidence 9999999999999999999986 9999999998877776667889999998 678899999999876 4577899999
Q ss_pred hhcCcCCeEEEEEcChHHHHhcCCcccCeEEEEeC--CeEEEEecC-CccchhHHHHHhhhcCCCCCCCCCCCCCCCCc
Q psy159 205 DECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRN--GNPLIFEGE-NKILKGTYIGTYISTKAFSLIPFCFSEKHPGA 280 (285)
Q Consensus 205 ~~~~~~~i~~~~i~~~~~~~~~~v~~~Ptl~~~~~--g~~~~y~g~-~~~e~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 280 (285)
..+++ ++.|+.+.+..++++|+|+. |+|++|+. +.++.|+|. ++ . +. +..|++....|+++++|.++....
T Consensus 168 ~~~~~-~~~F~~~~~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~-~-~~-l~~fi~~~~~p~v~elt~~~~~~~ 241 (367)
T 3us3_A 168 EEFHP-YIPFFATFDSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNS-E-EE-IVNFVEEHRRSTLRKLKPESMYET 241 (367)
T ss_dssp HHHTT-TSCEEEECCHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCC-H-HH-HHHHHHHTCSCSEEECCGGGHHHH
T ss_pred HhhcC-CcEEEEECCHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCC-H-HH-HHHHHHHcCccceeecChhhHHHH
Confidence 99986 79999998889999999985 99999987 567899996 53 3 33 556677789999999998876444
No 6
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=2.9e-32 Score=239.50 Aligned_cols=216 Identities=12% Similarity=0.253 Sum_probs=185.7
Q ss_pred cceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHH-------HHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCC
Q psy159 56 NEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLER-------LEKIDGETDNMDITFVKMA---DPRYARKWGVTK 125 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~-------~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~ 125 (285)
+.|.++|+++|++.+.++++++|.||||||+ |+.+.|. |+++|+.+++.++.++.+| ++++|++|+|.+
T Consensus 11 ~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~ 89 (350)
T 1sji_A 11 DRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDE 89 (350)
T ss_dssp CCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCS
T ss_pred CccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCc
Confidence 4588999999999998889999999999999 9888888 9999999965568888887 789999999999
Q ss_pred CCeEEEEccccceeecCCCchhHHHHHHHhhhccccccccccHHHHHHHHH-hCCeEEEEEECCCChhhHHHHHHHHHHH
Q psy159 126 LPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVD 204 (285)
Q Consensus 126 ~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~F~a~~c~~c~~~~~~~~~la 204 (285)
+||+++|++|+...|.|.++.+ +|++|+.+...+++....+.+++++++. +++.++|.|+++||.. ..+.|.++|
T Consensus 90 ~Pt~~~~~~g~~~~~~G~~~~~-~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~---~~~~~~~~A 165 (350)
T 1sji_A 90 EGSLYVLKGDRTIEFDGEFAAD-VLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESE---YYKAFEEAA 165 (350)
T ss_dssp TTEEEEEETTEEEEECSCCCHH-HHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSH---HHHHHHHHH
T ss_pred cceEEEEECCcEEEecCCCCHH-HHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcH---HHHHHHHHH
Confidence 9999999999988999999886 9999999999877766557889999988 7778899999998754 468899999
Q ss_pred hhcCcCCeEEEEEcChHHHHhcCCcccCeEEEEeC--CeEEEEecC-CccchhHHHHHhhhcCCCCCCCCCCCCCCCCcc
Q psy159 205 DECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRN--GNPLIFEGE-NKILKGTYIGTYISTKAFSLIPFCFSEKHPGAF 281 (285)
Q Consensus 205 ~~~~~~~i~~~~i~~~~~~~~~~v~~~Ptl~~~~~--g~~~~y~g~-~~~e~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 281 (285)
..+++ ++.|+.+.++.++++++++ +|++++|+. +.++.|+|. ++ .+. +..|++....|+++++|.++.+..+
T Consensus 166 ~~~~~-~~~f~~~~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~--~~~-l~~fi~~~~~p~v~elt~~~~~~~~ 240 (350)
T 1sji_A 166 EHFQP-YIKFFATFDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYT--EEE-LVEFVKEHQRPTLRRLRPEDMFETW 240 (350)
T ss_dssp HHTTT-TSEEEEECCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCC--HHH-HHHHHHHHCCCSEEECCTTTHHHHH
T ss_pred Hhhcc-CcEEEEECCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCC--HHH-HHHHHHHcCccchhhcChhhHHHHh
Confidence 99986 7999999889999999999 999999986 457799997 53 233 5556667889999999998865443
No 7
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.97 E-value=1.4e-30 Score=214.81 Aligned_cols=194 Identities=14% Similarity=0.209 Sum_probs=156.5
Q ss_pred ChhHHHHHH-h--cCCcEEEEEeCC-CChhHHHHHHHHHhHHhhcCCCCcEEEEeC-----ChhHHhhhCCCCCCeEEEE
Q psy159 62 NRRMLDKLL-E--ENEFVTVFFYET-DHKDSVKVLERLEKIDGETDNMDITFVKMA-----DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 62 ~~~~f~~~~-~--~~~~~lv~Fya~-~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-----~~~l~~~~~i~~~Ptl~~~ 132 (285)
+.+.+..++ . .+..++|.||++ ||++|+++.|.|+++|+..+ ++.++.+| ++++|++|||.++||+++|
T Consensus 8 ~~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~--~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (226)
T 1a8l_A 8 DKKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTD--KLSYEIVDFDTPEGKELAKRYRIDRAPATTIT 85 (226)
T ss_dssp HHHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCT--TEEEEEEETTSHHHHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhhCC--ceEEEEEeCCCcccHHHHHHcCCCcCceEEEE
Confidence 445666666 3 235567999999 99999999999999986533 47777766 5689999999999999999
Q ss_pred ccccc--eeecCCCchhHHHHHHHhhhcc-ccccccccHHHHHHHHHhCCeE-EEEEECCCChhhHHHHHHHHHHHhhcC
Q psy159 133 RHRFP--SIYRGDLSEEEEVLQWLITQKT-EDRIELITRVMLETMVEETQYL-AVYFYKLNCNICDQILEGLEKVDDECD 208 (285)
Q Consensus 133 ~~g~~--~~y~g~~~~~~~l~~fi~~~~~-~~~v~~~~~~~~~~~~~~~~~~-~v~F~a~~c~~c~~~~~~~~~la~~~~ 208 (285)
++|+. ..|.|.+... ++.+|+..... ......++.++++.+...++++ +|.||++||++|+.+.|.+++++.++.
T Consensus 86 ~~g~~~~~~~~G~~~~~-~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 86 QDGKDFGVRYFGLPAGH-EFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp ETTBCCSEEEESCCCTT-HHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred cCCceeeEEEeccCcHH-HHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 88864 6799988776 89999887654 2344567888888876666666 999999999999999999999999986
Q ss_pred c---CCeEEEEE---cChHHHHhcCCcccCeEEEEeCCeEE-EEecCCccchhHHHHHh
Q psy159 209 I---YGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPL-IFEGENKILKGTYIGTY 260 (285)
Q Consensus 209 ~---~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~~~-~y~g~~~~e~~~~~~~~ 260 (285)
+ .++.++.+ .++.++++|+|.++||++++++|+.+ .|.|.++.+ .+..++
T Consensus 165 ~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~--~l~~~l 221 (226)
T 1a8l_A 165 KAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEK--MFLEKL 221 (226)
T ss_dssp HTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHH--HHHHHH
T ss_pred cccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHH--HHHHHH
Confidence 1 16888888 67889999999999999999999865 788987633 244444
No 8
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.97 E-value=1.6e-30 Score=238.95 Aligned_cols=100 Identities=12% Similarity=0.271 Sum_probs=88.8
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
.+.|..+|+++|++++.++++++|.||||||+||+++.|.|+++|+.+++.++.++.+| ++.+|++|+|.++||+++
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 92 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKI 92 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEE
Confidence 45699999999999999899999999999999999999999999999966568888887 789999999999999999
Q ss_pred Ecccc---ceeecCCCchhHHHHHHHh
Q psy159 132 FRHRF---PSIYRGDLSEEEEVLQWLI 155 (285)
Q Consensus 132 ~~~g~---~~~y~g~~~~~~~l~~fi~ 155 (285)
|++|+ ...|.|.++.+ .|++|+.
T Consensus 93 ~~~g~~~~~~~~~G~~~~~-~l~~~l~ 118 (504)
T 2b5e_A 93 FKNSDVNNSIDYEGPRTAE-AIVQFMI 118 (504)
T ss_dssp EETTCTTCEEECCSCCSHH-HHHHHHH
T ss_pred EeCCccccceeecCCCCHH-HHHHHHH
Confidence 99987 56788887764 6777664
No 9
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.97 E-value=6.6e-30 Score=211.35 Aligned_cols=191 Identities=18% Similarity=0.207 Sum_probs=155.4
Q ss_pred hhHHHHHH--hcCCcEEEEEe-----CCCChhHHHHHHHHHhHHhhc-CCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 63 RRMLDKLL--EENEFVTVFFY-----ETDHKDSVKVLERLEKIDGET-DNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 63 ~~~f~~~~--~~~~~~lv~Fy-----a~~c~~C~~~~~~~~~~a~~~-~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
.+.+..++ ....+++|.|| +|||++|+.+.|.|.++|+.+ +..++.++.+| ++++|++|+|+++||+++
T Consensus 8 ~~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 87 (229)
T 2ywm_A 8 RMQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVI 87 (229)
T ss_dssp HHHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEE
T ss_pred HHHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEE
Confidence 35566666 34566666666 899999999999999998887 32348888887 899999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhhcc-ccccccccHHHHHHHHHhCCeE-EEEEECCCChhhHHHHHHHHHHHhhcC
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQKT-EDRIELITRVMLETMVEETQYL-AVYFYKLNCNICDQILEGLEKVDDECD 208 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~~~-~~~v~~~~~~~~~~~~~~~~~~-~v~F~a~~c~~c~~~~~~~~~la~~~~ 208 (285)
|++|.. ..|.|.+... ++.+|+..... .+....++.++++.++..++++ ++.||++||++|+.+.|.+++++.++.
T Consensus 88 ~~~~~~~~~~~G~~~~~-~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~ 166 (229)
T 2ywm_A 88 EGDKDYGIRYIGLPAGL-EFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND 166 (229)
T ss_dssp ESSSCCCEEEESCCCTT-HHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT
T ss_pred ECCCcccceecCCccHH-HHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC
Confidence 987544 7899998886 89999988764 3445678899998887666665 788999999999999999999999984
Q ss_pred cCCeEEEEE---cChHHHHhcCCcccCeEEEEeCCeEEEEecCCccchhHHHHHh
Q psy159 209 IYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENKILKGTYIGTY 260 (285)
Q Consensus 209 ~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~~e~~~~~~~~ 260 (285)
++.++.+ .+++++++|+|.++||+++ +|+...|.|.++.+ .+..++
T Consensus 167 --~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~~~~~~G~~~~~--~l~~~l 215 (229)
T 2ywm_A 167 --YITSKVIDASENQDLAEQFQVVGVPKIVI--NKGVAEFVGAQPEN--AFLGYI 215 (229)
T ss_dssp --TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGGTEEEESCCCHH--HHHHHH
T ss_pred --CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCEEEEeeCCCCHH--HHHHHH
Confidence 6888888 6788999999999999998 88865799987633 244444
No 10
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.97 E-value=1.4e-29 Score=231.33 Aligned_cols=215 Identities=13% Similarity=0.246 Sum_probs=184.7
Q ss_pred ceeecChhHHHHHHhcC---CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEE
Q psy159 57 EIEEVNRRMLDKLLEEN---EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 57 ~v~~l~~~~f~~~~~~~---~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
.|.+||+++|++.+.++ ++++|.||||||++|+++.|.|+++|+.+++. +.++.+| ++.+|++|+|.++||++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Ptl~ 80 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTNTCNKYGVSGYPTLK 80 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHHHHHHTTCCEESEEE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 47889999999999777 89999999999999999999999999999664 7788777 78999999999999999
Q ss_pred EEcccc-ceeecCCCchhHHHHHHHhhhccccccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc
Q psy159 131 YFRHRF-PSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDI 209 (285)
Q Consensus 131 ~~~~g~-~~~y~g~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~ 209 (285)
+|++|+ ...|.|.++.+ .|++|+.+...+.+....+.+++++++.+++.++|.|+.++|..+ ...|.++|..+++
T Consensus 81 ~~~~g~~~~~~~G~~~~~-~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~ 156 (481)
T 3f8u_A 81 IFRDGEEAGAYDGPRTAD-GIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEA---HSEFLKAASNLRD 156 (481)
T ss_dssp EEETTEEEEECCSCSSHH-HHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHH---HHHHHHHHHHHTT
T ss_pred EEeCCceeeeecCccCHH-HHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccch---HHHHHHHHHHhcc
Confidence 999996 47899999886 999999999988888777889999999988899999998887654 6778999999986
Q ss_pred CCeEEEEEcChHHHHhcCCcccCeEEEEe--------CCeEEEEe-cCCccchhHHHHHhhhcCCCCCCCCCCCCCCCCc
Q psy159 210 YGIHMVKIQDPQLAKRYSIKTFPALVYFR--------NGNPLIFE-GENKILKGTYIGTYISTKAFSLIPFCFSEKHPGA 280 (285)
Q Consensus 210 ~~i~~~~i~~~~~~~~~~v~~~Ptl~~~~--------~g~~~~y~-g~~~~e~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 280 (285)
++.|+.+.+..++++++++..| +++|+ ++..+.|+ |..+ . +. +..|++....++++++|.++...+
T Consensus 157 -~~~F~~~~~~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~-~-~~-l~~fi~~~~~p~v~e~t~~n~~~~ 231 (481)
T 3f8u_A 157 -NYRFAHTNVESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMT-S-GK-IKKFIQENIFGICPHMTEDNKDLI 231 (481)
T ss_dssp -TSCEEEECCHHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCC-H-HH-HHHHHHHHTTTTSCEECTTTHHHH
T ss_pred -CceEEEECCHHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCC-H-HH-HHHHHHHhCCCCccccChhHHHHh
Confidence 7999999889999999998766 78887 45678999 5553 3 33 667777889999999998876544
Q ss_pred c
Q psy159 281 F 281 (285)
Q Consensus 281 ~ 281 (285)
+
T Consensus 232 ~ 232 (481)
T 3f8u_A 232 Q 232 (481)
T ss_dssp T
T ss_pred c
Confidence 3
No 11
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.96 E-value=2e-28 Score=223.72 Aligned_cols=250 Identities=14% Similarity=0.318 Sum_probs=201.1
Q ss_pred cchHHHHHcCCCCCCeEEEeecC-ccccccCCCcchHHHHHHhhcCCCcccccceeec-ChhHHHHHHhcCCcEEEEEeC
Q psy159 5 SDTEAAAKYNIINLPSLVYFRKQ-VPLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEV-NRRMLDKLLEENEFVTVFFYE 82 (285)
Q Consensus 5 ~~~~~~~~~~i~~~Ptl~~~~~~-~~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l-~~~~f~~~~~~~~~~lv~Fya 82 (285)
.++++|++|+|+++||+++|++| ....|.|.+..+ .|.+|+.+...|. +..+ +.++++.++..++.++|.|+.
T Consensus 63 ~~~~l~~~~~v~~~Ptl~~~~~g~~~~~~~G~~~~~-~l~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~vv~~~~ 137 (481)
T 3f8u_A 63 ANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTAD-GIVSHLKKQAGPA----SVPLRTEEEFKKFISDKDASIVGFFD 137 (481)
T ss_dssp TCHHHHHHTTCCEESEEEEEETTEEEEECCSCSSHH-HHHHHHHHHTSCS----EEEECSHHHHHHHTTSSSCEEEEEES
T ss_pred CCHHHHHhcCCCCCCEEEEEeCCceeeeecCccCHH-HHHHHHHhhcccC----ceecCCHHHHHHHHhcCCcEEEEEEC
Confidence 36799999999999999999999 466799987766 9999999988776 7777 678899999888899999999
Q ss_pred CCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEc--------cccceeec-CCCchhHHHHHH
Q psy159 83 TDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFR--------HRFPSIYR-GDLSEEEEVLQW 153 (285)
Q Consensus 83 ~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~--------~g~~~~y~-g~~~~~~~l~~f 153 (285)
++|.. ....|.++|..+++ ++.|+.+.+.++++++++...| +++|+ ++....|. |..+.+ +|.+|
T Consensus 138 ~~~~~---~~~~f~~~a~~~~~-~~~F~~~~~~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~-~l~~f 211 (481)
T 3f8u_A 138 DSFSE---AHSEFLKAASNLRD-NYRFAHTNVESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSG-KIKKF 211 (481)
T ss_dssp CTTCH---HHHHHHHHHHHHTT-TSCEEEECCHHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHH-HHHHH
T ss_pred CCccc---hHHHHHHHHHHhcc-CceEEEECCHHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHH-HHHHH
Confidence 88775 46789999999855 3889999999999999999877 67776 23446777 555543 77777
Q ss_pred Hhhhc---------------------------------------------------------------------------
Q psy159 154 LITQK--------------------------------------------------------------------------- 158 (285)
Q Consensus 154 i~~~~--------------------------------------------------------------------------- 158 (285)
|..+.
T Consensus 212 i~~~~~p~v~e~t~~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~g 291 (481)
T 3f8u_A 212 IQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFG 291 (481)
T ss_dssp HHHHTTTTSCEECTTTHHHHTTSSEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGT
T ss_pred HHHhCCCCccccChhHHHHhcCCCceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcC
Confidence 76521
Q ss_pred ----------------------------------------------------------cccccccccHHHHHHHHHh-CC
Q psy159 159 ----------------------------------------------------------TEDRIELITRVMLETMVEE-TQ 179 (285)
Q Consensus 159 ----------------------------------------------------------~~~~v~~~~~~~~~~~~~~-~~ 179 (285)
....+..++.++|++.+.+ ++
T Consensus 292 l~~~~~~~P~~~i~~~~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k 371 (481)
T 3f8u_A 292 LESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENK 371 (481)
T ss_dssp CCCCTTCSCEEEEECSSSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTC
T ss_pred CCcccCCCcEEEEEcCCCcccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCC
Confidence 0134567788888887765 88
Q ss_pred eEEEEEECCCChhhHHHHHHHHHHHhhcCcC-CeEEEEE--cChHHHHhcCCcccCeEEEEeCCe---EEEEecCCccch
Q psy159 180 YLAVYFYKLNCNICDQILEGLEKVDDECDIY-GIHMVKI--QDPQLAKRYSIKTFPALVYFRNGN---PLIFEGENKILK 253 (285)
Q Consensus 180 ~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~-~i~~~~i--~~~~~~~~~~v~~~Ptl~~~~~g~---~~~y~g~~~~e~ 253 (285)
+++|.|||+||++|+.+.|.++++++.+++. ++.++.+ +..+++++|+|.++||+++|++|. +..|.|.++.
T Consensus 372 ~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~-- 449 (481)
T 3f8u_A 372 DVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGREL-- 449 (481)
T ss_dssp EEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSCCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSH--
T ss_pred cEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchhhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCH--
Confidence 9999999999999999999999999999863 5889988 344788999999999999998775 5799999863
Q ss_pred hHHHHHhhhcCCCC
Q psy159 254 GTYIGTYISTKAFS 267 (285)
Q Consensus 254 ~~~~~~~~~~~~~~ 267 (285)
..++.|+.++...+
T Consensus 450 ~~l~~~l~~~~~~~ 463 (481)
T 3f8u_A 450 SDFISYLQREATNP 463 (481)
T ss_dssp HHHHHHHHHHCSSC
T ss_pred HHHHHHHHHhcCCc
Confidence 33577776654433
No 12
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.96 E-value=8.2e-30 Score=226.37 Aligned_cols=215 Identities=15% Similarity=0.227 Sum_probs=157.3
Q ss_pred cceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcC-----CCCcEEEEeC---ChhHHhhhCCCCCC
Q psy159 56 NEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETD-----NMDITFVKMA---DPRYARKWGVTKLP 127 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~-----~~~v~~~~~~---~~~l~~~~~i~~~P 127 (285)
+.|..||.++|+..+.++++++|.||||||++|+++.|.|+++|+.++ ..++.++.+| ++.+|++|+|.++|
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 458899999999999889999999999999999999999999999984 2238888887 78999999999999
Q ss_pred eEEEEccccce--eecCCCchhHHHHHHHhhhccccccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHh
Q psy159 128 AVVYFRHRFPS--IYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDD 205 (285)
Q Consensus 128 tl~~~~~g~~~--~y~g~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~ 205 (285)
|+++|++|+.. .|.|.++.+ +|++|+.+...+++....+.++++. +.+++.++|.|+++++..+ .+.|.++|.
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~-~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~---~~~f~~~A~ 159 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVK-ALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDN---YRVFERVAN 159 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHH-HHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHH---HHHHHHHHH
T ss_pred EEEEEeCCcEeeeeecCcchHH-HHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChh---HHHHHHHHH
Confidence 99999999874 599999886 9999999999877665555667877 6677788899999887643 567899999
Q ss_pred hcCcCCeEEEEEcChHHHHhcCCcccCeEEEEeC---CeEEEEecCCccchhHHHHHhhhcCCCCCCCCCCCCCCCCc
Q psy159 206 ECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRN---GNPLIFEGENKILKGTYIGTYISTKAFSLIPFCFSEKHPGA 280 (285)
Q Consensus 206 ~~~~~~i~~~~i~~~~~~~~~~v~~~Ptl~~~~~---g~~~~y~g~~~~e~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 280 (285)
.+++ ++.|+.+.. ++++.++++++| +++.+. +....|+|.+.+.+ . +..|++....++++++|.++....
T Consensus 160 ~~~~-~~~F~~~~~-~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~-~-l~~fi~~~~~p~v~elt~~~~~~~ 232 (382)
T 2r2j_A 160 ILHD-DCAFLSAFG-DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFD-V-TYNWIQDKCVPLVREITFENGEEL 232 (382)
T ss_dssp HHTT-TCEEEEEES-CC--------CE-EEEECSSSSSCCEECCSCTTCHH-H-HHHHHHHHHSCSSEECCHHHHHHH
T ss_pred Hhhc-cceEEEEeh-hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHH-H-HHHHHHhcccCceEecChhhHHHH
Confidence 9986 688877744 578889999999 666554 24679999884333 3 556666677899999988765443
No 13
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.5e-28 Score=206.80 Aligned_cols=217 Identities=14% Similarity=0.159 Sum_probs=169.5
Q ss_pred cccccceeecChhHHHHHHh-cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC-CCcEEEEeC---ChhHHhhhCCCCC
Q psy159 52 FEIKNEIEEVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFVKMA---DPRYARKWGVTKL 126 (285)
Q Consensus 52 p~~~~~v~~l~~~~f~~~~~-~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~-~~v~~~~~~---~~~l~~~~~i~~~ 126 (285)
+.....|.+||.++|++.+. .+++++|.|||+||++|+.+.|.|+++++.+++ ..+..+.+| ++.+|++|+|.++
T Consensus 13 ~~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 13 YDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp CSSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc
Confidence 34466799999999999984 578899999999999999999999999999954 334444454 6899999999999
Q ss_pred CeEEEEcccc------------------ceeecCCCchhHHHHHHHhhhccccccccccHHHHHHHHHh-CCeEEEEEEC
Q psy159 127 PAVVYFRHRF------------------PSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEE-TQYLAVYFYK 187 (285)
Q Consensus 127 Ptl~~~~~g~------------------~~~y~g~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~F~a 187 (285)
||+++|++|+ ...|.|.++.+ .|++|+.+...+.+....+.+++++++.+ +.+.++.| +
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~-~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~f-s 170 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLA-PIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLF-S 170 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHH-HHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEE-E
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHH-HHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEE-c
Confidence 9999999986 47899999986 99999999998877776678889999887 46666666 3
Q ss_pred CCChhhHHHHHHHHHHHhhcCcCCeEEEEEcChHHHHhc-----C-----C-------------cccCeEEEEeC--CeE
Q psy159 188 LNCNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRY-----S-----I-------------KTFPALVYFRN--GNP 242 (285)
Q Consensus 188 ~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~-----~-----v-------------~~~Ptl~~~~~--g~~ 242 (285)
... ...+.|.++|..+.+ ++.|+.+.+.+++..+ + | ..+|+|++|+. +++
T Consensus 171 ~~~----~~~~~f~~~A~~~~~-~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~ 245 (298)
T 3ed3_A 171 KQD----KISPVYKSIALDWLG-KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKF 245 (298)
T ss_dssp SSS----SCCHHHHHHHHHTBT-TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEE
T ss_pred CCC----cchHHHHHHHHHhhc-CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCce
Confidence 322 235789999999987 7999999555444333 2 2 67999999984 788
Q ss_pred EEEecCCccchhHHHHHhhh-cCCCCCCCCCCCCC
Q psy159 243 LIFEGENKILKGTYIGTYIS-TKAFSLIPFCFSEK 276 (285)
Q Consensus 243 ~~y~g~~~~e~~~~~~~~~~-~~~~~~~~e~~~~~ 276 (285)
+.|.|...++ +.+..|+.+ ....|.++++|.++
T Consensus 246 ~~y~g~~~~~-~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 246 WEYEGNSINK-NDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp EECCCSSCCH-HHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred EEeccccCCH-HHHHHHHHhhcCCCCCcCCCchHH
Confidence 8999754333 345666553 66788998887653
No 14
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.95 E-value=3.1e-26 Score=190.87 Aligned_cols=192 Identities=16% Similarity=0.188 Sum_probs=148.3
Q ss_pred hhHHHHHHhc-CCcEEEEEeCCC--ChhHHHHHHHHHhHHhhcCCC--C--cEEEEeC---ChhHHhhhCCCCCCeEEEE
Q psy159 63 RRMLDKLLEE-NEFVTVFFYETD--HKDSVKVLERLEKIDGETDNM--D--ITFVKMA---DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 63 ~~~f~~~~~~-~~~~lv~Fya~~--c~~C~~~~~~~~~~a~~~~~~--~--v~~~~~~---~~~l~~~~~i~~~Ptl~~~ 132 (285)
.+.|..++.. ..+++|.||++| |++|+.+.+.++++|+..... . +.|+.+| ++++|++|||.++||+++|
T Consensus 14 ~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~ 93 (243)
T 2hls_A 14 RRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL 93 (243)
T ss_dssp HHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE
Confidence 3556666643 478999999999 999999999999999885321 1 6777765 7889999999999999999
Q ss_pred ccccceeecCCCchhHHHHHHHhhhccc-cccccccHHHHHHHHHh-CCeEEEEEECCCChhhHHHHHHHHHHHhhcC--
Q psy159 133 RHRFPSIYRGDLSEEEEVLQWLITQKTE-DRIELITRVMLETMVEE-TQYLAVYFYKLNCNICDQILEGLEKVDDECD-- 208 (285)
Q Consensus 133 ~~g~~~~y~g~~~~~~~l~~fi~~~~~~-~~v~~~~~~~~~~~~~~-~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~-- 208 (285)
+| ...|.|.+... ++.+|+...... .....++.+.++.+.+. ++.+++.||++||++|+.+.|.|++++..+.
T Consensus 94 -~g-~~~~~G~~~~~-~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~ 170 (243)
T 2hls_A 94 -GG-EVRWTGIPAGE-EIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ 170 (243)
T ss_dssp -TT-TEEEESCCCTT-HHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT
T ss_pred -CC-ceeEcCCCcHH-HHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc
Confidence 67 88899987765 788888776531 22224566666555433 5667889999999999999999999999982
Q ss_pred c-CCeEEEEE---cChHHHHhcCCcccCeEEEEeCCeEEEEecCCccchhHHHHHhhh
Q psy159 209 I-YGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 209 ~-~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~~e~~~~~~~~~~ 262 (285)
+ .++.+..+ .++.++++|+|.++||+++ +|+. .|.|.++.+ .+..++.+
T Consensus 171 ~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~-~~~G~~~~~--~l~~~l~~ 223 (243)
T 2hls_A 171 GNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYL-VFVGVPYEE--DFLDYVKS 223 (243)
T ss_dssp TCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEE-EEESCCCHH--HHHHHHHH
T ss_pred cCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEE-EEeCCCCHH--HHHHHHHH
Confidence 1 25888888 6788999999999999988 8875 499988633 34555544
No 15
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.94 E-value=3.9e-25 Score=194.02 Aligned_cols=223 Identities=16% Similarity=0.209 Sum_probs=188.0
Q ss_pred cchHHHHHcCCCCCCeEEEeecCccccccCCCcchHHHHHHhhcCCCcccccceeec-ChhHHHHHHh-cCCcEEEEEeC
Q psy159 5 SDTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEV-NRRMLDKLLE-ENEFVTVFFYE 82 (285)
Q Consensus 5 ~~~~~~~~~~i~~~Ptl~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l-~~~~f~~~~~-~~~~~lv~Fya 82 (285)
.++++|++|+|++|||+++|++|.+..|.|.+..+ .|.+|+.+...|. +..+ +.++++.++. +++.++|.|++
T Consensus 77 ~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~G~~~~~-~l~~~i~~~~~~~----~~~l~~~~~~~~~~~~~~~~~vv~ff~ 151 (350)
T 1sji_A 77 KEAKLAKKLGFDEEGSLYVLKGDRTIEFDGEFAAD-VLVEFLLDLIEDP----VEIINSKLEVQAFERIEDQIKLIGFFK 151 (350)
T ss_dssp TTHHHHHHHTCCSTTEEEEEETTEEEEECSCCCHH-HHHHHHHTTSSCS----EEECCSHHHHHHHHHCCSSCEEEEECS
T ss_pred CCHHHHHhcCCCccceEEEEECCcEEEecCCCCHH-HHHHHHHHhcCCc----ceeccchHHHHHHhccCCCcEEEEEEC
Confidence 45799999999999999999999877899997766 9999999988877 8888 5789999988 77889999999
Q ss_pred CCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEcc--ccceeecCC-CchhHHHHHHHhhhcc
Q psy159 83 TDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRH--RFPSIYRGD-LSEEEEVLQWLITQKT 159 (285)
Q Consensus 83 ~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~~--g~~~~y~g~-~~~~~~l~~fi~~~~~ 159 (285)
+||.. ..+.|.++|..+++ ++.|+.+.++++|+++++. +|++.+|++ +.+..|.|. ++.+ +|.+|+.++..
T Consensus 152 ~~~~~---~~~~~~~~A~~~~~-~~~f~~~~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~-~l~~fi~~~~~ 225 (350)
T 1sji_A 152 SEESE---YYKAFEEAAEHFQP-YIKFFATFDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEE-ELVEFVKEHQR 225 (350)
T ss_dssp CTTSH---HHHHHHHHHHHTTT-TSEEEEECCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHH-HHHHHHHHHCC
T ss_pred CCCcH---HHHHHHHHHHhhcc-CcEEEEECCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHH-HHHHHHHHcCc
Confidence 98755 56899999999854 3899999999999999999 999999987 345789997 6664 99999998775
Q ss_pred ccccccccHHHHHHHHHhC--CeEEEEEECCCChhhHHHHHHHHHHHhhcCc-CCeEEEEE---cChHHH----HhcCCc
Q psy159 160 EDRIELITRVMLETMVEET--QYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI---QDPQLA----KRYSIK 229 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~--~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i---~~~~~~----~~~~v~ 229 (285)
+ .+..++.+++.++..+. +..++.|+.+||++|..+.+.++++|+++++ .++.|+.+ ..+.++ +.||+.
T Consensus 226 p-~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~ 304 (350)
T 1sji_A 226 P-TLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKID 304 (350)
T ss_dssp C-SEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSC
T ss_pred c-chhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCC
Confidence 4 45588888888877652 4456668999999999999999999999984 35889999 456666 789998
Q ss_pred -ccCeEEEEeC
Q psy159 230 -TFPALVYFRN 239 (285)
Q Consensus 230 -~~Ptl~~~~~ 239 (285)
++|+++++..
T Consensus 305 ~~~P~~~i~~~ 315 (350)
T 1sji_A 305 LFKPQIGVVNV 315 (350)
T ss_dssp TTSCEEEEEES
T ss_pred ccCCcEEEEec
Confidence 5899999974
No 16
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.94 E-value=7.8e-25 Score=193.17 Aligned_cols=223 Identities=17% Similarity=0.248 Sum_probs=186.7
Q ss_pred cchHHHHHcCCCCCCeEEEeecCccccccCCCcchHHHHHHhhcCCCcccccceeec-ChhHHHHHHh-cCCcEEEEEeC
Q psy159 5 SDTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEV-NRRMLDKLLE-ENEFVTVFFYE 82 (285)
Q Consensus 5 ~~~~~~~~~~i~~~Ptl~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l-~~~~f~~~~~-~~~~~lv~Fya 82 (285)
.++++|++|+|++|||+++|++|.++.|.|.+..+ .|++|+.+...|. +..+ +.+++++++. +.+.++|.||+
T Consensus 79 ~~~~l~~~~~V~~~PTl~~f~~G~~~~y~G~~~~~-~i~~~i~~~~~~~----v~~i~~~~~~~~~~~~~~~~~vv~ff~ 153 (367)
T 3us3_A 79 KDAAVAKKLGLTEEDSIYVFKEDEVIEYDGEFSAD-TLVEFLLDVLEDP----VELIEGERELQAFENIEDEIKLIGYFK 153 (367)
T ss_dssp TTHHHHHHHTCCSTTEEEEEETTEEEECCSCCSHH-HHHHHHHHHHSCS----EEECCSHHHHHHHHHCCSSCEEEEECS
T ss_pred ccHHHHHHcCCCcCceEEEEECCcEEEeCCCCCHH-HHHHHHHHhcCCC----cEEcCCHHHHHHHhccCCCcEEEEEEC
Confidence 46799999999999999999999888999998766 9999999987766 7788 5689999988 67889999999
Q ss_pred CCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEcc--ccceeecCC-CchhHHHHHHHhhhcc
Q psy159 83 TDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRH--RFPSIYRGD-LSEEEEVLQWLITQKT 159 (285)
Q Consensus 83 ~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~~--g~~~~y~g~-~~~~~~l~~fi~~~~~ 159 (285)
+||+. ..+.|.++|..+++ ++.|+.+.+..+++++++.. |+|++|++ +.+..|.|. ++.+ +|.+|+..+..
T Consensus 154 ~~~~~---~~~~f~~~A~~~~~-~~~F~~~~~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~-~l~~fi~~~~~ 227 (367)
T 3us3_A 154 NKDSE---HYKAFKEAAEEFHP-YIPFFATFDSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEE-EIVNFVEEHRR 227 (367)
T ss_dssp CTTCH---HHHHHHHHHHHHTT-TSCEEEECCHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHH-HHHHHHHHTCS
T ss_pred CCCch---HHHHHHHHHHhhcC-CcEEEEECCHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHH-HHHHHHHHcCc
Confidence 98764 67889999999965 38899999999999999995 99999997 456889996 6664 99999999876
Q ss_pred ccccccccHHHHHHHHHh--CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcC-CeEEEEE---cChHH----HHhcCCc
Q psy159 160 EDRIELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIY-GIHMVKI---QDPQL----AKRYSIK 229 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~--~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~-~i~~~~i---~~~~~----~~~~~v~ 229 (285)
+. +..++.+++.+...+ .++.++.|+.++|..|..+.+.++.+|+++++. ++.|+.+ ..+.. .+.||+.
T Consensus 228 p~-v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~ 306 (367)
T 3us3_A 228 ST-LRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDID 306 (367)
T ss_dssp CS-EEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCC
T ss_pred cc-eeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCC
Confidence 54 457888888777654 456778899999999999999999999999974 5899999 33322 3458887
Q ss_pred -ccCeEEEEeC
Q psy159 230 -TFPALVYFRN 239 (285)
Q Consensus 230 -~~Ptl~~~~~ 239 (285)
++|+++++..
T Consensus 307 ~~~P~~~i~~~ 317 (367)
T 3us3_A 307 LSAPQIGVVNV 317 (367)
T ss_dssp TTSCEEEEEET
T ss_pred CCCCeEEEEec
Confidence 8999999974
No 17
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.93 E-value=2.5e-25 Score=184.91 Aligned_cols=155 Identities=18% Similarity=0.319 Sum_probs=134.8
Q ss_pred cchHHHHHcCCCCCCeEEEeecCccccccCCCcchHHHHHHhhcCCCc---ccccceeecChhHHHHHHhcCCcEEEEEe
Q psy159 5 SDTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWLTSQDVF---EIKNEIEEVNRRMLDKLLEENEFVTVFFY 81 (285)
Q Consensus 5 ~~~~~~~~~~i~~~Ptl~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~p---~~~~~v~~l~~~~f~~~~~~~~~~lv~Fy 81 (285)
.+.++|++|+|+++||+++|++|..+.|.|.+..+ ++.+|+.....+ ..+..+..++.++|+.++.++++++|.||
T Consensus 77 ~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~-~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~ 155 (241)
T 3idv_A 77 SASVLASRFDVSGYPTIKILKKGQAVDYEGSRTQE-EIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFY 155 (241)
T ss_dssp TCHHHHHHTTCCSSSEEEEEETTEEEECCSCSCHH-HHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEE
T ss_pred CCHHHHHhcCCCcCCEEEEEcCCCcccccCcccHH-HHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEE
Confidence 45789999999999999999999888899988777 899998765433 23456888999999999999999999999
Q ss_pred CCCChhHHHHHHHHHhHHhhcC--CCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhh
Q psy159 82 ETDHKDSVKVLERLEKIDGETD--NMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 82 a~~c~~C~~~~~~~~~~a~~~~--~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~ 156 (285)
++||++|+.+.|.|.++++.+. ..++.++.+| ++++|++|+|.++||+++|++|+.+.|.|.++.+ +|++|+.+
T Consensus 156 a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~-~l~~~l~~ 234 (241)
T 3idv_A 156 APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYDYNGPREKY-GIVDYMIE 234 (241)
T ss_dssp CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEECCSCCSHH-HHHHHHHH
T ss_pred CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEEEecCCCCHH-HHHHHHHh
Confidence 9999999999999999999983 3347888776 7899999999999999999999998899999886 99999998
Q ss_pred hcccc
Q psy159 157 QKTED 161 (285)
Q Consensus 157 ~~~~~ 161 (285)
...+.
T Consensus 235 ~~~~~ 239 (241)
T 3idv_A 235 QSGAA 239 (241)
T ss_dssp HTTCT
T ss_pred hhCCC
Confidence 87543
No 18
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.91 E-value=3.2e-23 Score=172.82 Aligned_cols=197 Identities=11% Similarity=0.203 Sum_probs=145.7
Q ss_pred ccceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC--CCcEEEEeC-----ChhHHhhhCCCCC
Q psy159 55 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA-----DPRYARKWGVTKL 126 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~--~~v~~~~~~-----~~~l~~~~~i~~~ 126 (285)
.+.|.++|.++|+..+ .++++++|.|||+||++|+++.|.|+++++.+.+ .++.++.+| ++++|++|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 4569999999999977 4558999999999999999999999999999954 347777765 5789999999999
Q ss_pred CeEEEEcccc------ceeecCCCchhHHHHHHHhhhccc---------cccccccHHHHHHHHHh--CCeEEEEEECCC
Q psy159 127 PAVVYFRHRF------PSIYRGDLSEEEEVLQWLITQKTE---------DRIELITRVMLETMVEE--TQYLAVYFYKLN 189 (285)
Q Consensus 127 Ptl~~~~~g~------~~~y~g~~~~~~~l~~fi~~~~~~---------~~v~~~~~~~~~~~~~~--~~~~~v~F~a~~ 189 (285)
||+++|++|. .+.+.| .+.+ .|.+++.+.+.. +.+..++.++++.++.. .+...+.|....
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~-~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~ 168 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQ-TLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGG 168 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHH-HHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHH-HHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECC
Confidence 9999999743 345666 5554 899998876542 22356778888887754 456777787766
Q ss_pred ChhhHHHHHHHHHHHhhcCc-CCeEEEEE--cChHHHHhcCCcccCeEEEEe-CCeEEEEecCCccchhHHHHHhhh
Q psy159 190 CNICDQILEGLEKVDDECDI-YGIHMVKI--QDPQLAKRYSIKTFPALVYFR-NGNPLIFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 190 c~~c~~~~~~~~~la~~~~~-~~i~~~~i--~~~~~~~~~~v~~~Ptl~~~~-~g~~~~y~g~~~~e~~~~~~~~~~ 262 (285)
|..++. ++..+.. ..+.+..+ ....++++|+|+++|+++++. +|+...++.... ....+..+++
T Consensus 169 ~~~~~~-------~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~~~~~--~r~~~~~~l~ 236 (244)
T 3q6o_A 169 SYLARE-------VALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLME--SRSFYTAYLQ 236 (244)
T ss_dssp CCHHHH-------HHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSS--SHHHHHHHHH
T ss_pred cchHHH-------HHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCCeEeeccccc--cHHHHHHHHH
Confidence 543322 3223332 14777777 458999999999999998875 777777775543 2334556654
No 19
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.88 E-value=3.6e-22 Score=164.77 Aligned_cols=146 Identities=15% Similarity=0.155 Sum_probs=121.4
Q ss_pred cchHHHHHcCCCCCCeEEEeecC-ccccccCCCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhcCCcE-EEEEeC
Q psy159 5 SDTEAAAKYNIINLPSLVYFRKQ-VPLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEENEFV-TVFFYE 82 (285)
Q Consensus 5 ~~~~~~~~~~i~~~Ptl~~~~~~-~~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~~~~~-lv~Fya 82 (285)
.++++|++|+|+++||+++|++| ....|.|.+... ++..|+...... ...+..+++++|+.++..++++ +|.||+
T Consensus 69 ~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~~~-~l~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~F~a 145 (229)
T 2ywm_A 69 THKEETEKYGVDRVPTIVIEGDKDYGIRYIGLPAGL-EFTTLINGIFHV--SQRKPQLSEKTLELLQVVDIPIEIWVFVT 145 (229)
T ss_dssp TCHHHHHHTTCCBSSEEEEESSSCCCEEEESCCCTT-HHHHHHHHHHHH--HTTCCSCCHHHHHHHTTCCSCEEEEEEEC
T ss_pred ccHHHHHHcCCCcCcEEEEECCCcccceecCCccHH-HHHHHHHHHHhc--cCCccCCCHHHHHHHHhcCCCeEEEEEEC
Confidence 36899999999999999999876 456799987776 888888664221 2236789999999988776666 788999
Q ss_pred CCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhhhc
Q psy159 83 TDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 83 ~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+||++|+.+.|.|+++++.+. ++.++.+| +++++++|+|.++||+++ +|+...|.|.++.+ ++.+|+.+..
T Consensus 146 ~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~~~~~~G~~~~~-~l~~~l~~~~ 219 (229)
T 2ywm_A 146 TSCGYCPSAAVMAWDFALAND--YITSKVIDASENQDLAEQFQVVGVPKIVI--NKGVAEFVGAQPEN-AFLGYIMAVY 219 (229)
T ss_dssp TTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGGTEEEESCCCHH-HHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHCC--CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCEEEEeeCCCCHH-HHHHHHHHHh
Confidence 999999999999999999884 47777776 789999999999999988 78766699998875 8999998765
No 20
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.88 E-value=1e-20 Score=167.74 Aligned_cols=226 Identities=13% Similarity=0.170 Sum_probs=164.0
Q ss_pred cchHHHHHcCCCCCCeEEEeecCccc--cccCCCcchHHHHHHhhcCCCcccccceeecC-hhHHHHHHhcCCcEEEEEe
Q psy159 5 SDTEAAAKYNIINLPSLVYFRKQVPL--LYDGDLFDEEKILTWLTSQDVFEIKNEIEEVN-RRMLDKLLEENEFVTVFFY 81 (285)
Q Consensus 5 ~~~~~~~~~~i~~~Ptl~~~~~~~~~--~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~-~~~f~~~~~~~~~~lv~Fy 81 (285)
.+.++|++|+|++|||+++|++|..+ .|.|.+..+ .|.+|+.+...|. +..++ .++++. +..++.++|.||
T Consensus 70 ~~~~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~~-~l~~~i~~~~~~~----v~~l~~~~~l~~-l~~~~~~~v~ff 143 (382)
T 2r2j_A 70 QHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVK-ALADYIRQQKSDP----IQEIRDLAEITT-LDRSKRNIIGYF 143 (382)
T ss_dssp TCHHHHHHTTCCEESEEEEEETTEEEEEECCSCCSHH-HHHHHHHHHHSCC----CEEC-------------CCEEEEEE
T ss_pred ccHHHHHhcCCCcCCEEEEEeCCcEeeeeecCcchHH-HHHHHHHHhccCC----ceecCCHHHHHH-hcCCCCEEEEEE
Confidence 35799999999999999999999654 699987766 9999999887666 67774 467877 667778899999
Q ss_pred CCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEccc---cceeecCCC-chhHHHHHHHhhh
Q psy159 82 ETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRHR---FPSIYRGDL-SEEEEVLQWLITQ 157 (285)
Q Consensus 82 a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~~g---~~~~y~g~~-~~~~~l~~fi~~~ 157 (285)
++++.. ..+.|.++|..+++. +.|+.... ++++++++.++| ++++..+ ....|.|.+ +. ++|.+|+..+
T Consensus 144 ~~~~~~---~~~~f~~~A~~~~~~-~~F~~~~~-~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~-~~l~~fi~~~ 216 (382)
T 2r2j_A 144 EQKDSD---NYRVFERVANILHDD-CAFLSAFG-DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNF-DVTYNWIQDK 216 (382)
T ss_dssp SCSSSH---HHHHHHHHHHHHTTT-CEEEEEES-CC--------CE-EEEECSSSSSCCEECCSCTTCH-HHHHHHHHHH
T ss_pred CCCCCh---hHHHHHHHHHHhhcc-ceEEEEeh-hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCH-HHHHHHHHhc
Confidence 998765 366899999998543 66665544 578899999999 6665542 347899998 55 4899999988
Q ss_pred ccccccccccHHHHHHHHHhCCeEEEEEECCCCh-hhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCc--cc
Q psy159 158 KTEDRIELITRVMLETMVEETQYLAVYFYKLNCN-ICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIK--TF 231 (285)
Q Consensus 158 ~~~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~-~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~--~~ 231 (285)
.. +.+..++.+++.++..++.++++.|+.++|. .++.+...+.+++.++++ .+.|+.+ ....+++.+|++ ++
T Consensus 217 ~~-p~v~elt~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~~~~~~~~~~gl~~~~~ 294 (382)
T 2r2j_A 217 CV-PLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCDKFRHPLLHIQKTPADC 294 (382)
T ss_dssp HS-CSSEECCHHHHHHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETTTTHHHHHHTTCCGGGC
T ss_pred cc-CceEecChhhHHHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchHHhHHHHHHcCCCccCC
Confidence 75 4556889999988888888999999999874 466677777777778876 7999999 566788899997 68
Q ss_pred CeEEEEeCCeEEEE
Q psy159 232 PALVYFRNGNPLIF 245 (285)
Q Consensus 232 Ptl~~~~~g~~~~y 245 (285)
|+++++..++...|
T Consensus 295 P~i~i~~~~~~y~~ 308 (382)
T 2r2j_A 295 PVIAIDSFRHMYVF 308 (382)
T ss_dssp SEEEEECSSCEEEC
T ss_pred CEEEEEcchhcCCC
Confidence 99999876555444
No 21
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.87 E-value=5.4e-22 Score=163.32 Aligned_cols=149 Identities=15% Similarity=0.141 Sum_probs=122.0
Q ss_pred chHHHHHcCCCCCCeEEEeecCcc--ccccCCCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhcCCcE-EEEEeC
Q psy159 6 DTEAAAKYNIINLPSLVYFRKQVP--LLYDGDLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEENEFV-TVFFYE 82 (285)
Q Consensus 6 ~~~~~~~~~i~~~Ptl~~~~~~~~--~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~~~~~-lv~Fya 82 (285)
++++|++|||+++||+++|++|.. ..|.|..... ++..|+...... ...+..+++++++.+...++++ +|.||+
T Consensus 67 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~~~-~l~~~l~~~l~~--~~~~~~l~~~~~~~~~~~~~~~~~v~F~a 143 (226)
T 1a8l_A 67 GKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAGH-EFAAFLEDIVDV--SREETNLMDETKQAIRNIDQDVRILVFVT 143 (226)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCCTT-HHHHHHHHHHHH--HHTCCCCCHHHHHHHTTCCSCEEEEEEEC
T ss_pred cHHHHHHcCCCcCceEEEEcCCceeeEEEeccCcHH-HHHHHHHHHHhh--cCCCCCCCHHHHHHHHhcCCCcEEEEEeC
Confidence 678999999999999999998853 5688887666 788887653211 1125678999999987777777 999999
Q ss_pred CCChhHHHHHHHHHhHHhhcCC---CCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccc-eeecCCCchhHHHHHHHh
Q psy159 83 TDHKDSVKVLERLEKIDGETDN---MDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFP-SIYRGDLSEEEEVLQWLI 155 (285)
Q Consensus 83 ~~c~~C~~~~~~~~~~a~~~~~---~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~-~~y~g~~~~~~~l~~fi~ 155 (285)
+||++|+++.|.|+++++.+.. .++.++.+| ++.++++|+|.++||+++|++|+. ..+.|.++.+ ++.+|+.
T Consensus 144 ~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~-~l~~~l~ 222 (226)
T 1a8l_A 144 PTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEK-MFLEKLL 222 (226)
T ss_dssp SSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHH-HHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHH-HHHHHHH
Confidence 9999999999999999998851 247888776 788999999999999999999876 5789988875 8999987
Q ss_pred hhc
Q psy159 156 TQK 158 (285)
Q Consensus 156 ~~~ 158 (285)
+.+
T Consensus 223 ~~l 225 (226)
T 1a8l_A 223 SAL 225 (226)
T ss_dssp HHH
T ss_pred Hhh
Confidence 653
No 22
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.87 E-value=2.7e-20 Score=163.79 Aligned_cols=197 Identities=14% Similarity=0.199 Sum_probs=160.7
Q ss_pred ccceeec-ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEc
Q psy159 55 KNEIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 55 ~~~v~~l-~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~ 133 (285)
++.+..+ |.+++++++...+.++|.|+.+.+..+ ...|.++|+.++ ++.|+.+.+.++|+++++.. |++.+|+
T Consensus 16 ~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~~--~~~F~~t~~~~v~~~~~v~~-~~i~lfk 89 (361)
T 3uem_A 16 SEFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAID--DIPFGITSNSDVFSKYQLDK-DGVVLFK 89 (361)
T ss_dssp CSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHCS--SSCEEEECCHHHHHHTTCSS-SEEEEEE
T ss_pred cccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcCC--CceEEEECcHHHHHHhCCCC-CeEEEEE
Confidence 3347777 568999999998999999998776654 468899999883 58999999999999999998 9999998
Q ss_pred c--ccceeecCCCchhHHHHHHHhhhccccccccccHHHHHHHHHh-CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcC
Q psy159 134 H--RFPSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEE-TQYLAVYFYKLNCNICDQILEGLEKVDDECDIY 210 (285)
Q Consensus 134 ~--g~~~~y~g~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~ 210 (285)
+ +....|+|..+.+ +|.+|+..+..+.+ ..++.+++.....+ .++++++||++||++|+++.+.|+++|+++++
T Consensus 90 ~f~~~~~~~~g~~~~~-~i~~fi~~~~~p~v-~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~- 166 (361)
T 3uem_A 90 KFDEGRNNFEGEVTKE-NLLDFIKHNQLPLV-IEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG- 166 (361)
T ss_dssp SSTTSEEECCSCCCHH-HHHHHHHHHSSCSE-EECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT-
T ss_pred ecCCCccccCCcCCHH-HHHHHHHHcCCCcc-eecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccC-
Confidence 7 5568899998875 99999999886654 57888888888766 45678999999999999999999999999997
Q ss_pred CeEEEEE--c---ChHHHHhcCCcc--cCeEEEEeCCe-EEEEe---cCCccchhHHHHHhhh
Q psy159 211 GIHMVKI--Q---DPQLAKRYSIKT--FPALVYFRNGN-PLIFE---GENKILKGTYIGTYIS 262 (285)
Q Consensus 211 ~i~~~~i--~---~~~~~~~~~v~~--~Ptl~~~~~g~-~~~y~---g~~~~e~~~~~~~~~~ 262 (285)
.+.|+.+ + ++.+++.|||.+ +|+++++..|+ ...|. |.++ .+.+..|+.+
T Consensus 167 ~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~--~~~l~~fi~~ 227 (361)
T 3uem_A 167 KILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELT--AERITEFCHR 227 (361)
T ss_dssp TCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCC--HHHHHHHHHH
T ss_pred ceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccC--HHHHHHHHHH
Confidence 6999998 3 677999999987 99999998854 34775 5554 2334555443
No 23
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.87 E-value=6.5e-21 Score=174.30 Aligned_cols=198 Identities=11% Similarity=0.220 Sum_probs=146.4
Q ss_pred ccceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC--CCcEEEEeC-----ChhHHhhhCCCCC
Q psy159 55 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA-----DPRYARKWGVTKL 126 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~--~~v~~~~~~-----~~~l~~~~~i~~~ 126 (285)
.+.|.+++.++|+..+ .++++++|.|||+||++|+++.|.|+++++.+++ .++.++.+| ++++|++|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 4569999999999876 5568999999999999999999999999999954 347787776 5789999999999
Q ss_pred CeEEEEccc----cc-eeecCCCchhHHHHHHHhhhccc---------cccccccHHHHHHHHHh--CCeEEEEEECCCC
Q psy159 127 PAVVYFRHR----FP-SIYRGDLSEEEEVLQWLITQKTE---------DRIELITRVMLETMVEE--TQYLAVYFYKLNC 190 (285)
Q Consensus 127 Ptl~~~~~g----~~-~~y~g~~~~~~~l~~fi~~~~~~---------~~v~~~~~~~~~~~~~~--~~~~~v~F~a~~c 190 (285)
||+++|++| +. ..+.|.++.+ ++.+++.+.+.. +.+..++.++++.++.. .+.+++.|.....
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~-~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s 169 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQ-TLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDS 169 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHH-HHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHH-HHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCch
Confidence 999999964 33 4566777765 899998876542 23566788888887754 5567788877642
Q ss_pred hhhHHHHHHHHHHHhhcCcC-CeEEEEE--cChHHHHhcCCcccCeEEEEe-CCeEEEEecCCccchhHHHHHhhh
Q psy159 191 NICDQILEGLEKVDDECDIY-GIHMVKI--QDPQLAKRYSIKTFPALVYFR-NGNPLIFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 191 ~~c~~~~~~~~~la~~~~~~-~i~~~~i--~~~~~~~~~~v~~~Ptl~~~~-~g~~~~y~g~~~~e~~~~~~~~~~ 262 (285)
....+++..+... .+.+..+ .+..++++|+|+++|+++++. +|+...++..... ...+..+++
T Consensus 170 -------~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~--r~~~~~~l~ 236 (519)
T 3t58_A 170 -------YLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVES--RSFYTSYLR 236 (519)
T ss_dssp -------CHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCS--HHHHHHHHT
T ss_pred -------HHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCceeeccccccc--HHHHHHHHH
Confidence 1334455555532 4777766 557899999999999999996 5555566544432 223445554
No 24
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.86 E-value=1.3e-19 Score=149.23 Aligned_cols=190 Identities=9% Similarity=0.106 Sum_probs=152.6
Q ss_pred cccccceeec-ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEE
Q psy159 52 FEIKNEIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVV 130 (285)
Q Consensus 52 p~~~~~v~~l-~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~ 130 (285)
|..++.+.++ |.+++++++.+++.++|.|+++||. .+.+.|.++|+.++ ++.|+.+.++++|+++++.+ |+|.
T Consensus 5 ~~~~~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~---~~~~~f~~~A~~l~--~~~F~~t~~~~v~~~~~v~~-p~i~ 78 (227)
T 4f9z_D 5 PGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEI---PAVPILHSMVQKFP--GVSFGISTDSEVLTHYNITG-NTIC 78 (227)
T ss_dssp ----CCCEECCSHHHHHHHHHTSSEEEEEECSCSCS---THHHHHHHHTTTCT--TSEEEEECCHHHHHHTTCCS-SEEE
T ss_pred CCCcCCCeeeCCHHHHHHHHhcCCeEEEEEecCCCc---hhHHHHHHHHHhCC--CceEEEECCHHHHHHcCCCC-CeEE
Confidence 3334445566 6799999999999999999999975 48999999999994 69999999999999999998 9999
Q ss_pred EEccc--cceeecC----CCchhHHHHHHHhhhccccccccccHHHHHHHHHhCCe-EEEEEECCCChhhHHHHHHHHHH
Q psy159 131 YFRHR--FPSIYRG----DLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQY-LAVYFYKLNCNICDQILEGLEKV 203 (285)
Q Consensus 131 ~~~~g--~~~~y~g----~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~~~~-~~v~F~a~~c~~c~~~~~~~~~l 203 (285)
+|+++ ....|.| .++.+ +|.+|+..+..|. +..++.+++.++..+..+ .++.|..+||.+|+.+.+.|+++
T Consensus 79 lfk~~~~~~~~~~~~~~g~~~~~-~l~~fi~~~~~pl-v~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~v 156 (227)
T 4f9z_D 79 LFRLVDNEQLNLEDEDIESIDAT-KLSRFIEINSLHM-VTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKA 156 (227)
T ss_dssp EEETTTTEEEEECHHHHHTCCHH-HHHHHHHHHCCCS-EEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHH
T ss_pred EEEecCcccccccccccCCCCHH-HHHHHHHHhCCCc-eeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHH
Confidence 99974 3467874 77775 8999999987654 458899999998877655 44567788999999999999999
Q ss_pred HhhcCcCCeEEEEEc-----ChHHHHhcCCc--ccCeEEEEeCCe--EEEEe-cCCc
Q psy159 204 DDECDIYGIHMVKIQ-----DPQLAKRYSIK--TFPALVYFRNGN--PLIFE-GENK 250 (285)
Q Consensus 204 a~~~~~~~i~~~~i~-----~~~~~~~~~v~--~~Ptl~~~~~g~--~~~y~-g~~~ 250 (285)
|+++++ ++.|+.++ +..+++.||+. ++|+++++..++ .+.+. |..+
T Consensus 157 Ak~~k~-~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t 212 (227)
T 4f9z_D 157 AKLFQG-KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVS 212 (227)
T ss_dssp HHHTTT-TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCC
T ss_pred HHHhhC-CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCC
Confidence 999997 69999992 34678999998 899999997433 34443 4554
No 25
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.83 E-value=4.3e-20 Score=138.19 Aligned_cols=102 Identities=14% Similarity=0.250 Sum_probs=88.9
Q ss_pred ccceeecChhHHHHHHh-cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcC----CCCcEEEEeC---ChhHHhhhCCCCC
Q psy159 55 KNEIEEVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETD----NMDITFVKMA---DPRYARKWGVTKL 126 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~-~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~----~~~v~~~~~~---~~~l~~~~~i~~~ 126 (285)
++.|.+++.++|+..+. ++++++|.|||+||++|+++.|.|+++|+.+. ..++.++.+| ++++|++|+|.++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 45699999999999985 58899999999999999999999999998762 2348888887 7899999999999
Q ss_pred CeEEEEccccc---eeecCCCchhHHHHHHHhhh
Q psy159 127 PAVVYFRHRFP---SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 127 Ptl~~~~~g~~---~~y~g~~~~~~~l~~fi~~~ 157 (285)
||+++|++|.. ..|.|.++.+ +|.+|+.+.
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~-~l~~~i~~~ 126 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLS-LVDSFVFQN 126 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHH-HHHHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccHH-HHHHHHHhc
Confidence 99999998764 6899999886 999999764
No 26
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.82 E-value=1.1e-19 Score=131.31 Aligned_cols=96 Identities=18% Similarity=0.327 Sum_probs=80.5
Q ss_pred eeec-ChhHHHHHHhc--CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 58 IEEV-NRRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 58 v~~l-~~~~f~~~~~~--~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
|.++ |.++|++.+.+ +++++|.|||+||++|+.+.|.|+++++.+.+ +.++.+| ++++|++|+|.++||+++
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~~~l~~~~~V~~~PT~~~ 79 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDECEDIAQDNQIACMPTFLF 79 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTCHHHHHHTTCCBSSEEEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccCHHHHHHcCCCeecEEEE
Confidence 4445 57899998854 57899999999999999999999999998854 6777776 789999999999999999
Q ss_pred Eccccce-eecCCCchhHHHHHHHhhh
Q psy159 132 FRHRFPS-IYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 132 ~~~g~~~-~y~g~~~~~~~l~~fi~~~ 157 (285)
|++|+.+ .+.|. +.+ +|.+||+++
T Consensus 80 ~~~G~~v~~~~G~-~~~-~l~~~i~k~ 104 (105)
T 3zzx_A 80 MKNGQKLDSLSGA-NYD-KLLELVEKN 104 (105)
T ss_dssp EETTEEEEEEESC-CHH-HHHHHHHHH
T ss_pred EECCEEEEEEeCc-CHH-HHHHHHHhc
Confidence 9999874 56774 554 899999865
No 27
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.82 E-value=2.1e-19 Score=149.47 Aligned_cols=146 Identities=13% Similarity=0.186 Sum_probs=112.4
Q ss_pred chHHHHHcCCCCCCeEEEeecCccccccCCCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhc-CCcEEEEEeCCC
Q psy159 6 DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEE-NEFVTVFFYETD 84 (285)
Q Consensus 6 ~~~~~~~~~i~~~Ptl~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~-~~~~lv~Fya~~ 84 (285)
++++|++|||+++||+++| +| ...|.|..... ++..|+...... +..-..++++.++.+..- ++.+++.|||||
T Consensus 75 ~~~~~~~~gv~~~Pt~~i~-~g-~~~~~G~~~~~-~l~~fv~~~l~~--~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~w 149 (243)
T 2hls_A 75 DSDKFSEFKVERVPTVAFL-GG-EVRWTGIPAGE-EIRALVEVIMRL--SEDESGLEDATKEALKSLKGRVHIETIITPS 149 (243)
T ss_dssp THHHHHHTTCCSSSEEEET-TT-TEEEESCCCTT-HHHHHHHHHHHH--HTTCCCCCHHHHHHHHHCCSCEEEEEEECSS
T ss_pred CHHHHHhcCCCcCCEEEEE-CC-ceeEcCCCcHH-HHHHHHHHHHhc--cCCCCCCCHHHHHHHHHcCCCcEEEEEECCC
Confidence 5789999999999999999 67 77788876555 677776542110 011223667777766543 456788999999
Q ss_pred ChhHHHHHHHHHhHHhhcC---CCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhhhc
Q psy159 85 HKDSVKVLERLEKIDGETD---NMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 85 c~~C~~~~~~~~~~a~~~~---~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~~ 158 (285)
|++|+++.|.|++++..+. ..++.++.+| +++++++|+|.++||+++ +|+. .|.|.++.+ +|++++.+..
T Consensus 150 C~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~-~~~G~~~~~-~l~~~l~~~~ 225 (243)
T 2hls_A 150 CPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYL-VFVGVPYEE-DFLDYVKSAA 225 (243)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEE-EEESCCCHH-HHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEE-EEeCCCCHH-HHHHHHHHHh
Confidence 9999999999999998882 1458888776 788999999999999988 7764 499999876 8999998876
Q ss_pred cc
Q psy159 159 TE 160 (285)
Q Consensus 159 ~~ 160 (285)
..
T Consensus 226 ~~ 227 (243)
T 2hls_A 226 EG 227 (243)
T ss_dssp TT
T ss_pred hc
Confidence 43
No 28
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.80 E-value=1.1e-18 Score=126.00 Aligned_cols=83 Identities=19% Similarity=0.462 Sum_probs=73.7
Q ss_pred ccccHHHHHHHHHh--CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 164 ELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 164 ~~~~~~~~~~~~~~--~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
.+.+.++|++.+.+ +++++|.|||+||++|+.+.|.++++++.+. ++.|+.+ ++++++++|+|+++||+++|+
T Consensus 4 ~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~ 81 (105)
T 3zzx_A 4 QVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDECEDIAQDNQIACMPTFLFMK 81 (105)
T ss_dssp ECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCCBSSEEEEEE
T ss_pred EeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEecccCHHHHHHcCCCeecEEEEEE
Confidence 44577889998765 6789999999999999999999999999987 4889888 789999999999999999999
Q ss_pred CCeEE-EEecC
Q psy159 239 NGNPL-IFEGE 248 (285)
Q Consensus 239 ~g~~~-~y~g~ 248 (285)
+|+.+ ++.|.
T Consensus 82 ~G~~v~~~~G~ 92 (105)
T 3zzx_A 82 NGQKLDSLSGA 92 (105)
T ss_dssp TTEEEEEEESC
T ss_pred CCEEEEEEeCc
Confidence 99987 67773
No 29
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=9e-19 Score=133.05 Aligned_cols=106 Identities=19% Similarity=0.277 Sum_probs=93.7
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC--CCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~--~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
.+.|..++.++|+..+.++++++|.||++||++|+++.|.|+++++.+.+ .++.++.+| +..++++|+|.++||+
T Consensus 16 ~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 95 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTI 95 (140)
T ss_dssp ETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEE
T ss_pred CCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeE
Confidence 34588999999999998899999999999999999999999999998843 348888887 6789999999999999
Q ss_pred EEEccccceeecCCCchhHHHHHHHhhhcccc
Q psy159 130 VYFRHRFPSIYRGDLSEEEEVLQWLITQKTED 161 (285)
Q Consensus 130 ~~~~~g~~~~y~g~~~~~~~l~~fi~~~~~~~ 161 (285)
++|++|+...|.|.++.+ +|.+|+.+.+.++
T Consensus 96 ~~~~~G~~~~~~g~~~~~-~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 96 KILKKGQAVDYDGSRTQE-EIVAKVREVSQPD 126 (140)
T ss_dssp EEEETTEEEECCSCCCHH-HHHHHHHHHHSSS
T ss_pred EEEECCcEEEcCCCCCHH-HHHHHHHHhcCCC
Confidence 999999877899988876 8999999887543
No 30
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.79 E-value=1.5e-18 Score=126.23 Aligned_cols=101 Identities=12% Similarity=0.224 Sum_probs=87.9
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC--CCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~--~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
++.+..+|+++|++.+. +++++|.||++||++|+.+.|.|+++++.+.. .++.++.+| ++++|++|+|.++||+
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 45689999999999988 77999999999999999999999999998732 358888777 7789999999999999
Q ss_pred EEEccccc-eeecCCCchhHHHHHHHhhh
Q psy159 130 VYFRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 130 ~~~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
++|++|+. ..+.|..+.+ ++.+|+.++
T Consensus 83 ~~~~~g~~~~~~~g~~~~~-~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGKKVSEHSGGRDLD-SLHRFVLSQ 110 (111)
T ss_dssp EEEETTEEEEEECSCCSHH-HHHHHHHHH
T ss_pred EEEeCCcEEEeccCCcCHH-HHHHHHHhc
Confidence 99999877 5789988875 899999764
No 31
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.79 E-value=1e-18 Score=131.08 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=89.3
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCC--ChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEE
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETD--HKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~--c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~ 132 (285)
+..+|+++|++.+.+++++||+|||+| |++|+.+.|.++++|+++.+..+.++++| +++++.+|||.++||+++|
T Consensus 19 ~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilF 98 (140)
T 2qgv_A 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVF 98 (140)
T ss_dssp CEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEEE
T ss_pred CccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEEE
Confidence 778999999999888889999999999 99999999999999999965337888887 8899999999999999999
Q ss_pred ccccce-eecCCCchhHHHHHHHhhhcc
Q psy159 133 RHRFPS-IYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 133 ~~g~~~-~y~g~~~~~~~l~~fi~~~~~ 159 (285)
++|+.+ ...|..... .+.+++.+.+.
T Consensus 99 k~G~~v~~~~G~~~k~-~l~~~i~~~l~ 125 (140)
T 2qgv_A 99 TGGNYRGVLNGIHPWA-ELINLMRGLVE 125 (140)
T ss_dssp ETTEEEEEEESCCCHH-HHHHHHHHHHC
T ss_pred ECCEEEEEEecCCCHH-HHHHHHHHHhc
Confidence 999984 577887765 89999987664
No 32
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.78 E-value=2.6e-18 Score=124.98 Aligned_cols=100 Identities=18% Similarity=0.359 Sum_probs=88.0
Q ss_pred ceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEE
Q psy159 57 EIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 57 ~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~ 132 (285)
.+..+|.++|++.+ .++++++|.||++||++|+.+.|.++++++.+++ ++.++.+| ++.++++|+|.++||+++|
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 83 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKTLFQRFSLKGVPQILYF 83 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChhHHHhcCCCcCCEEEEE
Confidence 48889999999998 7789999999999999999999999999999864 37777766 7889999999999999999
Q ss_pred ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 133 RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 133 ~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++|+. ..+.|..+.+ ++.+|+.+.+
T Consensus 84 ~~g~~~~~~~g~~~~~-~l~~~l~~~l 109 (111)
T 3gnj_A 84 KDGEYKGKMAGDVEDD-EVEQMIADVL 109 (111)
T ss_dssp ETTEEEEEEESSCCHH-HHHHHHHHHH
T ss_pred ECCEEEEEEeccCCHH-HHHHHHHHHh
Confidence 99987 4688988875 8999988754
No 33
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.78 E-value=2.1e-18 Score=142.88 Aligned_cols=142 Identities=8% Similarity=0.111 Sum_probs=113.3
Q ss_pred cccceeecChhHHHHHHhcCCcEEEEEe--CCCChhHHHHHHHHHhHHhhcC--CCCcEEEEeC--------ChhHHhhh
Q psy159 54 IKNEIEEVNRRMLDKLLEENEFVTVFFY--ETDHKDSVKVLERLEKIDGETD--NMDITFVKMA--------DPRYARKW 121 (285)
Q Consensus 54 ~~~~v~~l~~~~f~~~~~~~~~~lv~Fy--a~~c~~C~~~~~~~~~~a~~~~--~~~v~~~~~~--------~~~l~~~~ 121 (285)
.++.|..+|+++|++++.++++++|.|| ||||+ +.|.|+++|+.+. ..++.|+++| ++++|++|
T Consensus 14 ~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 14 TCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp -CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 3455889999999998888899999999 99998 9999999999984 3458888876 47899999
Q ss_pred CCC--CCCeEEEEcccc---ceee--cCCCchhHHHHHHHhhhccccccccccHHHHHHHHHhCCeEEEEEECCCChhhH
Q psy159 122 GVT--KLPAVVYFRHRF---PSIY--RGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCNICD 194 (285)
Q Consensus 122 ~i~--~~Ptl~~~~~g~---~~~y--~g~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~ 194 (285)
+|. ++||+++|+ |. +..| .|.++.+ +|.+|+.+......-..-....++.++. .|.+.||..|.
T Consensus 90 ~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~-~L~~fi~~~~~~~~~~~g~i~~~d~l~~-------~f~~~~~~~~~ 160 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLD-NLKAFVSANTPLYIGRDGCIKEFNEVLK-------NYANIPDAEQL 160 (248)
T ss_dssp TCCTTSCCEEEEES-SSSSSEEECCTTSCCCHH-HHHHHHHHHSSCCCCCTTCCHHHHHHHT-------TGGGSCHHHHH
T ss_pred CCCcCCCCeEEEEe-CCcCcceeecccCCCCHH-HHHHHHHHhhccccCCCCchHHHHHHHH-------HHhcccchhHH
Confidence 999 999999999 87 3678 8999886 9999999886421111222344555553 36778999999
Q ss_pred HHHHHHHHHHhhcC
Q psy159 195 QILEGLEKVDDECD 208 (285)
Q Consensus 195 ~~~~~~~~la~~~~ 208 (285)
.+.+.+++++..+.
T Consensus 161 ~~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 161 KLIEKLQAKQEQLT 174 (248)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcc
Confidence 99999998887764
No 34
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.78 E-value=2.9e-18 Score=124.15 Aligned_cols=101 Identities=13% Similarity=0.165 Sum_probs=88.7
Q ss_pred cceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEE
Q psy159 56 NEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~ 132 (285)
+.+..+|.++|+..+.++++++|.||++||++|+.+.|.++++++.+++ ++.++.+| ++.++++|+|.++|++++|
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCcccCCEEEEE
Confidence 3488999999999999999999999999999999999999999999864 37777665 7899999999999999999
Q ss_pred ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 133 RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 133 ~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++|+. ..+.|..+.+ ++.+++.+.+
T Consensus 83 ~~g~~~~~~~g~~~~~-~l~~~l~~~l 108 (109)
T 3tco_A 83 VNGQLVDSLVGAVDED-TLESTVNKYL 108 (109)
T ss_dssp ETTEEEEEEESCCCHH-HHHHHHHHHC
T ss_pred cCCcEEEeeeccCCHH-HHHHHHHHHh
Confidence 88877 5688988875 8999987653
No 35
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=1.6e-18 Score=129.35 Aligned_cols=102 Identities=12% Similarity=0.243 Sum_probs=88.7
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
.+.|..+|.++|+++++. +++|.||++||++|+++.|.++++++.+.+.++.++.+| +..++++|+|.++||+++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYH 83 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEE
Confidence 345889999999987754 399999999999999999999999998865457888776 788999999999999999
Q ss_pred EccccceeecCCCchhHHHHHHHhhhcc
Q psy159 132 FRHRFPSIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 132 ~~~g~~~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|++|+...+.|..+.+ ++.+|+.+...
T Consensus 84 ~~~G~~~~~~G~~~~~-~l~~~l~~~~~ 110 (126)
T 1x5e_A 84 CKDGEFRRYQGPRTKK-DFINFISDKEW 110 (126)
T ss_dssp EETTEEEECCSCCCHH-HHHHHHHTCGG
T ss_pred EeCCeEEEeecCCCHH-HHHHHHHHHhh
Confidence 9999877899988875 89999988764
No 36
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.77 E-value=1.9e-18 Score=129.11 Aligned_cols=99 Identities=11% Similarity=0.134 Sum_probs=86.6
Q ss_pred eeecChhHHHHHHhcCC-cEEEEEeCCCC--hhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 58 IEEVNRRMLDKLLEENE-FVTVFFYETDH--KDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~-~~lv~Fya~~c--~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
...+|+++|++.+.+++ +++|+|||+|| ++|+.+.|.++++++++.+. +.++++| +++++.+|||.++||+++
T Consensus 17 ~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvDe~~~la~~ygV~siPTlil 95 (137)
T 2qsi_A 17 PTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAEAERGLMARFGVAVCPSLAV 95 (137)
T ss_dssp CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGGGHHHHHHHHTCCSSSEEEE
T ss_pred CcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCccCCEEEE
Confidence 55789999999886665 99999999999 99999999999999999653 8888877 789999999999999999
Q ss_pred Eccccce-eecCCCchhHHHHHHHhhhc
Q psy159 132 FRHRFPS-IYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 132 ~~~g~~~-~y~g~~~~~~~l~~fi~~~~ 158 (285)
|++|+.+ ...|..... .+.+++.+.+
T Consensus 96 FkdG~~v~~~vG~~~k~-~l~~~l~~~l 122 (137)
T 2qsi_A 96 VQPERTLGVIAKIQDWS-SYLAQIGAML 122 (137)
T ss_dssp EECCEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred EECCEEEEEEeCCCCHH-HHHHHHHHHh
Confidence 9999984 577888765 8989987655
No 37
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.77 E-value=3.4e-18 Score=125.82 Aligned_cols=99 Identities=14% Similarity=0.207 Sum_probs=85.0
Q ss_pred ccceeecChhHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 55 KNEIEEVNRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
+......|.++|++++. ++++++|.||++||++|+.+.|.|+++++.+.+ +.++.+| ++.++++|+|.++||+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCccccEE
Confidence 34477789999999998 789999999999999999999999999999865 7777666 7899999999999999
Q ss_pred EEEccccc-eeecCCCchhHHHHHHHhhh
Q psy159 130 VYFRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 130 ~~~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
++|++|+. ..+.|. +.+ .|.+++.+.
T Consensus 89 ~~~~~G~~~~~~~G~-~~~-~l~~~l~~~ 115 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NKE-KLEATINEL 115 (116)
T ss_dssp EEESSSSEEEEEESC-CHH-HHHHHHHHH
T ss_pred EEEeCCeEEEEEcCC-CHH-HHHHHHHHh
Confidence 99998877 457888 654 899998764
No 38
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.77 E-value=2.1e-18 Score=126.00 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=89.4
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEcc
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRH 134 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~ 134 (285)
+.+++.++|++.+ ++++++|.||++||++|+.+.|.++++++.+++ ++.++.+| +++++++|+|.++||+++|++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 80 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQETAGKYGVMSIPTLLVLKD 80 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTCCSHHHHTTCCSBSEEEEEET
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCCcccEEEEEeC
Confidence 6789999999998 889999999999999999999999999999854 47777776 678999999999999999988
Q ss_pred ccc-eeecCCCchhHHHHHHHhhhccccc
Q psy159 135 RFP-SIYRGDLSEEEEVLQWLITQKTEDR 162 (285)
Q Consensus 135 g~~-~~y~g~~~~~~~l~~fi~~~~~~~~ 162 (285)
|+. ..+.|..+.+ ++.+|+.+...++.
T Consensus 81 G~~~~~~~G~~~~~-~l~~~l~~~~~~~~ 108 (112)
T 2voc_A 81 GEVVETSVGFKPKE-ALQELVNKHLLEHH 108 (112)
T ss_dssp TEEEEEEESCCCHH-HHHHHHHTTSCSCC
T ss_pred CEEEEEEeCCCCHH-HHHHHHHHHHHhhc
Confidence 886 5688998876 89999998876543
No 39
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.77 E-value=1.9e-18 Score=131.21 Aligned_cols=100 Identities=14% Similarity=0.216 Sum_probs=83.0
Q ss_pred eeec-ChhHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 58 IEEV-NRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 58 v~~l-~~~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+..+ |.++|++.+. ++++++|.|||+||++|+.+.|.++++|+++.+. +.|+++| .++++++|+|.+.||+++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~~e~a~~y~V~siPT~~f 101 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEVPDFNTMYELYDPVSVMF 101 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTTTTCCSSEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCCCCCEEEE
Confidence 5556 5789998774 5689999999999999999999999999999543 6777766 789999999999999999
Q ss_pred Eccccce----------eecCCCchhHHHHHHHhhhc
Q psy159 132 FRHRFPS----------IYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 132 ~~~g~~~----------~y~g~~~~~~~l~~fi~~~~ 158 (285)
|++|+.+ +..|.....++|.++|+...
T Consensus 102 Fk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 102 FYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 9999886 57787662347888886654
No 40
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.77 E-value=1e-18 Score=128.73 Aligned_cols=106 Identities=16% Similarity=0.373 Sum_probs=92.0
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC--CCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~--~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
.+.|..++.++|+..+.++++++|.||++||++|+++.|.++++++.++. .++.++.+| ++.++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 45589999999999999999999999999999999999999999998853 357788776 5789999999999999
Q ss_pred EEEccccc---eeecCCCchhHHHHHHHhhhcccc
Q psy159 130 VYFRHRFP---SIYRGDLSEEEEVLQWLITQKTED 161 (285)
Q Consensus 130 ~~~~~g~~---~~y~g~~~~~~~l~~fi~~~~~~~ 161 (285)
++|++|+. ..|.|..+.+ ++.+|+.+.+.++
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~-~l~~~l~~~~~~~ 119 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREAD-DIVNWLKKRTGPA 119 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHH-HHHHHHHTTSCCC
T ss_pred EEEeCCCcCCcccccCccCHH-HHHHHHHhccCCC
Confidence 99998875 5788988875 8999998876543
No 41
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.76 E-value=6.8e-18 Score=121.64 Aligned_cols=98 Identities=20% Similarity=0.305 Sum_probs=86.1
Q ss_pred ceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEc
Q psy159 57 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 57 ~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 133 (285)
.+.+++.++|++.+ ++++++|.||++||++|+.+.|.++++++.+++. +.++.+| ++.++++|+|.++||+++|+
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 38889999999999 8899999999999999999999999999999653 7777665 78899999999999999999
Q ss_pred cccc-eeecCCCchhHHHHHHHhhh
Q psy159 134 HRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 134 ~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
+|+. ..+.|..+.+ ++.+++.+.
T Consensus 82 ~G~~~~~~~g~~~~~-~l~~~l~~~ 105 (106)
T 3die_A 82 DGQPVDKVVGFQPKE-NLAEVLDKH 105 (106)
T ss_dssp TTEEEEEEESCCCHH-HHHHHHHTT
T ss_pred CCeEEEEEeCCCCHH-HHHHHHHHh
Confidence 8877 4688988875 899998764
No 42
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.76 E-value=6.5e-18 Score=121.68 Aligned_cols=99 Identities=15% Similarity=0.243 Sum_probs=85.8
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEcc
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRH 134 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~ 134 (285)
|.++++++|+..+.++++++|.||++||++|+.+.|.++++++.+.+. +.++.+| ++.++++|+|.++||++++++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 80 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDENPETTSQFGIMSIPTLILFKG 80 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcCCHHHHHHcCCccccEEEEEeC
Confidence 678999999988888899999999999999999999999999998543 7777665 788999999999999999988
Q ss_pred ccc-eeecCCCchhHHHHHHHhhhc
Q psy159 135 RFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 135 g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
|+. ..+.|..+.+ ++.+++.+.+
T Consensus 81 G~~~~~~~G~~~~~-~l~~~l~~~l 104 (105)
T 1nsw_A 81 GRPVKQLIGYQPKE-QLEAQLADVL 104 (105)
T ss_dssp TEEEEEEESCCCHH-HHHHHTTTTT
T ss_pred CeEEEEEecCCCHH-HHHHHHHHHh
Confidence 876 4588888775 8999887643
No 43
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.76 E-value=8.9e-18 Score=128.91 Aligned_cols=106 Identities=17% Similarity=0.333 Sum_probs=92.2
Q ss_pred cccccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCe
Q psy159 52 FEIKNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 128 (285)
Q Consensus 52 p~~~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Pt 128 (285)
|.....+..++.++|+..+.++++++|.||++||++|+.+.|.|+++++.+++. +.++.+| ++.++++|+|.++||
T Consensus 34 ~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt 112 (148)
T 3p2a_A 34 SLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTEAEPALSTRFRIRSIPT 112 (148)
T ss_dssp BTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECcCCHHHHHHCCCCccCE
Confidence 334566999999999999988899999999999999999999999999998543 7777776 789999999999999
Q ss_pred EEEEccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 129 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 129 l~~~~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+++|++|+. ..+.|..+.+ ++.+|+.+.+.
T Consensus 113 ~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~l~ 143 (148)
T 3p2a_A 113 IMLYRNGKMIDMLNGAVPKA-PFDNWLDEQLS 143 (148)
T ss_dssp EEEEETTEEEEEESSCCCHH-HHHHHHHHHHH
T ss_pred EEEEECCeEEEEEeCCCCHH-HHHHHHHHHhc
Confidence 999999887 4688988875 89999987654
No 44
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.75 E-value=1e-17 Score=129.70 Aligned_cols=104 Identities=12% Similarity=0.215 Sum_probs=90.6
Q ss_pred cccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEE
Q psy159 54 IKNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 54 ~~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
.++.+.+++.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+. +.++.+| ++.++++|+|.++||++
T Consensus 45 ~~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 123 (155)
T 2ppt_A 45 ITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQAHPAVAGRHRIQGIPAFI 123 (155)
T ss_dssp CCSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTTSTHHHHHTTCCSSSEEE
T ss_pred cCCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCccHHHHHHcCCCcCCEEE
Confidence 3556889999999999877899999999999999999999999999999643 8888776 77899999999999999
Q ss_pred EEccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 131 YFRHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 131 ~~~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+|++|+. ..+.|..+.+ +|.+|+.+.+.
T Consensus 124 ~~~~G~~~~~~~G~~~~~-~l~~~l~~~l~ 152 (155)
T 2ppt_A 124 LFHKGRELARAAGARPAS-ELVGFVRGKLG 152 (155)
T ss_dssp EEETTEEEEEEESCCCHH-HHHHHHHHHHC
T ss_pred EEeCCeEEEEecCCCCHH-HHHHHHHHHhc
Confidence 9998887 4688988775 89999987653
No 45
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.75 E-value=8.2e-18 Score=121.75 Aligned_cols=100 Identities=19% Similarity=0.323 Sum_probs=85.8
Q ss_pred cceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 56 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+.|..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+++ ++.++.+| ++.++++|+|.++||+++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCTTHHHHTTCCSSSEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCcccCEEEE
Confidence 458889999998664 6778999999999999999999999999998854 37777776 678999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhh
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
|++|+. ..+.|..+.+ ++.+++.+.
T Consensus 81 ~~~G~~~~~~~G~~~~~-~l~~~l~~~ 106 (108)
T 2trx_A 81 FKNGEVAATKVGALSKG-QLKEFLDAN 106 (108)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHH
T ss_pred EeCCEEEEEEecCCCHH-HHHHHHHHh
Confidence 988876 4588888775 899998764
No 46
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.75 E-value=1e-17 Score=120.88 Aligned_cols=100 Identities=17% Similarity=0.262 Sum_probs=86.3
Q ss_pred cceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 56 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+.|.+++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+| ++.++++|+|.++|++++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNPETPNAYQVRSIPTLML 80 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCHHHHHTTCCSSSEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCHHHHHhcCCCccCEEEE
Confidence 358899999998775 6778999999999999999999999999999864 47777776 678999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhh
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
|++|+. ..+.|..+.+ ++.+|+.+.
T Consensus 81 ~~~G~~~~~~~G~~~~~-~l~~~l~~~ 106 (107)
T 2i4a_A 81 VRDGKVIDKKVGALPKS-QLKAWVESA 106 (107)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHT
T ss_pred EeCCEEEEEecCCCCHH-HHHHHHHhc
Confidence 988887 4588888775 899998764
No 47
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.75 E-value=7.4e-18 Score=128.23 Aligned_cols=102 Identities=19% Similarity=0.235 Sum_probs=88.9
Q ss_pred cceeecChhHHH-HHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 56 NEIEEVNRRMLD-KLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 56 ~~v~~l~~~~f~-~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+.+..++.++|+ .++.++++++|.||++||++|+.+.|.|+++++.+.+. +.++.+| ++++|++|+|.++||+++
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 458999999999 55677899999999999999999999999999999653 7777766 789999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|++|+. ..+.|..+.+ ++.+|+.+.+.
T Consensus 85 ~~~G~~~~~~~G~~~~~-~l~~~l~~~l~ 112 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIYPS-ILKNAVRDMLQ 112 (140)
T ss_dssp EETTEEEEEEESSCCHH-HHHHHHHHHHH
T ss_pred EeCCcEEEEEcCCCCHH-HHHHHHHHHhc
Confidence 999987 4688988775 89999987764
No 48
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.75 E-value=1.2e-17 Score=119.77 Aligned_cols=98 Identities=20% Similarity=0.389 Sum_probs=85.8
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEcc
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRH 134 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~ 134 (285)
|.++|.++|++.+.++++++|.||++||++|+.+.|.++++++.+.+ +.++.+| ++.++++|++.++||+++|++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 78 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENPDIAARYGVMSLPTVIFFKD 78 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSCEEEEEET
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCHHHHHhCCccccCEEEEEEC
Confidence 46789999999998889999999999999999999999999999865 6777665 788999999999999999988
Q ss_pred ccc-eeecCCCchhHHHHHHHhhhc
Q psy159 135 RFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 135 g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
|+. ..+.|..+.+ ++.+|+.+.+
T Consensus 79 g~~~~~~~g~~~~~-~l~~~l~~~l 102 (104)
T 2e0q_A 79 GEPVDEIIGAVPRE-EIEIRIKNLL 102 (104)
T ss_dssp TEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred CeEhhhccCCCCHH-HHHHHHHHHh
Confidence 887 4688988775 8999987654
No 49
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.75 E-value=1.3e-17 Score=120.71 Aligned_cols=101 Identities=20% Similarity=0.313 Sum_probs=87.9
Q ss_pred ceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEc
Q psy159 57 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 57 ~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 133 (285)
.|.+++.++|+.++.++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+| ++.++++|+|.++|++++|+
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 478899999998888899999999999999999999999999998854 37777776 78899999999999999998
Q ss_pred cccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 134 HRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 134 ~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+|+. ..+.|..+.+ ++.+|+.+.+.
T Consensus 81 ~g~~~~~~~g~~~~~-~l~~~l~~~l~ 106 (109)
T 2yzu_A 81 DGQPVEVLVGAQPKR-NYQAKIEKHLP 106 (109)
T ss_dssp TTEEEEEEESCCCHH-HHHHHHHTTC-
T ss_pred CCcEeeeEeCCCCHH-HHHHHHHHHhh
Confidence 8886 4588988775 89999987653
No 50
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.75 E-value=1.5e-17 Score=125.78 Aligned_cols=102 Identities=14% Similarity=0.224 Sum_probs=88.7
Q ss_pred cceeecChhHHHHHHh------------cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhh
Q psy159 56 NEIEEVNRRMLDKLLE------------ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARK 120 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~------------~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~ 120 (285)
..+.++|+++|++.+. ++++++|.||++||++|+++.|.++++++.+++ ++.++.+| ++.++++
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHH
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHH
Confidence 3588899999999875 457899999999999999999999999999854 37777766 6789999
Q ss_pred hCCCCCCeEEEE-ccccceeecCCCchhHHHHHHHhhhcc
Q psy159 121 WGVTKLPAVVYF-RHRFPSIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 121 ~~i~~~Ptl~~~-~~g~~~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|+|.++||+++| ++|+...+.|..+.+ +|.+++.+...
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~~~~G~~~~~-~l~~~l~~~~~ 126 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPEMAQGAMPKA-SFKKAIDEFLL 126 (136)
T ss_dssp TTCCSSCEEEEECSSSCCEEEESCCCHH-HHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCCcEEEEeCCCCHH-HHHHHHHHHhh
Confidence 999999999999 778888899988876 89999988764
No 51
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.75 E-value=1.3e-17 Score=126.72 Aligned_cols=102 Identities=21% Similarity=0.317 Sum_probs=87.2
Q ss_pred ccceeecChhHHHHHHhc------------CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHh
Q psy159 55 KNEIEEVNRRMLDKLLEE------------NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYAR 119 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~------------~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~ 119 (285)
+..+..++.++|+..+.+ +++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+| ++.+++
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELAR 99 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHH
Confidence 445899999999998764 68999999999999999999999999999964 37777666 789999
Q ss_pred hhCCCCCCeEEEEc-cccceeecCCCchhHHHHHHHhhhc
Q psy159 120 KWGVTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 120 ~~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|+|.++||+++|. +|+...+.|..+.+ +|.+++.+.+
T Consensus 100 ~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~-~l~~~l~~~l 138 (141)
T 3hxs_A 100 DFGIQSIPTIWFVPMKGEPQVNMGALSKE-QLKGYIDKVL 138 (141)
T ss_dssp HTTCCSSSEEEEECSSSCCEEEESCCCHH-HHHHHHHHTT
T ss_pred HcCCCCcCEEEEEeCCCCEEEEeCCCCHH-HHHHHHHHHH
Confidence 99999999999994 57777899998876 8999998764
No 52
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.75 E-value=7.9e-18 Score=125.73 Aligned_cols=90 Identities=9% Similarity=0.193 Sum_probs=79.5
Q ss_pred cccccccHHHHHHHHHhCC-eEEEEEECCCC--hhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 161 DRIELITRVMLETMVEETQ-YLAVYFYKLNC--NICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~~~-~~~v~F~a~~c--~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
.....++.++|++.+.+.+ +++|+|||+|| ++|+.+.|++++++++|.+ +++|+++ ++++++.+|+|+++||+
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAERGLMARFGVAVCPSL 93 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGHHHHHHHHTCCSSSEE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCCHHHHHHcCCccCCEE
Confidence 3445778899999887655 99999999999 9999999999999999986 7999999 78899999999999999
Q ss_pred EEEeCCeEE-EEecCCcc
Q psy159 235 VYFRNGNPL-IFEGENKI 251 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~~~~ 251 (285)
++|++|+.+ +..|....
T Consensus 94 ilFkdG~~v~~~vG~~~k 111 (137)
T 2qsi_A 94 AVVQPERTLGVIAKIQDW 111 (137)
T ss_dssp EEEECCEEEEEEESCCCH
T ss_pred EEEECCEEEEEEeCCCCH
Confidence 999999988 77887763
No 53
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.75 E-value=7.1e-18 Score=126.46 Aligned_cols=88 Identities=14% Similarity=0.117 Sum_probs=80.7
Q ss_pred ccccccHHHHHHHHHhCCeEEEEEECCC--ChhhHHHHHHHHHHHhhcCcCC-eEEEEE---cChHHHHhcCCcccCeEE
Q psy159 162 RIELITRVMLETMVEETQYLAVYFYKLN--CNICDQILEGLEKVDDECDIYG-IHMVKI---QDPQLAKRYSIKTFPALV 235 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~~~v~F~a~~--c~~c~~~~~~~~~la~~~~~~~-i~~~~i---~~~~~~~~~~v~~~Ptl~ 235 (285)
.+..++.++|++.+.++++++|+||++| |++|+.+.|++++++++|.+ + ++|+++ ++++++.+|+|+++||++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g-~~v~~~KVdvDe~~~lA~~ygV~sIPTli 96 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD-YTWQVAIADLEQSEAIGDRFGAFRFPATL 96 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT-SCCEEEECCHHHHHHHHHHHTCCSSSEEE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC-CeEEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 5558899999998888889999999999 99999999999999999987 7 999999 789999999999999999
Q ss_pred EEeCCeEE-EEecCCc
Q psy159 236 YFRNGNPL-IFEGENK 250 (285)
Q Consensus 236 ~~~~g~~~-~y~g~~~ 250 (285)
+|++|+.+ +..|...
T Consensus 97 lFk~G~~v~~~~G~~~ 112 (140)
T 2qgv_A 97 VFTGGNYRGVLNGIHP 112 (140)
T ss_dssp EEETTEEEEEEESCCC
T ss_pred EEECCEEEEEEecCCC
Confidence 99999988 7778775
No 54
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=5.8e-18 Score=127.28 Aligned_cols=104 Identities=13% Similarity=0.251 Sum_probs=89.2
Q ss_pred ccceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC---CCcEEEEeC---ChhHHhhhCCCCCC
Q psy159 55 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDN---MDITFVKMA---DPRYARKWGVTKLP 127 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~---~~v~~~~~~---~~~l~~~~~i~~~P 127 (285)
.+.+..++.++|+..+ .++++++|.||++||++|+.+.|.|.++++.++. .++.++.+| ++.+|++|+|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 3458899999999876 6678999999999999999999999999998851 348888876 67899999999999
Q ss_pred eEEEEccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 128 AVVYFRHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 128 tl~~~~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|+++|++|+. ..|.|.++.+ ++.+|+.+...
T Consensus 86 t~~~~~~g~~~~~~~G~~~~~-~l~~~l~~~~~ 117 (133)
T 1x5d_A 86 TIKIFQKGESPVDYDGGRTRS-DIVSRALDLFS 117 (133)
T ss_dssp EEEEEETTEEEEEECSCCSHH-HHHHHHHHHHH
T ss_pred eEEEEeCCCceEEecCCCCHH-HHHHHHHHHhh
Confidence 9999999875 6789988875 89999987653
No 55
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.75 E-value=1.7e-17 Score=120.58 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=83.7
Q ss_pred cceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEE
Q psy159 56 NEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~ 132 (285)
......+.++|+..+.++++++|.||++||++|+.+.|.++++++.+.+ +.++.+| ++.++++|+|.++||+++|
T Consensus 7 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 84 (109)
T 3f3q_A 7 MVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDELGDVAQKNEVSAMPTLLLF 84 (109)
T ss_dssp CCEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 3466778999999999999999999999999999999999999999864 6666555 7899999999999999999
Q ss_pred ccccc-eeecCCCchhHHHHHHHhhh
Q psy159 133 RHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 133 ~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
++|+. ..+.|. ..+ +|.+++.+.
T Consensus 85 ~~G~~~~~~~G~-~~~-~l~~~i~~~ 108 (109)
T 3f3q_A 85 KNGKEVAKVVGA-NPA-AIKQAIAAN 108 (109)
T ss_dssp ETTEEEEEEESS-CHH-HHHHHHHHH
T ss_pred ECCEEEEEEeCC-CHH-HHHHHHHhh
Confidence 98877 457787 444 899988764
No 56
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=7.5e-18 Score=126.25 Aligned_cols=103 Identities=13% Similarity=0.266 Sum_probs=88.3
Q ss_pred ccceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEE
Q psy159 55 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
.+.+..++.++|+..+ .++++++|.||++||++|+++.|.|+++++.+++. +.++.+| +..++++|+|.++||++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADKHQSLGGQYGVQGFPTIK 94 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCCCHHHHHHcCCCccCEEE
Confidence 4558899999999864 66789999999999999999999999999998653 7777766 78899999999999999
Q ss_pred EEcccc--ceeecCCCchhHHHHHHHhhhcc
Q psy159 131 YFRHRF--PSIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 131 ~~~~g~--~~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+|++|. ...|.|.++.+ ++.+|+.+.+.
T Consensus 95 ~~~~~~~~~~~~~G~~~~~-~l~~~l~~~l~ 124 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGE-AIVDAALSALR 124 (130)
T ss_dssp EESSCTTSCEECCSCCSHH-HHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHH-HHHHHHHHHHh
Confidence 999865 46789988875 89999987653
No 57
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.74 E-value=1.1e-17 Score=130.96 Aligned_cols=104 Identities=9% Similarity=0.056 Sum_probs=86.2
Q ss_pred cceeecChhHHHHHHhc--CCcEEEEEeC-------CCChhHHHHHHHHHhHHhhcCC----CCcEEEEeC---ChhHHh
Q psy159 56 NEIEEVNRRMLDKLLEE--NEFVTVFFYE-------TDHKDSVKVLERLEKIDGETDN----MDITFVKMA---DPRYAR 119 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~~--~~~~lv~Fya-------~~c~~C~~~~~~~~~~a~~~~~----~~v~~~~~~---~~~l~~ 119 (285)
+.|.++|+++|++++.. +.+++|+||| +||++|+.+.|.|+++|+++.. .++.|+++| ++++++
T Consensus 18 ~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~ 97 (178)
T 3ga4_A 18 TGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVK 97 (178)
T ss_dssp TSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHH
T ss_pred CCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHH
Confidence 34899999999998864 4579999999 4999999999999999998841 248888887 899999
Q ss_pred hhCCCCCCeEEEEccccc-------------eee---cC-CCchhHHHHHHHhhhccc
Q psy159 120 KWGVTKLPAVVYFRHRFP-------------SIY---RG-DLSEEEEVLQWLITQKTE 160 (285)
Q Consensus 120 ~~~i~~~Ptl~~~~~g~~-------------~~y---~g-~~~~~~~l~~fi~~~~~~ 160 (285)
+|||+++||+++|++|.. ..| .| .++.+ .|.+||.+.++.
T Consensus 98 ~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae-~la~fi~~~t~~ 154 (178)
T 3ga4_A 98 DLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTL-QFGDFLAKILNI 154 (178)
T ss_dssp HTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHH-HHHHHHHHHHTC
T ss_pred HcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHH-HHHHHHHHhcCC
Confidence 999999999999998642 234 34 67775 899999988763
No 58
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.74 E-value=2.1e-17 Score=127.61 Aligned_cols=118 Identities=16% Similarity=0.322 Sum_probs=88.6
Q ss_pred cceeecC-hhHHHHHHhc--CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 56 NEIEEVN-RRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 56 ~~v~~l~-~~~f~~~~~~--~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
+.+..++ .++|+.++.+ +++++|.||++||++|+.+.|.|+++++.+. ++.++.+| ++.++++|+|.++||+
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 89 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGVPEVSEKYEISSVPTF 89 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCCHHHHHHcCCCCCCEE
Confidence 3466675 7999999887 8999999999999999999999999999874 47777776 6889999999999999
Q ss_pred EEEccccce-eecCCCchhHHHHHHHhhhcc------ccccccccHHHHHHHHHh
Q psy159 130 VYFRHRFPS-IYRGDLSEEEEVLQWLITQKT------EDRIELITRVMLETMVEE 177 (285)
Q Consensus 130 ~~~~~g~~~-~y~g~~~~~~~l~~fi~~~~~------~~~v~~~~~~~~~~~~~~ 177 (285)
++|++|+.+ .+.|. ..+ +|.+++.+.+. +..+..++.++|+.+...
T Consensus 90 ~~~~~G~~~~~~~G~-~~~-~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~~~~ 142 (153)
T 2wz9_A 90 LFFKNSQKIDRLDGA-HAP-ELTKKVQRHASSGSFLPSAKVKVDTDPNSSSVDKL 142 (153)
T ss_dssp EEEETTEEEEEEESS-CHH-HHHHHHHHHSCTTSSCSCCCCCCC-----------
T ss_pred EEEECCEEEEEEeCC-CHH-HHHHHHHHHhccccCCCccccccCCCCChhhHHHH
Confidence 999998874 46664 554 79999998764 335677888888776544
No 59
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.74 E-value=3.2e-17 Score=119.39 Aligned_cols=99 Identities=14% Similarity=0.219 Sum_probs=84.1
Q ss_pred ceeec-ChhHHHHHHhc----CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCe
Q psy159 57 EIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 128 (285)
Q Consensus 57 ~v~~l-~~~~f~~~~~~----~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Pt 128 (285)
.+..+ +.++|++.+.+ +++++|.||++||++|+.+.|.++++++.+.+ ++.++.+| ++.++++|+|.++||
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt 81 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITAMPT 81 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCBSSE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCcccE
Confidence 36667 67999999875 88999999999999999999999999999864 47787776 678999999999999
Q ss_pred EEEEccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 129 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 129 l~~~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++++++|+. ..+.|. +.+ ++.+++.+.+
T Consensus 82 ~~~~~~G~~~~~~~G~-~~~-~l~~~l~~~l 110 (112)
T 1ep7_A 82 FHVYKDGVKADDLVGA-SQD-KLKALVAKHA 110 (112)
T ss_dssp EEEEETTEEEEEEESC-CHH-HHHHHHHHHH
T ss_pred EEEEECCeEEEEEcCC-CHH-HHHHHHHHHh
Confidence 999998887 467887 554 8999987654
No 60
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.74 E-value=2e-17 Score=120.58 Aligned_cols=99 Identities=14% Similarity=0.268 Sum_probs=81.1
Q ss_pred eeecCh-hHHHHHHhc---CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEE
Q psy159 58 IEEVNR-RMLDKLLEE---NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 58 v~~l~~-~~f~~~~~~---~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
|.++++ ++|++.+.+ +++++|.||++||++|+.+.|.++++++.++..++.++.+| ++.++++|+|.++||++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 567776 999999876 78999999999999999999999999998643458888776 78899999999999999
Q ss_pred EEccccce-eecCCCchhHHHHHHHhhhc
Q psy159 131 YFRHRFPS-IYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 131 ~~~~g~~~-~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|++|+.+ .+.|.. .. ++.+++.+..
T Consensus 82 ~~~~G~~~~~~~G~~-~~-~l~~~l~~~~ 108 (112)
T 3d6i_A 82 IIHKGTILKELSGAD-PK-EYVSLLEDCK 108 (112)
T ss_dssp EEETTEEEEEECSCC-HH-HHHHHHHHHH
T ss_pred EEECCEEEEEecCCC-HH-HHHHHHHHHH
Confidence 99988874 577764 43 6888887654
No 61
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.74 E-value=3.2e-17 Score=119.84 Aligned_cols=102 Identities=15% Similarity=0.247 Sum_probs=87.5
Q ss_pred ccceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEE
Q psy159 55 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
++.|..++.++|++.+ .++++++|.||++||++|+.+.|.++++++.+++. +.++.+| ++.++++|+|.++|+++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~ 84 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPNPTTVKKYKVEGVPALR 84 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTCHHHHHHTTCCSSSEEE
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCCHHHHHHcCCCceeEEE
Confidence 3458899999999875 67789999999999999999999999999998643 7777766 78899999999999999
Q ss_pred EEccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 131 YFRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 131 ~~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|++|+. ..+.|..+.+ ++.+|+.+..
T Consensus 85 ~~~~G~~~~~~~g~~~~~-~l~~~l~~~l 112 (115)
T 1thx_A 85 LVKGEQILDSTEGVISKD-KLLSFLDTHL 112 (115)
T ss_dssp EEETTEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred EEcCCEEEEEecCCCCHH-HHHHHHHHHh
Confidence 9988887 4588988775 8999988654
No 62
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.74 E-value=3.7e-17 Score=118.07 Aligned_cols=99 Identities=18% Similarity=0.297 Sum_probs=84.8
Q ss_pred eeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEc
Q psy159 58 IEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 58 v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 133 (285)
|..+|+++|++.+ .++++++|.||++||++|+.+.|.++++++.+++. +.++.+| ++.++++|+|.++||+++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 7789999999875 56789999999999999999999999999988543 7777766 77899999999999999998
Q ss_pred cccc-eeecCCCchhHHHHHHHhhhc
Q psy159 134 HRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 134 ~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|+. ..+.|..+.+ ++.+++.+.+
T Consensus 82 ~G~~~~~~~G~~~~~-~l~~~l~~~l 106 (107)
T 1dby_A 82 GGKKCETIIGAVPKA-TIVQTVEKYL 106 (107)
T ss_dssp SSSEEEEEESCCCHH-HHHHHHHHHC
T ss_pred CCEEEEEEeCCCCHH-HHHHHHHHHh
Confidence 8877 4588888775 8888887653
No 63
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.74 E-value=1.7e-17 Score=125.95 Aligned_cols=79 Identities=14% Similarity=0.186 Sum_probs=71.4
Q ss_pred ccccHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 164 ELITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 164 ~~~~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
..-+.++|++.+. ++++++|.|||+||++|+.+.|.++++|+++.+ .+.|+++ ++++++.+|+|.+.||+++|+
T Consensus 25 ~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk 103 (160)
T 2av4_A 25 HLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEVPDFNTMYELYDPVSVMFFY 103 (160)
T ss_dssp ECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTTTTCCSSEEEEEEE
T ss_pred ccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCCHHHHHHcCCCCCCEEEEEE
Confidence 3456788988764 578999999999999999999999999999986 6899999 789999999999999999999
Q ss_pred CCeEE
Q psy159 239 NGNPL 243 (285)
Q Consensus 239 ~g~~~ 243 (285)
+|+.+
T Consensus 104 ~G~~v 108 (160)
T 2av4_A 104 RNKHM 108 (160)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 99987
No 64
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.74 E-value=1.7e-17 Score=122.87 Aligned_cols=102 Identities=11% Similarity=0.155 Sum_probs=85.2
Q ss_pred cceeecChhHHHH-HHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 56 NEIEEVNRRMLDK-LLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 56 ~~v~~l~~~~f~~-~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+.+..+|.++|+. ++.++++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+| ++.++++|+|.++||+++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 81 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKL 81 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEEE
Confidence 4588999999965 567788999999999999999999999999999864 48888776 788999999999999999
Q ss_pred Eccccc-eeecCC----CchhHHHHHHHhhhcc
Q psy159 132 FRHRFP-SIYRGD----LSEEEEVLQWLITQKT 159 (285)
Q Consensus 132 ~~~g~~-~~y~g~----~~~~~~l~~fi~~~~~ 159 (285)
|++|.. ..+.|. ++.+ +|.+|+.+.+.
T Consensus 82 ~~~~~~~~~~~g~~~~~~~~~-~l~~~l~~~l~ 113 (122)
T 3aps_A 82 YQYERAKKSIWEEQINSRDAK-TIAALIYGKLE 113 (122)
T ss_dssp EEEEGGGTEEEEEEECCSCHH-HHHHHHHHHHH
T ss_pred EeCCCccceeeccccCcCCHH-HHHHHHHHHHH
Confidence 977554 456664 5664 89999887653
No 65
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.73 E-value=2.5e-17 Score=121.37 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=83.1
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-------ChhHHhhhCCCCCCeEE
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-------DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-------~~~l~~~~~i~~~Ptl~ 130 (285)
+..++.++|+..+.++++++|.||++||++|+++.|.++++++.++. .+.++.++ .+.++++|+|.++||++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~ 92 (118)
T 1zma_A 14 LEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYFINSEEPSQLNDLQAFRSRYGIPTVPGFV 92 (118)
T ss_dssp SEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEEEETTCGGGHHHHHHHHHHHTCCSSCEEE
T ss_pred hhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEEEECCCcCcHHHHHHHHHHcCCCCCCeEE
Confidence 77889999999998889999999999999999999999999988753 37777655 24788999999999999
Q ss_pred EEccccc-eeecCCCchhHHHHHHHh
Q psy159 131 YFRHRFP-SIYRGDLSEEEEVLQWLI 155 (285)
Q Consensus 131 ~~~~g~~-~~y~g~~~~~~~l~~fi~ 155 (285)
+|++|+. ..+.|..+.+ +|.+|+.
T Consensus 93 ~~~~G~~~~~~~G~~~~~-~l~~~l~ 117 (118)
T 1zma_A 93 HITDGQINVRCDSSMSAQ-EIKDFAG 117 (118)
T ss_dssp EEETTEEEEECCTTCCHH-HHHHHHT
T ss_pred EEECCEEEEEecCCCCHH-HHHHHhh
Confidence 9998876 4688888775 8998885
No 66
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.73 E-value=3.1e-17 Score=119.58 Aligned_cols=101 Identities=19% Similarity=0.264 Sum_probs=85.9
Q ss_pred cceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 56 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+.|..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+++. +.++.+| ++.++++|+|.++||+++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 83 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDENPGTAAKYGVMSIPTLNV 83 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCCCHHHHHhCCCCcccEEEE
Confidence 457889999998765 56789999999999999999999999999998543 7777766 788999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+++|+. ..+.|..+.+ ++.+++.+.+
T Consensus 84 ~~~G~~~~~~~G~~~~~-~l~~~l~~~l 110 (112)
T 1t00_A 84 YQGGEVAKTIVGAKPKA-AIVRDLEDFI 110 (112)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHTHHHH
T ss_pred EeCCEEEEEEeCCCCHH-HHHHHHHHHh
Confidence 998887 4688988775 8999887654
No 67
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.73 E-value=3.9e-17 Score=120.62 Aligned_cols=102 Identities=15% Similarity=0.158 Sum_probs=87.2
Q ss_pred ccceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEE
Q psy159 55 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
++.+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++ ++.++.+| +..++++|+|.++|+++
T Consensus 12 ~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 90 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHTDLAIEYEVSAVPTVL 90 (119)
T ss_dssp CSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcccEEE
Confidence 4568999999998865 6678999999999999999999999999998854 37777766 67899999999999999
Q ss_pred EEccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 131 YFRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 131 ~~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|++|+. ..+.|..+.+ ++.+|+.+.+
T Consensus 91 ~~~~G~~~~~~~G~~~~~-~l~~~l~~~l 118 (119)
T 1w4v_A 91 AMKNGDVVDKFVGIKDED-QLEAFLKKLI 118 (119)
T ss_dssp EEETTEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCCCHH-HHHHHHHHHh
Confidence 9988876 4688887775 8999987643
No 68
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.73 E-value=1.5e-17 Score=124.54 Aligned_cols=102 Identities=19% Similarity=0.314 Sum_probs=86.7
Q ss_pred ccceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEE
Q psy159 55 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
++.|..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+++ ++.++.+| ++.++++|+|.++||++
T Consensus 21 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 99 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLL 99 (128)
T ss_dssp CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTCCTTSGGGTCCSSSEEE
T ss_pred ccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 3458889999999764 6778999999999999999999999999999854 37777766 67899999999999999
Q ss_pred EEccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 131 YFRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 131 ~~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|++|+. ..+.|..+.+ ++.+|+.+.+
T Consensus 100 ~~~~G~~~~~~~G~~~~~-~l~~~l~~~l 127 (128)
T 2o8v_B 100 LFKNGEVAATKVGALSKG-QLKEFLDANL 127 (128)
T ss_dssp EEETTEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred EEeCCEEEEEEcCCCCHH-HHHHHHHHhh
Confidence 9988886 4688988775 8999987643
No 69
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.73 E-value=5.5e-17 Score=118.41 Aligned_cols=100 Identities=14% Similarity=0.206 Sum_probs=85.6
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+.....++.++|+++++++++++|.||++||++|+++.|.++++++.+.+ +.++.+| ++.++++|+|.++||+++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 85 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEVSEVTEKENITSMPTFKV 85 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 34578899999999999999999999999999999999999999998863 7777665 678999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+++|+. ..+.|. +.+ ++.+++.+.+
T Consensus 86 ~~~G~~~~~~~G~-~~~-~l~~~l~~~l 111 (112)
T 1syr_A 86 YKNGSSVDTLLGA-NDS-ALKQLIEKYA 111 (112)
T ss_dssp EETTEEEEEEESC-CHH-HHHHHHHTTC
T ss_pred EECCcEEEEEeCC-CHH-HHHHHHHHhh
Confidence 998887 457887 654 8999987643
No 70
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.73 E-value=4.6e-18 Score=122.70 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=70.6
Q ss_pred ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccc-
Q psy159 62 NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFP- 137 (285)
Q Consensus 62 ~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~- 137 (285)
|.++|++.+.++++++|.|||+||++|+.+.|.++++++.+. ++.++.+| ++.++++|+|.++||+++|++|+.
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI 84 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CCCCEEEEEETTEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE
Confidence 567788888888999999999999999999999999999884 47777665 788999999999999999999987
Q ss_pred eeecCCCchhHHHHHHHhhhc
Q psy159 138 SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 138 ~~y~g~~~~~~~l~~fi~~~~ 158 (285)
..+.|..+.+ ++.+++.+..
T Consensus 85 ~~~~g~~~~~-~l~~~l~~~~ 104 (105)
T 4euy_A 85 LRESRFISLE-NLERTIQLFE 104 (105)
T ss_dssp EEEESSCCHH-HHHHHHHTTC
T ss_pred EEEeCCcCHH-HHHHHHHHhh
Confidence 4678888775 8999987653
No 71
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.73 E-value=3.3e-17 Score=133.26 Aligned_cols=107 Identities=21% Similarity=0.329 Sum_probs=93.8
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
...+..++.++|+..+.++++++|.||++||++|+.+.|.|+++++.+++ ++.++.+| ++.+|++|+|.++||+++
T Consensus 96 ~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 174 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRMLCRMKGVNSYPSLFI 174 (210)
T ss_dssp CTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHHHHHHcCCCcCCeEEE
Confidence 44588999999999998899999999999999999999999999999854 37888776 788999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhhcccccc
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQKTEDRI 163 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~~~~~~v 163 (285)
|++|+. ..+.|..+.+ +|.+|+.+.+.+.+.
T Consensus 175 ~~~G~~~~~~~G~~~~~-~l~~~i~~~l~~~~~ 206 (210)
T 3apq_A 175 FRSGMAAVKYNGDRSKE-SLVAFAMQHVRSTVT 206 (210)
T ss_dssp ECTTSCCEECCSCCCHH-HHHHHHHHHHHCCSS
T ss_pred EECCCceeEecCCCCHH-HHHHHHHHhCcccce
Confidence 988886 6789988875 899999988765544
No 72
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.73 E-value=4.1e-17 Score=119.62 Aligned_cols=100 Identities=19% Similarity=0.215 Sum_probs=83.5
Q ss_pred ccccceeec-ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCe
Q psy159 53 EIKNEIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 128 (285)
Q Consensus 53 ~~~~~v~~l-~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Pt 128 (285)
..++.+.++ +.++|++++.++++++|.||++||++|+++.|.++++++.+.+ +.++.+| ++.++++|+|.++||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~~Pt 86 (114)
T 2oe3_A 9 SSYTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTAMPT 86 (114)
T ss_dssp CCGGGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSBSE
T ss_pred cchhheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCcccE
Confidence 334456666 4677888899999999999999999999999999999998865 6777665 678999999999999
Q ss_pred EEEEccccc-eeecCCCchhHHHHHHHhh
Q psy159 129 VVYFRHRFP-SIYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 129 l~~~~~g~~-~~y~g~~~~~~~l~~fi~~ 156 (285)
++++++|+. ..+.|.. .+ +|.+++.+
T Consensus 87 ~~~~~~G~~~~~~~G~~-~~-~l~~~l~~ 113 (114)
T 2oe3_A 87 FVLGKDGQLIGKIIGAN-PT-ALEKGIKD 113 (114)
T ss_dssp EEEEETTEEEEEEESSC-HH-HHHHHHHT
T ss_pred EEEEeCCeEEEEEeCCC-HH-HHHHHHHh
Confidence 999998887 4588877 54 88888864
No 73
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.73 E-value=4.4e-17 Score=121.49 Aligned_cols=99 Identities=17% Similarity=0.179 Sum_probs=84.8
Q ss_pred cceeecCh-hHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 56 NEIEEVNR-RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 56 ~~v~~l~~-~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
..+.++++ ++|++.+.++++++|.||++||++|+.+.|.++++++.+. ++.++.+| +++++++|+|.++||+++
T Consensus 19 ~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 19 PSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp SCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 34788887 9999999888999999999999999999999999999884 37777766 788999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
|++|+. ..+.| .+.+ +|.+++.+.+
T Consensus 97 ~~~G~~~~~~~G-~~~~-~l~~~l~~~l 122 (125)
T 1r26_A 97 ARSGKMLGHVIG-ANPG-MLRQKLRDII 122 (125)
T ss_dssp EETTEEEEEEES-SCHH-HHHHHHHHHH
T ss_pred EeCCeEEEEEeC-CCHH-HHHHHHHHHh
Confidence 998887 45778 5554 8999887654
No 74
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.72 E-value=2.4e-17 Score=123.17 Aligned_cols=100 Identities=12% Similarity=0.219 Sum_probs=83.1
Q ss_pred ccccccccHHHHHHHHH-hCCeEEEEEECCCChhhHHHHHHHHHHHhhcC----cCCeEEEEE---cChHHHHhcCCccc
Q psy159 160 EDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECD----IYGIHMVKI---QDPQLAKRYSIKTF 231 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~-~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~----~~~i~~~~i---~~~~~~~~~~v~~~ 231 (285)
++.+..++.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. ..++.|+.+ .++.++++|+|.++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 45677899999999885 58999999999999999999999999998763 125899999 68899999999999
Q ss_pred CeEEEEeCCeE---EEEecCCccchhHHHHHhh
Q psy159 232 PALVYFRNGNP---LIFEGENKILKGTYIGTYI 261 (285)
Q Consensus 232 Ptl~~~~~g~~---~~y~g~~~~e~~~~~~~~~ 261 (285)
||+++|++|+. ..|.|.++. +.+..|+.
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~--~~l~~~i~ 124 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYL--SLVDSFVF 124 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCH--HHHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccH--HHHHHHHH
Confidence 99999998764 689998863 33455543
No 75
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.72 E-value=6.7e-17 Score=117.66 Aligned_cols=99 Identities=15% Similarity=0.250 Sum_probs=83.4
Q ss_pred ccceeecChhHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC----ChhHHhhhCCCCCCe
Q psy159 55 KNEIEEVNRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----DPRYARKWGVTKLPA 128 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~----~~~l~~~~~i~~~Pt 128 (285)
.+.|..++.++|++.+. ++++++|.||++||++|+.+.|.++++++.+.+ +.++.+| +..++++|+|.++||
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcchHHHHHHcCCCeeeE
Confidence 34588999999999986 478999999999999999999999999998864 6666654 578999999999999
Q ss_pred EEEEccccc-eeecCCCchhHHHHHHHhhh
Q psy159 129 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 129 l~~~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
++++++|+. ..+.|.. . +++.+++.+.
T Consensus 82 ~~~~~~G~~~~~~~G~~-~-~~l~~~l~~~ 109 (111)
T 2pu9_C 82 FKILKENSVVGEVTGAK-Y-DKLLEAIQAA 109 (111)
T ss_dssp EEEESSSSEEEEEESSC-H-HHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCC-H-HHHHHHHHHh
Confidence 999999987 4577774 4 3798888764
No 76
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.72 E-value=5.2e-17 Score=118.24 Aligned_cols=99 Identities=13% Similarity=0.244 Sum_probs=82.5
Q ss_pred ceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEc
Q psy159 57 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 57 ~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 133 (285)
.+..++.++| +.+.++++++|.||++||++|+.+.|.++++++.+. ++.++.+| +++++++|+|.++||+++|+
T Consensus 4 ~~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 80 (110)
T 2l6c_A 4 IRDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFERVPTLVFIR 80 (110)
T ss_dssp CSBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEE
T ss_pred eeecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcccCEEEEEE
Confidence 3566788999 666778899999999999999999999999998875 35666555 78899999999999999998
Q ss_pred cccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 134 HRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 134 ~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+|+. ..+.|..+.+ +|.+++....+
T Consensus 81 ~G~~v~~~~G~~~~~-~l~~~~~~~~~ 106 (110)
T 2l6c_A 81 DGKVAKVFSGIMNPR-ELQALYASIHH 106 (110)
T ss_dssp SSSEEEEEESCCCHH-HHHHHHHTC--
T ss_pred CCEEEEEEcCCCCHH-HHHHHHHHHhh
Confidence 8887 4688887775 89999887654
No 77
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.72 E-value=1.2e-16 Score=116.03 Aligned_cols=89 Identities=21% Similarity=0.482 Sum_probs=80.4
Q ss_pred cccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 161 DRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
..+..++.++|++.+ .++++++|.||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 82 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKTLFQRFSLKGVPQILY 82 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSCEEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChhHHHhcCCCcCCEEEE
Confidence 346678999999988 6789999999999999999999999999999986 6899988 7888999999999999999
Q ss_pred EeCCeEE-EEecCCc
Q psy159 237 FRNGNPL-IFEGENK 250 (285)
Q Consensus 237 ~~~g~~~-~y~g~~~ 250 (285)
|++|+.+ .+.|..+
T Consensus 83 ~~~g~~~~~~~g~~~ 97 (111)
T 3gnj_A 83 FKDGEYKGKMAGDVE 97 (111)
T ss_dssp EETTEEEEEEESSCC
T ss_pred EECCEEEEEEeccCC
Confidence 9999877 7888875
No 78
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.72 E-value=9.6e-17 Score=118.82 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=84.9
Q ss_pred cceeecChhHHHHHHhc----CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCe
Q psy159 56 NEIEEVNRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 128 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~~----~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Pt 128 (285)
..+..++.++|+..+.. +++++|.||++||++|+.+.|.|+++++.+.+ +.++.+| +++++++|+|.++||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt 90 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELKPIAEQFSVEAMPT 90 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCHHHHHHcCCCcccE
Confidence 34778899999998754 78999999999999999999999999998865 6777665 788999999999999
Q ss_pred EEEEccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 129 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 129 l~~~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++++++|+. ..+.|.. .+ ++.+++.+.+
T Consensus 91 ~~~~~~G~~~~~~~G~~-~~-~l~~~l~~~l 119 (122)
T 2vlu_A 91 FLFMKEGDVKDRVVGAI-KE-ELTAKVGLHA 119 (122)
T ss_dssp EEEEETTEEEEEEESSC-HH-HHHHHHHHHH
T ss_pred EEEEeCCEEEEEEeCcC-HH-HHHHHHHHHh
Confidence 999998887 4688888 54 8999988754
No 79
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.72 E-value=5.4e-17 Score=148.88 Aligned_cols=151 Identities=13% Similarity=0.247 Sum_probs=114.9
Q ss_pred HHHHHcCC-CCCCeEEEeecCcccccc----CC----------CcchHHHHHHhhcC----CC--------cc-ccccee
Q psy159 8 EAAAKYNI-INLPSLVYFRKQVPLLYD----GD----------LFDEEKILTWLTSQ----DV--------FE-IKNEIE 59 (285)
Q Consensus 8 ~~~~~~~i-~~~Ptl~~~~~~~~~~y~----g~----------~~~~~~i~~fi~~~----~~--------p~-~~~~v~ 59 (285)
.+++.+|+ ..+|++++++......|. |+ ..+.+.+..|+.+- .. |. ..+.|.
T Consensus 282 ~~~~~~gl~~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~ 361 (504)
T 2b5e_A 282 RHAGNLNMKEQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVF 361 (504)
T ss_dssp THHHHTTCCSCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEE
T ss_pred HHHHHcCCcccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccce
Confidence 46888898 459999999864333332 22 02344888887542 11 11 135688
Q ss_pred ecChhHHHHHHh-cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcC--CCCcEEEEeC--ChhHHhhhCCCCCCeEEEEcc
Q psy159 60 EVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETD--NMDITFVKMA--DPRYARKWGVTKLPAVVYFRH 134 (285)
Q Consensus 60 ~l~~~~f~~~~~-~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~--~~~v~~~~~~--~~~l~~~~~i~~~Ptl~~~~~ 134 (285)
.++.++|+..+. ++++++|.||||||++|+.+.|.|+++++.+. ..++.++.+| .....+ |+|.++||+++|++
T Consensus 362 ~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~-~~v~~~Pt~~~~~~ 440 (504)
T 2b5e_A 362 QLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG-VVIEGYPTIVLYPG 440 (504)
T ss_dssp EECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSS-CCCSSSSEEEEECC
T ss_pred ecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcccccc-CCceecCeEEEEeC
Confidence 999999999864 57899999999999999999999999999884 3458888887 223344 99999999999998
Q ss_pred cc---ceeecCCCchhHHHHHHHhhhccc
Q psy159 135 RF---PSIYRGDLSEEEEVLQWLITQKTE 160 (285)
Q Consensus 135 g~---~~~y~g~~~~~~~l~~fi~~~~~~ 160 (285)
|+ ...|.|.++.+ ++.+|+.+....
T Consensus 441 G~~~~~~~~~G~~~~~-~l~~~i~~~~~~ 468 (504)
T 2b5e_A 441 GKKSESVVYQGSRSLD-SLFDFIKENGHF 468 (504)
T ss_dssp TTSCCCCBCCSCCCHH-HHHHHHHHHCTT
T ss_pred CceecceEecCCCCHH-HHHHHHHhcCCC
Confidence 85 46799999886 999999988653
No 80
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.72 E-value=9.3e-17 Score=116.10 Aligned_cols=96 Identities=11% Similarity=0.209 Sum_probs=80.2
Q ss_pred eeec-ChhHHHHHH--hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 58 IEEV-NRRMLDKLL--EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 58 v~~l-~~~~f~~~~--~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+.++ +.++|++.+ .++++++|.||++||++|+.+.|.++++++.+. ++.++.+| +++++++|+|.++||+++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 80 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQCQGTAATNNISATPTFQF 80 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHhcCCCcccEEEE
Confidence 4445 679999998 467899999999999999999999999999984 47777766 788999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhh
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
|++|+. ..+.|.. .. +|.+++.+.
T Consensus 81 ~~~G~~~~~~~G~~-~~-~l~~~l~~~ 105 (107)
T 1gh2_A 81 FRNKVRIDQYQGAD-AV-GLEEKIKQH 105 (107)
T ss_dssp EETTEEEEEEESSC-HH-HHHHHHHHH
T ss_pred EECCeEEEEEeCCC-HH-HHHHHHHHh
Confidence 999986 4577854 44 588888764
No 81
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=4.3e-18 Score=128.98 Aligned_cols=102 Identities=15% Similarity=0.224 Sum_probs=86.2
Q ss_pred ccceeecChhHHHHHHhcCC--cEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCC-----
Q psy159 55 KNEIEEVNRRMLDKLLEENE--FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVT----- 124 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~--~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~----- 124 (285)
++.|..+|.++|+..+.+++ +++|.|||+||++|+.+.|.|+++++.+++.++.++.+| +++++++|+|.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 34588999999999886654 899999999999999999999999999976568999887 78899999999
Q ss_pred -CCCeEEEEccccc-eeecCCCchhHHHHHHHhhh
Q psy159 125 -KLPAVVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 125 -~~Ptl~~~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
++||+++|++|+. ..+.|..+.+ ++.+|+.+.
T Consensus 86 ~~~Pt~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~ 119 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAMRRPQIDKKG-RAVSWTFSE 119 (137)
T ss_dssp SCSSEEEEESSSSEEEEESCBCSSS-CBCCCCCCH
T ss_pred CCCCEEEEEECCEEEEEecCcCchH-HHHHHHhcc
Confidence 9999999999887 4578877765 666666543
No 82
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.71 E-value=5.5e-17 Score=133.09 Aligned_cols=106 Identities=19% Similarity=0.307 Sum_probs=91.6
Q ss_pred cccccceeecChhHHHHH-HhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCC
Q psy159 52 FEIKNEIEEVNRRMLDKL-LEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLP 127 (285)
Q Consensus 52 p~~~~~v~~l~~~~f~~~-~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~P 127 (285)
|..+..+..+|.++|+.. +.++++++|.||++||++|+.+.|.|+++++.+++. +.++.+| ++.++++|+|.++|
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~P 86 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRGIP 86 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCTTTGGGGTCCSBS
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCHHHHHHcCCCcCC
Confidence 445677999999999885 677889999999999999999999999999999653 7777666 77899999999999
Q ss_pred eEEEEccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 128 AVVYFRHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 128 tl~~~~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|+++|++|+. ..+.|..+.+ ++.+|+.+...
T Consensus 87 t~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~l~ 118 (222)
T 3dxb_A 87 TLLLFKNGEVAATKVGALSKG-QLKEFLDANLA 118 (222)
T ss_dssp EEEEEETTEEEEEEESCCCHH-HHHHHHHHHSC
T ss_pred EEEEEECCeEEEEeccccChH-HHHHHHHhhcc
Confidence 9999999887 4788988876 89999998764
No 83
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.71 E-value=1.9e-16 Score=130.25 Aligned_cols=149 Identities=15% Similarity=0.193 Sum_probs=121.6
Q ss_pred ccccchHHHHHcCCCCCCeEEEeecC--ccccccC----CCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhcCCc
Q psy159 2 VKISDTEAAAKYNIINLPSLVYFRKQ--VPLLYDG----DLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEENEF 75 (285)
Q Consensus 2 ~~~~~~~~~~~~~i~~~Ptl~~~~~~--~~~~y~g----~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~~~~ 75 (285)
..+.++++|++|+|++ |+|++|+++ .+..|+| .++.+ +|.+|++.+..|. |.++|.+++..++.++.+
T Consensus 59 ~~t~~~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~~g~~~~~-~l~~fi~~~~~pl----v~e~t~~n~~~~~~~~~~ 132 (227)
T 4f9z_D 59 GISTDSEVLTHYNITG-NTICLFRLVDNEQLNLEDEDIESIDAT-KLSRFIEINSLHM----VTEYNPVTVIGLFNSVIQ 132 (227)
T ss_dssp EEECCHHHHHHTTCCS-SEEEEEETTTTEEEEECHHHHHTCCHH-HHHHHHHHHCCCS----EEECCHHHHHHHHHSSCC
T ss_pred EEECCHHHHHHcCCCC-CeEEEEEecCcccccccccccCCCCHH-HHHHHHHHhCCCc----eeecCcccHHHHhccCCc
Confidence 4577899999999998 999999975 4567885 66555 9999999999998 999999999999887755
Q ss_pred E-EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-----ChhHHhhhCCC--CCCeEEEEccccc--eeec-CCC
Q psy159 76 V-TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-----DPRYARKWGVT--KLPAVVYFRHRFP--SIYR-GDL 144 (285)
Q Consensus 76 ~-lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-----~~~l~~~~~i~--~~Ptl~~~~~g~~--~~y~-g~~ 144 (285)
. +++|+.+||++|.++.+.|+++|+.+++. +.|+.+| ...+++.||+. .+|++.++..+.. +.+. +..
T Consensus 133 ~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~ 211 (227)
T 4f9z_D 133 IHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEV 211 (227)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCC
T ss_pred eEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCC
Confidence 4 45677899999999999999999999664 7787776 24678999998 7999999985433 4443 667
Q ss_pred chhHHHHHHHhhhc
Q psy159 145 SEEEEVLQWLITQK 158 (285)
Q Consensus 145 ~~~~~l~~fi~~~~ 158 (285)
+.+ +|.+|+.+..
T Consensus 212 t~~-~i~~Fv~~~~ 224 (227)
T 4f9z_D 212 SVE-HVQNFCDGFL 224 (227)
T ss_dssp CHH-HHHHHHHHHH
T ss_pred CHH-HHHHHHHHHh
Confidence 765 8999998754
No 84
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.71 E-value=8.7e-17 Score=118.23 Aligned_cols=95 Identities=22% Similarity=0.296 Sum_probs=81.2
Q ss_pred eeecCh-hHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 58 IEEVNR-RMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 58 v~~l~~-~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
+.++++ ++|+..+. ++++++|.||++||++|+.+.|.++++++.+ ++.++.+| ++.++++|+|.++||+++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 777876 99999987 6789999999999999999999999999887 57777776 678999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhh
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
+++|+. ..+.| .+.+ ++.+++.+.
T Consensus 92 ~~~G~~~~~~~G-~~~~-~l~~~l~~~ 116 (117)
T 2xc2_A 92 IKNGEKVGDVVG-ASIA-KVEDMIKKF 116 (117)
T ss_dssp EETTEEEEEEES-SCHH-HHHHHHHHH
T ss_pred EeCCcEEEEEeC-CCHH-HHHHHHHHh
Confidence 998887 45777 4554 788888754
No 85
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.71 E-value=7.6e-17 Score=115.86 Aligned_cols=98 Identities=15% Similarity=0.275 Sum_probs=83.7
Q ss_pred eeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEc
Q psy159 58 IEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 58 v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 133 (285)
|..+|.++|+..+ .++++++|.||++||++|+.+.|.++++++.+++. +.++.+| ++.++++|+|.++||+++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDEAPGIATQYNIRSIPTVLFFK 80 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcchHHHHHhCCCCcccEEEEEe
Confidence 6778999999875 56789999999999999999999999999988543 7777765 67899999999999999999
Q ss_pred cccc-eeecCCCchhHHHHHHHhhh
Q psy159 134 HRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 134 ~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
+|+. ..+.|..+.+ .+.+++.+.
T Consensus 81 ~g~~~~~~~G~~~~~-~l~~~l~~~ 104 (105)
T 1fb6_A 81 NGERKESIIGAVPKS-TLTDSIEKY 104 (105)
T ss_dssp TTEEEEEEEECCCHH-HHHHHHHHH
T ss_pred CCeEEEEEecCCCHH-HHHHHHHhh
Confidence 8887 4588888775 898888754
No 86
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.71 E-value=1.3e-16 Score=114.71 Aligned_cols=95 Identities=14% Similarity=0.241 Sum_probs=81.2
Q ss_pred eec-ChhHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEE
Q psy159 59 EEV-NRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 59 ~~l-~~~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~ 132 (285)
.++ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+.+ +.++.+| ++.++++|+|.++||+++|
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASESEVKSMPTFQFF 80 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTCHHHHHHTTCCBSSEEEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhhHHHHHHcCCCcCcEEEEE
Confidence 344 6889999987 678999999999999999999999999998865 7777666 7899999999999999999
Q ss_pred ccccce-eecCCCchhHHHHHHHhhh
Q psy159 133 RHRFPS-IYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 133 ~~g~~~-~y~g~~~~~~~l~~fi~~~ 157 (285)
++|+.+ .+.|. +.+ ++.+++.+.
T Consensus 81 ~~g~~~~~~~g~-~~~-~l~~~l~~~ 104 (105)
T 3m9j_A 81 KKGQKVGEFSGA-NKE-KLEATINEL 104 (105)
T ss_dssp ETTEEEEEEESS-CHH-HHHHHHHHH
T ss_pred ECCeEEEEEeCC-CHH-HHHHHHHHh
Confidence 988874 57887 654 899998764
No 87
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.71 E-value=1.3e-16 Score=114.87 Aligned_cols=97 Identities=13% Similarity=0.282 Sum_probs=81.7
Q ss_pred eeecCh-hHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 58 IEEVNR-RMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 58 v~~l~~-~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
|.++++ ++|+..+. ++++++|.||++||++|+.+.|.++++++.++. ++.++.+| ++.++++|++.++||+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDECEDIAMEYNISSMPTFVF 80 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccchHHHHHHcCCCcccEEEE
Confidence 566776 99999887 678999999999999999999999999998853 47777766 678999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhh
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
+++|+. ..+.| .+.+ ++.+++.+.
T Consensus 81 ~~~G~~~~~~~g-~~~~-~l~~~i~~~ 105 (106)
T 1xwb_A 81 LKNGVKVEEFAG-ANAK-RLEDVIKAN 105 (106)
T ss_dssp EETTEEEEEEES-CCHH-HHHHHHHHT
T ss_pred EcCCcEEEEEcC-CCHH-HHHHHHHHh
Confidence 998886 45778 5554 788888754
No 88
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=5e-17 Score=121.17 Aligned_cols=114 Identities=19% Similarity=0.330 Sum_probs=89.0
Q ss_pred ccccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 160 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
++.+..++.++|++.++. .++|+||++||++|+.+.|.++++++++.+.++.|+.+ .+..++++|+|.++||+++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYH 83 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEE
Confidence 345667888999887644 48999999999999999999999999987546888888 6788999999999999999
Q ss_pred EeCCeEEEEecCCccchhHHHHHhhhcCCCCCCCCCCCCC-CC
Q psy159 237 FRNGNPLIFEGENKILKGTYIGTYISTKAFSLIPFCFSEK-HP 278 (285)
Q Consensus 237 ~~~g~~~~y~g~~~~e~~~~~~~~~~~~~~~~~~e~~~~~-~~ 278 (285)
+++|+...|.|.++.+ . +..+++....+.+..++.-. ||
T Consensus 84 ~~~G~~~~~~G~~~~~--~-l~~~l~~~~~~~~~~~~~~~~~p 123 (126)
T 1x5e_A 84 CKDGEFRRYQGPRTKK--D-FINFISDKEWKSIEPVSSWFSGP 123 (126)
T ss_dssp EETTEEEECCSCCCHH--H-HHHHHHTCGGGGSCEECCCCCSS
T ss_pred EeCCeEEEeecCCCHH--H-HHHHHHHHhhccCCCchhhhcCC
Confidence 9999977888987532 2 44444444444555554444 66
No 89
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.71 E-value=1.5e-16 Score=114.10 Aligned_cols=95 Identities=18% Similarity=0.357 Sum_probs=79.9
Q ss_pred eecCh-hHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEE
Q psy159 59 EEVNR-RMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 59 ~~l~~-~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~ 132 (285)
.++++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+. ++.++.+| +++++++|+|.++||++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTAMPTFVFI 79 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCccccEEEEE
Confidence 45654 89999887 67899999999999999999999999999886 47777666 6789999999999999999
Q ss_pred ccccc-eeecCCCchhHHHHHHHhhh
Q psy159 133 RHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 133 ~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
++|+. ..+.| .+.+ ++.+++.+.
T Consensus 80 ~~g~~~~~~~G-~~~~-~l~~~l~~~ 103 (104)
T 2vim_A 80 KDGKEVDRFSG-ANET-KLRETITRH 103 (104)
T ss_dssp ETTEEEEEEES-SCHH-HHHHHHHHH
T ss_pred eCCcEEEEEeC-CCHH-HHHHHHHhh
Confidence 99887 45777 5554 799988764
No 90
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.71 E-value=1.5e-16 Score=115.01 Aligned_cols=89 Identities=17% Similarity=0.313 Sum_probs=81.0
Q ss_pred cccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEE
Q psy159 161 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~ 237 (285)
+.+..++.++|++.+.++++++|+||++||++|+.+.|.++++++.+.+ ++.|+.+ .++.++++|+|.++|+++++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCcccCCEEEEE
Confidence 4566889999999999999999999999999999999999999999986 6888888 78899999999999999999
Q ss_pred eCCeEE-EEecCCc
Q psy159 238 RNGNPL-IFEGENK 250 (285)
Q Consensus 238 ~~g~~~-~y~g~~~ 250 (285)
++|+.+ .+.|..+
T Consensus 83 ~~g~~~~~~~g~~~ 96 (109)
T 3tco_A 83 VNGQLVDSLVGAVD 96 (109)
T ss_dssp ETTEEEEEEESCCC
T ss_pred cCCcEEEeeeccCC
Confidence 999876 7888875
No 91
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.70 E-value=8.9e-17 Score=121.42 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=84.9
Q ss_pred ccceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe---------C-ChhHHhhhCCC
Q psy159 55 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM---------A-DPRYARKWGVT 124 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~---------~-~~~l~~~~~i~ 124 (285)
++.+..++.++|++.+.+ +++|.|||+||++|+.+.|.++++++.++ ..+..+.+ + +++++++|+|.
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 455888999999999877 99999999999999999999999999886 33444555 3 56789999999
Q ss_pred CCCeEEEEccccc-eeecCCCchhHHHHHHHhhhccc
Q psy159 125 KLPAVVYFRHRFP-SIYRGDLSEEEEVLQWLITQKTE 160 (285)
Q Consensus 125 ~~Ptl~~~~~g~~-~~y~g~~~~~~~l~~fi~~~~~~ 160 (285)
++||+++|++|+. ..+.|....+ .+.+++++..++
T Consensus 92 ~~Pt~~~~~~G~~v~~~~G~~~~~-~~~~~i~~~~~~ 127 (135)
T 3emx_A 92 GTPTLVFYKEGRIVDKLVGATPWS-LKVEKAREIYGG 127 (135)
T ss_dssp SSSEEEEEETTEEEEEEESCCCHH-HHHHHHHHHC--
T ss_pred eeCeEEEEcCCEEEEEEeCCCCHH-HHHHHHHHHhCC
Confidence 9999999999987 5688888875 788888877653
No 92
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.70 E-value=1e-16 Score=118.33 Aligned_cols=101 Identities=24% Similarity=0.301 Sum_probs=86.6
Q ss_pred cceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEE
Q psy159 56 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~ 131 (285)
..+..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+++ ++.++.+| ++.++++|+|.++||+++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 90 (121)
T 2i1u_A 12 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPETARNFQVVSIPTLIL 90 (121)
T ss_dssp CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhcCCCcCCEEEE
Confidence 348889999998764 6678999999999999999999999999999854 37777766 788999999999999999
Q ss_pred Eccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 132 FRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 132 ~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
|++|+. ..+.|..+.+ ++.+++.+.+
T Consensus 91 ~~~g~~~~~~~G~~~~~-~l~~~l~~~l 117 (121)
T 2i1u_A 91 FKDGQPVKRIVGAKGKA-ALLRELSDVV 117 (121)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHTCSCC
T ss_pred EECCEEEEEecCCCCHH-HHHHHHHHHH
Confidence 998887 5688988775 8999987654
No 93
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.70 E-value=2.3e-17 Score=122.00 Aligned_cols=102 Identities=11% Similarity=0.257 Sum_probs=85.6
Q ss_pred ccceeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC----CCcEEEEeC--ChhHHhhhCCCCCC
Q psy159 55 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDN----MDITFVKMA--DPRYARKWGVTKLP 127 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~----~~v~~~~~~--~~~l~~~~~i~~~P 127 (285)
.+.|..++.++|+..+ .++++++|.||++||++|+++.|.|+++++.+++ .++.++.+| ...+++ +|.++|
T Consensus 6 ~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~--~v~~~P 83 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD--EIQGFP 83 (121)
T ss_dssp SCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS--CCSSSS
T ss_pred CCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc--ccCcCC
Confidence 3458899999999885 6778999999999999999999999999999954 258888777 334666 999999
Q ss_pred eEEEEccc-c--ceeecCCCchhHHHHHHHhhhcc
Q psy159 128 AVVYFRHR-F--PSIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 128 tl~~~~~g-~--~~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|+++|++| + ...|.|.++.+ +|.+|+.+...
T Consensus 84 t~~~~~~~~~~~~~~~~G~~~~~-~l~~~i~~~~~ 117 (121)
T 2djj_A 84 TIKLYPAGAKGQPVTYSGSRTVE-DLIKFIAENGK 117 (121)
T ss_dssp EEEEECSSCTTSCCCCCCCSCHH-HHHHHHHHTSS
T ss_pred eEEEEeCcCCCCceEecCCCCHH-HHHHHHHhccC
Confidence 99999986 4 46799988875 89999987654
No 94
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.70 E-value=1.7e-16 Score=117.82 Aligned_cols=99 Identities=14% Similarity=0.243 Sum_probs=83.3
Q ss_pred ccceeecChhHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC----ChhHHhhhCCCCCCe
Q psy159 55 KNEIEEVNRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----DPRYARKWGVTKLPA 128 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~----~~~l~~~~~i~~~Pt 128 (285)
.+.+..++.++|+..+. ++++++|.||++||++|+++.|.++++++.+.+ +.++.+| +++++++|+|.++||
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcchHHHHHHcCCCeeeE
Confidence 34588999999999886 578999999999999999999999999998864 6666654 578999999999999
Q ss_pred EEEEccccc-eeecCCCchhHHHHHHHhhh
Q psy159 129 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 129 l~~~~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
++++++|+. ..+.|.. . +++.+++.+.
T Consensus 95 ~~~~~~G~~~~~~~G~~-~-~~l~~~i~~~ 122 (124)
T 1faa_A 95 FKILKENSVVGEVTGAK-Y-DKLLEAIQAA 122 (124)
T ss_dssp EEEEETTEEEEEEESSC-H-HHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCC-H-HHHHHHHHHh
Confidence 999999987 4577775 4 3799888764
No 95
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=1.8e-17 Score=124.70 Aligned_cols=104 Identities=13% Similarity=0.194 Sum_probs=87.6
Q ss_pred ccceeecChhHHHHHHh-cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC-CCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 55 KNEIEEVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~-~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~-~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
.+.|..++.++|+..+. ++++++|.||++||++|+.+.|.|+++++.++. .++.++.+| +..++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEE
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEE
Confidence 34588999999998875 478999999999999999999999999999853 358888888 5678899999999999
Q ss_pred EEEccccc---eeec-CCCchhHHHHHHHhhhcc
Q psy159 130 VYFRHRFP---SIYR-GDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 130 ~~~~~g~~---~~y~-g~~~~~~~l~~fi~~~~~ 159 (285)
++|.+|.. +.|. |.++.+ +|.+|+.+.+.
T Consensus 86 ~~~~~g~~~~~~~~~gg~~~~~-~l~~~l~~~~~ 118 (133)
T 2dj3_A 86 YFAPSGDKKNPIKFEGGNRDLE-HLSKFIDEHAT 118 (133)
T ss_dssp EEECTTCTTSCEECCSSCCSTT-HHHHHHHHHSS
T ss_pred EEEeCCCcccceEecCCCcCHH-HHHHHHHHhcc
Confidence 99988753 4677 446665 89999998765
No 96
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.70 E-value=2.5e-16 Score=117.20 Aligned_cols=100 Identities=11% Similarity=0.204 Sum_probs=83.0
Q ss_pred ccceeec-ChhHHHHHHhc----CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCC
Q psy159 55 KNEIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKL 126 (285)
Q Consensus 55 ~~~v~~l-~~~~f~~~~~~----~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~ 126 (285)
...+.++ |.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. ++.++.+| ++.++++|+|.++
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHHcCCCcc
Confidence 4456777 78999988764 7899999999999999999999999999886 47777776 6789999999999
Q ss_pred CeEEEEccccce-eecCCCchhHHHHHHHhhhc
Q psy159 127 PAVVYFRHRFPS-IYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 127 Ptl~~~~~g~~~-~y~g~~~~~~~l~~fi~~~~ 158 (285)
||++++++|+.+ .+.| .+.+ ++.+++.+.+
T Consensus 93 Pt~~~~~~G~~~~~~~G-~~~~-~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG-AKKD-ELQSTIAKHL 123 (124)
T ss_dssp SEEEEEETTEEEEEEES-CCHH-HHHHHHHHHC
T ss_pred CEEEEEECCEEEEEEeC-CCHH-HHHHHHHHhc
Confidence 999999988874 5777 4554 7888887643
No 97
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.70 E-value=5.8e-17 Score=138.00 Aligned_cols=103 Identities=19% Similarity=0.367 Sum_probs=90.0
Q ss_pred ccceeecChhHHHHHHhc--CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 55 KNEIEEVNRRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~--~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
++.|.++|.++|+.++.. +++++|.||++||++|+.+.|.|+++++.+++ ++.++.+| ++.++++|+|.++||+
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 345899999999998864 78999999999999999999999999999965 37888776 7899999999999999
Q ss_pred EEEccccce-eecCCCchhHHHHHHHhhhcc
Q psy159 130 VYFRHRFPS-IYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 130 ~~~~~g~~~-~y~g~~~~~~~l~~fi~~~~~ 159 (285)
++|++|+.+ .+.|..+.+ .+.+++....+
T Consensus 85 ~~~~~G~~~~~~~g~~~~~-~l~~~l~~~lp 114 (287)
T 3qou_A 85 YLFQNGQPVDGFQGPQPEE-AIRALLDXVLP 114 (287)
T ss_dssp EEEETTEEEEEEESCCCHH-HHHHHHHHHSC
T ss_pred EEEECCEEEEEeeCCCCHH-HHHHHHHHHcC
Confidence 999999874 588988875 89999988763
No 98
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.70 E-value=1.5e-16 Score=122.34 Aligned_cols=95 Identities=11% Similarity=0.270 Sum_probs=80.3
Q ss_pred cChhHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccc
Q psy159 61 VNRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHR 135 (285)
Q Consensus 61 l~~~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g 135 (285)
.+.++|+..+. ++++++|.|||+||++|+.+.|.++++++.+++. +.++.+| +++++++|+|.++||++++++|
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 87 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISYIPSTVFFFNG 87 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCSSSEEEEEETT
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCccCeEEEEECC
Confidence 47889999874 4789999999999999999999999999998553 7777766 7899999999999999999999
Q ss_pred cce----------eecC-CCchhHHHHHHHhhh
Q psy159 136 FPS----------IYRG-DLSEEEEVLQWLITQ 157 (285)
Q Consensus 136 ~~~----------~y~g-~~~~~~~l~~fi~~~ 157 (285)
+.+ .+.| ..+.+ ++.+++...
T Consensus 88 ~~v~~~~g~~~~~~~~G~~~~~~-~l~~~l~~~ 119 (149)
T 3gix_A 88 QHMKVDYGSPDHTKFVGSFKTKQ-DFIDLIEVI 119 (149)
T ss_dssp EEEEEECSSSCCSCEESCCSSHH-HHHHHHHHH
T ss_pred eEEEeecCCCCCCeEeeecCCHH-HHHHHHHHH
Confidence 876 5778 56554 788888764
No 99
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.70 E-value=2.6e-16 Score=114.25 Aligned_cols=99 Identities=16% Similarity=0.387 Sum_probs=82.8
Q ss_pred cccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcC--CeEEEEE---cChHHHHhcCCcccCeEE
Q psy159 161 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIY--GIHMVKI---QDPQLAKRYSIKTFPALV 235 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~--~i~~~~i---~~~~~~~~~~v~~~Ptl~ 235 (285)
+.+..++.++|++.+. +++++|+||++||++|+.+.|.++++++++... ++.++.+ .++.++++|+|.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEE
Confidence 4566889999999888 789999999999999999999999999987632 5888888 678899999999999999
Q ss_pred EEeCCeEE-EEecCCccchhHHHHHhhh
Q psy159 236 YFRNGNPL-IFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 236 ~~~~g~~~-~y~g~~~~e~~~~~~~~~~ 262 (285)
++++|+.+ .+.|..+. +.+..|+.+
T Consensus 84 ~~~~g~~~~~~~g~~~~--~~l~~~l~~ 109 (111)
T 3uvt_A 84 LFRGGKKVSEHSGGRDL--DSLHRFVLS 109 (111)
T ss_dssp EEETTEEEEEECSCCSH--HHHHHHHHH
T ss_pred EEeCCcEEEeccCCcCH--HHHHHHHHh
Confidence 99999876 78888753 334555543
No 100
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.69 E-value=2e-17 Score=122.99 Aligned_cols=102 Identities=20% Similarity=0.318 Sum_probs=82.2
Q ss_pred ccceeecChhHHHHH-HhcCCcEEEEEeCCCCh--------------hHHHHHHHHHhHHhhcCCCCcEEEEeC---Chh
Q psy159 55 KNEIEEVNRRMLDKL-LEENEFVTVFFYETDHK--------------DSVKVLERLEKIDGETDNMDITFVKMA---DPR 116 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~-~~~~~~~lv~Fya~~c~--------------~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~ 116 (285)
++.|.+++.++|++. +.++++++|.||++||+ +|+.+.|.++++++.+++ ++.++.+| ++.
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 2 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPG 80 (123)
T ss_dssp CCSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTT
T ss_pred CCccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCCHH
Confidence 345888999999866 46788999999999999 999999999999988854 37777776 678
Q ss_pred HHhhhCCCCCCeEEEEccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 117 YARKWGVTKLPAVVYFRHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 117 l~~~~~i~~~Ptl~~~~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++++|+|.++||+++|++|+. ..+.|..+.+ ++.+++.+.+
T Consensus 81 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~l 122 (123)
T 1oaz_A 81 TAPKYGIRGIPTLLLFKNGEVAATKVGALSKG-QLKEFLDANL 122 (123)
T ss_dssp TGGGGTCCBSSEEEEEESSSEEEEEESCCCHH-HHHHHHTTTC
T ss_pred HHHHcCCCccCEEEEEECCEEEEEEeCCCCHH-HHHHHHHHHh
Confidence 999999999999999988887 4688988775 8999997653
No 101
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.69 E-value=1.6e-16 Score=131.06 Aligned_cols=98 Identities=16% Similarity=0.322 Sum_probs=88.3
Q ss_pred cceeecChhHHHHHHhcCCcEEEEEeC--CCChhHHHHHHHHHhHHhhcCC-CCcEEEEeC--------ChhHHhhhCCC
Q psy159 56 NEIEEVNRRMLDKLLEENEFVTVFFYE--TDHKDSVKVLERLEKIDGETDN-MDITFVKMA--------DPRYARKWGVT 124 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~~~~~~lv~Fya--~~c~~C~~~~~~~~~~a~~~~~-~~v~~~~~~--------~~~l~~~~~i~ 124 (285)
+.|..+|+++|+.++.++++++|.||| |||+ +.|.|+++|+.+.+ .++.|+.+| ++++|++|+|.
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 458899999999999888999999999 9999 99999999999953 458999988 68999999999
Q ss_pred --CCCeEEEEcccc---ceeecCCCchhHHHHHHHhhhc
Q psy159 125 --KLPAVVYFRHRF---PSIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 125 --~~Ptl~~~~~g~---~~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++||+++|++|. +..|.|.++.+ +|.+|+.+..
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~-~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVG-AIQRWLKGQG 118 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHH-HHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHH-HHHHHHHHhc
Confidence 999999999987 57899999886 9999999884
No 102
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.69 E-value=1.2e-16 Score=118.32 Aligned_cols=99 Identities=14% Similarity=0.266 Sum_probs=83.1
Q ss_pred eeec-ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEc
Q psy159 58 IEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 58 v~~l-~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 133 (285)
+..+ +.++|++.+.++++++|.||++||++|+.+.|.++++++.+.+.++.++.+| +++++++|+|.++||+++|+
T Consensus 17 ~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~ 96 (121)
T 2j23_A 17 VQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFK 96 (121)
T ss_dssp EEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEE
T ss_pred eEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEE
Confidence 4555 5699999998889999999999999999999999999988854347777665 67899999999999999999
Q ss_pred cccc-eeecCCCchhHHHHHHHhhhc
Q psy159 134 HRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 134 ~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|+. ..+.|. +.+ ++.+++.+.+
T Consensus 97 ~G~~~~~~~G~-~~~-~l~~~l~~~l 120 (121)
T 2j23_A 97 NGQKIDTVVGA-DPS-KLQAAITQHS 120 (121)
T ss_dssp TTEEEEEEESS-CHH-HHHHHHHHHT
T ss_pred CCeEEeeEcCC-CHH-HHHHHHHHhh
Confidence 8886 457887 554 8999987653
No 103
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.69 E-value=3.3e-16 Score=115.06 Aligned_cols=87 Identities=13% Similarity=0.335 Sum_probs=77.5
Q ss_pred ccccccccHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 160 EDRIELITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
+......+.++|++.+. ++++++|+||++||++|+.+.|.++++++++.+ +.|+.+ .++.++++|+|.++||+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCccccEE
Confidence 34566788999999988 689999999999999999999999999999974 888888 68899999999999999
Q ss_pred EEEeCCeEE-EEecC
Q psy159 235 VYFRNGNPL-IFEGE 248 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~ 248 (285)
+++++|+.+ .+.|.
T Consensus 89 ~~~~~G~~~~~~~G~ 103 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA 103 (116)
T ss_dssp EEESSSSEEEEEESC
T ss_pred EEEeCCeEEEEEcCC
Confidence 999999876 67787
No 104
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.69 E-value=1.5e-16 Score=117.10 Aligned_cols=86 Identities=15% Similarity=0.262 Sum_probs=72.5
Q ss_pred ceeecChhHHHHHHhc-CC--cEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEc
Q psy159 57 EIEEVNRRMLDKLLEE-NE--FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 57 ~v~~l~~~~f~~~~~~-~~--~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~ 133 (285)
.+.++|.++|.+.+.+ ++ +++|.|||+||++|+.+.|.++++|+++. ++.|+++|-.+.+.+|+|.+.||+++|+
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~~~~~~v~~~PT~~~fk 81 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSCIQHYHDNCLPTIFVYK 81 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGTSTTCCGGGCSEEEEEE
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHhHHHCCCCCCCEEEEEE
Confidence 4788899999987654 33 89999999999999999999999999985 4889998855557999999999999999
Q ss_pred cccce-eecCCC
Q psy159 134 HRFPS-IYRGDL 144 (285)
Q Consensus 134 ~g~~~-~y~g~~ 144 (285)
+|+.+ .+.|..
T Consensus 82 ~G~~v~~~~G~~ 93 (118)
T 3evi_A 82 NGQIEAKFIGII 93 (118)
T ss_dssp TTEEEEEEESTT
T ss_pred CCEEEEEEeChh
Confidence 99873 455543
No 105
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.69 E-value=2.9e-16 Score=114.59 Aligned_cols=96 Identities=19% Similarity=0.258 Sum_probs=81.2
Q ss_pred cccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeC
Q psy159 163 IELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 163 v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~ 239 (285)
+..++.++|++.+ ++++++|.||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++|+++++++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 80 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQETAGKYGVMSIPTLLVLKD 80 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTCCSHHHHTTCCSBSEEEEEET
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCCcccEEEEEeC
Confidence 3467888898888 889999999999999999999999999999986 6889888 5778999999999999999999
Q ss_pred CeEE-EEecCCccchhHHHHHhhh
Q psy159 240 GNPL-IFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 240 g~~~-~y~g~~~~e~~~~~~~~~~ 262 (285)
|+.+ .+.|..+. +.+..++.+
T Consensus 81 G~~~~~~~G~~~~--~~l~~~l~~ 102 (112)
T 2voc_A 81 GEVVETSVGFKPK--EALQELVNK 102 (112)
T ss_dssp TEEEEEEESCCCH--HHHHHHHHT
T ss_pred CEEEEEEeCCCCH--HHHHHHHHH
Confidence 9876 78898763 334555443
No 106
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.68 E-value=2.1e-16 Score=120.00 Aligned_cols=101 Identities=19% Similarity=0.278 Sum_probs=73.4
Q ss_pred cceeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEE
Q psy159 56 NEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 56 ~~v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~ 132 (285)
+.+.+++.++|+..+..++.++|.||++||++|+.+.|.|+++++.+.+ ++.++.+| ++.++++|+|.++||+++|
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCHHHHHHCCCCccCEEEEE
Confidence 4588899999999876655599999999999999999999999999864 37887776 7889999999999999999
Q ss_pred ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 133 RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 133 ~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++|+. ..+.|..+.+ ++.+|+.+.+
T Consensus 112 ~~G~~~~~~~G~~~~~-~l~~~i~~~l 137 (140)
T 1v98_A 112 RRGAPVATWVGASPRR-VLEERLRPYL 137 (140)
T ss_dssp ETTEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred eCCcEEEEEeCCCCHH-HHHHHHHHHH
Confidence 99986 4588988775 8999988654
No 107
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.68 E-value=5.7e-17 Score=121.27 Aligned_cols=97 Identities=12% Similarity=0.301 Sum_probs=80.4
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEcc
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRH 134 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~ 134 (285)
+..++.+.++....++++++|.||++||++|+++.|.++++++.+++ ++.++.+| ++.++++|+|.++||++++++
T Consensus 27 ~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 105 (128)
T 3ul3_B 27 LQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKNESLARKFSVKSLPTIILLKN 105 (128)
T ss_dssp CCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEET
T ss_pred cccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCCcCEEEEEEC
Confidence 33444444555566789999999999999999999999999999863 37777776 789999999999999999988
Q ss_pred ccc-eeecCCCchhHHHHHHHhh
Q psy159 135 RFP-SIYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 135 g~~-~~y~g~~~~~~~l~~fi~~ 156 (285)
|+. ..+.|..+.+ ++.+++.+
T Consensus 106 G~~~~~~~G~~~~~-~l~~~l~~ 127 (128)
T 3ul3_B 106 KTMLARKDHFVSSN-DLIALIKK 127 (128)
T ss_dssp TEEEEEESSCCCHH-HHHHHHTT
T ss_pred CEEEEEecCCCCHH-HHHHHHHh
Confidence 886 5688888875 89999875
No 108
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=2.7e-16 Score=119.22 Aligned_cols=100 Identities=16% Similarity=0.360 Sum_probs=84.6
Q ss_pred cccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcC--CeEEEEE---cChHHHHhcCCcccCeEE
Q psy159 161 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIY--GIHMVKI---QDPQLAKRYSIKTFPALV 235 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~--~i~~~~i---~~~~~~~~~~v~~~Ptl~ 235 (285)
+.+..++.++|++.+.++++++|+||++||++|+.+.|.++++++++.+. ++.|+.+ .+..++++|+|.++||++
T Consensus 17 ~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 96 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIK 96 (140)
T ss_dssp TTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEE
T ss_pred CCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEE
Confidence 45667899999999988999999999999999999999999999998752 3889888 578899999999999999
Q ss_pred EEeCCeEEEEecCCccchhHHHHHhhh
Q psy159 236 YFRNGNPLIFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 236 ~~~~g~~~~y~g~~~~e~~~~~~~~~~ 262 (285)
+|++|+...|.|.++.+ .+..|+.+
T Consensus 97 ~~~~G~~~~~~g~~~~~--~l~~~l~~ 121 (140)
T 2dj1_A 97 ILKKGQAVDYDGSRTQE--EIVAKVRE 121 (140)
T ss_dssp EEETTEEEECCSCCCHH--HHHHHHHH
T ss_pred EEECCcEEEcCCCCCHH--HHHHHHHH
Confidence 99999966888987633 34555544
No 109
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.68 E-value=6.1e-16 Score=112.30 Aligned_cols=86 Identities=21% Similarity=0.430 Sum_probs=76.6
Q ss_pred ccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 162 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
.....+.++|++.+.++++++|+||++||++|+.+.|.++++++++.+ +.|+.+ .++.++++|+|.++||+++++
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 85 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDELGDVAQKNEVSAMPTLLLFK 85 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCCccCEEEEEE
Confidence 344667889999999899999999999999999999999999999874 788888 778999999999999999999
Q ss_pred CCeEE-EEecCC
Q psy159 239 NGNPL-IFEGEN 249 (285)
Q Consensus 239 ~g~~~-~y~g~~ 249 (285)
+|+.+ .+.|..
T Consensus 86 ~G~~~~~~~G~~ 97 (109)
T 3f3q_A 86 NGKEVAKVVGAN 97 (109)
T ss_dssp TTEEEEEEESSC
T ss_pred CCEEEEEEeCCC
Confidence 99877 777873
No 110
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.67 E-value=4.7e-16 Score=111.89 Aligned_cols=87 Identities=24% Similarity=0.489 Sum_probs=78.1
Q ss_pred ccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 162 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
.+..++.++|++.+ ++++++|+||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++||+++++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEG-KADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 35577888999888 889999999999999999999999999999986 5888888 688899999999999999999
Q ss_pred CCeEE-EEecCCc
Q psy159 239 NGNPL-IFEGENK 250 (285)
Q Consensus 239 ~g~~~-~y~g~~~ 250 (285)
+|+.+ .+.|..+
T Consensus 82 ~G~~~~~~~g~~~ 94 (106)
T 3die_A 82 DGQPVDKVVGFQP 94 (106)
T ss_dssp TTEEEEEEESCCC
T ss_pred CCeEEEEEeCCCC
Confidence 99876 7888775
No 111
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.2e-14 Score=121.34 Aligned_cols=213 Identities=9% Similarity=0.119 Sum_probs=148.8
Q ss_pred eeec-ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEccc-
Q psy159 58 IEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRHR- 135 (285)
Q Consensus 58 v~~l-~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~~g- 135 (285)
+.++ +.+.++.++.+++.++|.|+++||+. ..+.|.++|..+++. +.|+.+.+.++++++++.+ |++++|+++
T Consensus 8 v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~---~~~~f~~~A~~lr~~-~~F~~~~~~~v~~~~~~~~-p~i~~fk~~~ 82 (252)
T 2h8l_A 8 SVPLRTEEEFKKFISDKDASIVGFFDDSFSE---AHSEFLKAASNLRDN-YRFAHTNVESLVNEYDDNG-EGIILFRPSH 82 (252)
T ss_dssp EEECCSHHHHHHHHTSSSCEEEEEESCTTSH---HHHHHHHHHHHTTTT-SCEEEECCHHHHHHHCSSS-EEEEEECCGG
T ss_pred ceeecCHHHHHHHhhcCCeEEEEEECCCCCh---HHHHHHHHHHhcccC-cEEEEEChHHHHHHhCCCC-CcEEEEcchh
Confidence 8888 57888898988889999999998654 678999999999543 8899888999999999997 999999863
Q ss_pred -------cceee-cCCCchhHHHHHHHhhhccccccccccHHHHHHHHHhCCeEEEEEECCCCh---h-hHHHHHHHHHH
Q psy159 136 -------FPSIY-RGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCN---I-CDQILEGLEKV 203 (285)
Q Consensus 136 -------~~~~y-~g~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~---~-c~~~~~~~~~l 203 (285)
....| .|..+.+ +|.+||..+..|. +..++.+++..+ .+.++++.|+...+. . ...+...+.++
T Consensus 83 ~~~kf~e~~~~y~~g~~~~~-~l~~fi~~~~~Pl-v~e~t~~n~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v 158 (252)
T 2h8l_A 83 LTNKFEDKTVAYTEQKMTSG-KIKKFIQENIFGI-CPHMTEDNKDLI--QGKDLLIAYYDVDYEKNAKGSNYWRNRVMMV 158 (252)
T ss_dssp GCCTTSCSEEECCCSSCCHH-HHHHHHHHHSSCS-SCEECTTTHHHH--SSSSEEEEEECCBTTTBHHHHHHHHHHHHHH
T ss_pred hcccccccccccCCCCcCHH-HHHHHHHhcccCC-eeecccccHhhh--cCCCeEEEEeecchhhcchhHHHHHHHHHHH
Confidence 34679 9988765 8999999998754 558888888775 345666677654332 1 22477888889
Q ss_pred HhhcCcCC---eEEEEE---cChHHHHhcCC----cccCeEEEEe-CCeEEEEecCCccchhHHHHHhhhcCCCCCCCCC
Q psy159 204 DDECDIYG---IHMVKI---QDPQLAKRYSI----KTFPALVYFR-NGNPLIFEGENKILKGTYIGTYISTKAFSLIPFC 272 (285)
Q Consensus 204 a~~~~~~~---i~~~~i---~~~~~~~~~~v----~~~Ptl~~~~-~g~~~~y~g~~~~e~~~~~~~~~~~~~~~~~~e~ 272 (285)
|+++++ + +.|+.+ ....+.+.||+ ..+|+++++. ++..+.+++..+.+...+..|+.+-..-.+-|.+
T Consensus 159 A~~~~~-k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~~~i~~F~~~~~~Gkl~~~~ 237 (252)
T 2h8l_A 159 AKKFLD-AGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYL 237 (252)
T ss_dssp HHHHHH-TTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTSHHHHHHHHHHHHTCSCCCC
T ss_pred HHHccc-cCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcchHHHHHHHHHHHCCCccccc
Confidence 999986 4 899999 55668889999 3689999984 3555556665553321134443322211223445
Q ss_pred CCCCCCCc
Q psy159 273 FSEKHPGA 280 (285)
Q Consensus 273 ~~~~~~~~ 280 (285)
-||.-|..
T Consensus 238 kSe~iPe~ 245 (252)
T 2h8l_A 238 KSEPIPES 245 (252)
T ss_dssp --------
T ss_pred cCCCCCCC
Confidence 55555543
No 112
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.67 E-value=3.8e-16 Score=114.84 Aligned_cols=98 Identities=13% Similarity=0.211 Sum_probs=77.3
Q ss_pred cccccHHHHHHHHHh-CC--eEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEcChHHHHhcCCcccCeEEEEeC
Q psy159 163 IELITRVMLETMVEE-TQ--YLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 163 v~~~~~~~~~~~~~~-~~--~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~~v~~~Ptl~~~~~ 239 (285)
+..++.++|.+.+.+ ++ +++|+|||+||++|+.+.|.++++|+++. +++|++++-...+++|+|+++||+++|++
T Consensus 5 v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~~~~~~v~~~PT~~~fk~ 82 (118)
T 3evi_A 5 LREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSCIQHYHDNCLPTIFVYKN 82 (118)
T ss_dssp CEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGTSTTCCGGGCSEEEEEET
T ss_pred eEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHhHHHCCCCCCCEEEEEEC
Confidence 446688888886654 33 89999999999999999999999999986 58999994444478999999999999999
Q ss_pred CeEE-EEecCCc-----cchhHHHHHhhhc
Q psy159 240 GNPL-IFEGENK-----ILKGTYIGTYIST 263 (285)
Q Consensus 240 g~~~-~y~g~~~-----~e~~~~~~~~~~~ 263 (285)
|+.+ ++.|... .... .+.+++.+
T Consensus 83 G~~v~~~~G~~~~gg~~~~~~-~le~~L~~ 111 (118)
T 3evi_A 83 GQIEAKFIGIIECGGINLKLE-ELEWKLAE 111 (118)
T ss_dssp TEEEEEEESTTTTTCSSCCHH-HHHHHHHT
T ss_pred CEEEEEEeChhhhCCCCCCHH-HHHHHHHH
Confidence 9987 6776432 1222 36777654
No 113
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.67 E-value=3.7e-16 Score=118.75 Aligned_cols=90 Identities=19% Similarity=0.365 Sum_probs=80.3
Q ss_pred ccccccccHHHHHH-HHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEE
Q psy159 160 EDRIELITRVMLET-MVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 235 (285)
Q Consensus 160 ~~~v~~~~~~~~~~-~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~ 235 (285)
.+.+..++.++|++ ++.++++++|+||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNPWTAEKYGVQGTPTFK 83 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCHHHHHHHTCCEESEEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCHhHHHHCCCCcCCEEE
Confidence 45667889999984 566789999999999999999999999999999986 6899988 688999999999999999
Q ss_pred EEeCCeEE-EEecCCc
Q psy159 236 YFRNGNPL-IFEGENK 250 (285)
Q Consensus 236 ~~~~g~~~-~y~g~~~ 250 (285)
+|++|+.+ .|.|..+
T Consensus 84 ~~~~G~~~~~~~G~~~ 99 (140)
T 3hz4_A 84 FFCHGRPVWEQVGQIY 99 (140)
T ss_dssp EEETTEEEEEEESSCC
T ss_pred EEeCCcEEEEEcCCCC
Confidence 99999887 7888875
No 114
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.67 E-value=5e-16 Score=111.64 Aligned_cols=86 Identities=19% Similarity=0.426 Sum_probs=76.7
Q ss_pred ccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeCC
Q psy159 164 ELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNG 240 (285)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g 240 (285)
..++.++|++.++++++++|.||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++|+++++++|
T Consensus 3 ~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 81 (105)
T 1nsw_A 3 MTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDENPETTSQFGIMSIPTLILFKGG 81 (105)
T ss_dssp EEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred eeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCCHHHHHHcCCccccEEEEEeCC
Confidence 4677888988788889999999999999999999999999999986 5888888 67889999999999999999999
Q ss_pred eEE-EEecCCc
Q psy159 241 NPL-IFEGENK 250 (285)
Q Consensus 241 ~~~-~y~g~~~ 250 (285)
+.+ .+.|..+
T Consensus 82 ~~~~~~~G~~~ 92 (105)
T 1nsw_A 82 RPVKQLIGYQP 92 (105)
T ss_dssp EEEEEEESCCC
T ss_pred eEEEEEecCCC
Confidence 876 6788775
No 115
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.67 E-value=8e-16 Score=111.09 Aligned_cols=87 Identities=22% Similarity=0.474 Sum_probs=78.3
Q ss_pred cccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeC
Q psy159 163 IELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 163 v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~ 239 (285)
+..++.++|++.++++++++|+||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++|+++++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENPKTAMRYRVMSIPTVILFKD 81 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCHhHHHhCCCCcCCEEEEEeC
Confidence 45788889998888899999999999999999999999999999986 6889888 6788999999999999999999
Q ss_pred CeEE-EEecCCc
Q psy159 240 GNPL-IFEGENK 250 (285)
Q Consensus 240 g~~~-~y~g~~~ 250 (285)
|+.+ .+.|..+
T Consensus 82 g~~~~~~~g~~~ 93 (109)
T 2yzu_A 82 GQPVEVLVGAQP 93 (109)
T ss_dssp TEEEEEEESCCC
T ss_pred CcEeeeEeCCCC
Confidence 9876 6888775
No 116
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.67 E-value=7e-16 Score=112.32 Aligned_cols=85 Identities=14% Similarity=0.355 Sum_probs=71.6
Q ss_pred cccH-HHHHHHHHh---CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEE
Q psy159 165 LITR-VMLETMVEE---TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 165 ~~~~-~~~~~~~~~---~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~ 237 (285)
.++. ++|++.+.+ +++++|.||++||++|+.+.|.+++++++++..++.|+.+ .++.++++|+|.++||++++
T Consensus 4 ~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 83 (112)
T 3d6i_A 4 EINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIII 83 (112)
T ss_dssp EECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEEEE
Confidence 4454 889998875 8899999999999999999999999999964335889888 67889999999999999999
Q ss_pred eCCeEE-EEecCC
Q psy159 238 RNGNPL-IFEGEN 249 (285)
Q Consensus 238 ~~g~~~-~y~g~~ 249 (285)
++|+.+ .+.|..
T Consensus 84 ~~G~~~~~~~G~~ 96 (112)
T 3d6i_A 84 HKGTILKELSGAD 96 (112)
T ss_dssp ETTEEEEEECSCC
T ss_pred ECCEEEEEecCCC
Confidence 999877 677864
No 117
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.67 E-value=1.1e-16 Score=121.93 Aligned_cols=102 Identities=10% Similarity=0.092 Sum_probs=74.1
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCC--ChhHHHHHHHHHhHHhhcCCCCcE--EEEeC---ChhHHhhhCCCCCCeEE
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETD--HKDSVKVLERLEKIDGETDNMDIT--FVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~--c~~C~~~~~~~~~~a~~~~~~~v~--~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
+..+|+++|++.+.+++.++|.|+++| |++|+.+.|.|+++++++ + ++. ++++| +++++++|+|.++||++
T Consensus 19 ~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~ 96 (142)
T 2es7_A 19 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQSEAIGDRFNVRRFPATL 96 (142)
T ss_dssp CEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHHHHHHHTTTCCSSSEEE
T ss_pred CcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCCHHHHHhcCCCcCCeEE
Confidence 788999999999988778899999887 999999999999999998 3 366 88888 67899999999999999
Q ss_pred EEccccc-eeecCCCchhHHHHHHHhhhccccc
Q psy159 131 YFRHRFP-SIYRGDLSEEEEVLQWLITQKTEDR 162 (285)
Q Consensus 131 ~~~~g~~-~~y~g~~~~~~~l~~fi~~~~~~~~ 162 (285)
+|++|+. ..+.|..+.+ +|.+++.+....+.
T Consensus 97 ~fk~G~~v~~~~G~~~~~-~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 97 VFTDGKLRGALSGIHPWA-ELLTLMRSIVDTPA 128 (142)
T ss_dssp EESCC----CEESCCCHH-HHHHHHHHHHC---
T ss_pred EEeCCEEEEEEeCCCCHH-HHHHHHHHHhcccc
Confidence 9999987 5688988775 89999988775443
No 118
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=6.6e-16 Score=115.91 Aligned_cols=90 Identities=20% Similarity=0.399 Sum_probs=78.4
Q ss_pred ccccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcC----cCCeEEEEE---cChHHHHhcCCccc
Q psy159 160 EDRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECD----IYGIHMVKI---QDPQLAKRYSIKTF 231 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~----~~~i~~~~i---~~~~~~~~~~v~~~ 231 (285)
...+..++.++|++.+ .++++++|+||++||++|+.+.|.++++++++. + ++.|+.+ .++.++++|+|.++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG-KVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT-SEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC-cEEEEEEECCCCHHHHHhCCCCee
Confidence 3456688999999875 568899999999999999999999999999986 4 6889888 67789999999999
Q ss_pred CeEEEEeCCeEE-EEecCCc
Q psy159 232 PALVYFRNGNPL-IFEGENK 250 (285)
Q Consensus 232 Ptl~~~~~g~~~-~y~g~~~ 250 (285)
||+++|++|+.+ .|.|.++
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~ 104 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRT 104 (133)
T ss_dssp SEEEEEETTEEEEEECSCCS
T ss_pred CeEEEEeCCCceEEecCCCC
Confidence 999999999855 7888775
No 119
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.3e-16 Score=133.27 Aligned_cols=110 Identities=17% Similarity=0.337 Sum_probs=89.4
Q ss_pred ccccccccHHHHHHHHH-hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-----cChHHHHhcCCcccCe
Q psy159 160 EDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-----QDPQLAKRYSIKTFPA 233 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~-~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-----~~~~~~~~~~v~~~Pt 233 (285)
++.+..++.++|++.+. .+++++|+|||+||++|+.+.|.|+++++++.+ .+.++.+ .+..+|++|+|.++||
T Consensus 16 ~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~~~~~~l~~~~~I~~~Pt 94 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDLNKNKALCAKYDVNGFPT 94 (298)
T ss_dssp CTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTSTTTHHHHHHTTCCBSSE
T ss_pred CCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccCccCHHHHHhCCCCccce
Confidence 45667899999999985 578899999999999999999999999999986 5777777 3688999999999999
Q ss_pred EEEEeCCe------------------EEEEecCCccchhHHHHHhhhcCCCCCCCCCC
Q psy159 234 LVYFRNGN------------------PLIFEGENKILKGTYIGTYISTKAFSLIPFCF 273 (285)
Q Consensus 234 l~~~~~g~------------------~~~y~g~~~~e~~~~~~~~~~~~~~~~~~e~~ 273 (285)
+++|++|+ ...|.|.++ .+.++.|+.+... +.+.+++
T Consensus 95 ~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~--~~~i~~fl~~~~~-~~v~~i~ 149 (298)
T 3ed3_A 95 LMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGART--LAPIVDFSLSRIR-SYVKKFV 149 (298)
T ss_dssp EEEEECCCC-------------CCCEEEECCSCCS--HHHHHHHHHTTCC-CCEEECS
T ss_pred EEEEECCceeecccccccccccccccceeecCCcC--HHHHHHHHHHhcc-cccEEcC
Confidence 99999986 569999986 3345666665433 3333443
No 120
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.67 E-value=9.8e-16 Score=112.45 Aligned_cols=99 Identities=9% Similarity=0.155 Sum_probs=82.3
Q ss_pred ceeec-ChhHHHHHHhc----CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCe
Q psy159 57 EIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 128 (285)
Q Consensus 57 ~v~~l-~~~~f~~~~~~----~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Pt 128 (285)
.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. ++.++.+| ++.++++|+|.++|+
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt 84 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEAMPT 84 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSBSE
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCcCcE
Confidence 36666 68999998765 7899999999999999999999999999886 47777665 678999999999999
Q ss_pred EEEEccccce-eecCCCchhHHHHHHHhhhcc
Q psy159 129 VVYFRHRFPS-IYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 129 l~~~~~g~~~-~y~g~~~~~~~l~~fi~~~~~ 159 (285)
++++++|+.+ .+.| .+.+ ++.+++.+...
T Consensus 85 ~~~~~~g~~~~~~~g-~~~~-~l~~~l~~~~~ 114 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVG-GRKD-DIHTKIVALMG 114 (118)
T ss_dssp EEEEETTEEEEEEES-CCHH-HHHHHHHHHHC
T ss_pred EEEEeCCeEEEEecC-CCHH-HHHHHHHHHhc
Confidence 9999988874 5677 4544 79998877653
No 121
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.66 E-value=7.8e-16 Score=119.04 Aligned_cols=88 Identities=23% Similarity=0.384 Sum_probs=78.5
Q ss_pred ccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 162 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
.+..++.++|++.+.++++++|+||++||++|+.+.|.|+++++++.+ ++.|+.+ .++.++++|+|+++||+++|+
T Consensus 48 ~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~ 126 (155)
T 2ppt_A 48 KVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHPAVAGRHRIQGIPAFILFH 126 (155)
T ss_dssp SEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTSTHHHHHTTCCSSSEEEEEE
T ss_pred CCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccHHHHHHcCCCcCCEEEEEe
Confidence 345678889998887788999999999999999999999999999986 6999999 678899999999999999999
Q ss_pred CCeEE-EEecCCc
Q psy159 239 NGNPL-IFEGENK 250 (285)
Q Consensus 239 ~g~~~-~y~g~~~ 250 (285)
+|+.+ .+.|..+
T Consensus 127 ~G~~~~~~~G~~~ 139 (155)
T 2ppt_A 127 KGRELARAAGARP 139 (155)
T ss_dssp TTEEEEEEESCCC
T ss_pred CCeEEEEecCCCC
Confidence 99876 6888775
No 122
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.66 E-value=9e-16 Score=113.08 Aligned_cols=99 Identities=20% Similarity=0.246 Sum_probs=81.2
Q ss_pred ceeec--ChhHHHHH-HhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEE
Q psy159 57 EIEEV--NRRMLDKL-LEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 130 (285)
Q Consensus 57 ~v~~l--~~~~f~~~-~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~ 130 (285)
.+..+ +.++|++. .+++++++|.||++||++|+.+.|.++++++.+ .++.++.+| ++.++++|+|.++||++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGNAADAYGVSSIPALF 81 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 36666 68899854 466889999999999999999999999999988 347777776 78899999999999999
Q ss_pred EEcc----ccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 131 YFRH----RFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 131 ~~~~----g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+|++ |+. ..+.|.... +|.+.+.+...
T Consensus 82 ~~~~~~~~G~~~~~~~G~~~~--~l~~~~~~~~~ 113 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGADVS--RIKADIEKFKH 113 (118)
T ss_dssp EEEEETTEEEEEEEEESCCHH--HHHHHHHHHC-
T ss_pred EEeCCCCcceEEEeecCCCHH--HHHHHHHHhhh
Confidence 9988 766 457787653 58888877654
No 123
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.66 E-value=7.2e-16 Score=112.28 Aligned_cols=97 Identities=11% Similarity=0.223 Sum_probs=81.2
Q ss_pred eeec-ChhHHHHHHhc----CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 58 IEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 58 v~~l-~~~~f~~~~~~----~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
+..+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. ++.++.+| ++.++++|+|.++|++
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 83 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEAMPTF 83 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSSTTEE
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCcccEE
Confidence 5566 78999998865 7899999999999999999999999999886 47777765 6789999999999999
Q ss_pred EEEccccce-eecCCCchhHHHHHHHhhhc
Q psy159 130 VYFRHRFPS-IYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 130 ~~~~~g~~~-~y~g~~~~~~~l~~fi~~~~ 158 (285)
+++++|+.+ .+.| .+.+ ++.+++.+.+
T Consensus 84 ~~~~~G~~~~~~~g-~~~~-~l~~~l~~~~ 111 (113)
T 1ti3_A 84 IFLKDGKLVDKTVG-ADKD-GLPTLVAKHA 111 (113)
T ss_dssp EEEETTEEEEEEEC-CCTT-HHHHHHHHHH
T ss_pred EEEeCCEEEEEEec-CCHH-HHHHHHHHhh
Confidence 999988874 4667 4554 7888887653
No 124
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.66 E-value=3.9e-16 Score=118.93 Aligned_cols=95 Identities=16% Similarity=0.191 Sum_probs=75.7
Q ss_pred ChhHHHHHHh--cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEcccc
Q psy159 62 NRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRF 136 (285)
Q Consensus 62 ~~~~f~~~~~--~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~ 136 (285)
+.++|+..+. ++++++|.|||+||++|+.+.|.++++++.+++ ++.++.+| +++++++|+|.++||+++|++|+
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~ 88 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNK 88 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHHHHHHcCCCCCCEEEEEECCc
Confidence 6788987664 478999999999999999999999999999854 37777776 67899999999999999999987
Q ss_pred cee----------ecCCCchhHHHHHHHhhh
Q psy159 137 PSI----------YRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 137 ~~~----------y~g~~~~~~~l~~fi~~~ 157 (285)
.+. ..|.....+++.++++..
T Consensus 89 ~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 89 HIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp EEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred EEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 653 344443233676666543
No 125
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.66 E-value=1.7e-15 Score=110.43 Aligned_cols=87 Identities=14% Similarity=0.376 Sum_probs=78.0
Q ss_pred ccccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 160 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
++....++.++|++.++++++++|+||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++|++++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 85 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVSEVTEKENITSMPTFKV 85 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 5667788999999999999999999999999999999999999999987 4888888 6788999999999999999
Q ss_pred EeCCeEE-EEecC
Q psy159 237 FRNGNPL-IFEGE 248 (285)
Q Consensus 237 ~~~g~~~-~y~g~ 248 (285)
+++|+.+ .+.|.
T Consensus 86 ~~~G~~~~~~~G~ 98 (112)
T 1syr_A 86 YKNGSSVDTLLGA 98 (112)
T ss_dssp EETTEEEEEEESC
T ss_pred EECCcEEEEEeCC
Confidence 9999876 67786
No 126
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.66 E-value=1.1e-16 Score=115.40 Aligned_cols=83 Identities=25% Similarity=0.399 Sum_probs=62.1
Q ss_pred ccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeCCeE
Q psy159 166 ITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNP 242 (285)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~~ 242 (285)
.+.++|++.++++++++|+||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++||++++++|+.
T Consensus 6 ~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 83 (105)
T 4euy_A 6 KTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKE 83 (105)
T ss_dssp ----CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CCCCEEEEEETTEE
T ss_pred CCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeE
Confidence 3455676767778999999999999999999999999999985 5888888 6788999999999999999999987
Q ss_pred E-EEecCCc
Q psy159 243 L-IFEGENK 250 (285)
Q Consensus 243 ~-~y~g~~~ 250 (285)
+ .+.|..+
T Consensus 84 ~~~~~g~~~ 92 (105)
T 4euy_A 84 ILRESRFIS 92 (105)
T ss_dssp EEEEESSCC
T ss_pred EEEEeCCcC
Confidence 6 7788775
No 127
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.66 E-value=1.4e-15 Score=112.21 Aligned_cols=91 Identities=20% Similarity=0.314 Sum_probs=80.1
Q ss_pred cccccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 159 TEDRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 159 ~~~~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
.++.+..++.++|++.+ +++++++|+||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++|++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 89 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHTDLAIEYEVSAVPTV 89 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcccEE
Confidence 35677889999998865 5688999999999999999999999999999876 6889888 67789999999999999
Q ss_pred EEEeCCeEE-EEecCCc
Q psy159 235 VYFRNGNPL-IFEGENK 250 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~~~ 250 (285)
+++++|+.+ .+.|..+
T Consensus 90 ~~~~~G~~~~~~~G~~~ 106 (119)
T 1w4v_A 90 LAMKNGDVVDKFVGIKD 106 (119)
T ss_dssp EEEETTEEEEEEESCCC
T ss_pred EEEeCCcEEEEEcCCCC
Confidence 999999876 7788765
No 128
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.66 E-value=1.2e-15 Score=110.11 Aligned_cols=84 Identities=15% Similarity=0.300 Sum_probs=73.4
Q ss_pred ccccHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 164 ELITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 164 ~~~~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
...+.++|++.+. ++++++|.||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++||+++++
T Consensus 5 ~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 82 (107)
T 1gh2_A 5 PVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQCQGTAATNNISATPTFQFFR 82 (107)
T ss_dssp EECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSSSEEEEEE
T ss_pred EecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHhcCCCcccEEEEEE
Confidence 3446788988874 58899999999999999999999999999985 5888888 678899999999999999999
Q ss_pred CCeEE-EEecCC
Q psy159 239 NGNPL-IFEGEN 249 (285)
Q Consensus 239 ~g~~~-~y~g~~ 249 (285)
+|+.+ .+.|..
T Consensus 83 ~G~~~~~~~G~~ 94 (107)
T 1gh2_A 83 NKVRIDQYQGAD 94 (107)
T ss_dssp TTEEEEEEESSC
T ss_pred CCeEEEEEeCCC
Confidence 99877 678854
No 129
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.66 E-value=6.9e-16 Score=111.50 Aligned_cols=88 Identities=27% Similarity=0.442 Sum_probs=76.9
Q ss_pred ccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEE
Q psy159 162 RIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 162 ~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~ 237 (285)
.+..++.++|++.+ .++++++|.||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++|+++++
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 45577888898654 5688999999999999999999999999999986 6889888 57889999999999999999
Q ss_pred eCCeEE-EEecCCc
Q psy159 238 RNGNPL-IFEGENK 250 (285)
Q Consensus 238 ~~g~~~-~y~g~~~ 250 (285)
++|+.+ .+.|..+
T Consensus 82 ~~G~~~~~~~G~~~ 95 (108)
T 2trx_A 82 KNGEVAATKVGALS 95 (108)
T ss_dssp ETTEEEEEEESCCC
T ss_pred eCCEEEEEEecCCC
Confidence 999876 6788775
No 130
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.66 E-value=1.1e-15 Score=110.19 Aligned_cols=88 Identities=18% Similarity=0.375 Sum_probs=77.4
Q ss_pred ccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEE
Q psy159 162 RIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 162 ~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~ 237 (285)
.+..++.++|++.+ .++++++|.||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++|+++++
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 45578888898765 5688999999999999999999999999999986 6889988 67889999999999999999
Q ss_pred eCCeEE-EEecCCc
Q psy159 238 RNGNPL-IFEGENK 250 (285)
Q Consensus 238 ~~g~~~-~y~g~~~ 250 (285)
++|+.+ .+.|..+
T Consensus 82 ~~G~~~~~~~G~~~ 95 (107)
T 2i4a_A 82 RDGKVIDKKVGALP 95 (107)
T ss_dssp ETTEEEEEEESCCC
T ss_pred eCCEEEEEecCCCC
Confidence 999876 6788775
No 131
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.66 E-value=7.8e-16 Score=117.99 Aligned_cols=90 Identities=19% Similarity=0.460 Sum_probs=80.9
Q ss_pred ccccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 160 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
...+..++.++|++.+.++++++|+||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||+++
T Consensus 37 ~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 115 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPALSTRFRIRSIPTIML 115 (148)
T ss_dssp CCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHHHHHHCCCCccCEEEE
Confidence 34566888899999888899999999999999999999999999999976 6899988 7889999999999999999
Q ss_pred EeCCeEE-EEecCCc
Q psy159 237 FRNGNPL-IFEGENK 250 (285)
Q Consensus 237 ~~~g~~~-~y~g~~~ 250 (285)
|++|+.+ .|.|.++
T Consensus 116 ~~~G~~~~~~~G~~~ 130 (148)
T 3p2a_A 116 YRNGKMIDMLNGAVP 130 (148)
T ss_dssp EETTEEEEEESSCCC
T ss_pred EECCeEEEEEeCCCC
Confidence 9999876 6888875
No 132
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.65 E-value=1.5e-15 Score=108.56 Aligned_cols=85 Identities=18% Similarity=0.465 Sum_probs=76.4
Q ss_pred ccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeCC
Q psy159 164 ELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNG 240 (285)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g 240 (285)
..++.++|++.+.++++++|+||++||++|+.+.|.++++++.+.+ +.++.+ .++.++++|++.++|+++++++|
T Consensus 2 ~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 79 (104)
T 2e0q_A 2 IHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENPDIAARYGVMSLPTVIFFKDG 79 (104)
T ss_dssp EECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSCEEEEEETT
T ss_pred eecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCHHHHHhCCccccCEEEEEECC
Confidence 3578888999888899999999999999999999999999999875 888888 67889999999999999999999
Q ss_pred eEE-EEecCCc
Q psy159 241 NPL-IFEGENK 250 (285)
Q Consensus 241 ~~~-~y~g~~~ 250 (285)
+.+ .+.|..+
T Consensus 80 ~~~~~~~g~~~ 90 (104)
T 2e0q_A 80 EPVDEIIGAVP 90 (104)
T ss_dssp EEEEEEESCCC
T ss_pred eEhhhccCCCC
Confidence 876 7888775
No 133
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.65 E-value=7.5e-16 Score=113.39 Aligned_cols=88 Identities=18% Similarity=0.304 Sum_probs=75.5
Q ss_pred ccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc-------ChHHHHhcCCcccCeE
Q psy159 162 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ-------DPQLAKRYSIKTFPAL 234 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~-------~~~~~~~~~v~~~Ptl 234 (285)
.+..++.+++++.+.++++++|+||++||++|+.+.|.++++++++.. .+.++.++ ...++++|+|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~ 91 (118)
T 1zma_A 13 DLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYFINSEEPSQLNDLQAFRSRYGIPTVPGF 91 (118)
T ss_dssp TSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEEEETTCGGGHHHHHHHHHHHTCCSSCEE
T ss_pred hhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEEEECCCcCcHHHHHHHHHHcCCCCCCeE
Confidence 455778899999998889999999999999999999999999998874 57777651 2468899999999999
Q ss_pred EEEeCCeEE-EEecCCc
Q psy159 235 VYFRNGNPL-IFEGENK 250 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~~~ 250 (285)
+++++|+.+ ++.|.++
T Consensus 92 ~~~~~G~~~~~~~G~~~ 108 (118)
T 1zma_A 92 VHITDGQINVRCDSSMS 108 (118)
T ss_dssp EEEETTEEEEECCTTCC
T ss_pred EEEECCEEEEEecCCCC
Confidence 999999876 7788775
No 134
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.65 E-value=3.1e-16 Score=116.81 Aligned_cols=101 Identities=13% Similarity=0.193 Sum_probs=82.0
Q ss_pred eeecChhHHH-----HHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-----ChhHHhhhCCCCCC
Q psy159 58 IEEVNRRMLD-----KLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-----DPRYARKWGVTKLP 127 (285)
Q Consensus 58 v~~l~~~~f~-----~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-----~~~l~~~~~i~~~P 127 (285)
+..++..+++ ....++++++|.||++||++|+.+.|.++++++.++ .++.++.+| +..++++|+|.++|
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d~~~~~~~~~~v~~~P 84 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEEKNIDLAYKYDANIVP 84 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSSHHHHHHHHTTCCSSS
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCCchHHHHHHcCCccee
Confidence 4555666665 445667899999999999999999999999999985 246666555 67899999999999
Q ss_pred eEEEEc-cccc-eeecCCCchhHHHHHHHhhhccc
Q psy159 128 AVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQKTE 160 (285)
Q Consensus 128 tl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~~~ 160 (285)
|++++. +|+. ..+.|..+.+ ++.+++.+...+
T Consensus 85 t~~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~~~~ 118 (126)
T 2l57_A 85 TTVFLDKEGNKFYVHQGLMRKN-NIETILNSLGVK 118 (126)
T ss_dssp EEEEECTTCCEEEEEESCCCHH-HHHHHHHHHCCC
T ss_pred EEEEECCCCCEEEEecCCCCHH-HHHHHHHHHhcc
Confidence 999999 7876 4688888775 899999887654
No 135
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.65 E-value=5.9e-16 Score=125.81 Aligned_cols=110 Identities=17% Similarity=0.317 Sum_probs=88.7
Q ss_pred ccccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 160 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
...+..++.++|+..+.++++++|.||++||++|+.+.|.++++++++.+ .+.|+.+ .++.++++|+|.++||+++
T Consensus 96 ~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 174 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRMLCRMKGVNSYPSLFI 174 (210)
T ss_dssp CTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHHHHHHcCCCcCCeEEE
Confidence 45677889999999998899999999999999999999999999999986 6899988 6788999999999999999
Q ss_pred EeCCeEE-EEecCCccchhHHHHHhhhcCCCCCCCCCC
Q psy159 237 FRNGNPL-IFEGENKILKGTYIGTYISTKAFSLIPFCF 273 (285)
Q Consensus 237 ~~~g~~~-~y~g~~~~e~~~~~~~~~~~~~~~~~~e~~ 273 (285)
+++|+.+ .+.|.++.+ .+..++ +....+.+.+++
T Consensus 175 ~~~G~~~~~~~G~~~~~--~l~~~i-~~~l~~~~~~i~ 209 (210)
T 3apq_A 175 FRSGMAAVKYNGDRSKE--SLVAFA-MQHVRSTVTELS 209 (210)
T ss_dssp ECTTSCCEECCSCCCHH--HHHHHH-HHHHHCCSSCC-
T ss_pred EECCCceeEecCCCCHH--HHHHHH-HHhCcccceecC
Confidence 9999854 788877532 234444 333334444544
No 136
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.65 E-value=1.5e-15 Score=113.07 Aligned_cols=83 Identities=17% Similarity=0.376 Sum_probs=74.4
Q ss_pred cccccH-HHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 163 IELITR-VMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 163 v~~~~~-~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
+..++. ++|++.+.++++++|.||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++||+++++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~ 98 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQLPTFIIAR 98 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCcccEEEEEe
Confidence 456666 8999999889999999999999999999999999999985 5888888 678899999999999999999
Q ss_pred CCeEE-EEec
Q psy159 239 NGNPL-IFEG 247 (285)
Q Consensus 239 ~g~~~-~y~g 247 (285)
+|+.+ .+.|
T Consensus 99 ~G~~~~~~~G 108 (125)
T 1r26_A 99 SGKMLGHVIG 108 (125)
T ss_dssp TTEEEEEEES
T ss_pred CCeEEEEEeC
Confidence 99876 6778
No 137
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.65 E-value=3.1e-15 Score=109.49 Aligned_cols=85 Identities=21% Similarity=0.427 Sum_probs=75.1
Q ss_pred cccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeC
Q psy159 163 IELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 163 v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~ 239 (285)
....+.+++++.++++++++|.||++||++|+.+.|.++++++++.+ +.|+.+ .++.++++|+|.++|+++++++
T Consensus 15 ~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 92 (114)
T 2oe3_A 15 TKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTAMPTFVLGKD 92 (114)
T ss_dssp CBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSBSEEEEEET
T ss_pred eecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCcccEEEEEeC
Confidence 34456677888898999999999999999999999999999999874 888888 6788999999999999999999
Q ss_pred CeEE-EEecCC
Q psy159 240 GNPL-IFEGEN 249 (285)
Q Consensus 240 g~~~-~y~g~~ 249 (285)
|+.+ .+.|..
T Consensus 93 G~~~~~~~G~~ 103 (114)
T 2oe3_A 93 GQLIGKIIGAN 103 (114)
T ss_dssp TEEEEEEESSC
T ss_pred CeEEEEEeCCC
Confidence 9876 678876
No 138
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.64 E-value=3.6e-15 Score=107.02 Aligned_cols=82 Identities=15% Similarity=0.406 Sum_probs=73.7
Q ss_pred cccHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeC
Q psy159 165 LITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 165 ~~~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~ 239 (285)
..+.+++++.+. ++++++|.||++||++|+.+.|.++++++++.+ +.++.+ +++.++++|+|.++||++++++
T Consensus 5 i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (105)
T 3m9j_A 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASESEVKSMPTFQFFKK 82 (105)
T ss_dssp CCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTCHHHHHHTTCCBSSEEEEEET
T ss_pred cCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhhHHHHHHcCCCcCcEEEEEEC
Confidence 457788999887 688999999999999999999999999999974 888888 6789999999999999999999
Q ss_pred CeEE-EEecC
Q psy159 240 GNPL-IFEGE 248 (285)
Q Consensus 240 g~~~-~y~g~ 248 (285)
|+.+ .+.|.
T Consensus 83 g~~~~~~~g~ 92 (105)
T 3m9j_A 83 GQKVGEFSGA 92 (105)
T ss_dssp TEEEEEEESS
T ss_pred CeEEEEEeCC
Confidence 9877 67787
No 139
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.64 E-value=1.3e-15 Score=115.60 Aligned_cols=91 Identities=22% Similarity=0.399 Sum_probs=79.1
Q ss_pred ccccccccHHHHHHHHHh------------CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHH
Q psy159 160 EDRIELITRVMLETMVEE------------TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAK 224 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~------------~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~ 224 (285)
+..+..++.++|+..+.+ +++++|+||++||++|+.+.|.++++++.+.+ ++.|+.+ .++.+++
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELAR 99 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHH
Confidence 456678899999887764 78999999999999999999999999999986 6888888 6789999
Q ss_pred hcCCcccCeEEEE-eCCeEEEEecCCcc
Q psy159 225 RYSIKTFPALVYF-RNGNPLIFEGENKI 251 (285)
Q Consensus 225 ~~~v~~~Ptl~~~-~~g~~~~y~g~~~~ 251 (285)
+|+|.++|++++| ++|+.+.+.|.++.
T Consensus 100 ~~~v~~~Pt~~~~~~~g~~~~~~G~~~~ 127 (141)
T 3hxs_A 100 DFGIQSIPTIWFVPMKGEPQVNMGALSK 127 (141)
T ss_dssp HTTCCSSSEEEEECSSSCCEEEESCCCH
T ss_pred HcCCCCcCEEEEEeCCCCEEEEeCCCCH
Confidence 9999999999999 67887888998763
No 140
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.64 E-value=1.4e-15 Score=110.62 Aligned_cols=86 Identities=22% Similarity=0.419 Sum_probs=75.0
Q ss_pred ccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 162 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
.+..++.++| +.+.++++++|.||++||++|+.+.|.+++++..+. ++.|+.+ .++.++++|+|.++||+++|+
T Consensus 4 ~~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 80 (110)
T 2l6c_A 4 IRDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFERVPTLVFIR 80 (110)
T ss_dssp CSBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEE
T ss_pred eeecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcccCEEEEEE
Confidence 4456778888 677778999999999999999999999999999886 4778777 678899999999999999999
Q ss_pred CCeEE-EEecCCc
Q psy159 239 NGNPL-IFEGENK 250 (285)
Q Consensus 239 ~g~~~-~y~g~~~ 250 (285)
+|+.+ ++.|..+
T Consensus 81 ~G~~v~~~~G~~~ 93 (110)
T 2l6c_A 81 DGKVAKVFSGIMN 93 (110)
T ss_dssp SSSEEEEEESCCC
T ss_pred CCEEEEEEcCCCC
Confidence 99877 7888775
No 141
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=1.2e-15 Score=115.16 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=80.6
Q ss_pred ccceeecChhHHHHHHhcC---CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEE
Q psy159 55 KNEIEEVNRRMLDKLLEEN---EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVY 131 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~---~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~ 131 (285)
.+.+.+++.++|+..+.+. ++++|.|||+||++|+.+.|.|+++++.+. ++.|+.+|.....++|+|.++||+++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~~~~~i~~~Pt~~~ 86 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCIEHYHDNCLPTIFV 86 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSCSSCCSSCCSEEEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCcccCCCCCCCEEEE
Confidence 3457888999999987542 589999999999999999999999999874 48888888444458899999999999
Q ss_pred Eccccc-eeecCCC-------chhHHHHHHHhhh
Q psy159 132 FRHRFP-SIYRGDL-------SEEEEVLQWLITQ 157 (285)
Q Consensus 132 ~~~g~~-~~y~g~~-------~~~~~l~~fi~~~ 157 (285)
|++|+. ..+.|.. +. ++|.+++.+.
T Consensus 87 ~~~G~~v~~~~G~~~~~~~~~~~-~~l~~~l~~~ 119 (135)
T 2dbc_A 87 YKNGQIEGKFIGIIECGGINLKL-EELEWKLSEV 119 (135)
T ss_dssp ESSSSCSEEEESTTTTTCTTCCH-HHHHHHHHHH
T ss_pred EECCEEEEEEEeEEeeCCCcCCH-HHHHHHHHHc
Confidence 999976 3466653 34 3788888765
No 142
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.64 E-value=4.3e-15 Score=107.99 Aligned_cols=83 Identities=14% Similarity=0.294 Sum_probs=74.0
Q ss_pred cccHHHHHHHHHh----CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEE
Q psy159 165 LITRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 165 ~~~~~~~~~~~~~----~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~ 237 (285)
..+.++|++.+.+ +++++|.||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||++++
T Consensus 7 i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 85 (112)
T 1ep7_A 7 IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITAMPTFHVY 85 (112)
T ss_dssp ECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCBSSEEEEE
T ss_pred ecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCcccEEEEE
Confidence 3467889998775 89999999999999999999999999999986 6889888 57889999999999999999
Q ss_pred eCCeEE-EEecC
Q psy159 238 RNGNPL-IFEGE 248 (285)
Q Consensus 238 ~~g~~~-~y~g~ 248 (285)
++|+.+ .+.|.
T Consensus 86 ~~G~~~~~~~G~ 97 (112)
T 1ep7_A 86 KDGVKADDLVGA 97 (112)
T ss_dssp ETTEEEEEEESC
T ss_pred ECCeEEEEEcCC
Confidence 999876 67786
No 143
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.64 E-value=1.7e-15 Score=114.45 Aligned_cols=89 Identities=21% Similarity=0.414 Sum_probs=78.3
Q ss_pred cccccccHHHHHHHHH------------hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHh
Q psy159 161 DRIELITRVMLETMVE------------ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKR 225 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~------------~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~ 225 (285)
..+..++.++|++.+. ++++++|+||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHH
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHH
Confidence 3456788899988765 367899999999999999999999999999986 6888888 67889999
Q ss_pred cCCcccCeEEEE-eCCeEEEEecCCc
Q psy159 226 YSIKTFPALVYF-RNGNPLIFEGENK 250 (285)
Q Consensus 226 ~~v~~~Ptl~~~-~~g~~~~y~g~~~ 250 (285)
|+|.++||++++ ++|+.+.+.|..+
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~~~~G~~~ 113 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPEMAQGAMP 113 (136)
T ss_dssp TTCCSSCEEEEECSSSCCEEEESCCC
T ss_pred cCCCCCCEEEEECCCCcEEEEeCCCC
Confidence 999999999999 8999888889875
No 144
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.64 E-value=2.4e-15 Score=108.46 Aligned_cols=87 Identities=21% Similarity=0.423 Sum_probs=76.5
Q ss_pred cccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 163 IELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 163 v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
+..++.++|++.+ +++++++|.||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++||+++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 4567889998865 5588999999999999999999999999999986 6888888 678899999999999999999
Q ss_pred CCeEE-EEecCCc
Q psy159 239 NGNPL-IFEGENK 250 (285)
Q Consensus 239 ~g~~~-~y~g~~~ 250 (285)
+|+.+ .+.|..+
T Consensus 82 ~G~~~~~~~G~~~ 94 (107)
T 1dby_A 82 GGKKCETIIGAVP 94 (107)
T ss_dssp SSSEEEEEESCCC
T ss_pred CCEEEEEEeCCCC
Confidence 99876 6788775
No 145
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.64 E-value=1.4e-15 Score=114.51 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=81.0
Q ss_pred cceeecC-hhHHHHHHhc--CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeE
Q psy159 56 NEIEEVN-RRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 129 (285)
Q Consensus 56 ~~v~~l~-~~~f~~~~~~--~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl 129 (285)
+.+.+++ .++|+.++.+ +++++|.||++||++|+.+.|.++++++.+ ++.++.+| +..++++|+|.++||+
T Consensus 20 ~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 96 (133)
T 3cxg_A 20 SIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKALPTF 96 (133)
T ss_dssp EEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCCCCEE
Confidence 3477776 5899988865 468999999999999999999999998877 47777776 7789999999999999
Q ss_pred EEEc--ccc--c-eeecCCCchhHHHHHHHhhhcc
Q psy159 130 VYFR--HRF--P-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 130 ~~~~--~g~--~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
++|+ +|+ . ..+.|. +.+ +|.+++.+.+.
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-~~~-~l~~~l~~~l~ 129 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-NQN-DIEKAFQKYCL 129 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-CHH-HHHHHHHHHSE
T ss_pred EEEEecCCCeEEEEEEcCC-CHH-HHHHHHHHHHH
Confidence 9996 776 3 457777 554 89999887653
No 146
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.64 E-value=2.8e-15 Score=113.56 Aligned_cols=99 Identities=11% Similarity=0.224 Sum_probs=81.7
Q ss_pred ceeec-ChhHHHHHHh----cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCe
Q psy159 57 EIEEV-NRRMLDKLLE----ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 128 (285)
Q Consensus 57 ~v~~l-~~~~f~~~~~----~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Pt 128 (285)
.+..+ +.++|++.+. .+++++|.||++||++|+.+.|.++++++.+. ++.++.+| ++.++++|+|.++||
T Consensus 25 ~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt 102 (139)
T 3d22_A 25 NVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDELSDFSASWEIKATPT 102 (139)
T ss_dssp TCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCEESE
T ss_pred cEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcccHHHHHHcCCCcccE
Confidence 34555 6899998873 47899999999999999999999999999885 36777665 788999999999999
Q ss_pred EEEEccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 129 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 129 l~~~~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
++++++|+. ..+.|. +.+ ++.+++.+...
T Consensus 103 ~~~~~~G~~~~~~~G~-~~~-~l~~~l~~~~~ 132 (139)
T 3d22_A 103 FFFLRDGQQVDKLVGA-NKP-ELHKKITAILD 132 (139)
T ss_dssp EEEEETTEEEEEEESC-CHH-HHHHHHHHHHH
T ss_pred EEEEcCCeEEEEEeCC-CHH-HHHHHHHHHhc
Confidence 999988887 457777 554 79998887654
No 147
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.63 E-value=2.4e-15 Score=109.37 Aligned_cols=89 Identities=25% Similarity=0.446 Sum_probs=77.3
Q ss_pred cccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 161 DRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
+.+..++.++|++.+ +++++++|.||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++||+++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 83 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDENPGTAAKYGVMSIPTLNV 83 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCCHHHHHhCCCCcccEEEE
Confidence 345678888887754 5688999999999999999999999999999976 6888888 6788999999999999999
Q ss_pred EeCCeEE-EEecCCc
Q psy159 237 FRNGNPL-IFEGENK 250 (285)
Q Consensus 237 ~~~g~~~-~y~g~~~ 250 (285)
+++|+.+ .+.|..+
T Consensus 84 ~~~G~~~~~~~G~~~ 98 (112)
T 1t00_A 84 YQGGEVAKTIVGAKP 98 (112)
T ss_dssp EETTEEEEEEESCCC
T ss_pred EeCCEEEEEEeCCCC
Confidence 9999876 6788775
No 148
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.63 E-value=2.9e-15 Score=109.29 Aligned_cols=89 Identities=24% Similarity=0.380 Sum_probs=78.1
Q ss_pred cccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 161 DRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
+.+..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+ ++.|+.+ .++.++++|+|.++|++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPNPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTCHHHHHHTTCCSSSEEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCCHHHHHHcCCCceeEEEE
Confidence 345678899998774 5688999999999999999999999999999986 5888888 6788999999999999999
Q ss_pred EeCCeEE-EEecCCc
Q psy159 237 FRNGNPL-IFEGENK 250 (285)
Q Consensus 237 ~~~g~~~-~y~g~~~ 250 (285)
+++|+.+ .+.|..+
T Consensus 86 ~~~G~~~~~~~g~~~ 100 (115)
T 1thx_A 86 VKGEQILDSTEGVIS 100 (115)
T ss_dssp EETTEEEEEEESCCC
T ss_pred EcCCEEEEEecCCCC
Confidence 9999876 6888775
No 149
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.63 E-value=3.3e-15 Score=114.70 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=70.5
Q ss_pred cccHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeC
Q psy159 165 LITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 165 ~~~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~ 239 (285)
..+.++|++.+. ++++++|.|||+||++|+.+.|.++++++++.+ .+.|+.+ .++.++++|+|.++||++++++
T Consensus 8 i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~-~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 86 (149)
T 3gix_A 8 LTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK-MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFN 86 (149)
T ss_dssp ECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT-TEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCcCHHHHHHcCCCccCeEEEEEC
Confidence 457788998875 489999999999999999999999999999986 5888888 6888999999999999999999
Q ss_pred CeEE
Q psy159 240 GNPL 243 (285)
Q Consensus 240 g~~~ 243 (285)
|+.+
T Consensus 87 G~~v 90 (149)
T 3gix_A 87 GQHM 90 (149)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 9877
No 150
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.63 E-value=6e-15 Score=109.04 Aligned_cols=88 Identities=14% Similarity=0.310 Sum_probs=77.7
Q ss_pred ccccccccHHHHHHHHHh----CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccC
Q psy159 160 EDRIELITRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFP 232 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~----~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~P 232 (285)
.+.+..++.++|++.+.+ +++++|.||++||++|+.+.|.++++++++.+ +.|+.+ .++.++++|+|.++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~P 89 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELKPIAEQFSVEAMP 89 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCHHHHHHcCCCccc
Confidence 456677899999987754 78999999999999999999999999999874 888888 678899999999999
Q ss_pred eEEEEeCCeEE-EEecCC
Q psy159 233 ALVYFRNGNPL-IFEGEN 249 (285)
Q Consensus 233 tl~~~~~g~~~-~y~g~~ 249 (285)
|++++++|+.+ .+.|..
T Consensus 90 t~~~~~~G~~~~~~~G~~ 107 (122)
T 2vlu_A 90 TFLFMKEGDVKDRVVGAI 107 (122)
T ss_dssp EEEEEETTEEEEEEESSC
T ss_pred EEEEEeCCEEEEEEeCcC
Confidence 99999999876 678877
No 151
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.63 E-value=6e-15 Score=106.01 Aligned_cols=82 Identities=20% Similarity=0.448 Sum_probs=72.3
Q ss_pred cccH-HHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 165 LITR-VMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 165 ~~~~-~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
.++. ++|++.+. +++++++.||++||++|+.+.|.++++++++++ ++.++.+ .++.++++|+|.++||+++++
T Consensus 4 ~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 82 (106)
T 1xwb_A 4 QVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDECEDIAMEYNISSMPTFVFLK 82 (106)
T ss_dssp ECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccchHHHHHHcCCCcccEEEEEc
Confidence 3444 88988877 688999999999999999999999999999864 6889888 678899999999999999999
Q ss_pred CCeEE-EEec
Q psy159 239 NGNPL-IFEG 247 (285)
Q Consensus 239 ~g~~~-~y~g 247 (285)
+|+.+ .+.|
T Consensus 83 ~G~~~~~~~g 92 (106)
T 1xwb_A 83 NGVKVEEFAG 92 (106)
T ss_dssp TTEEEEEEES
T ss_pred CCcEEEEEcC
Confidence 99876 6778
No 152
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=9e-16 Score=116.08 Aligned_cols=91 Identities=16% Similarity=0.306 Sum_probs=79.2
Q ss_pred ccccccccHHHHHHHHHhCC--eEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCc-----
Q psy159 160 EDRIELITRVMLETMVEETQ--YLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIK----- 229 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~~--~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~----- 229 (285)
++.+..++.++|++.+.+++ +++|+||++||++|+.+.|.++++++++.+.++.|+.+ .++.++++|+|.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 44567889999999887644 89999999999999999999999999997536899998 678899999999
Q ss_pred -ccCeEEEEeCCeEE-EEecCCc
Q psy159 230 -TFPALVYFRNGNPL-IFEGENK 250 (285)
Q Consensus 230 -~~Ptl~~~~~g~~~-~y~g~~~ 250 (285)
++||+++|++|+.+ .+.|.++
T Consensus 86 ~~~Pt~~~~~~G~~~~~~~G~~~ 108 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAMRRPQIDK 108 (137)
T ss_dssp SCSSEEEEESSSSEEEEESCBCS
T ss_pred CCCCEEEEEECCEEEEEecCcCc
Confidence 99999999999876 6778665
No 153
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.63 E-value=2.7e-15 Score=109.08 Aligned_cols=87 Identities=14% Similarity=0.295 Sum_probs=75.6
Q ss_pred cccccccHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE----cChHHHHhcCCcccCeE
Q psy159 161 DRIELITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI----QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i----~~~~~~~~~~v~~~Ptl 234 (285)
+.+..++.++|++.+. .+++++|.||++||++|+.+.|.++++++++.+ +.|+.+ .+..++++|+|.++||+
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~~~~~~~~~v~~~Pt~ 82 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRVVPTF 82 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSBSSEE
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcchHHHHHHcCCCeeeEE
Confidence 4566788899999887 478999999999999999999999999999874 888888 36789999999999999
Q ss_pred EEEeCCeEE-EEecCC
Q psy159 235 VYFRNGNPL-IFEGEN 249 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~~ 249 (285)
+++++|+.+ .+.|..
T Consensus 83 ~~~~~G~~~~~~~G~~ 98 (111)
T 2pu9_C 83 KILKENSVVGEVTGAK 98 (111)
T ss_dssp EEESSSSEEEEEESSC
T ss_pred EEEeCCcEEEEEcCCC
Confidence 999999876 677764
No 154
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.62 E-value=3.2e-15 Score=107.28 Aligned_cols=87 Identities=22% Similarity=0.444 Sum_probs=75.8
Q ss_pred cccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 163 IELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 163 v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
+..++.++|++.+ .++++++|.||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++|++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 80 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchHHHHHhCCCCcccEEEEEe
Confidence 3467888888865 4578999999999999999999999999999986 6888888 678899999999999999999
Q ss_pred CCeEE-EEecCCc
Q psy159 239 NGNPL-IFEGENK 250 (285)
Q Consensus 239 ~g~~~-~y~g~~~ 250 (285)
+|+.+ .+.|..+
T Consensus 81 ~g~~~~~~~G~~~ 93 (105)
T 1fb6_A 81 NGERKESIIGAVP 93 (105)
T ss_dssp TTEEEEEEEECCC
T ss_pred CCeEEEEEecCCC
Confidence 99876 6788775
No 155
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.62 E-value=1e-14 Score=112.47 Aligned_cols=85 Identities=21% Similarity=0.437 Sum_probs=74.2
Q ss_pred ccccccHHHHHHHHHh--CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 162 RIELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~--~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
.+...+.++|++.+.+ +++++|+||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++|++++
T Consensus 14 v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 91 (153)
T 2wz9_A 14 VEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGVPEVSEKYEISSVPTFLF 91 (153)
T ss_dssp SEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCCHHHHHHcCCCCCCEEEE
Confidence 3434457899999887 8999999999999999999999999999985 5889888 6788999999999999999
Q ss_pred EeCCeEE-EEecC
Q psy159 237 FRNGNPL-IFEGE 248 (285)
Q Consensus 237 ~~~g~~~-~y~g~ 248 (285)
|++|+.+ .+.|.
T Consensus 92 ~~~G~~~~~~~G~ 104 (153)
T 2wz9_A 92 FKNSQKIDRLDGA 104 (153)
T ss_dssp EETTEEEEEEESS
T ss_pred EECCEEEEEEeCC
Confidence 9999877 56674
No 156
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.62 E-value=1.5e-15 Score=113.54 Aligned_cols=88 Identities=25% Similarity=0.394 Sum_probs=77.1
Q ss_pred ccccccHHHHHHH-HHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEE
Q psy159 162 RIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 162 ~v~~~~~~~~~~~-~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~ 237 (285)
.+..++.++|++. +.++++++|+||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||+++|
T Consensus 23 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 23 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred ccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4567788899865 45689999999999999999999999999999986 6889888 57789999999999999999
Q ss_pred eCCeEE-EEecCCc
Q psy159 238 RNGNPL-IFEGENK 250 (285)
Q Consensus 238 ~~g~~~-~y~g~~~ 250 (285)
++|+.+ .+.|..+
T Consensus 102 ~~G~~~~~~~G~~~ 115 (128)
T 2o8v_B 102 KNGEVAATKVGALS 115 (128)
T ss_dssp ETTEEEEEEESCCC
T ss_pred eCCEEEEEEcCCCC
Confidence 999876 6888775
No 157
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.62 E-value=4.9e-15 Score=111.54 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=86.8
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCC--CCeEEEE
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTK--LPAVVYF 132 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~--~Ptl~~~ 132 (285)
+.++|.++|++++.++.+++|.|||+ |++|+.+.|.++++|+++++. +.|+.+| ++.++++|||.+ .||+++|
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~ 85 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ 85 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCCSSSSSEEEEE
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHHHHHHcCCCcccCCEEEEE
Confidence 88999999999988888999999999 899999999999999999654 8888887 678999999999 9999999
Q ss_pred cc--ccceeec--CCCchhHHHHHHHhhhcc
Q psy159 133 RH--RFPSIYR--GDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 133 ~~--g~~~~y~--g~~~~~~~l~~fi~~~~~ 159 (285)
++ |+.+.+. |..+.+ .|.+|+.+.+.
T Consensus 86 ~~~~g~~~~~~~~g~~~~~-~l~~fi~~~l~ 115 (133)
T 2djk_A 86 EVAKNQKFPFDQEKEITFE-AIKAFVDDFVA 115 (133)
T ss_dssp CTTTCCBCCCCSSSCCCHH-HHHHHHHHHHH
T ss_pred ecCcCcccCCCCccccCHH-HHHHHHHHHHc
Confidence 97 7666654 888875 89999988664
No 158
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.61 E-value=1e-15 Score=114.37 Aligned_cols=84 Identities=17% Similarity=0.383 Sum_probs=71.7
Q ss_pred ccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeCCeE
Q psy159 166 ITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNP 242 (285)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~~ 242 (285)
.+.+.++....++++++|.||++||++|+.+.|.++++++++++ ++.++.+ .++.++++|+|.++||++++++|+.
T Consensus 30 ~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~ 108 (128)
T 3ul3_B 30 NGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTM 108 (128)
T ss_dssp CCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEE
Confidence 33333444455689999999999999999999999999999985 6889888 7889999999999999999999987
Q ss_pred E-EEecCCc
Q psy159 243 L-IFEGENK 250 (285)
Q Consensus 243 ~-~y~g~~~ 250 (285)
+ .+.|.++
T Consensus 109 ~~~~~G~~~ 117 (128)
T 3ul3_B 109 LARKDHFVS 117 (128)
T ss_dssp EEEESSCCC
T ss_pred EEEecCCCC
Confidence 7 6778775
No 159
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.61 E-value=5.5e-15 Score=109.59 Aligned_cols=88 Identities=15% Similarity=0.343 Sum_probs=76.1
Q ss_pred ccccccccHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE----cChHHHHhcCCcccCe
Q psy159 160 EDRIELITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI----QDPQLAKRYSIKTFPA 233 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i----~~~~~~~~~~v~~~Pt 233 (285)
.+.+..++.++|++.+. ++++++|.||++||++|+.+.|.++++++++. ++.++.+ .++.++++|+|+++||
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCcchHHHHHHcCCCeeeE
Confidence 44566788889988876 47899999999999999999999999999987 4788888 3678999999999999
Q ss_pred EEEEeCCeEE-EEecCC
Q psy159 234 LVYFRNGNPL-IFEGEN 249 (285)
Q Consensus 234 l~~~~~g~~~-~y~g~~ 249 (285)
++++++|+.+ .+.|..
T Consensus 95 ~~~~~~G~~~~~~~G~~ 111 (124)
T 1faa_A 95 FKILKENSVVGEVTGAK 111 (124)
T ss_dssp EEEEETTEEEEEEESSC
T ss_pred EEEEeCCcEEEEEcCCC
Confidence 9999999876 677865
No 160
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.61 E-value=1.8e-15 Score=128.73 Aligned_cols=90 Identities=22% Similarity=0.450 Sum_probs=80.7
Q ss_pred ccccccccHHHHHHHHHh--CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 160 EDRIELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~--~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
.+.+..++.++|++.+.. +++++|+||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||+
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 345668899999998865 78999999999999999999999999999986 6899999 67899999999999999
Q ss_pred EEEeCCeEE-EEecCCc
Q psy159 235 VYFRNGNPL-IFEGENK 250 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~~~ 250 (285)
++|++|+.+ .|.|..+
T Consensus 85 ~~~~~G~~~~~~~g~~~ 101 (287)
T 3qou_A 85 YLFQNGQPVDGFQGPQP 101 (287)
T ss_dssp EEEETTEEEEEEESCCC
T ss_pred EEEECCEEEEEeeCCCC
Confidence 999999877 6888875
No 161
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.61 E-value=6.9e-15 Score=111.98 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=69.6
Q ss_pred cccHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeC
Q psy159 165 LITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 165 ~~~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~ 239 (285)
..+.++|+..+. ++++++|.|||+||++|+.+.|.++++++++.+ ++.|+.+ .+++++++|+|.++||+++|++
T Consensus 8 i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~ 86 (142)
T 1qgv_A 8 LHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPDFNKMYELYDPCTVMFFFR 86 (142)
T ss_dssp CCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTSSCSCSSCEEEEEET
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHHHHHHcCCCCCCEEEEEEC
Confidence 346788987654 488999999999999999999999999999975 6889888 6778999999999999999999
Q ss_pred CeEEE
Q psy159 240 GNPLI 244 (285)
Q Consensus 240 g~~~~ 244 (285)
|+.+.
T Consensus 87 G~~v~ 91 (142)
T 1qgv_A 87 NKHIM 91 (142)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 98773
No 162
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=1.2e-15 Score=114.20 Aligned_cols=99 Identities=17% Similarity=0.317 Sum_probs=81.8
Q ss_pred cccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 161 DRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
+.+..++.++|+..+ .++++++|+||++||++|+.+.|.++++++++.+ .+.|+.+ .+..++++|+|.++||+++
T Consensus 17 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 95 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTIKI 95 (130)
T ss_dssp SSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEEEE
T ss_pred CCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEEEE
Confidence 456678889998854 5688999999999999999999999999999986 5888888 6788999999999999999
Q ss_pred EeCCe--EEEEecCCccchhHHHHHhhh
Q psy159 237 FRNGN--PLIFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 237 ~~~g~--~~~y~g~~~~e~~~~~~~~~~ 262 (285)
|++|+ ...|.|.++.+ .+..++.+
T Consensus 96 ~~~~~~~~~~~~G~~~~~--~l~~~l~~ 121 (130)
T 2dml_A 96 FGANKNKPEDYQGGRTGE--AIVDAALS 121 (130)
T ss_dssp ESSCTTSCEECCSCCSHH--HHHHHHHH
T ss_pred EeCCCCeEEEeecCCCHH--HHHHHHHH
Confidence 98765 45888977533 34555543
No 163
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.61 E-value=7e-15 Score=108.37 Aligned_cols=89 Identities=20% Similarity=0.453 Sum_probs=77.7
Q ss_pred cccccccHHHHHHH-HHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 161 DRIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 161 ~~v~~~~~~~~~~~-~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
..+..++.++|+.. +.++++++|.||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||+++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 90 (121)
T 2i1u_A 12 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPETARNFQVVSIPTLIL 90 (121)
T ss_dssp CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhcCCCcCCEEEE
Confidence 45567888888775 45688999999999999999999999999999975 6889888 6788999999999999999
Q ss_pred EeCCeEE-EEecCCc
Q psy159 237 FRNGNPL-IFEGENK 250 (285)
Q Consensus 237 ~~~g~~~-~y~g~~~ 250 (285)
+++|+.+ .+.|..+
T Consensus 91 ~~~g~~~~~~~G~~~ 105 (121)
T 2i1u_A 91 FKDGQPVKRIVGAKG 105 (121)
T ss_dssp EETTEEEEEEESCCC
T ss_pred EECCEEEEEecCCCC
Confidence 9999876 7888875
No 164
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.60 E-value=2e-15 Score=111.58 Aligned_cols=88 Identities=16% Similarity=0.236 Sum_probs=74.6
Q ss_pred ccccccccHHHHHH-HHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEE
Q psy159 160 EDRIELITRVMLET-MVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 235 (285)
Q Consensus 160 ~~~v~~~~~~~~~~-~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~ 235 (285)
++.+..++.++|++ ++.++++++|+||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||++
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 34566889999965 566788999999999999999999999999999986 6899998 678899999999999999
Q ss_pred EEeCCeEE-EEecC
Q psy159 236 YFRNGNPL-IFEGE 248 (285)
Q Consensus 236 ~~~~g~~~-~y~g~ 248 (285)
++++|..+ .+.|.
T Consensus 81 ~~~~~~~~~~~~g~ 94 (122)
T 3aps_A 81 LYQYERAKKSIWEE 94 (122)
T ss_dssp EEEEEGGGTEEEEE
T ss_pred EEeCCCccceeecc
Confidence 99765433 66664
No 165
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.60 E-value=1.5e-14 Score=107.46 Aligned_cols=85 Identities=16% Similarity=0.314 Sum_probs=73.5
Q ss_pred ccccccHHHHHHHHHh----CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 162 RIELITRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~----~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
++...+.++|++.+.. +++++|+||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++||+
T Consensus 18 v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 95 (124)
T 1xfl_A 18 VIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELKSVASDWAIQAMPTF 95 (124)
T ss_dssp CEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred EEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHHcCCCccCEE
Confidence 3344478889887764 8899999999999999999999999999987 5888888 57889999999999999
Q ss_pred EEEeCCeEE-EEecC
Q psy159 235 VYFRNGNPL-IFEGE 248 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~ 248 (285)
+++++|+.+ .+.|.
T Consensus 96 ~~~~~G~~~~~~~G~ 110 (124)
T 1xfl_A 96 MFLKEGKILDKVVGA 110 (124)
T ss_dssp EEEETTEEEEEEESC
T ss_pred EEEECCEEEEEEeCC
Confidence 999999877 67773
No 166
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.60 E-value=5e-16 Score=138.94 Aligned_cols=103 Identities=15% Similarity=0.179 Sum_probs=85.6
Q ss_pred ccceeecChhHHHHHHhcC--CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCC-------CcEEEEeC---ChhHHhhhC
Q psy159 55 KNEIEEVNRRMLDKLLEEN--EFVTVFFYETDHKDSVKVLERLEKIDGETDNM-------DITFVKMA---DPRYARKWG 122 (285)
Q Consensus 55 ~~~v~~l~~~~f~~~~~~~--~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~-------~v~~~~~~---~~~l~~~~~ 122 (285)
...|.+++.++|+.++.++ ++++|.|||+||++|+.+.|.|+++++.+... .+.++.+| ++++|++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 4569999999999987643 78999999999999999999999999998521 38888887 789999999
Q ss_pred CCCCCeEEEEcccc---ceeecCCCchhHHHHHHHhhhcc
Q psy159 123 VTKLPAVVYFRHRF---PSIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 123 i~~~Ptl~~~~~g~---~~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|.++||+++|++|. ...|.|.++.+ .| +|+.++..
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e-~L-~fI~k~l~ 139 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLE-HV-AFENSHLE 139 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEE-EE-ECSCTTCC
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHH-HH-HHHHHhcC
Confidence 99999999998654 46799988775 56 66666554
No 167
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.60 E-value=1.4e-15 Score=111.76 Aligned_cols=100 Identities=20% Similarity=0.475 Sum_probs=82.5
Q ss_pred ccccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc--CCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 160 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDI--YGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~--~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
.+.+..++.++|++.+.++++++|+||++||++|+.+.|.++++++.+++ .++.++.+ .++.++++|+|.++|++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 34566889999999998999999999999999999999999999999874 24778888 56789999999999999
Q ss_pred EEEeCCeE---EEEecCCccchhHHHHHhh
Q psy159 235 VYFRNGNP---LIFEGENKILKGTYIGTYI 261 (285)
Q Consensus 235 ~~~~~g~~---~~y~g~~~~e~~~~~~~~~ 261 (285)
+++++|+. ..|.|.++. ..+..++.
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~--~~l~~~l~ 113 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREA--DDIVNWLK 113 (120)
T ss_dssp EEEESSCSSSCEECCCCSSH--HHHHHHHH
T ss_pred EEEeCCCcCCcccccCccCH--HHHHHHHH
Confidence 99999974 578887753 23444443
No 168
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.60 E-value=5.5e-15 Score=121.12 Aligned_cols=100 Identities=24% Similarity=0.353 Sum_probs=83.9
Q ss_pred ccccccccHHHHHHH-HHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEE
Q psy159 160 EDRIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 235 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~-~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~ 235 (285)
...+..++.++|++. ++++++++|.||++||++|+.+.|.++++++++++ ++.|+.+ .++.++++|+|.++||++
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 89 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLL 89 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCTTTGGGGTCCSBSEEE
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCCHHHHHHcCCCcCCEEE
Confidence 355678899999885 56789999999999999999999999999999986 6888888 677899999999999999
Q ss_pred EEeCCeEE-EEecCCccchhHHHHHhhh
Q psy159 236 YFRNGNPL-IFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 236 ~~~~g~~~-~y~g~~~~e~~~~~~~~~~ 262 (285)
++++|+.+ .+.|.++.+ .+..++.+
T Consensus 90 ~~~~G~~~~~~~G~~~~~--~l~~~l~~ 115 (222)
T 3dxb_A 90 LFKNGEVAATKVGALSKG--QLKEFLDA 115 (222)
T ss_dssp EEETTEEEEEEESCCCHH--HHHHHHHH
T ss_pred EEECCeEEEEeccccChH--HHHHHHHh
Confidence 99999877 788887532 23444443
No 169
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.60 E-value=9.3e-15 Score=110.84 Aligned_cols=89 Identities=25% Similarity=0.446 Sum_probs=65.6
Q ss_pred cccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEE
Q psy159 161 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~ 237 (285)
+.+..++.++|+..+.+++.++|+||++||++|+.+.|.++++++++.+ ++.|+.+ .++.++++|+|.++||+++|
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCHHHHHHCCCCccCEEEEE
Confidence 4455778889988876655599999999999999999999999999986 6999998 67889999999999999999
Q ss_pred eCCeEE-EEecCCc
Q psy159 238 RNGNPL-IFEGENK 250 (285)
Q Consensus 238 ~~g~~~-~y~g~~~ 250 (285)
++|+.+ .+.|..+
T Consensus 112 ~~G~~~~~~~G~~~ 125 (140)
T 1v98_A 112 RRGAPVATWVGASP 125 (140)
T ss_dssp ETTEEEEEEESCCC
T ss_pred eCCcEEEEEeCCCC
Confidence 999876 6888775
No 170
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.60 E-value=1.2e-14 Score=106.74 Aligned_cols=82 Identities=21% Similarity=0.454 Sum_probs=71.4
Q ss_pred cccccH-HHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 163 IELITR-VMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 163 v~~~~~-~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
+..++. ++|++.+. ++++++|.||++||++|+.+.|.++++++++ ++.++.+ .++.++++|+|.++||+++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 334555 88988887 5889999999999999999999999999887 4788888 6788999999999999999
Q ss_pred EeCCeEE-EEec
Q psy159 237 FRNGNPL-IFEG 247 (285)
Q Consensus 237 ~~~g~~~-~y~g 247 (285)
+++|+.+ .+.|
T Consensus 92 ~~~G~~~~~~~G 103 (117)
T 2xc2_A 92 IKNGEKVGDVVG 103 (117)
T ss_dssp EETTEEEEEEES
T ss_pred EeCCcEEEEEeC
Confidence 9999876 6778
No 171
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.59 E-value=1.2e-14 Score=106.95 Aligned_cols=82 Identities=21% Similarity=0.413 Sum_probs=71.9
Q ss_pred cHHHHHHH-HHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeC---
Q psy159 167 TRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN--- 239 (285)
Q Consensus 167 ~~~~~~~~-~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~--- 239 (285)
+.++|++. .+++++++|.||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++||+++|++
T Consensus 11 ~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~~~~ 88 (118)
T 2f51_A 11 THEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANK--DVTFIKVDVDKNGNAADAYGVSSIPALFFVKKEGN 88 (118)
T ss_dssp CHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETT
T ss_pred CHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CeEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCCC
Confidence 67888854 5568899999999999999999999999999983 6889888 6788999999999999999988
Q ss_pred -CeEE-EEecCCc
Q psy159 240 -GNPL-IFEGENK 250 (285)
Q Consensus 240 -g~~~-~y~g~~~ 250 (285)
|+.+ ++.|...
T Consensus 89 ~G~~~~~~~G~~~ 101 (118)
T 2f51_A 89 EIKTLDQFVGADV 101 (118)
T ss_dssp EEEEEEEEESCCH
T ss_pred cceEEEeecCCCH
Confidence 8776 7888775
No 172
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.59 E-value=2.9e-15 Score=117.28 Aligned_cols=81 Identities=16% Similarity=0.303 Sum_probs=71.6
Q ss_pred ccccccccHHHHHHHHHh--CCeEEEEEEC-------CCChhhHHHHHHHHHHHhhcC-----cCCeEEEEE---cChHH
Q psy159 160 EDRIELITRVMLETMVEE--TQYLAVYFYK-------LNCNICDQILEGLEKVDDECD-----IYGIHMVKI---QDPQL 222 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~--~~~~~v~F~a-------~~c~~c~~~~~~~~~la~~~~-----~~~i~~~~i---~~~~~ 222 (285)
.+.+..+++++|++++.. +.+++|+||| +||++|+.+.|.|+++|+++. + ++.|+++ +++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~-~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS-LNLFFTVDVNEVPQL 95 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEEETTTCHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC-CEEEEEEECccCHHH
Confidence 445668999999998764 5579999999 499999999999999999987 4 7999999 78999
Q ss_pred HHhcCCcccCeEEEEeCCe
Q psy159 223 AKRYSIKTFPALVYFRNGN 241 (285)
Q Consensus 223 ~~~~~v~~~Ptl~~~~~g~ 241 (285)
+++|+|+++||+++|++|.
T Consensus 96 a~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 96 VKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp HHHTTCCSSCEEEEECCCC
T ss_pred HHHcCCCCCCEEEEEcCCC
Confidence 9999999999999999874
No 173
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.59 E-value=2.8e-15 Score=122.16 Aligned_cols=101 Identities=15% Similarity=0.202 Sum_probs=82.4
Q ss_pred ccceeec-ChhHHHHHHhcC---CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC--ChhHHhhhCCCCCCe
Q psy159 55 KNEIEEV-NRRMLDKLLEEN---EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--DPRYARKWGVTKLPA 128 (285)
Q Consensus 55 ~~~v~~l-~~~~f~~~~~~~---~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--~~~l~~~~~i~~~Pt 128 (285)
.+.|.++ +.++|...+.+. ++++|.||++||++|+.+.|.|.++|+.+. ++.|+.+| ++.++.+|+|.++||
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRASNTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHHHHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECCcHHHHHHCCCCCCCE
Confidence 3457888 899999988653 789999999999999999999999999985 47888777 567899999999999
Q ss_pred EEEEccccc-eeecCCCch------hHHHHHHHhhh
Q psy159 129 VVYFRHRFP-SIYRGDLSE------EEEVLQWLITQ 157 (285)
Q Consensus 129 l~~~~~g~~-~~y~g~~~~------~~~l~~fi~~~ 157 (285)
+++|++|+. ..+.|.... .+.|..|+.+.
T Consensus 176 l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999976 457776553 12677777654
No 174
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.59 E-value=2.2e-14 Score=102.64 Aligned_cols=79 Identities=25% Similarity=0.577 Sum_probs=70.7
Q ss_pred cHHHHHHHHH--hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeCCe
Q psy159 167 TRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGN 241 (285)
Q Consensus 167 ~~~~~~~~~~--~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~ 241 (285)
+.++|++.+. ++++++|.||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++|+++++++|+
T Consensus 6 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 83 (104)
T 2vim_A 6 TAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGK 83 (104)
T ss_dssp SHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCccccEEEEEeCCc
Confidence 4488999887 58899999999999999999999999999986 5888888 678899999999999999999998
Q ss_pred EE-EEec
Q psy159 242 PL-IFEG 247 (285)
Q Consensus 242 ~~-~y~g 247 (285)
.+ .+.|
T Consensus 84 ~~~~~~G 90 (104)
T 2vim_A 84 EVDRFSG 90 (104)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 76 6777
No 175
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.59 E-value=7.6e-15 Score=108.52 Aligned_cols=88 Identities=19% Similarity=0.379 Sum_probs=76.3
Q ss_pred cccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEE
Q psy159 161 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~ 237 (285)
......+.++|++.+.++++++|.||++||++|+.+.|.++++++++.+.++.|+.+ .++.++++|+|.++||++++
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~ 95 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFF 95 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEE
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEE
Confidence 344555678999999888999999999999999999999999999887523888888 67889999999999999999
Q ss_pred eCCeEE-EEecC
Q psy159 238 RNGNPL-IFEGE 248 (285)
Q Consensus 238 ~~g~~~-~y~g~ 248 (285)
++|+.+ .+.|.
T Consensus 96 ~~G~~~~~~~G~ 107 (121)
T 2j23_A 96 KNGQKIDTVVGA 107 (121)
T ss_dssp ETTEEEEEEESS
T ss_pred ECCeEEeeEcCC
Confidence 999876 77887
No 176
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.58 E-value=3.4e-14 Score=104.12 Aligned_cols=85 Identities=16% Similarity=0.371 Sum_probs=73.3
Q ss_pred ccccccHHHHHHHHHh----CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 162 RIELITRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~----~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
.+...+.++|++.+.. +++++|.||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++|++
T Consensus 8 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 85 (118)
T 2vm1_A 8 VIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEAMPTF 85 (118)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSBSEE
T ss_pred eEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCcCcEE
Confidence 4444578889887764 8899999999999999999999999999987 5888888 67889999999999999
Q ss_pred EEEeCCeEE-EEecC
Q psy159 235 VYFRNGNPL-IFEGE 248 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~ 248 (285)
+++++|+.+ .+.|.
T Consensus 86 ~~~~~g~~~~~~~g~ 100 (118)
T 2vm1_A 86 LFIKDGEKVDSVVGG 100 (118)
T ss_dssp EEEETTEEEEEEESC
T ss_pred EEEeCCeEEEEecCC
Confidence 999999877 66773
No 177
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.58 E-value=4e-14 Score=102.92 Aligned_cols=84 Identities=15% Similarity=0.337 Sum_probs=73.2
Q ss_pred ccccccHHHHHHHHHh----CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 162 RIELITRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~----~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
.+...+.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. ++.|+.+ .++.++++|+|.++|++
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 83 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEAMPTF 83 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSSTTEE
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCcccEE
Confidence 3444578899988765 7899999999999999999999999999987 5888888 67889999999999999
Q ss_pred EEEeCCeEE-EEec
Q psy159 235 VYFRNGNPL-IFEG 247 (285)
Q Consensus 235 ~~~~~g~~~-~y~g 247 (285)
+++++|+.+ .+.|
T Consensus 84 ~~~~~G~~~~~~~g 97 (113)
T 1ti3_A 84 IFLKDGKLVDKTVG 97 (113)
T ss_dssp EEEETTEEEEEEEC
T ss_pred EEEeCCEEEEEEec
Confidence 999999877 5677
No 178
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.58 E-value=1.4e-14 Score=109.13 Aligned_cols=96 Identities=14% Similarity=0.153 Sum_probs=79.2
Q ss_pred ecChhHHHHHHhc--CCcEEEEEeCCCChhHHHHHHHH---HhHHhhcCCCCcEEEEeC-------ChhHHhhhCCCCCC
Q psy159 60 EVNRRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA-------DPRYARKWGVTKLP 127 (285)
Q Consensus 60 ~l~~~~f~~~~~~--~~~~lv~Fya~~c~~C~~~~~~~---~~~a~~~~~~~v~~~~~~-------~~~l~~~~~i~~~P 127 (285)
..+.++++..+.+ +++++|.||++||++|+++.|.+ .++++.+++ +.++.+| ...++++|+|.++|
T Consensus 16 ~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~~~l~~~~~v~~~P 93 (134)
T 2fwh_A 16 IKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALLKHLNVLGLP 93 (134)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHHHHTTCCSSS
T ss_pred ecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchHHHHHHHcCCCCCC
Confidence 4467888887754 78999999999999999999999 889888864 6666655 36789999999999
Q ss_pred eEEEE-ccccce---eecCCCchhHHHHHHHhhhc
Q psy159 128 AVVYF-RHRFPS---IYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 128 tl~~~-~~g~~~---~y~g~~~~~~~l~~fi~~~~ 158 (285)
+++++ ++|+.+ .+.|..+.+ +|.+++....
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~-~l~~~l~~~~ 127 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAE-TFSAHLRDRQ 127 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHH-HHHHHHHHC-
T ss_pred EEEEECCCCCEeeeeeeeeccCHH-HHHHHHHhcC
Confidence 99999 778874 689988875 8999987654
No 179
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.58 E-value=5.3e-13 Score=111.24 Aligned_cols=211 Identities=9% Similarity=0.053 Sum_probs=146.7
Q ss_pred eeecC-hhHHHHHHhc-CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEccc
Q psy159 58 IEEVN-RRMLDKLLEE-NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRHR 135 (285)
Q Consensus 58 v~~l~-~~~f~~~~~~-~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~~g 135 (285)
+.+++ .+++++++.+ ++.++|-|++++|+ ...+.|.++|+.+++. +.|+.+.+.++++++++.+ |+|++|+++
T Consensus 8 v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~---~~~~~F~~~A~~lr~~-~~F~~t~~~~v~~~~~v~~-p~ivlfk~~ 82 (250)
T 3ec3_A 8 SKEILTLKQVQEFLKDGDDVVILGVFQGVGD---PGYLQYQDAANTLRED-YKFHHTFSTEIAKFLKVSL-GKLVLMQPE 82 (250)
T ss_dssp SEECCCHHHHHHHHHHCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTT-CCEEEECCHHHHHHHTCCS-SEEEEECCG
T ss_pred ceecCCHHHHHHHHhcCCCeEEEEEEcCCCc---hHHHHHHHHHHhhhcC-cEEEEECcHHHHHHcCCCC-CeEEEEecc
Confidence 77884 5889999888 88999999999865 4788999999999553 8899999999999999988 999999853
Q ss_pred --------cceeecC--CCchhHHHHHHHhhhccccccccccHHHHHHHHHhCCeEEEEEECC-CC---h-hhHHHHHHH
Q psy159 136 --------FPSIYRG--DLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKL-NC---N-ICDQILEGL 200 (285)
Q Consensus 136 --------~~~~y~g--~~~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~F~a~-~c---~-~c~~~~~~~ 200 (285)
....|+| .++.+ +|.+|+..+..|-+. .++.+++.... .+++.++.|+.+ .+ . ..+.+...+
T Consensus 83 ~~~~kfde~~~~y~g~~~~~~~-~l~~fi~~~~~Plv~-e~t~~n~~~~~-~~~~l~~~~~~~d~~~~~~~~~~~~~~~~ 159 (250)
T 3ec3_A 83 KFQSKYEPRMHVMDVQGSTEAS-AIKDYVVKHALPLVG-HRKTSNDAKRY-SKRPLVVVYYSVDFSFDYRTATQFWRNKV 159 (250)
T ss_dssp GGCCTTSCSCEEEECCTTSCHH-HHHHHHHHHSSCTEE-EECTTTHHHHS-CSSSEEEEEECCCCSTTTHHHHHHHHHHH
T ss_pred hhhccccccceeccCCCCCCHH-HHHHHHHHcCCCcee-ecCccchhhhh-ccCccEEEEEecccccccchhHHHHHHHH
Confidence 3467884 66665 899999998765544 77787777665 467777777753 32 2 345578899
Q ss_pred HHHHhhcCcCCeEEEEE---cChHHHHhcCCcc--cC-eEEEEeC-CeEEEEe-cCCccchhHHHHHhhhcCCCCCCCCC
Q psy159 201 EKVDDECDIYGIHMVKI---QDPQLAKRYSIKT--FP-ALVYFRN-GNPLIFE-GENKILKGTYIGTYISTKAFSLIPFC 272 (285)
Q Consensus 201 ~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~--~P-tl~~~~~-g~~~~y~-g~~~~e~~~~~~~~~~~~~~~~~~e~ 272 (285)
+++|++++ ++.|+.+ +.....+.||+.. .| .++++.. ++.+.+. +..+ .+.+..|+.+-..=.+-|.+
T Consensus 160 ~~vAk~~k--ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t--~~~i~~Fv~~~~~Gkl~p~~ 235 (250)
T 3ec3_A 160 LEVAKDFP--EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFD--SDALREFVMAFKKGKLKPVI 235 (250)
T ss_dssp HHHHTTCT--TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCC--HHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHhhc--ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCceecCCcccCC--HHHHHHHHHHHHCCCcccee
Confidence 99999998 6999998 4566778899974 44 6666643 4444555 4444 23344444332222344445
Q ss_pred CCCCCCCc
Q psy159 273 FSEKHPGA 280 (285)
Q Consensus 273 ~~~~~~~~ 280 (285)
-|+.-|..
T Consensus 236 kSepiPe~ 243 (250)
T 3ec3_A 236 KSQPVPKN 243 (250)
T ss_dssp --------
T ss_pred ecCCCCCC
Confidence 55554443
No 180
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.58 E-value=4.6e-14 Score=106.76 Aligned_cols=86 Identities=14% Similarity=0.282 Sum_probs=74.1
Q ss_pred cccccccHHHHHHHHH----hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCe
Q psy159 161 DRIELITRVMLETMVE----ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPA 233 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~----~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Pt 233 (285)
..+...+.++|++.+. .+++++|.||++||++|+.+.|.++++++++. ++.|+.+ .++.++++|+|.++||
T Consensus 25 ~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt 102 (139)
T 3d22_A 25 NVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDELSDFSASWEIKATPT 102 (139)
T ss_dssp TCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCEESE
T ss_pred cEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcccHHHHHHcCCCcccE
Confidence 3444556889988764 48899999999999999999999999999986 5888888 6788999999999999
Q ss_pred EEEEeCCeEE-EEecC
Q psy159 234 LVYFRNGNPL-IFEGE 248 (285)
Q Consensus 234 l~~~~~g~~~-~y~g~ 248 (285)
++++++|+.+ .+.|.
T Consensus 103 ~~~~~~G~~~~~~~G~ 118 (139)
T 3d22_A 103 FFFLRDGQQVDKLVGA 118 (139)
T ss_dssp EEEEETTEEEEEEESC
T ss_pred EEEEcCCeEEEEEeCC
Confidence 9999999877 67776
No 181
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.35 E-value=1.7e-16 Score=114.04 Aligned_cols=98 Identities=16% Similarity=0.303 Sum_probs=81.6
Q ss_pred eeecChhHHHHHH-hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEc
Q psy159 58 IEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 58 v~~l~~~~f~~~~-~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 133 (285)
+.+++.++|++.+ .++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+| +..++++|++.++|++++|+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDENPNTAAQYGIRSIPTLLLFK 81 (106)
Confidence 6778899998664 6678999999999999999999999999988854 36777665 67899999999999999998
Q ss_pred cccc-eeecCCCchhHHHHHHHhhh
Q psy159 134 HRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 134 ~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
+|+. ..+.|..+.+ ++.+++.+.
T Consensus 82 ~g~~~~~~~g~~~~~-~l~~~l~~~ 105 (106)
T 2yj7_A 82 NGQVVDRLVGAQPKE-ALKERIDKH 105 (106)
Confidence 8876 4678877765 788887653
No 182
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.56 E-value=2.6e-14 Score=107.81 Aligned_cols=87 Identities=15% Similarity=0.249 Sum_probs=71.8
Q ss_pred cccccccHHHHHHHHHh---CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEcChHHHHhcCCcccCeEEEE
Q psy159 161 DRIELITRVMLETMVEE---TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRYSIKTFPALVYF 237 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~---~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~~v~~~Ptl~~~ 237 (285)
+.+..++.++|++.+.+ +++++|+||++||++|+.+.|.++++++++. ++.|+.++.....++|+|.++||+++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~~~~~i~~~Pt~~~~ 87 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCIEHYHDNCLPTIFVY 87 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSCSSCCSSCCSEEEEE
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCcccCCCCCCCEEEEE
Confidence 34556689999987764 3689999999999999999999999999986 589999933333478999999999999
Q ss_pred eCCeEE-EEecCC
Q psy159 238 RNGNPL-IFEGEN 249 (285)
Q Consensus 238 ~~g~~~-~y~g~~ 249 (285)
++|+.+ .+.|..
T Consensus 88 ~~G~~v~~~~G~~ 100 (135)
T 2dbc_A 88 KNGQIEGKFIGII 100 (135)
T ss_dssp SSSSCSEEEESTT
T ss_pred ECCEEEEEEEeEE
Confidence 999866 677754
No 183
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=9.9e-15 Score=109.09 Aligned_cols=101 Identities=13% Similarity=0.120 Sum_probs=79.8
Q ss_pred eeecChhHHHHHH----hcCCcEEEEEeCCCChhHHHHHHHH---HhHHhhcCCCCcEEEEeC-----ChhHHhhhCCCC
Q psy159 58 IEEVNRRMLDKLL----EENEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA-----DPRYARKWGVTK 125 (285)
Q Consensus 58 v~~l~~~~f~~~~----~~~~~~lv~Fya~~c~~C~~~~~~~---~~~a~~~~~~~v~~~~~~-----~~~l~~~~~i~~ 125 (285)
...++..+|++.+ .++++++|.||++||++|+.+.|.+ +++++.++. ++.++.+| +..++++|+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~ 86 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELRKKYGVHA 86 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHHHHTTCCS
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHHHHcCCCC
Confidence 3445677777766 3678999999999999999999999 677666532 36677665 357999999999
Q ss_pred CCeEEEE-ccccc-eeecCCCchhHHHHHHHhhhccc
Q psy159 126 LPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQKTE 160 (285)
Q Consensus 126 ~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~~~ 160 (285)
+|+++++ ++|+. ..+.|..+.+ ++.+++.+...+
T Consensus 87 ~Pt~~~~d~~G~~~~~~~G~~~~~-~l~~~l~~~~~~ 122 (130)
T 2kuc_A 87 YPTLLFINSSGEVVYRLVGAEDAP-ELLKKVKLGVES 122 (130)
T ss_dssp SCEEEEECTTSCEEEEEESCCCHH-HHHHHHHHHHSC
T ss_pred CCEEEEECCCCcEEEEecCCCCHH-HHHHHHHHHHHh
Confidence 9999999 57876 4688888775 899999887654
No 184
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.56 E-value=2.4e-14 Score=107.96 Aligned_cols=86 Identities=17% Similarity=0.351 Sum_probs=73.2
Q ss_pred ccccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE------------cChHHHHhcC
Q psy159 160 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI------------QDPQLAKRYS 227 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------~~~~~~~~~~ 227 (285)
++.+..++.++|++.+.+ +++|+||++||++|+.+.|.++++++++. +.|+.+ .++.++++|+
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKAG 89 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHcC
Confidence 345667899999998876 99999999999999999999999999876 455555 2466899999
Q ss_pred CcccCeEEEEeCCeEE-EEecCCc
Q psy159 228 IKTFPALVYFRNGNPL-IFEGENK 250 (285)
Q Consensus 228 v~~~Ptl~~~~~g~~~-~y~g~~~ 250 (285)
|.++||++++++|+.+ .+.|..+
T Consensus 90 v~~~Pt~~~~~~G~~v~~~~G~~~ 113 (135)
T 3emx_A 90 VEGTPTLVFYKEGRIVDKLVGATP 113 (135)
T ss_dssp CCSSSEEEEEETTEEEEEEESCCC
T ss_pred CceeCeEEEEcCCEEEEEEeCCCC
Confidence 9999999999999877 7788875
No 185
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.56 E-value=2.5e-15 Score=111.61 Aligned_cols=88 Identities=26% Similarity=0.436 Sum_probs=71.3
Q ss_pred ccccccHHHHHHH-HHhCCeEEEEEECCCCh--------------hhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHH
Q psy159 162 RIELITRVMLETM-VEETQYLAVYFYKLNCN--------------ICDQILEGLEKVDDECDIYGIHMVKI---QDPQLA 223 (285)
Q Consensus 162 ~v~~~~~~~~~~~-~~~~~~~~v~F~a~~c~--------------~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~ 223 (285)
.+..++.++|++. ++++++++|+||++||+ +|+.+.|.++++++++.+ ++.++.+ .++.++
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTA 82 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTTTG
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHH
Confidence 4557788889865 46689999999999999 999999999999999886 6888888 678899
Q ss_pred HhcCCcccCeEEEEeCCeEE-EEecCCc
Q psy159 224 KRYSIKTFPALVYFRNGNPL-IFEGENK 250 (285)
Q Consensus 224 ~~~~v~~~Ptl~~~~~g~~~-~y~g~~~ 250 (285)
++|+|.++||++++++|+.+ .+.|.++
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~ 110 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALS 110 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCC
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCC
Confidence 99999999999999999876 7888875
No 186
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.56 E-value=7e-15 Score=106.11 Aligned_cols=76 Identities=12% Similarity=0.035 Sum_probs=62.1
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-------ChhHHhhhCCCCCCeEEEEccccceeecCCCc
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-------DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLS 145 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-------~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~ 145 (285)
++..+|.|||+||++|+.+.|.|+++++.++ .+.++ ++++|++|+|.++||+++ +|+ .|.|.++
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~--~~~G~~~ 82 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR--TYTGVRS 82 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE--EEESCCC
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-----EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE--EecCCCC
Confidence 4566899999999999999999999997764 33333 578999999999999877 775 4889988
Q ss_pred hhHHHHHHHhhhc
Q psy159 146 EEEEVLQWLITQK 158 (285)
Q Consensus 146 ~~~~l~~fi~~~~ 158 (285)
.+ +|.+|+.-..
T Consensus 83 ~~-~l~~~~~~~~ 94 (106)
T 3kp8_A 83 LE-ALAVASGYPL 94 (106)
T ss_dssp HH-HHHHHHTCCC
T ss_pred HH-HHHHHhCCcc
Confidence 86 8999886443
No 187
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.55 E-value=1.9e-15 Score=114.93 Aligned_cols=87 Identities=10% Similarity=0.158 Sum_probs=63.0
Q ss_pred ccccccHHHHHHHHHhCCeEEEEEECCC--ChhhHHHHHHHHHHHhhcCcCCeE--EEEE---cChHHHHhcCCcccCeE
Q psy159 162 RIELITRVMLETMVEETQYLAVYFYKLN--CNICDQILEGLEKVDDECDIYGIH--MVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~~~v~F~a~~--c~~c~~~~~~~~~la~~~~~~~i~--~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
.+..++.++|++++.+++.++|+|+++| |++|+.+.|.++++++++ + ++. |+++ .+++++++|+|.++||+
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHHHHHHHTTTCCSSSEE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCCHHHHHhcCCCcCCeE
Confidence 4557788999999888778889999887 999999999999999999 5 678 9999 57789999999999999
Q ss_pred EEEeCCeEE-EEecCCc
Q psy159 235 VYFRNGNPL-IFEGENK 250 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~~~ 250 (285)
++|++|+.+ ++.|.++
T Consensus 96 ~~fk~G~~v~~~~G~~~ 112 (142)
T 2es7_A 96 LVFTDGKLRGALSGIHP 112 (142)
T ss_dssp EEESCC----CEESCCC
T ss_pred EEEeCCEEEEEEeCCCC
Confidence 999999876 7889775
No 188
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.55 E-value=2.5e-14 Score=106.12 Aligned_cols=97 Identities=11% Similarity=0.158 Sum_probs=76.9
Q ss_pred ceeecChhHHHHHHhc--CCcEEEEEeCC-------CChhHHHHHHHHHhHHhhcCCCCcEEEE--e-------C-ChhH
Q psy159 57 EIEEVNRRMLDKLLEE--NEFVTVFFYET-------DHKDSVKVLERLEKIDGETDNMDITFVK--M-------A-DPRY 117 (285)
Q Consensus 57 ~v~~l~~~~f~~~~~~--~~~~lv~Fya~-------~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~-------~-~~~l 117 (285)
.+...+.++|++.+.+ +++++|.|||+ ||++|+.+.|.++++++.+.+ ++.++. + + +..+
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTTCHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchhHHH
Confidence 3667789999998876 78999999999 999999999999999998853 366665 4 3 5679
Q ss_pred HhhhCCCCCCeEEEEcccccee-ecCCCchhHHHHHHHhh
Q psy159 118 ARKWGVTKLPAVVYFRHRFPSI-YRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 118 ~~~~~i~~~Ptl~~~~~g~~~~-y~g~~~~~~~l~~fi~~ 156 (285)
+++|+|.++||+++|+++.... +.| .+.+ .|.+|+.+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~-~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKLVESEC-LQAN-LVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEEEGGGG-GCHH-HHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCceEecccc-CCHH-HHHHHHhc
Confidence 9999999999999998865433 443 3333 68888754
No 189
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.55 E-value=4.8e-15 Score=111.28 Aligned_cols=101 Identities=15% Similarity=0.355 Sum_probs=79.3
Q ss_pred ccccccccHHHHHHHHH-hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc-CCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 160 EDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~-~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
.+.+..++.++|+..+. ++++++|+||++||++|+.+.|.|+++++++.+ .++.|+.+ .+..++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEE
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEE
Confidence 45667788888887765 488999999999999999999999999999974 25889988 46678889999999999
Q ss_pred EEEeCCe---EEEEecC-CccchhHHHHHhhh
Q psy159 235 VYFRNGN---PLIFEGE-NKILKGTYIGTYIS 262 (285)
Q Consensus 235 ~~~~~g~---~~~y~g~-~~~e~~~~~~~~~~ 262 (285)
+++++|+ .+.|.|. ++. + .+..|+.+
T Consensus 86 ~~~~~g~~~~~~~~~gg~~~~-~-~l~~~l~~ 115 (133)
T 2dj3_A 86 YFAPSGDKKNPIKFEGGNRDL-E-HLSKFIDE 115 (133)
T ss_dssp EEECTTCTTSCEECCSSCCST-T-HHHHHHHH
T ss_pred EEEeCCCcccceEecCCCcCH-H-HHHHHHHH
Confidence 9998875 3467744 542 2 34555443
No 190
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.54 E-value=2.7e-14 Score=116.34 Aligned_cols=87 Identities=20% Similarity=0.327 Sum_probs=75.0
Q ss_pred ccccc-cHHHHHHHHHhC---CeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--cChHHHHhcCCcccCeEE
Q psy159 162 RIELI-TRVMLETMVEET---QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--QDPQLAKRYSIKTFPALV 235 (285)
Q Consensus 162 ~v~~~-~~~~~~~~~~~~---~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~~~~~~~~~~v~~~Ptl~ 235 (285)
.+..+ +.++|.+.+.+. ++++|.||++||++|+.+.|.|.+++.++. ++.|+.+ +++.++.+|+|.++||++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~~~~l~~~~~i~~~PTl~ 177 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRASNTGAGDRFSSDVLPTLL 177 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHHHHTCSTTSCGGGCSEEE
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECCcHHHHHHCCCCCCCEEE
Confidence 34555 899999987653 799999999999999999999999999986 5899999 555688899999999999
Q ss_pred EEeCCeEE-EEecCCc
Q psy159 236 YFRNGNPL-IFEGENK 250 (285)
Q Consensus 236 ~~~~g~~~-~y~g~~~ 250 (285)
+|++|+.+ .+.|...
T Consensus 178 ~~~~G~~v~~~~G~~~ 193 (217)
T 2trc_P 178 VYKGGELISNFISVAE 193 (217)
T ss_dssp EEETTEEEEEETTGGG
T ss_pred EEECCEEEEEEeCCcc
Confidence 99999876 7777654
No 191
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.54 E-value=3.9e-14 Score=106.56 Aligned_cols=115 Identities=18% Similarity=0.089 Sum_probs=90.5
Q ss_pred ccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcc--cCeEEE
Q psy159 162 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKT--FPALVY 236 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~--~Ptl~~ 236 (285)
.+..++.++|++.+.+..+++++||++ |++|+.+.|.++++|+++++ ++.|+++ +++.+++.|||++ +||+++
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i 84 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAFGAHAGNLNLKTDKFPAFAI 84 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTTGGGTTTTTCCSSSSSEEEE
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHhHHHHHHcCCCcccCCEEEE
Confidence 355789999998888888999999999 89999999999999999997 7999999 6788999999999 999999
Q ss_pred EeC--CeEEEEe--cCCccchhHHHHHhhhcCCCCCCCCCCCCCCCCc
Q psy159 237 FRN--GNPLIFE--GENKILKGTYIGTYISTKAFSLIPFCFSEKHPGA 280 (285)
Q Consensus 237 ~~~--g~~~~y~--g~~~~e~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 280 (285)
+++ |+.+.+. |..+.+ .+..|+.+...-.+-|.+-||.-|..
T Consensus 85 ~~~~~g~~~~~~~~g~~~~~--~l~~fi~~~l~Gkl~p~~kSe~iP~~ 130 (133)
T 2djk_A 85 QEVAKNQKFPFDQEKEITFE--AIKAFVDDFVAGKIEPSIKSEPIPEK 130 (133)
T ss_dssp ECTTTCCBCCCCSSSCCCHH--HHHHHHHHHHHTCCCCSSCCCCCCTT
T ss_pred EecCcCcccCCCCccccCHH--HHHHHHHHHHcCCcCccccCCCCCCc
Confidence 997 7665554 766532 24444433333345566777777765
No 192
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.54 E-value=3.8e-14 Score=101.66 Aligned_cols=93 Identities=19% Similarity=0.212 Sum_probs=73.0
Q ss_pred eeec-ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-Chh----HHhhhCCCC-CCe
Q psy159 58 IEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-DPR----YARKWGVTK-LPA 128 (285)
Q Consensus 58 v~~l-~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-~~~----l~~~~~i~~-~Pt 128 (285)
...+ |.++|+++++++++++|+|+|.|||.|+.+.|.++++++. . ++.+..+ + +++ ++.++||++ .|+
T Consensus 8 ~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq 84 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIVQQERDLSDYIAKKTNVKHESPQ 84 (112)
T ss_dssp EEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEGGGGHHHHHHHHHHHTCCCCSSE
T ss_pred eeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEeecCchhhHHHHHHhCCccCCCe
Confidence 4455 6788999998899999999999999999999999999874 3 3555544 4 433 899999995 999
Q ss_pred EEEEccccce--eecCCCchhHHHHHHH
Q psy159 129 VVYFRHRFPS--IYRGDLSEEEEVLQWL 154 (285)
Q Consensus 129 l~~~~~g~~~--~y~g~~~~~~~l~~fi 154 (285)
+++|++|+.+ .-.+..+.. .|.+.+
T Consensus 85 ~il~k~G~~v~~~SH~~I~~~-~l~~~~ 111 (112)
T 3iv4_A 85 AFYFVNGEMVWNRDHGDINVS-SLAQAE 111 (112)
T ss_dssp EEEEETTEEEEEEEGGGCSHH-HHHHHT
T ss_pred EEEEECCEEEEEeeccccCHH-HHHHhh
Confidence 9999999873 245566654 565543
No 193
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.54 E-value=1.6e-14 Score=119.36 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=80.3
Q ss_pred ccceeec-ChhHHHHHHhc---CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC--ChhHHhhhCCCCCCe
Q psy159 55 KNEIEEV-NRRMLDKLLEE---NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--DPRYARKWGVTKLPA 128 (285)
Q Consensus 55 ~~~v~~l-~~~~f~~~~~~---~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--~~~l~~~~~i~~~Pt 128 (285)
.+.|.++ +.++|...+.. +++++|.|||+||++|+.+.|.|.++|+.+.+ +.|+.++ ...++.+|+|.++||
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~~~l~~~~~I~~~PT 188 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASNTGAGDRFSSDVLPT 188 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHHHCCTTSSCTTTCSE
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCcHHHHHHCCCCCCCE
Confidence 4467888 79999998853 67899999999999999999999999999853 7888877 455889999999999
Q ss_pred EEEEccccce-eecCCC-------chhHHHHHHHhhh
Q psy159 129 VVYFRHRFPS-IYRGDL-------SEEEEVLQWLITQ 157 (285)
Q Consensus 129 l~~~~~g~~~-~y~g~~-------~~~~~l~~fi~~~ 157 (285)
+++|++|+.+ .+.|.. +. +.|..|+.+.
T Consensus 189 ll~~~~G~~v~~~vG~~~~~g~~~~~-e~Le~~L~~~ 224 (245)
T 1a0r_P 189 LLVYKGGELLSNFISVTEQLAEEFFT-GDVESFLNEY 224 (245)
T ss_dssp EEEEETTEEEEEETTGGGGSCTTCCH-HHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccccccccH-HHHHHHHHHc
Confidence 9999998763 344432 22 2677777665
No 194
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.54 E-value=2.4e-15 Score=112.35 Aligned_cols=100 Identities=11% Similarity=0.186 Sum_probs=82.1
Q ss_pred cceeec-ChhHHHHHHhc----CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCC
Q psy159 56 NEIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLP 127 (285)
Q Consensus 56 ~~v~~l-~~~~f~~~~~~----~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~P 127 (285)
+.+.++ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. ++.++.+| ++.++++|+|.++|
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~P 91 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEAMP 91 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCSSC
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCccc
Confidence 346667 56899988764 7899999999999999999999999999886 46677666 67899999999999
Q ss_pred eEEEEccccce-eecCCCchhHHHHHHHhhhcc
Q psy159 128 AVVYFRHRFPS-IYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 128 tl~~~~~g~~~-~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|++++++|+.+ .+.| .+.+ ++.+++.+...
T Consensus 92 t~~~~~~g~~~~~~~g-~~~~-~l~~~l~~~~~ 122 (130)
T 1wmj_A 92 TFLFIKDGAEADKVVG-ARKD-DLQNTIVKHVG 122 (130)
T ss_dssp CCCBCTTTTCCBCCCT-TCTT-THHHHHHHHTS
T ss_pred eEEEEeCCeEEEEEeC-CCHH-HHHHHHHHHHh
Confidence 99999888874 4667 4554 78899887654
No 195
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.53 E-value=5.4e-15 Score=109.07 Aligned_cols=100 Identities=16% Similarity=0.386 Sum_probs=77.8
Q ss_pred ccccccccHHHHHHHH-HhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc----CCeEEEEE--cChHHHHhcCCcccC
Q psy159 160 EDRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDI----YGIHMVKI--QDPQLAKRYSIKTFP 232 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~-~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~----~~i~~~~i--~~~~~~~~~~v~~~P 232 (285)
.+.+..++.++|++.+ .++++++|+||++||++|+.+.|.|+++++++.+ .++.|+.+ +...+++ +|.++|
T Consensus 6 ~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~--~v~~~P 83 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD--EIQGFP 83 (121)
T ss_dssp SCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS--CCSSSS
T ss_pred CCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc--ccCcCC
Confidence 3456678888898875 5688999999999999999999999999999974 25889888 3334665 999999
Q ss_pred eEEEEeCC-e--EEEEecCCccchhHHHHHhhhc
Q psy159 233 ALVYFRNG-N--PLIFEGENKILKGTYIGTYIST 263 (285)
Q Consensus 233 tl~~~~~g-~--~~~y~g~~~~e~~~~~~~~~~~ 263 (285)
|+++|++| + ...|.|.++. +.+..|+.+.
T Consensus 84 t~~~~~~~~~~~~~~~~G~~~~--~~l~~~i~~~ 115 (121)
T 2djj_A 84 TIKLYPAGAKGQPVTYSGSRTV--EDLIKFIAEN 115 (121)
T ss_dssp EEEEECSSCTTSCCCCCCCSCH--HHHHHHHHHT
T ss_pred eEEEEeCcCCCCceEecCCCCH--HHHHHHHHhc
Confidence 99999887 4 4588887753 3345555443
No 196
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.53 E-value=6.3e-14 Score=100.50 Aligned_cols=77 Identities=25% Similarity=0.370 Sum_probs=66.8
Q ss_pred ccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChH----HHHhcCCcc-cCeEE
Q psy159 164 ELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQ----LAKRYSIKT-FPALV 235 (285)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~----~~~~~~v~~-~Ptl~ 235 (285)
+..+.++|+++++++++++|+|+|.||++|+.+.|.|++++.. + ++.++.+ ++++ ++.+++|++ .|+++
T Consensus 10 ~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~-~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~i 86 (112)
T 3iv4_A 10 KLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--R-DMDGYYLIVQQERDLSDYIAKKTNVKHESPQAF 86 (112)
T ss_dssp ECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H-TCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEE
T ss_pred ecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C-CceEEEEEeecCchhhHHHHHHhCCccCCCeEE
Confidence 3457788999999999999999999999999999999999875 2 5777777 4544 899999995 99999
Q ss_pred EEeCCeEE
Q psy159 236 YFRNGNPL 243 (285)
Q Consensus 236 ~~~~g~~~ 243 (285)
+|++|+.+
T Consensus 87 l~k~G~~v 94 (112)
T 3iv4_A 87 YFVNGEMV 94 (112)
T ss_dssp EEETTEEE
T ss_pred EEECCEEE
Confidence 99999977
No 197
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.51 E-value=6.2e-14 Score=105.21 Aligned_cols=87 Identities=15% Similarity=0.187 Sum_probs=67.3
Q ss_pred HHHhcCCcEEEEEeCCCChhHHHHHHHHH--hHHhhcCCCCcEEEEe-----C-ChhHHhhhCC---CCCCeEEEE-ccc
Q psy159 68 KLLEENEFVTVFFYETDHKDSVKVLERLE--KIDGETDNMDITFVKM-----A-DPRYARKWGV---TKLPAVVYF-RHR 135 (285)
Q Consensus 68 ~~~~~~~~~lv~Fya~~c~~C~~~~~~~~--~~a~~~~~~~v~~~~~-----~-~~~l~~~~~i---~~~Ptl~~~-~~g 135 (285)
....++++++|.||++||++|+.+.|.|. ++++.+++ ++.++.+ + +..++++|+| .++||+++| .+|
T Consensus 24 ~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G 102 (133)
T 3fk8_A 24 AGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDG 102 (133)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTS
T ss_pred HHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCC
Confidence 33456899999999999999999999999 88888732 2555544 3 6789999999 999999999 678
Q ss_pred cc-eeecC-------CCchhHHHHHHHhh
Q psy159 136 FP-SIYRG-------DLSEEEEVLQWLIT 156 (285)
Q Consensus 136 ~~-~~y~g-------~~~~~~~l~~fi~~ 156 (285)
+. ..+.| ..+.+ ++.+|+..
T Consensus 103 ~~~~~~~g~~~~~~~~~~~~-~l~~~l~~ 130 (133)
T 3fk8_A 103 KVRYTTKGGELANARKMSDQ-GIYDFFAK 130 (133)
T ss_dssp CEEEECCSCTTTTGGGSCHH-HHHHHHHH
T ss_pred CEEEEecCCcccccccCCHH-HHHHHHHH
Confidence 76 34555 33443 77777764
No 198
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.51 E-value=8.3e-14 Score=104.72 Aligned_cols=84 Identities=23% Similarity=0.392 Sum_probs=69.7
Q ss_pred ccccccHHHHHHHHHh--CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEE
Q psy159 162 RIELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 236 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~--~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~ 236 (285)
.+...+.+++++.+.+ +++++|.||++||++|+.+.|.++++++++ ++.|+.+ .+..++++|+|.++||+++
T Consensus 22 v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 98 (133)
T 3cxg_A 22 YIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKALPTFEF 98 (133)
T ss_dssp EEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred EEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCCCCEEEE
Confidence 3333445888888876 469999999999999999999999998876 3778887 6788999999999999999
Q ss_pred Ee--CCe--EE-EEecC
Q psy159 237 FR--NGN--PL-IFEGE 248 (285)
Q Consensus 237 ~~--~g~--~~-~y~g~ 248 (285)
|+ +|+ .+ .+.|.
T Consensus 99 ~~~~~g~g~~~~~~~G~ 115 (133)
T 3cxg_A 99 YFNLNNEWVLVHTVEGA 115 (133)
T ss_dssp EEEETTEEEEEEEEESC
T ss_pred EEecCCCeEEEEEEcCC
Confidence 97 887 44 67776
No 199
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.50 E-value=3.6e-14 Score=105.47 Aligned_cols=86 Identities=19% Similarity=0.279 Sum_probs=69.7
Q ss_pred HHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc-----ChHHHHhcCCcccCeEEEEe-CCeEE-EEe
Q psy159 174 MVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ-----DPQLAKRYSIKTFPALVYFR-NGNPL-IFE 246 (285)
Q Consensus 174 ~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~-----~~~~~~~~~v~~~Ptl~~~~-~g~~~-~y~ 246 (285)
...++++++|.||++||++|+.+.|.++++++++.+ ++.++.++ +..++++|+|.++|++++++ +|+.+ .+.
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~ 100 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQ 100 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEE
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEec
Confidence 344578999999999999999999999999999974 68888774 57799999999999999998 88866 678
Q ss_pred cCCccchhHHHHHhhh
Q psy159 247 GENKILKGTYIGTYIS 262 (285)
Q Consensus 247 g~~~~e~~~~~~~~~~ 262 (285)
|..+.+ .+..++.+
T Consensus 101 G~~~~~--~l~~~l~~ 114 (126)
T 2l57_A 101 GLMRKN--NIETILNS 114 (126)
T ss_dssp SCCCHH--HHHHHHHH
T ss_pred CCCCHH--HHHHHHHH
Confidence 877532 24444443
No 200
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.50 E-value=1.7e-13 Score=112.99 Aligned_cols=97 Identities=13% Similarity=0.359 Sum_probs=82.2
Q ss_pred cccccccHHHHHHHHHhCCeEEEEEEC--CCChhhHHHHHHHHHHHhhcCc-CCeEEEEEc--------ChHHHHhcCCc
Q psy159 161 DRIELITRVMLETMVEETQYLAVYFYK--LNCNICDQILEGLEKVDDECDI-YGIHMVKIQ--------DPQLAKRYSIK 229 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~v~F~a--~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i~--------~~~~~~~~~v~ 229 (285)
+.+..++..+|++.+.++++++|.||| |||+ +.|.|++++..+.+ .++.|+.++ ++++|++|+|+
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 445678999999988888999999999 9999 99999999999974 259999995 68899999999
Q ss_pred --ccCeEEEEeCCe---EEEEecCCccchhHHHHHhhhc
Q psy159 230 --TFPALVYFRNGN---PLIFEGENKILKGTYIGTYIST 263 (285)
Q Consensus 230 --~~Ptl~~~~~g~---~~~y~g~~~~e~~~~~~~~~~~ 263 (285)
++||+++|++|+ +..|.|.++. ..+..|+.+.
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~--~~L~~fi~~~ 117 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKV--GAIQRWLKGQ 117 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCH--HHHHHHHHHT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCH--HHHHHHHHHh
Confidence 999999999998 6799998863 3356665544
No 201
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.50 E-value=5.4e-14 Score=96.80 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=66.5
Q ss_pred cEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHH
Q psy159 75 FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVL 151 (285)
Q Consensus 75 ~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~ 151 (285)
..+|.||++||++|+++.|.++++++.+++ ++.++.+| +++++++|||.++||+++ +|+. .+.|..+.+ ++.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~-~l~ 77 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-RFVGAPSRE-ELF 77 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-EEECSSCCH-HHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-EEccCCCHH-HHH
Confidence 357999999999999999999999998863 36666665 678999999999999988 7776 788887775 899
Q ss_pred HHHhhhc
Q psy159 152 QWLITQK 158 (285)
Q Consensus 152 ~fi~~~~ 158 (285)
+++.+.+
T Consensus 78 ~~l~~~l 84 (85)
T 1nho_A 78 EAINDEM 84 (85)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9987653
No 202
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.50 E-value=3.8e-14 Score=97.61 Aligned_cols=79 Identities=13% Similarity=0.244 Sum_probs=66.6
Q ss_pred CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHH
Q psy159 74 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEV 150 (285)
Q Consensus 74 ~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l 150 (285)
...+|.||++||++|+++.|.++++++.+++ ++.++.+| +++++++||+.++||+++ +|+. .+.|..+.+ ++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~-~l 77 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-EFIGAPTKE-AL 77 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-ECCSSSSSH-HH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-eeecCCCHH-HH
Confidence 4678999999999999999999999998853 36666655 678999999999999988 7776 788887775 89
Q ss_pred HHHHhhh
Q psy159 151 LQWLITQ 157 (285)
Q Consensus 151 ~~fi~~~ 157 (285)
.+++.+.
T Consensus 78 ~~~l~~~ 84 (85)
T 1fo5_A 78 VEAIKKR 84 (85)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988764
No 203
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.49 E-value=7.2e-14 Score=115.46 Aligned_cols=86 Identities=19% Similarity=0.299 Sum_probs=73.5
Q ss_pred ccccc-cHHHHHHHHHh---CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--cChHHHHhcCCcccCeEE
Q psy159 162 RIELI-TRVMLETMVEE---TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--QDPQLAKRYSIKTFPALV 235 (285)
Q Consensus 162 ~v~~~-~~~~~~~~~~~---~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~~~~~~~~~~v~~~Ptl~ 235 (285)
.+..+ +.++|.+.+.. +++++|.||++||++|+.+.|.|.+++.++. ++.|+.+ +.+.++.+|+|.++||++
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~~~l~~~~~I~~~PTll 190 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKASNTGAGDRFSSDVLPTLL 190 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHHHCCTTSSCTTTCSEEE
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCcHHHHHHCCCCCCCEEE
Confidence 45555 78999998853 7899999999999999999999999999997 4899999 335688899999999999
Q ss_pred EEeCCeEE-EEecCC
Q psy159 236 YFRNGNPL-IFEGEN 249 (285)
Q Consensus 236 ~~~~g~~~-~y~g~~ 249 (285)
+|++|+.+ .+.|..
T Consensus 191 ~~~~G~~v~~~vG~~ 205 (245)
T 1a0r_P 191 VYKGGELLSNFISVT 205 (245)
T ss_dssp EEETTEEEEEETTGG
T ss_pred EEECCEEEEEEeCCc
Confidence 99999876 666643
No 204
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.49 E-value=1.6e-13 Score=92.71 Aligned_cols=73 Identities=22% Similarity=0.256 Sum_probs=62.3
Q ss_pred EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEccccceeecCCC-chhHHHHHHH
Q psy159 77 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRHRFPSIYRGDL-SEEEEVLQWL 154 (285)
Q Consensus 77 lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~-~~~~~l~~fi 154 (285)
.|.||++||++|+.+.|.++++++.++. ++.++.+|+.+++++|||.++||+++ +|+.... |.. +.+ ++.+++
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~v~~~Pt~~~--~G~~~~~-G~~~~~~-~l~~~l 76 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIKEMDQILEAGLTALPGLAV--DGELKIM-GRVASKE-EIKKIL 76 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEECSHHHHHHHTCSSSSCEEE--TTEEEEC-SSCCCHH-HHHHHC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEecCHHHHHHCCCCcCCEEEE--CCEEEEc-CCCCCHH-HHHHHh
Confidence 5899999999999999999999998864 48888999999999999999999988 7776544 776 554 787775
No 205
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.48 E-value=1.4e-13 Score=114.30 Aligned_cols=81 Identities=15% Similarity=0.319 Sum_probs=70.9
Q ss_pred ccccccccHHHHHHHHHh-CCeEEEEEECCCChhhHHHHHHHHHHHhhcCc--CCeEEEEE-----cChHHHHhcCCccc
Q psy159 160 EDRIELITRVMLETMVEE-TQYLAVYFYKLNCNICDQILEGLEKVDDECDI--YGIHMVKI-----QDPQLAKRYSIKTF 231 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~-~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~--~~i~~~~i-----~~~~~~~~~~v~~~ 231 (285)
.+.+..++.++|++.+.+ +++++|+|||+||++|+.+.|.|+++++++.+ ..+.|+.+ .+..++++|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 456778899999987654 69999999999999999999999999999985 25888888 36889999999999
Q ss_pred CeEEEEeCC
Q psy159 232 PALVYFRNG 240 (285)
Q Consensus 232 Ptl~~~~~g 240 (285)
||+++|++|
T Consensus 91 Pt~~~~~~g 99 (244)
T 3q6o_A 91 PTVRFFXAF 99 (244)
T ss_dssp SEEEEECTT
T ss_pred CEEEEEeCC
Confidence 999999974
No 206
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.46 E-value=3.5e-13 Score=111.44 Aligned_cols=98 Identities=15% Similarity=0.251 Sum_probs=81.7
Q ss_pred ccccccccHHHHHHHHHhCCeEEEEEE--CCCChhhHHHHHHHHHHHhhcCc--CCeEEEEE---c-----ChHHHHhcC
Q psy159 160 EDRIELITRVMLETMVEETQYLAVYFY--KLNCNICDQILEGLEKVDDECDI--YGIHMVKI---Q-----DPQLAKRYS 227 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~v~F~--a~~c~~c~~~~~~~~~la~~~~~--~~i~~~~i---~-----~~~~~~~~~ 227 (285)
++.+..++..+|++++.++++++|.|| ||||+ +.|.|+++|.++.+ .++.|+++ + ++++|++|+
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 455668899999998888899999999 99998 99999999999853 26999999 4 689999999
Q ss_pred Cc--ccCeEEEEeCCe---EEEE--ecCCccchhHHHHHhhhcC
Q psy159 228 IK--TFPALVYFRNGN---PLIF--EGENKILKGTYIGTYISTK 264 (285)
Q Consensus 228 v~--~~Ptl~~~~~g~---~~~y--~g~~~~e~~~~~~~~~~~~ 264 (285)
|+ ++||+++|+ |+ +..| .|.++. +.+..|+.+..
T Consensus 91 V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~--~~L~~fi~~~~ 131 (248)
T 2c0g_A 91 VDDKNFPSIFLFK-GNADEYVQLPSHVDVTL--DNLKAFVSANT 131 (248)
T ss_dssp CCTTSCCEEEEES-SSSSSEEECCTTSCCCH--HHHHHHHHHHS
T ss_pred CCcCCCCeEEEEe-CCcCcceeecccCCCCH--HHHHHHHHHhh
Confidence 99 999999999 87 5689 898863 33566665543
No 207
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.46 E-value=2.9e-13 Score=101.78 Aligned_cols=84 Identities=17% Similarity=0.253 Sum_probs=71.0
Q ss_pred cccHHHHHHHHHh--CCeEEEEEECCCChhhHHHHHHH---HHHHhhcCcCCeEEEEEc-------ChHHHHhcCCcccC
Q psy159 165 LITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKIQ-------DPQLAKRYSIKTFP 232 (285)
Q Consensus 165 ~~~~~~~~~~~~~--~~~~~v~F~a~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i~-------~~~~~~~~~v~~~P 232 (285)
..+.++++..+.+ +++++|.||++||++|+.+.+.+ .++++.+++ +.++.++ ...++++|+|.++|
T Consensus 16 ~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~~~l~~~~~v~~~P 93 (134)
T 2fwh_A 16 IKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALLKHLNVLGLP 93 (134)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHHHHTTCCSSS
T ss_pred ecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchHHHHHHHcCCCCCC
Confidence 5567778777765 78999999999999999999998 899988874 7888772 35689999999999
Q ss_pred eEEEE-eCCeEE---EEecCCc
Q psy159 233 ALVYF-RNGNPL---IFEGENK 250 (285)
Q Consensus 233 tl~~~-~~g~~~---~y~g~~~ 250 (285)
+++++ ++|+.+ ++.|..+
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~ 115 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMD 115 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCC
T ss_pred EEEEECCCCCEeeeeeeeeccC
Confidence 99999 899875 6888875
No 208
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.46 E-value=1.4e-11 Score=113.25 Aligned_cols=172 Identities=15% Similarity=0.196 Sum_probs=125.4
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCCCCCeEEEEccccc--eeecCCCchhHHH
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRHRFP--SIYRGDLSEEEEV 150 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~~~Ptl~~~~~g~~--~~y~g~~~~~~~l 150 (285)
..++.+.++...|..|.++..-+++++..-.. +.+...+.. . ...|++.+.++|.. +.|.|-..-. ++
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~s~~--i~~~~~~~~------~-~~~p~~~~~~~~~~~~i~f~g~p~g~-e~ 87 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAELSDK--VTFKEDNTL------P-VRKPSFLITNPGSQQGPRFAGSPLGH-EF 87 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTTCTT--EEEEECTTS------S-SCSSEEEEECTTCCCSCEEESCCCGG-GH
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHHhCCc--eEEEEcCCc------c-cCCCEEEEecCCCcceEEEeccCcch-hH
Confidence 45666666777899999999999998765443 554332211 0 56899999987754 8899977655 68
Q ss_pred HHHHhhhcccc-ccccccHHHHHHHHHh-CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHh
Q psy159 151 LQWLITQKTED-RIELITRVMLETMVEE-TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKR 225 (285)
Q Consensus 151 ~~fi~~~~~~~-~v~~~~~~~~~~~~~~-~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~ 225 (285)
..|+....+-+ .-..++.+.++.+.+. ....++.|+++||++|+.+.|.+++++..+. ++.+..+ .+++++++
T Consensus 88 ~s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~~~~~~ 165 (521)
T 1hyu_A 88 TSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQNEITE 165 (521)
T ss_dssp HHHHHHHHHHTTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhHHHHHH
Confidence 88887755422 2235677777666443 5567888999999999999999999998876 5888887 78999999
Q ss_pred cCCcccCeEEEEeCCeEEEEecCCccchhHHHHHhh
Q psy159 226 YSIKTFPALVYFRNGNPLIFEGENKILKGTYIGTYI 261 (285)
Q Consensus 226 ~~v~~~Ptl~~~~~g~~~~y~g~~~~e~~~~~~~~~ 261 (285)
|+|.++|++++ +|+.+ ..|..+. ..+..|+.
T Consensus 166 ~~i~svPt~~i--~g~~~-~~G~~~~--~~l~~~l~ 196 (521)
T 1hyu_A 166 RNVMGVPAVFV--NGKEF-GQGRMTL--TEIVAKVD 196 (521)
T ss_dssp TTCCSSSEEEE--TTEEE-EESCCCH--HHHHHHHC
T ss_pred hCCCccCEEEE--CCEEE-ecCCCCH--HHHHHHHh
Confidence 99999999977 88865 3476542 23455543
No 209
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.44 E-value=4.9e-13 Score=100.23 Aligned_cols=73 Identities=21% Similarity=0.260 Sum_probs=62.8
Q ss_pred HHHhCCeEEEEEECCCChhhHHHHHHHH--HHHhhcCcCCeEEEEE------cChHHHHhcCC---cccCeEEEE-eCCe
Q psy159 174 MVEETQYLAVYFYKLNCNICDQILEGLE--KVDDECDIYGIHMVKI------QDPQLAKRYSI---KTFPALVYF-RNGN 241 (285)
Q Consensus 174 ~~~~~~~~~v~F~a~~c~~c~~~~~~~~--~la~~~~~~~i~~~~i------~~~~~~~~~~v---~~~Ptl~~~-~~g~ 241 (285)
...++++++|+||++||++|+.+.|.++ +++..+.+ ++.++.+ .+..++++|+| .++||++++ ++|+
T Consensus 25 ~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~ 103 (133)
T 3fk8_A 25 GKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGK 103 (133)
T ss_dssp HHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSC
T ss_pred HHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCC
Confidence 3456899999999999999999999999 99988864 5778777 35789999999 999999999 7898
Q ss_pred EE-EEec
Q psy159 242 PL-IFEG 247 (285)
Q Consensus 242 ~~-~y~g 247 (285)
.+ .+.|
T Consensus 104 ~~~~~~g 110 (133)
T 3fk8_A 104 VRYTTKG 110 (133)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 76 5566
No 210
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.15 E-value=1e-14 Score=104.59 Aligned_cols=87 Identities=24% Similarity=0.473 Sum_probs=73.5
Q ss_pred cccccHHHHHHH-HHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEe
Q psy159 163 IELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 163 v~~~~~~~~~~~-~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~ 238 (285)
+..++.+++++. +.++++++|.||++||++|+.+.|.++++++++.+ ++.++.+ .++.++++|+|.++|++++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDENPNTAAQYGIRSIPTLLLFK 81 (106)
Confidence 346777888765 46688999999999999999999999999999885 5778777 577899999999999999999
Q ss_pred CCeEE-EEecCCc
Q psy159 239 NGNPL-IFEGENK 250 (285)
Q Consensus 239 ~g~~~-~y~g~~~ 250 (285)
+|+.+ .+.|..+
T Consensus 82 ~g~~~~~~~g~~~ 94 (106)
T 2yj7_A 82 NGQVVDRLVGAQP 94 (106)
Confidence 99865 6777664
No 211
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.42 E-value=2.6e-13 Score=106.45 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=70.0
Q ss_pred ecChhHHHHHH----hcCCcEEEEEeCCCChhHHHHHHHH---HhHHhhcCCCCcEEEEeC---ChhH------------
Q psy159 60 EVNRRMLDKLL----EENEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA---DPRY------------ 117 (285)
Q Consensus 60 ~l~~~~f~~~~----~~~~~~lv~Fya~~c~~C~~~~~~~---~~~a~~~~~~~v~~~~~~---~~~l------------ 117 (285)
..+..+|++.+ ..+++++|.|||+||++|+.+.+.+ .++.+.+++ ++.++.+| ...+
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchh
Confidence 34455565554 5689999999999999999985555 555555532 36676655 2222
Q ss_pred --------------HhhhCCCCCCeEEEE-ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 118 --------------ARKWGVTKLPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 118 --------------~~~~~i~~~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+++|+|.++||++++ ++|+. ..+.|...+.+++.+++.+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 789999999999999 56876 457788872348988887654
No 212
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.42 E-value=9.7e-13 Score=97.40 Aligned_cols=81 Identities=16% Similarity=0.220 Sum_probs=70.0
Q ss_pred ccccccHHHHHHHHHh--CCeEEEEEECC-------CChhhHHHHHHHHHHHhhcCcCCeEEEEEc----------ChHH
Q psy159 162 RIELITRVMLETMVEE--TQYLAVYFYKL-------NCNICDQILEGLEKVDDECDIYGIHMVKIQ----------DPQL 222 (285)
Q Consensus 162 ~v~~~~~~~~~~~~~~--~~~~~v~F~a~-------~c~~c~~~~~~~~~la~~~~~~~i~~~~i~----------~~~~ 222 (285)
.+...+.++|++.+.+ +++++|.||++ ||++|+.+.|.++++++++.+ ++.|+.++ ++.+
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTTCHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchhHHH
Confidence 4557788999998876 88999999999 999999999999999999875 68888872 4568
Q ss_pred HHhcCCcccCeEEEEeCCeEE
Q psy159 223 AKRYSIKTFPALVYFRNGNPL 243 (285)
Q Consensus 223 ~~~~~v~~~Ptl~~~~~g~~~ 243 (285)
+++|+|.++||+++|++|..+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~ 105 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKL 105 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEE
T ss_pred HHHCCCCeeCEEEEEcCCceE
Confidence 999999999999999887644
No 213
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.41 E-value=5e-13 Score=104.17 Aligned_cols=94 Identities=7% Similarity=0.074 Sum_probs=71.5
Q ss_pred hHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhc-CCCCcEEEEeC-Chh-HHhhhCC--CCCCeEEEE-ccccc
Q psy159 64 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGET-DNMDITFVKMA-DPR-YARKWGV--TKLPAVVYF-RHRFP 137 (285)
Q Consensus 64 ~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~-~~~~v~~~~~~-~~~-l~~~~~i--~~~Ptl~~~-~~g~~ 137 (285)
++++.....+++++|.|||+||++|+.+.|.|.++++.. .+..+..+.++ +.. ++.+|++ .++||+++| .+|+.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 667777778899999999999999999999999987665 33446666665 344 7888988 669999999 67876
Q ss_pred e-eecCC----------CchhHHHHHHHhhhc
Q psy159 138 S-IYRGD----------LSEEEEVLQWLITQK 158 (285)
Q Consensus 138 ~-~y~g~----------~~~~~~l~~fi~~~~ 158 (285)
+ .+.|. .+. +++++++.+.+
T Consensus 117 ~~~~~G~~~~~~~~~~~~~~-~~l~~~l~~~l 147 (164)
T 1sen_A 117 HPEIINENGNPSYKYFYVSA-EQVVQGMKEAQ 147 (164)
T ss_dssp CTTCCCTTSCTTSTTCCCSH-HHHHHHHHHHH
T ss_pred EEEEeCCCCccchhcccCCH-HHHHHHHHHHH
Confidence 3 45563 344 47888887654
No 214
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.41 E-value=1.4e-13 Score=99.96 Aligned_cols=86 Identities=15% Similarity=0.085 Sum_probs=63.1
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhc---CCCCcEEEEeCC---hhHHhhhCCCCCCeEEEEccccc-eeecCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGET---DNMDITFVKMAD---PRYARKWGVTKLPAVVYFRHRFP-SIYRGDL 144 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~---~~~~v~~~~~~~---~~l~~~~~i~~~Ptl~~~~~g~~-~~y~g~~ 144 (285)
+...+||+|||+||++|+.+.+.+....+.. ....+..+.++. ..++.+++|.+.||+++|++|+. -+..|..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 3467999999999999999987553321111 112345555552 57899999999999999999987 5688988
Q ss_pred chhHHHHHHHhhhc
Q psy159 145 SEEEEVLQWLITQK 158 (285)
Q Consensus 145 ~~~~~l~~fi~~~~ 158 (285)
..+ .+.+|+...+
T Consensus 97 ~~~-~f~~~L~~~l 109 (116)
T 3dml_A 97 GED-FFWPMLARLI 109 (116)
T ss_dssp CHH-HHHHHHHHHH
T ss_pred CHH-HHHHHHHHHH
Confidence 885 8988887654
No 215
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.40 E-value=6.3e-14 Score=104.55 Aligned_cols=84 Identities=13% Similarity=0.350 Sum_probs=71.2
Q ss_pred cccc-cHHHHHHHHHh----CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeE
Q psy159 163 IELI-TRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 234 (285)
Q Consensus 163 v~~~-~~~~~~~~~~~----~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl 234 (285)
+..+ +.++|++.+.. +++++|+||++||++|+.+.|.++++++++. ++.|+.+ .+..++++|+|.++|++
T Consensus 16 ~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 93 (130)
T 1wmj_A 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEAMPTF 93 (130)
T ss_dssp SBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCSSCCC
T ss_pred eEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCccceE
Confidence 3344 66888887764 7899999999999999999999999999987 4778888 57889999999999999
Q ss_pred EEEeCCeEE-EEecC
Q psy159 235 VYFRNGNPL-IFEGE 248 (285)
Q Consensus 235 ~~~~~g~~~-~y~g~ 248 (285)
+++++|+.+ .+.|.
T Consensus 94 ~~~~~g~~~~~~~g~ 108 (130)
T 1wmj_A 94 LFIKDGAEADKVVGA 108 (130)
T ss_dssp CBCTTTTCCBCCCTT
T ss_pred EEEeCCeEEEEEeCC
Confidence 999999866 56673
No 216
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.10 E-value=2.4e-14 Score=106.98 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=74.3
Q ss_pred hhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHH---HhHHhhcCCCCcEEEEeC-----ChhHHhhhCCCCCCeEEEE--
Q psy159 63 RRMLDKLLEENEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA-----DPRYARKWGVTKLPAVVYF-- 132 (285)
Q Consensus 63 ~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~---~~~a~~~~~~~v~~~~~~-----~~~l~~~~~i~~~Ptl~~~-- 132 (285)
.+.+......+++++|.||++||++|+.+.|.+ +++++.++. ++.++.+| ...++++|+|.++||+++|
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~ 87 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVP 87 (130)
Confidence 344555556778999999999999999999999 888887754 35666554 4679999999999999999
Q ss_pred ccccc---eeecCCCchhHHHHHHHhhhcc
Q psy159 133 RHRFP---SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 133 ~~g~~---~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
++|+. ..+.|..+.+ .+.+++.+...
T Consensus 88 ~~G~~~~~~~~~G~~~~~-~l~~~l~~~~~ 116 (130)
T 2lst_A 88 KAGAWEEVGRLFGSRPRA-EFLKELRQVCV 116 (130)
Confidence 55765 3578887765 78888877653
No 217
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.39 E-value=9e-13 Score=90.57 Aligned_cols=68 Identities=26% Similarity=0.404 Sum_probs=60.0
Q ss_pred CeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeCCeEEEEecCCc
Q psy159 179 QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 250 (285)
Q Consensus 179 ~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~ 250 (285)
.+.++.||++||++|+.+.|.++++++++.+ ++.+..+ +++.++++|+|.++|++++ +|+. .+.|..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-EFIGAPT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-ECCSSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-eeecCCC
Confidence 4678999999999999999999999999985 6888888 5678999999999999999 8887 7888764
No 218
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.39 E-value=8.7e-13 Score=98.39 Aligned_cols=83 Identities=18% Similarity=0.399 Sum_probs=66.4
Q ss_pred cHHHHHHHH----HhCCeEEEEEECCCChhhHHHHHHH---HHHHhhcCcCCeEEEEE--c---ChHHHHhcCCcccCeE
Q psy159 167 TRVMLETMV----EETQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI--Q---DPQLAKRYSIKTFPAL 234 (285)
Q Consensus 167 ~~~~~~~~~----~~~~~~~v~F~a~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i--~---~~~~~~~~~v~~~Ptl 234 (285)
+..+|++.+ .++++++|.||++||++|+.+.|.+ +.+++.+.. ++.++.+ + +..++++|+|.++|++
T Consensus 12 ~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~ 90 (130)
T 2kuc_A 12 RELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELRKKYGVHAYPTL 90 (130)
T ss_dssp BCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHHHHTTCCSSCEE
T ss_pred ccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHHHHcCCCCCCEE
Confidence 445565544 3588999999999999999999998 777766654 5777777 2 4679999999999999
Q ss_pred EEE-eCCeEE-EEecCCc
Q psy159 235 VYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 235 ~~~-~~g~~~-~y~g~~~ 250 (285)
+++ ++|+.+ .+.|..+
T Consensus 91 ~~~d~~G~~~~~~~G~~~ 108 (130)
T 2kuc_A 91 LFINSSGEVVYRLVGAED 108 (130)
T ss_dssp EEECTTSCEEEEEESCCC
T ss_pred EEECCCCcEEEEecCCCC
Confidence 999 688876 7788775
No 219
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.38 E-value=1.1e-12 Score=100.33 Aligned_cols=80 Identities=8% Similarity=-0.016 Sum_probs=60.6
Q ss_pred hHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhh--cCCCCcEEEEeC--ChhHHhhhCCCCCCeEEEEc-cccce
Q psy159 64 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGE--TDNMDITFVKMA--DPRYARKWGVTKLPAVVYFR-HRFPS 138 (285)
Q Consensus 64 ~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~--~~~~~v~~~~~~--~~~l~~~~~i~~~Ptl~~~~-~g~~~ 138 (285)
+.+.....++++++|.|||+||++|+.+.|.+.+.... +.+.++..+.+| ..+++.++++.++||+++|+ +|+.+
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v 114 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVR 114 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBC
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEE
Confidence 44566667789999999999999999999999764321 112247777776 45678899999999999998 78763
Q ss_pred -eecCC
Q psy159 139 -IYRGD 143 (285)
Q Consensus 139 -~y~g~ 143 (285)
+..|.
T Consensus 115 ~~~~G~ 120 (151)
T 3ph9_A 115 ADIAGR 120 (151)
T ss_dssp TTCCCS
T ss_pred EEEeCC
Confidence 35554
No 220
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.37 E-value=3.3e-12 Score=86.07 Aligned_cols=65 Identities=18% Similarity=0.370 Sum_probs=57.4
Q ss_pred EEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEcChHHHHhcCCcccCeEEEEeCCeEEEEecCC
Q psy159 181 LAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRNGNPLIFEGEN 249 (285)
Q Consensus 181 ~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~ 249 (285)
..|.||++||++|+.+.|.++++++++.+ ++.++.+++.+++++|+|.++||+++ +|+.+.. |..
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~v~~~Pt~~~--~G~~~~~-G~~ 66 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIKEMDQILEAGLTALPGLAV--DGELKIM-GRV 66 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEECSHHHHHHHTCSSSSCEEE--TTEEEEC-SSC
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEecCHHHHHHCCCCcCCEEEE--CCEEEEc-CCC
Confidence 35889999999999999999999999885 68888888889999999999999998 8886654 765
No 221
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.37 E-value=9.6e-13 Score=94.79 Aligned_cols=65 Identities=18% Similarity=0.313 Sum_probs=53.3
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-------cChHHHHhcCCcccCeEEEEeCCeEEEEecCCc
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-------QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 250 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-------~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~ 250 (285)
+++.+|.|||+||++|+.+.|.|+++++++. ++.+ .+++++++|+|+++||+++ +|+ .|.|.++
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~--~~~G~~~ 82 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR--TYTGVRS 82 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE--EEESCCC
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-----EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE--EecCCCC
Confidence 4556899999999999999999999997765 3333 2577999999999999877 887 4889886
Q ss_pred c
Q psy159 251 I 251 (285)
Q Consensus 251 ~ 251 (285)
.
T Consensus 83 ~ 83 (106)
T 3kp8_A 83 L 83 (106)
T ss_dssp H
T ss_pred H
Confidence 3
No 222
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.36 E-value=1.4e-12 Score=89.55 Aligned_cols=66 Identities=26% Similarity=0.378 Sum_probs=58.9
Q ss_pred EEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcCCcccCeEEEEeCCeEEEEecCCc
Q psy159 181 LAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 250 (285)
Q Consensus 181 ~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~ 250 (285)
.++.||++||++|+.+.|.++++++++.+ ++.+..+ .++.++++|+|.++|++++ +|+. .+.|..+
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~ 72 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-RFVGAPS 72 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-EEECSSC
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-EEccCCC
Confidence 57899999999999999999999999985 6888888 6778999999999999998 8887 7888764
No 223
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.35 E-value=3e-13 Score=120.97 Aligned_cols=92 Identities=14% Similarity=0.231 Sum_probs=76.0
Q ss_pred cccccccHHHHHHHHHh--CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcC-------CeEEEEE---cChHHHHhcCC
Q psy159 161 DRIELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIY-------GIHMVKI---QDPQLAKRYSI 228 (285)
Q Consensus 161 ~~v~~~~~~~~~~~~~~--~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~-------~i~~~~i---~~~~~~~~~~v 228 (285)
..+..++.++|++.+.+ +++++|.|||+||++|+.+.|.++++++++... .+.|+.+ .++.++++|+|
T Consensus 23 ~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V 102 (470)
T 3qcp_A 23 SSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDI 102 (470)
T ss_dssp TTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTC
T ss_pred CCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCC
Confidence 45667888888887654 478999999999999999999999999998731 3889998 67899999999
Q ss_pred cccCeEEEEeCCe---EEEEecCCccc
Q psy159 229 KTFPALVYFRNGN---PLIFEGENKIL 252 (285)
Q Consensus 229 ~~~Ptl~~~~~g~---~~~y~g~~~~e 252 (285)
.++||+++|++|+ ...|.|.++.+
T Consensus 103 ~~~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 103 NFVPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp CSSCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred CccCeEEEEECCCceEEEEeeCCCCHH
Confidence 9999999997554 33788876543
No 224
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.35 E-value=2.9e-12 Score=117.14 Aligned_cols=91 Identities=13% Similarity=0.302 Sum_probs=75.7
Q ss_pred ccccccccHHHHHHHHH-hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc--CCeEEEEEc-----ChHHHHhcCCccc
Q psy159 160 EDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI--YGIHMVKIQ-----DPQLAKRYSIKTF 231 (285)
Q Consensus 160 ~~~v~~~~~~~~~~~~~-~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~--~~i~~~~i~-----~~~~~~~~~v~~~ 231 (285)
...+..++.++|+..+. ++++++|.|||+||++|+.+.|.++++++++.+ ..+.|+.++ +.+++++|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 34677889999998764 578999999999999999999999999999985 258899882 6789999999999
Q ss_pred CeEEEEeC----CeE-EEEecCCc
Q psy159 232 PALVYFRN----GNP-LIFEGENK 250 (285)
Q Consensus 232 Ptl~~~~~----g~~-~~y~g~~~ 250 (285)
||+++|++ |+. ..+.|.++
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~ 114 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGAN 114 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCC
T ss_pred CEEEEEcCcccCCCceeEecCCCC
Confidence 99999985 433 35566664
No 225
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.35 E-value=1.3e-11 Score=102.85 Aligned_cols=151 Identities=11% Similarity=0.166 Sum_probs=116.3
Q ss_pred ccccchHHHHHcCCCCCCeEEEeecC--------ccccc-cCCCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhc
Q psy159 2 VKISDTEAAAKYNIINLPSLVYFRKQ--------VPLLY-DGDLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEE 72 (285)
Q Consensus 2 ~~~~~~~~~~~~~i~~~Ptl~~~~~~--------~~~~y-~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~ 72 (285)
+.+.+.+++++|++++ |+|++|+.+ .++.| +|.++ .++|.+|++.+..|. |.++|.+++..+ .
T Consensus 57 ~~~~~~~v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~-~~~l~~fi~~~~~Pl----v~e~t~~n~~~~--~ 128 (252)
T 2h8l_A 57 AHTNVESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMT-SGKIKKFIQENIFGI----CPHMTEDNKDLI--Q 128 (252)
T ss_dssp EEECCHHHHHHHCSSS-EEEEEECCGGGCCTTSCSEEECCCSSCC-HHHHHHHHHHHSSCS----SCEECTTTHHHH--S
T ss_pred EEEChHHHHHHhCCCC-CcEEEEcchhhcccccccccccCCCCcC-HHHHHHHHHhcccCC----eeecccccHhhh--c
Confidence 4567888999999997 999999852 46679 99874 449999999999999 999999999887 4
Q ss_pred CCcEEEEEeCCCChh----HHHHHHHHHhHHhhcC--CCCcEEEEeC---ChhHHhhhCC----CCCCeEEEEcc-ccce
Q psy159 73 NEFVTVFFYETDHKD----SVKVLERLEKIDGETD--NMDITFVKMA---DPRYARKWGV----TKLPAVVYFRH-RFPS 138 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~----C~~~~~~~~~~a~~~~--~~~v~~~~~~---~~~l~~~~~i----~~~Ptl~~~~~-g~~~ 138 (285)
+.+++|.|+.+.+.. ...+...+.++|+.++ +..+.|+.+| ...+++.||+ ..+|+++++.. +..+
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky 208 (252)
T 2h8l_A 129 GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKF 208 (252)
T ss_dssp SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEE
T ss_pred CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEe
Confidence 456777777654322 2257888899999994 3347888777 5668889999 35899999854 4455
Q ss_pred eecCCCchhHH--HHHHHhhhcccc
Q psy159 139 IYRGDLSEEEE--VLQWLITQKTED 161 (285)
Q Consensus 139 ~y~g~~~~~~~--l~~fi~~~~~~~ 161 (285)
.+.+..+.+ + |.+|+.+.....
T Consensus 209 ~~~~~~t~~-~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 209 VMQEEFSRD-GKALERFLQDYFDGN 232 (252)
T ss_dssp ECCSCCCTT-SHHHHHHHHHHHHTC
T ss_pred cCCcccCcc-hHHHHHHHHHHHCCC
Confidence 567777765 6 999999877543
No 226
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.34 E-value=3.7e-12 Score=98.13 Aligned_cols=86 Identities=10% Similarity=0.170 Sum_probs=66.7
Q ss_pred HhcCCcEEEEEe-CCCChhHHHHHHHH---HhHHhhcCCCCcEEEEeC---C-----------hhHHhhhCCCCCCeEEE
Q psy159 70 LEENEFVTVFFY-ETDHKDSVKVLERL---EKIDGETDNMDITFVKMA---D-----------PRYARKWGVTKLPAVVY 131 (285)
Q Consensus 70 ~~~~~~~lv~Fy-a~~c~~C~~~~~~~---~~~a~~~~~~~v~~~~~~---~-----------~~l~~~~~i~~~Ptl~~ 131 (285)
...+++++|.|| ++||++|+.+.|.+ .++++..+ .++.++.+| . ..++++|+|.++||+++
T Consensus 44 ~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~ 122 (154)
T 2ju5_A 44 KQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVF 122 (154)
T ss_dssp HHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred HhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEE
Confidence 346789999999 99999999999999 67765542 247777766 2 37899999999999999
Q ss_pred E-ccccce-eecCCC--chhHHHHHHHhhhc
Q psy159 132 F-RHRFPS-IYRGDL--SEEEEVLQWLITQK 158 (285)
Q Consensus 132 ~-~~g~~~-~y~g~~--~~~~~l~~fi~~~~ 158 (285)
+ ++|+.+ .+ |.. +.+ .+.+++.+.+
T Consensus 123 ~d~~G~~~~~~-G~~~~~~~-~l~~~l~~~l 151 (154)
T 2ju5_A 123 IDAEGKQLARM-GFEPGGGA-AYVSKVKSAL 151 (154)
T ss_dssp ECTTCCEEEEE-CCCTTCHH-HHHHHHHHHH
T ss_pred EcCCCCEEEEe-cCCCCCHH-HHHHHHHHHH
Confidence 9 567763 45 766 554 7888887643
No 227
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.34 E-value=2.1e-12 Score=100.70 Aligned_cols=93 Identities=13% Similarity=0.021 Sum_probs=69.1
Q ss_pred ecChhHHHHHHh-cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhC---CCCCCeEEEE
Q psy159 60 EVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWG---VTKLPAVVYF 132 (285)
Q Consensus 60 ~l~~~~f~~~~~-~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~---i~~~Ptl~~~ 132 (285)
.++++.++.+-. .+++++|.|||+||++|+.+.|.++++++.+. ++.++.++ +++++.+|+ +.++||++++
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~ 117 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVL 117 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEE
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEE
Confidence 456666666543 45788999999999999999999999998775 36777666 667888887 9999999999
Q ss_pred ccc-cceeecCCCchhHHHHHHHhh
Q psy159 133 RHR-FPSIYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 133 ~~g-~~~~y~g~~~~~~~l~~fi~~ 156 (285)
++| +....-|.+.. .+.+.+.+
T Consensus 118 ~~~G~~~~~~g~~p~--~~~~~i~~ 140 (167)
T 1z6n_A 118 DEEFNLLGRFVERPQ--AVLDGGPQ 140 (167)
T ss_dssp CTTCCEEEEEESSCH--HHHHHCHH
T ss_pred CCCCCEEEEEcCCCH--HHHHhHHH
Confidence 985 55433355543 35555544
No 228
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.34 E-value=4.2e-12 Score=95.03 Aligned_cols=83 Identities=17% Similarity=0.268 Sum_probs=68.6
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-------------------------ChhHHhhhCCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-------------------------DPRYARKWGVTKL 126 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-------------------------~~~l~~~~~i~~~ 126 (285)
.+++++|.||++||++|+.+.|.+.++++++. ++.++.++ +..++++|++.++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQ 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCC
Confidence 56889999999999999999999999999887 56666543 3578999999999
Q ss_pred CeEEEEc-cccceeec---CCCchhHHHHHHHhhh
Q psy159 127 PAVVYFR-HRFPSIYR---GDLSEEEEVLQWLITQ 157 (285)
Q Consensus 127 Ptl~~~~-~g~~~~y~---g~~~~~~~l~~fi~~~ 157 (285)
|+++++. +|+...+. |..+.+ ++.+++.+.
T Consensus 101 P~~~lid~~G~i~~~~~~~g~~~~~-~l~~~l~~l 134 (136)
T 1lu4_A 101 PAFVFYRADGTSTFVNNPTAAMSQD-ELSGRVAAL 134 (136)
T ss_dssp SEEEEECTTSCEEEECCSSSCCCHH-HHHHHHHHC
T ss_pred CEEEEECCCCcEEEEEcCCCccCHH-HHHHHHHHH
Confidence 9999995 57655677 877765 898888764
No 229
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.33 E-value=4e-12 Score=98.47 Aligned_cols=101 Identities=12% Similarity=0.193 Sum_probs=74.4
Q ss_pred eeecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEE--------------------------
Q psy159 58 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK-------------------------- 111 (285)
Q Consensus 58 v~~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~-------------------------- 111 (285)
+..++.+.+......+++++|.||++||++|+.+.|.+.++++.++..++.++.
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPK 102 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTT
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCc
Confidence 444444444333345689999999999999999999999999886333333321
Q ss_pred ----eC-ChhHHhhhCCCCCCeEEEE-ccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 112 ----MA-DPRYARKWGVTKLPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 112 ----~~-~~~l~~~~~i~~~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
.| +..++++|+|.++|+++++ ++|+. ..+.|..+.+ ++.+++.+...
T Consensus 103 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~~~~ 156 (164)
T 2h30_A 103 LPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEA-QALALIRNPNA 156 (164)
T ss_dssp SCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHH-HHHHHHHCTTC
T ss_pred ceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHH-HHHHHHHHHHH
Confidence 22 5678999999999999999 56766 4577877775 89999987653
No 230
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.32 E-value=6.1e-12 Score=93.99 Aligned_cols=84 Identities=19% Similarity=0.314 Sum_probs=68.7
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC--------------------------ChhHHhhhCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------DPRYARKWGVTK 125 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--------------------------~~~l~~~~~i~~ 125 (285)
.+++++|.||++||++|+.+.|.+.++++.++ ++.++.++ +..++++|+|.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 101 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC
Confidence 56889999999999999999999999999887 45555433 356889999999
Q ss_pred CCeEEEEc-cccceeecCCCchhHHHHHHHhhhc
Q psy159 126 LPAVVYFR-HRFPSIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 126 ~Ptl~~~~-~g~~~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|+++++. +|+...+.|..+.+ ++.+++.+.+
T Consensus 102 ~P~~~~id~~g~i~~~~g~~~~~-~l~~~l~~~l 134 (136)
T 1zzo_A 102 QPAYAFVDPHGNVDVVRGRMSQD-ELTRRVTALT 134 (136)
T ss_dssp SSEEEEECTTCCEEEEESCCCHH-HHHHHHHHHC
T ss_pred CceEEEECCCCCEEEEecCCCHH-HHHHHHHHHh
Confidence 99999995 56655788887775 8888887654
No 231
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.32 E-value=1.6e-11 Score=93.19 Aligned_cols=96 Identities=9% Similarity=0.129 Sum_probs=73.0
Q ss_pred cChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---------------------------
Q psy159 61 VNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------- 113 (285)
Q Consensus 61 l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--------------------------- 113 (285)
++.+.+......+++++|.||++||++|+.+.|.+.++++.+.+. +.++.++
T Consensus 17 ~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2b5x_A 17 LNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIF 95 (148)
T ss_dssp ESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEE
T ss_pred ccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCHHHHHHHHHHcCCCcceE
Confidence 333334333336789999999999999999999999999988553 5555442
Q ss_pred ---ChhHHhhhCCCCCCeEEEE-ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 114 ---DPRYARKWGVTKLPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 114 ---~~~l~~~~~i~~~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
...++++|+|.++|+++++ ++|+. ..+.|..+.+ ++.+++.+.+
T Consensus 96 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~l 144 (148)
T 2b5x_A 96 VDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMK-MLEKRVNRVL 144 (148)
T ss_dssp ECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTH-HHHHHHHHHH
T ss_pred ECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHH-HHHHHHHHHH
Confidence 3578999999999999999 56766 4577877665 7888887654
No 232
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.31 E-value=9.2e-12 Score=94.13 Aligned_cols=82 Identities=10% Similarity=0.238 Sum_probs=68.1
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC----------------------------ChhHHhhhCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----------------------------DPRYARKWGV 123 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~----------------------------~~~l~~~~~i 123 (285)
.+++++|.||++||++|+.+.|.+.++++.+...++.++.++ +..++++|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 568899999999999999999999999999965557766553 3478999999
Q ss_pred CCCCeEEEE-ccccc-eeecCCCchhHHHHHHH
Q psy159 124 TKLPAVVYF-RHRFP-SIYRGDLSEEEEVLQWL 154 (285)
Q Consensus 124 ~~~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi 154 (285)
.++|+++++ ++|+. ..+.|..+.+ ++.+++
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l 144 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAE-QLKEWT 144 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHH-HHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHH-HHHHhh
Confidence 999999999 56766 4688888775 788776
No 233
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.31 E-value=5.2e-12 Score=91.65 Aligned_cols=79 Identities=11% Similarity=0.166 Sum_probs=56.3
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcC----CeEEEEE---c--ChHHHHhcCCcccCeEEEEeCCeEE-EEe
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIY----GIHMVKI---Q--DPQLAKRYSIKTFPALVYFRNGNPL-IFE 246 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~----~i~~~~i---~--~~~~~~~~~v~~~Ptl~~~~~g~~~-~y~ 246 (285)
+...++|+|||+||++|+.+.+.+ +..+... .+.+.++ . ..+++.+++|.+.||+++|++|+.+ +..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i---~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~ 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEI---APQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLE 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHT---TTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHH---HhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeec
Confidence 356789999999999999998643 3333321 1445554 2 3578899999999999999999987 888
Q ss_pred cCCccchhHHHHHh
Q psy159 247 GENKILKGTYIGTY 260 (285)
Q Consensus 247 g~~~~e~~~~~~~~ 260 (285)
|.+..+. +..|+
T Consensus 94 G~~~~~~--f~~~L 105 (116)
T 3dml_A 94 GYPGEDF--FWPML 105 (116)
T ss_dssp CCCCHHH--HHHHH
T ss_pred CCCCHHH--HHHHH
Confidence 9886432 34444
No 234
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.29 E-value=1.9e-11 Score=93.49 Aligned_cols=87 Identities=15% Similarity=0.154 Sum_probs=70.1
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---------------------------ChhHHhhhC--
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---------------------------DPRYARKWG-- 122 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---------------------------~~~l~~~~~-- 122 (285)
.+++++|.||++||++|+.+.|.+.+++++++..++.++.++ ...++++|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 568999999999999999999999999999965567666543 235778899
Q ss_pred CCCCCeEEEEc-cccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 123 VTKLPAVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 123 i~~~Ptl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+.++|+++++. +|+. ..+.|..+.+ ++.+++++...
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~l~~ 140 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEK-SLTDAVKLAHS 140 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHH-HHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHH-HHHHHHHHHHH
Confidence 99999999985 5765 5688888775 88888876543
No 235
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.29 E-value=2e-12 Score=108.96 Aligned_cols=90 Identities=13% Similarity=0.011 Sum_probs=65.2
Q ss_pred hHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe---C-ChhHHhhhCCCCCCeEEEEcccccee
Q psy159 64 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM---A-DPRYARKWGVTKLPAVVYFRHRFPSI 139 (285)
Q Consensus 64 ~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~---~-~~~l~~~~~i~~~Ptl~~~~~g~~~~ 139 (285)
..+.+.+.+.. +|.||||||+||++++|.|+++|++++. +.+.++ + ++++|++++|+++||+++ +|+ .
T Consensus 190 ~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~~--Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~--~ 261 (291)
T 3kp9_A 190 VGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVPY--VECSPNGPGTPQAQECTEAGITSYPTWII--NGR--T 261 (291)
T ss_dssp HHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSCE--EESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE--E
T ss_pred HHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcCE--EEEeecCchhhHHHHHHHcCCcccCeEEE--CCE--E
Confidence 34555555443 6899999999999999999999977631 121111 2 689999999999999655 776 4
Q ss_pred ecCCCchhHHHHHHHhhhccccc
Q psy159 140 YRGDLSEEEEVLQWLITQKTEDR 162 (285)
Q Consensus 140 y~g~~~~~~~l~~fi~~~~~~~~ 162 (285)
|.|.++.+ ++.+|+.-....+.
T Consensus 262 ~~G~~~~~-~L~~~l~~~~~~~~ 283 (291)
T 3kp9_A 262 YTGVRSLE-ALAVASGYPLEEGR 283 (291)
T ss_dssp EESCCCHH-HHHHHTCCCC----
T ss_pred ecCCCCHH-HHHHHHCCCCccch
Confidence 99999886 89999876554443
No 236
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.29 E-value=1.6e-11 Score=95.63 Aligned_cols=83 Identities=16% Similarity=0.157 Sum_probs=63.8
Q ss_pred ccHHHHHHHHH-hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhcC---CcccCeEEEEe
Q psy159 166 ITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYS---IKTFPALVYFR 238 (285)
Q Consensus 166 ~~~~~~~~~~~-~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~---v~~~Ptl~~~~ 238 (285)
++.+.++.+.. .+++++|.|||+||++|+.+.|.+++++..+. ++.|..+ .+++++.+|. +.++||+++++
T Consensus 41 ~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 41 LPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 44444444322 36789999999999999999999999998875 5888888 5667788887 99999999998
Q ss_pred CC-eEEEEecCCc
Q psy159 239 NG-NPLIFEGENK 250 (285)
Q Consensus 239 ~g-~~~~y~g~~~ 250 (285)
+| +.+..-|.+.
T Consensus 119 ~~G~~~~~~g~~p 131 (167)
T 1z6n_A 119 EEFNLLGRFVERP 131 (167)
T ss_dssp TTCCEEEEEESSC
T ss_pred CCCCEEEEEcCCC
Confidence 75 6653335554
No 237
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.28 E-value=1.6e-11 Score=87.85 Aligned_cols=76 Identities=8% Similarity=0.125 Sum_probs=63.0
Q ss_pred cEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHH
Q psy159 75 FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQW 153 (285)
Q Consensus 75 ~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~f 153 (285)
..++.|+++||+.|+.+.|.++++++.++ ..+..+.++ +++++.+|++. .|++++|.+|+.+ ..|..+.+ .|.+|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-~~g~~~~~-~L~~~ 105 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-CHYFLDSD-VIGAY 105 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-ECSSCCCH-HHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-EecCCCHH-HHHHH
Confidence 56899999999999999999999988874 345556666 78999999997 9999999999875 45777665 78887
Q ss_pred H
Q psy159 154 L 154 (285)
Q Consensus 154 i 154 (285)
+
T Consensus 106 L 106 (107)
T 2fgx_A 106 L 106 (107)
T ss_dssp H
T ss_pred h
Confidence 6
No 238
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.94 E-value=3.4e-13 Score=100.66 Aligned_cols=81 Identities=20% Similarity=0.371 Sum_probs=65.6
Q ss_pred HHHHHHHHhCCeEEEEEECCCChhhHHHHHHH---HHHHhhcCcCCeEEEEE-----cChHHHHhcCCcccCeEEEE--e
Q psy159 169 VMLETMVEETQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI-----QDPQLAKRYSIKTFPALVYF--R 238 (285)
Q Consensus 169 ~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i-----~~~~~~~~~~v~~~Ptl~~~--~ 238 (285)
+.++....++++++|+||++||++|+.+.|.+ +++++.+.+ ++.++.+ .+..++++|+|.++||++++ +
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 34444555688999999999999999999999 888888775 5777766 34679999999999999999 6
Q ss_pred CCeE--E-EEecCCc
Q psy159 239 NGNP--L-IFEGENK 250 (285)
Q Consensus 239 ~g~~--~-~y~g~~~ 250 (285)
+|+. + .+.|..+
T Consensus 89 ~G~~~~~~~~~G~~~ 103 (130)
T 2lst_A 89 AGAWEEVGRLFGSRP 103 (130)
Confidence 7876 4 6778765
No 239
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.27 E-value=9.6e-11 Score=97.49 Aligned_cols=152 Identities=10% Similarity=0.081 Sum_probs=115.5
Q ss_pred CccccchHHHHHcCCCCCCeEEEeec--------CccccccC--CCcchHHHHHHhhcCCCcccccceeecChhHHHHHH
Q psy159 1 MVKISDTEAAAKYNIINLPSLVYFRK--------QVPLLYDG--DLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLL 70 (285)
Q Consensus 1 ~~~~~~~~~~~~~~i~~~Ptl~~~~~--------~~~~~y~g--~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~ 70 (285)
|+.+.+++++.+|++++ |+|++|+. .....|+| .++.+ +|.+|++.+..|. |.++|.+++..+.
T Consensus 57 F~~t~~~~v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~-~l~~fi~~~~~Pl----v~e~t~~n~~~~~ 130 (250)
T 3ec3_A 57 FHHTFSTEIAKFLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEAS-AIKDYVVKHALPL----VGHRKTSNDAKRY 130 (250)
T ss_dssp EEEECCHHHHHHHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTTSCHH-HHHHHHHHHSSCT----EEEECTTTHHHHS
T ss_pred EEEECcHHHHHHcCCCC-CeEEEEecchhhccccccceeccCCCCCCHH-HHHHHHHHcCCCc----eeecCccchhhhh
Confidence 34577889999999987 99999985 34677885 55444 9999999999999 9999999998877
Q ss_pred hcCCcEEEEEeCCC-C----hhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCC--C-CeEEEEcc-ccce
Q psy159 71 EENEFVTVFFYETD-H----KDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTK--L-PAVVYFRH-RFPS 138 (285)
Q Consensus 71 ~~~~~~lv~Fya~~-c----~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~--~-Ptl~~~~~-g~~~ 138 (285)
.+.+.++.|+.+. + .....+...+.++|+.++ .+.|+.+| ....++.||+.. + |.++++.. +..+
T Consensus 131 -~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky 207 (250)
T 3ec3_A 131 -SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKF 207 (250)
T ss_dssp -CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEE
T ss_pred -ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCcee
Confidence 4677778887643 2 234668899999999998 58888887 456678899974 4 46766653 3345
Q ss_pred eec-CCCchhHHHHHHHhhhccccc
Q psy159 139 IYR-GDLSEEEEVLQWLITQKTEDR 162 (285)
Q Consensus 139 ~y~-g~~~~~~~l~~fi~~~~~~~~ 162 (285)
.+. +..+.+ +|.+|+.+......
T Consensus 208 ~~~~~~~t~~-~i~~Fv~~~~~Gkl 231 (250)
T 3ec3_A 208 AMEPEEFDSD-ALREFVMAFKKGKL 231 (250)
T ss_dssp ECCCCSCCHH-HHHHHHHHHHTTCC
T ss_pred cCCcccCCHH-HHHHHHHHHHCCCc
Confidence 555 566665 99999998776443
No 240
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.27 E-value=3e-11 Score=92.92 Aligned_cols=73 Identities=22% Similarity=0.522 Sum_probs=59.3
Q ss_pred HHhCCeEEEEEE-CCCChhhHHHHHHH---HHHHhhcCcCCeEEEEE---cC-----------hHHHHhcCCcccCeEEE
Q psy159 175 VEETQYLAVYFY-KLNCNICDQILEGL---EKVDDECDIYGIHMVKI---QD-----------PQLAKRYSIKTFPALVY 236 (285)
Q Consensus 175 ~~~~~~~~v~F~-a~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i---~~-----------~~~~~~~~v~~~Ptl~~ 236 (285)
...+++++|.|| ++||++|+.+.|.+ .++.+.+.. ++.++.+ .. ..++++|+|.++||+++
T Consensus 44 ~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~ 122 (154)
T 2ju5_A 44 KQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVF 122 (154)
T ss_dssp HHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred HhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEE
Confidence 345889999999 99999999999999 777665533 5777777 22 37899999999999999
Q ss_pred E-eCCeEE-EEecCC
Q psy159 237 F-RNGNPL-IFEGEN 249 (285)
Q Consensus 237 ~-~~g~~~-~y~g~~ 249 (285)
+ ++|+.+ .+ |..
T Consensus 123 ~d~~G~~~~~~-G~~ 136 (154)
T 2ju5_A 123 IDAEGKQLARM-GFE 136 (154)
T ss_dssp ECTTCCEEEEE-CCC
T ss_pred EcCCCCEEEEe-cCC
Confidence 9 789876 56 766
No 241
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.27 E-value=1.2e-10 Score=96.38 Aligned_cols=146 Identities=14% Similarity=0.222 Sum_probs=91.7
Q ss_pred cCCcEEEEEe-CCCChhHH-HHHHHHHhHHhhcCCCCc-EEEEe--C-----------------------ChhHHhhhCC
Q psy159 72 ENEFVTVFFY-ETDHKDSV-KVLERLEKIDGETDNMDI-TFVKM--A-----------------------DPRYARKWGV 123 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~-~~~~~~~~~a~~~~~~~v-~~~~~--~-----------------------~~~l~~~~~i 123 (285)
.+++++|.|| +.||+.|. ...|.+.++.++++..++ .++.+ | +..+++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 4578888998 99999999 899999999988854455 55432 2 2345666666
Q ss_pred C-----------CCCeEEEEccccc-eeecCCC--------chhHHHHHHHhhhccccccccccHHHHHHHHHhCCeEEE
Q psy159 124 T-----------KLPAVVYFRHRFP-SIYRGDL--------SEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAV 183 (285)
Q Consensus 124 ~-----------~~Ptl~~~~~g~~-~~y~g~~--------~~~~~l~~fi~~~~~~~~v~~~~~~~~~~~~~~~~~~~v 183 (285)
. ..|+.+++++|+. ..+.|.. ...+++++.+.... + ....++
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~----------------i--~~~~i~ 173 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH----------------Q--VQESIS 173 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS----------------C--CCCCEE
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc----------------c--ccceEE
Confidence 4 2355555555654 2233321 11124444443211 0 123466
Q ss_pred EEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cC---hHHHHhcCCcccCeEEEEeCCeE
Q psy159 184 YFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD---PQLAKRYSIKTFPALVYFRNGNP 242 (285)
Q Consensus 184 ~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~---~~~~~~~~v~~~Ptl~~~~~g~~ 242 (285)
.|..+||++|+++...+++.... .....+ .+ ..+.+.++..++|++.+ +|+.
T Consensus 174 ly~~~~Cp~C~~a~~~L~~~~i~-----~~~~~i~~~~~~~~l~~~~g~~~vP~~~~--~g~~ 229 (241)
T 1nm3_A 174 IFTKPGCPFCAKAKQLLHDKGLS-----FEEIILGHDATIVSVRAVSGRTTVPQVFI--GGKH 229 (241)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCC-----CEEEETTTTCCHHHHHHHTCCSSSCEEEE--TTEE
T ss_pred EEECCCChHHHHHHHHHHHcCCc-----eEEEECCCchHHHHHHHHhCCCCcCEEEE--CCEE
Confidence 78899999999999998876433 334444 11 45777889999999854 6753
No 242
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.25 E-value=3.3e-11 Score=92.06 Aligned_cols=87 Identities=13% Similarity=0.177 Sum_probs=69.9
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--CC-----------------------hhHHhhhCCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--AD-----------------------PRYARKWGVTKL 126 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~~-----------------------~~l~~~~~i~~~ 126 (285)
.+++++|.||++||++|+.+.|.+.++++.++..++.++.+ +. ..+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 46889999999999999999999999999986545555544 32 378899999999
Q ss_pred CeEEEE-ccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 127 PAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 127 Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
|+++++ ++|+. ..+.|..+.+ ++.+++...+.
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~-~l~~~l~~ll~ 138 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTES-MIHDYMNLIKP 138 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHH-HHHHHHHHHSC
T ss_pred CeEEEECCCCcEEEEEeCCCCHH-HHHHHHHHHHh
Confidence 999998 56776 4577887765 88888887654
No 243
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.25 E-value=3.5e-11 Score=92.04 Aligned_cols=87 Identities=14% Similarity=0.196 Sum_probs=70.0
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe-------------------------C-ChhHHhhhCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM-------------------------A-DPRYARKWGVTK 125 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~-------------------------~-~~~l~~~~~i~~ 125 (285)
.+++++|.||++||++|+.+.|.+.++++.+...++.++.+ + ...+++.|+|.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 56889999999999999999999999999986555555432 2 567899999999
Q ss_pred CCeEEEEc-cccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 126 LPAVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 126 ~Ptl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+|+++++. +|+. ..+.|..+.+ ++.+++.+.+.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~ll~ 141 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFG-KLYQEIDTAWR 141 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHH-HHHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHH-HHHHHHHHHHH
Confidence 99999994 5765 4688877765 88888876553
No 244
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.25 E-value=1.2e-11 Score=96.63 Aligned_cols=78 Identities=14% Similarity=0.165 Sum_probs=64.0
Q ss_pred ecChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHH-H--HhHHhhcCCCCcEEEEeC---ChhHHhhh--------CCCC
Q psy159 60 EVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLER-L--EKIDGETDNMDITFVKMA---DPRYARKW--------GVTK 125 (285)
Q Consensus 60 ~l~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~-~--~~~a~~~~~~~v~~~~~~---~~~l~~~~--------~i~~ 125 (285)
..+++.|+.....+++++|.|||+||++|+.|.|. | .++++.++. ++.++++| .+++++.| |+.+
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g 104 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRGG 104 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCCC
Confidence 34578899888899999999999999999999993 3 567776643 37788777 67888888 9999
Q ss_pred CCeEEEEc-cccce
Q psy159 126 LPAVVYFR-HRFPS 138 (285)
Q Consensus 126 ~Ptl~~~~-~g~~~ 138 (285)
+|+++++. +|+++
T Consensus 105 ~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 105 WPLNIIMTPGKKPF 118 (173)
T ss_dssp SSEEEEECTTSCEE
T ss_pred CcceeeECCCCCce
Confidence 99999997 57663
No 245
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.24 E-value=3.6e-11 Score=93.07 Aligned_cols=87 Identities=14% Similarity=0.167 Sum_probs=69.6
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhh---------------------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKW--------------------------- 121 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~--------------------------- 121 (285)
.+++++|.||++||++|+.+.|.+.++++.++..++.++.++ ....+++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 568999999999999999999999999999976567777654 35555555
Q ss_pred CCCCCCeEEEE-ccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 122 GVTKLPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 122 ~i~~~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
++.++|+++++ ++|+. ..+.|..+.+ ++.+++.+.+.
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~l~ 151 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKA-DFDRIVKMALG 151 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHH-HHHHHHHHHHC
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHH-HHHHHHHHHHh
Confidence 89999999998 46766 4577888765 88888877653
No 246
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.24 E-value=5.3e-12 Score=98.29 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=60.4
Q ss_pred HHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc-CCeEEEEE-cChH-HHHhcCC--cccCeEEEE-eCCeE
Q psy159 169 VMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI-QDPQ-LAKRYSI--KTFPALVYF-RNGNP 242 (285)
Q Consensus 169 ~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i-~~~~-~~~~~~v--~~~Ptl~~~-~~g~~ 242 (285)
+.++.....+++++|.||++||++|+.+.|.++++++.+.. ..+..+.+ .++. ++..|++ .++||++++ ++|+.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 45666677789999999999999999999999998766542 12333444 3334 6788888 669999999 78987
Q ss_pred E-EEecC
Q psy159 243 L-IFEGE 248 (285)
Q Consensus 243 ~-~y~g~ 248 (285)
+ .+.|.
T Consensus 117 ~~~~~G~ 123 (164)
T 1sen_A 117 HPEIINE 123 (164)
T ss_dssp CTTCCCT
T ss_pred EEEEeCC
Confidence 6 56664
No 247
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.24 E-value=1.5e-11 Score=96.27 Aligned_cols=83 Identities=14% Similarity=0.238 Sum_probs=59.3
Q ss_pred cHHHHHHHH----HhCCeEEEEEECCCChhhHHHHHHH---HHHHhhcCcCCeEEEEE---cChHH--------------
Q psy159 167 TRVMLETMV----EETQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI---QDPQL-------------- 222 (285)
Q Consensus 167 ~~~~~~~~~----~~~~~~~v~F~a~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i---~~~~~-------------- 222 (285)
+..++++.+ .++++++|.|||+||++|+.+.+.+ .++.+.++. ++.++.+ +...+
T Consensus 32 ~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~ 110 (172)
T 3f9u_A 32 KFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTERT 110 (172)
T ss_dssp CBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEEEE
T ss_pred chhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchhhh
Confidence 334454443 4589999999999999999974443 455555543 4677777 22222
Q ss_pred ------------HHhcCCcccCeEEEE-eCCeEE-EEecCCc
Q psy159 223 ------------AKRYSIKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 223 ------------~~~~~v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
+++|+|.++||++++ ++|+.+ .+.|...
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~ 152 (172)
T 3f9u_A 111 LRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDE 152 (172)
T ss_dssp EEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCC
T ss_pred hhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCC
Confidence 688999999999999 788866 6678775
No 248
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.23 E-value=8.3e-12 Score=95.54 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=58.3
Q ss_pred HHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHh--hcCcCCeEEEEE--cChHHHHhcCCcccCeEEEEe-CCeEE-
Q psy159 170 MLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDD--ECDIYGIHMVKI--QDPQLAKRYSIKTFPALVYFR-NGNPL- 243 (285)
Q Consensus 170 ~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~--~~~~~~i~~~~i--~~~~~~~~~~v~~~Ptl~~~~-~g~~~- 243 (285)
.++....++++++|.|||+||++|+.+.|.+.+... .+.+.++..+.+ +..+++..+++.++||+++++ +|+.+
T Consensus 36 al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~ 115 (151)
T 3ph9_A 36 GLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRA 115 (151)
T ss_dssp HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCT
T ss_pred HHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEE
Confidence 345556679999999999999999999999886432 121113444555 345678889999999999998 88866
Q ss_pred EEecC
Q psy159 244 IFEGE 248 (285)
Q Consensus 244 ~y~g~ 248 (285)
+..|.
T Consensus 116 ~~~G~ 120 (151)
T 3ph9_A 116 DIAGR 120 (151)
T ss_dssp TCCCS
T ss_pred EEeCC
Confidence 55665
No 249
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.23 E-value=8.1e-11 Score=87.75 Aligned_cols=83 Identities=16% Similarity=0.252 Sum_probs=67.4
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe------------------------------C-ChhHHhh
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM------------------------------A-DPRYARK 120 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~------------------------------~-~~~l~~~ 120 (285)
.+++++|.||++||++|+...|.+.++++.++. ++.++.+ + +..++++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 568899999999999999999999999988632 4666655 1 4568999
Q ss_pred hCCCCCCeEEEE-ccccc-eeecCCCchhHHHHHHHhh
Q psy159 121 WGVTKLPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 121 ~~i~~~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~ 156 (285)
|++.++|+++++ ++|+. ..+.|..+.+ ++.+++.+
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~ 136 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTHPGFMEKD-AILQTLKE 136 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEEESCCCHH-HHHHHHHH
T ss_pred cCcccCCeEEEECCCCcEEEeecCCCcHH-HHHHHHHh
Confidence 999999999999 56766 4678887775 88888765
No 250
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.22 E-value=3.8e-11 Score=93.80 Aligned_cols=90 Identities=13% Similarity=0.250 Sum_probs=69.6
Q ss_pred HHhhhccc-cccccccHHHHHHHHHhCCeEEEEEECCCChhhHHHHH-HH--HHHHhhcCcCCeEEEEE---cChHHHHh
Q psy159 153 WLITQKTE-DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILE-GL--EKVDDECDIYGIHMVKI---QDPQLAKR 225 (285)
Q Consensus 153 fi~~~~~~-~~v~~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~-~~--~~la~~~~~~~i~~~~i---~~~~~~~~ 225 (285)
++..+... -.......+.|+....++++++|.||++||++|+.|.+ .| .++++.+.. ++.++++ +.+++.+.
T Consensus 13 yl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~ 91 (173)
T 3ira_A 13 YLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNI 91 (173)
T ss_dssp HHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHH
T ss_pred HHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHH
Confidence 34444433 33455667889888889999999999999999999998 34 466666654 5777777 56788888
Q ss_pred c--------CCcccCeEEEEe-CCeEE
Q psy159 226 Y--------SIKTFPALVYFR-NGNPL 243 (285)
Q Consensus 226 ~--------~v~~~Ptl~~~~-~g~~~ 243 (285)
| ++.++|+++++. +|+++
T Consensus 92 y~~~~q~~~gv~g~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 92 YMTVCQIILGRGGWPLNIIMTPGKKPF 118 (173)
T ss_dssp HHHHHHHHHSCCCSSEEEEECTTSCEE
T ss_pred HHHHHHHHcCCCCCcceeeECCCCCce
Confidence 8 999999999996 88876
No 251
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.22 E-value=4.1e-11 Score=82.73 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=58.6
Q ss_pred EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHh
Q psy159 77 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLI 155 (285)
Q Consensus 77 lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~ 155 (285)
++.|+++||+.|+.+.|.+++++..+ ...+.++ +++++.+||+. .|++++ .+|+.+. |..+.+ .|.+++.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~--g~~~~~-~L~~~l~ 73 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD--WPFDAP-RLRAWLD 73 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE--SCCCHH-HHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe--CCCCHH-HHHHHHH
Confidence 68999999999999999999886543 3344555 78999999998 999988 8887753 777665 8999987
Q ss_pred hhc
Q psy159 156 TQK 158 (285)
Q Consensus 156 ~~~ 158 (285)
...
T Consensus 74 ~~~ 76 (87)
T 1ttz_A 74 AAP 76 (87)
T ss_dssp TCC
T ss_pred HHH
Confidence 654
No 252
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.21 E-value=8e-11 Score=90.53 Aligned_cols=87 Identities=10% Similarity=0.065 Sum_probs=69.3
Q ss_pred cCCcEEEEEeCCCChhHHHH-HHHHHhHHhhcCCCCcEEEEeC-------------------------------Ch----
Q psy159 72 ENEFVTVFFYETDHKDSVKV-LERLEKIDGETDNMDITFVKMA-------------------------------DP---- 115 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~-~~~~~~~a~~~~~~~v~~~~~~-------------------------------~~---- 115 (285)
.+++++|.||++||++|+.. .|.+.++.+++++.++.++.++ ..
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 46899999999999999995 9999999999975567666543 11
Q ss_pred -hHHhhhCCCCCCeEEEEc-cccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 116 -RYARKWGVTKLPAVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 116 -~l~~~~~i~~~Ptl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
.+++.|++.++|+++++. +|+. ..+.|..+.+ ++.+.+.+.+.
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~ll~ 152 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSEL-LLGAEIATLLG 152 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHH-HHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHH-HHHHHHHHHhc
Confidence 589999999999999985 5765 4677887765 78888776553
No 253
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.20 E-value=5.1e-11 Score=90.97 Aligned_cols=87 Identities=11% Similarity=0.167 Sum_probs=69.8
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---Ch-----------------------hHHhhhCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DP-----------------------RYARKWGVTK 125 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~-----------------------~l~~~~~i~~ 125 (285)
.+++++|.||++||++|+.+.|.+.++.+.+.+.++.++.++ .. .++++|++.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 467899999999999999999999999999866566666553 22 6889999999
Q ss_pred CCeEEEEc-cccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 126 LPAVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 126 ~Ptl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+|+++++. +|+. ..+.|..+.+ ++.+++.....
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~~~ 143 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDP-KTAEKFNELLG 143 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCH-HHHHHHHHHHT
T ss_pred CCEEEEECCCCeEEEccCCCCCHH-HHHHHHHHHhc
Confidence 99999997 5765 3456766664 88888877654
No 254
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.20 E-value=1.1e-10 Score=89.94 Aligned_cols=87 Identities=11% Similarity=0.139 Sum_probs=69.5
Q ss_pred cCCcEEEEEeCCCChhHHH-HHHHHHhHHhhcCCCCcEEEEeC-------------------------------Chh---
Q psy159 72 ENEFVTVFFYETDHKDSVK-VLERLEKIDGETDNMDITFVKMA-------------------------------DPR--- 116 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~-~~~~~~~~a~~~~~~~v~~~~~~-------------------------------~~~--- 116 (285)
.+++++|.||++||++|+. +.|.+.++.+++++.++.++.++ ...
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4789999999999999999 69999999999966566666542 223
Q ss_pred ---HHhhhCCCCCCeEEEEc-cccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 117 ---YARKWGVTKLPAVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 117 ---l~~~~~i~~~Ptl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
++++|++.++|+++++. +|+. ..+.|..+.+ .+.+.+.+.+.
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~ll~ 155 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDF-VLGLLLGSLLS 155 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHH-HHHHHHHHHHT
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCCHH-HHHHHHHHHHh
Confidence 88999999999999996 5765 4577887765 78888876553
No 255
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.19 E-value=1.4e-10 Score=87.60 Aligned_cols=74 Identities=20% Similarity=0.307 Sum_probs=63.5
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---c-------------------------ChHHHHhcCC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q-------------------------DPQLAKRYSI 228 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~-------------------------~~~~~~~~~v 228 (285)
.+++++|.||++||++|+.+.+.+.++.+++...++.++.+ . ...+++.|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 46789999999999999999999999999998446888877 1 3478999999
Q ss_pred cccCeEEEE-eCCeEE-EEecCCc
Q psy159 229 KTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 229 ~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
.++|+++++ ++|+.+ .+.|..+
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~ 136 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMT 136 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCC
T ss_pred CccCeEEEEcCCCcEEEEEcCCcC
Confidence 999999999 788865 7788775
No 256
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.19 E-value=8.9e-11 Score=89.88 Aligned_cols=85 Identities=14% Similarity=0.205 Sum_probs=70.1
Q ss_pred CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe----------------------------CChhHHhhhCCCC
Q psy159 74 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM----------------------------ADPRYARKWGVTK 125 (285)
Q Consensus 74 ~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~----------------------------~~~~l~~~~~i~~ 125 (285)
++++|.||++||++|+...|.+.++++.+ +..+..+.+ ....++++|++.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG 109 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc
Confidence 78999999999999999999999999998 555555666 3467889999999
Q ss_pred CCeEEEE-ccccc-eeecCCCchhHHHHHHHhhhccc
Q psy159 126 LPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQKTE 160 (285)
Q Consensus 126 ~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~~~ 160 (285)
+|+++++ ++|+. ..+.|..+.+ ++.+++++....
T Consensus 110 ~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~~~~ 145 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGRAGRE-ALLDALLLAGAD 145 (154)
T ss_dssp SCEEEEECTTSEEEEEEESBCCHH-HHHHHHHHTTCC
T ss_pred ccEEEEECCCCCEEEEEcCCCCHH-HHHHHHHhccCc
Confidence 9998888 46765 4678877775 899999887653
No 257
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.17 E-value=1.2e-10 Score=88.35 Aligned_cols=84 Identities=14% Similarity=0.219 Sum_probs=64.8
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhc-CCCCcEEEEe--C-C-------------------------hhHHhhhC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGET-DNMDITFVKM--A-D-------------------------PRYARKWG 122 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~-~~~~v~~~~~--~-~-------------------------~~l~~~~~ 122 (285)
.+++++|.||++||++|+.+.|.+.++++.+ +..++.++.+ | . ..++++|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 5689999999999999999999999999999 7666777655 3 2 26889999
Q ss_pred CCCCCeEEEEc-cccceeecCCCchhHHHHHHHhhhc
Q psy159 123 VTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 123 i~~~Ptl~~~~-~g~~~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+.++|+++++. +|+.. +... +. +++.+++.+.+
T Consensus 112 v~~~P~~~lid~~G~i~-~~~~-~~-~~l~~~l~~ll 145 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKIL-ARDI-QG-EALTGKLKELL 145 (148)
T ss_dssp CCSSSEEEEECTTSBEE-EESC-CH-HHHHHHHHHHC
T ss_pred CCCcCEEEEECCCCeEE-EecC-CH-HHHHHHHHHHH
Confidence 99999999995 56543 2222 33 36777776543
No 258
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.17 E-value=1.8e-10 Score=87.91 Aligned_cols=88 Identities=13% Similarity=0.156 Sum_probs=68.1
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-Ch----------------------hHHhhhCCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-DP----------------------RYARKWGVTKL 126 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-~~----------------------~l~~~~~i~~~ 126 (285)
.+++++|.||++||++|+.+.|.+.++++.+...++.++.+ + .. .+++.|++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 46789999999999999999999999999996555665544 3 22 67888999999
Q ss_pred CeEEEE-ccccc-eeecCCCch-hHHHHHHHhhhcc
Q psy159 127 PAVVYF-RHRFP-SIYRGDLSE-EEEVLQWLITQKT 159 (285)
Q Consensus 127 Ptl~~~-~~g~~-~~y~g~~~~-~~~l~~fi~~~~~ 159 (285)
|+++++ ++|+. ..+.|.... .+++.+++.+...
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~ 142 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALG 142 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHc
Confidence 999888 46765 456675432 2378888887764
No 259
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.15 E-value=4.9e-11 Score=90.45 Aligned_cols=84 Identities=8% Similarity=0.138 Sum_probs=64.6
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---Chh-------------------------HHhhhCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPR-------------------------YARKWGV 123 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~-------------------------l~~~~~i 123 (285)
.+++++|.||++||++|+.+.|.+.++.+.++..++.++.++ ... ++++|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 568899999999999999999999999999965556666553 334 8999999
Q ss_pred CCCCeEEEEc-cccc-eeecCCCchhHHHHHHHhh
Q psy159 124 TKLPAVVYFR-HRFP-SIYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 124 ~~~Ptl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~ 156 (285)
.++|+++++. +|+. ..+.|....+ ++++.+.+
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~~~-~~l~~l~~ 143 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYENLD-DFLVQYEK 143 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGGHH-HHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHHHHH-HHHHHHHH
Confidence 9999999994 5765 3455654443 55555543
No 260
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.15 E-value=2.2e-10 Score=86.70 Aligned_cols=73 Identities=16% Similarity=0.427 Sum_probs=62.0
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc------------------------------ChHHHHhc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ------------------------------DPQLAKRY 226 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~------------------------------~~~~~~~~ 226 (285)
.+++++|.||++||++|+.+.|.++++.+++.+ ++.+..+. ...+++.|
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-QLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence 568899999999999999999999999999986 37777662 34689999
Q ss_pred CCcccCeEEEE-eCCeEE-EEecCCc
Q psy159 227 SIKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 227 ~v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
+|.++|+++++ ++|+.+ .+.|..+
T Consensus 107 ~v~~~P~~~lid~~G~i~~~~~g~~~ 132 (148)
T 2b5x_A 107 ENEYVPAYYVFDKTGQLRHFQAGGSG 132 (148)
T ss_dssp CCCCSSEEEEECTTCBEEEEEESCST
T ss_pred CCCCCCEEEEECCCCcEEEEecCCCC
Confidence 99999999999 788866 6778664
No 261
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.15 E-value=4.8e-10 Score=86.33 Aligned_cols=86 Identities=14% Similarity=0.242 Sum_probs=69.9
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---c-------------------ChHHHHhcCCcccCeE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q-------------------DPQLAKRYSIKTFPAL 234 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~-------------------~~~~~~~~~v~~~Ptl 234 (285)
.+++++|.||++||++|+...+.+.++.+++...++.++.+ . ...+++.|+|.++|++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 46789999999999999999999999999998546888877 2 4689999999999998
Q ss_pred EEE-eCCeEE-EEecCCccchhHHHHHhhh
Q psy159 235 VYF-RNGNPL-IFEGENKILKGTYIGTYIS 262 (285)
Q Consensus 235 ~~~-~~g~~~-~y~g~~~~e~~~~~~~~~~ 262 (285)
+++ ++|+.+ .+.|....+...++..+.+
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHHh
Confidence 887 688766 7888876555555555543
No 262
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.14 E-value=4.3e-10 Score=85.78 Aligned_cols=74 Identities=15% Similarity=0.366 Sum_probs=62.4
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---c----------------------ChHHHHhcCCccc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q----------------------DPQLAKRYSIKTF 231 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~----------------------~~~~~~~~~v~~~ 231 (285)
.+++++|.||++||++|+.+.|.+.++.+++.+.++.+..+ . +..+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 46889999999999999999999999999987645777777 2 3478999999999
Q ss_pred CeEEEE-eCCeEE-EEecCCc
Q psy159 232 PALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 232 Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
|+++++ ++|+.+ .+.|..+
T Consensus 105 P~~~lid~~G~i~~~~~G~~~ 125 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMT 125 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCC
T ss_pred CeEEEECCCCcEEEEEeCCCC
Confidence 999999 788866 6778764
No 263
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.14 E-value=3.1e-10 Score=84.64 Aligned_cols=72 Identities=19% Similarity=0.423 Sum_probs=61.9
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---c----------------------ChHHHHhcCCccc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q----------------------DPQLAKRYSIKTF 231 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~----------------------~~~~~~~~~v~~~ 231 (285)
.+++++|.||++||++|+.+.+.++++++++. ++.++.+ . ...+++.|++.++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQ 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCC
Confidence 46789999999999999999999999999987 5777777 2 5678999999999
Q ss_pred CeEEEE-eCCeEEEEe---cCCc
Q psy159 232 PALVYF-RNGNPLIFE---GENK 250 (285)
Q Consensus 232 Ptl~~~-~~g~~~~y~---g~~~ 250 (285)
|+++++ ++|+.+.+. |..+
T Consensus 101 P~~~lid~~G~i~~~~~~~g~~~ 123 (136)
T 1lu4_A 101 PAFVFYRADGTSTFVNNPTAAMS 123 (136)
T ss_dssp SEEEEECTTSCEEEECCSSSCCC
T ss_pred CEEEEECCCCcEEEEEcCCCccC
Confidence 999999 688866677 7664
No 264
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.14 E-value=9.4e-11 Score=88.60 Aligned_cols=82 Identities=13% Similarity=0.310 Sum_probs=60.6
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHh---HHhhcCCCCcEEEEeC---Ch------------------------hHHhhh
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEK---IDGETDNMDITFVKMA---DP------------------------RYARKW 121 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~---~a~~~~~~~v~~~~~~---~~------------------------~l~~~~ 121 (285)
.+++++|.||++||++|+...|.+.+ +.+.++..++.++.++ .. .+++.|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 35889999999999999999999999 8888855566666553 21 147789
Q ss_pred CCCCCCeEEEEccccceeecCCCchhHHHHHHHh
Q psy159 122 GVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLI 155 (285)
Q Consensus 122 ~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~ 155 (285)
+|.++|+++++.....+.+.+. .. +++.+|++
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~~-~~-~~l~~~l~ 141 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTVLLKDA-TL-QKVEQYLA 141 (142)
T ss_dssp CCTTCSEEEEECTTCBEEEEEE-CH-HHHHHHHH
T ss_pred CCCcCCeEEEECCCCcEEecCC-CH-HHHHHHHh
Confidence 9999999999975334343332 23 36777775
No 265
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.13 E-value=1.5e-10 Score=87.37 Aligned_cols=84 Identities=18% Similarity=0.349 Sum_probs=61.3
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHh---HHhhcCCCCcEEEEe--C-ChhH------------------------Hhhh
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEK---IDGETDNMDITFVKM--A-DPRY------------------------ARKW 121 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~---~a~~~~~~~v~~~~~--~-~~~l------------------------~~~~ 121 (285)
.+++++|.||++||++|+...|.+.+ +.+.++..++.++.+ | .... ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 46899999999999999999999988 888885445666654 3 2222 3489
Q ss_pred CCCCCCeEEEEccccceeecCCCchhHHHHHHHhhh
Q psy159 122 GVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 122 ~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~ 157 (285)
+|.++|+++++.....+.+ +..+.+ ++.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~i~~-~~~~~~-~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRVIL-KDTSME-QLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCBEEE-CSCCHH-HHHHHHHC-
T ss_pred CCCCCCeEEEECCCCCEEe-cCCCHH-HHHHHHHHH
Confidence 9999999999964333344 445554 788888764
No 266
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.13 E-value=7.8e-10 Score=101.62 Aligned_cols=133 Identities=12% Similarity=0.137 Sum_probs=97.5
Q ss_pred CCCCeEEEeecCc--cccccCCCcchHHHHHHhhcCCCcccccceeecChhHHHHHHhc-CCcEEEEEeCCCChhHHHHH
Q psy159 16 INLPSLVYFRKQV--PLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEE-NEFVTVFFYETDHKDSVKVL 92 (285)
Q Consensus 16 ~~~Ptl~~~~~~~--~~~y~g~~~~~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~~~-~~~~lv~Fya~~c~~C~~~~ 92 (285)
..-|++.+.++|. -+.|.|--.-. ++..|+..-... +..-..++++.++.+... ++..++.|+++||++|+.+.
T Consensus 60 ~~~p~~~~~~~~~~~~i~f~g~p~g~-e~~s~~~~l~~~--~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~ 136 (521)
T 1hyu_A 60 VRKPSFLITNPGSQQGPRFAGSPLGH-EFTSLVLALLWT--GGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVV 136 (521)
T ss_dssp SCSSEEEEECTTCCCSCEEESCCCGG-GHHHHHHHHHHH--TTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHH
T ss_pred cCCCEEEEecCCCcceEEEeccCcch-hHHHHHHHHHhh--cCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHH
Confidence 3579999998773 46687766555 566666441110 011235788888887543 45568899999999999999
Q ss_pred HHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhhh
Q psy159 93 ERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 93 ~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~ 157 (285)
|.+++++..+. ++.+..+| .++++.+|+|.+.|++++ +|+.+ ..|....+ +|.+++...
T Consensus 137 ~~l~~~a~~~~--~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g~~~-~~G~~~~~-~l~~~l~~~ 198 (521)
T 1hyu_A 137 QALNLMAVLNP--RIKHTAIDGGTFQNEITERNVMGVPAVFV--NGKEF-GQGRMTLT-EIVAKVDTG 198 (521)
T ss_dssp HHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE-EESCCCHH-HHHHHHCCS
T ss_pred HHHHHHHhHcC--ceEEEEEechhhHHHHHHhCCCccCEEEE--CCEEE-ecCCCCHH-HHHHHHhhc
Confidence 99999988875 47777665 789999999999999977 77664 34777665 899998765
No 267
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.13 E-value=2.8e-10 Score=86.86 Aligned_cols=74 Identities=18% Similarity=0.238 Sum_probs=61.6
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-------------------------ChHHHHhcC--
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-------------------------DPQLAKRYS-- 227 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-------------------------~~~~~~~~~-- 227 (285)
.+++++|.||++||++|+.+.|.++++.+++++.++.++.+ + ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 46899999999999999999999999999997556888877 2 244778899
Q ss_pred CcccCeEEEE-eCCeEE-EEecCCc
Q psy159 228 IKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 228 v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
+.++|+++++ ++|+.+ .+.|..+
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~ 127 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVN 127 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCC
T ss_pred cCCCCEEEEECCCCcEEEEECCCCC
Confidence 9999998888 678765 7778775
No 268
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.13 E-value=3.6e-10 Score=86.41 Aligned_cols=86 Identities=15% Similarity=0.280 Sum_probs=66.3
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC--C------------------------hhHHhhhCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--D------------------------PRYARKWGVTK 125 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--~------------------------~~l~~~~~i~~ 125 (285)
.+++++|.||++||++|+...|.+.++.+.+.+.++.++.++ . ..++++|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 568999999999999999999999999999966566666554 2 23889999999
Q ss_pred CCeEEEEc-cccc-eeecCCC--chhHHHHHHHhhhc
Q psy159 126 LPAVVYFR-HRFP-SIYRGDL--SEEEEVLQWLITQK 158 (285)
Q Consensus 126 ~Ptl~~~~-~g~~-~~y~g~~--~~~~~l~~fi~~~~ 158 (285)
+|+++++. +|+. ..+.|.. ..+ ++.+++.+..
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~-~l~~~l~~l~ 142 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHP-EVIAFLNNEL 142 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSH-HHHHHHHTC-
T ss_pred CCeEEEECCCCcEEEEEcCCCccccH-HHHHHHHHHH
Confidence 99777774 5765 3466764 443 7888887654
No 269
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.12 E-value=4.6e-10 Score=85.79 Aligned_cols=83 Identities=11% Similarity=0.081 Sum_probs=61.9
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--CC--------------------------hhHHhhhCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--AD--------------------------PRYARKWGV 123 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~~--------------------------~~l~~~~~i 123 (285)
.+++++|.||++||++|+...|.+.++.+.+++.++.++.+ |. ..++++|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 46789999999999999999999999999996555666654 32 568899999
Q ss_pred CCCCeEEEE-ccccceeecCCCchhHHHHHHHhhh
Q psy159 124 TKLPAVVYF-RHRFPSIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 124 ~~~Ptl~~~-~~g~~~~y~g~~~~~~~l~~fi~~~ 157 (285)
.++|+++++ ++|+..... ...+ ++.+++++.
T Consensus 108 ~~~P~~~lid~~G~i~~~~--~~~~-~l~~~l~~l 139 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKE--LRGD-DLYNTVEKF 139 (152)
T ss_dssp CSSCEEEEECTTSEEEEEC--CCTT-HHHHHHHHH
T ss_pred CcCCeEEEECCCCeEEEee--CCHH-HHHHHHHHH
Confidence 999999999 457653221 1222 566665543
No 270
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.12 E-value=3.1e-10 Score=87.97 Aligned_cols=82 Identities=13% Similarity=0.190 Sum_probs=65.5
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-------------------C----------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-------------------D---------------- 114 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-------------------~---------------- 114 (285)
.+++++|.||++||++|+...|.+.++.+.++ ++.++.+ + .
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 56899999999999999999999999999987 5666554 3 1
Q ss_pred ------hhHHhhhCCCCCCeEEEEc-cccceeecCCC-chhHHHHHHHhhh
Q psy159 115 ------PRYARKWGVTKLPAVVYFR-HRFPSIYRGDL-SEEEEVLQWLITQ 157 (285)
Q Consensus 115 ------~~l~~~~~i~~~Ptl~~~~-~g~~~~y~g~~-~~~~~l~~fi~~~ 157 (285)
..++++|+|.++|+++++. +|+... .|.. +.+ .+.+.+.+.
T Consensus 114 ~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~-~l~~~l~~l 162 (165)
T 3ha9_A 114 IMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLG-ELESVIKSV 162 (165)
T ss_dssp EEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHH-HHHHHHHHC
T ss_pred eEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHH-HHHHHHHHH
Confidence 2789999999999999995 465544 7776 554 788887654
No 271
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.11 E-value=1e-10 Score=90.42 Aligned_cols=74 Identities=16% Similarity=0.388 Sum_probs=59.1
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-------------------------------cChHHHHh
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-------------------------------QDPQLAKR 225 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-------------------------------~~~~~~~~ 225 (285)
.+++++|.||++||++|+.+.|.+++++++++..++.+..+ .+..+++.
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 46889999999999999999999999998864323333221 35678999
Q ss_pred cCCcccCeEEEE-eCCeEE-EEecCCc
Q psy159 226 YSIKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 226 ~~v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
|+|.++|+++++ ++|+.+ .+.|..+
T Consensus 117 ~~v~~~P~~~lid~~G~i~~~~~g~~~ 143 (164)
T 2h30_A 117 LNISVYPSWALIGKDGDVQRIVKGSIN 143 (164)
T ss_dssp TTCCSSSEEEEECTTSCEEEEEESCCC
T ss_pred cCCCccceEEEECCCCcEEEEEcCCCC
Confidence 999999999999 788866 6778765
No 272
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.11 E-value=4.1e-10 Score=86.69 Aligned_cols=88 Identities=11% Similarity=0.232 Sum_probs=67.6
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC----------------------ChhHHhhhCCCCCCeE
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----------------------DPRYARKWGVTKLPAV 129 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~----------------------~~~l~~~~~i~~~Ptl 129 (285)
.+++++|.||++||++|+...|.+.++++.+...++.++.++ ...++++|++.++|++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 468899999999999999999999999999965567776554 2578999999999998
Q ss_pred EEEc-cccc-eeecCCCchh-HHHHHHHhhhcc
Q psy159 130 VYFR-HRFP-SIYRGDLSEE-EEVLQWLITQKT 159 (285)
Q Consensus 130 ~~~~-~g~~-~~y~g~~~~~-~~l~~fi~~~~~ 159 (285)
+++. +|+. ..+.|....+ .++++.+.+...
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHTTC-
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHHhhcc
Confidence 8874 5765 4577754322 367777766543
No 273
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.11 E-value=3e-10 Score=88.32 Aligned_cols=85 Identities=12% Similarity=0.059 Sum_probs=63.3
Q ss_pred hcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe-----------------------C-ChhHHhhhCCCCC
Q psy159 71 EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM-----------------------A-DPRYARKWGVTKL 126 (285)
Q Consensus 71 ~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~-----------------------~-~~~l~~~~~i~~~ 126 (285)
..+++++|.||++||++|+.+.|.++++++. +..+..+.+ | +..++++|+|.++
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 126 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGA 126 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcccc
Confidence 3678999999999999999999999999876 333333332 2 4578899999999
Q ss_pred CeEEEE-ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 127 PAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 127 Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
|+.+++ ++|+. ..+.|..+.+ .+.+++.+.+
T Consensus 127 P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~l 159 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAGDLNPR-VWEEEIKPLW 159 (168)
T ss_dssp SEEEEECTTSBEEEEEESCCCHH-HHHHTTHHHH
T ss_pred CEEEEECCCCeEEEEEeCCCCHH-HHHHHHHHHH
Confidence 965555 56776 4577877765 7777776543
No 274
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.11 E-value=8.8e-10 Score=84.00 Aligned_cols=84 Identities=19% Similarity=0.310 Sum_probs=65.3
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cCh----------------------HHHHhcCCccc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDP----------------------QLAKRYSIKTF 231 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~----------------------~~~~~~~v~~~ 231 (285)
.+++++|.||++||++|+.+.+.+.++.+++.+.++.++.+ ... .+++.|+|.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 36789999999999999999999999999998645777777 222 67888999999
Q ss_pred CeEEEE-eCCeEE-EEecCCccchhHHHHHh
Q psy159 232 PALVYF-RNGNPL-IFEGENKILKGTYIGTY 260 (285)
Q Consensus 232 Ptl~~~-~~g~~~-~y~g~~~~e~~~~~~~~ 260 (285)
|+++++ ++|+.+ .+.|....+...+..++
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i 137 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHH
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHH
Confidence 998888 788766 67776543333333333
No 275
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.08 E-value=8.6e-10 Score=82.08 Aligned_cols=72 Identities=15% Similarity=0.302 Sum_probs=61.1
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c------------------------ChHHHHhcCCcc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q------------------------DPQLAKRYSIKT 230 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~------------------------~~~~~~~~~v~~ 230 (285)
.+++++|.||++||++|+.+.+.++++.+++. ++.++.+ + ...+++.|+|.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 101 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC
Confidence 46789999999999999999999999999987 5777776 1 356889999999
Q ss_pred cCeEEEE-eCCeEEEEecCCc
Q psy159 231 FPALVYF-RNGNPLIFEGENK 250 (285)
Q Consensus 231 ~Ptl~~~-~~g~~~~y~g~~~ 250 (285)
+|+++++ ++|+.+.+.|..+
T Consensus 102 ~P~~~~id~~g~i~~~~g~~~ 122 (136)
T 1zzo_A 102 QPAYAFVDPHGNVDVVRGRMS 122 (136)
T ss_dssp SSEEEEECTTCCEEEEESCCC
T ss_pred CceEEEECCCCCEEEEecCCC
Confidence 9999999 5787667888765
No 276
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.08 E-value=5.2e-10 Score=85.63 Aligned_cols=82 Identities=15% Similarity=0.221 Sum_probs=62.5
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC--------------------------ChhHHhhhCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------DPRYARKWGVTK 125 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--------------------------~~~l~~~~~i~~ 125 (285)
.+++++|.||++||++|+.+.|.+.++++. + ++.++.++ ...++++|++.+
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 117 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD-K--RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG 117 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-T--TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-C--CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc
Confidence 468899999999999999999999998776 3 24444332 346888999999
Q ss_pred CCeEEEE-ccccc-eeecCCCchhHHHHHHHhhh
Q psy159 126 LPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 126 ~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
+|+++++ .+|+. ..+.|..+.+ ++.+++.+.
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~-~l~~~l~~~ 150 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPD-NLRSVLLPQ 150 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHH-HHHHTHHHH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHH-HHHHHHHHH
Confidence 9976666 56766 4578887765 777777654
No 277
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.07 E-value=5.3e-10 Score=79.96 Aligned_cols=68 Identities=15% Similarity=0.364 Sum_probs=55.2
Q ss_pred eEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cChHHHHhcCCcccCeEEEEeCCeEEEEecCCc
Q psy159 180 YLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 250 (285)
Q Consensus 180 ~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~ 250 (285)
..++.|+++||++|+.+.+.+++++.++. ..+....+ +++++..+|+++ +|+++++.+|+.+ +.|..+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-~~g~~~ 98 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-CHYFLD 98 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-ECSSCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-EecCCC
Confidence 46899999999999999999999988864 23333444 688999999997 9999999999876 456654
No 278
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.07 E-value=8.2e-10 Score=84.54 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=60.4
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---Ch-----------------------hHHhhhCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DP-----------------------RYARKWGVTK 125 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~-----------------------~l~~~~~i~~ 125 (285)
.+++++|.||++||++|+...|.+.++.+++++.++.++.++ .. .++++|++.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 457899999999999999999999999999965556666543 22 2889999999
Q ss_pred CCeEEEEc-cccc-eeecCCCchh
Q psy159 126 LPAVVYFR-HRFP-SIYRGDLSEE 147 (285)
Q Consensus 126 ~Ptl~~~~-~g~~-~~y~g~~~~~ 147 (285)
+|+++++. +|+. ..+.|....+
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e 137 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLD 137 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHH
T ss_pred CceEEEECCCCeEEEecCCHHHHH
Confidence 99999995 5766 4566766654
No 279
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.07 E-value=3.7e-10 Score=85.74 Aligned_cols=67 Identities=9% Similarity=0.144 Sum_probs=54.5
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcC-CCCcEEEE--eCC-------------------------hhHHhhhCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETD-NMDITFVK--MAD-------------------------PRYARKWGV 123 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~-~~~v~~~~--~~~-------------------------~~l~~~~~i 123 (285)
.+++++|.||++||++|+.+.|.+.++++.++ ..++.++. +|. ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 46789999999999999999999999999986 23555554 442 368899999
Q ss_pred CCCCeEEEEc--cccce
Q psy159 124 TKLPAVVYFR--HRFPS 138 (285)
Q Consensus 124 ~~~Ptl~~~~--~g~~~ 138 (285)
.++|+++++. +|+.+
T Consensus 107 ~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVV 123 (146)
T ss_dssp CSSSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCeEE
Confidence 9999999997 56553
No 280
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.07 E-value=1.2e-09 Score=84.47 Aligned_cols=74 Identities=20% Similarity=0.354 Sum_probs=61.1
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChHHHHhc---------------------------
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRY--------------------------- 226 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~--------------------------- 226 (285)
.+++++|.||++||++|+.+.|.+.++.+++.+.++.++.+ ......++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 46899999999999999999999999999998645888887 345555555
Q ss_pred CCcccCeEEEE-eCCeEE-EEecCCc
Q psy159 227 SIKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 227 ~v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
++.++|+++++ ++|+.+ .+.|..+
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~ 138 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRS 138 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCC
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCC
Confidence 89999999988 688866 6678765
No 281
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.06 E-value=1.4e-09 Score=83.40 Aligned_cols=73 Identities=12% Similarity=0.244 Sum_probs=60.5
Q ss_pred CCeEEEEEECCCChhhHHH-HHHHHHHHhhcCcCCeEEEEEcC-------------------------------h-----
Q psy159 178 TQYLAVYFYKLNCNICDQI-LEGLEKVDDECDIYGIHMVKIQD-------------------------------P----- 220 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~-~~~~~~la~~~~~~~i~~~~i~~-------------------------------~----- 220 (285)
+++++|.||++||++|+.. .|.+.++.+++++.++.+..+.. .
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 6899999999999999995 99999999999854677776521 1
Q ss_pred HHHHhcCCcccCeEEEE-eCCeEE-EEecCCc
Q psy159 221 QLAKRYSIKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 221 ~~~~~~~v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
.+++.|+|.++|+++++ ++|+.+ .+.|..+
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 139 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVS 139 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCC
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCC
Confidence 58899999999999998 688866 6778765
No 282
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.06 E-value=4e-10 Score=85.25 Aligned_cols=68 Identities=10% Similarity=0.063 Sum_probs=55.0
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC-CCcEEEE--eCC-------------------------hhHHhhhCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFVK--MAD-------------------------PRYARKWGV 123 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~-~~v~~~~--~~~-------------------------~~l~~~~~i 123 (285)
.+++++|.||++||++|+.+.|.+.++++.++. .++.++. +|. ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 467899999999999999999999999999863 3555554 442 468899999
Q ss_pred CCCCeEEEEc--ccccee
Q psy159 124 TKLPAVVYFR--HRFPSI 139 (285)
Q Consensus 124 ~~~Ptl~~~~--~g~~~~ 139 (285)
.++|+++++. +|+.+.
T Consensus 107 ~~~P~~~lid~~~G~i~~ 124 (144)
T 1i5g_A 107 KSIPTLVGVEADSGNIIT 124 (144)
T ss_dssp CSSSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCcEEe
Confidence 9999999996 565533
No 283
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.06 E-value=4.4e-10 Score=84.92 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=54.8
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcC-CCCcEEEE--eCC-------------------------hhHHhhhCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETD-NMDITFVK--MAD-------------------------PRYARKWGV 123 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~-~~~v~~~~--~~~-------------------------~~l~~~~~i 123 (285)
.+++++|.||++||++|+.+.|.+.+++++++ ..++.++. +|. ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 46789999999999999999999999999885 33455554 442 358889999
Q ss_pred CCCCeEEEEc--ccccee
Q psy159 124 TKLPAVVYFR--HRFPSI 139 (285)
Q Consensus 124 ~~~Ptl~~~~--~g~~~~ 139 (285)
.++|+++++. +|+.+.
T Consensus 107 ~~~Pt~~lid~~~G~i~~ 124 (144)
T 1o73_A 107 ESIPTLITINADTGAIIG 124 (144)
T ss_dssp CSSSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCeEEe
Confidence 9999999998 565543
No 284
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.06 E-value=6.9e-10 Score=86.24 Aligned_cols=66 Identities=9% Similarity=0.165 Sum_probs=54.4
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCC-CCcEEEE--eC-C------------------------hhHHhhhCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFVK--MA-D------------------------PRYARKWGV 123 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~-~~v~~~~--~~-~------------------------~~l~~~~~i 123 (285)
.+++++|.||++||++|+.+.|.+.+++++++. .++.++. +| . ..++++|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 468999999999999999999999999999954 4555554 34 2 578999999
Q ss_pred CCCCeEEEEcc--ccc
Q psy159 124 TKLPAVVYFRH--RFP 137 (285)
Q Consensus 124 ~~~Ptl~~~~~--g~~ 137 (285)
.++|+++++.. |+.
T Consensus 127 ~~~Pt~~lid~~~G~i 142 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDT 142 (165)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEeCCCCEE
Confidence 99999999984 544
No 285
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.06 E-value=1.1e-09 Score=83.56 Aligned_cols=74 Identities=15% Similarity=0.386 Sum_probs=61.7
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--------------------------cChHHHHhcCCcc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--------------------------QDPQLAKRYSIKT 230 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--------------------------~~~~~~~~~~v~~ 230 (285)
.+++++|.||++||++|+.+.+.+.++.+++.+.++.+..+ ....+++.|+|.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 46899999999999999999999999999988644666543 2567899999999
Q ss_pred cCeEEEE-eCCeEE-EEecCCc
Q psy159 231 FPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 231 ~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
+|+++++ ++|+.+ .|.|..+
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~ 128 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPD 128 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCC
T ss_pred cCeEEEECCCCcEEEEEcCCCC
Confidence 9999999 688765 6788664
No 286
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.04 E-value=2.3e-09 Score=81.82 Aligned_cols=74 Identities=18% Similarity=0.323 Sum_probs=60.8
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--cC------------------------hHHHHhcCCcc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--QD------------------------PQLAKRYSIKT 230 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~~------------------------~~~~~~~~v~~ 230 (285)
.+++++|.||++||++|+...+.+.++.+++.+.++.+..+ +. ..+++.|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 46899999999999999999999999999998656778777 22 23888999999
Q ss_pred cCeEEEE-eCCeEE-EEecCCc
Q psy159 231 FPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 231 ~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
+|+++++ ++|+.+ .+.|...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~ 128 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAME 128 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCC
T ss_pred CCeEEEECCCCcEEEEEcCCCc
Confidence 9977777 688866 6778764
No 287
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.03 E-value=2.9e-10 Score=95.84 Aligned_cols=76 Identities=16% Similarity=0.261 Sum_probs=57.2
Q ss_pred HHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-c---ChHHHHhcCCcccCeEEEEeCCeEE
Q psy159 168 RVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-Q---DPQLAKRYSIKTFPALVYFRNGNPL 243 (285)
Q Consensus 168 ~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~---~~~~~~~~~v~~~Ptl~~~~~g~~~ 243 (285)
...+.+.+++.. +++||||||+||+++.|.+++++++++ .+.+.++ . +++++++++|+++||+++ +|+
T Consensus 189 ~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~--~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~-- 260 (291)
T 3kp9_A 189 AVGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVP--YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR-- 260 (291)
T ss_dssp HHHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSC--EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE--
T ss_pred HHHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcC--EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE--
Confidence 344555565544 589999999999999999999997764 2332222 1 689999999999999554 887
Q ss_pred EEecCCcc
Q psy159 244 IFEGENKI 251 (285)
Q Consensus 244 ~y~g~~~~ 251 (285)
.|.|.++.
T Consensus 261 ~~~G~~~~ 268 (291)
T 3kp9_A 261 TYTGVRSL 268 (291)
T ss_dssp EEESCCCH
T ss_pred EecCCCCH
Confidence 48998864
No 288
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.03 E-value=1.9e-09 Score=80.12 Aligned_cols=73 Identities=15% Similarity=0.403 Sum_probs=60.9
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-------------------------------cChHHHHh
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-------------------------------QDPQLAKR 225 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-------------------------------~~~~~~~~ 225 (285)
.+++++|.||++||++|+...+.++++.+++.. ++.+..+ ....+++.
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 468899999999999999999999999998664 5666655 13468899
Q ss_pred cCCcccCeEEEE-eCCeEE-EEecCCc
Q psy159 226 YSIKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 226 ~~v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
|++.++|+++++ ++|+.+ .+.|..+
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~~g~~~ 126 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTHPGFME 126 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEEESCCC
T ss_pred cCcccCCeEEEECCCCcEEEeecCCCc
Confidence 999999999999 788865 7778765
No 289
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.03 E-value=1e-09 Score=86.54 Aligned_cols=86 Identities=15% Similarity=0.247 Sum_probs=64.9
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCc------EEEEeC--C--hhHHhhh--------------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDI------TFVKMA--D--PRYARKW-------------------- 121 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v------~~~~~~--~--~~l~~~~-------------------- 121 (285)
.+++++|.||++||++|+...|.+.++.+.++..++ .++.++ . +..+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 468899999999999999999999999999854445 666544 3 5556655
Q ss_pred -----CCCCCCeEEEEc-cccc-eeecCCCchhHHHHHHHhhhc
Q psy159 122 -----GVTKLPAVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 122 -----~i~~~Ptl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++.++|+++++. +|+. ..+.|..+.+ ++.+++.+.+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~ll 180 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSK-DVLDVALPLV 180 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHH-HHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHH-HHHHHHHHHH
Confidence 688999777764 5766 4578887765 7888887643
No 290
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.02 E-value=6.3e-10 Score=84.23 Aligned_cols=73 Identities=19% Similarity=0.302 Sum_probs=61.1
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cChH-------------------------HHHhcCC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQ-------------------------LAKRYSI 228 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~-------------------------~~~~~~v 228 (285)
.+++++|.||++||++|+.+.|.+.++.+++.+.++.++.+ .... +++.|+|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 46889999999999999999999999999998645888887 3444 8999999
Q ss_pred cccCeEEEE-eCCeEE-EEecCC
Q psy159 229 KTFPALVYF-RNGNPL-IFEGEN 249 (285)
Q Consensus 229 ~~~Ptl~~~-~~g~~~-~y~g~~ 249 (285)
.++|+++++ ++|+.+ .+.|..
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~ 132 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYE 132 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGG
T ss_pred CCCCEEEEECCCCcEEEecCCHH
Confidence 999999999 688765 555553
No 291
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.02 E-value=5e-10 Score=81.56 Aligned_cols=83 Identities=20% Similarity=0.179 Sum_probs=57.5
Q ss_pred hHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---C-----hhHHhhhCCCCCCeEEEEccc
Q psy159 64 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---D-----PRYARKWGVTKLPAVVYFRHR 135 (285)
Q Consensus 64 ~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~-----~~l~~~~~i~~~Ptl~~~~~g 135 (285)
+.++.++.. +++++ ||++||++|+.+.|.+++++.. +.++.++ . ..+++++++.++|++ |.+|
T Consensus 11 ~~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g 81 (116)
T 2e7p_A 11 KKAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGG 81 (116)
T ss_dssp HHHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETT
T ss_pred HHHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECC
Confidence 345555544 45655 9999999999999999988543 4667766 2 358999999999999 4577
Q ss_pred cce-eecCCC---chhHHHHHHHhh
Q psy159 136 FPS-IYRGDL---SEEEEVLQWLIT 156 (285)
Q Consensus 136 ~~~-~y~g~~---~~~~~l~~fi~~ 156 (285)
+.+ .+.|.. ..+ .|.+++.+
T Consensus 82 ~~v~~~~~~~~~~~~~-~l~~~l~~ 105 (116)
T 2e7p_A 82 KQIGGCDTVVEKHQRN-ELLPLLQD 105 (116)
T ss_dssp EEEECHHHHHHHHHTT-CHHHHHHH
T ss_pred EEECChHHHHHHHhCC-hHHHHHHH
Confidence 653 344332 332 56677655
No 292
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.01 E-value=9.1e-10 Score=95.78 Aligned_cols=86 Identities=7% Similarity=0.005 Sum_probs=68.9
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC------------------------------ChhHHhhh
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA------------------------------DPRYARKW 121 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~------------------------------~~~l~~~~ 121 (285)
.+++++|.||++||++|+.+.|.+.+++++++..++.++.++ +..++++|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 468999999999999999999999999999965556666552 25789999
Q ss_pred CCCCCCeEEEE-ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 122 GVTKLPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 122 ~i~~~Ptl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+|.++|+++++ ++|+. ..+.|..+.+ ++.++|.+.+
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~~~~-~l~~~I~~lL 198 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEGDYN-VTETLVRQLL 198 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBCCHH-HHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCCCHH-HHHHHHHHHH
Confidence 99999999988 45766 4577877664 7888877654
No 293
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.01 E-value=3.2e-09 Score=81.55 Aligned_cols=74 Identities=15% Similarity=0.318 Sum_probs=60.9
Q ss_pred hCCeEEEEEECCCChhhHH-HHHHHHHHHhhcCcCCeEEEEEc-------------------------------ChH---
Q psy159 177 ETQYLAVYFYKLNCNICDQ-ILEGLEKVDDECDIYGIHMVKIQ-------------------------------DPQ--- 221 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~-~~~~~~~la~~~~~~~i~~~~i~-------------------------------~~~--- 221 (285)
.+++++|.||++||++|+. +.|.++++.+++++.++.+..+. ...
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 3689999999999999999 69999999999986457776652 122
Q ss_pred ---HHHhcCCcccCeEEEE-eCCeEE-EEecCCc
Q psy159 222 ---LAKRYSIKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 222 ---~~~~~~v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
+++.|+|.++|+++++ ++|+.+ .+.|..+
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 142 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVD 142 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCC
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCC
Confidence 8899999999999999 478766 6778765
No 294
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.01 E-value=9.8e-10 Score=75.76 Aligned_cols=61 Identities=25% Similarity=0.423 Sum_probs=49.0
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cChHHHHhcCCcccCeEEEEeCCeEEEEecCCc
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 250 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~ 250 (285)
++.|+++||++|+.+.|.+++++.++ ..-..+ +++.++++|+++ +|++++ .+|+.+. |..+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~--g~~~ 64 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD--WPFD 64 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE--SCCC
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe--CCCC
Confidence 68899999999999999999987552 122333 688999999998 999998 8898763 6654
No 295
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.00 E-value=2e-09 Score=81.35 Aligned_cols=68 Identities=18% Similarity=0.259 Sum_probs=57.0
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc-CCeEEEEE--cC-------------------------hHHHHhcCC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI--QD-------------------------PQLAKRYSI 228 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i--~~-------------------------~~~~~~~~v 228 (285)
.+++++|.||++||++|+.+.|.++++++++++ .++.++.+ +. ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 367899999999999999999999999999983 35777777 21 468899999
Q ss_pred cccCeEEEEe--CCeEEE
Q psy159 229 KTFPALVYFR--NGNPLI 244 (285)
Q Consensus 229 ~~~Ptl~~~~--~g~~~~ 244 (285)
.++|+++++. +|+.+.
T Consensus 107 ~~~P~~~lid~~~G~i~~ 124 (144)
T 1i5g_A 107 KSIPTLVGVEADSGNIIT 124 (144)
T ss_dssp CSSSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCcEEe
Confidence 9999999996 787653
No 296
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.00 E-value=1.1e-09 Score=83.52 Aligned_cols=74 Identities=16% Similarity=0.390 Sum_probs=60.6
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cCh-----------------------HHHHhcCCcc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDP-----------------------QLAKRYSIKT 230 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~-----------------------~~~~~~~v~~ 230 (285)
.+++++|.||++||++|+.+.+.+.++.+++.+.++.++.+ ... .+++.|+|.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 36789999999999999999999999999988645888777 222 6889999999
Q ss_pred cCeEEEEe-CCeEE-EEecCCc
Q psy159 231 FPALVYFR-NGNPL-IFEGENK 250 (285)
Q Consensus 231 ~Ptl~~~~-~g~~~-~y~g~~~ 250 (285)
+|+++++. +|+.+ .+.|..+
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~ 130 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPS 130 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTT
T ss_pred CCEEEEECCCCeEEEccCCCCC
Confidence 99999996 78766 3456544
No 297
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.00 E-value=4.7e-09 Score=80.06 Aligned_cols=67 Identities=19% Similarity=0.380 Sum_probs=58.0
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c--------------------------ChHHHHhcCC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q--------------------------DPQLAKRYSI 228 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~--------------------------~~~~~~~~~v 228 (285)
.+++++|.||++||++|+...|.+.++.+++.+.++.+..+ + ...+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 36789999999999999999999999999998645888877 2 3678899999
Q ss_pred cccCeEEEE-eCCeEE
Q psy159 229 KTFPALVYF-RNGNPL 243 (285)
Q Consensus 229 ~~~Ptl~~~-~~g~~~ 243 (285)
.++|+++++ ++|+.+
T Consensus 108 ~~~P~~~lid~~G~i~ 123 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIV 123 (152)
T ss_dssp CSSCEEEEECTTSEEE
T ss_pred CcCCeEEEECCCCeEE
Confidence 999999999 688765
No 298
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.00 E-value=2e-09 Score=83.62 Aligned_cols=68 Identities=18% Similarity=0.396 Sum_probs=57.0
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc-CCeEEEEE---cC------------------------hHHHHhcCC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI---QD------------------------PQLAKRYSI 228 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i---~~------------------------~~~~~~~~v 228 (285)
.+++++|+||++||++|+.+.|.+.++.+++++ .++.++.+ .. ..+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 368999999999999999999999999999984 35777766 22 578999999
Q ss_pred cccCeEEEEe-C-CeEEE
Q psy159 229 KTFPALVYFR-N-GNPLI 244 (285)
Q Consensus 229 ~~~Ptl~~~~-~-g~~~~ 244 (285)
.++|+++++. + |+.+.
T Consensus 127 ~~~Pt~~lid~~~G~iv~ 144 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTVT 144 (165)
T ss_dssp CSSSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEeCCCCEEEe
Confidence 9999999997 3 76553
No 299
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.99 E-value=7.7e-09 Score=76.18 Aligned_cols=103 Identities=9% Similarity=0.083 Sum_probs=83.1
Q ss_pred hhcCCCcccccceeec-ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCChhHHhhhCCC
Q psy159 46 LTSQDVFEIKNEIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVT 124 (285)
Q Consensus 46 i~~~~~p~~~~~v~~l-~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~~~l~~~~~i~ 124 (285)
++++..|+. .+..+ +.+.++.++.+.+.++|-|+++||+.| .+.|.++|+.+ .++.|+.++++++++++++.
T Consensus 13 m~kq~gP~~--~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~--~d~~F~~t~~~~v~~~~~v~ 85 (124)
T 2l4c_A 13 SSDGPGAAQ--EPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF--PGVSFGISTDSEVLTHYNIT 85 (124)
T ss_dssp SCCCSCCSC--CCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC--TTSEEEEECCHHHHHHTTCC
T ss_pred HHhccCCCC--cceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC--CCceEEEEChHHHHHHcCCC
Confidence 345556652 13335 678899999888899999999999998 67899999998 34899999999999999998
Q ss_pred CCCeEEEEcccc--ceeecC----CCchhHHHHHHHhhh
Q psy159 125 KLPAVVYFRHRF--PSIYRG----DLSEEEEVLQWLITQ 157 (285)
Q Consensus 125 ~~Ptl~~~~~g~--~~~y~g----~~~~~~~l~~fi~~~ 157 (285)
.|++.+|+++. ...|.| ..+.+ +|.+||..+
T Consensus 86 -~~~vvlfkkfde~~~~~~g~~~~~~~~~-~L~~FI~~n 122 (124)
T 2l4c_A 86 -GNTICLFRLVDNEQLNLEDEDIESIDAT-KLSRFIEIN 122 (124)
T ss_dssp -SSCEEEEETTTTEEEEECHHHHTTCCHH-HHHHHHHHH
T ss_pred -CCeEEEEEcCCCCceeecCcccCCCCHH-HHHHHHHHh
Confidence 89999999854 467886 56665 899999865
No 300
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.99 E-value=2e-09 Score=81.34 Aligned_cols=81 Identities=11% Similarity=0.079 Sum_probs=60.1
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-C--------------------------hhHHhhhC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-D--------------------------PRYARKWG 122 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-~--------------------------~~l~~~~~ 122 (285)
.+++++|.||++||++|+...|.+.++.++++..++.++.+ | . ..+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 45789999999999999999999999999996556666644 2 1 25778899
Q ss_pred CCCCCeEEEEcc-ccceeecCCCchhHHHHHHHh
Q psy159 123 VTKLPAVVYFRH-RFPSIYRGDLSEEEEVLQWLI 155 (285)
Q Consensus 123 i~~~Ptl~~~~~-g~~~~y~g~~~~~~~l~~fi~ 155 (285)
|.++|+.+++.. |+. .+.+. .. +++.+.+.
T Consensus 111 v~~~P~~~lid~~G~i-~~~~~-~~-~~l~~~l~ 141 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVI-IAANV-TP-EKLTEILK 141 (143)
T ss_dssp GGGCCCEEEECTTSBE-EEESC-CH-HHHHHHHT
T ss_pred CCCCCcEEEECCCCEE-EEccC-CH-HHHHHHHH
Confidence 999999999874 554 33322 23 25666654
No 301
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.99 E-value=2.4e-09 Score=81.11 Aligned_cols=68 Identities=16% Similarity=0.305 Sum_probs=56.9
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc-CCeEEEEE--cC-------------------------hHHHHhcCC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI--QD-------------------------PQLAKRYSI 228 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i--~~-------------------------~~~~~~~~v 228 (285)
.+++++|.||++||++|+.+.|.++++++++.+ .++.+..+ +. ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 368899999999999999999999999999983 35777776 21 468899999
Q ss_pred cccCeEEEEe--CCeEEE
Q psy159 229 KTFPALVYFR--NGNPLI 244 (285)
Q Consensus 229 ~~~Ptl~~~~--~g~~~~ 244 (285)
.++|+++++. +|+.+.
T Consensus 107 ~~~Pt~~lid~~~G~i~~ 124 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVVT 124 (146)
T ss_dssp CSSSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCeEEE
Confidence 9999999997 787653
No 302
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.99 E-value=2.3e-09 Score=84.16 Aligned_cols=84 Identities=12% Similarity=0.033 Sum_probs=62.9
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe-----------------------C-ChhHHhhhCCCCCC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM-----------------------A-DPRYARKWGVTKLP 127 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~-----------------------~-~~~l~~~~~i~~~P 127 (285)
.+++++|.||++||++|+...|.+.+++++ +..+..+.+ | +..+++.|++.++|
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 134 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAP 134 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCC
Confidence 468899999999999999999999999876 222333332 1 45688899999999
Q ss_pred eEEEEc-cccc-eeecCCCchhHHHHHHHhhhc
Q psy159 128 AVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 128 tl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+++++. +|+. ..+.|..+.+ .+.+++.+.+
T Consensus 135 ~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~l 166 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVVDQK-VWREQLAPLY 166 (176)
T ss_dssp EEEEECTTCBEEEEEESCCCHH-HHHHHTHHHH
T ss_pred eEEEECCCCeEEEEEcCCCCHH-HHHHHHHHHH
Confidence 888875 5765 4577887765 7777776543
No 303
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.98 E-value=1.9e-09 Score=81.42 Aligned_cols=70 Identities=17% Similarity=0.338 Sum_probs=57.6
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCc-CCeEEEEE--c-------------------------ChHHHHhcCC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI--Q-------------------------DPQLAKRYSI 228 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i--~-------------------------~~~~~~~~~v 228 (285)
.+++++|.||++||++|+.+.|.+.++++++++ .++.+..+ + ...+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 368999999999999999999999999999872 25777766 2 1358899999
Q ss_pred cccCeEEEEe--CCeEEEEe
Q psy159 229 KTFPALVYFR--NGNPLIFE 246 (285)
Q Consensus 229 ~~~Ptl~~~~--~g~~~~y~ 246 (285)
.++|+++++. +|+.+...
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 107 ESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CSSSEEEEEETTTCCEEESC
T ss_pred CCCCEEEEEECCCCeEEecc
Confidence 9999999998 78766443
No 304
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.98 E-value=2e-09 Score=82.32 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=61.6
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cCh-----------------------HHHHhcCCcc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDP-----------------------QLAKRYSIKT 230 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~-----------------------~~~~~~~v~~ 230 (285)
.+++++|.||++||++|+...|.+.++.+++++.++.+..+ ... .+.+.|++.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 35789999999999999999999999999998645788777 222 2888999999
Q ss_pred cCeEEEE-eCCeEE-EEecCCccc
Q psy159 231 FPALVYF-RNGNPL-IFEGENKIL 252 (285)
Q Consensus 231 ~Ptl~~~-~~g~~~-~y~g~~~~e 252 (285)
+|+++++ ++|+.+ .+.|....+
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e 137 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLD 137 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHH
T ss_pred CceEEEECCCCeEEEecCCHHHHH
Confidence 9999999 588866 556765433
No 305
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.98 E-value=3.1e-09 Score=81.13 Aligned_cols=71 Identities=20% Similarity=0.420 Sum_probs=57.3
Q ss_pred CeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE----------------------------cChHHHHhcCCcc
Q psy159 179 QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI----------------------------QDPQLAKRYSIKT 230 (285)
Q Consensus 179 ~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i----------------------------~~~~~~~~~~v~~ 230 (285)
++++|.||++||++|+...+.+.++.+++ +..+..+.+ ....+++.|++.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG 109 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc
Confidence 78999999999999999999999999998 433333333 2366889999999
Q ss_pred cCeEEEE-eCCeEE-EEecCCc
Q psy159 231 FPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 231 ~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
+|+++++ ++|+.+ .+.|..+
T Consensus 110 ~P~~~lid~~G~i~~~~~g~~~ 131 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGRAG 131 (154)
T ss_dssp SCEEEEECTTSEEEEEEESBCC
T ss_pred ccEEEEECCCCCEEEEEcCCCC
Confidence 9998888 688866 7778765
No 306
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.98 E-value=2.6e-09 Score=80.79 Aligned_cols=67 Identities=24% Similarity=0.423 Sum_probs=57.5
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhc-CcCCeEEEEE---c-------------------------ChHHHHhcC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDEC-DIYGIHMVKI---Q-------------------------DPQLAKRYS 227 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~-~~~~i~~~~i---~-------------------------~~~~~~~~~ 227 (285)
.+++++|.||++||++|+.+.|.+.++.+++ .+.++.+..+ . ...+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4689999999999999999999999999999 6545888877 2 347899999
Q ss_pred CcccCeEEEE-eCCeEE
Q psy159 228 IKTFPALVYF-RNGNPL 243 (285)
Q Consensus 228 v~~~Ptl~~~-~~g~~~ 243 (285)
|.++|+++++ ++|+.+
T Consensus 112 v~~~P~~~lid~~G~i~ 128 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKIL 128 (148)
T ss_dssp CCSSSEEEEECTTSBEE
T ss_pred CCCcCEEEEECCCCeEE
Confidence 9999999999 678755
No 307
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.97 E-value=4.2e-09 Score=80.19 Aligned_cols=82 Identities=15% Similarity=0.197 Sum_probs=62.3
Q ss_pred cCCcEEEEEeCCCChh--HHHHHHHHHhHHhhc-CCCCcEEEEe--C-Ch-------------------------hHHhh
Q psy159 72 ENEFVTVFFYETDHKD--SVKVLERLEKIDGET-DNMDITFVKM--A-DP-------------------------RYARK 120 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~--C~~~~~~~~~~a~~~-~~~~v~~~~~--~-~~-------------------------~l~~~ 120 (285)
.+++++|.||++||++ |+...|.+.++.+++ ++.++.++.+ | .+ .+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4689999999999999 999999999999999 6666766654 3 22 68899
Q ss_pred hCCCCCCeEEEEc-cccceeecCCCchhHHHHHHHhh
Q psy159 121 WGVTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 121 ~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~~l~~fi~~ 156 (285)
|++.++|+++++. +|+... ... .. +++.+.+.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~~-~~~-~~-~~l~~~l~~ 145 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILA-KNL-RG-EELKKKIEN 145 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEE-ESC-CH-HHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEE-ccC-CH-HHHHHHHHH
Confidence 9999999999995 565532 222 33 356666654
No 308
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.97 E-value=2.8e-09 Score=81.50 Aligned_cols=89 Identities=10% Similarity=0.109 Sum_probs=64.3
Q ss_pred HHHHhcCCcEEEEEeCCCChhHHHHHHHH---HhHHhhcCCCCcEEEEeC-----ChhHHhhhCCCCCCeEEEEcc--cc
Q psy159 67 DKLLEENEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA-----DPRYARKWGVTKLPAVVYFRH--RF 136 (285)
Q Consensus 67 ~~~~~~~~~~lv~Fya~~c~~C~~~~~~~---~~~a~~~~~~~v~~~~~~-----~~~l~~~~~i~~~Ptl~~~~~--g~ 136 (285)
...-..+++++|.||++||..|+.|.... .++++.++. ++.++++| ...++++|++.++|+++++.. |+
T Consensus 36 ~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~ 114 (153)
T 2dlx_A 36 ECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQ 114 (153)
T ss_dssp HHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCC
T ss_pred HHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCc
Confidence 33345689999999999999999997654 556655532 37777765 346889999999999999975 54
Q ss_pred c-eeecCCCchhHHHHHHHhhhc
Q psy159 137 P-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 137 ~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
. ..+.| .+.+ ++++++.+..
T Consensus 115 ~l~~~~g-~~~~-~fl~~L~~~l 135 (153)
T 2dlx_A 115 KLVEWHQ-LDVS-SFLDQVTGFL 135 (153)
T ss_dssp CCEEESS-CCHH-HHHHHHHHHH
T ss_pred EeeecCC-CCHH-HHHHHHHHHH
Confidence 4 33545 6554 7877776543
No 309
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.94 E-value=3.1e-09 Score=84.65 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=65.2
Q ss_pred cCC-cEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC--------------------------------ChhHH
Q psy159 72 ENE-FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------------DPRYA 118 (285)
Q Consensus 72 ~~~-~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--------------------------------~~~l~ 118 (285)
.++ +++|.||++||++|+...|.+.++.+++...++.++.++ +..++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 345 599999999999999999999999998855455555432 34688
Q ss_pred hhhCCCCCCeEEEEc-cccce-e---------ecCCCchhHHHHHHHhhhcc
Q psy159 119 RKWGVTKLPAVVYFR-HRFPS-I---------YRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 119 ~~~~i~~~Ptl~~~~-~g~~~-~---------y~g~~~~~~~l~~fi~~~~~ 159 (285)
++|++.++|+++++. +|+.. . +.|..+.+ ++.+.|.+.+.
T Consensus 124 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~-~l~~~i~~ll~ 174 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGE-SIRAALDALLE 174 (196)
T ss_dssp HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCH-HHHHHHHHHHH
T ss_pred HHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHH-HHHHHHHHHHc
Confidence 999999999999995 56553 2 23555554 78888776553
No 310
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.94 E-value=9.9e-10 Score=74.53 Aligned_cols=64 Identities=17% Similarity=0.148 Sum_probs=50.2
Q ss_pred EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC----ChhHHhhhCCCCCCeEEEEccccceeecCCC
Q psy159 77 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----DPRYARKWGVTKLPAVVYFRHRFPSIYRGDL 144 (285)
Q Consensus 77 lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~----~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~ 144 (285)
++.|+++||++|+.+.+.++++++..+. .+.++.++ ..++++++|+.+.|++++ +|+.. +.|..
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~-~~G~~ 71 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF-HINFG 71 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE-EEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE-EeccC
Confidence 6889999999999999999998766532 36777776 567899999999999877 66543 34443
No 311
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.93 E-value=7.3e-09 Score=81.79 Aligned_cols=88 Identities=14% Similarity=0.231 Sum_probs=65.5
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-C-----hhHHhhhCCC-------------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-D-----PRYARKWGVT------------------- 124 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-~-----~~l~~~~~i~------------------- 124 (285)
.+++++|.||++||++|+...|.+.++.++++..++.++.+ | . ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 46789999999999999999999999999996555666544 3 2 3456677764
Q ss_pred ----CCCeEEEEc-cccc-eeecCCCc-hhHHHHHHHhhhcc
Q psy159 125 ----KLPAVVYFR-HRFP-SIYRGDLS-EEEEVLQWLITQKT 159 (285)
Q Consensus 125 ----~~Ptl~~~~-~g~~-~~y~g~~~-~~~~l~~fi~~~~~ 159 (285)
++|+++++. +|+. ..+.|... ..+++.+++...+.
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhc
Confidence 899999994 5765 45777654 12378888876553
No 312
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.92 E-value=6.5e-09 Score=80.37 Aligned_cols=70 Identities=16% Similarity=0.411 Sum_probs=59.5
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-------------------C----------------
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-------------------D---------------- 219 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-------------------~---------------- 219 (285)
.+++++|.||++||++|+...|.+.++.+++. ++.|..+ + .
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 46899999999999999999999999999988 5788777 3 1
Q ss_pred ------hHHHHhcCCcccCeEEEE-eCCeEEEEecCC
Q psy159 220 ------PQLAKRYSIKTFPALVYF-RNGNPLIFEGEN 249 (285)
Q Consensus 220 ------~~~~~~~~v~~~Ptl~~~-~~g~~~~y~g~~ 249 (285)
..+++.|+|.++|+++++ ++|+.+. .|..
T Consensus 114 ~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~ 149 (165)
T 3ha9_A 114 IMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTT 149 (165)
T ss_dssp EEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEES
T ss_pred eEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCC
Confidence 278899999999999999 5777655 6666
No 313
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.90 E-value=2.1e-09 Score=72.87 Aligned_cols=64 Identities=20% Similarity=0.400 Sum_probs=51.0
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc----ChHHHHhcCCcccCeEEEEeCCeEEEEecCC
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ----DPQLAKRYSIKTFPALVYFRNGNPLIFEGEN 249 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~----~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~ 249 (285)
++.|+++||++|+.+.+.++++++++.. .+.+..++ ..++++++++.++|++++ +|+.+ +.|..
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~-~~G~~ 71 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF-HINFG 71 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE-EEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE-EeccC
Confidence 6789999999999999999999877653 46666762 577889999999999887 88743 45543
No 314
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.90 E-value=5.2e-09 Score=78.71 Aligned_cols=67 Identities=15% Similarity=0.406 Sum_probs=53.1
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHH---HHhhcCcCCeEEEEE---cChHH------------------------HHhc
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEK---VDDECDIYGIHMVKI---QDPQL------------------------AKRY 226 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~---la~~~~~~~i~~~~i---~~~~~------------------------~~~~ 226 (285)
.+++++|.||++||++|+...|.+.+ +.+++++.++.+..+ ..... .+.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 36899999999999999999999888 888887545777777 22222 3389
Q ss_pred CCcccCeEEEE-eCCeEE
Q psy159 227 SIKTFPALVYF-RNGNPL 243 (285)
Q Consensus 227 ~v~~~Ptl~~~-~~g~~~ 243 (285)
+|.++|+++++ ++|+.+
T Consensus 106 ~v~~~P~~~lid~~G~i~ 123 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRVI 123 (142)
T ss_dssp CCCSSSEEEEECTTCBEE
T ss_pred CCCCCCeEEEECCCCCEE
Confidence 99999999999 577654
No 315
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.41 E-value=1.7e-10 Score=86.99 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=54.9
Q ss_pred cCC-cEEEEEeCCCChhHHHHHHHHHhHHhhcC--CCCcEEEE--eC-C-------------------------hhHHhh
Q psy159 72 ENE-FVTVFFYETDHKDSVKVLERLEKIDGETD--NMDITFVK--MA-D-------------------------PRYARK 120 (285)
Q Consensus 72 ~~~-~~lv~Fya~~c~~C~~~~~~~~~~a~~~~--~~~v~~~~--~~-~-------------------------~~l~~~ 120 (285)
.++ +++|.||++||++|+.+.|.+.++++.++ +.++.++. +| . ..++++
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 345 89999999999999999999999998882 22344443 33 2 368899
Q ss_pred hCCCCCCeEEEEc-cccceeecCC
Q psy159 121 WGVTKLPAVVYFR-HRFPSIYRGD 143 (285)
Q Consensus 121 ~~i~~~Ptl~~~~-~g~~~~y~g~ 143 (285)
|+|.++|+++++. +|+.....|.
T Consensus 104 ~~v~~~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLISMNGR 127 (143)
Confidence 9999999999998 5766544443
No 316
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.89 E-value=8.7e-09 Score=78.67 Aligned_cols=70 Identities=14% Similarity=0.245 Sum_probs=56.3
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--------------------------cChHHHHhcCCccc
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--------------------------QDPQLAKRYSIKTF 231 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--------------------------~~~~~~~~~~v~~~ 231 (285)
+++++|.||++||++|+.+.|.++++.++ . ++.+..+ ....+++.|++.++
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD-K--RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC-T--TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc-C--CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 67899999999999999999999999877 2 4566555 13468889999999
Q ss_pred CeEEEE-eCCeEE-EEecCCc
Q psy159 232 PALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 232 Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
|+++++ ++|+.+ .+.|..+
T Consensus 119 P~~~~id~~G~i~~~~~g~~~ 139 (156)
T 1kng_A 119 PETFVVGREGTIVYKLVGPIT 139 (156)
T ss_dssp CEEEEECTTSBEEEEEESCCC
T ss_pred CeEEEEcCCCCEEEEEeCCCC
Confidence 976666 788866 6778765
No 317
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.88 E-value=4.9e-09 Score=83.01 Aligned_cols=85 Identities=14% Similarity=0.243 Sum_probs=63.7
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC--------------------------------ChhHHh
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--------------------------------~~~l~~ 119 (285)
.+++++|.||++||++|+...|.+.++.++++.. +.++.++ +..+++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 110 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAK 110 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHH
Confidence 4588999999999999999999999999999654 5555442 346889
Q ss_pred hhCCCCCCeEEEEc-cccceeecCCC----------chhHHHHHHHhhhcc
Q psy159 120 KWGVTKLPAVVYFR-HRFPSIYRGDL----------SEEEEVLQWLITQKT 159 (285)
Q Consensus 120 ~~~i~~~Ptl~~~~-~g~~~~y~g~~----------~~~~~l~~fi~~~~~ 159 (285)
.|++.++|+++++. +|+. .+.|.. +.+ +|.+.|.+.+.
T Consensus 111 ~~~v~~~P~~~lid~~G~i-~~~g~~~~~~~~~g~~~~~-~l~~~i~~ll~ 159 (188)
T 2cvb_A 111 AYRALRTPEVFLFDERRLL-RYHGRVNDNPKDPSKVQSH-DLEAAIEALLR 159 (188)
T ss_dssp HTTCCEESEEEEECTTCBE-EEEECSSSCTTCGGGCCCC-HHHHHHHHHHT
T ss_pred HcCCCCCCeEEEECCCCcE-EEEEecCCccccccccCHH-HHHHHHHHHHc
Confidence 99999999999995 4654 333443 343 67777766543
No 318
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.88 E-value=6.8e-09 Score=78.21 Aligned_cols=66 Identities=18% Similarity=0.508 Sum_probs=53.9
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHH---HHhhcCcCCeEEEEE---cChH------------------------HHHhcC
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEK---VDDECDIYGIHMVKI---QDPQ------------------------LAKRYS 227 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~---la~~~~~~~i~~~~i---~~~~------------------------~~~~~~ 227 (285)
+++++|.||++||++|+...|.+.+ +.+++++.++.+..+ .... +.+.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5889999999999999999999999 999886546888777 2211 477899
Q ss_pred CcccCeEEEE-eCCeEE
Q psy159 228 IKTFPALVYF-RNGNPL 243 (285)
Q Consensus 228 v~~~Ptl~~~-~~g~~~ 243 (285)
|.++|+++++ ++|+.+
T Consensus 111 v~~~P~~~lid~~G~i~ 127 (142)
T 3eur_A 111 LRAIPTLYLLDKNKTVL 127 (142)
T ss_dssp CTTCSEEEEECTTCBEE
T ss_pred CCcCCeEEEECCCCcEE
Confidence 9999999999 466644
No 319
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.87 E-value=5.6e-09 Score=84.89 Aligned_cols=86 Identities=15% Similarity=0.245 Sum_probs=63.7
Q ss_pred CC-cEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC--------------------------------ChhHHh
Q psy159 73 NE-FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------------DPRYAR 119 (285)
Q Consensus 73 ~~-~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--------------------------------~~~l~~ 119 (285)
++ .++|.||++||+.|+...|.+.++.+++++.++.++.++ ...+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 45 499999999999999999999999999966556655432 357899
Q ss_pred hhCCCCCCeEEEEccccceeecCCC-----------chhHHHHHHHhhhcc
Q psy159 120 KWGVTKLPAVVYFRHRFPSIYRGDL-----------SEEEEVLQWLITQKT 159 (285)
Q Consensus 120 ~~~i~~~Ptl~~~~~g~~~~y~g~~-----------~~~~~l~~fi~~~~~ 159 (285)
.|++.++|+++++.....+.|.|.. +. ++|.+.|...+.
T Consensus 138 ~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~-~~l~~~i~~ll~ 187 (218)
T 3u5r_E 138 AYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTG-ADLRAAVDAVLK 187 (218)
T ss_dssp HHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCC-HHHHHHHHHHHT
T ss_pred HcCCCCCCeEEEECCCCcEEEeccccccccccccccCH-HHHHHHHHHHHc
Confidence 9999999999999643344565532 22 256666665543
No 320
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.85 E-value=3.4e-08 Score=77.92 Aligned_cols=74 Identities=16% Similarity=0.308 Sum_probs=59.6
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-C-----hHHHHhcCCc-------------------
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-D-----PQLAKRYSIK------------------- 229 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-~-----~~~~~~~~v~------------------- 229 (285)
.+++++|.||++||++|+...+.++++.+++...++.+..+ + . ..+.+++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 36789999999999999999999999999998546778777 2 2 3466777774
Q ss_pred ----ccCeEEEE-eCCeEE-EEecCCc
Q psy159 230 ----TFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 230 ----~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
++|+++++ ++|+.+ .+.|...
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~ 165 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAE 165 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCC
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCc
Confidence 89999999 688866 7778764
No 321
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.85 E-value=1.4e-08 Score=79.87 Aligned_cols=74 Identities=18% Similarity=0.367 Sum_probs=58.3
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCe------EEEEE---c-ChHHHHhc--------------------
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGI------HMVKI---Q-DPQLAKRY-------------------- 226 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i------~~~~i---~-~~~~~~~~-------------------- 226 (285)
.+++++|.||++||++|+...|.+.++.+++++.++ .|+.+ . .+...++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 368999999999999999999999999999886446 88887 3 35555655
Q ss_pred -----CCcccCeEEEE-eCCeEE-EEecCCc
Q psy159 227 -----SIKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 227 -----~v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
++.++|+++++ ++|+.+ .+.|..+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 168 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVT 168 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCC
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCC
Confidence 68899976666 688866 6777764
No 322
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.83 E-value=1.6e-08 Score=78.33 Aligned_cols=72 Identities=13% Similarity=0.154 Sum_probs=54.6
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEE-----------------------E-cChHHHHhcCCcccC
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVK-----------------------I-QDPQLAKRYSIKTFP 232 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~-----------------------i-~~~~~~~~~~v~~~P 232 (285)
.+++++|.||++||++|+.+.|.++++.++ +..+..+. . .+..+++.|+|.++|
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 127 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAP 127 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccccC
Confidence 468899999999999999999999999876 22222222 1 345688999999999
Q ss_pred eEEEE-eCCeEE-EEecCCc
Q psy159 233 ALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 233 tl~~~-~~g~~~-~y~g~~~ 250 (285)
+.+++ ++|+.+ .+.|..+
T Consensus 128 ~~~lid~~G~i~~~~~g~~~ 147 (168)
T 2b1k_A 128 ETFLIDGNGIIRYRHAGDLN 147 (168)
T ss_dssp EEEEECTTSBEEEEEESCCC
T ss_pred EEEEECCCCeEEEEEeCCCC
Confidence 65555 688866 6778664
No 323
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.83 E-value=7.5e-09 Score=73.38 Aligned_cols=78 Identities=9% Similarity=0.052 Sum_probs=56.7
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHH
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEE 149 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~ 149 (285)
..+.++.|+++||++|+.+.+.++++++. ..+..+.++ +++++++|| .+.|++ +.+|+.. ..+..+.+ .
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~---i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g~~~~-~ 86 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDR---FILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHRVNTS-K 86 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSS---SEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESSCCHH-H
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhC---CeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecCCCHH-H
Confidence 45678999999999999999999877543 223344444 578899999 999986 4577654 34455554 7
Q ss_pred HHHHHhhhc
Q psy159 150 VLQWLITQK 158 (285)
Q Consensus 150 l~~fi~~~~ 158 (285)
|.+++....
T Consensus 87 l~~~l~~~~ 95 (100)
T 1wjk_A 87 LEKQLRKLS 95 (100)
T ss_dssp HHHHHHSSS
T ss_pred HHHHHHHHH
Confidence 888887654
No 324
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.82 E-value=1.7e-09 Score=86.53 Aligned_cols=102 Identities=11% Similarity=0.097 Sum_probs=59.1
Q ss_pred hHHHHHcCCCCCCeEEEeecCccccccCCCcc---------hHHHHHHhhcCCCcccccceeecChhHHHHHH--hcCCc
Q psy159 7 TEAAAKYNIINLPSLVYFRKQVPLLYDGDLFD---------EEKILTWLTSQDVFEIKNEIEEVNRRMLDKLL--EENEF 75 (285)
Q Consensus 7 ~~~~~~~~i~~~Ptl~~~~~~~~~~y~g~~~~---------~~~i~~fi~~~~~p~~~~~v~~l~~~~f~~~~--~~~~~ 75 (285)
...+..+||++.|++++ +|+...-.++... ..++..++.+...|...... ....++..+. .+.++
T Consensus 40 ~~~a~~~gi~gvP~fvi--ngk~~~~~~~~~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~--~~g~~y~~l~~p~~~~~ 115 (197)
T 1un2_A 40 EKAAADVQLRGVPAMFV--NGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKKGGGTGAQY--EDGKQYTTLEKPVAGAP 115 (197)
T ss_dssp HHHHHHTTCCSSSEEEE--TTTEEECGGGSCCSSHHHHHHHHHHHHHHHTC---------C--CBTTTEEECSSCCTTCC
T ss_pred HHHHHHcCCCcCCEEEE--cceEecCccccccccHHHHHHHHHHHHHHHHhCccccccccc--CCCCCceEccCCCCCCC
Confidence 45678999999999876 5543221111111 11356666655444321111 1112222221 13568
Q ss_pred EEEEEeCCCChhHHHHHHHH---HhHHhhcCCCCcEEEEeC
Q psy159 76 VTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA 113 (285)
Q Consensus 76 ~lv~Fya~~c~~C~~~~~~~---~~~a~~~~~~~v~~~~~~ 113 (285)
++|.||+.||+||+++.|.| +++++.+.+ ++.+.+++
T Consensus 116 ~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~ 155 (197)
T 1un2_A 116 QVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYH 155 (197)
T ss_dssp SEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEE
T ss_pred EEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEec
Confidence 99999999999999999999 999888853 36666544
No 325
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=3.7e-08 Score=74.82 Aligned_cols=67 Identities=25% Similarity=0.323 Sum_probs=57.1
Q ss_pred hCCeEEEEEECCCChh--hHHHHHHHHHHHhhc-CcCCeEEEEE---cC-------------------------hHHHHh
Q psy159 177 ETQYLAVYFYKLNCNI--CDQILEGLEKVDDEC-DIYGIHMVKI---QD-------------------------PQLAKR 225 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~--c~~~~~~~~~la~~~-~~~~i~~~~i---~~-------------------------~~~~~~ 225 (285)
.+++++|.||++||++ |+...|.+.++.+++ ++.++.+..+ .. ..+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3689999999999999 999999999999999 6545788777 22 378899
Q ss_pred cCCcccCeEEEE-eCCeEE
Q psy159 226 YSIKTFPALVYF-RNGNPL 243 (285)
Q Consensus 226 ~~v~~~Ptl~~~-~~g~~~ 243 (285)
|+|.++|+++++ ++|+.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~ 130 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKIL 130 (150)
T ss_dssp TTCCSSSEEEEECTTSBEE
T ss_pred cCCCccCeEEEECCCCEEE
Confidence 999999999999 678755
No 326
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.81 E-value=2e-08 Score=87.30 Aligned_cols=73 Identities=15% Similarity=0.268 Sum_probs=61.4
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc------------------------------ChHHHHhcC
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ------------------------------DPQLAKRYS 227 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~------------------------------~~~~~~~~~ 227 (285)
+++++|.||++||++|+.+.|.++++.+++++.++.+..+. ...+++.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 68999999999999999999999999999986457777762 246889999
Q ss_pred CcccCeEEEE-eCCeEE-EEecCCc
Q psy159 228 IKTFPALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 228 v~~~Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
|.++|+++++ ++|+.+ .+.|..+
T Consensus 162 V~~~Pt~~lID~~G~Iv~~~~G~~~ 186 (352)
T 2hyx_A 162 NRYWPAEYLIDATGTVRHIKFGEGD 186 (352)
T ss_dssp CCEESEEEEECTTSBEEEEEESBCC
T ss_pred CCccCEEEEEeCCCeEEEEEcCCCC
Confidence 9999999888 788866 6777654
No 327
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.81 E-value=1.4e-08 Score=73.70 Aligned_cols=68 Identities=22% Similarity=0.393 Sum_probs=49.5
Q ss_pred HHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-C-----hHHHHhcCCcccCeEEEEeCCeE
Q psy159 171 LETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-D-----PQLAKRYSIKTFPALVYFRNGNP 242 (285)
Q Consensus 171 ~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-~-----~~~~~~~~v~~~Ptl~~~~~g~~ 242 (285)
+++.++. +++++ ||++||++|+.+.|.+++++.. +.+..+ . . ..+++.|++.++|++ |.+|+.
T Consensus 13 ~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~ 83 (116)
T 2e7p_A 13 AKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQ 83 (116)
T ss_dssp HHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred HHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 4444443 45555 9999999999999999998644 356666 2 2 358899999999999 568876
Q ss_pred E-EEec
Q psy159 243 L-IFEG 247 (285)
Q Consensus 243 ~-~y~g 247 (285)
+ .+.|
T Consensus 84 v~~~~~ 89 (116)
T 2e7p_A 84 IGGCDT 89 (116)
T ss_dssp EECHHH
T ss_pred ECChHH
Confidence 5 3344
No 328
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.79 E-value=2.7e-08 Score=74.96 Aligned_cols=66 Identities=15% Similarity=0.137 Sum_probs=55.2
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-C--------------------------hHHHHhcCC
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-D--------------------------PQLAKRYSI 228 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-~--------------------------~~~~~~~~v 228 (285)
+++++|.||++||++|+...|.+.++.+++++.++.+..+ + . ..+++.|+|
T Consensus 32 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (143)
T 4fo5_A 32 GRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDL 111 (143)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTG
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCC
Confidence 6889999999999999999999999999998546777776 1 1 257788999
Q ss_pred cccCeEEEEe-CCeEE
Q psy159 229 KTFPALVYFR-NGNPL 243 (285)
Q Consensus 229 ~~~Ptl~~~~-~g~~~ 243 (285)
.++|+.+++. +|+.+
T Consensus 112 ~~~P~~~lid~~G~i~ 127 (143)
T 4fo5_A 112 RKGFKNFLINDEGVII 127 (143)
T ss_dssp GGCCCEEEECTTSBEE
T ss_pred CCCCcEEEECCCCEEE
Confidence 9999988885 77754
No 329
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.77 E-value=4.2e-08 Score=79.67 Aligned_cols=70 Identities=24% Similarity=0.406 Sum_probs=58.2
Q ss_pred CC-eEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c------------------------------ChHHHH
Q psy159 178 TQ-YLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q------------------------------DPQLAK 224 (285)
Q Consensus 178 ~~-~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~------------------------------~~~~~~ 224 (285)
++ +++|.||++||++|+...|.++++.+++++.++.|+.+ + ...+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 45 59999999999999999999999999998645888777 2 347899
Q ss_pred hcCCcccCeEEEE-eCCeEEEEecC
Q psy159 225 RYSIKTFPALVYF-RNGNPLIFEGE 248 (285)
Q Consensus 225 ~~~v~~~Ptl~~~-~~g~~~~y~g~ 248 (285)
.|+|.++|+++++ ++|+. .|.|.
T Consensus 138 ~~~v~~~P~~~liD~~G~i-~~~g~ 161 (218)
T 3u5r_E 138 AYGAACTPDFFLYDRERRL-VYHGQ 161 (218)
T ss_dssp HHTCCEESEEEEECTTCBE-EEEEC
T ss_pred HcCCCCCCeEEEECCCCcE-EEecc
Confidence 9999999999999 56764 46653
No 330
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.77 E-value=8.6e-08 Score=70.52 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=67.6
Q ss_pred cccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEcChHHHHhcCCcccCeEEEEeCC--eE
Q psy159 165 LITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRNG--NP 242 (285)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~~v~~~Ptl~~~~~g--~~ 242 (285)
.-+.+++++++.++++++|-|+++||+.| .+.|.++|+.+ . ++.|+.+.++++++++++. .|++++|+.+ +.
T Consensus 26 i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~~~~v~~~~~v~-~~~vvlfkkfde~~ 99 (124)
T 2l4c_A 26 LTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGISTDSEVLTHYNIT-GNTICLFRLVDNEQ 99 (124)
T ss_dssp CCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEECCHHHHHHTTCC-SSCEEEEETTTTEE
T ss_pred cCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEChHHHHHHcCCC-CCeEEEEEcCCCCc
Confidence 44678899999989999999999999998 67899999999 4 6999999889999999998 7999999975 46
Q ss_pred EEEec
Q psy159 243 LIFEG 247 (285)
Q Consensus 243 ~~y~g 247 (285)
+.|.|
T Consensus 100 ~~~~g 104 (124)
T 2l4c_A 100 LNLED 104 (124)
T ss_dssp EEECH
T ss_pred eeecC
Confidence 68987
No 331
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.25 E-value=7.9e-10 Score=83.29 Aligned_cols=72 Identities=19% Similarity=0.386 Sum_probs=56.2
Q ss_pred CC-eEEEEEECCCChhhHHHHHHHHHHHhhcCc--CCeEEEEE--c-C-------------------------hHHHHhc
Q psy159 178 TQ-YLAVYFYKLNCNICDQILEGLEKVDDECDI--YGIHMVKI--Q-D-------------------------PQLAKRY 226 (285)
Q Consensus 178 ~~-~~~v~F~a~~c~~c~~~~~~~~~la~~~~~--~~i~~~~i--~-~-------------------------~~~~~~~ 226 (285)
++ +++|.||++||++|+.+.|.+++++++++. .++.+..+ + . ..+++.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 899999999999999999999999988832 14555555 1 2 3688899
Q ss_pred CCcccCeEEEEe-CCeEEEEecCC
Q psy159 227 SIKTFPALVYFR-NGNPLIFEGEN 249 (285)
Q Consensus 227 ~v~~~Ptl~~~~-~g~~~~y~g~~ 249 (285)
+|.++|+++++. +|+.+...|..
T Consensus 105 ~v~~~P~~~lid~~G~i~~~~~~~ 128 (143)
T 2lus_A 105 GITGIPALVIVKKDGTLISMNGRG 128 (143)
Confidence 999999999996 78766555543
No 332
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.76 E-value=1.9e-09 Score=86.24 Aligned_cols=100 Identities=16% Similarity=0.226 Sum_probs=59.4
Q ss_pred hhHHhhhCCCCCCeEEEEccccceeecCCCchh---------HHHHHHHhhhccccc-cccccHHHHHHHH--HhCCeEE
Q psy159 115 PRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEE---------EEVLQWLITQKTEDR-IELITRVMLETMV--EETQYLA 182 (285)
Q Consensus 115 ~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~---------~~l~~fi~~~~~~~~-v~~~~~~~~~~~~--~~~~~~~ 182 (285)
...++.+||.+.|++++ +|+...-.++.+.+ .+++.++.+...+.. -....+.++..+. ...++++
T Consensus 40 ~~~a~~~gi~gvP~fvi--ngk~~~~~~~~~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~~~g~~y~~l~~p~~~~~~v 117 (197)
T 1un2_A 40 EKAAADVQLRGVPAMFV--NGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGAPQV 117 (197)
T ss_dssp HHHHHHTTCCSSSEEEE--TTTEEECGGGSCCSSHHHHHHHHHHHHHHHTC---------CCBTTTEEECSSCCTTCCSE
T ss_pred HHHHHHcCCCcCCEEEE--cceEecCccccccccHHHHHHHHHHHHHHHHhCcccccccccCCCCCceEccCCCCCCCEE
Confidence 34678899999999866 55432211112211 023333332221111 0112233333221 1256899
Q ss_pred EEEECCCChhhHHHHHHH---HHHHhhcCcCCeEEEEE
Q psy159 183 VYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI 217 (285)
Q Consensus 183 v~F~a~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i 217 (285)
|.||+.||+||+++.|.+ +++++++.+ ++.|.++
T Consensus 118 veFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~ 154 (197)
T 1un2_A 118 LEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKY 154 (197)
T ss_dssp EEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEE
T ss_pred EEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEe
Confidence 999999999999999999 999999975 6888887
No 333
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.75 E-value=1.4e-08 Score=78.84 Aligned_cols=84 Identities=17% Similarity=0.204 Sum_probs=61.7
Q ss_pred cCCcEEEEEeCCCChh-HHHHHHHHHhHHhhcCCC---CcEEEEeC--C-----------------------------hh
Q psy159 72 ENEFVTVFFYETDHKD-SVKVLERLEKIDGETDNM---DITFVKMA--D-----------------------------PR 116 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~-C~~~~~~~~~~a~~~~~~---~v~~~~~~--~-----------------------------~~ 116 (285)
.+++++|.||++||++ |....|.+.++.++++.. ++.++.++ . ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4678999999999997 999999999999988632 45555443 1 35
Q ss_pred HHhhhCC---------------CCCCeEEEEccccc-eeecCCC--chhHHHHHHHhh
Q psy159 117 YARKWGV---------------TKLPAVVYFRHRFP-SIYRGDL--SEEEEVLQWLIT 156 (285)
Q Consensus 117 l~~~~~i---------------~~~Ptl~~~~~g~~-~~y~g~~--~~~~~l~~fi~~ 156 (285)
++++|++ .+.|+++++.+|+. ..+.|.. +.+ ++.+.|++
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~-~l~~~l~~ 170 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATD-RVVADLQA 170 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHH-HHHHHHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHH-HHHHHHHH
Confidence 6666664 57899999996665 3466655 443 78777764
No 334
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=1.1e-09 Score=84.22 Aligned_cols=83 Identities=18% Similarity=0.130 Sum_probs=55.1
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHh-HHhhcC-CCCcEEEEeC---ChhHH----------------------hhhC--
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEK-IDGETD-NMDITFVKMA---DPRYA----------------------RKWG-- 122 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~-~a~~~~-~~~v~~~~~~---~~~l~----------------------~~~~-- 122 (285)
.+++++|.||++||++|+...|.+.+ +.+.+. ..++.++.++ ..+.+ +.|+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46789999999999999999999998 877775 4456665543 22222 3333
Q ss_pred CCCCCeEEEE-ccccce-eecCCCchhHHHHHHHhh
Q psy159 123 VTKLPAVVYF-RHRFPS-IYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 123 i~~~Ptl~~~-~~g~~~-~y~g~~~~~~~l~~fi~~ 156 (285)
+.++|+++++ ++|+.. .+.| .+.. ++.+++..
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~-~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEE-EFASLVQQ 145 (159)
Confidence 5679999988 457653 3444 3332 45555443
No 335
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.73 E-value=2.6e-08 Score=68.02 Aligned_cols=71 Identities=21% Similarity=0.397 Sum_probs=53.4
Q ss_pred EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---C----hhHHhhhC--CCCCCeEEEEccccceeecCCCchh
Q psy159 77 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---D----PRYARKWG--VTKLPAVVYFRHRFPSIYRGDLSEE 147 (285)
Q Consensus 77 lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~----~~l~~~~~--i~~~Ptl~~~~~g~~~~y~g~~~~~ 147 (285)
++.|+++||++|+++.+.+++++....+ +.+..+| + .++++++| +.++|++ |.+|+.+ |..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~--i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i---~~~--- 72 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHI---GGY--- 72 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEE---ESS---
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC--ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEE---ECH---
Confidence 6789999999999999999999887653 6666655 2 37899999 9999998 3466543 222
Q ss_pred HHHHHHHhhh
Q psy159 148 EEVLQWLITQ 157 (285)
Q Consensus 148 ~~l~~fi~~~ 157 (285)
++|.+++.+.
T Consensus 73 ~~l~~~~~~~ 82 (85)
T 1ego_A 73 TDFAAWVKEN 82 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 2688887654
No 336
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.72 E-value=7.5e-08 Score=75.40 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=55.1
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--------------------------cChHHHHhcCCccc
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--------------------------QDPQLAKRYSIKTF 231 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--------------------------~~~~~~~~~~v~~~ 231 (285)
+++++|.||++||++|+...|.++++.++ + +.++.+ ....+++.|+|.++
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~--v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ--G--VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT--T--CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC--C--CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 67899999999999999999999999877 2 344333 24568889999999
Q ss_pred CeEEEE-eCCeEE-EEecCCc
Q psy159 232 PALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 232 Ptl~~~-~~g~~~-~y~g~~~ 250 (285)
|+++++ ++|+.+ .+.|..+
T Consensus 134 P~~~lid~~G~i~~~~~g~~~ 154 (176)
T 3kh7_A 134 PETYLIDKQGIIRHKIVGVVD 154 (176)
T ss_dssp CEEEEECTTCBEEEEEESCCC
T ss_pred CeEEEECCCCeEEEEEcCCCC
Confidence 987777 678766 6778765
No 337
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.71 E-value=8e-08 Score=76.34 Aligned_cols=65 Identities=18% Similarity=0.342 Sum_probs=54.5
Q ss_pred CeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc--------------------------------ChHHHHhc
Q psy159 179 QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ--------------------------------DPQLAKRY 226 (285)
Q Consensus 179 ~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~--------------------------------~~~~~~~~ 226 (285)
.+++|.||++||++|+...|.++++.+++.+.++.+..+. ...+++.|
T Consensus 47 ~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 3599999999999999999999999999886457777762 23588899
Q ss_pred CCcccCeEEEE-eCCeEE
Q psy159 227 SIKTFPALVYF-RNGNPL 243 (285)
Q Consensus 227 ~v~~~Ptl~~~-~~g~~~ 243 (285)
+|.++|+++++ ++|+.+
T Consensus 127 ~v~~~P~~~lid~~G~i~ 144 (196)
T 2ywi_A 127 DAACTPDFYIFDRDLKCV 144 (196)
T ss_dssp TCCEESEEEEEETTCBEE
T ss_pred CCCCCCeEEEEcCCCeEE
Confidence 99999999999 578755
No 338
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.70 E-value=2.2e-07 Score=73.29 Aligned_cols=69 Identities=20% Similarity=0.296 Sum_probs=56.8
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc--------------------------------ChHHHHh
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ--------------------------------DPQLAKR 225 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~--------------------------------~~~~~~~ 225 (285)
+++++|.||++||++|+...+.++++.+++.+. +.+..+. ...+++.
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 578999999999999999999999999999863 7777662 2358889
Q ss_pred cCCcccCeEEEE-eCCeEEEEecC
Q psy159 226 YSIKTFPALVYF-RNGNPLIFEGE 248 (285)
Q Consensus 226 ~~v~~~Ptl~~~-~~g~~~~y~g~ 248 (285)
|++.++|+++++ ++|+.+ +.|.
T Consensus 112 ~~v~~~P~~~lid~~G~i~-~~g~ 134 (188)
T 2cvb_A 112 YRALRTPEVFLFDERRLLR-YHGR 134 (188)
T ss_dssp TTCCEESEEEEECTTCBEE-EEEC
T ss_pred cCCCCCCeEEEECCCCcEE-EEEe
Confidence 999999999999 677754 3354
No 339
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.70 E-value=8.7e-08 Score=73.79 Aligned_cols=72 Identities=13% Similarity=0.262 Sum_probs=56.5
Q ss_pred cCCc-EEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C----------------------ChhHHhhhCCCC
Q psy159 72 ENEF-VTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A----------------------DPRYARKWGVTK 125 (285)
Q Consensus 72 ~~~~-~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~----------------------~~~l~~~~~i~~ 125 (285)
.++. ++|.|| ++||++|....|.+.++.++++..++.++.+ | ...+++.|++.+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 3455 999999 9999999999999999999995545555543 3 357889999999
Q ss_pred ----CCeEEEEc-cccc-eeecCC
Q psy159 126 ----LPAVVYFR-HRFP-SIYRGD 143 (285)
Q Consensus 126 ----~Ptl~~~~-~g~~-~~y~g~ 143 (285)
.|+.+++. +|+. ..+.|.
T Consensus 107 ~~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp SSSCCCEEEEECTTSBEEEEEECS
T ss_pred cCcccceEEEECCCCEEEEEEecC
Confidence 99999886 5765 356663
No 340
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.70 E-value=3.7e-08 Score=75.84 Aligned_cols=86 Identities=17% Similarity=0.211 Sum_probs=62.9
Q ss_pred cCCcEEEEEeCCCChh-HHHHHHHHHhHHhhcCC----CCcEEEE--eCC-----------------------------h
Q psy159 72 ENEFVTVFFYETDHKD-SVKVLERLEKIDGETDN----MDITFVK--MAD-----------------------------P 115 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~-C~~~~~~~~~~a~~~~~----~~v~~~~--~~~-----------------------------~ 115 (285)
.+++++|.||++||++ |....|.+.++.++++. .++.++. +|. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4688999999999997 99999999999988842 2455554 432 1
Q ss_pred hHHhhhCCCCCC---------------eEEEEc-cccc-eeecCCCchhHHHHHHHhhhc
Q psy159 116 RYARKWGVTKLP---------------AVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 116 ~l~~~~~i~~~P---------------tl~~~~-~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
.+++.|++...| +++++. +|+. ..+.|..+.+ ++.+.+.+.+
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKG-EIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHH-HHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHH-HHHHHHHHHH
Confidence 378889999999 566654 5766 4567776664 7877776543
No 341
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.70 E-value=5.4e-08 Score=75.47 Aligned_cols=86 Identities=15% Similarity=0.167 Sum_probs=63.5
Q ss_pred cCCcEEEEEeCCCChh-HHHHHHHHHhHHhhcCC----CCcEEEE--eCC-----------------------------h
Q psy159 72 ENEFVTVFFYETDHKD-SVKVLERLEKIDGETDN----MDITFVK--MAD-----------------------------P 115 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~-C~~~~~~~~~~a~~~~~----~~v~~~~--~~~-----------------------------~ 115 (285)
.+++++|.||++||++ |....|.+.++.++++. .++.++. +|. .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4678999999999998 99999999999988831 3455554 431 1
Q ss_pred hHHhhhCCCCCC---------------eEEEE-ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 116 RYARKWGVTKLP---------------AVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 116 ~l~~~~~i~~~P---------------tl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
.+++.|++...| +++++ ++|+. ..+.|..+.+ ++.+.+...+
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~ll 163 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAE-QISDSVRRHM 163 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHH-HHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHH-HHHHHHHHHH
Confidence 578889999888 66666 45766 4577777664 7887776544
No 342
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.68 E-value=6.6e-08 Score=75.52 Aligned_cols=80 Identities=11% Similarity=0.217 Sum_probs=59.5
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---------------------------------------
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------------------- 113 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~--------------------------------------- 113 (285)
++..++.|+++||++|+++.|.+.++.+.+++..+.+..+.
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~~~ 101 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKANET 101 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCSHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCCHH
Confidence 46788999999999999999999999887754334443321
Q ss_pred -------------------------------ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhhh
Q psy159 114 -------------------------------DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 114 -------------------------------~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~ 157 (285)
+..+++++||.++||+++ +|+ .+.|..+.+ .+.+.|.+.
T Consensus 102 ~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~--~~~G~~~~~-~l~~~i~~~ 171 (175)
T 3gyk_A 102 GVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA--LVPGFVEQS-QLQDAVDRA 171 (175)
T ss_dssp HHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE--EECSCCCHH-HHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE--EeeCCCCHH-HHHHHHHHH
Confidence 234667899999999987 564 567877765 787777654
No 343
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.67 E-value=9.9e-08 Score=65.04 Aligned_cols=58 Identities=21% Similarity=0.399 Sum_probs=47.2
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---c----ChHHHHhcC--CcccCeEEEEeCCeEE
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q----DPQLAKRYS--IKTFPALVYFRNGNPL 243 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~----~~~~~~~~~--v~~~Ptl~~~~~g~~~ 243 (285)
++.|+++||++|+.+.+.+++++.++.+ +.+..+ . ..++.+.++ +.++|++ +.+|+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~--i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i 69 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHI 69 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC--ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEE
Confidence 6789999999999999999999988763 777776 2 147888899 9999998 4588754
No 344
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.67 E-value=7.4e-08 Score=73.93 Aligned_cols=83 Identities=14% Similarity=0.056 Sum_probs=59.3
Q ss_pred CC-cEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C------------------------ChhHHhhhCCC
Q psy159 73 NE-FVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A------------------------DPRYARKWGVT 124 (285)
Q Consensus 73 ~~-~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~------------------------~~~l~~~~~i~ 124 (285)
++ +++|.|| ++||++|....|.+.++.++++..++.++.+ | +..+++.|++.
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~ 114 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVF 114 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCE
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCc
Confidence 44 8999998 9999999999999999999996555655543 2 45688899998
Q ss_pred ----CCC--eEEEE-ccccc-eeecCCCchh---HHHHHHHh
Q psy159 125 ----KLP--AVVYF-RHRFP-SIYRGDLSEE---EEVLQWLI 155 (285)
Q Consensus 125 ----~~P--tl~~~-~~g~~-~~y~g~~~~~---~~l~~fi~ 155 (285)
++| +.+++ ++|+. ..+.|..... +++++.+.
T Consensus 115 ~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 115 NEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALA 156 (160)
T ss_dssp ETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHH
T ss_pred cccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 999 66665 46765 3455654321 24555544
No 345
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.67 E-value=4e-08 Score=79.68 Aligned_cols=79 Identities=16% Similarity=0.271 Sum_probs=56.6
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEE-----------------------------------------
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK----------------------------------------- 111 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~----------------------------------------- 111 (285)
++.+++.|+++||++|+++.|.++++++. +..+.+..
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~~ 163 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNAL--GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPASC 163 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhHH
Confidence 46789999999999999999999988653 11111111
Q ss_pred ---eC-ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhhh
Q psy159 112 ---MA-DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 112 ---~~-~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~ 157 (285)
++ +..+++++||.++||+ ++.+|. .+.|....+ +|.+++...
T Consensus 164 ~~~v~~~~~l~~~~gV~gtPt~-v~~dG~--~~~G~~~~~-~l~~~l~~~ 209 (216)
T 1eej_A 164 DVDIADHYALGVQLGVSGTPAV-VLSNGT--LVPGYQPPK-EMKEFLDEH 209 (216)
T ss_dssp SCCHHHHHHHHHHHTCCSSSEE-ECTTSC--EEESCCCHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccCEE-EEcCCe--EecCCCCHH-HHHHHHHHh
Confidence 11 3567889999999998 566774 456777664 788887654
No 346
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.66 E-value=1e-07 Score=75.56 Aligned_cols=86 Identities=12% Similarity=0.148 Sum_probs=61.0
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C--------C----hhHH-hh----------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A--------D----PRYA-RK---------------- 120 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~--------~----~~l~-~~---------------- 120 (285)
.+++++|.||++||+.|....|.+.++.+++++.++.++.+ | . ...+ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 46899999999999999999999999999996545666654 3 1 1223 22
Q ss_pred -------------hCCCCCC------eEEEE-ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 121 -------------WGVTKLP------AVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 121 -------------~~i~~~P------tl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+++.++| +.+++ ++|+. ..+.|....+ ++.+.|.+.+
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~ll 184 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVK-DIEKKLIPLL 184 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHH-HHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHH-HHHHHHHHHH
Confidence 3677788 66665 56776 4567776664 7777776544
No 347
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.66 E-value=1.6e-07 Score=71.62 Aligned_cols=73 Identities=12% Similarity=0.242 Sum_probs=52.2
Q ss_pred HHHhCCeEEEEEECCCChhhHHHHHHH---HHHHhhcCcCCeEEEEE-----cChHHHHhcCCcccCeEEEEe-C-CeEE
Q psy159 174 MVEETQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI-----QDPQLAKRYSIKTFPALVYFR-N-GNPL 243 (285)
Q Consensus 174 ~~~~~~~~~v~F~a~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i-----~~~~~~~~~~v~~~Ptl~~~~-~-g~~~ 243 (285)
..+++++++|+||++||..|+.|.... .++++.++. +..+..+ +...+.++|++.++|+++++. + |+.+
T Consensus 38 Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l 116 (153)
T 2dlx_A 38 GQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKL 116 (153)
T ss_dssp HHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCC
T ss_pred HHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEe
Confidence 344589999999999999999997543 344444432 4556666 234588999999999999995 3 6544
Q ss_pred -EEec
Q psy159 244 -IFEG 247 (285)
Q Consensus 244 -~y~g 247 (285)
...|
T Consensus 117 ~~~~g 121 (153)
T 2dlx_A 117 VEWHQ 121 (153)
T ss_dssp EEESS
T ss_pred eecCC
Confidence 4544
No 348
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.66 E-value=5.6e-08 Score=75.65 Aligned_cols=85 Identities=9% Similarity=0.086 Sum_probs=59.2
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC----------C----hhHH-------------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----------D----PRYA------------------- 118 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~----------~----~~l~------------------- 118 (285)
.+++++|.||++||+.|+ ..|.+.++.++++..++.++.++ . ...+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 468999999999999999 99999999999865556655441 0 1122
Q ss_pred -----------hhhCCCCCC------eEEEE-ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 119 -----------RKWGVTKLP------AVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 119 -----------~~~~i~~~P------tl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+.|++.++| +.+++ ++|+. ..+.|..+.+ ++.+.|.+.+
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~ll 167 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPS-SLSETIEELL 167 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGG-GGHHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHH-HHHHHHHHHH
Confidence 236788899 66666 46765 4567766654 6777766543
No 349
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.65 E-value=1e-07 Score=73.76 Aligned_cols=86 Identities=5% Similarity=0.088 Sum_probs=60.7
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC----------C----hhHHh-hh---------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----------D----PRYAR-KW--------------- 121 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~----------~----~~l~~-~~--------------- 121 (285)
.+++++|.||++||++|....|.+.++.+++++.++.++.++ . ...++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 468999999999999999999999999999965556666552 1 22333 32
Q ss_pred --------------CC--CCCC---eEEEE-ccccc-eeecCCCchhHHHHHHHhhhc
Q psy159 122 --------------GV--TKLP---AVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 122 --------------~i--~~~P---tl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~ 158 (285)
++ .++| +.+++ ++|+. ..+.|..+.+ ++.+.|.+.+
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~ll 167 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPL-SLERDIKQLL 167 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGG-GGHHHHHHHT
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHH-HHHHHHHHHh
Confidence 44 5678 66666 45766 4567776654 6777776544
No 350
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.64 E-value=1.9e-07 Score=71.92 Aligned_cols=72 Identities=15% Similarity=0.242 Sum_probs=58.9
Q ss_pred CCe-EEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c----------------------ChHHHHhcCCcc-
Q psy159 178 TQY-LAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q----------------------DPQLAKRYSIKT- 230 (285)
Q Consensus 178 ~~~-~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~----------------------~~~~~~~~~v~~- 230 (285)
++. ++|.|| ++||++|+...|.+.++.+++++.++.+..+ + ...+++.|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 454 899999 9999999999999999999998645777776 2 356889999999
Q ss_pred ---cCeEEEE-eCCeEE-EEecCC
Q psy159 231 ---FPALVYF-RNGNPL-IFEGEN 249 (285)
Q Consensus 231 ---~Ptl~~~-~~g~~~-~y~g~~ 249 (285)
+|+++++ ++|+.+ .+.|..
T Consensus 108 ~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 108 ILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp SSCCCEEEEECTTSBEEEEEECSS
T ss_pred CcccceEEEECCCCEEEEEEecCC
Confidence 9998888 588765 677743
No 351
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.04 E-value=4.4e-09 Score=80.82 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=51.3
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHH-HHhhcC-cCCeEEEEE---cChHHHH----------------------hcC--
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEK-VDDECD-IYGIHMVKI---QDPQLAK----------------------RYS-- 227 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~-la~~~~-~~~i~~~~i---~~~~~~~----------------------~~~-- 227 (285)
.+++++|.||++||++|+...|.+.+ +..++. ..++.++.+ ..++..+ .|+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 36789999999999999999999998 887776 335666666 2222223 333
Q ss_pred CcccCeEEEE-eCCeEE-EEec
Q psy159 228 IKTFPALVYF-RNGNPL-IFEG 247 (285)
Q Consensus 228 v~~~Ptl~~~-~~g~~~-~y~g 247 (285)
+.++|+++++ ++|+.+ .+.|
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g 133 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL 133 (159)
Confidence 5679999998 788765 4445
No 352
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.61 E-value=6.4e-08 Score=78.20 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=56.7
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEE--e--------------------------------------
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK--M-------------------------------------- 112 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~-------------------------------------- 112 (285)
++.+++.|+++||++|+++.|.++++.+. ++.+.. .
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 46789999999999999999999887652 122221 0
Q ss_pred --C-----ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhh
Q psy159 113 --A-----DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLIT 156 (285)
Q Consensus 113 --~-----~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~ 156 (285)
+ +..+++++||++.||+++ .+|+ .+.|....+ .|.+++.+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~--~~~G~~~~~-~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE--LIGGYLKPA-DLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC--CCCSCCCHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE--EecCCCCHH-HHHHHHHh
Confidence 1 345778999999999887 6776 456777665 78888765
No 353
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.57 E-value=1.4e-07 Score=75.08 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=63.7
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC--------------------------ChhHHhhhC
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MA--------------------------DPRYARKWG 122 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~--------------------------~~~l~~~~~ 122 (285)
.+++++|.|| ++||++|....|.+.++.++++..++.++. +| +..+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3578999999 999999999999999999988543455543 33 235788899
Q ss_pred CC-----CCCeEEEEc-cccc-eeecCCC----chhHHHHHHHhhhc
Q psy159 123 VT-----KLPAVVYFR-HRFP-SIYRGDL----SEEEEVLQWLITQK 158 (285)
Q Consensus 123 i~-----~~Ptl~~~~-~g~~-~~y~g~~----~~~~~l~~fi~~~~ 158 (285)
+. +.|+++++. +|+. ..+.|.. .. +++++.+....
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~-~~l~~~l~~l~ 169 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNV-DEVLRVLDALQ 169 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCH-HHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCH-HHHHHHHHHHh
Confidence 99 999999996 5765 3354543 33 37777776654
No 354
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.57 E-value=2.9e-07 Score=71.05 Aligned_cols=41 Identities=5% Similarity=0.071 Sum_probs=34.9
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~ 112 (285)
.+++++|.||++||++|....|.+.++.++++..++.++.+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 70 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAF 70 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 46899999999999999999999999999986555666654
No 355
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.57 E-value=2.6e-07 Score=70.79 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=58.1
Q ss_pred CeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c------------------------ChHHHHhcCCc--
Q psy159 179 QYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q------------------------DPQLAKRYSIK-- 229 (285)
Q Consensus 179 ~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~------------------------~~~~~~~~~v~-- 229 (285)
++++|.|| ++||++|+...+.+.++.+++++.++.+..+ + ...+++.|++.
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~ 116 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNE 116 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEET
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccc
Confidence 38999998 9999999999999999999997545777776 2 56688999998
Q ss_pred --ccC--eEEEE-eCCeEE-EEecCCc
Q psy159 230 --TFP--ALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 230 --~~P--tl~~~-~~g~~~-~y~g~~~ 250 (285)
++| +++++ ++|+.+ .+.|...
T Consensus 117 ~~~~p~~~~~lid~~G~i~~~~~g~~~ 143 (160)
T 1xvw_A 117 QAGIANRGTFVVDRSGIIRFAEMKQPG 143 (160)
T ss_dssp TTTEECSEEEEECTTSBEEEEEECCTT
T ss_pred cCCCeeeeEEEECCCCeEEEEEecCCC
Confidence 999 66555 688866 6667653
No 356
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.56 E-value=1.2e-07 Score=74.83 Aligned_cols=86 Identities=12% Similarity=0.119 Sum_probs=63.1
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC--------------------------ChhHHhhhC
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MA--------------------------DPRYARKWG 122 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~--------------------------~~~l~~~~~ 122 (285)
.+++++|.|| ++||++|....|.+.++.++++..++.++. +| +..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 4578999999 999999999999999999988533444443 33 235788899
Q ss_pred CC------CCCeEEEEc-cccc-eeecCCC----chhHHHHHHHhhhc
Q psy159 123 VT------KLPAVVYFR-HRFP-SIYRGDL----SEEEEVLQWLITQK 158 (285)
Q Consensus 123 i~------~~Ptl~~~~-~g~~-~~y~g~~----~~~~~l~~fi~~~~ 158 (285)
+. +.|+++++. +|+. ..+.|.. +.+ ++++.++...
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~-~l~~~l~~l~ 156 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDAS-TLINKVKAAQ 156 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTT-HHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHH-HHHHHHHHHh
Confidence 98 899999995 5765 3455543 343 6777776543
No 357
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.55 E-value=1.5e-07 Score=74.04 Aligned_cols=41 Identities=5% Similarity=0.063 Sum_probs=35.2
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~ 112 (285)
.+++++|.||++||+.|....|.+.+++++++..++.++.+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~v 88 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAF 88 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 46899999999999999999999999999996555666655
No 358
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.54 E-value=1.4e-07 Score=66.73 Aligned_cols=64 Identities=22% Similarity=0.379 Sum_probs=48.5
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c---ChHHHHhcCCcccCeEEEEeCCeEEEEecCCc
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q---DPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 250 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~---~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~ 250 (285)
+.+.++.|+++||++|+.+.+.+++++.. +.|..+ + ++.+.++|+ .++|++ +.+|+.+ ..|..+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~-----i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g~~ 83 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDR-----FILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHRVN 83 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSS-----SEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESSCC
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhC-----CeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecCCC
Confidence 45678899999999999999999877533 556655 3 577899999 999976 4688865 344443
No 359
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.54 E-value=7.3e-08 Score=76.93 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=63.3
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-----------------------------~~~l~~ 119 (285)
.+++++|.|| ++||++|....|.+.++.++++..++.++.+ | +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 4578999999 9999999999999999998884444554433 3 246888
Q ss_pred hhCCC-----CCCeEEEEc-cccc-eeecCCC----chhHHHHHHHhhhc
Q psy159 120 KWGVT-----KLPAVVYFR-HRFP-SIYRGDL----SEEEEVLQWLITQK 158 (285)
Q Consensus 120 ~~~i~-----~~Ptl~~~~-~g~~-~~y~g~~----~~~~~l~~fi~~~~ 158 (285)
.|++. +.|+++++. +|+. ..+.|.. .. +++.+.+....
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~-~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNA-DEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHH-HHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCH-HHHHHHHHHHH
Confidence 99999 999999985 5765 3355543 33 37777776543
No 360
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.53 E-value=2.5e-07 Score=73.16 Aligned_cols=87 Identities=9% Similarity=0.102 Sum_probs=60.3
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C---------ChhHH---h-h----------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A---------DPRYA---R-K---------------- 120 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~---------~~~l~---~-~---------------- 120 (285)
.+++++|.||++||++|....|.+.++.+++++.++.++.+ | ...+. + +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 56899999999999999999999999999996555666544 2 11111 1 1
Q ss_pred ----------------hCCCCCC---eEEEE-ccccc-eeecCCCchhHHHHHHHhhhcc
Q psy159 121 ----------------WGVTKLP---AVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 121 ----------------~~i~~~P---tl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~~~ 159 (285)
+++..+| +.+++ ++|+. ..+.|..+.+ ++.+.|.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~-~l~~~i~~lL~ 183 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVK-DIEEKLIPLLG 183 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHH-HHHHHHHHHC-
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHH-HHHHHHHHHHh
Confidence 2344566 77777 45766 4577776665 78888776654
No 361
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.52 E-value=4.1e-07 Score=71.53 Aligned_cols=41 Identities=5% Similarity=0.020 Sum_probs=35.0
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~ 112 (285)
.+++++|.||++||+.|....|.+.++.++++..++.++.+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 86 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAF 86 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 46889999999999999999999999999996555666654
No 362
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.50 E-value=4.6e-07 Score=71.05 Aligned_cols=41 Identities=10% Similarity=0.094 Sum_probs=35.9
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~ 112 (285)
.+++++|.||++||+.|....|.+.++.+++++.++.++.+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 77 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAF 77 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEE
Confidence 56799999999999999999999999999997666666655
No 363
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.49 E-value=4.7e-07 Score=70.11 Aligned_cols=73 Identities=10% Similarity=0.302 Sum_probs=56.5
Q ss_pred hCCeEEEEEECCCChh-hHHHHHHHHHHHhhcCcC---CeEEEEE--cC-----------------------------hH
Q psy159 177 ETQYLAVYFYKLNCNI-CDQILEGLEKVDDECDIY---GIHMVKI--QD-----------------------------PQ 221 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~-c~~~~~~~~~la~~~~~~---~i~~~~i--~~-----------------------------~~ 221 (285)
.+++++|.||++||++ |+...|.++++.+++... ++.+..+ +. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3678999999999997 999999999999998842 5777777 21 24
Q ss_pred HHHhcC---------------CcccCeEEEEeCCeEE-EEecCC
Q psy159 222 LAKRYS---------------IKTFPALVYFRNGNPL-IFEGEN 249 (285)
Q Consensus 222 ~~~~~~---------------v~~~Ptl~~~~~g~~~-~y~g~~ 249 (285)
+++.|+ +.+.|+++++.+|+.+ .+.|..
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~ 157 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDK 157 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCC
Confidence 555655 4578999999988765 566654
No 364
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.46 E-value=5.4e-07 Score=71.10 Aligned_cols=72 Identities=15% Similarity=0.258 Sum_probs=58.8
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c--------------------------ChHHHHhcCC
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q--------------------------DPQLAKRYSI 228 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~--------------------------~~~~~~~~~v 228 (285)
+++++|.|| ++||++|+...|.+.++.+++...++.+..+ + ...+++.|++
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 110 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDV 110 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCC
Confidence 578999999 9999999999999999999987545777766 2 3457888999
Q ss_pred c------ccCeEEEE-eCCeEE-EEecCC
Q psy159 229 K------TFPALVYF-RNGNPL-IFEGEN 249 (285)
Q Consensus 229 ~------~~Ptl~~~-~~g~~~-~y~g~~ 249 (285)
. +.|+++++ ++|+.+ .+.|..
T Consensus 111 ~~~~~g~~~P~~~lid~~G~i~~~~~g~~ 139 (187)
T 1we0_A 111 LNEETGLADRGTFIIDPDGVIQAIEINAD 139 (187)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECT
T ss_pred CcCCCCceeeEEEEECCCCeEEEEEecCC
Confidence 8 89999999 688866 556643
No 365
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.46 E-value=4.2e-07 Score=64.64 Aligned_cols=68 Identities=15% Similarity=0.159 Sum_probs=49.2
Q ss_pred hHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-C-------hhHHhhhCCCCCCeEEEEccc
Q psy159 64 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-D-------PRYARKWGVTKLPAVVYFRHR 135 (285)
Q Consensus 64 ~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~-------~~l~~~~~i~~~Ptl~~~~~g 135 (285)
+.+++++.+. .++.|+++||++|+++.+.+++++.... ++.++.++ + ..+++.+|+.++|+++ .+|
T Consensus 3 ~~~~~~i~~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~--~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~--~~g 76 (105)
T 1kte_A 3 AFVNSKIQPG--KVVVFIKPTCPFCRKTQELLSQLPFKEG--LLEFVDITATSDTNEIQDYLQQLTGARTVPRVF--IGK 76 (105)
T ss_dssp HHHHHHCCTT--CEEEEECSSCHHHHHHHHHHHHSCBCTT--SEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE--ETT
T ss_pred hHHHhhcccC--CEEEEEcCCCHhHHHHHHHHHHcCCCCC--ccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE--ECC
Confidence 3456666544 3678999999999999999998765442 26667766 2 2477889999999973 466
Q ss_pred cc
Q psy159 136 FP 137 (285)
Q Consensus 136 ~~ 137 (285)
+.
T Consensus 77 ~~ 78 (105)
T 1kte_A 77 EC 78 (105)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 366
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.46 E-value=7.1e-07 Score=69.04 Aligned_cols=73 Identities=21% Similarity=0.281 Sum_probs=57.1
Q ss_pred CCeEEEEEECCCChh-hHHHHHHHHHHHhhcCc----CCeEEEEE--cC-----------------------------hH
Q psy159 178 TQYLAVYFYKLNCNI-CDQILEGLEKVDDECDI----YGIHMVKI--QD-----------------------------PQ 221 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~-c~~~~~~~~~la~~~~~----~~i~~~~i--~~-----------------------------~~ 221 (285)
+++++|.||++||++ |+...|.++++.++++. .++.+..+ +. ..
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 678999999999998 99999999999999852 25777777 21 14
Q ss_pred HHHhcCCcccC---------------eEEEE-eCCeEE-EEecCCc
Q psy159 222 LAKRYSIKTFP---------------ALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 222 ~~~~~~v~~~P---------------tl~~~-~~g~~~-~y~g~~~ 250 (285)
+++.|+|...| +++++ ++|+.+ .|.|..+
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~ 151 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRS 151 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCC
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCC
Confidence 78889998888 66666 688876 6677664
No 367
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.45 E-value=7.5e-07 Score=68.34 Aligned_cols=73 Identities=27% Similarity=0.429 Sum_probs=56.8
Q ss_pred CCeEEEEEECCCChh-hHHHHHHHHHHHhhcCc----CCeEEEEE--cC-----------------------------hH
Q psy159 178 TQYLAVYFYKLNCNI-CDQILEGLEKVDDECDI----YGIHMVKI--QD-----------------------------PQ 221 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~-c~~~~~~~~~la~~~~~----~~i~~~~i--~~-----------------------------~~ 221 (285)
+++++|.||++||++ |+...|.++++.++++. .++.+..+ +. ..
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 688999999999998 99999999999988863 25777776 21 13
Q ss_pred HHHhcCCcccC---------------eEEEE-eCCeEE-EEecCCc
Q psy159 222 LAKRYSIKTFP---------------ALVYF-RNGNPL-IFEGENK 250 (285)
Q Consensus 222 ~~~~~~v~~~P---------------tl~~~-~~g~~~-~y~g~~~ 250 (285)
+++.|+|...| +++++ ++|+.+ .+.|..+
T Consensus 103 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~ 148 (164)
T 2ggt_A 103 VARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKR 148 (164)
T ss_dssp HHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCC
T ss_pred HHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCC
Confidence 78889999999 55555 688876 5667654
No 368
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.45 E-value=4.7e-07 Score=72.13 Aligned_cols=85 Identities=14% Similarity=0.206 Sum_probs=61.4
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-----------------------------~~~l~~ 119 (285)
.+++++|.|| ++||++|....|.+.+++++++..++.++.+ | ...+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 4578999999 9999999999999999999885445555543 3 135788
Q ss_pred hhCCC------CCCeEEEEc-cccc-eeecCC----CchhHHHHHHHhhh
Q psy159 120 KWGVT------KLPAVVYFR-HRFP-SIYRGD----LSEEEEVLQWLITQ 157 (285)
Q Consensus 120 ~~~i~------~~Ptl~~~~-~g~~-~~y~g~----~~~~~~l~~fi~~~ 157 (285)
.|++. .+|+++++. +|+. ..+.|. +..+ ++++.+...
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~-e~l~~l~~l 161 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVD-EALRLVQAF 161 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHH-HHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHH-HHHHHHHhc
Confidence 89998 799888885 4654 233443 2333 677777654
No 369
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.43 E-value=8.9e-07 Score=70.37 Aligned_cols=72 Identities=13% Similarity=0.235 Sum_probs=58.4
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c--------------------------ChHHHHhcCC
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q--------------------------DPQLAKRYSI 228 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~--------------------------~~~~~~~~~v 228 (285)
+++++|.|| ++||++|+...|.+.++.+++...++.+..+ + ...+++.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 578999999 9999999999999999999987545777766 2 3457888999
Q ss_pred c-----ccCeEEEE-eCCeEE-EEecCC
Q psy159 229 K-----TFPALVYF-RNGNPL-IFEGEN 249 (285)
Q Consensus 229 ~-----~~Ptl~~~-~~g~~~-~y~g~~ 249 (285)
. ++|+++++ ++|+.+ .+.|..
T Consensus 125 ~~~~g~~~P~~~lid~~G~i~~~~~g~~ 152 (195)
T 2bmx_A 125 LNADGVADRVTFIVDPNNEIQFVSATAG 152 (195)
T ss_dssp BCTTSSBCEEEEEECTTSBEEEEEEECT
T ss_pred cccCCCccceEEEEcCCCeEEEEEecCC
Confidence 9 99999999 578766 555654
No 370
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.43 E-value=1.2e-06 Score=67.98 Aligned_cols=40 Identities=10% Similarity=0.175 Sum_probs=34.3
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+ ..|.++++.+++++.++.+..+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~v 70 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGF 70 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEE
Confidence 468999999999999999 9999999999988644666665
No 371
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.42 E-value=6.1e-07 Score=63.76 Aligned_cols=68 Identities=19% Similarity=0.326 Sum_probs=49.2
Q ss_pred HHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cC-------hHHHHhcCCcccCeEEEEeCCe
Q psy159 170 MLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD-------PQLAKRYSIKTFPALVYFRNGN 241 (285)
Q Consensus 170 ~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~-------~~~~~~~~v~~~Ptl~~~~~g~ 241 (285)
.+++.+.++. ++.|+++||++|+.+.+.+++++..+. ++.+..+ .+ ..+.+.+++.++|++ +.+|+
T Consensus 4 ~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~--~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~ 77 (105)
T 1kte_A 4 FVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG--LLEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKE 77 (105)
T ss_dssp HHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT--SEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTE
T ss_pred HHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC--ccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCE
Confidence 3455554443 567999999999999999998876654 2556666 32 247788999999997 45786
Q ss_pred EE
Q psy159 242 PL 243 (285)
Q Consensus 242 ~~ 243 (285)
.+
T Consensus 78 ~i 79 (105)
T 1kte_A 78 CI 79 (105)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 372
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.41 E-value=7.5e-07 Score=71.71 Aligned_cols=41 Identities=2% Similarity=0.069 Sum_probs=35.0
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~ 112 (285)
.+++++|.|||+||+.|+...|.++++.++++..++.++.+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v 86 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGF 86 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEE
Confidence 46889999999999999999999999999986556666654
No 373
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.38 E-value=1e-06 Score=72.63 Aligned_cols=81 Identities=7% Similarity=0.081 Sum_probs=57.7
Q ss_pred CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEE--e---------------------------------------
Q psy159 74 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK--M--------------------------------------- 112 (285)
Q Consensus 74 ~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~--------------------------------------- 112 (285)
+.+++.|+++||++|+++.+.+.++.+. + ++.+.. +
T Consensus 98 k~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g--~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 98 PVIVYVFADPFCPYCKQFWQQARPWVDS-G--KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHT-T--SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CeEEEEEECCCChhHHHHHHHHHHHHhC-C--cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 5688999999999999999999876554 2 243321 1
Q ss_pred -----------C-ChhHHhhhCCCCCCeEEEEc-cccceeecCCCchhHHHHHHHhhhc
Q psy159 113 -----------A-DPRYARKWGVTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLITQK 158 (285)
Q Consensus 113 -----------~-~~~l~~~~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~~l~~fi~~~~ 158 (285)
+ +..+++++||.+.||+++.. +|+.....|....+ .|.+++.+..
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~-~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQK-TLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHH-HHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHH-HHHHHHHHHH
Confidence 0 23466789999999999876 36544677877765 7888876543
No 374
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.38 E-value=8.8e-07 Score=70.85 Aligned_cols=85 Identities=13% Similarity=0.176 Sum_probs=61.4
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-----------------------------~~~l~~ 119 (285)
.+++++|.|| ++||++|....|.+.++.++++..++.++.+ | ...+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 3578999999 9999999999999999999985445555533 2 235788
Q ss_pred hhCCC------CCCeEEEEc-cccce-eecCCC----chhHHHHHHHhhh
Q psy159 120 KWGVT------KLPAVVYFR-HRFPS-IYRGDL----SEEEEVLQWLITQ 157 (285)
Q Consensus 120 ~~~i~------~~Ptl~~~~-~g~~~-~y~g~~----~~~~~l~~fi~~~ 157 (285)
.|++. .+|+++++. +|+.. .+.|.. ..+ ++++.++..
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~-ell~~l~~l 163 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVD-EALRLVKAF 163 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHH-HHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHH-HHHHHHHHh
Confidence 89999 999999985 46542 233432 233 677776643
No 375
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.37 E-value=2.7e-06 Score=65.55 Aligned_cols=41 Identities=7% Similarity=0.241 Sum_probs=36.4
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.++++.+++++.++.+..+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAF 71 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEE
Confidence 36899999999999999999999999999998645888777
No 376
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.37 E-value=1.3e-06 Score=68.78 Aligned_cols=41 Identities=5% Similarity=0.020 Sum_probs=35.0
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~ 112 (285)
.+++++|.||++||+.|....|.+.++.++++..++.++.+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~i 88 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAF 88 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 46889999999999999999999999999996555666654
No 377
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.37 E-value=9.1e-07 Score=70.47 Aligned_cols=73 Identities=10% Similarity=0.232 Sum_probs=58.8
Q ss_pred hCCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHH
Q psy159 177 ETQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAK 224 (285)
Q Consensus 177 ~~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~ 224 (285)
.+++++|.|| ++||++|+...|.+.++.+++++.++.+..+ + ...+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3578999999 9999999999999999999887545777666 2 346888
Q ss_pred hcCCc-----ccCeEEEE-eCCeEE-EEecCC
Q psy159 225 RYSIK-----TFPALVYF-RNGNPL-IFEGEN 249 (285)
Q Consensus 225 ~~~v~-----~~Ptl~~~-~~g~~~-~y~g~~ 249 (285)
.|++. ++|+++++ ++|+.+ .+.|..
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~ 143 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDL 143 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESS
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCC
Confidence 99999 99998888 588766 555643
No 378
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.36 E-value=4.3e-06 Score=64.35 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=36.2
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.++++.+++.+.++.+..+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 70 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAF 70 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 36899999999999999999999999999998645777777
No 379
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.35 E-value=8.8e-07 Score=71.92 Aligned_cols=85 Identities=16% Similarity=0.242 Sum_probs=61.1
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-----------------------------~~~l~~ 119 (285)
.+++++|.|| ++||+.|....|.+.++.++++..++.++.+ | ...+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 3588999999 9999999999999999999884444554433 2 246788
Q ss_pred hhCCC------CCCeEEEEc-cccce-eecCC----CchhHHHHHHHhhh
Q psy159 120 KWGVT------KLPAVVYFR-HRFPS-IYRGD----LSEEEEVLQWLITQ 157 (285)
Q Consensus 120 ~~~i~------~~Ptl~~~~-~g~~~-~y~g~----~~~~~~l~~fi~~~ 157 (285)
.|++. .+|+++++. +|+.. .+.|. +..+ ++++.+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~-ell~~l~~l 183 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVE-ETLRLVKAF 183 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHH-HHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHH-HHHHHHHHh
Confidence 99999 999999995 46542 23343 2333 677666543
No 380
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.34 E-value=2.8e-06 Score=56.12 Aligned_cols=67 Identities=13% Similarity=0.221 Sum_probs=47.1
Q ss_pred EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-ChhHHh---hhCCCCCCeEEEEccccceeecCCCchhHHHHH
Q psy159 77 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYAR---KWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQ 152 (285)
Q Consensus 77 lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~~~l~~---~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~ 152 (285)
++.|+++||++|+++.+.++++ +..+..+.++ ++.+.. ++++.+.|++.+ +|+. ..| .+.+ .+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~--~~g-~~~~-~l~~ 71 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH--WSG-FRPE-RIKQ 71 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE--EES-CCHH-HHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE--EcC-CCHH-HHHH
Confidence 5789999999999999999875 2335556665 444444 799999999874 5643 233 3443 6777
Q ss_pred HH
Q psy159 153 WL 154 (285)
Q Consensus 153 fi 154 (285)
++
T Consensus 72 ~l 73 (75)
T 1r7h_A 72 LQ 73 (75)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 381
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.33 E-value=2.9e-06 Score=67.02 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=36.1
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.++++.+++++.++.++.+
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 87 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 87 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 36789999999999999999999999999998645777777
No 382
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.33 E-value=4.1e-06 Score=64.08 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=53.2
Q ss_pred HHHHhcCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCC-cEEEEeC----------------------ChhHHhhhC
Q psy159 67 DKLLEENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMD-ITFVKMA----------------------DPRYARKWG 122 (285)
Q Consensus 67 ~~~~~~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~-v~~~~~~----------------------~~~l~~~~~ 122 (285)
.++...++.++|.|| +.||+.|....|.+.++.++++..+ +..+.+| +..+++.||
T Consensus 29 ~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 108 (159)
T 2a4v_A 29 KKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLG 108 (159)
T ss_dssp HHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHT
T ss_pred HHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhC
Confidence 333333346778887 8999999999999999998885443 3333332 346788899
Q ss_pred CCCCC-------eEEEEccccc-eeecCCC
Q psy159 123 VTKLP-------AVVYFRHRFP-SIYRGDL 144 (285)
Q Consensus 123 i~~~P-------tl~~~~~g~~-~~y~g~~ 144 (285)
+...| ++++ ++|+. ..+.|..
T Consensus 109 v~~~p~~g~~~~~~li-~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 109 AKKTPLSGSIRSHFIF-VDGKLKFKRVKIS 137 (159)
T ss_dssp CBSSSSSCBCCEEEEE-ETTEEEEEEESCC
T ss_pred CcccccCCccceEEEE-cCCEEEEEEccCC
Confidence 99988 6666 77876 3455543
No 383
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.31 E-value=2.9e-06 Score=67.44 Aligned_cols=72 Identities=13% Similarity=0.280 Sum_probs=57.1
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHHh
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 225 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 225 (285)
+++++|.|| ++||++|....+.+.++.++++..++.+..+ + ...+++.
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 113 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHH
Confidence 578999999 9999999999999999999987545777777 2 2357888
Q ss_pred cCCc------ccCeEEEE-eCCeEE-EEecCC
Q psy159 226 YSIK------TFPALVYF-RNGNPL-IFEGEN 249 (285)
Q Consensus 226 ~~v~------~~Ptl~~~-~~g~~~-~y~g~~ 249 (285)
|++. ++|+++++ ++|+.+ .+.|..
T Consensus 114 ~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~ 145 (197)
T 1qmv_A 114 YGVLKTDEGIAYRGLFIIDGKGVLRQITVNDL 145 (197)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECT
T ss_pred cCCccCCCCceeeEEEEECCCCcEEEEEeCCC
Confidence 9998 79988888 678755 445643
No 384
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.31 E-value=1.4e-06 Score=58.65 Aligned_cols=69 Identities=13% Similarity=0.228 Sum_probs=46.4
Q ss_pred EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-ChhHHh---hhCCCCCCeEEEEccccceeecCCCchhHHHHH
Q psy159 77 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYAR---KWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQ 152 (285)
Q Consensus 77 lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~~~l~~---~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~ 152 (285)
++.|+++||++|+++.+.+++. +..+..+.++ ++.+.. ++|+.++|+++ .+|+.+ +..+.+ .|.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~~~---~g~~~~-~l~~ 71 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDLSW---SGFRPD-MINR 71 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTEEE---ESCCHH-HHGG
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCEEE---ecCCHH-HHHH
Confidence 5789999999999999998875 2235555665 444443 58999999983 466532 233343 5666
Q ss_pred HHhh
Q psy159 153 WLIT 156 (285)
Q Consensus 153 fi~~ 156 (285)
++.+
T Consensus 72 ~l~~ 75 (81)
T 1h75_A 72 LHPA 75 (81)
T ss_dssp GSCC
T ss_pred HHhc
Confidence 6644
No 385
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.29 E-value=1.2e-06 Score=69.34 Aligned_cols=84 Identities=17% Similarity=0.241 Sum_probs=60.0
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MA-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~-----------------------------~~~l~~ 119 (285)
.+++++|.|| ++||++|....|.+.++.++++..++.++. +| ...+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 4578999999 999999999999999999888433444443 22 235788
Q ss_pred hhCCC-----CCCeEEEEc-cccce-eecCC----CchhHHHHHHHhh
Q psy159 120 KWGVT-----KLPAVVYFR-HRFPS-IYRGD----LSEEEEVLQWLIT 156 (285)
Q Consensus 120 ~~~i~-----~~Ptl~~~~-~g~~~-~y~g~----~~~~~~l~~fi~~ 156 (285)
.|++. ..|+++++. +|+.. .+.|. +.. +++++.+..
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~-~~l~~~l~~ 156 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSV-DEILRLIDA 156 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGH-HHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCH-HHHHHHHHH
Confidence 99999 899999995 56652 33342 223 356666654
No 386
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.28 E-value=2.5e-06 Score=66.42 Aligned_cols=32 Identities=19% Similarity=0.394 Sum_probs=28.3
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCc
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDI 209 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~ 209 (285)
.++.++.|+++||++|+.+.|.++++.+++..
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN 53 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999999887653
No 387
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.28 E-value=1.7e-06 Score=69.80 Aligned_cols=84 Identities=14% Similarity=0.217 Sum_probs=59.4
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEEe--C-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~--~-----------------------------~~~l~~ 119 (285)
.+++++|.|| ++||+.|....|.+.+++++++..++.++.+ | ...+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 4578999999 9999999999999999998884334444432 2 245788
Q ss_pred hhCCC-----CCCeEEEEc-cccc-eeecCC----CchhHHHHHHHhh
Q psy159 120 KWGVT-----KLPAVVYFR-HRFP-SIYRGD----LSEEEEVLQWLIT 156 (285)
Q Consensus 120 ~~~i~-----~~Ptl~~~~-~g~~-~~y~g~----~~~~~~l~~fi~~ 156 (285)
.|++. ..|+++++. +|+. ..+.|. ++. +++++.++.
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~-~ell~~l~~ 177 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSV-DEILRIIDA 177 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCH-HHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCH-HHHHHHHHH
Confidence 89998 899988886 4654 223332 223 367777654
No 388
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.25 E-value=1.6e-06 Score=70.20 Aligned_cols=66 Identities=18% Similarity=0.407 Sum_probs=49.5
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE----------------------------------------
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---------------------------------------- 217 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---------------------------------------- 217 (285)
.+++++.|+++||++|+++.|.++++.+. ++.+..+
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 56789999999999999999999998753 2333211
Q ss_pred -------cChHHHHhcCCcccCeEEEEeCCeEEEEecCCc
Q psy159 218 -------QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 250 (285)
Q Consensus 218 -------~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~ 250 (285)
.+..++++++|+++||+ ++.+|. .+.|..+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~--~~~G~~~ 198 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAV-VLSNGT--LVPGYQP 198 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC--EEESCCC
T ss_pred HHHHHHHHHHHHHHHcCCCccCEE-EEcCCe--EecCCCC
Confidence 23457889999999998 566775 4567664
No 389
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.25 E-value=3.7e-06 Score=64.50 Aligned_cols=85 Identities=14% Similarity=0.184 Sum_probs=58.1
Q ss_pred cCCcEEEEEeC-CCChhHHHHHHHHHhHHhhcCCCCcEEE--EeC----------------------ChhHHhhhCCCC-
Q psy159 72 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFV--KMA----------------------DPRYARKWGVTK- 125 (285)
Q Consensus 72 ~~~~~lv~Fya-~~c~~C~~~~~~~~~~a~~~~~~~v~~~--~~~----------------------~~~l~~~~~i~~- 125 (285)
.+++++|.||+ +||++|....|.+.++.++++..++.++ .+| ...+++.|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 35689999998 9999999999999999998854444444 333 345777888877
Q ss_pred -----------CCeEEEEcc-ccce-eecCCCc--hhHHHHHHHhh
Q psy159 126 -----------LPAVVYFRH-RFPS-IYRGDLS--EEEEVLQWLIT 156 (285)
Q Consensus 126 -----------~Ptl~~~~~-g~~~-~y~g~~~--~~~~l~~fi~~ 156 (285)
.|+.+++.. |+.. .+.+... ..+++++.+++
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHH
Confidence 899999864 6542 3433222 11255555543
No 390
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.24 E-value=3e-06 Score=67.60 Aligned_cols=85 Identities=11% Similarity=0.137 Sum_probs=54.1
Q ss_pred cCCcEEEEEeCCCChh-HHHHHHHHHhHHhhcC---CCCcEEE--EeCC-----------------------------hh
Q psy159 72 ENEFVTVFFYETDHKD-SVKVLERLEKIDGETD---NMDITFV--KMAD-----------------------------PR 116 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~-C~~~~~~~~~~a~~~~---~~~v~~~--~~~~-----------------------------~~ 116 (285)
.+++++|.||++||++ |....|.+.++.+++. +.++.++ .+|. ..
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4688999999999997 9999999999877763 1234444 4441 24
Q ss_pred HHhhhCCC-CCC---------------eEEEE-ccccc-eeecCCCchhHHHHHHHhhh
Q psy159 117 YARKWGVT-KLP---------------AVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQ 157 (285)
Q Consensus 117 l~~~~~i~-~~P---------------tl~~~-~~g~~-~~y~g~~~~~~~l~~fi~~~ 157 (285)
+++.||+. +.| +++++ ++|+. ..+.|..+.+ .+.+.|.+.
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~-~~~~~i~~~ 177 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEK-TGVDKIVEH 177 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTT-HHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHH-HHHHHHHHH
Confidence 67788887 344 54555 45766 3466665544 555555443
No 391
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.23 E-value=3.9e-06 Score=65.75 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=36.2
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.++++.+++++.++.+..+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~v 88 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAF 88 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 36799999999999999999999999999998645777777
No 392
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.23 E-value=3.6e-06 Score=68.37 Aligned_cols=85 Identities=14% Similarity=0.201 Sum_probs=59.5
Q ss_pred cCCcEEEEEeC-CCChhHHHHHHHHHhHHhhcCCCCcEEE--EeC-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFV--KMA-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fya-~~c~~C~~~~~~~~~~a~~~~~~~v~~~--~~~-----------------------------~~~l~~ 119 (285)
.+++++|.||+ .||++|....|.+.++.++++..++.++ .+| ...+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 46789999997 9999999999999999999954445554 333 125678
Q ss_pred hhCCC------CCCeEEEEc-cccc-eeecCCCch---hHHHHHHHhh
Q psy159 120 KWGVT------KLPAVVYFR-HRFP-SIYRGDLSE---EEEVLQWLIT 156 (285)
Q Consensus 120 ~~~i~------~~Ptl~~~~-~g~~-~~y~g~~~~---~~~l~~fi~~ 156 (285)
.|++. .+|+.+++. +|+. ..+.|.... .+++++.+..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 89998 899999986 4654 234343221 1256666543
No 393
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.23 E-value=1.4e-06 Score=70.22 Aligned_cols=66 Identities=20% Similarity=0.480 Sum_probs=49.9
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE----------------------------------------
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---------------------------------------- 217 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---------------------------------------- 217 (285)
.+.+++.|+++||++|+++.+.++++.+. ++.+...
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 56789999999999999999999997653 2333321
Q ss_pred -------cChHHHHhcCCcccCeEEEEeCCeEEEEecCCc
Q psy159 218 -------QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 250 (285)
Q Consensus 218 -------~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~ 250 (285)
.+..++++++|++.||+++ .+|+ .+.|..+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~--~~~G~~~ 198 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE--LIGGYLK 198 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC--CCCSCCC
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE--EecCCCC
Confidence 1234678899999999988 7887 5667654
No 394
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=7.6e-06 Score=60.59 Aligned_cols=67 Identities=12% Similarity=0.138 Sum_probs=48.3
Q ss_pred ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-C---h----hHHhhhCCCCCCeEEEEc
Q psy159 62 NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-D---P----RYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 62 ~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~---~----~l~~~~~i~~~Ptl~~~~ 133 (285)
..+.++.++.+.. + +.|+++||++|+++.+.+.+++- .+..+.++ . + .+++.+++.++|+++ .
T Consensus 16 ~~~~~~~~i~~~~-v-vvf~~~~Cp~C~~~~~~L~~~~i-----~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i 86 (130)
T 2cq9_A 16 PVNQIQETISDNC-V-VIFSKTSCSYCTMAKKLFHDMNV-----NYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 86 (130)
T ss_dssp HHHHHHHHHHHSS-E-EEEECSSCSHHHHHHHHHHHHTC-----CCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--E
T ss_pred HHHHHHHHHcCCc-E-EEEEcCCChHHHHHHHHHHHcCC-----CcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--E
Confidence 4556677776653 3 45999999999999999988742 35566666 2 3 377889999999984 3
Q ss_pred cccc
Q psy159 134 HRFP 137 (285)
Q Consensus 134 ~g~~ 137 (285)
+|+.
T Consensus 87 ~G~~ 90 (130)
T 2cq9_A 87 NGTF 90 (130)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6654
No 395
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.21 E-value=5.2e-06 Score=65.69 Aligned_cols=72 Identities=18% Similarity=0.382 Sum_probs=57.3
Q ss_pred hCCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHH
Q psy159 177 ETQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAK 224 (285)
Q Consensus 177 ~~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~ 224 (285)
.+++++|.|| ++||++|....+.+.++.++++..++.+..+ + ...+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 3578999999 9999999999999999999986435666666 1 235788
Q ss_pred hcCCc-----ccCeEEEE-eCCeEE-EEecC
Q psy159 225 RYSIK-----TFPALVYF-RNGNPL-IFEGE 248 (285)
Q Consensus 225 ~~~v~-----~~Ptl~~~-~~g~~~-~y~g~ 248 (285)
.|++. .+|+++++ ++|+.+ .+.|.
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGG
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCC
Confidence 99999 89999999 678765 44453
No 396
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.21 E-value=8.6e-06 Score=63.83 Aligned_cols=41 Identities=10% Similarity=0.093 Sum_probs=36.0
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.++++.+++++.++.+..+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 86 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAF 86 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 36889999999999999999999999999998645777777
No 397
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.19 E-value=9.8e-06 Score=62.08 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=54.8
Q ss_pred CCeEEEEEEC-CCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c----------------------ChHHHHhcCCcc--
Q psy159 178 TQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI--Q----------------------DPQLAKRYSIKT-- 230 (285)
Q Consensus 178 ~~~~~v~F~a-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~----------------------~~~~~~~~~v~~-- 230 (285)
+++++|.||+ .||++|....+.+.++.+++++.++.+..+ + ...+.+.|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 5689999998 999999999999999999987645776666 1 335777888876
Q ss_pred ----------cCeEEEE-eCCeEE-EEec
Q psy159 231 ----------FPALVYF-RNGNPL-IFEG 247 (285)
Q Consensus 231 ----------~Ptl~~~-~~g~~~-~y~g 247 (285)
.|+.+++ ++|+.+ .|.+
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i~~~~~~ 143 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQVVQAWRK 143 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCEEEEECS
T ss_pred ccccccccCcceEEEEECCCCeEEEEEcC
Confidence 8999998 578765 4544
No 398
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.18 E-value=1.5e-05 Score=60.91 Aligned_cols=70 Identities=10% Similarity=0.179 Sum_probs=53.2
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE------------------------cChHHHHhcCCcccC
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI------------------------QDPQLAKRYSIKTFP 232 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------------------~~~~~~~~~~v~~~P 232 (285)
++.++|.|| +.||++|....|.+.++.++++... .+..+ ....+++.|++...|
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 347888887 8999999999999999999887544 44444 134578889998888
Q ss_pred -------eEEEEeCCeEE-EEecCC
Q psy159 233 -------ALVYFRNGNPL-IFEGEN 249 (285)
Q Consensus 233 -------tl~~~~~g~~~-~y~g~~ 249 (285)
++++ ++|+.+ .+.|..
T Consensus 114 ~~g~~~~~~li-~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKFKRVKIS 137 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEEEEESCC
T ss_pred cCCccceEEEE-cCCEEEEEEccCC
Confidence 6777 999866 555644
No 399
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.18 E-value=4.2e-06 Score=65.98 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=35.9
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.+.++.+++++.++.+..+
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 85 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 85 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEE
Confidence 36889999999999999999999999999998645777666
No 400
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.18 E-value=9.1e-06 Score=63.53 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=36.3
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.++++.+++++.++.+..+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 77 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAF 77 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEE
Confidence 36799999999999999999999999999998755777776
No 401
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.18 E-value=1.2e-05 Score=63.16 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=35.8
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.++++.+++++.++.+..+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~i 88 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAF 88 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 36789999999999999999999999999998645777776
No 402
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.17 E-value=7.8e-06 Score=66.26 Aligned_cols=71 Identities=17% Similarity=0.324 Sum_probs=56.9
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHHh
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 225 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 225 (285)
+++++|.|| +.||++|+...+.+.++.++++..++.+..+ + ...+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 578999999 9999999999999999999986435666666 1 2457889
Q ss_pred cCCc------ccCeEEEE-eCCeEE-EEecC
Q psy159 226 YSIK------TFPALVYF-RNGNPL-IFEGE 248 (285)
Q Consensus 226 ~~v~------~~Ptl~~~-~~g~~~-~y~g~ 248 (285)
|++. .+|+++++ ++|+.+ .+.|.
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~ 166 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVND 166 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecC
Confidence 9998 99999999 678765 34454
No 403
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.16 E-value=4.9e-06 Score=66.45 Aligned_cols=72 Identities=15% Similarity=0.248 Sum_probs=57.2
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHHh
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 225 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 225 (285)
+++++|.|| +.||++|....+.+.++.++++..++.+..+ + ...+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 578999999 9999999999999999999986545777776 1 2357888
Q ss_pred cCCc------ccCeEEEE-eCCeEE-EEecCC
Q psy159 226 YSIK------TFPALVYF-RNGNPL-IFEGEN 249 (285)
Q Consensus 226 ~~v~------~~Ptl~~~-~~g~~~-~y~g~~ 249 (285)
|++. ++|+++++ ++|+.+ .+.|..
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~ 147 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDL 147 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECT
T ss_pred cCCccCCCCceeeEEEEECCCCEEEEEEeCCC
Confidence 9998 99998888 578765 444543
No 404
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.16 E-value=7.1e-06 Score=64.89 Aligned_cols=38 Identities=11% Similarity=0.085 Sum_probs=31.4
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEE
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFV 110 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~ 110 (285)
+++..++.|+++||++|+.+.|.+.++.+.+.. ++.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~ 61 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFV 61 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEE
Confidence 457789999999999999999999999888744 34443
No 405
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.16 E-value=1.5e-05 Score=63.94 Aligned_cols=41 Identities=5% Similarity=-0.023 Sum_probs=35.9
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++|.||++||++|+...|.++++.+++++.++.+..+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v 86 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGF 86 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEE
Confidence 36789999999999999999999999999998645777776
No 406
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.16 E-value=9.2e-06 Score=62.56 Aligned_cols=85 Identities=7% Similarity=0.027 Sum_probs=56.4
Q ss_pred cCCcEEEEEeCCC-ChhHHHHHHHHHhHHhhcCCCCcEEEEeC------------------------ChhHHhhhCCCC-
Q psy159 72 ENEFVTVFFYETD-HKDSVKVLERLEKIDGETDNMDITFVKMA------------------------DPRYARKWGVTK- 125 (285)
Q Consensus 72 ~~~~~lv~Fya~~-c~~C~~~~~~~~~~a~~~~~~~v~~~~~~------------------------~~~l~~~~~i~~- 125 (285)
.+++++|.||++| |++|....|.+.++.+++++..+..+.+| +..+++.|++..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 4678999999999 99999999999999988833223333332 235677888876
Q ss_pred -----CCeEEEEc-cccc-eeecCC----CchhHHHHHHHhh
Q psy159 126 -----LPAVVYFR-HRFP-SIYRGD----LSEEEEVLQWLIT 156 (285)
Q Consensus 126 -----~Ptl~~~~-~g~~-~~y~g~----~~~~~~l~~fi~~ 156 (285)
.|+.+++. +|+. ..+.|. ....+++++.+++
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ 164 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKA 164 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 48888886 4654 334332 1111367666654
No 407
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.15 E-value=2.9e-05 Score=58.72 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=76.0
Q ss_pred hhcCCCcccccceeecChhHHHHHHhcCCcEEEE-EeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCC-----hhHHh
Q psy159 46 LTSQDVFEIKNEIEEVNRRMLDKLLEENEFVTVF-FYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD-----PRYAR 119 (285)
Q Consensus 46 i~~~~~p~~~~~v~~l~~~~f~~~~~~~~~~lv~-Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~-----~~l~~ 119 (285)
++.+..|. |.++|.++...+..++-+..++ |....-..-..+.+.++++|+.+++. +.|+.+|. ..+..
T Consensus 8 ~~~~~~PL----V~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk-i~Fv~vd~~~~~~~~~l~ 82 (147)
T 3bj5_A 8 MKHNQLPL----VIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFAFIDSDHTDNQRILE 82 (147)
T ss_dssp -------C----EEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT-CEEEEECTTCGGGHHHHH
T ss_pred hhhccCCe----eEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc-eEEEEEecchHhHHHHHH
Confidence 34566677 9999999999998887776555 44333344677899999999999763 78887773 34667
Q ss_pred hhCCCC--CCeEEEEcc---ccceeec-CCCchhHHHHHHHhhhcc
Q psy159 120 KWGVTK--LPAVVYFRH---RFPSIYR-GDLSEEEEVLQWLITQKT 159 (285)
Q Consensus 120 ~~~i~~--~Ptl~~~~~---g~~~~y~-g~~~~~~~l~~fi~~~~~ 159 (285)
.||+.. .|++.++.. ++.+.+. +..+.+ .|.+|+.+.+.
T Consensus 83 ~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~-~i~~Fv~d~l~ 127 (147)
T 3bj5_A 83 FFGLKKEECPAVRLITLEEEMTKYKPESEELTAE-RITEFCHRFLE 127 (147)
T ss_dssp HTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHH-HHHHHHHHHHT
T ss_pred HcCCCcccCCEEEEEecccccccCCCCcccCCHH-HHHHHHHHHHc
Confidence 899986 899999874 3334444 677764 89999998764
No 408
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.15 E-value=9.2e-06 Score=65.93 Aligned_cols=73 Identities=16% Similarity=0.335 Sum_probs=57.5
Q ss_pred hCCeEEEEEEC-CCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHH
Q psy159 177 ETQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAK 224 (285)
Q Consensus 177 ~~~~~~v~F~a-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~ 224 (285)
.+++++|.||+ .||++|....|.+.++.+++++.++.++.| + ...+.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 36789999996 999999999999999999997545777777 2 124678
Q ss_pred hcCCc------ccCeEEEE-eCCeEE-EEecCC
Q psy159 225 RYSIK------TFPALVYF-RNGNPL-IFEGEN 249 (285)
Q Consensus 225 ~~~v~------~~Ptl~~~-~~g~~~-~y~g~~ 249 (285)
.|++. .+|+.+++ ++|+.+ .+.|..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~ 180 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDK 180 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECT
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCC
Confidence 89998 89999888 578765 555543
No 409
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.14 E-value=1.1e-05 Score=60.95 Aligned_cols=67 Identities=12% Similarity=0.149 Sum_probs=48.8
Q ss_pred ChhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-C---h----hHHhhhCCCCCCeEEEEc
Q psy159 62 NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-D---P----RYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 62 ~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~---~----~l~~~~~i~~~Ptl~~~~ 133 (285)
..+.++.++.+. .+ +.|+++||++|+++.+.+++++- .+..+.++ . + .+++.+|+.++|+++ .
T Consensus 38 ~~~~~~~~i~~~-~V-vvf~~~~Cp~C~~~k~~L~~~~i-----~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i 108 (146)
T 2ht9_A 38 PVNQIQETISDN-CV-VIFSKTSCSYCTMAKKLFHDMNV-----NYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 108 (146)
T ss_dssp CHHHHHHHHHHC-SE-EEEECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--E
T ss_pred HHHHHHHHhcCC-CE-EEEECCCChhHHHHHHHHHHcCC-----CeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--E
Confidence 356677777665 34 45999999999999999988742 35556665 2 3 377889999999984 3
Q ss_pred cccc
Q psy159 134 HRFP 137 (285)
Q Consensus 134 ~g~~ 137 (285)
+|+.
T Consensus 109 ~G~~ 112 (146)
T 2ht9_A 109 NGTF 112 (146)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6653
No 410
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.13 E-value=7.2e-06 Score=55.04 Aligned_cols=54 Identities=13% Similarity=0.349 Sum_probs=38.3
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cChHHHH---hcCCcccCeEEEEeCCeE
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQLAK---RYSIKTFPALVYFRNGNP 242 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~~~---~~~v~~~Ptl~~~~~g~~ 242 (285)
++.|+++||++|+++.+.++++.. .+....+ .++.+.+ ++++.++|++ +.+|+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~~i-----~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~ 60 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENRGF-----DFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS 60 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTC-----CCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE
T ss_pred EEEEcCCCChhHHHHHHHHHHCCC-----CeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE
Confidence 577999999999999999887531 2334444 3444433 5899999998 347764
No 411
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.13 E-value=3.3e-06 Score=60.98 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=46.1
Q ss_pred HHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-C-------hhHHhhhCCCCCCeEEEEcccc
Q psy159 65 MLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-D-------PRYARKWGVTKLPAVVYFRHRF 136 (285)
Q Consensus 65 ~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~-------~~l~~~~~i~~~Ptl~~~~~g~ 136 (285)
.++.++.+ ..++.|+++||++|+++.+.+++++... + .+..+.++ + ..+++.+|+.++|++++ +|+
T Consensus 11 ~~~~~i~~--~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~-~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~ 84 (114)
T 2hze_A 11 FVQQRLAN--NKVTIFVKYTCPFCRNALDILNKFSFKR-G-AYEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKT 84 (114)
T ss_dssp HHHTTCCT--TCEEEEECTTCHHHHHHHHHHTTSCBCT-T-SEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTE
T ss_pred HHHHHhcc--CCEEEEEeCCChhHHHHHHHHHHcCCCc-C-ceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCE
Confidence 33444433 3468899999999999999988764331 1 15556665 3 26888999999998743 665
Q ss_pred c
Q psy159 137 P 137 (285)
Q Consensus 137 ~ 137 (285)
.
T Consensus 85 ~ 85 (114)
T 2hze_A 85 S 85 (114)
T ss_dssp E
T ss_pred E
Confidence 4
No 412
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.11 E-value=1.1e-05 Score=61.02 Aligned_cols=69 Identities=17% Similarity=0.289 Sum_probs=49.2
Q ss_pred ccHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cC---h----HHHHhcCCcccCeEEEE
Q psy159 166 ITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD---P----QLAKRYSIKTFPALVYF 237 (285)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~---~----~~~~~~~v~~~Ptl~~~ 237 (285)
-..+.+++.+.+.. + +.|+++||++|+.+.+.+++++.. +....+ .. + .+.+.+++.++|+++
T Consensus 37 ~~~~~~~~~i~~~~-V-vvf~~~~Cp~C~~~k~~L~~~~i~-----~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if-- 107 (146)
T 2ht9_A 37 APVNQIQETISDNC-V-VIFSKTSCSYCTMAKKLFHDMNVN-----YKVVELDLLEYGNQFQDALYKMTGERTVPRIF-- 107 (146)
T ss_dssp CCHHHHHHHHHHCS-E-EEEECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--
T ss_pred HHHHHHHHHhcCCC-E-EEEECCCChhHHHHHHHHHHcCCC-----eEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--
Confidence 34566777777654 3 449999999999999999988533 334455 22 3 377889999999984
Q ss_pred eCCeEE
Q psy159 238 RNGNPL 243 (285)
Q Consensus 238 ~~g~~~ 243 (285)
.+|+.+
T Consensus 108 i~G~~i 113 (146)
T 2ht9_A 108 VNGTFI 113 (146)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 488744
No 413
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=1.3e-05 Score=59.30 Aligned_cols=68 Identities=18% Similarity=0.310 Sum_probs=48.1
Q ss_pred cHHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc-C---h----HHHHhcCCcccCeEEEEe
Q psy159 167 TRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ-D---P----QLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~-~---~----~~~~~~~v~~~Ptl~~~~ 238 (285)
..+.+++.+..+. + +.|+++||++|+.+.+.++++... +....++ . + .+.+.+++.++|+++ .
T Consensus 16 ~~~~~~~~i~~~~-v-vvf~~~~Cp~C~~~~~~L~~~~i~-----~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i 86 (130)
T 2cq9_A 16 PVNQIQETISDNC-V-VIFSKTSCSYCTMAKKLFHDMNVN-----YKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 86 (130)
T ss_dssp HHHHHHHHHHHSS-E-EEEECSSCSHHHHHHHHHHHHTCC-----CEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--E
T ss_pred HHHHHHHHHcCCc-E-EEEEcCCChHHHHHHHHHHHcCCC-----cEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--E
Confidence 3455666676654 3 449999999999999999987532 3445552 2 3 277889999999984 4
Q ss_pred CCeEE
Q psy159 239 NGNPL 243 (285)
Q Consensus 239 ~g~~~ 243 (285)
+|+.+
T Consensus 87 ~G~~i 91 (130)
T 2cq9_A 87 NGTFI 91 (130)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88754
No 414
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.09 E-value=5e-06 Score=64.77 Aligned_cols=65 Identities=11% Similarity=0.148 Sum_probs=48.6
Q ss_pred cCCcEEEEEeCCC-ChhHHHHHHHHHhHHhhcCCCCcEEEEeC-----------------------ChhHHhhhCCCCC-
Q psy159 72 ENEFVTVFFYETD-HKDSVKVLERLEKIDGETDNMDITFVKMA-----------------------DPRYARKWGVTKL- 126 (285)
Q Consensus 72 ~~~~~lv~Fya~~-c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-----------------------~~~l~~~~~i~~~- 126 (285)
.+++++|.||++| |+.|....|.+.++.++ ++..+..+.+| +..+++.|++...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 4678999999999 99999999999999877 44333333333 2457888999876
Q ss_pred --------CeEEEEc-cccc
Q psy159 127 --------PAVVYFR-HRFP 137 (285)
Q Consensus 127 --------Ptl~~~~-~g~~ 137 (285)
|+.+++. +|+.
T Consensus 122 ~~~~g~~~p~~~lid~~G~I 141 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGADGNV 141 (175)
T ss_dssp STTTTSBCSEEEEECTTSBE
T ss_pred cccCCcccceEEEECCCCeE
Confidence 7777775 5665
No 415
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.08 E-value=1.6e-05 Score=64.13 Aligned_cols=72 Identities=19% Similarity=0.372 Sum_probs=55.6
Q ss_pred hCCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHH
Q psy159 177 ETQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAK 224 (285)
Q Consensus 177 ~~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~ 224 (285)
.+++++|.|| +.||++|....+.+.++.++++..++.+..| + ...+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 3578999999 9999999999999999999986435666655 1 345788
Q ss_pred hcCCc-----ccCeEEEE-eCCeEE-EEecC
Q psy159 225 RYSIK-----TFPALVYF-RNGNPL-IFEGE 248 (285)
Q Consensus 225 ~~~v~-----~~Ptl~~~-~~g~~~-~y~g~ 248 (285)
.|++. ..|+++++ ++|+.+ .+.|.
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~ 161 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNN 161 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEEC
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecC
Confidence 99998 89988888 577755 44443
No 416
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.07 E-value=1.2e-05 Score=52.90 Aligned_cols=54 Identities=17% Similarity=0.295 Sum_probs=39.4
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cChHHHH---hcCCcccCeEEEEeCCeE
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQLAK---RYSIKTFPALVYFRNGNP 242 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~~~---~~~v~~~Ptl~~~~~g~~ 242 (285)
++.|+++||++|+++.+.++++.- .+....+ .++...+ ++++.++|+++. +|+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~i-----~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~ 60 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRAGL-----AYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH 60 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTC-----CCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE
T ss_pred EEEEeCCCChHHHHHHHHHHHcCC-----CcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE
Confidence 567899999999999999987631 2344444 3444444 799999999874 7763
No 417
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.07 E-value=7.9e-06 Score=59.40 Aligned_cols=69 Identities=13% Similarity=0.117 Sum_probs=46.7
Q ss_pred hhHHHHHHhcCCcEEEEEeCCCChhHHHH-HHHHHhHHhhcCCCCcEEEEeC-C-------hhHHhhhCCCCCCeEEEEc
Q psy159 63 RRMLDKLLEENEFVTVFFYETDHKDSVKV-LERLEKIDGETDNMDITFVKMA-D-------PRYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 63 ~~~f~~~~~~~~~~lv~Fya~~c~~C~~~-~~~~~~~a~~~~~~~v~~~~~~-~-------~~l~~~~~i~~~Ptl~~~~ 133 (285)
.+.+++++.+.+ ++.|+++||++|+++ .+.+++.+. ....+..+.++ + ..+++.+|+.++|++ |.
T Consensus 15 ~~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~--~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi 88 (118)
T 3c1r_A 15 IKHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV--PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YI 88 (118)
T ss_dssp HHHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC--CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC--CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 345666665553 567999999999999 888876541 11234455555 2 257888999999987 44
Q ss_pred cccc
Q psy159 134 HRFP 137 (285)
Q Consensus 134 ~g~~ 137 (285)
+|+.
T Consensus 89 ~g~~ 92 (118)
T 3c1r_A 89 NGKH 92 (118)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6654
No 418
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.06 E-value=8e-06 Score=58.96 Aligned_cols=59 Identities=20% Similarity=0.311 Sum_probs=43.0
Q ss_pred EEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cC-------hHHHHhcCCcccCeEEEEeCCeEE
Q psy159 181 LAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD-------PQLAKRYSIKTFPALVYFRNGNPL 243 (285)
Q Consensus 181 ~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~-------~~~~~~~~v~~~Ptl~~~~~g~~~ 243 (285)
.++.|+++||++|+.+.+.+++++... + ++....+ .+ ..+.+.+++.++|++++ +|+.+
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~-~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~i 86 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR-G-AYEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSI 86 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT-T-SEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc-C-ceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEE
Confidence 467899999999999999998775442 1 2444555 33 26888899999998743 78754
No 419
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.05 E-value=4.8e-06 Score=63.73 Aligned_cols=40 Identities=10% Similarity=0.171 Sum_probs=27.2
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEE
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK 111 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~ 111 (285)
.++++++.|| +.||+.|....|.+.++.++++..++.++.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~ 69 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLG 69 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEee
Confidence 4678889998 999999999999999998888666666553
No 420
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.04 E-value=1.5e-05 Score=65.50 Aligned_cols=70 Identities=14% Similarity=0.229 Sum_probs=52.1
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE----------------------------------------
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---------------------------------------- 217 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---------------------------------------- 217 (285)
.+..++.|+++||++|+++.+.+.++.+. + ++.+..+
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 34578999999999999999999887654 2 4555432
Q ss_pred -------------cChHHHHhcCCcccCeEEEEe-CCeEEEEecCCc
Q psy159 218 -------------QDPQLAKRYSIKTFPALVYFR-NGNPLIFEGENK 250 (285)
Q Consensus 218 -------------~~~~~~~~~~v~~~Ptl~~~~-~g~~~~y~g~~~ 250 (285)
.+..++++++|+++||+++.. +|+.....|...
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~ 220 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPD 220 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCC
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCC
Confidence 123356789999999999986 476556778765
No 421
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.03 E-value=1.5e-05 Score=61.62 Aligned_cols=41 Identities=10% Similarity=0.133 Sum_probs=32.5
Q ss_pred cCCcEEEEEeCCCCh-hHHHHHHHHHhHHhhcCCC--CcEEEEe
Q psy159 72 ENEFVTVFFYETDHK-DSVKVLERLEKIDGETDNM--DITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~-~C~~~~~~~~~~a~~~~~~--~v~~~~~ 112 (285)
.+++++|.||++||+ .|....|.+.++.+.++.. ++.++.+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~i 75 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISF 75 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEE
Confidence 467899999999999 9999999999998888332 2555443
No 422
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.01 E-value=2.5e-05 Score=60.37 Aligned_cols=41 Identities=12% Similarity=0.345 Sum_probs=34.0
Q ss_pred hCCeEEEEEECCCCh-hhHHHHHHHHHHHhhcCcCC--eEEEEE
Q psy159 177 ETQYLAVYFYKLNCN-ICDQILEGLEKVDDECDIYG--IHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~-~c~~~~~~~~~la~~~~~~~--i~~~~i 217 (285)
.+++++|.||++||+ +|....+.+.++.+++.... +.+..+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~i 75 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISF 75 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEE
Confidence 367899999999999 99999999999988877532 677766
No 423
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.98 E-value=3.1e-05 Score=53.31 Aligned_cols=68 Identities=15% Similarity=0.135 Sum_probs=48.5
Q ss_pred EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC------C----hhHHhhhCCCCCCeEEEEccccceeecCCCch
Q psy159 77 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA------D----PRYARKWGVTKLPAVVYFRHRFPSIYRGDLSE 146 (285)
Q Consensus 77 lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~------~----~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~ 146 (285)
++.|+++||++|+++.+.+++++- .+..+.++ . ..+.+.+++.++|++.+ +|+. -|..+.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi-----~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~---i~G~~~ 83 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGV-----DFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH---VLGYNE 83 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE---EESCCH
T ss_pred EEEEECCCChHHHHHHHHHHHcCC-----CcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE---EeCCCH
Confidence 578999999999999999988742 34555555 1 55667889999999876 5643 233444
Q ss_pred hHHHHHHHh
Q psy159 147 EEEVLQWLI 155 (285)
Q Consensus 147 ~~~l~~fi~ 155 (285)
+ .+.+++.
T Consensus 84 ~-~l~~~l~ 91 (92)
T 3ic4_A 84 E-KLKELIR 91 (92)
T ss_dssp H-HHHHHHH
T ss_pred H-HHHHHhc
Confidence 3 7877764
No 424
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.98 E-value=2.7e-05 Score=55.22 Aligned_cols=66 Identities=26% Similarity=0.437 Sum_probs=44.0
Q ss_pred HHHHHHHHhCCeEEEEEEC-----CCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cChH----HHHhcCCcccCeEEEEe
Q psy159 169 VMLETMVEETQYLAVYFYK-----LNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQ----LAKRYSIKTFPALVYFR 238 (285)
Q Consensus 169 ~~~~~~~~~~~~~~v~F~a-----~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~----~~~~~~v~~~Ptl~~~~ 238 (285)
+.+++.+++++ ++ .|+. +||++|+++.+.+.++... +....+ .++. +.+.+++.++|++ |.
T Consensus 8 ~~~~~~i~~~~-vv-vf~~g~~~~~~C~~C~~~~~~L~~~~i~-----~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~i 78 (105)
T 2yan_A 8 ERLKVLTNKAS-VM-LFMKGNKQEAKCGFSKQILEILNSTGVE-----YETFDILEDEEVRQGLKAYSNWPTYPQL--YV 78 (105)
T ss_dssp HHHHHHHTSSS-EE-EEESBCSSSBCTTHHHHHHHHHHHHTCC-----CEEEEGGGCHHHHHHHHHHHTCCSSCEE--EE
T ss_pred HHHHHHhccCC-EE-EEEecCCCCCCCccHHHHHHHHHHCCCC-----eEEEECCCCHHHHHHHHHHHCCCCCCeE--EE
Confidence 34555665544 44 4676 9999999999999887422 334444 3444 4556789999998 45
Q ss_pred CCeEE
Q psy159 239 NGNPL 243 (285)
Q Consensus 239 ~g~~~ 243 (285)
+|+.+
T Consensus 79 ~g~~i 83 (105)
T 2yan_A 79 KGELV 83 (105)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88643
No 425
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.97 E-value=3.1e-05 Score=60.53 Aligned_cols=66 Identities=12% Similarity=0.208 Sum_probs=48.2
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC----------------------ChhHHhhhCCCC-
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MA----------------------DPRYARKWGVTK- 125 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~----------------------~~~l~~~~~i~~- 125 (285)
.+++++|.|| +.||+.|....|.+.++.++++..++.++. +| ...+++.|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 3567888887 999999999999999999998554555443 23 345777788753
Q ss_pred -----------CCeEEEEc-cccc
Q psy159 126 -----------LPAVVYFR-HRFP 137 (285)
Q Consensus 126 -----------~Ptl~~~~-~g~~ 137 (285)
.|+.+++. +|+.
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I 153 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRI 153 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBE
T ss_pred ccccCcccCCcceEEEEECCCCEE
Confidence 47788876 4654
No 426
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.97 E-value=2.4e-06 Score=65.99 Aligned_cols=47 Identities=11% Similarity=0.133 Sum_probs=36.6
Q ss_pred HHHHHHhcCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEE
Q psy159 65 MLDKLLEENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK 111 (285)
Q Consensus 65 ~f~~~~~~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~ 111 (285)
++.++...++++++.|| +.||+.|....|.+.++.++++..++.++.
T Consensus 25 ~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~ 72 (164)
T 4gqc_A 25 NLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLA 72 (164)
T ss_dssp EHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEE
T ss_pred EHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEE
Confidence 35555667788888888 999999999888888888888665665553
No 427
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.97 E-value=3.3e-05 Score=55.50 Aligned_cols=65 Identities=20% Similarity=0.255 Sum_probs=44.8
Q ss_pred hHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCC-----hh----HHhhhCCCCCCeEEEEcc
Q psy159 64 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD-----PR----YARKWGVTKLPAVVYFRH 134 (285)
Q Consensus 64 ~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~-----~~----l~~~~~i~~~Ptl~~~~~ 134 (285)
+.+++++.+++ ++.|+++||++|+++.+.+++.+- ....+.++. +. +.+..|...+|++ |.+
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~i-----~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~ 80 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRLGV-----QPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVC 80 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHTTC-----CCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHcCC-----CCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 44556666655 677999999999999999987632 244555542 22 4555799999998 446
Q ss_pred ccc
Q psy159 135 RFP 137 (285)
Q Consensus 135 g~~ 137 (285)
|+.
T Consensus 81 g~~ 83 (113)
T 3rhb_A 81 GKH 83 (113)
T ss_dssp TEE
T ss_pred CEE
Confidence 643
No 428
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.96 E-value=2.2e-05 Score=57.06 Aligned_cols=69 Identities=16% Similarity=0.278 Sum_probs=46.0
Q ss_pred HHHHHHHHhCCeEEEEEECCCChhhHHH-HHHHHHHHhhcCcCCeEEEEE-cC-------hHHHHhcCCcccCeEEEEeC
Q psy159 169 VMLETMVEETQYLAVYFYKLNCNICDQI-LEGLEKVDDECDIYGIHMVKI-QD-------PQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 169 ~~~~~~~~~~~~~~v~F~a~~c~~c~~~-~~~~~~la~~~~~~~i~~~~i-~~-------~~~~~~~~v~~~Ptl~~~~~ 239 (285)
+.+++.+...+ ++.|+++||++|+++ .+.+++++. ....+....+ .. ..+.+.++++++|++ |.+
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~--~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~ 89 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV--PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YIN 89 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC--CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC--CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 34555565554 556999999999999 888877652 1012334444 22 257888999999987 558
Q ss_pred CeEE
Q psy159 240 GNPL 243 (285)
Q Consensus 240 g~~~ 243 (285)
|+.+
T Consensus 90 g~~i 93 (118)
T 3c1r_A 90 GKHI 93 (118)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 8754
No 429
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.95 E-value=6.1e-05 Score=57.85 Aligned_cols=69 Identities=9% Similarity=0.162 Sum_probs=53.1
Q ss_pred hCCeEEEEEECCC-ChhhHHHHHHHHHHHhhcCcCCeEEEEE--c------------------------ChHHHHhcCCc
Q psy159 177 ETQYLAVYFYKLN-CNICDQILEGLEKVDDECDIYGIHMVKI--Q------------------------DPQLAKRYSIK 229 (285)
Q Consensus 177 ~~~~~~v~F~a~~-c~~c~~~~~~~~~la~~~~~~~i~~~~i--~------------------------~~~~~~~~~v~ 229 (285)
.+++++|.||+.| |++|+...|.++++.+++. ++.+..+ + ...+.+.|++.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~ 120 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLG--DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVY 120 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHS--SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcC--CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCc
Confidence 3678999999999 9999999999999999883 5666666 1 23577788887
Q ss_pred c------cCeEEEE-eCCeEE-EEec
Q psy159 230 T------FPALVYF-RNGNPL-IFEG 247 (285)
Q Consensus 230 ~------~Ptl~~~-~~g~~~-~y~g 247 (285)
. .|+.+++ ++|+.+ .+.|
T Consensus 121 ~~~~g~~~p~~~lid~~G~i~~~~~g 146 (167)
T 2jsy_A 121 IKELRLLARSVFVLDENGKVVYAEYV 146 (167)
T ss_dssp BTTTCSBCCEEEEECTTSCEEEEEEC
T ss_pred cccCCceeeEEEEEcCCCcEEEEEec
Confidence 6 4988888 578765 5554
No 430
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.94 E-value=3.6e-05 Score=54.58 Aligned_cols=65 Identities=15% Similarity=0.136 Sum_probs=44.5
Q ss_pred hHHHHHHhcCCcEEEEEeC-----CCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-Chh----HHhhhCCCCCCeEEEEc
Q psy159 64 RMLDKLLEENEFVTVFFYE-----TDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPR----YARKWGVTKLPAVVYFR 133 (285)
Q Consensus 64 ~~f~~~~~~~~~~lv~Fya-----~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~~~----l~~~~~i~~~Ptl~~~~ 133 (285)
+.++.++.++ ++ +.|++ +||++|+++.+.+.+.+ ..+..+.++ ++. +.+.+|..++|+++ .
T Consensus 8 ~~~~~~i~~~-~v-vvf~~g~~~~~~C~~C~~~~~~L~~~~-----i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~--i 78 (105)
T 2yan_A 8 ERLKVLTNKA-SV-MLFMKGNKQEAKCGFSKQILEILNSTG-----VEYETFDILEDEEVRQGLKAYSNWPTYPQLY--V 78 (105)
T ss_dssp HHHHHHHTSS-SE-EEEESBCSSSBCTTHHHHHHHHHHHHT-----CCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--E
T ss_pred HHHHHHhccC-CE-EEEEecCCCCCCCccHHHHHHHHHHCC-----CCeEEEECCCCHHHHHHHHHHHCCCCCCeEE--E
Confidence 4566666655 44 44777 99999999999998873 234455555 433 55668999999983 4
Q ss_pred cccc
Q psy159 134 HRFP 137 (285)
Q Consensus 134 ~g~~ 137 (285)
+|+.
T Consensus 79 ~g~~ 82 (105)
T 2yan_A 79 KGEL 82 (105)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6643
No 431
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.92 E-value=3.6e-05 Score=59.82 Aligned_cols=67 Identities=10% Similarity=0.220 Sum_probs=51.6
Q ss_pred CCeEEEEEECCC-ChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------ChHHHHhcCCccc
Q psy159 178 TQYLAVYFYKLN-CNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------DPQLAKRYSIKTF 231 (285)
Q Consensus 178 ~~~~~v~F~a~~-c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------~~~~~~~~~v~~~ 231 (285)
+++++|.||+.| |++|+...|.+.++.++ . ++.+..+ + ...+.+.|++...
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 578999999999 99999999999999887 4 4555555 2 2457888999876
Q ss_pred ---------CeEEEE-eCCeEE-EEec
Q psy159 232 ---------PALVYF-RNGNPL-IFEG 247 (285)
Q Consensus 232 ---------Ptl~~~-~~g~~~-~y~g 247 (285)
|+.+++ ++|+.+ .+.|
T Consensus 121 ~~~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 121 DGPMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp SSTTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred ccccCCcccceEEEECCCCeEEEEEEC
Confidence 777777 578766 4543
No 432
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.92 E-value=3.2e-05 Score=61.54 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=32.2
Q ss_pred CCeEEEEEECCCChh-hHHHHHHHHHHHhhcCc---CCeEEEEE
Q psy159 178 TQYLAVYFYKLNCNI-CDQILEGLEKVDDECDI---YGIHMVKI 217 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~-c~~~~~~~~~la~~~~~---~~i~~~~i 217 (285)
+++++|.||++||++ |....|.+.++.+++.. .++.+..+
T Consensus 41 Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~I 84 (200)
T 2b7k_A 41 GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFI 84 (200)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEE
Confidence 578999999999997 99999999997776642 25666666
No 433
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.91 E-value=4.2e-05 Score=54.93 Aligned_cols=66 Identities=21% Similarity=0.410 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEcC-----hH----HHHhcCCcccCeEEEEeC
Q psy159 169 VMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQD-----PQ----LAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 169 ~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~-----~~----~~~~~~v~~~Ptl~~~~~ 239 (285)
+.+++.+.+++ ++.|+++||++|+++.+.+++++..| ....++. +. +.+..+..++|++ |.+
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~i~~-----~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~ 80 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRLGVQP-----LVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVC 80 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHTTCCC-----EEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHcCCCC-----eEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 34555666655 56789999999999999998875433 3444421 22 4455689999998 458
Q ss_pred CeEE
Q psy159 240 GNPL 243 (285)
Q Consensus 240 g~~~ 243 (285)
|+.+
T Consensus 81 g~~i 84 (113)
T 3rhb_A 81 GKHI 84 (113)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 8644
No 434
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.89 E-value=4.5e-05 Score=60.15 Aligned_cols=40 Identities=13% Similarity=0.281 Sum_probs=33.9
Q ss_pred hCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 177 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
+.++.++.|+++||++|+.+.|.+.++.+++.+ ++.|..+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRL 63 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEE
Confidence 357789999999999999999999999999875 6666543
No 435
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.88 E-value=5.6e-06 Score=56.80 Aligned_cols=55 Identities=9% Similarity=0.181 Sum_probs=40.3
Q ss_pred EEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---ChhHHhhh-CCCCCCeEEEEccccc
Q psy159 76 VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKW-GVTKLPAVVYFRHRFP 137 (285)
Q Consensus 76 ~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~~~l~~~~-~i~~~Ptl~~~~~g~~ 137 (285)
-++.|+++||++|+++.+.+++.+- .+..+.++ ...+.+.+ ++.++|++++ +|+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~i-----~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~--~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKGV-----KYTDIDASTSLRQEMVQRANGRNTFPQIFI--GDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHTC-----CEEEECSCHHHHHHHHHHHHSSCCSCEEEE--TTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcCC-----CcEEEECCHHHHHHHHHHhCCCCCcCEEEE--CCEE
Confidence 3678999999999999999987632 23444444 34577788 9999999843 6643
No 436
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.88 E-value=0.00011 Score=57.39 Aligned_cols=70 Identities=14% Similarity=0.190 Sum_probs=52.7
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE------------------------cChHHHHhcCCcc--
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI------------------------QDPQLAKRYSIKT-- 230 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------------------~~~~~~~~~~v~~-- 230 (285)
+++++|.|| +.||+.|....+.+.++.++++..++.+..+ ....+++.|++..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 567888888 9999999999999999999987645776666 1345677787753
Q ss_pred ----------cCeEEEE-eCCeEE-EEec
Q psy159 231 ----------FPALVYF-RNGNPL-IFEG 247 (285)
Q Consensus 231 ----------~Ptl~~~-~~g~~~-~y~g 247 (285)
.|+.+++ ++|+.+ .+.+
T Consensus 131 ~~~g~~~~~~~p~~~lID~~G~I~~~~~~ 159 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGPTHRIVEAWRQ 159 (179)
T ss_dssp CCC--CEEEECCEEEEECTTSBEEEEECS
T ss_pred cccCcccCCcceEEEEECCCCEEEEEEcC
Confidence 5878888 578765 4544
No 437
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.87 E-value=4.2e-05 Score=60.13 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=54.9
Q ss_pred cCCcEEEEEeC-CCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC--------------------------ChhHHhhhC
Q psy159 72 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFVK--MA--------------------------DPRYARKWG 122 (285)
Q Consensus 72 ~~~~~lv~Fya-~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~--------------------------~~~l~~~~~ 122 (285)
.+++++|.||+ .||+.|....|.+.++.++++..++.++. +| ...+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 36789999995 89999999999999998877433444442 22 234556677
Q ss_pred CC------CCCeEEEEc-cccc-eeecCCC----chhHHHHHHHhh
Q psy159 123 VT------KLPAVVYFR-HRFP-SIYRGDL----SEEEEVLQWLIT 156 (285)
Q Consensus 123 i~------~~Ptl~~~~-~g~~-~~y~g~~----~~~~~l~~fi~~ 156 (285)
+. ..|+.+++. +|+. ..+.|.. .. +++++.++.
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~-~~l~~~l~~ 153 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDA-SDLLRKIKA 153 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCH-HHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCH-HHHHHHHHH
Confidence 75 268888886 4654 2344432 23 356666654
No 438
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.87 E-value=4.3e-05 Score=57.76 Aligned_cols=81 Identities=11% Similarity=0.198 Sum_probs=58.0
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEE-----------------------------------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFV----------------------------------------- 110 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~----------------------------------------- 110 (285)
+++..+|.|++++|++|+++.+.++++.+ ..+.+.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l~~----v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~ 88 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKMTD----VTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGG 88 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTCCS----EEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhcCc----eEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCcc
Confidence 45778999999999999999999876521 111111
Q ss_pred -EeC-----ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHHHhhhccc
Q psy159 111 -KMA-----DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTE 160 (285)
Q Consensus 111 -~~~-----~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~fi~~~~~~ 160 (285)
.++ +..+++++||+++||+++ .+|+ ...|....+ .|.+.|.+....
T Consensus 89 ~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~--~i~G~~~~~-~l~~~i~~~~~~ 140 (147)
T 3gv1_A 89 SICDNPVAETTSLGEQFGFNGTPTLVF-PNGR--TQSGYSPMP-QLEEIIRKNQQE 140 (147)
T ss_dssp CCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC--EEESCCCTT-HHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE--EeeCCCCHH-HHHHHHHHHHHh
Confidence 000 356778899999999987 6675 467877775 888888776543
No 439
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.85 E-value=3.6e-05 Score=62.40 Aligned_cols=84 Identities=12% Similarity=0.180 Sum_probs=56.1
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEE--EeC-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFV--KMA-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~--~~~-----------------------------~~~l~~ 119 (285)
.+++++|.|| +.||+.|....|.+.++.++++..++.++ .+| ...+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 4578999999 99999999999999998887743334433 222 234667
Q ss_pred hhCC-----CCCCeEEEEcc-ccce-eecCC----CchhHHHHHHHhh
Q psy159 120 KWGV-----TKLPAVVYFRH-RFPS-IYRGD----LSEEEEVLQWLIT 156 (285)
Q Consensus 120 ~~~i-----~~~Ptl~~~~~-g~~~-~y~g~----~~~~~~l~~fi~~ 156 (285)
.|++ ...|+.+++.. |+.. .+.|. ... +++++.++.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~-~ell~~l~~ 181 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNV-QEVLRTIDS 181 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCH-HHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCH-HHHHHHHHH
Confidence 7887 36798888864 5542 23332 233 367776654
No 440
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.85 E-value=1.1e-05 Score=62.59 Aligned_cols=62 Identities=6% Similarity=0.078 Sum_probs=41.2
Q ss_pred HHHHHhcCCcEEEEEeCCCChhHHHH-HHHHHhHHhhcCCCCcE-EEE--eCC----hhHHhhhCCC-CCC
Q psy159 66 LDKLLEENEFVTVFFYETDHKDSVKV-LERLEKIDGETDNMDIT-FVK--MAD----PRYARKWGVT-KLP 127 (285)
Q Consensus 66 f~~~~~~~~~~lv~Fya~~c~~C~~~-~~~~~~~a~~~~~~~v~-~~~--~~~----~~l~~~~~i~-~~P 127 (285)
+.++...++.+|+.|++.||+.|..- .|.+.++.++++..++. ++. .|. ...++++++. .+|
T Consensus 37 l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp 107 (171)
T 2pwj_A 37 VNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIE 107 (171)
T ss_dssp HHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred HHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceE
Confidence 33433333467788999999999998 99999998888444444 443 443 3345566663 566
No 441
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.81 E-value=6.9e-05 Score=60.22 Aligned_cols=84 Identities=15% Similarity=0.209 Sum_probs=56.4
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MA-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~-----------------------------~~~l~~ 119 (285)
.+++++|.|| +.||++|....|.+.++.++++..++.++. +| ...+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 4578999999 999999999999999998888444444442 22 234666
Q ss_pred hhCCC------CCCeEEEEcc-ccce-eecCC----CchhHHHHHHHhh
Q psy159 120 KWGVT------KLPAVVYFRH-RFPS-IYRGD----LSEEEEVLQWLIT 156 (285)
Q Consensus 120 ~~~i~------~~Ptl~~~~~-g~~~-~y~g~----~~~~~~l~~fi~~ 156 (285)
.|++. ..|+.+++.. |+.. .+.|. +.. +++++.+..
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~-~ell~~l~~ 174 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSV-DETLRLVQA 174 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCH-HHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCH-HHHHHHHHH
Confidence 77874 5888888864 5542 23332 233 366666654
No 442
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.80 E-value=0.00011 Score=56.64 Aligned_cols=40 Identities=8% Similarity=-0.031 Sum_probs=31.7
Q ss_pred CCeEEEEEE-CCCChhhHH-HHHHHHHHHhhcCcCCe-EEEEE
Q psy159 178 TQYLAVYFY-KLNCNICDQ-ILEGLEKVDDECDIYGI-HMVKI 217 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~-~~~~~~~la~~~~~~~i-~~~~i 217 (285)
+++++|.|| +.||+.|.. -.|.++++.++++..++ .+..+
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~I 73 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACM 73 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 467778876 899999999 89999998888864456 66655
No 443
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.78 E-value=0.00016 Score=59.21 Aligned_cols=72 Identities=11% Similarity=0.256 Sum_probs=51.8
Q ss_pred hCCeEEEEEE-CCCChhhH-HHHHHHHHHHhhcCcCCe-EEEEE-------------------------cChHHHHhcCC
Q psy159 177 ETQYLAVYFY-KLNCNICD-QILEGLEKVDDECDIYGI-HMVKI-------------------------QDPQLAKRYSI 228 (285)
Q Consensus 177 ~~~~~~v~F~-a~~c~~c~-~~~~~~~~la~~~~~~~i-~~~~i-------------------------~~~~~~~~~~v 228 (285)
.+++++|.|| +.||++|. ...|.+.++.++++..++ .+..+ ....+++.|++
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 3568899998 99999999 889999999888865457 66666 12346777777
Q ss_pred c-----------ccCeEEEEeCCeEE-EEecC
Q psy159 229 K-----------TFPALVYFRNGNPL-IFEGE 248 (285)
Q Consensus 229 ~-----------~~Ptl~~~~~g~~~-~y~g~ 248 (285)
. ..|+.+++++|+.. .+.|.
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~ 143 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEP 143 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECC
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEec
Confidence 5 34765555889765 44454
No 444
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.77 E-value=8.6e-06 Score=55.85 Aligned_cols=54 Identities=17% Similarity=0.350 Sum_probs=39.3
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc---ChHHHHhc-CCcccCeEEEEeCCeE
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ---DPQLAKRY-SIKTFPALVYFRNGNP 242 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~---~~~~~~~~-~v~~~Ptl~~~~~g~~ 242 (285)
++.|+++||++|+.+.+.+++++..+ ....++ ...+.+.+ ++.++|+++ .+|+.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~~i~~-----~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKKGVKY-----TDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHHTCCE-----EEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCc-----EEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 67789999999999999998874322 222323 34577778 999999984 37764
No 445
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.77 E-value=7.8e-05 Score=49.86 Aligned_cols=67 Identities=7% Similarity=0.116 Sum_probs=46.1
Q ss_pred EEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-C----hhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHH
Q psy159 77 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-D----PRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVL 151 (285)
Q Consensus 77 lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~----~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~ 151 (285)
++.|+++||++|+++.+.+++.. ..+..+.++ + ..+.+.+++.++|++. .+|+.+ |+. ++|.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~-----i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i---~g~---~~i~ 69 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG-----VSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI---GGY---DDLY 69 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT-----CCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE---ESH---HHHH
T ss_pred EEEEECCCChhHHHHHHHHHHCC-----CCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE---eCH---HHHH
Confidence 57899999999999999998762 235556665 2 2356778999999984 366532 221 2577
Q ss_pred HHHhh
Q psy159 152 QWLIT 156 (285)
Q Consensus 152 ~fi~~ 156 (285)
+++.+
T Consensus 70 ~~~~~ 74 (82)
T 1fov_A 70 ALDAR 74 (82)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 76654
No 446
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.75 E-value=3.6e-05 Score=59.50 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=38.1
Q ss_pred cCCcEEEEEe-CCCChhHHH-HHHHHHhHHhhcCCCCc-EEEEe--CC----hhHHhhhCCC-CCC
Q psy159 72 ENEFVTVFFY-ETDHKDSVK-VLERLEKIDGETDNMDI-TFVKM--AD----PRYARKWGVT-KLP 127 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~-~~~~~~~~a~~~~~~~v-~~~~~--~~----~~l~~~~~i~-~~P 127 (285)
.++++++.|| +.||+.|.. -.|.+.++.++++..++ .++.+ |. ...++++++. .+|
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp 95 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQ 95 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceE
Confidence 3566777776 999999999 99999999888854455 55543 33 2344555554 254
No 447
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.75 E-value=4.5e-05 Score=62.84 Aligned_cols=89 Identities=9% Similarity=0.117 Sum_probs=60.0
Q ss_pred HHHHhcCCc-EEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC----------------------------Ch
Q psy159 67 DKLLEENEF-VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK--MA----------------------------DP 115 (285)
Q Consensus 67 ~~~~~~~~~-~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~----------------------------~~ 115 (285)
.+++..++. +|+.|+++||+.|....+.+.++.++++..++.++. +| ..
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 344434453 556789999999999999999999988554555553 33 23
Q ss_pred hHHhhhCCC-------CCCeEEEEcc-ccc-eeecCC----CchhHHHHHHHhh
Q psy159 116 RYARKWGVT-------KLPAVVYFRH-RFP-SIYRGD----LSEEEEVLQWLIT 156 (285)
Q Consensus 116 ~l~~~~~i~-------~~Ptl~~~~~-g~~-~~y~g~----~~~~~~l~~fi~~ 156 (285)
.+++.||+. .+|+++++.+ |+. ..+.|. ++.+ +++..|..
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~-Ellr~I~a 159 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVD-EILRIVKA 159 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHH-HHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhH-HHHHHHHH
Confidence 578889987 8999888864 654 222232 3443 67777654
No 448
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.74 E-value=9.3e-05 Score=60.70 Aligned_cols=84 Identities=14% Similarity=0.200 Sum_probs=57.5
Q ss_pred cCCcEEEEEeC-CCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFVK--MA-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fya-~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~-----------------------------~~~l~~ 119 (285)
.+++++|.||+ .||+.|....|.+.++.++++..++.++. +| ...+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 46788999999 99999999999999999998544555442 22 235677
Q ss_pred hhCCC------CCCeEEEEcc-ccce-eecC----CCchhHHHHHHHhh
Q psy159 120 KWGVT------KLPAVVYFRH-RFPS-IYRG----DLSEEEEVLQWLIT 156 (285)
Q Consensus 120 ~~~i~------~~Ptl~~~~~-g~~~-~y~g----~~~~~~~l~~fi~~ 156 (285)
.||+. ..|+.+++.. |+.. .+.+ .+..+ ++++.+..
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~-eil~~l~~ 203 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVD-ETLRLVQA 203 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHH-HHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHH-HHHHHHHH
Confidence 78887 5798888864 5542 2222 22232 56666654
No 449
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.74 E-value=3.4e-05 Score=60.64 Aligned_cols=39 Identities=5% Similarity=-0.180 Sum_probs=29.2
Q ss_pred CCc-EEEEEeCCCChhHHH-HHHHHHhHHhhcCCCCcE-EEE
Q psy159 73 NEF-VTVFFYETDHKDSVK-VLERLEKIDGETDNMDIT-FVK 111 (285)
Q Consensus 73 ~~~-~lv~Fya~~c~~C~~-~~~~~~~~a~~~~~~~v~-~~~ 111 (285)
+++ +|+.|++.||+.|.. -.|.+.+++++++..++. ++.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~ 97 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAV 97 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEE
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 444 555566999999999 799999999988544554 443
No 450
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.73 E-value=0.00026 Score=54.62 Aligned_cols=90 Identities=11% Similarity=-0.014 Sum_probs=59.3
Q ss_pred CCcEEEEEeCCCCh-hHHHHHHHHHhHHhhcCC--CCcEEEE--eC---C-----------------------------h
Q psy159 73 NEFVTVFFYETDHK-DSVKVLERLEKIDGETDN--MDITFVK--MA---D-----------------------------P 115 (285)
Q Consensus 73 ~~~~lv~Fya~~c~-~C~~~~~~~~~~a~~~~~--~~v~~~~--~~---~-----------------------------~ 115 (285)
+++++|.||++||+ .|....+.+.++.++++. .++.++. +| . .
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 68899999999997 699999999999988842 3455443 22 0 1
Q ss_pred hHHhhhCC---------CCCCeEEEEc-cccce-eecCCCchhHHHHHHHhhhccccc
Q psy159 116 RYARKWGV---------TKLPAVVYFR-HRFPS-IYRGDLSEEEEVLQWLITQKTEDR 162 (285)
Q Consensus 116 ~l~~~~~i---------~~~Ptl~~~~-~g~~~-~y~g~~~~~~~l~~fi~~~~~~~~ 162 (285)
.+++.||+ ...|+++++. +|+.. .|.|.....+++.+.+.+....+.
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~~ 165 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEGH 165 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCSC
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhcccc
Confidence 34444443 3446777775 46653 456654334578888877665443
No 451
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.72 E-value=0.00014 Score=58.78 Aligned_cols=72 Identities=15% Similarity=0.310 Sum_probs=52.6
Q ss_pred hCCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHH
Q psy159 177 ETQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAK 224 (285)
Q Consensus 177 ~~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~ 224 (285)
.+++++|.|| +.||+.|....|.+.++.++|+..++.+..| + ...+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 3578999999 9999999999999999988886434666555 1 123566
Q ss_pred hcCC-----cccCeEEEE-eCCeEE-EEecC
Q psy159 225 RYSI-----KTFPALVYF-RNGNPL-IFEGE 248 (285)
Q Consensus 225 ~~~v-----~~~Ptl~~~-~~g~~~-~y~g~ 248 (285)
.|++ ...|+.+++ ++|+.+ .+.|.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~ 165 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVND 165 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEEC
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecC
Confidence 7777 367998888 477755 44453
No 452
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.70 E-value=0.0002 Score=57.42 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=52.2
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHHh
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 225 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 225 (285)
+++++|.|| +.||++|....|.+.++.++++..++.+..+ + ...+++.
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 578999999 9999999999999999988886434666555 1 1235667
Q ss_pred cCCc------ccCeEEEE-eCCeEE-EEecC
Q psy159 226 YSIK------TFPALVYF-RNGNPL-IFEGE 248 (285)
Q Consensus 226 ~~v~------~~Ptl~~~-~~g~~~-~y~g~ 248 (285)
|++. ..|+.+++ ++|+.+ .+.|.
T Consensus 128 ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~ 158 (211)
T 2pn8_A 128 YGVYLEDSGHTLRGLFIIDDKGILRQITLND 158 (211)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred cCCcccCCCcccceEEEECCCCEEEEEEecC
Confidence 7774 58998888 477755 44453
No 453
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.69 E-value=7.6e-05 Score=49.91 Aligned_cols=55 Identities=16% Similarity=0.288 Sum_probs=39.2
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cC----hHHHHhcCCcccCeEEEEeCCeEE
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD----PQLAKRYSIKTFPALVYFRNGNPL 243 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~----~~~~~~~~v~~~Ptl~~~~~g~~~ 243 (285)
++.|+++||++|+.+.+.+++... .+....+ .+ ..+.+.+++.++|++. .+|+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~i-----~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i 62 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKGV-----SFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI 62 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHTC-----CCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHCCC-----CcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 567899999999999999987632 2344455 22 2355678999999984 478643
No 454
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.69 E-value=0.00015 Score=50.77 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=40.1
Q ss_pred CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-ChhHHh----hh-CCCCCCeEEEEccccc
Q psy159 74 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYAR----KW-GVTKLPAVVYFRHRFP 137 (285)
Q Consensus 74 ~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~~~l~~----~~-~i~~~Ptl~~~~~g~~ 137 (285)
..-++.|+++||++|+++...+++.. ..+..+.++ ++.... .. |..++|++ |.+|+.
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~~-----i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ 77 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRKG-----VEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQH 77 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHHT-----CCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEE
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC-----CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEE
Confidence 44568899999999999999998773 235556666 444433 33 88999987 346643
No 455
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.69 E-value=0.00019 Score=50.49 Aligned_cols=71 Identities=11% Similarity=0.063 Sum_probs=45.8
Q ss_pred CcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeCC------hhHH----hhhCCCCCCeEEEEccccceeecCC
Q psy159 74 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD------PRYA----RKWGVTKLPAVVYFRHRFPSIYRGD 143 (285)
Q Consensus 74 ~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~~------~~l~----~~~~i~~~Ptl~~~~~g~~~~y~g~ 143 (285)
+.-++.|+++||++|+++.+.+++.+-. +..+.++. .++. +..+..++|++++ .+|+ +-|.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~i~-----y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~~---~igg 91 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLGVD-----FDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDEK---AIVG 91 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHTBC-----EEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTTE---EEES
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCC-----cEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCCE---EEEc
Confidence 3456889999999999999999887432 44455541 1232 2358999999876 2222 3345
Q ss_pred CchhHHHHHHH
Q psy159 144 LSEEEEVLQWL 154 (285)
Q Consensus 144 ~~~~~~l~~fi 154 (285)
.+.+ .|.+++
T Consensus 92 ~~~~-~l~~~L 101 (103)
T 3nzn_A 92 FKEK-EIRESL 101 (103)
T ss_dssp CCHH-HHHHHT
T ss_pred CCHH-HHHHHh
Confidence 5554 666654
No 456
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.67 E-value=0.00017 Score=55.17 Aligned_cols=41 Identities=12% Similarity=0.196 Sum_probs=31.5
Q ss_pred hCCeEEEEEE-CCCChhhH-HHHHHHHHHHhhcCcCCeE-EEEE
Q psy159 177 ETQYLAVYFY-KLNCNICD-QILEGLEKVDDECDIYGIH-MVKI 217 (285)
Q Consensus 177 ~~~~~~v~F~-a~~c~~c~-~~~~~~~~la~~~~~~~i~-~~~i 217 (285)
.+++++|.|| +.||+.|. ...|.+.++.++++..++. +..+
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~I 77 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCI 77 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 4578899999 89999999 7889999888877543455 4444
No 457
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.66 E-value=6.3e-05 Score=58.11 Aligned_cols=54 Identities=9% Similarity=0.238 Sum_probs=37.7
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEE--EeCCh----hHHhhhCCCCCC
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFV--KMADP----RYARKWGVTKLP 127 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~--~~~~~----~l~~~~~i~~~P 127 (285)
.+++++|.|| +.||+.|....|.+.++.++++ ++.++ .+|.+ ..++++++..+|
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~ 106 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGME--GVDVTVVSMDLPFAQKRFCESFNIQNVT 106 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTCT--TEEEEEEESSCHHHHHHHHHHTTCCSSE
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHcC--CceEEEEeCCCHHHHHHHHHHcCCCCeE
Confidence 3578889998 8999999999999999988873 44444 34432 244555554444
No 458
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.66 E-value=0.00028 Score=55.32 Aligned_cols=71 Identities=13% Similarity=0.142 Sum_probs=51.1
Q ss_pred CCeEEEEEEC-CCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c--------------------------ChHHHHhcCC
Q psy159 178 TQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI--Q--------------------------DPQLAKRYSI 228 (285)
Q Consensus 178 ~~~~~v~F~a-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~--------------------------~~~~~~~~~v 228 (285)
+++++|.||+ .||+.|....|.+.++.++++..++.+..+ + ...+++.|++
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 5789999995 899999999999999988877545666655 1 1234556666
Q ss_pred c------ccCeEEEEe-CCeEE-EEecC
Q psy159 229 K------TFPALVYFR-NGNPL-IFEGE 248 (285)
Q Consensus 229 ~------~~Ptl~~~~-~g~~~-~y~g~ 248 (285)
. ..|+.+++. +|+.+ .+.|.
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i~~~~~~~ 137 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGIIQAIEVTA 137 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred ccCCCCceeeEEEEECCCCeEEEEEecC
Confidence 5 269888884 78755 45554
No 459
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.65 E-value=0.0002 Score=57.61 Aligned_cols=40 Identities=8% Similarity=0.045 Sum_probs=33.6
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~ 112 (285)
.++++||.|||+||+.|. -.|.++++.++++..++.++.+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgv 94 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGF 94 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEE
Confidence 468999999999999999 7899999999996556666644
No 460
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.65 E-value=6.8e-05 Score=57.46 Aligned_cols=54 Identities=9% Similarity=0.015 Sum_probs=37.2
Q ss_pred cCCcEEEEEeC-CCChhHHHHHHHHHhHHhhcCCCCcEEEE--eCC----hhHHhhhCCCCCC
Q psy159 72 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFVK--MAD----PRYARKWGVTKLP 127 (285)
Q Consensus 72 ~~~~~lv~Fya-~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~~----~~l~~~~~i~~~P 127 (285)
.+++++|.||+ .||++|....|.+.++.+++ .++.++. +|. ...++++++..+|
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~~~~~~~~~~~ 101 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRWCGAEGLDNAI 101 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHHHHHTCTTSE
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHHHHhcCCCCcE
Confidence 45788999995 99999999999999998887 3454443 342 2234455553344
No 461
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.65 E-value=0.00012 Score=50.18 Aligned_cols=55 Identities=9% Similarity=0.210 Sum_probs=39.7
Q ss_pred EEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-Ch----hHHhhhCCCCCCeEEEEccccc
Q psy159 76 VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DP----RYARKWGVTKLPAVVYFRHRFP 137 (285)
Q Consensus 76 ~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~~----~l~~~~~i~~~Ptl~~~~~g~~ 137 (285)
-++.|+++||++|+++.+.+++.. ..+..+.++ ++ .+.+.+++.++|++ +.+|+.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~~-----i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARKG-----AEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT-----CCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHcC-----CCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 367899999999999999888752 335566665 33 35557899999976 346643
No 462
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.64 E-value=0.00014 Score=50.85 Aligned_cols=58 Identities=17% Similarity=0.272 Sum_probs=40.2
Q ss_pred CeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cChHHH----Hhc-CCcccCeEEEEeCCeEE
Q psy159 179 QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQLA----KRY-SIKTFPALVYFRNGNPL 243 (285)
Q Consensus 179 ~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~~----~~~-~v~~~Ptl~~~~~g~~~ 243 (285)
..-++.|.++||++|+++.+.++++... .....+ .++... +.. +..++|++ |.+|+.+
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~~i~-----y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~i 78 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRKGVE-----FQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHI 78 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHHTCC-----CEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEE
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCC-----CEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEE
Confidence 3456778999999999999999987533 334455 344433 333 88999987 4578643
No 463
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.64 E-value=4.2e-05 Score=58.68 Aligned_cols=37 Identities=16% Similarity=0.104 Sum_probs=30.0
Q ss_pred cCCcEEEEEe-CCCChhHH-HHHHHHHhHHhhcCCCCcE
Q psy159 72 ENEFVTVFFY-ETDHKDSV-KVLERLEKIDGETDNMDIT 108 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~-~~~~~~~~~a~~~~~~~v~ 108 (285)
.+++++|.|| +.||+.|. .-.|.+.++.++++..++.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~ 72 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVT 72 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 4578889998 89999999 8999999998888433444
No 464
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.63 E-value=0.00027 Score=54.70 Aligned_cols=30 Identities=13% Similarity=0.094 Sum_probs=26.1
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhc
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGET 102 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~ 102 (285)
.+..++.|++.||++|+.+.+.+.++.+.+
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHH
Confidence 456789999999999999999998877766
No 465
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.59 E-value=0.00028 Score=55.34 Aligned_cols=66 Identities=11% Similarity=0.102 Sum_probs=45.4
Q ss_pred CCeE-EEEEECCCChhhHH-HHHHHHHHHhhcCcCCeE-EEEE-----------------c---------ChHHHHhcCC
Q psy159 178 TQYL-AVYFYKLNCNICDQ-ILEGLEKVDDECDIYGIH-MVKI-----------------Q---------DPQLAKRYSI 228 (285)
Q Consensus 178 ~~~~-~v~F~a~~c~~c~~-~~~~~~~la~~~~~~~i~-~~~i-----------------~---------~~~~~~~~~v 228 (285)
++.+ ++.|++.||+.|.. -.|.++++.++|+..++. +.-+ . ...+++.|++
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv 135 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGM 135 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCC
Confidence 3444 44556999999999 799999999988754455 5555 1 2346677777
Q ss_pred c-----------ccCeEEEEeCCeEE
Q psy159 229 K-----------TFPALVYFRNGNPL 243 (285)
Q Consensus 229 ~-----------~~Ptl~~~~~g~~~ 243 (285)
. ..|+.+++++|+..
T Consensus 136 ~~~~~~~g~g~~~~r~tfiIddG~I~ 161 (184)
T 3uma_A 136 EIDLSAGTLGIRSKRYSMLVEDGVVK 161 (184)
T ss_dssp EEEEGGGTCEEEECCEEEEEETTEEE
T ss_pred ceeccccCCcccceeEEEEECCCEEE
Confidence 4 24666666888754
No 466
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.58 E-value=0.00013 Score=53.72 Aligned_cols=70 Identities=9% Similarity=0.067 Sum_probs=48.4
Q ss_pred ChhHHHHHHhcCCcEEEEEeCCCChhHHHH-HHHHHhHHhhcCCCCcEEEEeC-C-------hhHHhhhCCCCCCeEEEE
Q psy159 62 NRRMLDKLLEENEFVTVFFYETDHKDSVKV-LERLEKIDGETDNMDITFVKMA-D-------PRYARKWGVTKLPAVVYF 132 (285)
Q Consensus 62 ~~~~f~~~~~~~~~~lv~Fya~~c~~C~~~-~~~~~~~a~~~~~~~v~~~~~~-~-------~~l~~~~~i~~~Ptl~~~ 132 (285)
..+.++.++.+.+ ++.|+.+||++|+++ .+.+++++.. ...+.++.++ + ..+.+.+|...+|++ |
T Consensus 26 ~~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~--~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--f 99 (129)
T 3ctg_A 26 TVAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP--KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--Y 99 (129)
T ss_dssp HHHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC--GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--E
T ss_pred HHHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc--CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--E
Confidence 3456667776654 678999999999999 8888766421 1235566665 2 357778999999996 4
Q ss_pred ccccc
Q psy159 133 RHRFP 137 (285)
Q Consensus 133 ~~g~~ 137 (285)
.+|+.
T Consensus 100 i~g~~ 104 (129)
T 3ctg_A 100 INGKH 104 (129)
T ss_dssp ETTEE
T ss_pred ECCEE
Confidence 46643
No 467
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.57 E-value=0.00019 Score=49.22 Aligned_cols=55 Identities=16% Similarity=0.407 Sum_probs=38.8
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cCh----HHHHhcCCcccCeEEEEeCCeEE
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDP----QLAKRYSIKTFPALVYFRNGNPL 243 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~----~~~~~~~v~~~Ptl~~~~~g~~~ 243 (285)
++.|+++||++|+++.+.+++... .+....+ .++ .+.+.+++.++|++ +.+|+.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~~i-----~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i 67 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARKGA-----EFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHV 67 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTC-----CCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcCC-----CcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 678899999999999998887632 2344455 333 34457899999975 4577643
No 468
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.57 E-value=0.00025 Score=50.93 Aligned_cols=67 Identities=22% Similarity=0.331 Sum_probs=45.7
Q ss_pred HHHHHHHHHhCCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc---C-----hHHHHhcCCcccCeEEEEeC
Q psy159 168 RVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ---D-----PQLAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 168 ~~~~~~~~~~~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~---~-----~~~~~~~~v~~~Ptl~~~~~ 239 (285)
.+.+++.+++++ ++.|..+||++|+++.+.+.++... .....++ + ..+.+..+..++|++.+ +
T Consensus 7 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~~i~-----~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~ 77 (114)
T 3h8q_A 7 RRHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSLGVE-----CNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--N 77 (114)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHTTCC-----CEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHcCCC-----cEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--C
Confidence 345666776655 3458999999999999999887433 3344442 2 22556678899999865 7
Q ss_pred CeEE
Q psy159 240 GNPL 243 (285)
Q Consensus 240 g~~~ 243 (285)
|+.+
T Consensus 78 g~~i 81 (114)
T 3h8q_A 78 KVHV 81 (114)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 7643
No 469
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.55 E-value=0.00012 Score=50.24 Aligned_cols=53 Identities=15% Similarity=0.266 Sum_probs=40.1
Q ss_pred EEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc------C----hHHHHhcCCcccCeEEEEeCCe
Q psy159 182 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ------D----PQLAKRYSIKTFPALVYFRNGN 241 (285)
Q Consensus 182 ~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~------~----~~~~~~~~v~~~Ptl~~~~~g~ 241 (285)
++.|+++||++|+++.+.++++...| ....++ . +.+.+.+++.++|++++ +|+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~~-----~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~ 76 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVDF-----EVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK 76 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCCC-----EEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCc-----EEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE
Confidence 56789999999999999999885433 344442 1 55667889999999887 775
No 470
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.54 E-value=0.00049 Score=56.35 Aligned_cols=66 Identities=20% Similarity=0.324 Sum_probs=51.6
Q ss_pred CCeEEEEEEC-CCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c-----------------------------ChHHHHh
Q psy159 178 TQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 225 (285)
Q Consensus 178 ~~~~~v~F~a-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 225 (285)
++.++|.||+ .||+.|....+.+.++.++|+..++.+..+ + ...+++.
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 156 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKD 156 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHH
Confidence 5789999999 999999999999999999987545666666 1 1246677
Q ss_pred cCCc------ccCeEEEE-eCCeEE
Q psy159 226 YSIK------TFPALVYF-RNGNPL 243 (285)
Q Consensus 226 ~~v~------~~Ptl~~~-~~g~~~ 243 (285)
|++. ..|+.+++ ++|+.+
T Consensus 157 ygv~~~~~g~~~p~~flID~~G~I~ 181 (240)
T 3qpm_A 157 YGVYLEDQGHTLRGLFIIDEKGVLR 181 (240)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEE
T ss_pred hCCccccCCCccceEEEEcCCCeEE
Confidence 8876 57988888 577754
No 471
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.54 E-value=0.00037 Score=50.06 Aligned_cols=65 Identities=18% Similarity=0.322 Sum_probs=45.7
Q ss_pred hhHHHHHHhcCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---C-----hhHHhhhCCCCCCeEEEEcc
Q psy159 63 RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---D-----PRYARKWGVTKLPAVVYFRH 134 (285)
Q Consensus 63 ~~~f~~~~~~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~-----~~l~~~~~i~~~Ptl~~~~~ 134 (285)
.+.+++++.+++ ++.|+++||++|+++.+.+.+.. .....+.++ + ..+.+..|...+|++.+ +
T Consensus 7 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~~-----i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~ 77 (114)
T 3h8q_A 7 RRHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSLG-----VECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--N 77 (114)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHTT-----CCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHcC-----CCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--C
Confidence 455677776654 45699999999999999998763 234556665 2 23556788999999855 6
Q ss_pred cc
Q psy159 135 RF 136 (285)
Q Consensus 135 g~ 136 (285)
|+
T Consensus 78 g~ 79 (114)
T 3h8q_A 78 KV 79 (114)
T ss_dssp TE
T ss_pred CE
Confidence 64
No 472
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.54 E-value=0.00021 Score=52.66 Aligned_cols=70 Identities=13% Similarity=0.240 Sum_probs=48.1
Q ss_pred HHHHHHHHHhCCeEEEEEECCCChhhHHH-HHHHHHHHhhcCcCCeEEEEE-cC-------hHHHHhcCCcccCeEEEEe
Q psy159 168 RVMLETMVEETQYLAVYFYKLNCNICDQI-LEGLEKVDDECDIYGIHMVKI-QD-------PQLAKRYSIKTFPALVYFR 238 (285)
Q Consensus 168 ~~~~~~~~~~~~~~~v~F~a~~c~~c~~~-~~~~~~la~~~~~~~i~~~~i-~~-------~~~~~~~~v~~~Ptl~~~~ 238 (285)
.+.+++.+...+ ++.|+.+||++|+++ .+.+.+++... ..+.+..+ .. ..+.+.++..++|++ |.
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~~--i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi 100 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVPK--SKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YI 100 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCCG--GGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCccC--CCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EE
Confidence 445666666654 567899999999999 88888775221 13455565 22 357778899999996 55
Q ss_pred CCeEE
Q psy159 239 NGNPL 243 (285)
Q Consensus 239 ~g~~~ 243 (285)
+|+.+
T Consensus 101 ~g~~i 105 (129)
T 3ctg_A 101 NGKHI 105 (129)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 78644
No 473
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.53 E-value=0.00012 Score=57.75 Aligned_cols=31 Identities=10% Similarity=-0.028 Sum_probs=27.3
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhcC
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGETD 103 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~ 103 (285)
++..++.|+++||++|..+.|.+.++.+.+.
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 52 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKALP 52 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHSC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHCC
Confidence 4678899999999999999999999887763
No 474
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.51 E-value=0.00012 Score=57.76 Aligned_cols=41 Identities=7% Similarity=0.160 Sum_probs=33.8
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA 113 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~ 113 (285)
.+++++|.|+++||++|+++.|.++++.+.+.+ ++.+..++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~ 64 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVP 64 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEE
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEe
Confidence 357789999999999999999999999988854 46665543
No 475
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.50 E-value=7.3e-05 Score=57.01 Aligned_cols=40 Identities=10% Similarity=0.213 Sum_probs=27.8
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
+++++|.|| +.||++|....|.+.++..+++..++.+..+
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~v 70 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGI 70 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEE
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccccCceEeee
Confidence 577889998 8999999999999999988887656666665
No 476
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.50 E-value=7.7e-05 Score=57.98 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=36.3
Q ss_pred CCcEEEE-EeCCCChhHHH-HHHHHHhHHhhcCCCCcEE---EEeCC----hhHHhhhCCC-CCC
Q psy159 73 NEFVTVF-FYETDHKDSVK-VLERLEKIDGETDNMDITF---VKMAD----PRYARKWGVT-KLP 127 (285)
Q Consensus 73 ~~~~lv~-Fya~~c~~C~~-~~~~~~~~a~~~~~~~v~~---~~~~~----~~l~~~~~i~-~~P 127 (285)
++++++. |++.||+.|.. -.|.+.+++++++..++.+ +..|. ...+++.++. .+|
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp 107 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVR 107 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCE
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceE
Confidence 4555554 45999999994 8999999999885545443 34453 3445556665 355
No 477
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.50 E-value=8.2e-05 Score=57.65 Aligned_cols=42 Identities=7% Similarity=0.185 Sum_probs=31.8
Q ss_pred HhCCeEEEEEECCCChhhHHH-HHHHHHHHhhcCcCCeE-EEEE
Q psy159 176 EETQYLAVYFYKLNCNICDQI-LEGLEKVDDECDIYGIH-MVKI 217 (285)
Q Consensus 176 ~~~~~~~v~F~a~~c~~c~~~-~~~~~~la~~~~~~~i~-~~~i 217 (285)
..++.+++.|++.||++|... .|.+.++..+++..++. +.-+
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~I 85 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICV 85 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEE
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 333466778899999999998 99999998888643455 5555
No 478
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.50 E-value=0.00015 Score=55.61 Aligned_cols=30 Identities=3% Similarity=-0.063 Sum_probs=25.9
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGE 101 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~ 101 (285)
.+++++|.|| +.||++|....|.+.++.++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~ 75 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK 75 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc
Confidence 4578888888 78999999999999998776
No 479
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.49 E-value=3.2e-05 Score=59.57 Aligned_cols=73 Identities=12% Similarity=0.209 Sum_probs=51.9
Q ss_pred HHHHHHhCCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE------------------------cChHHHHh
Q psy159 171 LETMVEETQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI------------------------QDPQLAKR 225 (285)
Q Consensus 171 ~~~~~~~~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------------------~~~~~~~~ 225 (285)
+.++...+++++|.|| +.||++|....+.+.++..+++..++.+..+ .+..+++.
T Consensus 26 Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 105 (164)
T 4gqc_A 26 LYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKL 105 (164)
T ss_dssp HHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHH
T ss_pred HHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHH
Confidence 3445556788888888 9999999988888888888887655666666 12346677
Q ss_pred cCCc----------ccCeEEEE-eCCeEE
Q psy159 226 YSIK----------TFPALVYF-RNGNPL 243 (285)
Q Consensus 226 ~~v~----------~~Ptl~~~-~~g~~~ 243 (285)
|||. ..|+..++ ++|+..
T Consensus 106 ygv~~~~~~~~~~~~~p~tflID~~G~I~ 134 (164)
T 4gqc_A 106 YNVYHEDLKGLKMVAKRAVFIVKPDGTVA 134 (164)
T ss_dssp TTCEEEEETTEEEEECCEEEEECTTSBEE
T ss_pred cCCcccccccCcCCeeeEEEEECCCCEEE
Confidence 7763 25777777 567643
No 480
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.48 E-value=0.00019 Score=59.29 Aligned_cols=66 Identities=12% Similarity=0.193 Sum_probs=48.3
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEEE--eC-----------------------------ChhHHh
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MA-----------------------------DPRYAR 119 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~~--~~-----------------------------~~~l~~ 119 (285)
.++.++|.|| +.||+.|....|.+.++.++++..++.++. +| ...+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 4578888898 999999999999999999888544555442 22 235677
Q ss_pred hhCCC------CCCeEEEEcc-ccc
Q psy159 120 KWGVT------KLPAVVYFRH-RFP 137 (285)
Q Consensus 120 ~~~i~------~~Ptl~~~~~-g~~ 137 (285)
.||+. .+|+.+++.. |+.
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I 194 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGIL 194 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBE
T ss_pred HcCCccccCCCccceEEEECCCCeE
Confidence 78875 4788888864 544
No 481
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.48 E-value=0.00059 Score=52.24 Aligned_cols=68 Identities=9% Similarity=0.196 Sum_probs=49.1
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE------------------------c--ChHHHHhcCCcc
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI------------------------Q--DPQLAKRYSIKT 230 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------------------~--~~~~~~~~~v~~ 230 (285)
+++++|.|| +.||++|....|.+.++.++++ ++.+..+ + ...+++.|++..
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 120 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKLS--NTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDI 120 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHST--TEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCcee
Confidence 578899998 7999999999999999988873 4555444 1 345677777753
Q ss_pred ---------cCeEEEE-eCCeEE-EEec
Q psy159 231 ---------FPALVYF-RNGNPL-IFEG 247 (285)
Q Consensus 231 ---------~Ptl~~~-~~g~~~-~y~g 247 (285)
.|+.+++ ++|+.+ .+.|
T Consensus 121 ~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 121 QTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred cccccCCccceeEEEEcCCCEEEEEEeC
Confidence 4888888 477755 4443
No 482
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.47 E-value=5.4e-05 Score=58.18 Aligned_cols=37 Identities=3% Similarity=0.112 Sum_probs=29.9
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEE
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFV 110 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~ 110 (285)
.+++++|.|| +.||+.|....|.+.++.++++ ++.++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~--~v~vv 79 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLS--NTIVL 79 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHST--TEEEE
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHcC--CCEEE
Confidence 4578889998 8999999999999999988873 34444
No 483
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.46 E-value=0.00015 Score=57.25 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=33.2
Q ss_pred CCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC
Q psy159 73 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA 113 (285)
Q Consensus 73 ~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~ 113 (285)
++..+|.|+++||+||+++.|.+.++.+.+.+ ++.+..+.
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p 63 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEH 63 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEE
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEec
Confidence 46789999999999999999999999988854 46665543
No 484
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.44 E-value=0.00014 Score=49.41 Aligned_cols=56 Identities=11% Similarity=0.149 Sum_probs=40.2
Q ss_pred EEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE---cC----hHHHHhcCC-----cccCeEEEEeCCeEE
Q psy159 181 LAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QD----PQLAKRYSI-----KTFPALVYFRNGNPL 243 (285)
Q Consensus 181 ~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~----~~~~~~~~v-----~~~Ptl~~~~~g~~~ 243 (285)
.++.|+++||++|+++...++++... ..+..+ .. .++.+.++. .++|++.+ +|+.+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i~-----~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i 72 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNIA-----FDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI 72 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCC-----CEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCCC-----ceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE
Confidence 46778999999999999988877533 344444 11 346777787 89999855 77643
No 485
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.43 E-value=0.0006 Score=53.54 Aligned_cols=80 Identities=15% Similarity=0.130 Sum_probs=0.0
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhc-CCCCcEEEEe--------------------------------------
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGET-DNMDITFVKM-------------------------------------- 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~-~~~~v~~~~~-------------------------------------- 112 (285)
+++..++.|+++||++|..+.+.+.++.+.+ .+..+...-+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~s~~a~~a~~~a~~~~~~~~~~~~lf~~~~~~~~ 103 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEKGS 103 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEECCCSTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCcccCCCcHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhcc
Q ss_pred -----------------------------------C----ChhHHhhhCCCCCCeEEEEccccceeecCCCchhHHHHHH
Q psy159 113 -----------------------------------A----DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQW 153 (285)
Q Consensus 113 -----------------------------------~----~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~l~~f 153 (285)
. +..+++++||.+.||+++ +|+.. ..|. +.+ .+.+.
T Consensus 104 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~vi--ng~~~-~~g~-~~~-~l~~~ 178 (193)
T 2rem_A 104 VPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVGTPTIVV--NGRYM-VTGH-DFE-DTLRI 178 (193)
T ss_dssp SCSTTCCHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHCCSSSSEEEE--TTTEE-ECCS-SHH-HHHHH
T ss_pred cCcCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEE-ecCC-CHH-HHHHH
Q ss_pred Hhh
Q psy159 154 LIT 156 (285)
Q Consensus 154 i~~ 156 (285)
|..
T Consensus 179 i~~ 181 (193)
T 2rem_A 179 TDY 181 (193)
T ss_dssp HHH
T ss_pred HHH
No 486
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.41 E-value=0.00039 Score=47.11 Aligned_cols=68 Identities=9% Similarity=0.042 Sum_probs=45.8
Q ss_pred EEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEeC---C----hhHHhhhCC-----CCCCeEEEEccccceeecCC
Q psy159 76 VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---D----PRYARKWGV-----TKLPAVVYFRHRFPSIYRGD 143 (285)
Q Consensus 76 ~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~---~----~~l~~~~~i-----~~~Ptl~~~~~g~~~~y~g~ 143 (285)
.++.|+++||++|+++...+.+.. ..+.+..+| + .++.+..|. .++|++.+ +|+.+ |+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~-----i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i---~g 74 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN-----IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI---GG 74 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT-----CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE---ES
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC-----CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE---eC
Confidence 367899999999999998887653 235566565 1 346777788 89999854 66432 22
Q ss_pred CchhHHHHHHHhh
Q psy159 144 LSEEEEVLQWLIT 156 (285)
Q Consensus 144 ~~~~~~l~~fi~~ 156 (285)
. +++.+++.+
T Consensus 75 ~---~~i~~~~~~ 84 (89)
T 3msz_A 75 F---TELKANADK 84 (89)
T ss_dssp H---HHHHHTHHH
T ss_pred h---HHHHHHHHH
Confidence 2 256666554
No 487
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.41 E-value=0.0005 Score=51.80 Aligned_cols=65 Identities=18% Similarity=0.462 Sum_probs=47.8
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE----------------------------------------
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---------------------------------------- 217 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---------------------------------------- 217 (285)
.+..++.|..++|++|+++.+.++++ . ++++...
T Consensus 14 a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 14 GKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 56788999999999999999987654 2 2333222
Q ss_pred ---------cChHHHHhcCCcccCeEEEEeCCeEEEEecCCcc
Q psy159 218 ---------QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENKI 251 (285)
Q Consensus 218 ---------~~~~~~~~~~v~~~Ptl~~~~~g~~~~y~g~~~~ 251 (285)
.+..+++++||+++||+++ .+|+ ...|....
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~--~i~G~~~~ 127 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR--TQSGYSPM 127 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC--EEESCCCT
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE--EeeCCCCH
Confidence 1345678899999999998 7787 46787653
No 488
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.38 E-value=0.00059 Score=56.14 Aligned_cols=71 Identities=10% Similarity=0.212 Sum_probs=52.6
Q ss_pred HHHHhCCe-EEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE--c----------------------------ChH
Q psy159 173 TMVEETQY-LAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q----------------------------DPQ 221 (285)
Q Consensus 173 ~~~~~~~~-~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~----------------------------~~~ 221 (285)
+++..++. +++.|+++||+.|....+.+.++..+|+..++.+..+ + ...
T Consensus 28 d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ 107 (249)
T 3a2v_A 28 HYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGT 107 (249)
T ss_dssp HHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSH
T ss_pred HHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchH
Confidence 33423454 5556789999999999999999999987545777666 1 234
Q ss_pred HHHhcCCc-------ccCeEEEE-eCCeEE
Q psy159 222 LAKRYSIK-------TFPALVYF-RNGNPL 243 (285)
Q Consensus 222 ~~~~~~v~-------~~Ptl~~~-~~g~~~ 243 (285)
+++.|++. .+|+++++ ++|+..
T Consensus 108 ia~~ygv~~~~~g~~~~p~~fIID~dG~I~ 137 (249)
T 3a2v_A 108 VARRLGLLHAESATHTVRGVFIVDARGVIR 137 (249)
T ss_dssp HHHHHTCCCTTCSSSCCEEEEEECTTSBEE
T ss_pred HHHHhCCccccCCCcccceEEEECCCCeEE
Confidence 77888987 89988888 577755
No 489
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.34 E-value=0.00014 Score=58.24 Aligned_cols=40 Identities=8% Similarity=0.085 Sum_probs=32.9
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEEEe
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 112 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~ 112 (285)
.++.+||.|||+||+.| ...|.+.++.++++..++.++.+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgv 76 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGF 76 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEE
Confidence 46899999999999999 67899999999886555666554
No 490
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.33 E-value=0.0014 Score=50.83 Aligned_cols=31 Identities=6% Similarity=0.015 Sum_probs=27.3
Q ss_pred cCCcEEEEEeCCCChhHHHHHHHHHhHHhhc
Q psy159 72 ENEFVTVFFYETDHKDSVKVLERLEKIDGET 102 (285)
Q Consensus 72 ~~~~~lv~Fya~~c~~C~~~~~~~~~~a~~~ 102 (285)
++++.+|.|++-.|+||+++.+.+.++.+.+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~ 50 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQL 50 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhc
Confidence 3467899999999999999999998887776
No 491
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.32 E-value=0.00049 Score=48.95 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=43.3
Q ss_pred hHHHHHHhcCCcEEEEEeC-----CCChhHHHHHHHHHhHHhhcCCCCcEEEEeC-Ch----hHHhhhCCCCCCeEEEEc
Q psy159 64 RMLDKLLEENEFVTVFFYE-----TDHKDSVKVLERLEKIDGETDNMDITFVKMA-DP----RYARKWGVTKLPAVVYFR 133 (285)
Q Consensus 64 ~~f~~~~~~~~~~lv~Fya-----~~c~~C~~~~~~~~~~a~~~~~~~v~~~~~~-~~----~l~~~~~i~~~Ptl~~~~ 133 (285)
+.+++++.+++ ++.|+. +||++|+++...+.+. +..+..+.++ ++ .+.+..|...+|++ |.
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~-----~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i--fi 76 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST-----GVEYETFDILEDEEVRQGLKTFSNWPTYPQL--YV 76 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT-----CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--EC
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc-----CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--EE
Confidence 44667776554 456777 9999999999988765 2234455555 33 34556788899985 45
Q ss_pred cccc
Q psy159 134 HRFP 137 (285)
Q Consensus 134 ~g~~ 137 (285)
+|+.
T Consensus 77 ~g~~ 80 (109)
T 1wik_A 77 RGDL 80 (109)
T ss_dssp SSSE
T ss_pred CCEE
Confidence 6653
No 492
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.32 E-value=0.00038 Score=54.87 Aligned_cols=39 Identities=13% Similarity=0.284 Sum_probs=34.9
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.+++++.|+++||++|+.+.|.++++.+++.+ ++.|..+
T Consensus 25 ~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (195)
T 3hd5_A 25 GKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQV 63 (195)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEE
T ss_pred CCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEE
Confidence 57789999999999999999999999999886 6777776
No 493
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.32 E-value=0.00041 Score=53.43 Aligned_cols=38 Identities=8% Similarity=0.276 Sum_probs=31.6
Q ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 178 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 178 ~~~~~v~F~-a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
+++++|.|| +.||++|....+.+.++.++++ ++.+..+
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~--~v~vv~I 85 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGME--GVDVTVV 85 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTCT--TEEEEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHcC--CceEEEE
Confidence 568899998 7999999999999999988872 5666655
No 494
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.32 E-value=0.00036 Score=53.29 Aligned_cols=69 Identities=9% Similarity=0.174 Sum_probs=49.3
Q ss_pred CCeEEEEEEC-CCChhhHHHHHHHHHHHhhcCcCCeEEEEE------------------------c--ChHHHHhcCCc-
Q psy159 178 TQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI------------------------Q--DPQLAKRYSIK- 229 (285)
Q Consensus 178 ~~~~~v~F~a-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------------------~--~~~~~~~~~v~- 229 (285)
+++++|.||+ .||++|....|.+.++.++++ ++.+..+ + ...+++.|++.
T Consensus 42 gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 119 (163)
T 1psq_A 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGLD--NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLI 119 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTCT--TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBC
T ss_pred CCEEEEEEECCCCCCccHHHHHHHHHHHHHcC--CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCcc
Confidence 5789999995 899999999999999988873 4555555 1 13456666665
Q ss_pred ---cc--CeEEEE-eCCeEE-EEecC
Q psy159 230 ---TF--PALVYF-RNGNPL-IFEGE 248 (285)
Q Consensus 230 ---~~--Ptl~~~-~~g~~~-~y~g~ 248 (285)
++ |+.+++ ++|+.+ .+.|.
T Consensus 120 ~~~g~~~p~~~liD~~G~i~~~~~g~ 145 (163)
T 1psq_A 120 NEWHLLARAVFVLDTDNTIRYVEYVD 145 (163)
T ss_dssp TTTCSBCCEEEEECTTCBEEEEEECS
T ss_pred ccCCceEEEEEEEcCCCeEEEEEecC
Confidence 33 888888 467755 45553
No 495
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.31 E-value=0.0015 Score=52.83 Aligned_cols=36 Identities=11% Similarity=0.026 Sum_probs=28.3
Q ss_pred cEEEEEeCCCChhHHHHHHHHHhHHhhcCCCCcEEE
Q psy159 75 FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFV 110 (285)
Q Consensus 75 ~~lv~Fya~~c~~C~~~~~~~~~~a~~~~~~~v~~~ 110 (285)
.+|+.|++.||+.|....+.+.++.++++..++.++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi 69 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLI 69 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEE
Confidence 455666899999999999999999988854455444
No 496
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.29 E-value=0.0027 Score=48.78 Aligned_cols=40 Identities=15% Similarity=0.198 Sum_probs=32.5
Q ss_pred CCeEEEEEECCCCh-hhHHHHHHHHHHHhhcCc--CCeEEEEE
Q psy159 178 TQYLAVYFYKLNCN-ICDQILEGLEKVDDECDI--YGIHMVKI 217 (285)
Q Consensus 178 ~~~~~v~F~a~~c~-~c~~~~~~~~~la~~~~~--~~i~~~~i 217 (285)
+++++|.||+.||+ .|....+.++++.+++.. .++.+..+
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~i 70 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITF 70 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEE
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEE
Confidence 67899999999997 699999999999988852 24666555
No 497
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.26 E-value=0.00014 Score=57.88 Aligned_cols=37 Identities=8% Similarity=0.247 Sum_probs=30.3
Q ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHhHHhhcCCCCcEEE
Q psy159 72 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFV 110 (285)
Q Consensus 72 ~~~~~lv~Fy-a~~c~~C~~~~~~~~~~a~~~~~~~v~~~ 110 (285)
.+++++|.|| +.||+.|....|.+.++.++++ ++.++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~--~v~vv 114 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGELE--NTVVL 114 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTST--TEEEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHhC--CCEEE
Confidence 4678889998 6799999999999999998883 34444
No 498
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.24 E-value=0.00047 Score=48.45 Aligned_cols=52 Identities=12% Similarity=0.231 Sum_probs=36.4
Q ss_pred eEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEEc--C----hHHH----HhcCCcccCeEEE
Q psy159 180 YLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ--D----PQLA----KRYSIKTFPALVY 236 (285)
Q Consensus 180 ~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~--~----~~~~----~~~~v~~~Ptl~~ 236 (285)
..++.|+++||++|+++.+.+++++..| ....++ . +.+. +..++.++|++++
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~~i~y-----~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i 83 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDLGVDF-----DYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII 83 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHHTBCE-----EEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCCc-----EEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE
Confidence 3467799999999999999999885443 334442 1 1222 3358899999876
No 499
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.23 E-value=0.00051 Score=54.23 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=34.5
Q ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHhhcCcCCeEEEEE
Q psy159 178 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 217 (285)
Q Consensus 178 ~~~~~v~F~a~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 217 (285)
.++.++.|++.||+||+.+.|.+.++.+++.+ ++.|..+
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~ 62 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTE 62 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEE
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEe
Confidence 46789999999999999999999999999886 6777766
No 500
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.20 E-value=0.00085 Score=47.67 Aligned_cols=65 Identities=25% Similarity=0.433 Sum_probs=42.2
Q ss_pred HHHHHHHhCCeEEEEEEC-----CCChhhHHHHHHHHHHHhhcCcCCeEEEEE-cChH----HHHhcCCcccCeEEEEeC
Q psy159 170 MLETMVEETQYLAVYFYK-----LNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQ----LAKRYSIKTFPALVYFRN 239 (285)
Q Consensus 170 ~~~~~~~~~~~~~v~F~a-----~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~----~~~~~~v~~~Ptl~~~~~ 239 (285)
.+++++++++ + +.|.. +||++|+++.+.++++.. ......+ .++. +.+..+..++|++ |.+
T Consensus 7 ~~~~~i~~~~-v-vvy~~g~~~~~~Cp~C~~ak~~L~~~~i-----~~~~vdi~~~~~~~~~l~~~~g~~~vP~i--fi~ 77 (109)
T 1wik_A 7 GLKVLTNKAS-V-MLFMKGNKQEAKCGFSKQILEILNSTGV-----EYETFDILEDEEVRQGLKTFSNWPTYPQL--YVR 77 (109)
T ss_dssp CHHHHHTTSS-E-EEEESSTTTCCCSSTHHHHHHHHHHTCS-----CEEEEESSSCHHHHHHHHHHHSCCSSCEE--ECS
T ss_pred HHHHHhccCC-E-EEEEecCCCCCCCchHHHHHHHHHHcCC-----CeEEEECCCCHHHHHHHHHHhCCCCCCEE--EEC
Confidence 3556666554 3 45666 999999999999987632 2334444 3333 4555678899975 567
Q ss_pred CeEE
Q psy159 240 GNPL 243 (285)
Q Consensus 240 g~~~ 243 (285)
|+.+
T Consensus 78 g~~i 81 (109)
T 1wik_A 78 GDLV 81 (109)
T ss_dssp SSEE
T ss_pred CEEE
Confidence 8643
Done!