BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15905
(60 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157125066|ref|XP_001660604.1| signal recognition particle 68 kda protein [Aedes aegypti]
gi|108873787|gb|EAT38012.1| AAEL010060-PA [Aedes aegypti]
Length = 609
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/58 (68%), Positives = 47/58 (81%), Gaps = 6/58 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGA 58
MQPIPAKPLFFDLA N +EFPSLEDK++ K GG+ Q AG+SGFVKGL+GWGG+
Sbjct: 555 MQPIPAKPLFFDLALNFVEFPSLEDKVEQK------GGAKQAAGMSGFVKGLFGWGGS 606
>gi|332375308|gb|AEE62795.1| unknown [Dendroctonus ponderosae]
Length = 566
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 40/56 (71%), Gaps = 6/56 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
M+P+PAKPLFFDLA N + FP L +KL+ K K G AGISGFVKGLWGWG
Sbjct: 515 MEPVPAKPLFFDLANNLVAFPDLTEKLEGKTKGKQG------AGISGFVKGLWGWG 564
>gi|156548218|ref|XP_001607102.1| PREDICTED: signal recognition particle 68 kDa protein-like [Nasonia
vitripennis]
Length = 567
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGG 57
MQ IP KPLFFDLA N +EFP L DKL K K G+ GI+G VKGLWGWGG
Sbjct: 516 MQSIPCKPLFFDLAFNMIEFPDLSDKLQEKDK------KGEKGGIAGLVKGLWGWGG 566
>gi|66523933|ref|XP_625154.1| PREDICTED: signal recognition particle 68 kDa protein [Apis
mellifera]
Length = 576
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
MQPIP KPLFFDLA N +EFP L +KL + K G AG++GFVKGLWGWG
Sbjct: 525 MQPIPCKPLFFDLAFNMVEFPDLSEKLGDQAK------KGGQAGLTGFVKGLWGWG 574
>gi|380021068|ref|XP_003694396.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 68 kDa
protein-like [Apis florea]
Length = 576
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
MQPIP KPLFFDLA N +EFP L +KL + K G AG++GFVKGLWGWG
Sbjct: 525 MQPIPCKPLFFDLAFNMVEFPDLSEKLGDQAK------KGGQAGLTGFVKGLWGWG 574
>gi|383865641|ref|XP_003708281.1| PREDICTED: signal recognition particle 68 kDa protein-like
[Megachile rotundata]
Length = 577
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 6/56 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
MQPIP KPLFFDLA N +EFP L +KL + K +GQ AG++GFVKGLWGWG
Sbjct: 526 MQPIPCKPLFFDLAFNMVEFPDLSEKLGDQAKK-----TGQ-AGLTGFVKGLWGWG 575
>gi|291237178|ref|XP_002738515.1| PREDICTED: signal recognition particle 68-like [Saccoglossus
kowalevskii]
Length = 502
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 42/58 (72%), Gaps = 9/58 (15%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
QPIP KPLFFD+A N +EFPSLEDK V+ K AAGG G++GFVKG W WGG K
Sbjct: 454 QPIPCKPLFFDIAFNHVEFPSLEDK--VEQKKAAGG------GLTGFVKG-WLWGGKK 502
>gi|91089191|ref|XP_974448.1| PREDICTED: similar to signal recognition particle 68 kDa protein
[Tribolium castaneum]
gi|270012460|gb|EFA08908.1| hypothetical protein TcasGA2_TC006613 [Tribolium castaneum]
Length = 563
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
M+PIPAKPLF+DLA N +E P L +KL+ K G AGISGFVKGLWGWG
Sbjct: 512 MEPIPAKPLFYDLALNFVELPDLTEKLEGGQKKEKG------AGISGFVKGLWGWG 561
>gi|321478017|gb|EFX88975.1| hypothetical protein DAPPUDRAFT_220901 [Daphnia pulex]
Length = 598
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 8/59 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
M P+P KPLFFDLA N + FPSL + ++ K AGI+GFVKGLWGWGG K
Sbjct: 548 MAPVPCKPLFFDLALNHISFPSLAENMENK--------KSTGAGITGFVKGLWGWGGKK 598
>gi|350398272|ref|XP_003485143.1| PREDICTED: signal recognition particle 68 kDa protein-like isoform
1 [Bombus impatiens]
gi|350398275|ref|XP_003485144.1| PREDICTED: signal recognition particle 68 kDa protein-like isoform
2 [Bombus impatiens]
Length = 575
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
MQPI KPLFFDLA N +EFP L +KL + K G AG++GFVKGLWGWG
Sbjct: 524 MQPISCKPLFFDLAFNMVEFPDLSEKLGNQTK------KGGQAGLTGFVKGLWGWG 573
>gi|170044520|ref|XP_001849893.1| signal recognition particle 68 kDa protein [Culex quinquefasciatus]
gi|167867633|gb|EDS31016.1| signal recognition particle 68 kDa protein [Culex quinquefasciatus]
Length = 613
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 6/50 (12%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
MQPIPAKPLFFDLA N +EFPSL+DK++ K GG+ Q AG+SGFVK
Sbjct: 559 MQPIPAKPLFFDLALNFVEFPSLDDKVEQK------GGAKQTAGMSGFVK 602
>gi|405978121|gb|EKC42535.1| Signal recognition particle 68 kDa protein [Crassostrea gigas]
Length = 589
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 7/58 (12%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
+PIP +PLFFDLA N ++ PSLE+ L+ K K A P G++GFVKG W WGG+K
Sbjct: 539 EPIPCRPLFFDLALNHIDLPSLEEHLEQKQKAA------NPKGLTGFVKG-WLWGGSK 589
>gi|198426218|ref|XP_002120160.1| PREDICTED: similar to signal recognition particle 68 (predicted)
[Ciona intestinalis]
Length = 635
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
P+P KPLFFDLA N + FPSL+ KL K P Q AGI+G + WGWGG K
Sbjct: 586 PVPCKPLFFDLALNHVTFPSLDKKLGKKENP-------QKAGITGLISNWWGWGGKK 635
>gi|322794117|gb|EFZ17326.1| hypothetical protein SINV_04815 [Solenopsis invicta]
Length = 573
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 7/56 (12%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
M+ IP KPLFFDLA N +EFP L K+ + K GQ AG++GFVKGLWGWG
Sbjct: 523 MRSIPCKPLFFDLAFNMVEFPDLSHKMGDQAK------RGQ-AGLTGFVKGLWGWG 571
>gi|289724810|gb|ADD18348.1| signal recognition particle subunit srp68 [Glossina morsitans
morsitans]
Length = 576
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 36/59 (61%), Gaps = 10/59 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
M+ IP KPLFFDLA N +E PSLE+KL K GISGFVKG GWGG K
Sbjct: 528 MEAIPCKPLFFDLALNYVELPSLEEKLQAPDK----------KGISGFVKGFLGWGGNK 576
>gi|148298713|ref|NP_001091777.1| putative signal recognition particle 68 kDa protein [Bombyx mori]
gi|111608121|gb|ABH10804.1| putative signal recognition particle 68 kDa protein [Bombyx mori]
Length = 599
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAKK 60
M+ IP KPLFFDLA N +EFP+L+D K A G Q AG++G VKG GWG + K
Sbjct: 546 MEAIPCKPLFFDLACNFVEFPNLDD------KTGATDGKKQGAGLTGLVKGFLGWGKSDK 599
>gi|158284960|ref|XP_308003.4| AGAP002183-PA [Anopheles gambiae str. PEST]
gi|157020844|gb|EAA03741.4| AGAP002183-PA [Anopheles gambiae str. PEST]
Length = 625
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIPAKPLFFDLA N ++FPSL+DK++ K G G AG+SGFVK
Sbjct: 568 MEPIPAKPLFFDLALNFVDFPSLDDKIEQK----GSTGKGATAGMSGFVK 613
>gi|312379330|gb|EFR25641.1| hypothetical protein AND_08864 [Anopheles darlingi]
Length = 625
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
M+PIPAKPLFFDLA N +EFPSLEDK+D + AAGG G AG++GFVKGL+ W
Sbjct: 566 MEPIPAKPLFFDLALNFVEFPSLEDKID---QKAAGGKGGAAAGMTGFVKGLFSW 617
>gi|443724095|gb|ELU12258.1| hypothetical protein CAPTEDRAFT_155942 [Capitella teleta]
Length = 489
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAKK 60
QPI KPLFFD+A + ++PSLEDKLD K Q GIS FVKG W WGG KK
Sbjct: 441 QPIACKPLFFDVALSLADYPSLEDKLDQK---------KQGGGISSFVKG-WLWGGGKK 489
>gi|260820132|ref|XP_002605389.1| hypothetical protein BRAFLDRAFT_120644 [Branchiostoma floridae]
gi|229290722|gb|EEN61399.1| hypothetical protein BRAFLDRAFT_120644 [Branchiostoma floridae]
Length = 615
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 10/59 (16%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAKK 60
QPIP KPLFFDLA N +EFPSL+D+L + K GG GI+ VKG W WGG K
Sbjct: 567 QPIPCKPLFFDLALNHVEFPSLQDRLAEQKK---GG------GIANMVKG-WFWGGGNK 615
>gi|357625885|gb|EHJ76174.1| putative signal recognition particle 68 kDa protein [Danaus
plexippus]
Length = 594
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAKK 60
M+ +P KPLFFDLA N +EFP+L+D K A Q AG++G VKG GWG K
Sbjct: 541 MEAVPCKPLFFDLACNFIEFPNLDD------KTGAANNKKQGAGLTGLVKGFLGWGKGDK 594
>gi|156359541|ref|XP_001624826.1| predicted protein [Nematostella vectensis]
gi|156211628|gb|EDO32726.1| predicted protein [Nematostella vectensis]
Length = 575
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 11/57 (19%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGA 58
QP+P KPLFFDLA N +EFPSL ++++ K + AGI+G+ KG W WGG
Sbjct: 529 QPVPCKPLFFDLALNHVEFPSLAERVETK----------KAAGITGYFKG-WLWGGG 574
>gi|307171063|gb|EFN63106.1| Signal recognition particle 68 kDa protein [Camponotus floridanus]
Length = 580
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 7/56 (12%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
M+ IP KPLFFDLA +EFP L K+ + K GQ AG++GFVKGLWGWG
Sbjct: 530 MRNIPCKPLFFDLAFFMVEFPELTHKMGDQAK------KGQ-AGLTGFVKGLWGWG 578
>gi|307202773|gb|EFN82064.1| Signal recognition particle 68 kDa protein [Harpegnathos saltator]
Length = 594
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
M+ IP KPLFFDLA N ++FP L K+ + K GQ +SGFVKG W WG
Sbjct: 543 MRSIPCKPLFFDLAFNMVDFPDLSHKMGDQAK------RGQAGLVSGFVKGFWNWG 592
>gi|444727819|gb|ELW68297.1| Signal recognition particle 68 kDa protein [Tupaia chinensis]
Length = 662
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 617 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 660
>gi|432113350|gb|ELK35762.1| Signal recognition particle 68 kDa protein [Myotis davidii]
Length = 586
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 541 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 584
>gi|157819325|ref|NP_001102310.1| signal recognition particle 68 kDa protein [Rattus norvegicus]
gi|392351757|ref|XP_003751011.1| PREDICTED: signal recognition particle 68 kDa protein [Rattus
norvegicus]
gi|149054841|gb|EDM06658.1| signal recognition particle 68 (predicted) [Rattus norvegicus]
gi|187469045|gb|AAI66787.1| Signal recognition particle 68 [Rattus norvegicus]
Length = 625
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 580 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 623
>gi|18044248|gb|AAH20238.1| SRP68 protein [Homo sapiens]
Length = 596
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 551 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 594
>gi|47271535|ref|NP_666144.3| signal recognition particle 68 kDa protein [Mus musculus]
gi|341942070|sp|Q8BMA6.2|SRP68_MOUSE RecName: Full=Signal recognition particle 68 kDa protein;
Short=SRP68
gi|47125516|gb|AAH70422.1| Signal recognition particle 68 [Mus musculus]
gi|148702621|gb|EDL34568.1| signal recognition particle 68 [Mus musculus]
Length = 625
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 580 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 623
>gi|6690741|gb|AAF24308.1|AF195951_1 signal recognition particle 68 [Homo sapiens]
Length = 619
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 574 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 617
>gi|54607206|ref|NP_001003271.2| signal recognition particle 68 kDa protein [Canis lupus familiaris]
gi|932|emb|CAA37773.1| 68kDA subunit of signal recognition particle [Canis lupus
familiaris]
Length = 616
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 571 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 614
>gi|26328771|dbj|BAC28124.1| unnamed protein product [Mus musculus]
Length = 625
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 580 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 623
>gi|134889|sp|Q00004.1|SRP68_CANFA RecName: Full=Signal recognition particle 68 kDa protein;
Short=SRP68
gi|227342|prf||1702226A SRP68 protein
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 577 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 620
>gi|417403391|gb|JAA48502.1| Putative signal recognition particle subunit srp68 [Desmodus
rotundus]
Length = 621
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 576 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 619
>gi|410981734|ref|XP_003997221.1| PREDICTED: signal recognition particle 68 kDa protein isoform 3
[Felis catus]
Length = 525
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 480 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 523
>gi|410981732|ref|XP_003997220.1| PREDICTED: signal recognition particle 68 kDa protein isoform 2
[Felis catus]
Length = 581
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 536 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 579
>gi|410981730|ref|XP_003997219.1| PREDICTED: signal recognition particle 68 kDa protein isoform 1
[Felis catus]
Length = 619
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 574 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 617
>gi|403280818|ref|XP_003931905.1| PREDICTED: signal recognition particle 68 kDa protein [Saimiri
boliviensis boliviensis]
Length = 580
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 535 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 578
>gi|397484280|ref|XP_003813305.1| PREDICTED: signal recognition particle 68 kDa protein isoform 2
[Pan paniscus]
Length = 526
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 481 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 524
>gi|397484278|ref|XP_003813304.1| PREDICTED: signal recognition particle 68 kDa protein isoform 1
[Pan paniscus]
Length = 621
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 576 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 619
>gi|395825910|ref|XP_003786163.1| PREDICTED: signal recognition particle 68 kDa protein [Otolemur
garnettii]
Length = 584
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 539 QPIPCKPLFFDLALNHVTFPPLEDKLEQKTK----------SGLTGYIKGIFGF 582
>gi|380798041|gb|AFE70896.1| signal recognition particle 68 kDa protein, partial [Macaca
mulatta]
Length = 609
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 564 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 607
>gi|355754394|gb|EHH58359.1| hypothetical protein EGM_08190, partial [Macaca fascicularis]
Length = 610
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 565 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 608
>gi|351696501|gb|EHA99419.1| Signal recognition particle 68 kDa protein [Heterocephalus glaber]
Length = 621
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 576 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 619
>gi|344291146|ref|XP_003417297.1| PREDICTED: signal recognition particle 68 kDa protein-like
[Loxodonta africana]
Length = 619
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 574 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 617
>gi|344248575|gb|EGW04679.1| Signal recognition particle 68 kDa protein [Cricetulus griseus]
Length = 525
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 480 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 523
>gi|332260152|ref|XP_003279149.1| PREDICTED: signal recognition particle 68 kDa protein isoform 1
[Nomascus leucogenys]
Length = 583
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 538 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 581
>gi|301769017|ref|XP_002919905.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 68 kDa
protein-like [Ailuropoda melanoleuca]
Length = 623
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 578 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 621
>gi|297273673|ref|XP_002800654.1| PREDICTED: signal recognition particle 68 kDa protein [Macaca
mulatta]
gi|402901126|ref|XP_003913507.1| PREDICTED: signal recognition particle 68 kDa protein [Papio
anubis]
Length = 526
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 481 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 524
>gi|297273670|ref|XP_001103427.2| PREDICTED: signal recognition particle 68 kDa protein isoform 5
[Macaca mulatta]
Length = 584
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 539 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 582
>gi|297273668|ref|XP_001103595.2| PREDICTED: signal recognition particle 68 kDa protein isoform 7
[Macaca mulatta]
Length = 591
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 546 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 589
>gi|296203239|ref|XP_002748798.1| PREDICTED: signal recognition particle 68 kDa protein isoform 4
[Callithrix jacchus]
Length = 525
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 480 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 523
>gi|296203233|ref|XP_002748795.1| PREDICTED: signal recognition particle 68 kDa protein isoform 1
[Callithrix jacchus]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 577 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 620
>gi|291413432|ref|XP_002722970.1| PREDICTED: signal recognition particle 68kDa [Oryctolagus
cuniculus]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 577 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 620
>gi|194375173|dbj|BAG62699.1| unnamed protein product [Homo sapiens]
Length = 526
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 481 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 524
>gi|194216626|ref|XP_001915704.1| PREDICTED: signal recognition particle 68 kDa protein-like [Equus
caballus]
Length = 623
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 578 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 621
>gi|397484282|ref|XP_003813306.1| PREDICTED: signal recognition particle 68 kDa protein isoform 3
[Pan paniscus]
gi|410052197|ref|XP_001150436.3| PREDICTED: signal recognition particle 68 kDa protein isoform 5
[Pan troglodytes]
Length = 583
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 538 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 581
>gi|355568938|gb|EHH25219.1| hypothetical protein EGK_09001 [Macaca mulatta]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 577 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 620
>gi|386781688|ref|NP_001247431.1| signal recognition particle 68 kDa protein isoform 2 [Homo sapiens]
gi|119609768|gb|EAW89362.1| signal recognition particle 68kDa, isoform CRA_e [Homo sapiens]
Length = 589
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 544 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 587
>gi|109118338|ref|XP_001103509.1| PREDICTED: signal recognition particle 68 kDa protein isoform 6
[Macaca mulatta]
Length = 593
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 548 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 591
>gi|24497620|ref|NP_055045.2| signal recognition particle 68 kDa protein isoform 1 [Homo sapiens]
gi|37154869|sp|Q9UHB9.2|SRP68_HUMAN RecName: Full=Signal recognition particle 68 kDa protein;
Short=SRP68
gi|22760309|dbj|BAC11145.1| unnamed protein product [Homo sapiens]
gi|119609765|gb|EAW89359.1| signal recognition particle 68kDa, isoform CRA_b [Homo sapiens]
Length = 627
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 582 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 625
>gi|21706844|gb|AAH33573.1| Srp68 protein [Mus musculus]
Length = 334
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 289 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 332
>gi|440895206|gb|ELR47467.1| Signal recognition particle 68 kDa protein [Bos grunniens mutus]
Length = 623
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 578 QPIPCKPLFFDLALNHVAFPPLEDKLEQKAK----------SGLTGYIKGIFGF 621
>gi|426238450|ref|XP_004013166.1| PREDICTED: signal recognition particle 68 kDa protein isoform 3
[Ovis aries]
Length = 525
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 480 QPIPCKPLFFDLALNHVAFPPLEDKLEQKAK----------SGLTGYIKGIFGF 523
>gi|426238448|ref|XP_004013165.1| PREDICTED: signal recognition particle 68 kDa protein isoform 2
[Ovis aries]
Length = 588
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 543 QPIPCKPLFFDLALNHVAFPPLEDKLEQKAK----------SGLTGYIKGIFGF 586
>gi|426238446|ref|XP_004013164.1| PREDICTED: signal recognition particle 68 kDa protein isoform 1
[Ovis aries]
Length = 626
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 581 QPIPCKPLFFDLALNHVAFPPLEDKLEQKAK----------SGLTGYIKGIFGF 624
>gi|347360951|ref|NP_001094649.2| signal recognition particle 68 kDa protein [Bos taurus]
Length = 626
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 581 QPIPCKPLFFDLALNHVAFPPLEDKLEQKAK----------SGLTGYIKGIFGF 624
>gi|152941216|gb|ABS45045.1| signal recognition particle 68kDa [Bos taurus]
Length = 618
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 573 QPIPCKPLFFDLALNHVAFPPLEDKLEQKAK----------SGLTGYIKGIFGF 616
>gi|151557085|gb|AAI50017.1| SRP68 protein [Bos taurus]
gi|296475978|tpg|DAA18093.1| TPA: signal recognition particle 68kDa [Bos taurus]
Length = 623
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 578 QPIPCKPLFFDLALNHVAFPPLEDKLEQKAK----------SGLTGYIKGIFGF 621
>gi|390341339|ref|XP_003725432.1| PREDICTED: signal recognition particle 68 kDa protein
[Strongylocentrotus purpuratus]
Length = 600
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
+P+P KPLFFD+A N LEFPSLEDKL+ A GG G+ GL GWG
Sbjct: 552 KPVPCKPLFFDIALNHLEFPSLEDKLETNKAANAKGGIGR------LPLGLVGWG 600
>gi|328722672|ref|XP_001943603.2| PREDICTED: signal recognition particle 68 kDa protein-like isoform
1 [Acyrthosiphon pisum]
gi|328722674|ref|XP_003247634.1| PREDICTED: signal recognition particle 68 kDa protein-like isoform
2 [Acyrthosiphon pisum]
gi|328722676|ref|XP_003247635.1| PREDICTED: signal recognition particle 68 kDa protein-like isoform
3 [Acyrthosiphon pisum]
Length = 580
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
M+ IP KPLFFD+A N ++ P + + V PA GISGFVKGLWGWGG K
Sbjct: 529 MEEIPCKPLFFDVALNFVKLPVFKKQQPVS-DPA------NKEGISGFVKGLWGWGGKK 580
>gi|297273666|ref|XP_001103682.2| PREDICTED: signal recognition particle 68 kDa protein isoform 8
[Macaca mulatta]
Length = 679
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 634 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 677
>gi|354489476|ref|XP_003506888.1| PREDICTED: signal recognition particle 68 kDa protein-like
[Cricetulus griseus]
Length = 683
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 638 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 681
>gi|348551320|ref|XP_003461478.1| PREDICTED: signal recognition particle 68 kDa protein-like [Cavia
porcellus]
Length = 630
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QP+P KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 585 QPVPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 628
>gi|56757679|gb|AAW26983.1| SJCHGC09421 protein [Schistosoma japonicum]
Length = 217
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 6/58 (10%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
+P+P KP+FFDLA N + FPSL+DK+ K GS +P+GI+G ++G W W G++
Sbjct: 162 RPVPVKPIFFDLALNHINFPSLDDKIGGKTS-----GSSKPSGITGLMRG-WLWRGSE 213
>gi|441643659|ref|XP_004090536.1| PREDICTED: signal recognition particle 68 kDa protein isoform 2
[Nomascus leucogenys]
Length = 288
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 243 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 286
>gi|431908756|gb|ELK12348.1| Signal recognition particle 68 kDa protein [Pteropus alecto]
Length = 702
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 657 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 700
>gi|14041927|dbj|BAB55041.1| unnamed protein product [Homo sapiens]
Length = 335
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 290 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 333
>gi|410052199|ref|XP_003953241.1| PREDICTED: signal recognition particle 68 kDa protein [Pan
troglodytes]
Length = 288
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 243 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 286
>gi|427793651|gb|JAA62277.1| Putative signal recognition particle subunit srp68, partial
[Rhipicephalus pulchellus]
Length = 611
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 11/55 (20%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKG-LWGW 55
+PIP KPLFFDLA N +EFPSL+D +D K GQ G++GFVKG L GW
Sbjct: 565 EPIPCKPLFFDLALNHIEFPSLDDVVDTK--------KGQ--GLTGFVKGWLGGW 609
>gi|386781696|ref|NP_001247432.1| signal recognition particle 68 kDa protein isoform 3 [Homo sapiens]
gi|426346849|ref|XP_004041083.1| PREDICTED: signal recognition particle 68 kDa protein-like [Gorilla
gorilla gorilla]
gi|119609766|gb|EAW89360.1| signal recognition particle 68kDa, isoform CRA_c [Homo sapiens]
gi|193783646|dbj|BAG53557.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 243 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 286
>gi|449283088|gb|EMC89791.1| Signal recognition particle 68 kDa protein, partial [Columba livia]
Length = 566
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 521 QPIPCKPLFFDLALNHVAFPPLEDKVEQKAK----------SGLTGYIKGIFGF 564
>gi|387018690|gb|AFJ51463.1| Signal recognition particle 68 kDa protein [Crotalus adamanteus]
Length = 591
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 546 QPIPCKPLFFDLALNHVTFPPLEDKVEQKAK----------SGLTGYIKGIFGF 589
>gi|326930734|ref|XP_003211497.1| PREDICTED: signal recognition particle 68 kDa protein-like
[Meleagris gallopavo]
Length = 588
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 543 QPIPCKPLFFDLALNHVAFPPLEDKVEQKAK----------SGLTGYIKGIFGF 586
>gi|193785146|dbj|BAG54299.1| unnamed protein product [Homo sapiens]
Length = 589
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LED+L+ K K +G++G++KG++G+
Sbjct: 544 QPIPCKPLFFDLALNHVAFPPLEDELEQKTK----------SGLTGYIKGIFGF 587
>gi|57525247|ref|NP_001006204.1| signal recognition particle 68 kDa protein [Gallus gallus]
gi|53133862|emb|CAG32260.1| hypothetical protein RCJMB04_21b8 [Gallus gallus]
Length = 602
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 557 QPIPCKPLFFDLALNHVAFPPLEDKVEQKAK----------SGLTGYIKGIFGF 600
>gi|449479188|ref|XP_004176386.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 68 kDa
protein [Taeniopygia guttata]
Length = 602
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 557 QPIPCKPLFFDLALNHVAFPPLEDKVEQKAK----------SGLTGYIKGIFGF 600
>gi|350590138|ref|XP_003482996.1| PREDICTED: signal recognition particle 68 kDa protein-like [Sus
scrofa]
Length = 319
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QP+P KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 274 QPVPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLAGYIKGIFGF 317
>gi|195378198|ref|XP_002047871.1| GJ11691 [Drosophila virilis]
gi|194155029|gb|EDW70213.1| GJ11691 [Drosophila virilis]
Length = 606
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N LE PSLEDKL+ P G S I+GFVK
Sbjct: 554 MEPIPCKPLFFDLAMNYLELPSLEDKLE---SPGKKGAS-----ITGFVK 595
>gi|195129173|ref|XP_002009033.1| GI13825 [Drosophila mojavensis]
gi|193920642|gb|EDW19509.1| GI13825 [Drosophila mojavensis]
Length = 606
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N LE PSLEDKL+ P G S I+GFVK
Sbjct: 554 MEPIPCKPLFFDLAMNYLELPSLEDKLE---SPGKKGAS-----ITGFVK 595
>gi|195017218|ref|XP_001984559.1| GH16536 [Drosophila grimshawi]
gi|193898041|gb|EDV96907.1| GH16536 [Drosophila grimshawi]
Length = 607
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N LE PSLEDKL+ P G S I+GFVK
Sbjct: 555 MEPIPCKPLFFDLAMNYLELPSLEDKLE---SPGKKGAS-----ITGFVK 596
>gi|432843207|ref|XP_004065567.1| PREDICTED: signal recognition particle 68 kDa protein-like [Oryzias
latipes]
Length = 592
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
QPIP KPLFFDLA N + FP L+DK++ K K G++G++KG++G+G
Sbjct: 547 QPIPCKPLFFDLALNHVTFPPLDDKVEQKGK----------GGLTGYIKGIFGFG 591
>gi|348520892|ref|XP_003447961.1| PREDICTED: signal recognition particle 68 kDa protein-like
[Oreochromis niloticus]
Length = 591
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
QPIP KPLFFDLA N + FP L+DK++ K K G++G++KG++G+G
Sbjct: 546 QPIPCKPLFFDLALNHVAFPPLDDKVEQKGK----------GGLTGYIKGIFGFG 590
>gi|345321055|ref|XP_001512922.2| PREDICTED: signal recognition particle 68 kDa protein
[Ornithorhynchus anatinus]
Length = 589
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 544 QPIPCKPLFFDLALNHVAFPPLEDKVEQKPK----------SGLTGYIKGIFGF 587
>gi|301621385|ref|XP_002940024.1| PREDICTED: signal recognition particle 68 kDa protein, partial
[Xenopus (Silurana) tropicalis]
Length = 571
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
PIP KPLFFDLA N + FPSLEDKL+ K K +G++G+ KG +G+
Sbjct: 526 HPIPCKPLFFDLALNHVTFPSLEDKLEQKAK----------SGLTGYFKGFFGF 569
>gi|183985744|gb|AAI66278.1| LOC100158589 protein [Xenopus (Silurana) tropicalis]
Length = 438
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
PIP KPLFFDLA N + FPSLEDKL+ K K +G++G+ KG +G+
Sbjct: 393 HPIPCKPLFFDLALNHVTFPSLEDKLEQKAK----------SGLTGYFKGFFGF 436
>gi|349604126|gb|AEP99765.1| Signal recognition particle 68 kDa protein-like protein, partial
[Equus caballus]
Length = 250
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 205 QPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 248
>gi|47214953|emb|CAG10775.1| unnamed protein product [Tetraodon nigroviridis]
Length = 571
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
QPIP KPLFFDLA N + FP L+DK++ K K G++G++KG++G+G
Sbjct: 526 QPIPCKPLFFDLALNHVAFPPLDDKVEQKGK----------GGLTGYIKGIFGFG 570
>gi|395533015|ref|XP_003768559.1| PREDICTED: signal recognition particle 68 kDa protein [Sarcophilus
harrisii]
Length = 665
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
+PIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 620 KPIPCKPLFFDLALNHVAFPPLEDKVEQKTK----------SGLTGYIKGIFGF 663
>gi|297701826|ref|XP_002827898.1| PREDICTED: signal recognition particle 68 kDa protein-like [Pongo
abelii]
Length = 288
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
+P+P KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 243 RPVPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 286
>gi|410058157|ref|XP_001169077.3| PREDICTED: signal recognition particle 68 kDa protein-like [Pan
troglodytes]
Length = 115
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 69 FQPIPCKPLFFDLALNHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGF 113
>gi|443718237|gb|ELU08968.1| hypothetical protein CAPTEDRAFT_222435 [Capitella teleta]
Length = 117
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 38/60 (63%), Gaps = 10/60 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAKK 60
QPI KPLFFD+A + ++PSLEDKLD K Q GISGFVKG W WGG KK
Sbjct: 68 FQPIACKPLFFDVALSLADYPSLEDKLDQK---------KQGGGISGFVKG-WLWGGGKK 117
>gi|334322896|ref|XP_001369190.2| PREDICTED: signal recognition particle 68 kDa protein [Monodelphis
domestica]
Length = 615
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
+PIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 570 KPIPCKPLFFDLALNHVAFPPLEDKVEQKTK----------SGLTGYIKGIFGF 613
>gi|195490999|ref|XP_002093377.1| GE20795 [Drosophila yakuba]
gi|194179478|gb|EDW93089.1| GE20795 [Drosophila yakuba]
Length = 605
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N +E PSLEDKL+ P G S I+GFVK
Sbjct: 553 MEPIPCKPLFFDLAMNYVELPSLEDKLE---SPGKKGPS-----ITGFVK 594
>gi|194748839|ref|XP_001956849.1| GF24369 [Drosophila ananassae]
gi|190624131|gb|EDV39655.1| GF24369 [Drosophila ananassae]
Length = 604
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N +E PSLEDKL+ P G S I+GFVK
Sbjct: 553 MEPIPCKPLFFDLAMNYVELPSLEDKLE---SPGKKGPS-----ITGFVK 594
>gi|195588919|ref|XP_002084204.1| GD14144 [Drosophila simulans]
gi|194196213|gb|EDX09789.1| GD14144 [Drosophila simulans]
Length = 604
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KP+FFDLA +EFPSLEDKL+ P G S I+GFVK
Sbjct: 552 MEPIPCKPIFFDLAMTYVEFPSLEDKLE---SPGKKGAS-----ITGFVK 593
>gi|195326181|ref|XP_002029808.1| GM25108 [Drosophila sechellia]
gi|194118751|gb|EDW40794.1| GM25108 [Drosophila sechellia]
Length = 604
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KP+FFDLA +EFPSLEDKL+ P G S I+GFVK
Sbjct: 552 MEPIPCKPIFFDLAMTYVEFPSLEDKLE---SPGKKGAS-----ITGFVK 593
>gi|198466896|ref|XP_001354174.2| GA18632 [Drosophila pseudoobscura pseudoobscura]
gi|198149603|gb|EAL31226.2| GA18632 [Drosophila pseudoobscura pseudoobscura]
Length = 604
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N +E PSLEDKL+ + K A I+GFVK
Sbjct: 551 MEPIPCKPLFFDLAMNYVELPSLEDKLEQEGKKG--------ASITGFVK 592
>gi|195174526|ref|XP_002028024.1| GL15071 [Drosophila persimilis]
gi|194115746|gb|EDW37789.1| GL15071 [Drosophila persimilis]
Length = 591
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N +E PSLEDKL+ + K A I+GFVK
Sbjct: 538 MEPIPCKPLFFDLAMNYVELPSLEDKLEQEGKKG--------ASITGFVK 579
>gi|410933255|ref|XP_003980007.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 68 kDa
protein-like [Takifugu rubripes]
Length = 606
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
QPIP KPLFFDLA N + FP L++K++ K K G++G++KG++G+G
Sbjct: 561 QPIPCKPLFFDLALNHVAFPPLDEKVEQKGK----------GGLTGYIKGIFGFG 605
>gi|327264995|ref|XP_003217294.1| PREDICTED: signal recognition particle 68 kDa protein-like [Anolis
carolinensis]
Length = 466
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + P LEDK++ K K +G++G++KG++G+
Sbjct: 421 QPIPCKPLFFDLALNHVTLPPLEDKVEQKSK----------SGLTGYIKGIFGF 464
>gi|256082997|ref|XP_002577737.1| signal recognition particle 68 kD protein [Schistosoma mansoni]
gi|360044904|emb|CCD82452.1| putative signal recognition particle 68 kD protein [Schistosoma
mansoni]
Length = 637
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
P+P KP+FFDLA N + FPSL+DK+ +K + +G++G ++G W W G++
Sbjct: 582 HPVPVKPIFFDLALNHINFPSLDDKIGLK-----ASAPSKSSGLTGLMRG-WLWRGSE 633
>gi|153791259|ref|NP_001093374.1| signal recognition particle 68kDa [Xenopus laevis]
gi|148922158|gb|AAI46624.1| LOC100101323 protein [Xenopus laevis]
Length = 600
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 10/54 (18%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
PIP KPLFFDLA N + PSLEDKL+ K K +G++G+ KG +G+
Sbjct: 555 HPIPCKPLFFDLALNHVTLPSLEDKLEQKAK----------SGLTGYFKGFFGF 598
>gi|328722664|ref|XP_003247631.1| PREDICTED: signal recognition particle 68 kDa protein-like
[Acyrthosiphon pisum]
Length = 145
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGGAK 59
M+ IP KPLFFD+A N ++ P + K +P + + + GISGFVKGLWGWGG K
Sbjct: 94 MEEIPCKPLFFDVALNFVKLPVFK-----KQQPVSDPANKE--GISGFVKGLWGWGGKK 145
>gi|195442591|ref|XP_002069036.1| GK12346 [Drosophila willistoni]
gi|194165121|gb|EDW80022.1| GK12346 [Drosophila willistoni]
Length = 603
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N +E PSLE KL+ + G G A I+GFVK
Sbjct: 551 MEPIPCKPLFFDLAMNYMELPSLESKLE------SSGKKG--ASITGFVK 592
>gi|345308447|ref|XP_003428694.1| PREDICTED: signal recognition particle 68 kDa protein-like, partial
[Ornithorhynchus anatinus]
Length = 118
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
QPIP KPLFFDLA N + FP LEDK++ K K +G++G++KG++G+
Sbjct: 72 FQPIPCKPLFFDLALNHVAFPPLEDKVEQKPK----------SGLTGYIKGIFGF 116
>gi|194865738|ref|XP_001971579.1| GG14364 [Drosophila erecta]
gi|190653362|gb|EDV50605.1| GG14364 [Drosophila erecta]
Length = 605
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 32/50 (64%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KPLFFDLA N +E PSLEDKL+ P G S I+G VK
Sbjct: 553 MEPIPCKPLFFDLAMNYVELPSLEDKLE---SPGKKGPS-----ITGIVK 594
>gi|241573370|ref|XP_002402988.1| signal recognition particle 68 kDa protein, putative [Ixodes
scapularis]
gi|215502112|gb|EEC11606.1| signal recognition particle 68 kDa protein, putative [Ixodes
scapularis]
Length = 525
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 11/55 (20%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKG-LWGW 55
+PI KPLFFDLA N +EFPSLED D K + G++G VKG L GW
Sbjct: 479 EPIACKPLFFDLALNHMEFPSLEDVADTK----------KNQGLTGLVKGWLGGW 523
>gi|242017789|ref|XP_002429369.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514278|gb|EEB16631.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 596
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 7/49 (14%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFV 49
M+P+P KPLFFDLA N EFPSL+ K+D S Q G++GFV
Sbjct: 544 MRPVPCKPLFFDLAFNFAEFPSLDHKIDTP-------KSKQNPGLTGFV 585
>gi|21355591|ref|NP_648273.1| signal recognition particle protein 68 [Drosophila melanogaster]
gi|12230644|sp|Q9VSS2.1|SRP68_DROME RecName: Full=Signal recognition particle 68 kDa protein;
Short=SRP68
gi|7295013|gb|AAF50341.1| signal recognition particle protein 68 [Drosophila melanogaster]
gi|16198221|gb|AAL13927.1| LD41750p [Drosophila melanogaster]
gi|220946370|gb|ACL85728.1| Srp68-PA [synthetic construct]
Length = 604
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 8/50 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVK 50
M+PIP KP+FFDLA +E PSLE KL+ P G S I+GFVK
Sbjct: 552 MEPIPCKPIFFDLAMTYVELPSLEGKLE---SPGKKGAS-----ITGFVK 593
>gi|297715696|ref|XP_002834201.1| PREDICTED: signal recognition particle 68 kDa protein-like, partial
[Pongo abelii]
Length = 117
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 10/57 (17%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWGG 57
QP+P KPL FDLA + + FP LEDKL+ K K +G++G++KG++G+
Sbjct: 71 FQPVPCKPLSFDLALSHVAFPPLEDKLEQKTK----------SGLTGYIKGIFGFRS 117
>gi|332028928|gb|EGI68946.1| Signal recognition particle 68 kDa protein [Acromyrmex echinatior]
Length = 523
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 7/51 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKG 51
M+ IP KPLFFDLA N +EFP L K+ + K GQ AG++GFVKG
Sbjct: 438 MRSIPCKPLFFDLAFNMVEFPDLSHKMGDQAK------RGQ-AGLTGFVKG 481
>gi|195999778|ref|XP_002109757.1| hypothetical protein TRIADDRAFT_52953 [Trichoplax adhaerens]
gi|190587881|gb|EDV27923.1| hypothetical protein TRIADDRAFT_52953 [Trichoplax adhaerens]
Length = 634
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGG 37
+PIP KPLFFD+A N +EFPSL+ +++ K GG
Sbjct: 502 EPIPCKPLFFDIANNYVEFPSLDHRMEQKKSGGIGG 537
>gi|308504601|ref|XP_003114484.1| hypothetical protein CRE_27390 [Caenorhabditis remanei]
gi|308261869|gb|EFP05822.1| hypothetical protein CRE_27390 [Caenorhabditis remanei]
Length = 619
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 21/74 (28%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKLDV--------KIKPAAGGGSGQPA----------- 43
P+P KP+FFDLA L P++ED+L+ K GGS P+
Sbjct: 545 PMPNKPIFFDLANFHLSMPNVEDRLEKLQKDRDAHSPKKTPKGGSAAPSKSSDPKEGDKQ 604
Query: 44 -GISGFVKGLWGWG 56
GISG V G W WG
Sbjct: 605 QGISGMVSG-WFWG 617
>gi|324508384|gb|ADY43539.1| Signal recognition particle 68 kDa protein [Ascaris suum]
Length = 622
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 19/72 (26%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKLDV---------------KIKPAAGGGSGQP---AG 44
P+P KP+FFDLA N ++ P LE K+ K A GG P G
Sbjct: 550 PMPNKPMFFDLALNHIKMPDLETKIASYGTNEKKNTSKQQADSGKKAKGGQQAVPEQEQG 609
Query: 45 ISGFVKGLWGWG 56
I G VKG W WG
Sbjct: 610 IGGMVKG-WFWG 620
>gi|111226452|ref|XP_001134536.1| signal recognition particle 68 kDa subunit [Dictyostelium
discoideum AX4]
gi|121962466|sp|Q1ZXE8.1|SRP68_DICDI RecName: Full=Signal recognition particle subunit SRP68; AltName:
Full=Signal recognition particle 68 kDa protein homolog
gi|90970580|gb|EAS66853.1| signal recognition particle 68 kDa subunit [Dictyostelium
discoideum AX4]
Length = 614
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 12/57 (21%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPA-GISGFVKGLWGWG 56
+QP+ AKP+FFDLA N + FPSL+ + G +G P+ G+ GF WG G
Sbjct: 569 LQPVQAKPIFFDLAFNSVTFPSLDQR-------KKGSSTGTPSKGLFGF----WGRG 614
>gi|38047927|gb|AAR09866.1| similar to Drosophila melanogaster CG5064, partial [Drosophila
yakuba]
Length = 226
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLE 24
M+PIP KPLFFDLA N +E PSLE
Sbjct: 203 MEPIPCKPLFFDLAMNYVELPSLE 226
>gi|281212662|gb|EFA86822.1| signal recognition particle 68 kDa subunit [Polysphondylium
pallidum PN500]
Length = 619
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
+QP P KPLFFDLA NQ +FPSLE +
Sbjct: 578 LQPAPTKPLFFDLAFNQCQFPSLEAR 603
>gi|298400581|gb|ADI81610.1| signal recognition particle [Heliconius heurippa]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400549|gb|ADI81594.1| signal recognition particle [Heliconius heurippa]
gi|298400551|gb|ADI81595.1| signal recognition particle [Heliconius heurippa]
gi|298400553|gb|ADI81596.1| signal recognition particle [Heliconius heurippa]
gi|298400555|gb|ADI81597.1| signal recognition particle [Heliconius heurippa]
gi|298400561|gb|ADI81600.1| signal recognition particle [Heliconius heurippa]
gi|298400563|gb|ADI81601.1| signal recognition particle [Heliconius heurippa]
gi|298400573|gb|ADI81606.1| signal recognition particle [Heliconius heurippa]
gi|298400575|gb|ADI81607.1| signal recognition particle [Heliconius heurippa]
gi|298400577|gb|ADI81608.1| signal recognition particle [Heliconius heurippa]
gi|298400579|gb|ADI81609.1| signal recognition particle [Heliconius heurippa]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400543|gb|ADI81591.1| signal recognition particle [Heliconius melpomene melpomene]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400535|gb|ADI81587.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400591|gb|ADI81615.1| signal recognition particle [Heliconius cydno cordula]
gi|298400595|gb|ADI81617.1| signal recognition particle [Heliconius cydno cordula]
gi|298400627|gb|ADI81633.1| signal recognition particle [Heliconius cydno cordula]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400527|gb|ADI81583.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400619|gb|ADI81629.1| signal recognition particle [Heliconius cydno cordula]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400525|gb|ADI81582.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400533|gb|ADI81586.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400539|gb|ADI81589.1| signal recognition particle [Heliconius melpomene melpomene]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400513|gb|ADI81576.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400517|gb|ADI81578.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400519|gb|ADI81579.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400521|gb|ADI81580.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400523|gb|ADI81581.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400529|gb|ADI81584.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400531|gb|ADI81585.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400537|gb|ADI81588.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400541|gb|ADI81590.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400545|gb|ADI81592.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400547|gb|ADI81593.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400589|gb|ADI81614.1| signal recognition particle [Heliconius cydno cordula]
gi|298400593|gb|ADI81616.1| signal recognition particle [Heliconius cydno cordula]
gi|298400597|gb|ADI81618.1| signal recognition particle [Heliconius cydno cordula]
gi|298400599|gb|ADI81619.1| signal recognition particle [Heliconius cydno cordula]
gi|298400605|gb|ADI81622.1| signal recognition particle [Heliconius cydno cordula]
gi|298400607|gb|ADI81623.1| signal recognition particle [Heliconius cydno cordula]
gi|298400609|gb|ADI81624.1| signal recognition particle [Heliconius cydno cordula]
gi|298400613|gb|ADI81626.1| signal recognition particle [Heliconius cydno cordula]
gi|298400617|gb|ADI81628.1| signal recognition particle [Heliconius cydno cordula]
gi|298400625|gb|ADI81632.1| signal recognition particle [Heliconius cydno cordula]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400511|gb|ADI81575.1| signal recognition particle [Heliconius melpomene melpomene]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400509|gb|ADI81574.1| signal recognition particle [Heliconius melpomene melpomene]
gi|298400515|gb|ADI81577.1| signal recognition particle [Heliconius melpomene melpomene]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|187607692|ref|NP_001120316.1| uncharacterized protein LOC100145378 [Xenopus (Silurana)
tropicalis]
gi|268838297|ref|NP_001005401.2| signal recognition particle 68 [Danio rerio]
gi|156914907|gb|AAI52636.1| Srp68 protein [Danio rerio]
gi|170284890|gb|AAI60941.1| LOC100145378 protein [Xenopus (Silurana) tropicalis]
Length = 593
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIK 32
QPIP KPLFFDLA N + P L+DK++ K K
Sbjct: 548 QPIPCKPLFFDLALNHVVLPPLDDKVEQKGK 578
>gi|298400623|gb|ADI81631.1| signal recognition particle [Heliconius cydno cordula]
Length = 296
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGG 38
M+ +P KPLFFDLA N +EFP+L+DK G G
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDDKTGAANNKKQGAG 295
>gi|298400601|gb|ADI81620.1| signal recognition particle [Heliconius cydno cordula]
gi|298400603|gb|ADI81621.1| signal recognition particle [Heliconius cydno cordula]
gi|298400621|gb|ADI81630.1| signal recognition particle [Heliconius cydno cordula]
Length = 296
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGG 38
M+ +P KPLFFDLA N +EFP+L+DK G G
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDDKTGAANNKKQGAG 295
>gi|298400557|gb|ADI81598.1| signal recognition particle [Heliconius heurippa]
gi|298400559|gb|ADI81599.1| signal recognition particle [Heliconius heurippa]
Length = 295
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGG 38
M+ +P KPLFFDLA N +EFP+L+DK G G
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDDKTGAANNKKQGAG 295
>gi|340376726|ref|XP_003386883.1| PREDICTED: signal recognition particle 68 kDa protein-like
[Amphimedon queenslandica]
Length = 598
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 12/54 (22%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
P+ KPLFFDLA +E PSL + + + GG G++GFVKGL+ WG
Sbjct: 555 PLSGKPLFFDLALGHIEMPSLSHRAERR-----GG------GLTGFVKGLF-WG 596
>gi|402592911|gb|EJW86838.1| hypothetical protein WUBG_02249 [Wuchereria bancrofti]
Length = 313
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 18/70 (25%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKL-------------DVKIKPAAGGGSGQ----PAGI 45
P+P KP+FFDLA N ++ P+LE K+ + KIK A + GI
Sbjct: 243 PMPNKPMFFDLALNHIKMPNLESKIASYGFEKKETSQNNEKIKKGAKSKQDEQDASQQGI 302
Query: 46 SGFVKGLWGW 55
G VKG W W
Sbjct: 303 GGLVKG-WFW 311
>gi|312078723|ref|XP_003141862.1| signal recognition particle 68 [Loa loa]
gi|307762972|gb|EFO22206.1| signal recognition particle 68 [Loa loa]
Length = 620
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 18/70 (25%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKL-----------------DVKIKPAAGGGSGQPAGI 45
P+P KP+FFDLA N ++ P LE K+ + + K G GI
Sbjct: 550 PMPNKPMFFDLALNHIKMPDLESKIASYAFDKKETSQRNERPEKEAKSKQGEQDANQQGI 609
Query: 46 SGFVKGLWGW 55
G VKG W W
Sbjct: 610 GGLVKG-WFW 618
>gi|345097223|gb|AEN68113.1| signal recognition particle [Heliconius numata silvana]
gi|345097225|gb|AEN68114.1| signal recognition particle [Heliconius numata silvana]
gi|345097227|gb|AEN68115.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097221|gb|AEN68112.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097215|gb|AEN68109.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097211|gb|AEN68107.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097209|gb|AEN68106.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097207|gb|AEN68105.1| signal recognition particle [Heliconius numata silvana]
gi|345097213|gb|AEN68108.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097203|gb|AEN68103.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097197|gb|AEN68100.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097195|gb|AEN68099.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097177|gb|AEN68090.1| signal recognition particle [Heliconius numata aurora]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097163|gb|AEN68083.1| signal recognition particle [Heliconius numata aurora]
gi|345097183|gb|AEN68093.1| signal recognition particle [Heliconius numata aurora]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097159|gb|AEN68081.1| signal recognition particle [Heliconius numata aurora]
gi|345097161|gb|AEN68082.1| signal recognition particle [Heliconius numata aurora]
gi|345097169|gb|AEN68086.1| signal recognition particle [Heliconius numata aurora]
gi|345097171|gb|AEN68087.1| signal recognition particle [Heliconius numata aurora]
gi|345097175|gb|AEN68089.1| signal recognition particle [Heliconius numata aurora]
gi|345097191|gb|AEN68097.1| signal recognition particle [Heliconius numata aurora]
gi|345097193|gb|AEN68098.1| signal recognition particle [Heliconius numata aurora]
gi|345097199|gb|AEN68101.1| signal recognition particle [Heliconius numata silvana]
gi|345097205|gb|AEN68104.1| signal recognition particle [Heliconius numata silvana]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097157|gb|AEN68080.1| signal recognition particle [Heliconius numata aurora]
gi|345097165|gb|AEN68084.1| signal recognition particle [Heliconius numata aurora]
gi|345097167|gb|AEN68085.1| signal recognition particle [Heliconius numata aurora]
gi|345097185|gb|AEN68094.1| signal recognition particle [Heliconius numata aurora]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|345097155|gb|AEN68079.1| signal recognition particle [Heliconius numata arcuella]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EFP+L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFPNLDDK 277
>gi|298400585|gb|ADI81612.1| signal recognition particle [Heliconius heurippa]
gi|298400587|gb|ADI81613.1| signal recognition particle [Heliconius heurippa]
Length = 297
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N ++FP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVDFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400565|gb|ADI81602.1| signal recognition particle [Heliconius heurippa]
gi|298400567|gb|ADI81603.1| signal recognition particle [Heliconius heurippa]
gi|298400569|gb|ADI81604.1| signal recognition particle [Heliconius heurippa]
gi|298400571|gb|ADI81605.1| signal recognition particle [Heliconius heurippa]
Length = 297
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N ++FP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVDFPNLDD------KTGAANNKKQGAGIT 297
>gi|358341652|dbj|GAA49270.1| signal recognition particle subunit SRP68 [Clonorchis sinensis]
Length = 745
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDV----KIKPAAGGGSGQPA 43
+P+P KP+FFDLA N + FPSL +K I GG +PA
Sbjct: 588 EPVPVKPIFFDLALNHVNFPSLTEKTSTGTSKDISLQVGGHRKRPA 633
>gi|339246341|ref|XP_003374804.1| signal recognition protein [Trichinella spiralis]
gi|316971931|gb|EFV55644.1| signal recognition protein [Trichinella spiralis]
Length = 680
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 3 PIPAKPLFFDLAQNQLEFP-SLEDKLDVKIKPAAGGGSGQPAGISGFVKG 51
PIP KPLFFDLA N + FP SL++ LD + + G+SGFVK
Sbjct: 520 PIPCKPLFFDLALNYVRFPSSLDETLD---EMELNKQDNKAGGLSGFVKA 566
>gi|391343606|ref|XP_003746098.1| PREDICTED: signal recognition particle 68 kDa protein-like
[Metaseiulus occidentalis]
Length = 570
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 8/50 (16%)
Query: 7 KPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKG-LWGW 55
KPLFFDLA N + FP L+++ + + + Q AG++G VKG L GW
Sbjct: 527 KPLFFDLALNHVVFPDLDEETETRKEQ-------QGAGLTGLVKGWLGGW 569
>gi|298400583|gb|ADI81611.1| signal recognition particle [Heliconius heurippa]
Length = 297
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P KPLFFDLA N +EFP+L+ K A Q AGI+
Sbjct: 258 MEAVPCKPLFFDLACNFVEFPNLDH------KTGAANNKKQGAGIT 297
>gi|268557454|ref|XP_002636716.1| Hypothetical protein CBG23435 [Caenorhabditis briggsae]
Length = 612
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 19/68 (27%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKL-------DVKIKPAAG-GGSGQP-----------A 43
P+P KP+FFDLA L P +ED+L D + G GGS P
Sbjct: 544 PMPNKPIFFDLANFHLTMPDVEDRLEKLQKDRDAQTPKKTGKGGSAAPNTSASKEGEGQQ 603
Query: 44 GISGFVKG 51
GISG V G
Sbjct: 604 GISGMVTG 611
>gi|170594599|ref|XP_001902051.1| signal recognition particle 68 [Brugia malayi]
gi|158590995|gb|EDP29610.1| signal recognition particle 68, putative [Brugia malayi]
Length = 619
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 18/70 (25%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKL-------------DVKIKPAAGGGS----GQPAGI 45
P+P KP+FFDLA N ++ P LE K+ + KIK A GI
Sbjct: 549 PMPNKPMFFDLALNHIKMPDLELKIASYGFEKKGTSQSNEKIKKGAKSKQDKQDASQQGI 608
Query: 46 SGFVKGLWGW 55
G VKG W W
Sbjct: 609 GGLVKG-WFW 617
>gi|328869416|gb|EGG17794.1| signal recognition particle 68 kDa subunit [Dictyostelium
fasciculatum]
Length = 574
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIK 32
+QP KP+FFDLA N EFPSLE++ + K
Sbjct: 536 LQPTTTKPMFFDLAFNSCEFPSLENRKKAQSK 567
>gi|298400615|gb|ADI81627.1| signal recognition particle [Heliconius cydno cordula]
Length = 297
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P K LFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKSLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|298400611|gb|ADI81625.1| signal recognition particle [Heliconius cydno cordula]
Length = 297
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGIS 46
M+ +P K LFFDLA N +EFP+L+D K A Q AGI+
Sbjct: 258 MEAVPCKSLFFDLACNFVEFPNLDD------KTGAANNKKQGAGIT 297
>gi|145228811|ref|XP_001388714.1| signal recognition particle [Aspergillus niger CBS 513.88]
gi|134054806|emb|CAK43646.1| unnamed protein product [Aspergillus niger]
gi|350637918|gb|EHA26274.1| hypothetical protein ASPNIDRAFT_206270 [Aspergillus niger ATCC
1015]
Length = 613
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQP 42
MQPIP KPLF D+A N +E+P + PAA QP
Sbjct: 560 MQPIPVKPLFLDVAWNYIEYPR-------QSTPAADNSQAQP 594
>gi|50549047|ref|XP_501994.1| YALI0C18997p [Yarrowia lipolytica]
gi|49647861|emb|CAG82314.1| YALI0C18997p [Yarrowia lipolytica CLIB122]
Length = 561
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLW 53
++P+ KP+FFD+A N +++P+ +V+ A GG Q SGF+ GL+
Sbjct: 512 LKPVLVKPVFFDIAYNYVDYPA-----EVQAVETAKGGEEQKTKKSGFLGGLF 559
>gi|330794538|ref|XP_003285335.1| hypothetical protein DICPUDRAFT_53497 [Dictyostelium purpureum]
gi|325084699|gb|EGC38121.1| hypothetical protein DICPUDRAFT_53497 [Dictyostelium purpureum]
Length = 617
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLE 24
++P+P KPLFFDLA N + FP+L+
Sbjct: 557 LEPVPVKPLFFDLAFNNVSFPTLD 580
>gi|66736427|gb|AAY54272.1| signal recognition particle 68kDa subunit [Caenorhabditis remanei]
Length = 102
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 21/74 (28%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKLD--------VKIKPAAGGGSGQPA----------- 43
P+P KP+FFDLA L P++ED+L+ K GGS P+
Sbjct: 28 PMPNKPIFFDLANFHLSMPNVEDRLEKLQKDRDAHSPKKTPKGGSAAPSKSSDPKEGDKQ 87
Query: 44 -GISGFVKGLWGWG 56
GISG V G W WG
Sbjct: 88 QGISGMVSG-WFWG 100
>gi|221130058|ref|XP_002156649.1| PREDICTED: signal recognition particle 68 kDa protein-like, partial
[Hydra magnipapillata]
Length = 161
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 12/57 (21%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGI-SGFVKGLWGWGG 57
QP P KPLFFDLA N ++ P+L+ +L+ K P G+ S +G WG
Sbjct: 116 QPTPCKPLFFDLALNYIDLPNLDHRLEKK-----------PEGVFSALRRGFGFWGS 161
>gi|345097173|gb|AEN68088.1| signal recognition particle [Heliconius numata aurora]
Length = 284
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDK 26
M+ +P KPLFFDLA N +EF +L+DK
Sbjct: 252 MEAVPCKPLFFDLACNFVEFTNLDDK 277
>gi|345563432|gb|EGX46432.1| hypothetical protein AOL_s00109g4 [Arthrobotrys oligospora ATCC
24927]
Length = 602
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLE 24
++PIP KP+FFD+A N +E+P LE
Sbjct: 541 VKPIPVKPIFFDIAWNYIEYPGLE 564
>gi|70990590|ref|XP_750144.1| signal recognition particle [Aspergillus fumigatus Af293]
gi|66847776|gb|EAL88106.1| signal recognition particle, putative [Aspergillus fumigatus Af293]
gi|159130624|gb|EDP55737.1| signal recognition particle, putative [Aspergillus fumigatus A1163]
Length = 646
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQ 41
MQPIP KPLF D+A N +++P + +P G G+ +
Sbjct: 593 MQPIPVKPLFLDVAWNYIDYPREGAHTQEETQPPKGTGTDE 633
>gi|225678074|gb|EEH16358.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 633
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLE----DKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
MQPIP KPL+ DLA N +++P D +K A G + A KG +G+G
Sbjct: 573 MQPIPVKPLYLDLAWNYIDYPRAAGRGGDGTGTAVKAEAAGQAPVQAAKGEGRKGWFGFG 632
>gi|341883194|gb|EGT39129.1| hypothetical protein CAEBREN_08632 [Caenorhabditis brenneri]
Length = 619
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 21/74 (28%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKLD---------VKIKPAAGGGSG------QP----- 42
P+P KP+FFDLA P++ ++L+ K A GG S QP
Sbjct: 545 PMPNKPIFFDLAIFHNTMPNVNERLERLQKDRDGQSPKKTAKGGASASSKTSDQPQGEGQ 604
Query: 43 AGISGFVKGLWGWG 56
GISG V G W WG
Sbjct: 605 QGISGMVSG-WFWG 617
>gi|453086921|gb|EMF14962.1| hypothetical protein SEPMUDRAFT_146970 [Mycosphaerella populorum
SO2202]
Length = 634
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
M+P+P KPLF D+A N +E+P + + V + A GS + KG + +G
Sbjct: 578 MEPVPVKPLFLDVAFNYIEYPGRKAEAVVAEQTPALNGSSNESAPQPQKKGWFSFG 633
>gi|167537694|ref|XP_001750515.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771055|gb|EDQ84729.1| predicted protein [Monosiga brevicollis MX1]
Length = 597
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAA 35
MQPI KPL FDLA + ++PSL +L+ K A+
Sbjct: 545 MQPIRCKPLVFDLAIDYRQYPSLAHRLETKATAAS 579
>gi|341882940|gb|EGT38875.1| hypothetical protein CAEBREN_31091 [Caenorhabditis brenneri]
Length = 600
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 21/74 (28%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKLD---------VKIKPAAGGGSG------QP----- 42
P+P KP+FFDLA P++ ++L+ K A GG S QP
Sbjct: 526 PMPNKPIFFDLAIFHNTMPNVNERLEKLQKDRDGQSPKKTAKGGASASSKTSDQPQGEGQ 585
Query: 43 AGISGFVKGLWGWG 56
GISG V G W WG
Sbjct: 586 QGISGMVSG-WFWG 598
>gi|302761700|ref|XP_002964272.1| hypothetical protein SELMODRAFT_81908 [Selaginella moellendorffii]
gi|300168001|gb|EFJ34605.1| hypothetical protein SELMODRAFT_81908 [Selaginella moellendorffii]
Length = 550
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 15/54 (27%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
+ +P +P+F D A N +EFPSLE +L K K + G WGW
Sbjct: 512 KAVPCRPIFLDTAINSIEFPSLEARLKEKKKG---------------LFGRWGW 550
>gi|302815713|ref|XP_002989537.1| hypothetical protein SELMODRAFT_160198 [Selaginella moellendorffii]
gi|300142715|gb|EFJ09413.1| hypothetical protein SELMODRAFT_160198 [Selaginella moellendorffii]
Length = 541
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 15/54 (27%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
+ +P +P+F D A N +EFPSLE +L K K + G WGW
Sbjct: 503 KAVPCRPIFLDTAINSIEFPSLEARLKEKKKG---------------LFGRWGW 541
>gi|313222420|emb|CBY39344.1| unnamed protein product [Oikopleura dioica]
Length = 555
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 1 MQPIPAKPLFFDLAQNQL-EFPSLEDKLDVKIKPAAGGGSG 40
++PIPAK FD+A +++ FP+LEDK V+ K AAG G
Sbjct: 503 LKPIPAKATLFDIAGDKVFAFPNLEDK--VEKKQAAGDAKG 541
>gi|313231644|emb|CBY08757.1| unnamed protein product [Oikopleura dioica]
Length = 555
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 1 MQPIPAKPLFFDLAQNQL-EFPSLEDKLDVKIKPAAGGGSG 40
++PIPAK FD+A +++ FP+LEDK V+ K AAG G
Sbjct: 503 LKPIPAKATLFDIAGDKVFAFPNLEDK--VEKKQAAGDSKG 541
>gi|226287566|gb|EEH43079.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 625
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLE----DKLDVKIKPAAGGGSGQPAGISGFVKGLWGWG 56
MQPIP KPL+ DLA N +++P D +K A G A KG +G+G
Sbjct: 565 MQPIPVKPLYLDLAWNYIDYPRAAGRGGDGTGTAVKAEAAGQVPVQAAKGEGRKGWFGFG 624
>gi|406866754|gb|EKD19793.1| signal recognition particle protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 617
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLE 24
++PIP KPLFFD A N +E+P E
Sbjct: 559 LEPIPVKPLFFDAAWNYIEYPGRE 582
>gi|295674289|ref|XP_002797690.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280340|gb|EEH35906.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 620
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 15/64 (23%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFV-------KGLW 53
MQPIP KPLF DLA N +++P + G G+ A ++G V +G
Sbjct: 562 MQPIPVKPLFLDLAWNYIDYPRATGR--------GGDGTAVEAVVAGQVPVQAAKGEGRK 613
Query: 54 GWGG 57
GW G
Sbjct: 614 GWFG 617
>gi|258565667|ref|XP_002583578.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907279|gb|EEP81680.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 615
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
+QP+P KPLF DLA N +E+P
Sbjct: 562 LQPVPVKPLFLDLAWNYIEYP 582
>gi|378734264|gb|EHY60723.1| signal recognition particle, subunit SRP68 [Exophiala dermatitidis
NIH/UT8656]
Length = 645
Score = 37.4 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPA 43
++P+P KPLFFD+A N + +PS + + + A G GQ A
Sbjct: 582 LRPVPVKPLFFDIAFNYIVYPSQKGSRSEEAETANGRIGGQAA 624
>gi|301099919|ref|XP_002899050.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
gi|262104362|gb|EEY62414.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
Length = 602
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLED--KLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
+ +P KPL FD+A N+LEFP L + K D + A S + G G +GW
Sbjct: 550 RAVPCKPLLFDVAFNELEFPDLTERTKTDAEKAAEAAAASNETGG------GFFGW 599
>gi|119496986|ref|XP_001265264.1| signal recognition particle, putative [Neosartorya fischeri NRRL
181]
gi|119413426|gb|EAW23367.1| signal recognition particle, putative [Neosartorya fischeri NRRL
181]
Length = 611
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
MQPIP KPLF D+A N +++P
Sbjct: 558 MQPIPVKPLFLDVAWNYIDYP 578
>gi|121702987|ref|XP_001269758.1| signal recognition particle, putative [Aspergillus clavatus NRRL 1]
gi|119397901|gb|EAW08332.1| signal recognition particle, putative [Aspergillus clavatus NRRL 1]
Length = 611
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
MQPIP KPLF D+A N +++P
Sbjct: 558 MQPIPVKPLFLDVAWNYIDYP 578
>gi|119189929|ref|XP_001245571.1| hypothetical protein CIMG_05012 [Coccidioides immitis RS]
gi|392868474|gb|EAS34266.2| signal recognition particle [Coccidioides immitis RS]
Length = 618
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
+QPIP KPLFFD+A N +++P
Sbjct: 565 IQPIPVKPLFFDVAWNYIDYP 585
>gi|17561446|ref|NP_506083.1| Protein F55C5.8 [Caenorhabditis elegans]
gi|12230634|sp|Q20822.2|SRP68_CAEEL RecName: Full=Probable signal recognition particle 68 kDa protein;
Short=SRP68
gi|3947567|emb|CAB01573.1| Protein F55C5.8 [Caenorhabditis elegans]
Length = 622
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 3 PIPAKPLFFDLAQNQLEFPSLEDKLD 28
P+P KP+FFDLA L P+++D+L+
Sbjct: 545 PMPNKPIFFDLANFHLTMPNVDDRLE 570
>gi|425772809|gb|EKV11196.1| Signal recognition particle, putative [Penicillium digitatum PHI26]
gi|425782040|gb|EKV19971.1| Signal recognition particle, putative [Penicillium digitatum Pd1]
Length = 648
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
MQPIP KPLF D+A N +++P
Sbjct: 591 MQPIPVKPLFLDVAWNYIDYP 611
>gi|320032913|gb|EFW14863.1| signal recognition particle [Coccidioides posadasii str. Silveira]
Length = 618
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
+QPIP KPLFFD+A N +++P
Sbjct: 565 IQPIPVKPLFFDVAWNYIDYP 585
>gi|303322703|ref|XP_003071343.1| hypothetical protein CPC735_068800 [Coccidioides posadasii C735
delta SOWgp]
gi|240111045|gb|EER29198.1| hypothetical protein CPC735_068800 [Coccidioides posadasii C735
delta SOWgp]
Length = 618
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
+QPIP KPLFFD+A N +++P
Sbjct: 565 IQPIPVKPLFFDVAWNYIDYP 585
>gi|358372158|dbj|GAA88763.1| signal recognition particle [Aspergillus kawachii IFO 4308]
Length = 610
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
MQPIP KPLF D+A N +++P
Sbjct: 557 MQPIPVKPLFLDVAWNYIDYP 577
>gi|255940768|ref|XP_002561153.1| Pc16g08320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585776|emb|CAP93502.1| Pc16g08320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 611
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
MQPIP KPLF D+A N +++P
Sbjct: 554 MQPIPVKPLFLDVAWNYIDYP 574
>gi|401407248|ref|XP_003883073.1| putative signal recognition particle [Neospora caninum Liverpool]
gi|325117489|emb|CBZ53041.1| putative signal recognition particle [Neospora caninum Liverpool]
Length = 702
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWG 54
++P+P KP+ FDLA P L+ + + G G+ A + GFVK L+G
Sbjct: 657 LEPLPCKPVLFDLALASYAPPQLKARTE---------GGGKRAALRGFVKSLFG 701
>gi|313243742|emb|CBY42362.1| unnamed protein product [Oikopleura dioica]
Length = 250
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 1 MQPIPAKPLFFDLAQNQL-EFPSLEDKLDVKIKPAAGGGSG 40
++PIPAK FD+A +++ FP+LEDK V+ K AAG G
Sbjct: 198 LKPIPAKATLFDIAGDKVFAFPNLEDK--VEKKQAAGDSKG 236
>gi|313246885|emb|CBY35740.1| unnamed protein product [Oikopleura dioica]
Length = 257
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 1 MQPIPAKPLFFDLAQNQL-EFPSLEDKLDVKIKPAAGGGSG 40
++PIPAK FD+A +++ FP+LEDK V+ K AAG G
Sbjct: 205 LKPIPAKATLFDIAGDKVFAFPNLEDK--VEKKQAAGDSKG 243
>gi|367045476|ref|XP_003653118.1| hypothetical protein THITE_2115184 [Thielavia terrestris NRRL 8126]
gi|347000380|gb|AEO66782.1| hypothetical protein THITE_2115184 [Thielavia terrestris NRRL 8126]
Length = 630
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSL 23
++PIP KPLF D+A N +E+P L
Sbjct: 568 LEPIPVKPLFLDVAWNYIEYPDL 590
>gi|440636571|gb|ELR06490.1| hypothetical protein GMDG_08014 [Geomyces destructans 20631-21]
Length = 617
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIK----PAAGGGSGQPAGISGFVKGLWGWG 56
++ +P KPLFFD+A N +E+P + ++ P++ G Q A KG +G+G
Sbjct: 561 LEAVPVKPLFFDVAWNYIEYPGRSPQATAQVAEEEIPSSRGEERQEAK-----KGWFGFG 615
>gi|348674313|gb|EGZ14132.1| hypothetical protein PHYSODRAFT_352029 [Phytophthora sojae]
Length = 621
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDK 26
+ +P KPL FD+A N+LEFP L ++
Sbjct: 567 RAVPCKPLLFDVAFNELEFPDLTER 591
>gi|255540061|ref|XP_002511095.1| Signal recognition particle 68 kDa protein, putative [Ricinus
communis]
gi|223550210|gb|EEF51697.1| Signal recognition particle 68 kDa protein, putative [Ricinus
communis]
Length = 594
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 14/52 (26%)
Query: 2 QPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLW 53
Q IP P+ DLA N ++FPSLE+++ K GF+ LW
Sbjct: 556 QTIPRNPIILDLAYNYIDFPSLENRMKKDKK--------------GFISRLW 593
>gi|449300476|gb|EMC96488.1| hypothetical protein BAUCODRAFT_69954 [Baudoinia compniacensis UAMH
10762]
Length = 644
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
+QP+P KPLF D+A N +E+P
Sbjct: 584 IQPVPVKPLFLDVAWNYIEYP 604
>gi|317144358|ref|XP_001820071.2| signal recognition particle [Aspergillus oryzae RIB40]
Length = 650
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
MQP+P KPLF D+A N +++P
Sbjct: 597 MQPVPVKPLFLDVAWNYIDYP 617
>gi|83767930|dbj|BAE58069.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 613
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
MQP+P KPLF D+A N +++P
Sbjct: 558 MQPVPVKPLFLDVAWNYIDYP 578
>gi|238486268|ref|XP_002374372.1| signal recognition particle, putative [Aspergillus flavus NRRL3357]
gi|220699251|gb|EED55590.1| signal recognition particle, putative [Aspergillus flavus NRRL3357]
gi|391873647|gb|EIT82667.1| signal recognition particle, subunit Srp68 [Aspergillus oryzae
3.042]
Length = 611
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 1 MQPIPAKPLFFDLAQNQLEFP 21
MQP+P KPLF D+A N +++P
Sbjct: 558 MQPVPVKPLFLDVAWNYIDYP 578
>gi|325185607|emb|CCA20089.1| signal recognition particle putative [Albugo laibachii Nc14]
Length = 610
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFVKGLWGW 55
++ +P KPL FD+A N+L FP + ++ K+ + +G GF+ GW
Sbjct: 558 LEAVPCKPLLFDIAHNELAFPDIIER--TKLPEERRSENNSKSGSVGFL----GW 606
>gi|115390979|ref|XP_001212994.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193918|gb|EAU35618.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 612
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 11/41 (26%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQ 41
MQP+P KPLF D+A N +++P A GSGQ
Sbjct: 559 MQPVPVKPLFLDVAWNYIDYPR-----------EAATGSGQ 588
>gi|225557642|gb|EEH05928.1| signal recognition particle 68 [Ajellomyces capsulatus G186AR]
Length = 643
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPAGISGFV 49
M+P+P KPLF D+A N +++P + K GSG AG+ V
Sbjct: 576 MEPVPVKPLFLDVAFNYIDYPRGSN------KGGLATGSGASAGMDADV 618
>gi|154275112|ref|XP_001538407.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414847|gb|EDN10209.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 645
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPSLEDKLDVKIKPAAGGGSGQPA 43
++P+P KPLF D+A N +++P +K + A G G+G A
Sbjct: 580 IEPVPVKPLFLDVAFNYIDYPRRSNKGGL----ATGSGAGMDA 618
>gi|348674308|gb|EGZ14127.1| hypothetical protein PHYSODRAFT_335802 [Phytophthora sojae]
Length = 120
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 4 IPAKPLFFDLAQNQLEFPSLEDK 26
+P KPL FD+A N+LEFP L ++
Sbjct: 68 VPCKPLLFDVAFNELEFPDLTER 90
>gi|171690632|ref|XP_001910241.1| hypothetical protein [Podospora anserina S mat+]
gi|170945264|emb|CAP71375.1| unnamed protein product [Podospora anserina S mat+]
Length = 624
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 1 MQPIPAKPLFFDLAQNQLEFPS 22
++PIP KPLF D+A N +E+P+
Sbjct: 560 LEPIPVKPLFLDVAWNYIEYPA 581
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.141 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,124,580,187
Number of Sequences: 23463169
Number of extensions: 41732196
Number of successful extensions: 105881
Number of sequences better than 100.0: 223
Number of HSP's better than 100.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 105547
Number of HSP's gapped (non-prelim): 234
length of query: 60
length of database: 8,064,228,071
effective HSP length: 33
effective length of query: 27
effective length of database: 7,289,943,494
effective search space: 196828474338
effective search space used: 196828474338
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)