Query psy15905
Match_columns 60
No_of_seqs 100 out of 147
Neff 4.5
Searched_HMMs 13730
Date Sat Aug 17 00:37:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15905.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15905hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oeyj_ d.15.2.2 (J:) Neutroph 56.1 1.1 8E-05 26.4 -0.0 16 11-26 47-62 (105)
2 d1r7aa2 c.1.8.1 (A:1-434) Sucr 32.2 6.7 0.00049 23.2 0.8 11 9-19 80-90 (434)
3 d1ua7a2 c.1.8.1 (A:4-347) Bact 28.5 12 0.00085 23.5 1.6 13 9-21 91-103 (344)
4 d1ltqa1 c.108.1.9 (A:153-301) 27.4 10 0.00073 20.3 1.0 18 5-22 4-23 (149)
5 d2aaaa2 c.1.8.1 (A:1-381) Fung 26.5 11 0.00083 23.6 1.2 14 9-22 114-127 (381)
6 d1qoia_ b.62.1.1 (A:) Cyclophi 24.5 14 0.00098 21.3 1.2 11 5-15 4-15 (173)
7 d1g94a2 c.1.8.1 (A:1-354) Bact 23.1 12 0.0009 22.9 0.9 12 9-20 81-92 (354)
8 d1h3ga3 c.1.8.1 (A:96-517) Cyc 21.6 16 0.0011 22.7 1.2 12 9-20 120-131 (422)
9 d1ud2a2 c.1.8.1 (A:1-390) Bact 20.7 15 0.0011 21.7 0.9 11 9-19 97-107 (390)
10 d1gxya_ d.166.1.3 (A:) Eukaryo 20.0 15 0.0011 22.9 0.8 21 8-28 1-23 (223)
No 1
>d1oeyj_ d.15.2.2 (J:) Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.15 E-value=1.1 Score=26.45 Aligned_cols=16 Identities=19% Similarity=-0.047 Sum_probs=13.2
Q ss_pred eeeccccccCCCCcch
Q psy15905 11 FDLAQNQLEFPSLEDK 26 (60)
Q Consensus 11 fDlA~Nyi~yP~~~~~ 26 (60)
.|||+||+++-..=-|
T Consensus 47 ~dIaLNYrD~eGDLIR 62 (105)
T d1oeyj_ 47 EDIALNYRDAEGDLVR 62 (105)
T ss_dssp SSEEEEEECTTSCEEE
T ss_pred ceeEeeeecCCCCEEE
Confidence 5999999999876555
No 2
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]}
Probab=32.18 E-value=6.7 Score=23.25 Aligned_cols=11 Identities=18% Similarity=0.416 Sum_probs=10.0
Q ss_pred eeeeecccccc
Q psy15905 9 LFFDLAQNQLE 19 (60)
Q Consensus 9 iffDlA~Nyi~ 19 (60)
|++|+.+||..
T Consensus 80 VIlDvV~NHt~ 90 (434)
T d1r7aa2 80 IMVDAIVNHMS 90 (434)
T ss_dssp EEEEEECSEEE
T ss_pred eeEEecccccc
Confidence 79999999985
No 3
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]}
Probab=28.46 E-value=12 Score=23.49 Aligned_cols=13 Identities=23% Similarity=0.373 Sum_probs=10.9
Q ss_pred eeeeeccccccCC
Q psy15905 9 LFFDLAQNQLEFP 21 (60)
Q Consensus 9 iffDlA~Nyi~yP 21 (60)
|++|+.+||....
T Consensus 91 VilD~V~NH~~~~ 103 (344)
T d1ua7a2 91 VIVDAVINHTTFD 103 (344)
T ss_dssp EEEEECCSBCCSC
T ss_pred EeeccceeeecCC
Confidence 7899999998643
No 4
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=27.36 E-value=10 Score=20.29 Aligned_cols=18 Identities=28% Similarity=0.628 Sum_probs=11.7
Q ss_pred CCCc--eeeeeccccccCCC
Q psy15905 5 PAKP--LFFDLAQNQLEFPS 22 (60)
Q Consensus 5 p~KP--iffDlA~Nyi~yP~ 22 (60)
|.|| |+||+=-.=++...
T Consensus 4 ~~kpk~vifDiDgTL~~~~~ 23 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNG 23 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSS
T ss_pred CCCCcEEEEEcCCCcEeCCC
Confidence 5566 99998765554433
No 5
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]}
Probab=26.51 E-value=11 Score=23.60 Aligned_cols=14 Identities=14% Similarity=0.555 Sum_probs=11.6
Q ss_pred eeeeeccccccCCC
Q psy15905 9 LFFDLAQNQLEFPS 22 (60)
Q Consensus 9 iffDlA~Nyi~yP~ 22 (60)
|++|+.+||+.+-+
T Consensus 114 VilD~V~NH~~~~~ 127 (381)
T d2aaaa2 114 LMVDVVPDHMGYAG 127 (381)
T ss_dssp EEEEECCSBCCBSS
T ss_pred cccccccccccccc
Confidence 78999999997643
No 6
>d1qoia_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Human (Homo sapiens), U4/U6 snRNP-specific cyclophilin snucyp-20 [TaxId: 9606]}
Probab=24.55 E-value=14 Score=21.28 Aligned_cols=11 Identities=45% Similarity=1.138 Sum_probs=7.4
Q ss_pred CCCc-eeeeecc
Q psy15905 5 PAKP-LFFDLAQ 15 (60)
Q Consensus 5 p~KP-iffDlA~ 15 (60)
|..| +|||++.
T Consensus 4 ~~np~v~~di~i 15 (173)
T d1qoia_ 4 PVNPVVFFDVSI 15 (173)
T ss_dssp CCCCEEEEEEEE
T ss_pred CCCCEEEEEEEE
Confidence 4556 7788874
No 7
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=23.07 E-value=12 Score=22.92 Aligned_cols=12 Identities=17% Similarity=0.384 Sum_probs=10.3
Q ss_pred eeeeeccccccC
Q psy15905 9 LFFDLAQNQLEF 20 (60)
Q Consensus 9 iffDlA~Nyi~y 20 (60)
|++|+.+||..-
T Consensus 81 VilDvV~NH~~~ 92 (354)
T d1g94a2 81 IYVDTLINHMAA 92 (354)
T ss_dssp EEEEEECSEECS
T ss_pred eEEEeecccccc
Confidence 789999999853
No 8
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]}
Probab=21.64 E-value=16 Score=22.67 Aligned_cols=12 Identities=17% Similarity=0.230 Sum_probs=10.3
Q ss_pred eeeeeccccccC
Q psy15905 9 LFFDLAQNQLEF 20 (60)
Q Consensus 9 iffDlA~Nyi~y 20 (60)
|++|+..||+.-
T Consensus 120 VilD~V~NH~~~ 131 (422)
T d1h3ga3 120 LIQDVVLSHIGK 131 (422)
T ss_dssp EEEEECCSBCCT
T ss_pred ccccCccccccc
Confidence 789999999863
No 9
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=20.66 E-value=15 Score=21.65 Aligned_cols=11 Identities=18% Similarity=0.250 Sum_probs=9.9
Q ss_pred eeeeecccccc
Q psy15905 9 LFFDLAQNQLE 19 (60)
Q Consensus 9 iffDlA~Nyi~ 19 (60)
|++|+.+||..
T Consensus 97 VilDvV~NHt~ 107 (390)
T d1ud2a2 97 VYGDVVMNHKM 107 (390)
T ss_dssp EEEEECCSEEC
T ss_pred eEEEEcccccc
Confidence 78999999986
No 10
>d1gxya_ d.166.1.3 (A:) Eukaryotic mono-ADP-ribosyltransferase ART2.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=19.97 E-value=15 Score=22.94 Aligned_cols=21 Identities=29% Similarity=0.645 Sum_probs=15.1
Q ss_pred ceeeeeccccc--cCCCCcchhh
Q psy15905 8 PLFFDLAQNQL--EFPSLEDKLD 28 (60)
Q Consensus 8 PiffDlA~Nyi--~yP~~~~~~~ 28 (60)
|+.+|+|-|-. +|-.=++.++
T Consensus 1 ~~~ldma~~sfDDqY~gC~~~m~ 23 (223)
T d1gxya_ 1 PLMLDTAPNAFDDQYEGCVNKME 23 (223)
T ss_dssp CEECCCCTTSCCCCCTTCHHHHH
T ss_pred CcCcCCCCCcccccccchHHHHH
Confidence 78899999988 4666555543
Done!