RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15905
         (60 letters)



>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain
           {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
          Length = 690

 Score = 23.4 bits (50), Expect = 2.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 4   IPAKPLFFDLAQNQLEFPSLED 25
            PA    FDL    +EF S +D
Sbjct: 118 QPAFESAFDLKSTPIEFHSFQD 139


>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow
           (Bos taurus) [TaxId: 9913]}
          Length = 271

 Score = 23.0 bits (49), Expect = 2.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 45  ISGFVKGLWGWGG 57
           I+GF    WG GG
Sbjct: 173 INGFPNNYWGAGG 185


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.141    0.448 

Gapped
Lambda     K      H
   0.267   0.0582    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 239,375
Number of extensions: 8637
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 2
Length of query: 60
Length of database: 2,407,596
Length adjustment: 30
Effective length of query: 30
Effective length of database: 1,995,696
Effective search space: 59870880
Effective search space used: 59870880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.2 bits)