BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15908
(354 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P51798|CLCN7_HUMAN H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1
SV=2
Length = 805
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 4/157 (2%)
Query: 194 PGASNIISSKFESLDYDLMENYLTQSETWKSYNFILYK--DFARWVIFFLIGVLTACIGI 251
P ++S K+ESLDYD EN L E + N ++ + RWVI LIG+LT +
Sbjct: 84 PHNEKLLSLKYESLDYDNSENQLFLEEE-RRINHTAFRTVEIKRWVICALIGILTGLVAC 142
Query: 252 FIDISIEFIAVFKYSTLKRYLDN-SGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVAL 310
FIDI +E +A KY +K +D + G+ L +W N VL+GS++V ++EPVA
Sbjct: 143 FIDIVVENLAGLKYRVIKGNIDKFTEKGGLSFSLLLWATLNAAFVLVGSVIVAFIEPVAA 202
Query: 311 GSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAASRV 347
GSGIPQ+KC+LNG+K+P +VR+KTLV+K + + S V
Sbjct: 203 GSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVV 239
>sp|O70496|CLCN7_MOUSE H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1
SV=1
Length = 803
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 4/157 (2%)
Query: 194 PGASNIISSKFESLDYDLMENYLTQSETWKSYNFILYK--DFARWVIFFLIGVLTACIGI 251
P ++S K+ESLDYD EN L E + N ++ + RWVI LIG+LT +
Sbjct: 82 PHNEKLLSLKYESLDYDNSENQLFLEEE-RRINHTAFRTVEIKRWVICALIGILTGLVAC 140
Query: 252 FIDISIEFIAVFKYSTLKRYLDN-SGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVAL 310
FIDI +E +A KY +K +D + G+ L +W N VL+GS++V ++EPVA
Sbjct: 141 FIDIVVENLAGLKYRVIKDNIDKFTEKGGLSFSLLLWATLNSAFVLVGSVIVAFIEPVAA 200
Query: 311 GSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAASRV 347
GSGIPQ+KC+LNG+K+P +VR+KTLV+K + + S V
Sbjct: 201 GSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVV 237
>sp|P51799|CLCN7_RAT H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7
PE=2 SV=1
Length = 803
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 4/157 (2%)
Query: 194 PGASNIISSKFESLDYDLMENYLTQSETWKSYNFILYK--DFARWVIFFLIGVLTACIGI 251
P ++S K+ESLDYD EN L E + N ++ + RWVI LIG+LT +
Sbjct: 82 PHNEKLLSLKYESLDYDNSENQLFLEEE-RRINHTAFRTVEIKRWVICALIGILTGLVAC 140
Query: 252 FIDISIEFIAVFKYSTLKRYLDN-SGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVAL 310
FIDI +E +A KY +K +D + G+ L +W N VL+GS++V ++EPVA
Sbjct: 141 FIDIVVENLAGLKYRVIKDNIDKFTEKGGLSFSLLLWATLNSAFVLVGSVIVAFIEPVAA 200
Query: 311 GSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAASRV 347
GSGIPQ+KC+LNG+K+P +VR+KTLV+K + + S V
Sbjct: 201 GSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVV 237
>sp|Q4PKH3|CLCN7_BOVIN H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1
Length = 809
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 98/157 (62%), Gaps = 4/157 (2%)
Query: 194 PGASNIISSKFESLDYDLMENYLTQSETWKSYNFILYK--DFARWVIFFLIGVLTACIGI 251
P ++S K+ESLDYD EN L E + N ++ + RWVI ++G+LT +
Sbjct: 88 PHNEKLLSLKYESLDYDNSENQLFLEEE-RRINHTAFRTVEIKRWVICAMVGILTGLVAC 146
Query: 252 FIDISIEFIAVFKYSTLKRYLDN-SGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVAL 310
FIDI +E +A KY +K +D + + G+ L +W N VL+GS +V ++EPVA
Sbjct: 147 FIDIVVEKLAGLKYRLVKDNIDRFTEHGGLSFSLLLWAALNAAFVLLGSTIVAFIEPVAA 206
Query: 311 GSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAASRV 347
GSGIPQ+KC+LNG+K+P +VR+KTLV+K + + S V
Sbjct: 207 GSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVV 243
>sp|O35454|CLCN6_MOUSE Chloride transport protein 6 OS=Mus musculus GN=Clcn6 PE=1 SV=1
Length = 870
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 5/138 (3%)
Query: 204 FESLDYD--LMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIA 261
+ESLDYD + + YL ET + Y+ +W++ F IGV T +G+F+D S+
Sbjct: 48 YESLDYDRCINDPYLEVLETMDNKKGRRYEA-VKWMVVFAIGVCTGLVGLFVDFSVRLFT 106
Query: 262 VFKYSTLKRYLDNSGNTG-MLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCY 320
K+ ++ ++ G + + L LGFN+ V + SLLV+ +EPVA GSGIP++KCY
Sbjct: 107 QLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVL-IEPVAAGSGIPEIKCY 165
Query: 321 LNGIKMPRLVRIKTLVVK 338
LNG+K+P +VR++TL+ K
Sbjct: 166 LNGVKVPGIVRLRTLLCK 183
>sp|P51797|CLCN6_HUMAN Chloride transport protein 6 OS=Homo sapiens GN=CLCN6 PE=1 SV=2
Length = 869
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
Query: 204 FESLDYD--LMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIA 261
+ESLDYD + + YL ET + Y+ +W++ F IGV T +G+F+D +
Sbjct: 48 YESLDYDRCINDPYLEVLETMDNKKGRRYEA-VKWMVVFAIGVCTGLVGLFVDFFVRLFT 106
Query: 262 VFKYSTLKRYLDNSGNTG-MLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCY 320
K+ ++ ++ G + + L LGFN+ V + SLLV+ +EPVA GSGIP+VKCY
Sbjct: 107 QLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVL-IEPVAAGSGIPEVKCY 165
Query: 321 LNGIKMPRLVRIKTLVVK 338
LNG+K+P +VR++TL+ K
Sbjct: 166 LNGVKVPGIVRLRTLLCK 183
>sp|Q9TT16|CLCN6_RABIT Chloride transport protein 6 OS=Oryctolagus cuniculus GN=CLCN6 PE=2
SV=1
Length = 869
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 84/138 (60%), Gaps = 5/138 (3%)
Query: 204 FESLDYD--LMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIA 261
+ESLDYD + + YL ET Y + +W + F IGV T +G+F+D ++
Sbjct: 48 YESLDYDRCINDPYLEVLETMDHKKGRWY-EVVKWTVVFAIGVCTGLVGLFVDFFVQLFT 106
Query: 262 VFKYSTLKRYLDNSGNTG-MLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCY 320
K+ ++ ++ G + + L LGFN+ V + SLLV+ +EPVA GSGIP++KCY
Sbjct: 107 QLKFGVVEASVEECSQKGCLALSLLELLGFNLTFVFLASLLVL-IEPVAAGSGIPEIKCY 165
Query: 321 LNGIKMPRLVRIKTLVVK 338
LNG+K+P +VR++TL+ K
Sbjct: 166 LNGVKVPGIVRLRTLLCK 183
>sp|Q54AX6|CLCA_DICDI Chloride channel protein A OS=Dictyostelium discoideum GN=clcA PE=2
SV=1
Length = 863
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 193 FPGASNIISSKFESLDYDLMENYLTQSETWKS--YNFILYKDFARWVIFFLIGVLTACIG 250
F A + +KFESLD+ +++N + + ++ N +L K F +W+I F+IGVL
Sbjct: 84 FTEADKLKMTKFESLDFPIIDNQIYREYIRRTSKLNHML-KTFGKWIICFMIGVLVGITA 142
Query: 251 IFIDISIEFIAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVAL 310
+ S+EF+ FK+ +YL++ + V+ NI+ + SL+++ V +A
Sbjct: 143 YLVKQSVEFVNEFKFDQSGKYLEDERK---FIAFLVYYSINILFGVSASLVIIPVGQIAS 199
Query: 311 GSGIPQVKCYLNGIKMPRLVRIKTLVVK 338
GSGIP+VK YLNGI++P+ + +KTLV K
Sbjct: 200 GSGIPEVKGYLNGIRIPQSMNVKTLVGK 227
>sp|P92941|CLCA_ARATH Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A
PE=1 SV=2
Length = 775
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 14/143 (9%)
Query: 202 SKFESLDYDLMENYLTQSETWKS------YNFILYKDFARWVIFFLIGVLTACIGIFIDI 255
S ESLDY++ EN L + + W+S + +I F +W + L+G+ T I I++
Sbjct: 52 SHIESLDYEINENDLFKHD-WRSRSKAQVFQYI----FLKWTLACLVGLFTGLIATLINL 106
Query: 256 SIEFIAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIP 315
++E IA +K + Y+ L V+ G N+ L+ ++LVVY P A G GIP
Sbjct: 107 AVENIAGYKLLAVGYYI---AQDRFWTGLMVFTGANLGLTLVATVLVVYFAPTAAGPGIP 163
Query: 316 QVKCYLNGIKMPRLVRIKTLVVK 338
++K YLNGI P + T++VK
Sbjct: 164 EIKAYLNGIDTPNMFGFTTMMVK 186
>sp|Q86AZ6|CLCB_DICDI Chloride channel protein B OS=Dictyostelium discoideum GN=clcB PE=3
SV=1
Length = 815
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 83/141 (58%), Gaps = 5/141 (3%)
Query: 200 ISSKFESLDYDLMENYLTQSETW--KSYNFILYKDFARWVIFFLIGVLTACIGIFIDISI 257
+ S FESLD++ ++N + + T+ K Y IL K +WVI LIGV+ + + S+
Sbjct: 63 LMSHFESLDFNAIDNIIHRKYTFEKKKYQKIL-KTLGKWVICTLIGVVVGLVCYCLKESV 121
Query: 258 EFIAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQV 317
+ + K + +K++ S + + +P V+LGFN+ LI LLV P++ SG+P+V
Sbjct: 122 DQLQSLKLTQVKKFY--STESTIFIPFLVYLGFNLCYGLISGLLVCIFGPMSSSSGLPEV 179
Query: 318 KCYLNGIKMPRLVRIKTLVVK 338
K YLNGI++ + +KT++ K
Sbjct: 180 KGYLNGIRISKAFNLKTVLGK 200
>sp|P92942|CLCB_ARATH Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B
PE=1 SV=1
Length = 780
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 202 SKFESLDYDLMENYLTQSETWK--SYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEF 259
S ESLDY++ EN L + + W+ S +L F +W + L+G+ T I I++++E
Sbjct: 51 SHIESLDYEINENDLFKHD-WRKRSKAQVLQYVFLKWTLACLVGLFTGLIATLINLAVEN 109
Query: 260 IAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKC 319
IA +K + +L + L V +G N+ L+ S+L V P A G GIP++K
Sbjct: 110 IAGYKLLAVGHFLTQER---YVTGLMVLVGANLGLTLVASVLCVCFAPTAAGPGIPEIKA 166
Query: 320 YLNGIKMPRLVRIKTLVVK 338
YLNG+ P + T++VK
Sbjct: 167 YLNGVDTPNMFGATTMIVK 185
>sp|P92943|CLCD_ARATH Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D
PE=1 SV=2
Length = 792
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 206 SLDYDLMENYLTQSE-TWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIAVFK 264
SLDY+++ENY + E + ++ Y +W LIG+ T +FI++S+E A +K
Sbjct: 46 SLDYEVIENYAYREEQAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWK 105
Query: 265 YSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGI 324
++ + S G +V L + N+V V + ++ P A GSGIP++K YLNGI
Sbjct: 106 FALTFAIIQKSYFAGFIVYLLI----NLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGI 161
Query: 325 KMPRLVRIKTLVVK 338
+P + +TL+ K
Sbjct: 162 DIPGTLLFRTLIGK 175
>sp|P60300|CLCG_ARATH Putative chloride channel-like protein CLC-g OS=Arabidopsis
thaliana GN=CBSCLC6 PE=2 SV=2
Length = 765
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 205 ESLDYDLMEN-YLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIAVF 263
ESLDY++ EN + Q +S I F +W++ F IG++ + IG ++++E +A
Sbjct: 39 ESLDYEIAENDFFKQDWRGRSKVEIFQYVFMKWLLCFCIGIIVSLIGFANNLAVENLAGV 98
Query: 264 KYSTLKRYLDNSGNTGMLVPLAVWLGF------NIVPVLIGSLLVVYVEPVALGSGIPQV 317
K+ + M++ +GF N++ L S++ +V P A GSGIP+V
Sbjct: 99 KFVV---------TSNMMIAGRFAMGFVVFSVTNLILTLFASVITAFVAPAAAGSGIPEV 149
Query: 318 KCYLNGIKMPRLVRIKTLVVK 338
K YLNG+ P + ++TL++K
Sbjct: 150 KAYLNGVDAPEIFSLRTLIIK 170
>sp|Q1ZXJ0|CLCD_DICDI Chloride channel protein D OS=Dictyostelium discoideum GN=clcD PE=3
SV=1
Length = 1000
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 203 KFESLDYDLMENYLTQSETWKSYNFILY-KDFARWVIFFLIGVLTACIGIFIDISIEFIA 261
K+E LDY + N ++E +K+++ + + RW++ +G+ I F + I
Sbjct: 222 KYECLDYVTIYNKAHRNELYKNFSKLASDHEVLRWIVSLFMGIFIGVIAYFSHACVSNIT 281
Query: 262 VFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYL 321
+K+ ++ L+ + + + N + SLL VY EP A GSGIP+VK YL
Sbjct: 282 KYKFKFVEAVLE----LDLFLAFLTYFLLNTLLATCSSLLAVYYEPTAAGSGIPEVKGYL 337
Query: 322 NGIKMPRLVRIKTLVVK 338
NG K+P +++KTL K
Sbjct: 338 NGTKIPHTLKMKTLWTK 354
>sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C
PE=1 SV=1
Length = 779
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 205 ESLDYDLMENYLTQSETWKSYNFI--LYKDFARWVIFFLIGVLTACIGIFIDISIEFIAV 262
ESLDY++ EN + + W+S I L F +W + FLIG+ T +G ++ +E IA
Sbjct: 64 ESLDYEIFENDFFKQD-WRSRKKIEILQYTFLKWALAFLIGLATGLVGFLNNLGVENIAG 122
Query: 263 FKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLN 322
FK + + A G N++ + L ++ P A GSGIP+VK YLN
Sbjct: 123 FKLLLIGNLMLKEKYFQAFFAFA---GCNLILATAAASLCAFIAPAAAGSGIPEVKAYLN 179
Query: 323 GIKMPRLVRIKTLVVK 338
GI ++ TL VK
Sbjct: 180 GIDAYSILAPSTLFVK 195
>sp|Q75JF3|CLCC_DICDI Chloride channel protein C OS=Dictyostelium discoideum GN=clcC PE=3
SV=1
Length = 757
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 205 ESLDYDLMENYLTQSETWKSYNFI-LYKDFARWVIFFLIGVLTACIGIFIDISIEFIAVF 263
+SL++ + +N L + E K+ + L K F +W+I +GV+ CI I + ++ +
Sbjct: 64 QSLNFSVNDNLLQREEYEKTTKGLHLKKTFGKWIICLFLGVIVGCIAYVIKMVVQLLQGL 123
Query: 264 KYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNG 323
K+ Y+ N G G +LG N++ V + L+V+ P+A SGIP+VK LNG
Sbjct: 124 KFHYTNHYVSN-GLQGE--AFLTFLGINLLFVFLSCLMVIVAGPLASSSGIPEVKGILNG 180
Query: 324 IKMPRLVRIKTLVVK 338
+K+ + + L+ K
Sbjct: 181 VKVREALGFRALLGK 195
>sp|Q54LQ4|CLCE_DICDI Chloride channel protein E OS=Dictyostelium discoideum GN=clcE PE=3
SV=1
Length = 994
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 34/151 (22%)
Query: 231 KDFARWV-------IFFL--IGVLTACIGIFIDISIEFIAVFKYSTLKRYLDNSGNTGM- 280
K F W+ + F+ +G+L A +GI D + + TL+ ++ + N+ +
Sbjct: 150 KKFTHWLGKERISTLLFIPTLGILIALMGILCDF-----LLMELGTLRDFVTSRHNSHVI 204
Query: 281 ------------------LVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLN 322
LV V++G+++ LI + ++ P A+GSGIP++K ++
Sbjct: 205 PTDGTTPTPNSSIADKYDLVEGIVFVGYSVFFALISVCCISFISPYAVGSGIPEMKSIMS 264
Query: 323 GIKMPRLVRIKTLVVK-TNRIAASRVCRTCG 352
GI + R++ KTLV K + AS T G
Sbjct: 265 GINLSRVLGFKTLVSKIVGMVCASAAGLTIG 295
>sp|Q9VGH7|CLCN2_DROME Chloride channel protein 2 OS=Drosophila melanogaster GN=ClC-a PE=2
SV=3
Length = 1193
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 236 WVIFFLIGVLTACIGIFIDISIEFIAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPV 295
WV L+G++ A + +D I + + +L + V W+ + +
Sbjct: 172 WVFLALLGIIMALLSFIMDKGISIC-----TNARIWLYRDLTSQPFVQYIAWVSLPVCLI 226
Query: 296 LIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAAS 345
L + V + P ++GSGIP++K L G+++ + KTLV K + A+
Sbjct: 227 LFSAGFVHLIAPQSIGSGIPEMKTILRGVQLKEYLTFKTLVAKVIGLTAT 276
>sp|P35523|CLCN1_HUMAN Chloride channel protein 1 OS=Homo sapiens GN=CLCN1 PE=1 SV=3
Length = 988
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 286 VWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAAS 345
VW+ F +V +L +L + P A+GSGIP++K L G+ + + +K V K + A
Sbjct: 163 VWVTFPLVLILFSALFCHLISPQAVGSGIPEMKTILRGVVLKEYLTMKAFVAKVVALTAG 222
>sp|P37020|GEF1_YEAST Anion/proton exchange transporter GEF1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GEF1 PE=1 SV=2
Length = 779
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 279 GMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPR-LVRIKTLVV 337
G + P +++ +++ LI +LLV YV P+A GSGI ++K +++G + + + TLV+
Sbjct: 153 GHVSPFIIFMLLSVLFALISTLLVKYVAPMATGSGISEIKVWVSGFEYNKEFLGFLTLVI 212
Query: 338 KT 339
K+
Sbjct: 213 KS 214
>sp|Q9R0A1|CLCN2_MOUSE Chloride channel protein 2 OS=Mus musculus GN=Clcn2 PE=2 SV=2
Length = 908
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 269 KRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPR 328
++++ NT +L+ W+ + +V + + + P A+GSGIP++K L G+ +
Sbjct: 127 QQWMSRGLNTNILLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKE 186
Query: 329 LVRIKTLVVK 338
+ +KT V K
Sbjct: 187 YLTLKTFVAK 196
>sp|P51789|CLCN2_RABIT Chloride channel protein 2 OS=Oryctolagus cuniculus GN=CLCN2 PE=2
SV=1
Length = 898
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 269 KRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPR 328
++++ NT +L+ W+ + +V + + + P A+GSGIP++K L G+ +
Sbjct: 122 QQWMSRGLNTNLLLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKE 181
Query: 329 LVRIKTLVVK 338
+ +KT V K
Sbjct: 182 YLTLKTFVAK 191
>sp|Q9WU45|CLCN2_CAVPO Chloride channel protein 2 OS=Cavia porcellus GN=CLCN2 PE=2 SV=1
Length = 902
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 269 KRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPR 328
++++ NT +L+ W+ + +V + + + P A+GSGIP++K L G+ +
Sbjct: 121 QQWMSQGLNTNILLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKE 180
Query: 329 LVRIKTLVVK 338
+ +KT V K
Sbjct: 181 YLTLKTFVAK 190
>sp|P35525|CLCN2_RAT Chloride channel protein 2 OS=Rattus norvegicus GN=Clcn2 PE=2 SV=1
Length = 907
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 269 KRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPR 328
++++ NT +L+ W+ + +V + + + P A+GSGIP++K L G+ +
Sbjct: 125 QQWMSRGLNTNILLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKE 184
Query: 329 LVRIKTLVVK 338
+ +KT V K
Sbjct: 185 YLTLKTFVAK 194
>sp|Q64347|CLCN1_MOUSE Chloride channel protein 1 OS=Mus musculus GN=Clcn1 PE=1 SV=3
Length = 994
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 286 VWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAAS 345
W+ F ++ +L +L + P A+GSGIP++K L G+ + + +K V K + A
Sbjct: 163 AWVTFPLILILFSALFCQLISPQAVGSGIPEMKTILRGVVLKEYLTLKAFVAKVVALTAG 222
>sp|P35524|CLCN1_RAT Chloride channel protein 1 OS=Rattus norvegicus GN=Clcn1 PE=2 SV=1
Length = 994
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 286 VWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAAS 345
W+ F ++ +L +L + P A+GSGIP++K L G+ + + +K V K + A
Sbjct: 163 AWVTFPLILILFSALFCQLISPQAVGSGIPEMKTILRGVVLKEYLTLKAFVAKVVALTAG 222
>sp|P35522|CICH_TORCA Chloride channel protein OS=Torpedo californica PE=1 SV=3
Length = 810
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 276 GNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTL 335
GN G+ VW+ + ++ +L SL V P A+GSGIP++K + G + + ++T
Sbjct: 89 GNLGL--QYLVWVCYPLILILFSSLFCQIVSPQAVGSGIPELKTIIRGAVLHEYLTLRTF 146
Query: 336 VVKT 339
V KT
Sbjct: 147 VAKT 150
>sp|P51788|CLCN2_HUMAN Chloride channel protein 2 OS=Homo sapiens GN=CLCN2 PE=1 SV=2
Length = 898
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 269 KRYLDNSGNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPR 328
++++ NT +L+ W+ + +V + + + P A+GSGIP++K L G+ +
Sbjct: 119 QQWMSRGLNTSILLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKE 178
Query: 329 LVRIKTLVVK 338
+ +KT + K
Sbjct: 179 YLTLKTFIAK 188
>sp|Q9W701|CLCKB_XENLA Chloride channel protein ClC-Kb OS=Xenopus laevis GN=clcnkb PE=1
SV=1
Length = 689
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Query: 226 NFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIAVFKYSTLKRYLDNSGNTGMLVPLA 285
NF L++ W F +GV+ A I +D ++ K R+L +L+
Sbjct: 42 NF-LFRIGDDWYFLFALGVIMALISFTMDFTVS-----KMLNAHRWLQQELGGNVLLRYL 95
Query: 286 VWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVK 338
W+ + I V + + P + GSGIP++K L+G+ + + IK K
Sbjct: 96 SWIVYPIALVAFSTGFAQSITPHSGGSGIPELKTILSGVILEEYLTIKNFGAK 148
>sp|P21564|CICH_TORMA Chloride channel protein OS=Torpedo marmorata PE=1 SV=1
Length = 805
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 276 GNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTL 335
GN G+ VW+ + + +L SL V P A+GSGIP++K + G + + ++T
Sbjct: 89 GNIGL--QYLVWVCYPLALILFSSLFCQIVSPQAVGSGIPELKTIIRGAVLHEYLTLRTF 146
Query: 336 VVKT 339
V KT
Sbjct: 147 VAKT 150
>sp|Q9MZT1|CLCN1_CANFA Chloride channel protein 1 OS=Canis familiaris GN=CLCN1 PE=1 SV=1
Length = 976
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 286 VWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAAS 345
VW+ F + +L ++ + P A+GSGIP++K L G+ + + +K V K + A
Sbjct: 163 VWVTFPLTLILFSAVFCHLISPQAVGSGIPEMKTILRGVILKEYLTLKAFVAKVVALTAG 222
>sp|P51801|CLCKB_HUMAN Chloride channel protein ClC-Kb OS=Homo sapiens GN=CLCNKB PE=1 SV=3
Length = 687
Score = 38.5 bits (88), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 229 LYKDFARWVIFFLIGVLTACIGIFIDISIEFIAVFKYSTLKRYLDNSGNTGMLVPLAVWL 288
L++ W +GVL A + +D+++E + V + L R + +S L +L
Sbjct: 43 LFRLGEDWYFLMTLGVLMALVSCAMDLAVESV-VRAHQWLYREIGDSH-------LLRYL 94
Query: 289 GFNIVPVLIGSLLVVY---VEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVKTNRIAAS 345
+ + PV + S + + P + GSGIP+VK L G+ + + IK K ++ +
Sbjct: 95 SWTVYPVALVSFSSGFSQSITPSSGGSGIPEVKTMLAGVVLEDYLDIKNFGAKVVGLSCT 154
Query: 346 RVC 348
C
Sbjct: 155 LAC 157
>sp|Q7MDF0|CLCA_VIBVY H(+)/Cl(-) exchange transporter ClcA OS=Vibrio vulnificus (strain
YJ016) GN=clcA PE=3 SV=1
Length = 467
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 199 IISSKFESLDYDLMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIE 258
II S + D + +L+ T S F+ L+GVL +G + +I++
Sbjct: 7 IIQSVLVKVPKDAINQFLSHGSTPISVLFLAA----------LVGVLAGLVGTYFEIAVH 56
Query: 259 FIAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPV---LIGSLLVVYVEPVALGSGIP 315
F++ + LK G L+PL WL ++ +G LV P A GSGIP
Sbjct: 57 FVSETRTEWLKS------EIGHLLPL--WLAAILISAALAFVGYFLVHRFAPEAAGSGIP 108
Query: 316 QVKCYLNGIKMPRLVRI 332
+++ ++ I+ R R+
Sbjct: 109 EIEGAMDNIRPVRWWRV 125
>sp|Q8D6J0|CLCA_VIBVU H(+)/Cl(-) exchange transporter ClcA OS=Vibrio vulnificus (strain
CMCP6) GN=clcA PE=3 SV=1
Length = 467
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 199 IISSKFESLDYDLMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIE 258
II S + D + +L+ T S F+ L+GVL +G + +I++
Sbjct: 7 IIQSVLVKVPKDAINQFLSHGSTPISVLFLAA----------LVGVLAGLVGTYFEIAVH 56
Query: 259 FIAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPV---LIGSLLVVYVEPVALGSGIP 315
F++ + LK G L+PL WL ++ +G LV P A GSGIP
Sbjct: 57 FVSETRTEWLKS------EIGHLLPL--WLAAILISAALAFVGYFLVHRFAPEAAGSGIP 108
Query: 316 QVKCYLNGIKMPRLVRI 332
+++ ++ I+ R R+
Sbjct: 109 EIEGAMDNIRPVRWWRV 125
>sp|O60159|YHYB_SCHPO Putative anion/proton exchange transporter C19C7.11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC19C7.11 PE=3 SV=2
Length = 766
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%)
Query: 286 VWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVK 338
++ F ++ VL +++V V P+A GSGI ++KC ++G + + ++VK
Sbjct: 149 IYTAFALLFVLCAAIMVRDVAPLAAGSGISEIKCIISGFLRDSFLSFRVMLVK 201
>sp|A7N6K9|CLCA_VIBHB H(+)/Cl(-) exchange transporter ClcA OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=clcA PE=3 SV=1
Length = 468
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 199 IISSKFESLDYDLMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIE 258
I+ S + D + ++++ T S++ + ++G L +G + +I++
Sbjct: 7 IVKSVLAHVPKDAINQFVSRGSTPTSFSVLFMAA--------IVGTLAGLVGTYFEIAVH 58
Query: 259 FIAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVP---VLIGSLLVVYVEPVALGSGIP 315
F++ + LK G ++PL WL ++ IG LV P A GSGIP
Sbjct: 59 FVSETRTEWLKS------EIGSVLPL--WLAAILISGALAFIGYYLVNRFAPEASGSGIP 110
Query: 316 QVKCYLNGIKMPRLVRI 332
+++ ++ I+ R R+
Sbjct: 111 EIEGAMDNIRSVRWWRV 127
>sp|Q87GZ9|CLCA_VIBPA H(+)/Cl(-) exchange transporter ClcA OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=clcA PE=3 SV=1
Length = 467
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 199 IISSKFESLDYDLMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIE 258
I+ S + D + ++++ T F+ ++ ++G L +G + ++++
Sbjct: 7 IVKSVLAHVPKDAINQFVSRGST----------PFSVLIMAAIVGTLAGFVGTYFELAVH 56
Query: 259 FIAVFKYSTLKRYLDNSGNTGMLVPLAVWLGFNIVPVL---IGSLLVVYVEPVALGSGIP 315
F++ + L+ G ++PL WL ++ L IG LV P A GSGIP
Sbjct: 57 FVSETRTEWLRS------EIGSVLPL--WLAAVLISALLAFIGYFLVHRFAPEAAGSGIP 108
Query: 316 QVKCYLNGIKMPRLVRI 332
+++ ++ I+ R R+
Sbjct: 109 EIEGAMDNIRPVRWWRV 125
>sp|C3LVE3|CLCA_VIBCM H(+)/Cl(-) exchange transporter ClcA OS=Vibrio cholerae serotype O1
(strain M66-2) GN=clcA PE=3 SV=1
Length = 468
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 210 DLMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIAVFKYSTLK 269
D++ +L++ +T F+ + L+G+L +G + + ++ ++ + LK
Sbjct: 18 DVINQFLSKDKT----------PFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLK 67
Query: 270 RYLDNSGNTGMLVPLAVWLGFNIVPVL---IGSLLVVYVEPVALGSGIPQVKCYLNGIKM 326
G +PL WL ++ IG LV P A GSGIP+++ ++G++
Sbjct: 68 S------EIGSFLPL--WLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRP 119
Query: 327 PRLVRI 332
R R+
Sbjct: 120 VRWWRV 125
>sp|Q9KM62|CLCA_VIBCH H(+)/Cl(-) exchange transporter ClcA OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=clcA PE=3
SV=1
Length = 468
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 210 DLMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIAVFKYSTLK 269
D++ +L++ +T F+ + L+G+L +G + + ++ ++ + LK
Sbjct: 18 DVINQFLSKDKT----------PFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLK 67
Query: 270 RYLDNSGNTGMLVPLAVWLGFNIVPVL---IGSLLVVYVEPVALGSGIPQVKCYLNGIKM 326
G +PL WL ++ IG LV P A GSGIP+++ ++G++
Sbjct: 68 S------EIGSFLPL--WLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRP 119
Query: 327 PRLVRI 332
R R+
Sbjct: 120 VRWWRV 125
>sp|A5F0D5|CLCA_VIBC3 H(+)/Cl(-) exchange transporter ClcA OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=clcA PE=3 SV=1
Length = 468
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 210 DLMENYLTQSETWKSYNFILYKDFARWVIFFLIGVLTACIGIFIDISIEFIAVFKYSTLK 269
D++ +L++ +T F+ + L+G+L +G + + ++ ++ + LK
Sbjct: 18 DVINQFLSKDKT----------PFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLK 67
Query: 270 RYLDNSGNTGMLVPLAVWLGFNIVPVL---IGSLLVVYVEPVALGSGIPQVKCYLNGIKM 326
G +PL WL ++ IG LV P A GSGIP+++ ++G++
Sbjct: 68 S------EIGSFLPL--WLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRP 119
Query: 327 PRLVRI 332
R R+
Sbjct: 120 VRWWRV 125
>sp|O94287|YOO2_SCHPO Uncharacterized chloride channel protein C887.02
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC887.02 PE=3 SV=2
Length = 696
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 281 LVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVKCYLNGIKMPRL---VRIKTLVV 337
L+ ++V +GF + +G + V P A SGIP +K L+G K P + IKTL
Sbjct: 107 LIYVSVSVGFAFIATTLGYV----VAPAARASGIPTIKAILSGYKYPDMNVFFSIKTLCS 162
Query: 338 KT 339
K+
Sbjct: 163 KS 164
>sp|Q9TTU3|CLCN5_RABIT H(+)/Cl(-) exchange transporter 5 OS=Oryctolagus cuniculus GN=CLCN5
PE=2 SV=1
Length = 746
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 34/141 (24%)
Query: 233 FARWVIFFLIGVLTACIGIFIDISIEFIAVFK---------------------------- 264
F+ W++ LIG+ + + IDIS ++ K
Sbjct: 55 FSGWLLMLLIGLFSGSLAGLIDISAHWMTDLKEGICTGGFWFNHEHCCWNSENVTFEDTD 114
Query: 265 ----YSTLKRYLDNS--GNTGMLVPLAVWLGFNIVPVLIGSLLVVYVEPVALGSGIPQVK 318
+++ + + N+ G +V +++ + ++ + LV P A GSGIP++K
Sbjct: 115 KCPEWNSWSQLIINTDEGAFAYIVNYFMYVLWALLFAFLAVSLVKVFAPYACGSGIPEIK 174
Query: 319 CYLNGIKMPRLVRIKTLVVKT 339
L+G + + TLV+KT
Sbjct: 175 TILSGFIIRGYLGKWTLVIKT 195
>sp|Q5VST9|OBSCN_HUMAN Obscurin OS=Homo sapiens GN=OBSCN PE=1 SV=3
Length = 7968
Score = 32.7 bits (73), Expect = 3.8, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 23 PPLMQQDSETSILPRQSRSRRRKCSVLPTVDTVIETTIKKGASNIISSKFESLDYDLMEN 82
PP Q+ + +L ++ +R+R+ S PT+D++ E + G S + + E + DL E
Sbjct: 4727 PPEAAQEGDLHLL-WEALARKRRMSREPTLDSISELPEEDGRSQRLPQEAEEVAPDLSEG 4785
Query: 83 YLT 85
Y T
Sbjct: 4786 YST 4788
>sp|Q5RBK4|CLCN5_PONAB H(+)/Cl(-) exchange transporter 5 OS=Pongo abelii GN=CLCN5 PE=2
SV=1
Length = 746
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 301 LVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVKT 339
LV P A GSGIP++K L+G + + TLV+KT
Sbjct: 157 LVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLVIKT 195
>sp|P51795|CLCN5_HUMAN H(+)/Cl(-) exchange transporter 5 OS=Homo sapiens GN=CLCN5 PE=1
SV=1
Length = 746
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 301 LVVYVEPVALGSGIPQVKCYLNGIKMPRLVRIKTLVVKT 339
LV P A GSGIP++K L+G + + TLV+KT
Sbjct: 157 LVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLVIKT 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,963,444
Number of Sequences: 539616
Number of extensions: 4985744
Number of successful extensions: 13647
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 13494
Number of HSP's gapped (non-prelim): 169
length of query: 354
length of database: 191,569,459
effective HSP length: 118
effective length of query: 236
effective length of database: 127,894,771
effective search space: 30183165956
effective search space used: 30183165956
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)