BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15910
(404 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FAI|A Chain A, Crystal Structure Of Mitochondrial Isoform Of Glutaminyl
Cyclase From Drosophila Melanogaster
pdb|4FAI|B Chain B, Crystal Structure Of Mitochondrial Isoform Of Glutaminyl
Cyclase From Drosophila Melanogaster
Length = 330
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 129/223 (57%), Gaps = 19/223 (8%)
Query: 188 QYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS- 246
+YI+ L+ DVE ++F D P G+L F NII +NP A R L L+CHYDSK M
Sbjct: 63 EYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDSKYMPGV 122
Query: 247 PFIGATDSAVPCAMLLYIARLMRQELSQLNQN-LGLDLIFFDGEEAFNEWSAEDSIWGAR 305
F+GATDSAVPCAMLL +A++++++L L ++ L L L+FFDGEEAF EW +DSI+GAR
Sbjct: 123 EFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGAR 182
Query: 306 HLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVGIESR 365
HLA KW H GK G +P FYS++ T WY ++ +E+R
Sbjct: 183 HLAKKW-----HHEGKL----DRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETR 233
Query: 366 LTARGLLNMVNSN---RSKKLTYFREM---STFPVAEDDHLPF 402
L LL S+ + YF+ S+F EDDH+PF
Sbjct: 234 LAKLQLLERYASSGVAQRDPTRYFQSQAMRSSF--IEDDHIPF 274
>pdb|4FBE|A Chain A, Crystal Structure Of The C136aC164A VARIANT OF
MITOCHONDRIAL ISOFORM Of Glutaminyl Cyclase From
Drosophila Melanogaster
pdb|4FBE|B Chain B, Crystal Structure Of The C136aC164A VARIANT OF
MITOCHONDRIAL ISOFORM Of Glutaminyl Cyclase From
Drosophila Melanogaster
Length = 330
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 127/223 (56%), Gaps = 19/223 (8%)
Query: 188 QYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS- 246
+YI+ L+ DVE ++F D P G+L F NII +NP A R L L+ HYDSK M
Sbjct: 63 EYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSAHYDSKYMPGV 122
Query: 247 PFIGATDSAVPCAMLLYIARLMRQELSQLNQN-LGLDLIFFDGEEAFNEWSAEDSIWGAR 305
F+GATDSAVP AMLL +A++++++L L ++ L L L+FFDGEEAF EW +DSI+GAR
Sbjct: 123 EFLGATDSAVPAAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGAR 182
Query: 306 HLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVGIESR 365
HLA KW H GK G +P FYS++ T WY ++ +E+R
Sbjct: 183 HLAKKW-----HHEGKL----DRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETR 233
Query: 366 LTARGLLNMVNSN---RSKKLTYFREM---STFPVAEDDHLPF 402
L LL S+ + YF+ S+F EDDH+PF
Sbjct: 234 LAKLQLLERYASSGVAQRDPTRYFQSQAMRSSF--IEDDHIPF 274
>pdb|3SI0|A Chain A, Structure Of Glycosylated Human Glutaminyl Cyclase
Length = 330
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 58 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 116
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 117 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 176
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 177 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 236
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 237 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 279
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 279 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 316
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 317 NKILQVFVLE 326
>pdb|2ZEL|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D248a At 1.97 Angstrom Resolution
pdb|2ZEL|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D248a At 1.97 Angstrom Resolution
Length = 329
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLALIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2ZEM|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D248q At 2.18 Angstrom Resolution
pdb|2ZEM|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D248q At 2.18 Angstrom Resolution
Length = 329
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLQLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2AFM|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase At Ph 6.5
pdb|2AFM|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase At Ph 6.5
pdb|2AFO|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase At Ph 8.0
pdb|2AFO|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase At Ph 8.0
pdb|2AFW|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With N-Acetylhistamine
pdb|2AFW|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With N-Acetylhistamine
pdb|2AFX|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Benzylimidazole
pdb|2AFX|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Benzylimidazole
pdb|2AFZ|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Vinylimidazole
pdb|2AFZ|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Vinylimidazole
pdb|3PBB|A Chain A, Crystal Structure Of Human Secretory Glutaminyl Cyclase In
Complex With Pbd150
pdb|3PBB|B Chain B, Crystal Structure Of Human Secretory Glutaminyl Cyclase In
Complex With Pbd150
Length = 329
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2ZEP|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
H319l At 2.1 Angstrom Resolution
pdb|2ZEP|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
H319l At 2.1 Angstrom Resolution
Length = 329
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VL IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLLLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|3SI2|A Chain A, Structure Of Glycosylated Murine Glutaminyl Cyclase In
Presence Of The Inhibitor Pq50 (Pdbd150)
Length = 327
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 15/212 (7%)
Query: 201 VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM----ASPFIGATDSAV 256
VE DTF P +G +F+NII +NP A R L LACHYDSK + F+GATDSAV
Sbjct: 70 VEVDTFLSRTP-YGYRSFSNIISTLNPEAKRHLVLACHYDSKYFPRWDSRVFVGATDSAV 128
Query: 257 PCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 310
PCAM+L +AR + ++L L +L L LIFFDGEEAF+ WS +DS++G+RHLA K
Sbjct: 129 PCAMMLELARALDKKLHSLKDVSGSKPDLSLQLIFFDGEEAFHHWSPQDSLYGSRHLAQK 188
Query: 311 WERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVGIESRLTARG 370
S + + G +NP F +++P T +W+ +L IE L G
Sbjct: 189 MASSPHPPGSRGTNQLDGMDLLVLLDLIGAANPTFPNFFPKTTRWFNRLQAIEKELYELG 248
Query: 371 LLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
LL + S + YF+ + +DDH+PF
Sbjct: 249 LLK----DHSLERKYFQNFGYGNIIQDDHIPF 276
>pdb|2AFS|A Chain A, Crystal Structure Of The Genetic Mutant R54w Of Human
Glutaminyl Cyclase
pdb|2AFS|B Chain B, Crystal Structure Of The Genetic Mutant R54w Of Human
Glutaminyl Cyclase
Length = 329
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|3SI1|A Chain A, Structure Of Glycosylated Murine Glutaminyl Cyclase
Length = 327
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 15/212 (7%)
Query: 201 VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM----ASPFIGATDSAV 256
VE DTF P +G +F+NII +NP A R L LACHYDSK + F+GATDSAV
Sbjct: 70 VEVDTFLSRTP-YGYRSFSNIISTLNPEAKRHLVLACHYDSKYFPRWDSRVFVGATDSAV 128
Query: 257 PCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 310
PCAM+L +AR + ++L L +L L LIFFDGEEAF+ WS +DS++G+RHLA K
Sbjct: 129 PCAMMLELARALDKKLHSLKDVSGSKPDLSLRLIFFDGEEAFHHWSPQDSLYGSRHLAQK 188
Query: 311 WERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQLVGIESRLTARG 370
S + + G +NP F +++P T +W+ +L IE L G
Sbjct: 189 MASSPHPPGSRGTNQLDGMDLLVLLDLIGAANPTFPNFFPKTTRWFNRLQAIEKELYELG 248
Query: 371 LLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
LL + S + YF+ + +DDH+PF
Sbjct: 249 LLK----DHSLERKYFQNFGYGNIIQDDHIPF 276
>pdb|2ZED|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160a At 1.7 Angstrom Resolution
pdb|2ZED|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160a At 1.7 Angstrom Resolution
Length = 329
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATD+AVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDAAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2AFU|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With Glutamine T-Butyl Ester
pdb|2AFU|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With Glutamine T-Butyl Ester
pdb|2ZEH|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201q At 1.8 Angstrom Resolution
pdb|2ZEH|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201q At 1.8 Angstrom Resolution
Length = 329
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDG+EAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGQEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2ZEF|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201d At 1.67 Angstrom Resolution
pdb|2ZEF|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201d At 1.67 Angstrom Resolution
Length = 329
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDG+EAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGDEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2ZEE|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160g At 1.99 Angstrom Resolution
pdb|2ZEE|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160g At 1.99 Angstrom Resolution
Length = 329
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 127/227 (55%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATD AVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDGAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2ZEO|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305e At 1.66 Angstrom Resolution
pdb|2ZEO|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305e At 1.66 Angstrom Resolution
Length = 329
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V ++DH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQEDHIPF 278
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2ZEN|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305a At 1.78 Angstrom Resolution
pdb|2ZEN|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305a At 1.78 Angstrom Resolution
Length = 329
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 127/227 (55%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V + DH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQADHIPF 278
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|2ZEG|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201l At 2.08 Angstrom Resolution
pdb|2ZEG|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201l At 2.08 Angstrom Resolution
Length = 329
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 127/227 (55%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDG EAF W
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGLEAFLHW 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|4F9U|A Chain A, Structure Of Glycosylated Glutaminyl Cyclase From
Drosophila Melanogaster
pdb|4F9U|B Chain B, Structure Of Glycosylated Glutaminyl Cyclase From
Drosophila Melanogaster
pdb|4FWU|A Chain A, Crystal Structure Of Glutaminyl Cyclase From Drosophila
Melanogaster In Space Group I4
Length = 312
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 118/224 (52%), Gaps = 13/224 (5%)
Query: 185 KIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM 244
++ +Y++ L G E D F VP FG LTF N++G +NP A L+LACHYDSK
Sbjct: 33 QVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSKYF 92
Query: 245 ASP--FIGATDSAVPCAMLLYIARLMRQELSQLNQN---LGLDLIFFDGEEAFNEWSAED 299
+ F+GATDSAVPCA+LL A+ + L + +N +GL LIFFDGEEAF EW+ D
Sbjct: 93 PNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDAD 152
Query: 300 SIWGARHLAAKWERSHLQHRGKTLTKXX-XXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQ 358
S++G++HLAAK + + + G NP+F S+Y T +
Sbjct: 153 SVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSS 212
Query: 359 LVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
LV IE L G L N+ F + + +DDH PF
Sbjct: 213 LVQIEKSLRTAGQLEGNNN-------MFLSRVSGGLVDDDHRPF 249
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 46 RVDMAEFNTVLDPILVERGVGSENHEVVKNLMGRGQGGNRFGNEPDLFR 94
R D FN LD ILV R VGS H+ V+ + + G F E D F+
Sbjct: 7 RDDEVHFNRTLDSILVPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFK 55
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 2 AEFNTVLDPILVERGVGSENHEVVKNSQHSARTLT----DEEIDEITSRV 47
FN LD ILV R VGS H+ V+ ++ ++L E+DE RV
Sbjct: 11 VHFNRTLDSILVPRVVGSRGHQQVR--EYLVQSLNGLGFQTEVDEFKQRV 58
>pdb|3PBE|A Chain A, Crystal Structure Of The Mutant W207f Of Human Secretory
Glutaminyl Cyclase
pdb|3PBE|B Chain B, Crystal Structure Of The Mutant W207f Of Human Secretory
Glutaminyl Cyclase
Length = 329
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 188 QYIISELKSSGLD--VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA 245
Q+I+ ++ D +E DTF P +G +F+NII +NPTA R L LACHYDSK +
Sbjct: 57 QHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFS 115
Query: 246 S----PFIGATDSAVPCAMLLYIARLMRQELSQLNQ------NLGLDLIFFDGEEAFNEW 295
F+GATDSAVPCAM+L +AR + ++L L +L L LIFFDGEEAF +
Sbjct: 116 HWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHF 175
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
S +DS++G+RHLAAK + + ++ G NP F +++P + +W
Sbjct: 176 SPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARW 235
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+++L IE L GLL + S + YF+ S V +DDH+PF
Sbjct: 236 FERLQAIEHELHELGLLK----DHSLEGRYFQNYSYGGVIQDDHIPF 278
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 22/70 (31%)
Query: 124 FVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183
F+ V VLH IP PFP V ++ DN+ LD +TI+NL
Sbjct: 278 FLRRGVPVLHLIPSPFPEVWHTMD----------------------DNEENLDESTIDNL 315
Query: 184 LKIFQYIISE 193
KI Q + E
Sbjct: 316 NKILQVFVLE 325
>pdb|3PB4|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase At Ph 6.0
pdb|3PB6|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase At Ph 6.5
pdb|3PB7|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase In Complex With Pbd150
pdb|3PB8|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase In Complex With
N-Acetylhistamine
pdb|3PB9|X Chain X, Crystal Structure Of The Catalytic Domain Of Human
Golgi-Resident Glutaminyl Cyclase In Complex With
1-Benzylimidazole
Length = 330
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 135/227 (59%), Gaps = 16/227 (7%)
Query: 184 LKIFQYIISELKS--SGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDS 241
L++ +++ + L+S +G VE D F+ + P G + F N++ ++P A R L+LACHYDS
Sbjct: 61 LQVRKFLEATLRSLTAGWHVELDPFTASTP-LGPVDFGNVVATLDPRAARHLTLACHYDS 119
Query: 242 KIM---ASPFIGATDSAVPCAMLLYIARLMRQELSQLNQN---LGLDLIFFDGEEAFNEW 295
K+ ++PF+GATDSAVPCA+LL +A+ + ELS+ + + L L+F DGEEA EW
Sbjct: 120 KLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEW 179
Query: 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKXXXXXXXXXXXXXGTSNPRFYSYYPPTHKW 355
+DS++G+RHLA E + H T+ G NP FYS++P T +W
Sbjct: 180 GPKDSLYGSRHLAQLMES--IPHSPGP-TRIQAIELFMLLDLLGAPNPTFYSHFPRTVRW 236
Query: 356 YKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
+ +L IE RL LN++ S+ +++ YF+ F EDDH+PF
Sbjct: 237 FHRLRSIEKRLHR---LNLLQSH-PQEVMYFQPGEPFGSVEDDHIPF 279
>pdb|4F9V|A Chain A, Structure Of C113aC136A MUTANT VARIANT OF GLYCOSYLATED
GLUTAMINYL Cyclase From Drosophila Melanogaster
pdb|4F9V|B Chain B, Structure Of C113aC136A MUTANT VARIANT OF GLYCOSYLATED
GLUTAMINYL Cyclase From Drosophila Melanogaster
Length = 312
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 116/224 (51%), Gaps = 13/224 (5%)
Query: 185 KIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM 244
++ +Y++ L G E D F VP FG LTF N++G +NP A L+LA HYDSK
Sbjct: 33 QVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALAAHYDSKYF 92
Query: 245 ASP--FIGATDSAVPCAMLLYIARLMRQELSQLNQN---LGLDLIFFDGEEAFNEWSAED 299
+ F+GATDSAVP A+LL A+ + L + +N +GL LIFFDGEEAF EW+ D
Sbjct: 93 PNDPGFVGATDSAVPAAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDAD 152
Query: 300 SIWGARHLAAKWERSHLQHRGKTLTKXX-XXXXXXXXXXXGTSNPRFYSYYPPTHKWYKQ 358
S++G++HLAAK + + + G NP+F S+Y T +
Sbjct: 153 SVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSS 212
Query: 359 LVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPF 402
LV IE L G L N+ F + + +DDH PF
Sbjct: 213 LVQIEKSLRTAGQLEGNNN-------MFLSRVSGGLVDDDHRPF 249
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 46 RVDMAEFNTVLDPILVERGVGSENHEVVKNLMGRGQGGNRFGNEPDLFR 94
R D FN LD ILV R VGS H+ V+ + + G F E D F+
Sbjct: 7 RDDEVHFNRTLDSILVPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFK 55
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 4 FNTVLDPILVERGVGSENHEVVKNSQHSARTLT----DEEIDEITSRV 47
FN LD ILV R VGS H+ V+ ++ ++L E+DE RV
Sbjct: 13 FNRTLDSILVPRVVGSRGHQQVR--EYLVQSLNGLGFQTEVDEFKQRV 58
>pdb|4FUU|A Chain A, Crystal Structure Of A Leucine Aminopeptidase Precursor
(Bt_2548) From Bacteroides Thetaiotaomicron Vpi-5482 At
1.30 A Resolution
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 189 YIISELKSSGLDVETDTFSDTVPNFGRL-TFTNIIGHVNPTAPRALSLACHYDSKIMA-- 245
Y+ +L++ G V T+ ++D + G L NIIG P + + ++L H+D++ A
Sbjct: 53 YLAGKLEAFGAKV-TNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWDTRPWADN 111
Query: 246 --------SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE----AFN 293
+P +GA D A LL IARL+ Q+ + LG+D+IF D E+ F
Sbjct: 112 DADEKNHHTPILGANDGASGVGALLEIARLVNQQQPE----LGIDIIFLDAEDYGTPQFY 167
Query: 294 EWSAEDSIW--GARHLAAKWERS-HLQ 317
E ++ W G+++ W R+ H+Q
Sbjct: 168 EGKHKEEAWCLGSQY----WSRNPHVQ 190
>pdb|3GUX|A Chain A, Crystal Structure Of A Putative Zn-Dependent Exopeptidase
(Bvu_1317) From Bacteroides Vulgatus Atcc 8482 At 1.80 A
Resolution
pdb|3GUX|B Chain B, Crystal Structure Of A Putative Zn-Dependent Exopeptidase
(Bvu_1317) From Bacteroides Vulgatus Atcc 8482 At 1.80 A
Resolution
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 16/114 (14%)
Query: 188 QYIISELKSSGLDVETDTFSDTVPNFGR-LTFTNIIGHVNPTAPRALSLACHYDSKIMA- 245
+Y+ +L+ G V + ++D + G L NIIG P + + + L H+DS+ A
Sbjct: 54 EYLAGQLEKFGAKV-YNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWDSRPYAD 112
Query: 246 ---------SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 290
+P +G D A +LL IAR +++E LG+D++FFD E+
Sbjct: 113 NDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKEQPA----LGIDIVFFDSED 162
>pdb|3TC8|A Chain A, Crystal Structure Of A Hypothetical Zn-Dependent
Exopeptidase (Bdi_3547) From Parabacteroides Distasonis
Atcc 8503 At 1.06 A Resolution
pdb|3TC8|B Chain B, Crystal Structure Of A Hypothetical Zn-Dependent
Exopeptidase (Bdi_3547) From Parabacteroides Distasonis
Atcc 8503 At 1.06 A Resolution
Length = 309
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 189 YIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA--- 245
Y+ SELK G V T + +L NIIG +P + + L H+DS+ +
Sbjct: 53 YLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWDSRPYSDHD 112
Query: 246 -------SPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEE 290
+P GA D LL IAR ++ Q +G+D+IFFD E+
Sbjct: 113 PDPSKHRTPLDGADDGGSGVGALLEIAR----QIGQKAPGIGIDIIFFDAED 160
>pdb|1H54|A Chain A, Maltose Phosphorylase From Lactobacillus Brevis
pdb|1H54|B Chain B, Maltose Phosphorylase From Lactobacillus Brevis
Length = 754
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 236 ACHYDSKIMASP-FIGATDSAVPCAMLLYIARLMRQELSQLN-QNLGLD-----LIFFDG 288
A ++D++ A P ++G TD V +L+Y R + + + +N Q GL ++ FDG
Sbjct: 355 ATYWDTEAFAFPVYLGITDPKVTRNLLMY--RYKQLDGAYINAQEQGLKGALFPMVTFDG 412
Query: 289 EEAFNEW 295
E NEW
Sbjct: 413 IECHNEW 419
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|B Chain B, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|C Chain C, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|D Chain D, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|E Chain E, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|F Chain F, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0W|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana
Length = 539
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 258 CAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLA 308
C ++ RL Q QLN G++ +FFD ++ ++W E + A
Sbjct: 457 CPIVCVTTRL--QTCRQLNITQGVESVFFDADKLGHDWGKEHRVAAGVEFA 505
>pdb|2HNH|A Chain A, Crystal Structure Of The Catalytic Alpha Subunit Of E.
Coli Replicative Dna Polymerase Iii
Length = 910
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 121 CTSFVISDVNVLHCIPYPFPSVRTFLNRDFFNERIN-----GGFPKVLIEGIISDNKSAL 175
T F SDV + + F +RT ++ E IN G P + I I D+K +
Sbjct: 538 VTQFDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSF 597
Query: 176 DMNTIENLLKIFQYIISELKSSGLDVETDTFSDTV 210
DM +FQ +K ++ D F D +
Sbjct: 598 DMLQRSETTAVFQLESRGMKDLIKRLQPDCFEDMI 632
>pdb|1WGM|A Chain A, Solution Structure Of The U-Box In Human Ubiquitin
Conjugation Factor E4a
Length = 98
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 108 ALTRQTLPTYAGSCTSFVISDVNVLHCIPYPFPSVRTFLNR 148
L +Q TYA +C F+ ++ L C P PS R ++R
Sbjct: 7 GLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDR 47
>pdb|3RF9|A Chain A, X-Ray Structure Of Rlmn From Escherichia Coli
pdb|3RF9|B Chain B, X-Ray Structure Of Rlmn From Escherichia Coli
Length = 404
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 357 KQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYY 404
+QLV E+ T G +N+++ NR + +F+++ P D + + Y
Sbjct: 3 EQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY 50
>pdb|3RFA|A Chain A, X-Ray Structure Of Rlmn From Escherichia Coli In Complex
With S- Adenosylmethionine
pdb|3RFA|B Chain B, X-Ray Structure Of Rlmn From Escherichia Coli In Complex
With S- Adenosylmethionine
Length = 404
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 357 KQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFYY 404
+QLV E+ T G +N+++ NR + +F+++ P D + + Y
Sbjct: 3 EQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY 50
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,956,343
Number of Sequences: 62578
Number of extensions: 486206
Number of successful extensions: 1207
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1048
Number of HSP's gapped (non-prelim): 68
length of query: 404
length of database: 14,973,337
effective HSP length: 101
effective length of query: 303
effective length of database: 8,652,959
effective search space: 2621846577
effective search space used: 2621846577
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)