Query psy15910
Match_columns 404
No_of_seqs 342 out of 1889
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 16:20:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15910.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15910hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fai_A CG5976, isoform B; alph 100.0 9.3E-52 3.2E-56 409.2 22.8 256 26-403 14-275 (330)
2 3pb6_X Glutaminyl-peptide cycl 100.0 1E-49 3.5E-54 396.4 25.3 258 25-403 12-280 (330)
3 4f9u_A CG32412; alpha/beta hyd 100.0 8.6E-47 2.9E-51 368.6 21.5 209 188-403 36-250 (312)
4 2afw_A Glutaminyl-peptide cycl 100.0 5.6E-41 1.9E-45 331.1 24.2 261 25-403 6-279 (329)
5 4fuu_A Leucine aminopeptidase; 100.0 1.2E-33 4.1E-38 276.3 18.7 217 146-403 22-256 (309)
6 3tc8_A Leucine aminopeptidase; 100.0 1.5E-33 5.1E-38 277.1 15.7 195 181-403 45-255 (309)
7 3gux_A Putative Zn-dependent e 100.0 4.3E-32 1.5E-36 267.8 18.2 217 145-403 23-258 (314)
8 1tkj_A Aminopeptidase, SGAP; d 99.9 2E-22 6.9E-27 194.2 15.6 138 181-346 32-170 (284)
9 1rtq_A Bacterial leucyl aminop 99.8 3.8E-20 1.3E-24 179.4 18.4 136 181-342 40-185 (299)
10 3iib_A Peptidase M28; YP_92679 99.8 1.6E-20 5.5E-25 192.4 16.5 134 185-345 204-340 (444)
11 2ek8_A Aminopeptidase; metallo 99.8 1.1E-19 3.7E-24 184.3 11.4 127 185-343 172-308 (421)
12 3kas_A Transferrin receptor pr 99.7 1.9E-17 6.5E-22 177.3 10.7 107 216-345 264-374 (640)
13 3fed_A Glutamate carboxypeptid 99.7 1.7E-16 5.7E-21 171.6 11.2 107 216-345 310-419 (707)
14 3n5f_A L-carbamoylase, N-carba 99.6 2.8E-15 9.6E-20 149.9 15.8 134 146-309 2-141 (408)
15 3k9t_A Putative peptidase; str 99.6 1.9E-14 6.4E-19 146.9 13.9 166 128-343 90-259 (435)
16 1q7l_A Aminoacylase-1; catalys 99.5 8.3E-14 2.8E-18 127.2 15.2 112 182-311 30-162 (198)
17 4h2k_A Succinyl-diaminopimelat 99.5 3.4E-13 1.2E-17 128.5 16.8 126 184-340 26-170 (269)
18 3t68_A Succinyl-diaminopimelat 99.5 1.7E-13 5.8E-18 130.3 14.5 126 184-340 26-170 (268)
19 1z2l_A Allantoate amidohydrola 99.5 2.6E-13 8.8E-18 135.9 14.1 134 148-311 8-147 (423)
20 2v8h_A Beta-alanine synthase; 99.4 1.1E-12 3.9E-17 134.3 14.3 116 164-309 57-175 (474)
21 1cg2_A Carboxypeptidase G2; me 99.4 2.4E-12 8.3E-17 127.8 15.9 115 181-311 39-167 (393)
22 2zog_A Cytosolic non-specific 99.4 3.1E-12 1E-16 130.1 16.3 137 181-337 43-200 (479)
23 3gb0_A Peptidase T; NP_980509. 99.3 5.2E-12 1.8E-16 124.2 12.1 111 183-308 25-152 (373)
24 2pok_A Peptidase, M20/M25/M40 99.3 1.8E-11 6.1E-16 125.0 16.4 112 181-311 64-195 (481)
25 3ife_A Peptidase T; metallopep 99.3 4.7E-12 1.6E-16 127.9 11.2 130 149-308 27-210 (434)
26 1vgy_A Succinyl-diaminopimelat 99.3 2.2E-11 7.4E-16 121.0 15.4 111 184-313 26-154 (393)
27 1vhe_A Aminopeptidase/glucanas 99.3 6E-12 2.1E-16 125.3 10.8 117 184-340 27-243 (373)
28 3ct9_A Acetylornithine deacety 99.3 1.6E-11 5.5E-16 120.9 12.4 103 184-310 31-151 (356)
29 3dlj_A Beta-Ala-His dipeptidas 99.3 7.4E-11 2.5E-15 120.9 17.2 137 181-338 50-208 (485)
30 3rza_A Tripeptidase; phosphory 99.3 1.9E-11 6.4E-16 121.7 12.3 111 183-308 43-173 (396)
31 3isz_A Succinyl-diaminopimelat 99.2 8.6E-11 2.9E-15 114.7 15.2 111 184-313 23-151 (377)
32 1y0y_A FRV operon protein FRVX 99.2 1E-11 3.6E-16 122.4 8.4 115 184-341 27-240 (353)
33 1fno_A Peptidase T; metallo pe 99.2 2.4E-11 8.3E-16 121.5 10.8 104 181-308 29-183 (417)
34 3pfo_A Putative acetylornithin 99.2 8.8E-11 3E-15 117.7 14.9 132 183-339 45-205 (433)
35 2rb7_A Peptidase, M20/M25/M40 99.2 2.5E-11 8.6E-16 119.8 10.5 108 181-310 26-153 (364)
36 1lfw_A PEPV; hydrolase, dipept 99.2 2.6E-10 8.7E-15 115.7 17.8 108 181-311 43-167 (470)
37 2gre_A Deblocking aminopeptida 99.2 2.9E-11 1E-15 119.1 9.6 118 184-341 26-246 (349)
38 2wyr_A Cobalt-activated peptid 99.2 1.5E-11 5.2E-16 119.9 6.6 116 184-341 22-233 (332)
39 3pfe_A Succinyl-diaminopimelat 99.2 4.3E-10 1.5E-14 114.9 15.5 126 182-337 46-192 (472)
40 3tx8_A Succinyl-diaminopimelat 99.1 2.2E-10 7.5E-15 112.4 12.6 106 183-310 32-151 (369)
41 1ysj_A Protein YXEP; M20 famil 99.1 1.9E-10 6.5E-15 115.1 12.2 107 183-310 51-169 (404)
42 2fvg_A Endoglucanase; TM1049, 99.1 4.3E-11 1.5E-15 117.4 7.3 115 184-340 18-224 (340)
43 1xmb_A IAA-amino acid hydrolas 99.1 5.3E-10 1.8E-14 112.3 13.6 106 183-310 47-163 (418)
44 3khx_A Putative dipeptidase sa 99.1 7.1E-10 2.4E-14 114.3 12.0 107 181-311 63-186 (492)
45 3mru_A Aminoacyl-histidine dip 99.0 7.4E-10 2.5E-14 114.2 9.3 100 184-309 34-161 (490)
46 2qyv_A XAA-His dipeptidase; YP 99.0 4.8E-10 1.6E-14 114.8 7.8 101 183-309 30-158 (487)
47 3ram_A HMRA protein; two-domai 99.0 1.4E-09 4.9E-14 108.8 11.0 120 183-337 35-157 (394)
48 1ylo_A Hypothetical protein SF 99.0 2.4E-09 8.2E-14 104.5 12.0 102 184-309 23-213 (348)
49 2f7v_A Aectylcitrulline deacet 99.0 1.3E-09 4.4E-14 107.4 8.9 100 182-310 32-147 (369)
50 3io1_A Aminobenzoyl-glutamate 98.9 1.5E-08 5.1E-13 102.9 13.1 130 183-336 33-209 (445)
51 1vho_A Endoglucanase; structur 98.8 2.6E-09 8.8E-14 104.5 6.1 119 183-341 24-232 (346)
52 3kl9_A PEPA, glutamyl aminopep 98.7 2.8E-08 9.7E-13 99.3 9.5 120 183-342 22-243 (355)
53 3cpx_A Aminopeptidase, M42 fam 98.5 3.1E-08 1.1E-12 96.9 3.0 121 183-340 36-222 (321)
54 2vpu_A TET3, 354AA long hypoth 98.4 5.2E-07 1.8E-11 90.2 10.0 113 185-340 31-242 (354)
55 2wzn_A TET3, 354AA long hypoth 98.3 7.6E-09 2.6E-13 96.0 -7.8 92 184-291 30-129 (354)
56 3isx_A Endoglucanase; TM1050, 98.2 2E-06 6.7E-11 85.8 7.9 49 183-244 30-78 (343)
57 2ijz_A Probable M18-family ami 79.2 0.49 1.7E-05 48.3 0.7 62 181-244 16-87 (428)
58 2glj_A Probable M18-family ami 74.5 1.3 4.4E-05 45.7 2.3 57 186-244 40-107 (461)
59 2ijz_A Probable M18-family ami 72.8 0.95 3.2E-05 46.2 0.9 73 249-346 231-316 (428)
60 1y7e_A Probable M18-family ami 71.2 0.34 1.2E-05 49.9 -2.9 37 250-291 252-288 (458)
61 2glf_A Probable M18-family ami 70.2 0.68 2.3E-05 47.6 -0.9 35 250-291 246-280 (450)
62 2glj_A Probable M18-family ami 69.3 0.51 1.8E-05 48.6 -2.1 36 250-291 258-293 (461)
63 3vat_A Dnpep, aspartyl aminope 66.8 0.99 3.4E-05 47.1 -0.5 40 250-291 282-324 (496)
64 2glf_A Probable M18-family ami 63.8 5 0.00017 41.2 4.0 60 183-244 33-98 (450)
65 1y7e_A Probable M18-family ami 58.2 3.3 0.00011 42.5 1.5 60 183-244 35-101 (458)
66 2ek8_A Aminopeptidase; metallo 55.4 10 0.00034 37.8 4.4 51 144-207 11-61 (421)
67 3iib_A Peptidase M28; YP_92679 51.3 13 0.00043 37.6 4.4 27 181-207 42-69 (444)
68 3kas_A Transferrin receptor pr 33.4 27 0.00091 37.3 3.7 25 181-205 40-65 (640)
69 2q22_A Uncharacterized protein 32.7 43 0.0015 29.1 4.3 59 183-241 62-122 (139)
70 3eik_A Tata-box-binding protei 28.2 46 0.0016 31.0 3.9 39 178-226 105-143 (218)
71 1ytb_A Protein (tata binding p 25.1 45 0.0016 30.0 3.2 39 178-226 67-105 (180)
No 1
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=9.3e-52 Score=409.16 Aligned_cols=256 Identities=45% Similarity=0.806 Sum_probs=224.2
Q ss_pred ecccccCCCCCHHHHHHHhccCChhhHHhhccCcceeccCCCCchhhhhhhhcCCCCCCCCCCCCccccccccCCCCccc
Q psy15910 26 KNSQHSARTLTDEEIDEITSRVDMAEFNTVLDPILVERGVGSENHEVVKNLMGRGQGGNRFGNEPDLFRIKFTPGGNRTR 105 (404)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (404)
++..|.|..|+++++.+++++.|..+++++|+|||+||+|||++|+.|+
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~il~pR~~Gs~~~~~~~------------------------------- 62 (330)
T 4fai_A 14 PKISYNPSELSEPRFLEYSNLSDKLHLREAIDKILIPRVVGTTNHSIVR------------------------------- 62 (330)
T ss_dssp CGGGCCCCCSCHHHHHHHHTCCCHHHHHHHHHHHCSCCCTTSHHHHHHH-------------------------------
T ss_pred cccccCCCcCCHHHHHhcccccHHHHHHHHHHhhcCCCCCCCHHHHHHH-------------------------------
Confidence 4788999999999999999999999999999999999999999997666
Q ss_pred hhhhhhccCCCCCCCcceeEEecccccccCCCCCCccccccchHHHHHHHhcCCCcccccceeccccccccccChHhHHH
Q psy15910 106 DLALTRQTLPTYAGSCTSFVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENLLK 185 (404)
Q Consensus 106 ~~~~~~~~~~~~~g~~~~f~i~~~~~~~~~~~~~p~~~~~in~~~~~~~l~~~~~~~~~~gi~r~~~s~~~~~~~~~~~~ 185 (404)
T Consensus 63 -------------------------------------------------------------------------------- 62 (330)
T 4fai_A 63 -------------------------------------------------------------------------------- 62 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC-CCCCCCCCchHHHHHHHH
Q psy15910 186 IFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS-PFIGATDSAVPCAMLLYI 264 (404)
Q Consensus 186 a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d-~f~GA~D~AsGvA~LLEl 264 (404)
+||+++|+++||+|++|.|+..+|..|.+++.||||+++|+++++|||+|||||++.++ .++||+|||||||+|||+
T Consensus 63 --~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~ 140 (330)
T 4fai_A 63 --EYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNL 140 (330)
T ss_dssp --HHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHH
T ss_pred --HHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHH
Confidence 99999999999999999999999877889999999999999999999999999998865 489999999999999999
Q ss_pred HHHHHHHhhc-CCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEeccCCCCCC
Q psy15910 265 ARLMRQELSQ-LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLGTSNP 343 (404)
Q Consensus 265 Ar~L~~~l~~-~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG~~~p 343 (404)
||.|++.++. .+++++|+|+||||||....|++.++++||++||+.|... .++++|.++|||||+|.+++
T Consensus 141 Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~~~~~---------~~~~~i~~~inlDmiG~~~~ 211 (330)
T 4fai_A 141 AQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKWHHE---------GKLDRIDMLVLLDLLGAPDP 211 (330)
T ss_dssp HHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHHHHHT---------TCSTTEEEEEEECSCSSSSC
T ss_pred HHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHHHhcchhc---------cchhceeEEEEeccCccCCC
Confidence 9999886532 4689999999999999988999999999999999998764 46789999999999999999
Q ss_pred cceecCCCcHHHHHHHHHHHHHHHHcCCCcccccCCc---cccccccccC-CCCCCCCCCCCcC
Q psy15910 344 RFYSYYPPTHKWYKQLVGIESRLTARGLLNMVNSNRS---KKLTYFREMS-TFPVAEDDHLPFY 403 (404)
Q Consensus 344 ~f~~~~~~T~~~~~~l~~iE~rL~~~glL~~~~~~~~---~~~~yF~~~~-~~g~I~DDHiPFl 403 (404)
.+++++..|..++.++..+|++++..+++..+..... ....||.+.. ..+.+.|||+||+
T Consensus 212 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~ 275 (330)
T 4fai_A 212 AFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFL 275 (330)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHHHTTC---------------CCEEEEEETTCCCCSTTHHHH
T ss_pred CceeeccCcchHHHHHHHHHHHhhhhhhhhhhhccccccccccccccccCCCCCCCCCchHHHH
Confidence 9999999999999999999999999999876654321 1235776543 4667899999996
No 2
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=1e-49 Score=396.37 Aligned_cols=258 Identities=39% Similarity=0.725 Sum_probs=226.3
Q ss_pred eecccccCC--CCCHHHHHHHhccCChhh-HHhhccCcceeccCCCCchhhhhhhhcCCCCCCCCCCCCccccccccCCC
Q psy15910 25 VKNSQHSAR--TLTDEEIDEITSRVDMAE-FNTVLDPILVERGVGSENHEVVKNLMGRGQGGNRFGNEPDLFRIKFTPGG 101 (404)
Q Consensus 25 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (404)
..+..|.|. .||+++++.+.+..|.++ |++.|.||+++|++||++|.+++
T Consensus 12 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~~~R~~gS~~~~~a~--------------------------- 64 (330)
T 3pb6_X 12 LGRELRVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTPGSPGNLQVR--------------------------- 64 (330)
T ss_dssp ------CCCTTCCCHHHHHHHHHTCCHHHHHHHTTGGGCSCCCTTSHHHHHHH---------------------------
T ss_pred ccccccCCCcCCCCHHHHHhhcccCCHHHHHHHHHHHHhCCCCCCCHHHHHHH---------------------------
Confidence 345679998 999999999999999988 78899999999999998886555
Q ss_pred CccchhhhhhccCCCCCCCcceeEEecccccccCCCCCCccccccchHHHHHHHhcCCCcccccceeccccccccccChH
Q psy15910 102 NRTRDLALTRQTLPTYAGSCTSFVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIE 181 (404)
Q Consensus 102 ~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~~~~~~~~p~~~~~in~~~~~~~l~~~~~~~~~~gi~r~~~s~~~~~~~~ 181 (404)
T Consensus 65 -------------------------------------------------------------------------------- 64 (330)
T 3pb6_X 65 -------------------------------------------------------------------------------- 64 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHhC--CCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCCC---CCCCCCCch
Q psy15910 182 NLLKIFQYIISELKSS--GLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMASP---FIGATDSAV 256 (404)
Q Consensus 182 ~~~~a~~yI~~~L~~l--G~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d~---f~GA~D~As 256 (404)
+||+++|+++ ||+|++|.|+..+| .|..++.||||+++|+.+++||++|||||++.+++ ++||+|+|+
T Consensus 65 ------~~l~~~l~~~~~g~~v~~d~f~~~~~-~g~~~~~Nvia~~~g~~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~as 137 (330)
T 3pb6_X 65 ------KFLEATLRSLTAGWHVELDPFTASTP-LGPVDFGNVVATLDPRAARHLTLACHYDSKLFPPGSTPFVGATDSAV 137 (330)
T ss_dssp ------HHHHHHHHHSTTCCEEEEEEEEEEET-TEEEEEEEEEEESCTTSSEEEEEEEECCCCCCCTTSCCCCCTTTTHH
T ss_pred ------HHHHHHHHHhCCCCeEEEEeeecccc-cCCccceEEEEEECCCCCceEEEEeccCCCCCCCCCcCcCCCcCChH
Confidence 9999999999 99999999998888 67788999999999988889999999999986432 799999999
Q ss_pred HHHHHHHHHHHHHHHhh---cCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEE
Q psy15910 257 PCAMLLYIARLMRQELS---QLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLV 333 (404)
Q Consensus 257 GvA~LLElAr~L~~~l~---~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~I 333 (404)
|||+|||+||.|++.++ +.+++++|+||||++||.|++|+++|+|+||++|+++|+++++|+.+ .++++|+++|
T Consensus 138 Gva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~---~~~~~i~~~i 214 (330)
T 3pb6_X 138 PCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGP---TRIQAIELFM 214 (330)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCS---BTTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHhcCCcccc---chhhCeEEEE
Confidence 99999999999987431 14689999999999999999999999999999999999998877654 4789999999
Q ss_pred EeccCCCCCCcceecCCCcHHHHHHHHHHHHHHHHcCCCcccccCCccccccccccCCCCCCCCCCCCcC
Q psy15910 334 LLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFY 403 (404)
Q Consensus 334 lLDmIG~~~p~f~~~~~~T~~~~~~l~~iE~rL~~~glL~~~~~~~~~~~~yF~~~~~~g~I~DDHiPFl 403 (404)
||||+|++++.++++|++|.+|+..+.+||++++++|++.+++. +..||++....+.+.|||+||+
T Consensus 215 nlDmiG~~~~~~~~~~~~t~~~~~~l~~i~~~~~~~g~~~~~p~----~~~~f~~~~~~~~~~SDH~pF~ 280 (330)
T 3pb6_X 215 LLDLLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQ----EVMYFQPGEPFGSVEDDHIPFL 280 (330)
T ss_dssp EEESCSSSSCCBCCCCGGGHHHHHHHHHHHHHHHHTTCCSSCCS----SCSSBCSSCSSCCCSCTTHHHH
T ss_pred eccCCCCCCCCceeecCcchHHHHHHHHHHHHHHHcCccccCCc----ccccccccccCCCCCCchHhHH
Confidence 99999999999999999999999999999999999999987763 3479986556788999999996
No 3
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=8.6e-47 Score=368.60 Aligned_cols=209 Identities=44% Similarity=0.786 Sum_probs=181.4
Q ss_pred HHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC--CCCCCCCCchHHHHHHHHH
Q psy15910 188 QYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS--PFIGATDSAVPCAMLLYIA 265 (404)
Q Consensus 188 ~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d--~f~GA~D~AsGvA~LLElA 265 (404)
+||+++|+++||+|++|.|+..++..+.+++.||||+++|+.+++|||+|||||++.++ +++||+|||||||+|||+|
T Consensus 36 ~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElA 115 (312)
T 4f9u_A 36 EYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTA 115 (312)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHH
Confidence 99999999999999999999988877788999999999999999999999999998753 4899999999999999999
Q ss_pred HHHHHHhhc---CCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCc-cccccCCccEEEEeccCCCC
Q psy15910 266 RLMRQELSQ---LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGK-TLTKLDRMDMLVLLDLLGTS 341 (404)
Q Consensus 266 r~L~~~l~~---~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~-~~~~l~~I~~~IlLDmIG~~ 341 (404)
|.|.+.+.. .+++++|+|||||+||....|+++++|+||++|+++|.....+.... ....++++.++|++||+|.+
T Consensus 116 R~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~ 195 (312)
T 4f9u_A 116 KTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGAR 195 (312)
T ss_dssp HHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSS
T ss_pred HHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccC
Confidence 999875422 46899999999999999889999999999999999987654332111 12567899999999999999
Q ss_pred CCcceecCCCcHHHHHHHHHHHHHHHHcCCCcccccCCccccccccccCCCCCCCCCCCCcC
Q psy15910 342 NPRFYSYYPPTHKWYKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFY 403 (404)
Q Consensus 342 ~p~f~~~~~~T~~~~~~l~~iE~rL~~~glL~~~~~~~~~~~~yF~~~~~~g~I~DDHiPFl 403 (404)
++.+..++..+..++..+.++++++++.+.+..+. .+|.+....+.+.|||.||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~SDH~pF~ 250 (312)
T 4f9u_A 196 NPKFSSFYENTDGLHSSLVQIEKSLRTAGQLEGNN-------NMFLSRVSGGLVDDDHRPFL 250 (312)
T ss_dssp SCCEEECCGGGHHHHHHHHHHHHHHHHTTCSSSSC-------CCEEEEECSSCCCCTTHHHH
T ss_pred CCCceEEEeccchhhhHHHHHHHHHHHhccccccc-------cccccccCCCCCCCchHHHH
Confidence 99999999999999999999999999999887655 56666666778999999996
No 4
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=100.00 E-value=5.6e-41 Score=331.06 Aligned_cols=261 Identities=41% Similarity=0.711 Sum_probs=223.3
Q ss_pred eecccccCCCCCHHHHHHHhccCChhhH-HhhccCcceeccCCCCchhhhhhhhcCCCCCCCCCCCCccccccccCCCCc
Q psy15910 25 VKNSQHSARTLTDEEIDEITSRVDMAEF-NTVLDPILVERGVGSENHEVVKNLMGRGQGGNRFGNEPDLFRIKFTPGGNR 103 (404)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (404)
+.+.+|.|..++++++..+.+.+|.+++ .+.|+.|+.+|.+||++++.+
T Consensus 6 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~r~~~s~~~~~~------------------------------ 55 (329)
T 2afw_A 6 EEKNYHQPAILNSSALRQIAEGTSISEMWQNDLQPLLIERYPGSPGSYAA------------------------------ 55 (329)
T ss_dssp GHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHTTGGGCSCCCTTSHHHHHH------------------------------
T ss_pred hcccccCCCCCChHHHHHhhhhcCHHHHHHHHHHHHcCCCCCCCHHHHHH------------------------------
Confidence 3467899999999999999999999998 999999988999999776544
Q ss_pred cchhhhhhccCCCCCCCcceeEEecccccccCCCCCCccccccchHHHHHHHhcCCCcccccceeccccccccccChHhH
Q psy15910 104 TRDLALTRQTLPTYAGSCTSFVISDVNVLHCIPYPFPSVRTFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENL 183 (404)
Q Consensus 104 ~~~~~~~~~~~~~~~g~~~~f~i~~~~~~~~~~~~~p~~~~~in~~~~~~~l~~~~~~~~~~gi~r~~~s~~~~~~~~~~ 183 (404)
T Consensus 56 -------------------------------------------------------------------------------- 55 (329)
T 2afw_A 56 -------------------------------------------------------------------------------- 55 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHh--CCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCC---C-CCCCCCCCchH
Q psy15910 184 LKIFQYIISELKS--SGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA---S-PFIGATDSAVP 257 (404)
Q Consensus 184 ~~a~~yI~~~L~~--lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~---d-~f~GA~D~AsG 257 (404)
++||.++|++ +|++|++|.|...+| .|..+..||||+++|+.++.|+++|||||++.+ + .++||+|+++|
T Consensus 56 ---~~~l~~~l~~~~~G~~v~~~~~~~~~~-~g~~~~~Nvi~~~~g~~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sG 131 (329)
T 2afw_A 56 ---RQHIMQRIQRLQADWVLEIDTFLSQTP-YGYRSFSNIISTLNPTAKRHLVLACHYDSKYFSHWNNRVFVGATDSAVP 131 (329)
T ss_dssp ---HHHHHHHHHTSSSCCEEEEEEEEECCT-TSSEEEEEEEEESSTTSSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHH
T ss_pred ---HHHHHHHHHhhCCCCEEEEEEEEecCC-CCCceEeEEEEEECCCCCcEEEEEEeccCCCcCcccCcCCCCcccchhh
Confidence 4999999999 999999999988776 666789999999998877899999999999864 1 26899999999
Q ss_pred HHHHHHHHHHHHHHhhc------CCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccE
Q psy15910 258 CAMLLYIARLMRQELSQ------LNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDM 331 (404)
Q Consensus 258 vA~LLElAr~L~~~l~~------~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~ 331 (404)
||+|||+||.|++.... .+++++|+|+||++||.+..|++.++++||++|++.|.++++|+.+.....+++|.+
T Consensus 132 va~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~ 211 (329)
T 2afw_A 132 CAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDL 211 (329)
T ss_dssp HHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEE
T ss_pred HHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEE
Confidence 99999999999875311 257899999999999998889999999999999999998877765544456889999
Q ss_pred EEEeccCCCCCCcceecCCCcHHHHHHHHHHHHHHHHcCCCcccccCCccccccccccCCCCCCCCCCCCcC
Q psy15910 332 LVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFY 403 (404)
Q Consensus 332 ~IlLDmIG~~~p~f~~~~~~T~~~~~~l~~iE~rL~~~glL~~~~~~~~~~~~yF~~~~~~g~I~DDHiPFl 403 (404)
+|||||+|..++.+.++|..+.+++..+.++++++.+.|++.+++. ...||.+....+.+.|||.||+
T Consensus 212 ~inlD~iG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~----~~~~f~~~~~~g~~~sDh~~F~ 279 (329)
T 2afw_A 212 LVLLDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKDHSL----EGRYFQNYSYGGVIQDDHIPFL 279 (329)
T ss_dssp EEEECSCCSSSCCBCCCCGGGHHHHHHHHHHHHHHHHTTCSSSCCS----TTCSBCSCCCCSCCCSTTHHHH
T ss_pred EEEeccCCCCCCceeeeccCcchHHHHHHHHHHHHHHcCCccCCCc----ccccccccccCCCCCCCCHhHH
Confidence 9999999999998888888888889888899999999998865432 2367876555667899999996
No 5
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-33 Score=276.26 Aligned_cols=217 Identities=23% Similarity=0.254 Sum_probs=160.3
Q ss_pred cchHHHHHHHhc--CCCcccccceeccccccccccChHhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEE
Q psy15910 146 LNRDFFNERING--GFPKVLIEGIISDNKSALDMNTIENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIG 223 (404)
Q Consensus 146 in~~~~~~~l~~--~~~~~~~~gi~r~~~s~~~~~~~~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa 223 (404)
++.++..+.+.. .++. |...| +++.+|++||+++|+++||+|+.|.|...++....+++.||||
T Consensus 22 f~~~~a~~~l~~l~~fgp-------R~~gS-------~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~ 87 (309)
T 4fuu_A 22 FDADSAYLYVKNQVDFGP-------RVPNT-------KEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIG 87 (309)
T ss_dssp CCHHHHHHHHHHHHTTCC-------CCTTS-------HHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred cCHHHHHHHHHHHhCcCC-------cCCCC-------HHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEE
Confidence 477777777663 3331 22333 7889999999999999999999999987766333568999999
Q ss_pred EeCCCCCceEEEEEecCCcCCCC----------CCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc-c
Q psy15910 224 HVNPTAPRALSLACHYDSKIMAS----------PFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA-F 292 (404)
Q Consensus 224 ~l~g~a~~~IVLgAHYDSv~~~d----------~f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~-F 292 (404)
+++|+.+++|||+|||||++.++ +++||+|+|||||+|||+||.|.+ .+++++|+|+||++||. .
T Consensus 88 ~~~g~~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~----~~~~~~i~~~~~~~EE~Gl 163 (309)
T 4fuu_A 88 SYKPESKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQ----QQPELGIDIIFLDAEDYGT 163 (309)
T ss_dssp EESTTCSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHH----SCCSSEEEEEEECSSSCCC
T ss_pred EECCCCCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhh----cCCCCceEEEeecccccCc
Confidence 99999999999999999998753 378999999999999999999987 57899999999999995 1
Q ss_pred c---ccC--CCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEeccCCCCCCcceecCCCcHHHHHHHHHHHHHHH
Q psy15910 293 N---EWS--AEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYKQLVGIESRLT 367 (404)
Q Consensus 293 ~---~W~--~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG~~~p~f~~~~~~T~~~~~~l~~iE~rL~ 367 (404)
. .|. ....++||++|++... .++.++.++|||||+|.+++.+.....+..........+++...
T Consensus 164 ~~~~~~~~~~~~~l~GS~~~~~~~~-----------~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T 4fuu_A 164 PQFYEGKHKEEAWCLGSQYWSRNPH-----------VQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAK 232 (309)
T ss_dssp CTTCCSCCCGGGSCHHHHHHHHSCS-----------STTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhcchhHHHhccc-----------ccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHH
Confidence 1 111 1224789999986422 34678999999999999999876654332221222233445555
Q ss_pred HcCCCcccccCCccccccccccCCCCCCCCCCCCcC
Q psy15910 368 ARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFY 403 (404)
Q Consensus 368 ~~glL~~~~~~~~~~~~yF~~~~~~g~I~DDHiPFl 403 (404)
..+.. .+|... ..+.+.|||.||+
T Consensus 233 ~~~~~-----------~~~~~~-~~~~~~sDh~~F~ 256 (309)
T 4fuu_A 233 KAGYG-----------KTFIDE-RGDTITDDHLFIN 256 (309)
T ss_dssp HTTCT-----------TTEEEE-ECCCCCCHHHHHH
T ss_pred hcCCc-----------cccccc-CCCCCCCChHHHH
Confidence 54432 233332 2556789999985
No 6
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=1.5e-33 Score=277.14 Aligned_cols=195 Identities=27% Similarity=0.336 Sum_probs=157.6
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC----------CCCC
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS----------PFIG 250 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d----------~f~G 250 (404)
+++.++++||.++|+++|++|++|.|...++.....+..||||+++|..++.|+|+|||||++..+ .++|
T Consensus 45 ~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~G 124 (309)
T 3tc8_A 45 AAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDG 124 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECCCCSCCTTCSSGGGTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEecccCCCCCCCCccccCCCccccC
Confidence 667889999999999999999999998766522235689999999998788999999999998642 2489
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc-ccccCC---CCC-chhhHHHHHHHHhhhccccCccccc
Q psy15910 251 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA-FNEWSA---EDS-IWGARHLAAKWERSHLQHRGKTLTK 325 (404)
Q Consensus 251 A~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~-F~~W~~---~Dg-L~GSr~la~~~~~~~~p~~~~~~~~ 325 (404)
|+|+++|||+|||+||.|++. +++++|.|+||++||. +..|++ +|+ ++||++|++.+. .+
T Consensus 125 a~D~~sGva~~Le~ar~l~~~----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~-----------~~ 189 (309)
T 3tc8_A 125 ADDGGSGVGALLEIARQIGQK----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPH-----------VP 189 (309)
T ss_dssp TTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCS-----------ST
T ss_pred cccchHhHHHHHHHHHHHHhC----CCCCcEEEEEECccccccccccccccccccchhHHHHHhCCC-----------cc
Confidence 999999999999999999874 5899999999999996 677875 343 799999987543 23
Q ss_pred cCCccEEEEeccCCCCCCcceecCCCcHHHHH-HHHHHHHHHHHcCCCcccccCCccccccccccCCCCCCCCCCCCcC
Q psy15910 326 LDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYK-QLVGIESRLTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFY 403 (404)
Q Consensus 326 l~~I~~~IlLDmIG~~~p~f~~~~~~T~~~~~-~l~~iE~rL~~~glL~~~~~~~~~~~~yF~~~~~~g~I~DDHiPFl 403 (404)
+.++.++|||||+|.+++.|+.++.+ ..|.. .+..+++.++.+|. . .+|++.. .+.+.|||+||.
T Consensus 190 ~~~~~~~inlD~~G~~~~~~~~~~~~-~~~~~~l~~~~~~~a~~~g~----~-------~~f~~~~-~g~~~sDh~~f~ 255 (309)
T 3tc8_A 190 NYTAEYGILLDMVGGKNATFFKEQQS-LRAAAPIVEMVWSAARDLGY----G-------KYFINAA-GGAITDDHQYVI 255 (309)
T ss_dssp TCCCSEEEEEESCCBTTCCEEECHHH-HHHHHHHHHHHHHHHHHHTC----T-------TTEEEEE-CCCCCCHHHHHH
T ss_pred ccceEEEEEecccCCCCCceeecccc-cchHHHHHHHHHHHHHHcCC----c-------ceeccCC-CCCCCCccHHHH
Confidence 56899999999999999998887643 34444 34457777777763 2 5787653 678999999995
No 7
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.98 E-value=4.3e-32 Score=267.76 Aligned_cols=217 Identities=24% Similarity=0.316 Sum_probs=157.4
Q ss_pred ccchHHHHHHHhc--CCCcccccceeccccccccccChHhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEE
Q psy15910 145 FLNRDFFNERING--GFPKVLIEGIISDNKSALDMNTIENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNII 222 (404)
Q Consensus 145 ~in~~~~~~~l~~--~~~~~~~~gi~r~~~s~~~~~~~~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NII 222 (404)
.++.+++.+.+.. .++ +|...| +++.++++||+++|+++||+|++|.|...++.....+..|||
T Consensus 23 ~~~~~~~~~~l~~L~~~~-------~R~~gs-------~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvi 88 (314)
T 3gux_A 23 EFDADSAYQYIQVQADFG-------PRVPNT-------QAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNII 88 (314)
T ss_dssp CCCHHHHHHHHHHHHTTC-------CCCTTS-------HHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHccC-------CcCCCC-------HHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEE
Confidence 4577887777763 332 133333 678999999999999999999999997666522245689999
Q ss_pred EEeCCCCCceEEEEEecCCcCCCC----------CCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc-
Q psy15910 223 GHVNPTAPRALSLACHYDSKIMAS----------PFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA- 291 (404)
Q Consensus 223 a~l~g~a~~~IVLgAHYDSv~~~d----------~f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~- 291 (404)
|+++|..++.|||+|||||++..+ .++||+|+++|||+|||+||.|++. +++++|.|+||++||.
T Consensus 89 a~~~g~~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~----~~~~~i~fv~~~~EE~G 164 (314)
T 3gux_A 89 GAYKPESKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE----QPALGIDIVFFDSEDYG 164 (314)
T ss_dssp EEESTTCSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCCC-
T ss_pred EEECCCCCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC----CCCCcEEEEEECCcccc
Confidence 999998788999999999998631 2579999999999999999999874 5899999999999996
Q ss_pred ccccCC----CCC-chhhHHHHHHHHhhhccccCccccccCCccEEEEeccCCCCCCcceecCCCcHHHHH-HHHHHHHH
Q psy15910 292 FNEWSA----EDS-IWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLGTSNPRFYSYYPPTHKWYK-QLVGIESR 365 (404)
Q Consensus 292 F~~W~~----~Dg-L~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG~~~p~f~~~~~~T~~~~~-~l~~iE~r 365 (404)
++.|+. +|+ ++||++|++.+. .++.++.++|||||+|.+++.++.++.+ ..|.. .+..+++.
T Consensus 165 l~~~~~~~~~~ds~~~GS~~~~~~~~-----------~~~~~~~~~inlDm~G~~~~~~~~~g~~-~~~~~~l~~~~~~~ 232 (314)
T 3gux_A 165 IPEFYDGKYKQDTWCLGSQYWARTPH-----------VQNYNARYGILLDMVGGKDATFYYEGYS-ARTARSEMKKIWKK 232 (314)
T ss_dssp ----------CTTSCHHHHHHHHSCS-----------STTCCCSEEEEEESCCBTTCCEEECTTH-HHHCHHHHHHHHHH
T ss_pred ccccccccccccccchhHHHHHhCCc-----------ccccceeEEEEEeccCCCCCceeeeccc-cccHHHHHHHHHHH
Confidence 677875 344 799999987542 2357899999999999999998877653 34433 34456666
Q ss_pred HHHcCCCcccccCCccccccccccCCCCCCCCCCCCcC
Q psy15910 366 LTARGLLNMVNSNRSKKLTYFREMSTFPVAEDDHLPFY 403 (404)
Q Consensus 366 L~~~glL~~~~~~~~~~~~yF~~~~~~g~I~DDHiPFl 403 (404)
++.+|.- .||++.. .+.+.|||+||.
T Consensus 233 ~~~~g~~-----------~~f~~~~-~~~~~sDh~pF~ 258 (314)
T 3gux_A 233 AHELGYG-----------KYFVKED-GGETVDDHIYVN 258 (314)
T ss_dssp HHHHTCT-----------TTEEEEE-CCCCCCHHHHHH
T ss_pred HHHcCCc-----------ccccccc-CCCCCCccHHHH
Confidence 6766531 5777643 678999999995
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.88 E-value=2e-22 Score=194.20 Aligned_cols=138 Identities=17% Similarity=0.277 Sum_probs=115.3
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC-CCceEEEEEecCCcCCCCCCCCCCCCchHHH
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT-APRALSLACHYDSKIMASPFIGATDSAVPCA 259 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~-a~~~IVLgAHYDSv~~~d~f~GA~D~AsGvA 259 (404)
+++.++++||+++|+++|++++.+.+.... ....||||++++. ..+.|+|+|||||++. .+||.|+++|||
T Consensus 32 ~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~-----~~~~nvi~~~~g~~~~~~i~l~aH~D~v~~---g~Ga~D~~~g~a 103 (284)
T 1tkj_A 32 PGYKASVDYVKAKLDAAGYTTTLQQFTSGG-----ATGYNLIANWPGGDPNKVLMAGAHLDSVSS---GAGINDNGSGSA 103 (284)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEEEEETT-----EEEEEEEEECSCSEEEEEEEEEEECCCCTT---SCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEeccCC-----CCceeEEEEEeCCCCCCEEEEEeecCCCCC---CCCCccChHHHH
Confidence 678999999999999999999999864211 2257999999875 3468999999999986 469999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEeccCC
Q psy15910 260 MLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLG 339 (404)
Q Consensus 260 ~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG 339 (404)
++|++|+.|++.. .+++++|.|+||++||. ++.||+++++.+... .+++++++|++|++|
T Consensus 104 ~~l~~~~~l~~~~--~~~~~~i~~~~~~~EE~--------g~~Gs~~~~~~~~~~----------~~~~~~~~i~~D~~g 163 (284)
T 1tkj_A 104 AVLETALAVSRAG--YQPDKHLRFAWWGAEEL--------GLIGSKFYVNNLPSA----------DRSKLAGYLNFDMIG 163 (284)
T ss_dssp HHHHHHHHHHHTT--CCCSEEEEEEEESCGGG--------TSHHHHHHHHHSCHH----------HHTTEEEEEEECCCC
T ss_pred HHHHHHHHHHhcC--CCCCceEEEEEECCccc--------CCcCHHHHHhhCccc----------hhhcEEEEEEecCCC
Confidence 9999999998742 35789999999999997 889999999875432 346799999999999
Q ss_pred CCCCcce
Q psy15910 340 TSNPRFY 346 (404)
Q Consensus 340 ~~~p~f~ 346 (404)
..++.+.
T Consensus 164 ~~~~~~~ 170 (284)
T 1tkj_A 164 SPNPGYF 170 (284)
T ss_dssp CSSCCCE
T ss_pred CCCCCeE
Confidence 9876543
No 9
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.84 E-value=3.8e-20 Score=179.37 Aligned_cols=136 Identities=16% Similarity=0.237 Sum_probs=109.3
Q ss_pred HhHHHHHHHHHHHHHhCC--Ce-EEEEcccCccCCCCCceeeEEEEEeCCCC--CceEEEEEecCCcCC--CC---CCCC
Q psy15910 181 ENLLKIFQYIISELKSSG--LD-VETDTFSDTVPNFGRLTFTNIIGHVNPTA--PRALSLACHYDSKIM--AS---PFIG 250 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG--~~-Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a--~~~IVLgAHYDSv~~--~d---~f~G 250 (404)
+++.++++||.++|+++| ++ ++.+.+... .....||||+++|.. .+.|+++|||||++. .+ ..+|
T Consensus 40 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~-----~~~~~nvi~~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~G 114 (299)
T 1rtq_A 40 TSGAQASDWIASEWQALSASLPNASVKQVSHS-----GYNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPG 114 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEEEEEEEET-----TEEEEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCC
T ss_pred chHHHHHHHHHHHHHHhcCCcccceeeeeccC-----CCCCceEEEEEECCCCCCCEEEEEeccccCCCcCcCCCcccCC
Confidence 445688999999999986 44 667765321 123689999998763 468999999999972 11 1579
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCcc
Q psy15910 251 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMD 330 (404)
Q Consensus 251 A~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~ 330 (404)
|.|+++|||++||++|.|++.. .+++++|.|+||++||. ++.||+++++.+.. ++.+++
T Consensus 115 a~D~~~g~a~~l~~~~~l~~~~--~~~~~~i~~~~~~~EE~--------g~~Gs~~~~~~~~~-----------~~~~~~ 173 (299)
T 1rtq_A 115 ADDDASGIAAVTEVIRVLSENN--FQPKRSIAFMAYAAEEV--------GLRGSQDLANQYKS-----------EGKNVV 173 (299)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTT--CCCSEEEEEEEESCGGG--------TSHHHHHHHHHHHH-----------TTCEEE
T ss_pred CcccHHHHHHHHHHHHHHHHcC--CCCCceEEEEEECCccC--------CchhHHHHHHhhhh-----------ccccEE
Confidence 9999999999999999998742 46789999999999997 89999999988754 246799
Q ss_pred EEEEeccCCCCC
Q psy15910 331 MLVLLDLLGTSN 342 (404)
Q Consensus 331 ~~IlLDmIG~~~ 342 (404)
++|++||+|.++
T Consensus 174 ~~i~~D~~g~~g 185 (299)
T 1rtq_A 174 SALQLDMTNYKG 185 (299)
T ss_dssp EEEECSCCSCCC
T ss_pred EEEEecCCCCCC
Confidence 999999998753
No 10
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.84 E-value=1.6e-20 Score=192.43 Aligned_cols=134 Identities=18% Similarity=0.183 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhC-CCeEEEEcccCccCCCCCceeeEEEEEeCCCC--CceEEEEEecCCcCCCCCCCCCCCCchHHHHH
Q psy15910 185 KIFQYIISELKSS-GLDVETDTFSDTVPNFGRLTFTNIIGHVNPTA--PRALSLACHYDSKIMASPFIGATDSAVPCAML 261 (404)
Q Consensus 185 ~a~~yI~~~L~~l-G~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a--~~~IVLgAHYDSv~~~d~f~GA~D~AsGvA~L 261 (404)
+..+.|.+.++.- ..++.++.-... .+..+..||||+++|.. ++.|+++|||||++. .+||+|+++|||++
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~~~~---~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~---g~Ga~D~~sG~a~~ 277 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELGSER---RGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDE---GTGAIDDGAGVAIV 277 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEEEEE---EEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSS---SCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeeeE---cCCceeEEEEEEEeCCCCCCCEEEEEeecccCCC---CCCCccchHHHHHH
Confidence 3346676666542 233433321110 11345799999999874 578999999999975 47999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEeccCCCC
Q psy15910 262 LYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLGTS 341 (404)
Q Consensus 262 LElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG~~ 341 (404)
||+||.|++. +.+++++|+|+||++||. +++||++|++.+.. ++.++.++|++||+|.+
T Consensus 278 le~a~~l~~~--~~~~~~~i~f~~~~~EE~--------gl~Gs~~~~~~~~~-----------~~~~~~~~~n~D~~~~~ 336 (444)
T 3iib_A 278 TAAAKHILDL--PQKPERTIRVVLYAAEEL--------GLLGGKTYAKEHEA-----------ELEKHYIAAESDFGAGP 336 (444)
T ss_dssp HHHHHHHHTS--SSCCSEEEEEEEESCGGG--------TSHHHHHHHHHTGG-----------GGGGEEEEEECCSTTCC
T ss_pred HHHHHHHHhc--CCCCCCeEEEEEECCccc--------CCcCHHHHHHhhHh-----------hhhceeEEEECcCCCCc
Confidence 9999999874 146899999999999998 89999999987642 46789999999998876
Q ss_pred CCcc
Q psy15910 342 NPRF 345 (404)
Q Consensus 342 ~p~f 345 (404)
...|
T Consensus 337 ~~~~ 340 (444)
T 3iib_A 337 IYQI 340 (444)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 5443
No 11
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.80 E-value=1.1e-19 Score=184.35 Aligned_cols=127 Identities=25% Similarity=0.349 Sum_probs=99.8
Q ss_pred HHHHHHHHHHH--hCC---CeEEEEcccCccCCCCCceeeEEEEEeCCC-----CCceEEEEEecCCcCCCCCCCCCCCC
Q psy15910 185 KIFQYIISELK--SSG---LDVETDTFSDTVPNFGRLTFTNIIGHVNPT-----APRALSLACHYDSKIMASPFIGATDS 254 (404)
Q Consensus 185 ~a~~yI~~~L~--~lG---~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~-----a~~~IVLgAHYDSv~~~d~f~GA~D~ 254 (404)
+.+++|.++++ +.| +++..+. ....+..||||+++|. ..+.|+++|||||++. .+||+|+
T Consensus 172 ~~a~~L~~~l~~~~~g~~~v~l~~~~-------~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~---g~Ga~D~ 241 (421)
T 2ek8_A 172 QEGDALAANLRAGEKITATVKVAGAE-------VKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEK---APGANDD 241 (421)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEESCE-------EEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTT---CCCTTTT
T ss_pred HHHHHHHHHhhhhccCCccccccccc-------cccccccceEEEecCcccCCCCCCEEEEecccccCCC---CCCCCCC
Confidence 34677888884 222 2333332 1224479999999874 4578999999999986 4799999
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEE
Q psy15910 255 AVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVL 334 (404)
Q Consensus 255 AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~Il 334 (404)
++|||+|||+||.|++ .+++++|.|++|++||. +++||++|++.+.. ..++++.++|+
T Consensus 242 ~~G~a~~le~~~~l~~----~~~~~~i~~~~~~~EE~--------g~~Gs~~~~~~~~~----------~~~~~~~~~in 299 (421)
T 2ek8_A 242 ASGVAVTLELARVMSK----LKTDTELRFITFGAEEN--------GLIGSKKYAASLSE----------DEIKRTIGMFQ 299 (421)
T ss_dssp HHHHHHHHHHHHHHTT----SCCSSEEEEEEESSSTT--------TSHHHHHHHTTCCH----------HHHHHEEEEEE
T ss_pred cHhHHHHHHHHHHHhc----cCCCceEEEEEECCccc--------cchhHHHHHHhCcc----------chhhcEEEEEE
Confidence 9999999999999987 35789999999999997 89999999876432 13567999999
Q ss_pred eccCCCCCC
Q psy15910 335 LDLLGTSNP 343 (404)
Q Consensus 335 LDmIG~~~p 343 (404)
+||+|.++.
T Consensus 300 ~D~~g~~~~ 308 (421)
T 2ek8_A 300 LDMVGSKDA 308 (421)
T ss_dssp ECSCCBTTS
T ss_pred ecccCCCCC
Confidence 999999876
No 12
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.71 E-value=1.9e-17 Score=177.27 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=89.5
Q ss_pred ceeeEEEEEeCCC--CCceEEEEEecCCcCCCCCCCCCCCCchHHHHHHHHHHHHHHHh--hcCCCCcCEEEEEecCccc
Q psy15910 216 LTFTNIIGHVNPT--APRALSLACHYDSKIMASPFIGATDSAVPCAMLLYIARLMRQEL--SQLNQNLGLDLIFFDGEEA 291 (404)
Q Consensus 216 ~~~~NIIa~l~g~--a~~~IVLgAHYDSv~~~d~f~GA~D~AsGvA~LLElAr~L~~~l--~~~~~~~tI~fVfFdgEE~ 291 (404)
.+..||||+++|. .++.||++|||||+. +||+|+++|||+|||+||.|.+.. .+.+|+++|+|++|++||.
T Consensus 264 ~~~~NVi~~i~G~~~~~~~vvvgaH~Ds~~-----~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~ 338 (640)
T 3kas_A 264 IKILNIFGVIKGFVEPDHYVVVGAQRDAWG-----PGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDF 338 (640)
T ss_dssp EEEEEEEEEECCSSEEEEEEEEEEECCCSS-----CCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGG
T ss_pred eeEEEEEEEEeCCcCCCCceeeecccCCCC-----CCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCccc
Confidence 4589999999987 357999999999984 499999999999999999999852 2257899999999999997
Q ss_pred ccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEeccCCCCCCcc
Q psy15910 292 FNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLGTSNPRF 345 (404)
Q Consensus 292 F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG~~~p~f 345 (404)
+++||++|++.+... ..+++.++||+||+|..+..+
T Consensus 339 --------gl~GS~~~~~~~~~~----------l~~~~~a~iNlD~~~~G~~~l 374 (640)
T 3kas_A 339 --------GSVGATEWLEGYLSS----------LHLKAFTYINLDKAVLGTSNF 374 (640)
T ss_dssp --------TSHHHHHHHHHTTTT----------GGGTEEEEEECTTCBSCSSEE
T ss_pred --------CchhHHHHHHhhhhh----------hhhCEEEEEecccCccCCCce
Confidence 899999999864321 126899999999998765444
No 13
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.66 E-value=1.7e-16 Score=171.62 Aligned_cols=107 Identities=22% Similarity=0.227 Sum_probs=90.7
Q ss_pred ceeeEEEEEeCCCC--CceEEEEEecCCcCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh-cCCCCcCEEEEEecCcccc
Q psy15910 216 LTFTNIIGHVNPTA--PRALSLACHYDSKIMASPFIGATDSAVPCAMLLYIARLMRQELS-QLNQNLGLDLIFFDGEEAF 292 (404)
Q Consensus 216 ~~~~NIIa~l~g~a--~~~IVLgAHYDSv~~~d~f~GA~D~AsGvA~LLElAr~L~~~l~-~~~~~~tI~fVfFdgEE~F 292 (404)
.+..||||+++|.. ++.||++|||||++. ||.|+++|||+|||+||.|.+..+ +.+++++|+|++|++||.
T Consensus 310 ~~~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-----Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~- 383 (707)
T 3fed_A 310 TRIYNVVGTIRGSVEPDRYVILGGHRDSWVF-----GAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEF- 383 (707)
T ss_dssp EEEEEEEEEECCSSEEEEEEEEEEECCCSSS-----CTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG-
T ss_pred EEEEEEEEEEeCCCCCCceEEEeccccCCCC-----CCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccc-
Confidence 45889999999874 579999999999964 999999999999999999987532 247899999999999998
Q ss_pred cccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEeccCCCCCCcc
Q psy15910 293 NEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLGTSNPRF 345 (404)
Q Consensus 293 ~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG~~~p~f 345 (404)
++.||++|++.+... ..+++.++||+||.|.++..|
T Consensus 384 -------Gl~GS~~~~~~~~~~----------~~~~~~a~iNlD~~~~g~~~~ 419 (707)
T 3fed_A 384 -------GLLGSTEWAEENVKI----------LQERSIAYINSDSSIEGNYTL 419 (707)
T ss_dssp -------TSHHHHHHHHHHHHH----------HHHHEEEEEECSCSBSCSSEE
T ss_pred -------cchhHHHHHHhcchh----------hhhCEEEEEEecccccCCceE
Confidence 899999999876532 235799999999999876433
No 14
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.63 E-value=2.8e-15 Score=149.91 Aligned_cols=134 Identities=19% Similarity=0.239 Sum_probs=111.5
Q ss_pred cchHHHHHHHhc--CCCcccccceeccccccccccChHhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEE
Q psy15910 146 LNRDFFNERING--GFPKVLIEGIISDNKSALDMNTIENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIG 223 (404)
Q Consensus 146 in~~~~~~~l~~--~~~~~~~~gi~r~~~s~~~~~~~~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa 223 (404)
+|.+++.+.+.. .++..+.+|++|..+| ..+.++++||.++|+++|++++.|. .+||||
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s-------~~e~~~~~~l~~~l~~~g~~~~~d~------------~gnv~a 62 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFT-------AEERRAKDLVASYMREAGLFVYEDA------------AGNLIG 62 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTS-------HHHHHHHHHHHHHHHHHTCEEEECT------------TCCEEE
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCC-------HHHHHHHHHHHHHHHHCCCEEEEcC------------CCCEEE
Confidence 466777777774 5655555889999998 6789999999999999999998875 369999
Q ss_pred EeCCCC--CceEEEEEecCCcCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc--ccccCCCC
Q psy15910 224 HVNPTA--PRALSLACHYDSKIMASPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA--FNEWSAED 299 (404)
Q Consensus 224 ~l~g~a--~~~IVLgAHYDSv~~~d~f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~--F~~W~~~D 299 (404)
+++++. .+.|+|.||||++|. + |+.|+++|||++|++++.|++.. ..++.+|.|+|+.+||. |+.
T Consensus 63 ~~~g~~~~~~~i~l~aH~D~v~~--~--g~~d~~~g~a~~l~~~~~l~~~~--~~~~~~i~~~~~~~EE~~~~~~----- 131 (408)
T 3n5f_A 63 RKEGTNPDATVVLVGSHLDSVYN--G--GCFDGPLGVLAGVEVVQTMNEHG--VVTHHPIEVVAFTDEEGARFRF----- 131 (408)
T ss_dssp EECCSSTTSCEEEEEEESCCCTT--B--CSSTTHHHHHHHHHHHHHHHHTT--CCCSSCEEEEEESCSSCTTTTC-----
T ss_pred EecCCCCCCCEEEEEecCCCCCC--C--CccCCHHHHHHHHHHHHHHHHcC--CCCCCCEEEEEEcCccccccCC-----
Confidence 998764 479999999999986 2 89999999999999999999752 35789999999999995 322
Q ss_pred CchhhHHHHH
Q psy15910 300 SIWGARHLAA 309 (404)
Q Consensus 300 gL~GSr~la~ 309 (404)
++.||+++++
T Consensus 132 g~~Gs~~~~~ 141 (408)
T 3n5f_A 132 GMIGSRAMAG 141 (408)
T ss_dssp CCHHHHHHHT
T ss_pred CCcCHHHHHc
Confidence 6889999984
No 15
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.56 E-value=1.9e-14 Score=146.89 Aligned_cols=166 Identities=17% Similarity=0.211 Sum_probs=109.3
Q ss_pred cccccccCCCCCCccccccchHHHHHHHhc---CCCcccccceeccccccccccChHhHHHHH-HHHHHHHHhCCCeEEE
Q psy15910 128 DVNVLHCIPYPFPSVRTFLNRDFFNERING---GFPKVLIEGIISDNKSALDMNTIENLLKIF-QYIISELKSSGLDVET 203 (404)
Q Consensus 128 ~~~~~~~~~~~~p~~~~~in~~~~~~~l~~---~~~~~~~~gi~r~~~s~~~~~~~~~~~~a~-~yI~~~L~~lG~~Ve~ 203 (404)
+.+-||.+.+-.|-- ..++.+.+.+++-. .-.+++ -+|+ .++ .+|+ -|. .-..+.|++--++|.+
T Consensus 90 ~~~nLHv~~YS~pv~-~~l~l~eL~~hl~tlp~~PdaiP--Y~Ts-Yy~-~~wG------Fcl~~~~~~~L~~g~y~V~I 158 (435)
T 3k9t_A 90 KENNLHVMSYSVPVH-KTMTLDELKPYLHTIPGNKDRIP--YLTS-YYK-ENWG------FSLTQNKFDELCDDDYEVVI 158 (435)
T ss_dssp TTCGGGBCBTCCCEE-EEEEHHHHGGGEECCTTSTTCCB--CCBC-SSS-CCCC------EECCHHHHHTCCSSEEEEEE
T ss_pred cCCcceEEecccCcc-ceecHHHHHHHhcCCCCCCCccc--eeee-ccc-CCcc------eecCHHHHhhCCCCcEEEEE
Confidence 356689988876655 33466777777664 111111 0111 111 1111 000 1111223332356666
Q ss_pred EcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEE
Q psy15910 204 DTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMASPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDL 283 (404)
Q Consensus 204 d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d~f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~f 283 (404)
|+-. +| |..+..+++ ++|+.++.|+++||||+- . +|+|||||+|++||+||.|+. .+++++++|
T Consensus 159 dS~l--~~--G~l~y~e~~--ipG~t~~~IllsaH~cHP-~-----~ANDNaSG~a~lleLar~l~~----~~~~~t~rF 222 (435)
T 3k9t_A 159 DSSL--ED--GSLTYGEYY--IRGELEEEILLTTYTCHP-S-----MCNDNLSGVALITFIAKALSK----LKTKYSYRF 222 (435)
T ss_dssp EEEE--ES--CEEEEEEEE--ECCSSSCEEEEEEECCCC-S-----CTTTTHHHHHHHHHHHHHHTT----SCCSSEEEE
T ss_pred eeee--cC--CceEEEEEE--ecCCCCCEEEEEEEcCCC-C-----CCCccchHHHHHHHHHHHHhc----CCCCceEEE
Confidence 6532 33 656666666 588888999999999982 2 799999999999999999986 468999999
Q ss_pred EEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEeccCCCCCC
Q psy15910 284 IFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLGTSNP 343 (404)
Q Consensus 284 VfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG~~~p 343 (404)
+||+ +++||++|+.+.. ..+++|.++++|||+|..+.
T Consensus 223 vf~p------------g~iGS~~yl~~~~-----------~~l~~i~a~lnLDmVGd~~~ 259 (435)
T 3k9t_A 223 LFAP------------ETIGSITWLSRNE-----------DKLKNIKMGLVATCVGDAGI 259 (435)
T ss_dssp EEEC------------TTHHHHHHHHHCG-----------GGGGGEEEEEECCSCCSSSC
T ss_pred EEcC------------ccHHHHHHHHhCh-----------HhhhceEEEEEEEEecCCCC
Confidence 9997 3579999987532 24678999999999999875
No 16
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.54 E-value=8.3e-14 Score=127.18 Aligned_cols=112 Identities=15% Similarity=0.118 Sum_probs=92.3
Q ss_pred hHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCC--CceEEEEEecCCcCCC--------------
Q psy15910 182 NLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTA--PRALSLACHYDSKIMA-------------- 245 (404)
Q Consensus 182 ~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a--~~~IVLgAHYDSv~~~-------------- 245 (404)
++.++++||+++|+++|++++.+.+.. | ..|+|+++++.. .+.|+|.||||+||..
T Consensus 30 ~e~~~~~~l~~~l~~~g~~~~~~~~~~-----g---~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~ 101 (198)
T 1q7l_A 30 DYGAAVAFFEETARQLGLGCQKVEVAP-----G---YVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKD 101 (198)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEEEET-----T---EEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBC
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCC-----C---CeEEEEEEccCCCCCCeEEEEeeecccCCCcccCccCCCeeeEc
Confidence 467899999999999999998876431 2 479999997653 3689999999999862
Q ss_pred -CC---CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCC-chhhHHHHHHH
Q psy15910 246 -SP---FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDS-IWGARHLAAKW 311 (404)
Q Consensus 246 -d~---f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~Dg-L~GSr~la~~~ 311 (404)
++ ..|+.|+++|||++|++++.|++.. ..++.+|.|+|+.+||. + +.|++++++..
T Consensus 102 ~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~--------g~~~Ga~~~~~~~ 162 (198)
T 1q7l_A 102 SEGYIYARGAQDMKCVSIQYLEAVRRLKVEG--HRFPRTIHMTFVPDEEV--------GGHQGMELFVQRP 162 (198)
T ss_dssp TTSEEECTTTTTTHHHHHHHHHHHHHHHHTT--CCCSSCEEEEEESCGGG--------TSTTTHHHHTTSH
T ss_pred cCCEEEeCcchhchHHHHHHHHHHHHHHHcC--CCCCCCEEEEEEccccc--------CccccHHHHHHhH
Confidence 22 4789999999999999999998752 35778999999999996 4 78999987643
No 17
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.51 E-value=3.4e-13 Score=128.49 Aligned_cols=126 Identities=20% Similarity=0.198 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC-------CC--------
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS-------PF-------- 248 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d-------~f-------- 248 (404)
..+++||.++|+++|++++.+.+. + ..||+|++ +...+.|+|.+|||++|..+ +|
T Consensus 26 ~~~~~~l~~~l~~~G~~~~~~~~~------~---~~nv~a~~-g~~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~ 95 (269)
T 4h2k_A 26 EGCQQIIAERLEKLGFQIEWMPFN------D---TLNLWAKH-GTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGM 95 (269)
T ss_dssp TTHHHHHHHHHHTTTCEEEECCBT------T---BCEEEEEE-CSSSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTE
T ss_pred HHHHHHHHHHHHHcCCeEEEEEcC------C---ceEEEEEe-CCCCCEEEEEeeecccCCCCcccccCCCCCeEEECCE
Confidence 347899999999999999876532 1 57999998 55567899999999998632 22
Q ss_pred ---CCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCc-hhhHHHHHHHHhhhccccCcccc
Q psy15910 249 ---IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSI-WGARHLAAKWERSHLQHRGKTLT 324 (404)
Q Consensus 249 ---~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL-~GSr~la~~~~~~~~p~~~~~~~ 324 (404)
.|+.|+++|||++|++++.|.+.. ..++.+|.|+|+.+||. +. .||+++++.+...
T Consensus 96 ~~grG~~D~k~g~a~~l~a~~~l~~~~--~~~~~~i~~~~~~~EE~--------g~~~Ga~~~~~~~~~~---------- 155 (269)
T 4h2k_A 96 LYGRGAADMKGSLAAMIVAAEEYVKAN--PNHKGTIALLITSDEEA--------TAKDGTIHVVETLMAR---------- 155 (269)
T ss_dssp EESTTTTTTHHHHHHHHHHHHHHHHHC--TTCSSEEEEEEESCSSS--------CCTTSHHHHHHHHHHT----------
T ss_pred EEeCCcccChHHHHHHHHHHHHHHHhC--CCCCccEEEEEEecccc--------CcccCHHHHHHHHHhc----------
Confidence 699999999999999999998752 35678999999999996 44 5999999876543
Q ss_pred ccCCccEEEEeccCCC
Q psy15910 325 KLDRMDMLVLLDLLGT 340 (404)
Q Consensus 325 ~l~~I~~~IlLDmIG~ 340 (404)
..+.+++|++|..+.
T Consensus 156 -~~~~d~~i~~Ept~~ 170 (269)
T 4h2k_A 156 -DEKITYCMVGEPSSA 170 (269)
T ss_dssp -TCCCCEEEECCCCBS
T ss_pred -CCCCCEEEEECCCCC
Confidence 235788899887643
No 18
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.51 E-value=1.7e-13 Score=130.32 Aligned_cols=126 Identities=20% Similarity=0.237 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC-------CC--------
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS-------PF-------- 248 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d-------~f-------- 248 (404)
..+++||.++|+++|++++.+.+. + ..||||++ +...+.|+|.+|||++|..+ +|
T Consensus 26 ~~~~~~l~~~l~~~G~~~~~~~~~------~---~~nv~a~~-g~~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~ 95 (268)
T 3t68_A 26 AGCQDLMIERLKALGFEIESMVFE------D---TTNFWARR-GTQSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGF 95 (268)
T ss_dssp TTHHHHHHHHHHHTTCEECCCEET------T---EEC-CEEE-CSSSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTE
T ss_pred hHHHHHHHHHHHHCCCeEEEEecC------C---ccEEEEEe-CCCCCeEEEEccccccCCCCcccCCCCCCccEEECCE
Confidence 346899999999999998765432 1 57999998 55567899999999998642 23
Q ss_pred ---CCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCc-hhhHHHHHHHHhhhccccCcccc
Q psy15910 249 ---IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSI-WGARHLAAKWERSHLQHRGKTLT 324 (404)
Q Consensus 249 ---~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL-~GSr~la~~~~~~~~p~~~~~~~ 324 (404)
.|+.|+++|||++|++++.|.+.. ..++.+|.|+|+.+||. +. .||+++++.+.+.
T Consensus 96 ~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~--------g~~~Ga~~~~~~~~~~---------- 155 (268)
T 3t68_A 96 LHGRGAADMKGSLACMIVAVERFIAEH--PDHQGSIGFLITSDEEG--------PFINGTVRVVETLMAR---------- 155 (268)
T ss_dssp EESTTTTTTHHHHHHHHHHHHHHHHHC--TTCSSEEEEEEESCTTS--------SSCCHHHHHHHHHHHT----------
T ss_pred EEecCcccchHHHHHHHHHHHHHHHhC--CCCCCcEEEEEEeCCcc--------CcccCHHHHHHHHHhc----------
Confidence 599999999999999999998752 35678999999999996 44 5999999876543
Q ss_pred ccCCccEEEEeccCCC
Q psy15910 325 KLDRMDMLVLLDLLGT 340 (404)
Q Consensus 325 ~l~~I~~~IlLDmIG~ 340 (404)
..+.+++|.+|..+.
T Consensus 156 -~~~~d~~i~~ept~~ 170 (268)
T 3t68_A 156 -NELIDMCIVGEPSST 170 (268)
T ss_dssp -TCCCCEEEECSCCBS
T ss_pred -CCCCCEEEEeCCCCC
Confidence 235789999987643
No 19
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.48 E-value=2.6e-13 Score=135.91 Aligned_cols=134 Identities=18% Similarity=0.243 Sum_probs=105.3
Q ss_pred hHHHHHHHhc--CCCcccccceeccccccccccChHhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEe
Q psy15910 148 RDFFNERING--GFPKVLIEGIISDNKSALDMNTIENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHV 225 (404)
Q Consensus 148 ~~~~~~~l~~--~~~~~~~~gi~r~~~s~~~~~~~~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l 225 (404)
.+++.+.+.. .++.....|++|..++ .++.++++||.++|+++|++++.+. ..||||++
T Consensus 8 ~~~~~~~l~~lv~i~s~s~~g~~~~~~s-------~~e~~~~~~i~~~l~~~G~~v~~~~------------~gnv~a~~ 68 (423)
T 1z2l_A 8 RQAIEETLPWLSSFGADPAGGMTRLLYS-------PEWLETQQQFKKRMAASGLETRFDE------------VGNLYGRL 68 (423)
T ss_dssp HHHHHHHHHHHHHTTBCTTSSBCCCTTS-------HHHHHHHHHHHHHHHHTTCEEEECT------------TSCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCcccCcCC-------HHHHHHHHHHHHHHHHcCCEEEEec------------CCcEEEEE
Confidence 4555555553 3443334567777766 6789999999999999999988765 35999999
Q ss_pred CCCC--CceEEEEEecCCcCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc--ccccCCCCCc
Q psy15910 226 NPTA--PRALSLACHYDSKIMASPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA--FNEWSAEDSI 301 (404)
Q Consensus 226 ~g~a--~~~IVLgAHYDSv~~~d~f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~--F~~W~~~DgL 301 (404)
+++. .+.|+|.||||++|.. |+.|+..|+|++|++++.|++.. .+++.+|.|+|+.+||. |. .++
T Consensus 69 ~g~~~~~~~i~l~~H~D~Vp~~----g~~D~k~g~a~~l~a~~~l~~~~--~~~~~~v~~i~~~~EE~~~~~-----~g~ 137 (423)
T 1z2l_A 69 NGTEYPQEVVLSGSHIDTVVNG----GNLDGQFGALAAWLAIDWLKTQY--GAPLRTVEVVAMAEEEGSRFP-----YVF 137 (423)
T ss_dssp CCSSEEEEEEEEEEECCCCTTB----CSSTTHHHHHHHHHHHHHHHHHH--CSCSEEEEEEEESCSSCCSSS-----CSC
T ss_pred cCCCCCCCEEEEEEecCCCCCC----CccCCHHHHHHHHHHHHHHHHcC--CCCCCCEEEEEEcCccccccC-----CCc
Confidence 8653 3689999999999862 88999999999999999998863 45788999999999996 22 167
Q ss_pred hhhHHHHHHH
Q psy15910 302 WGARHLAAKW 311 (404)
Q Consensus 302 ~GSr~la~~~ 311 (404)
.||++++..+
T Consensus 138 ~Gs~~~~~~~ 147 (423)
T 1z2l_A 138 WGSKNIFGLA 147 (423)
T ss_dssp HHHHHHTTCC
T ss_pred ccHHHHHcCC
Confidence 8999988643
No 20
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.42 E-value=1.1e-12 Score=134.28 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=97.3
Q ss_pred ccceeccccccccccChHhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCC-CceEEEEEecCCc
Q psy15910 164 IEGIISDNKSALDMNTIENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTA-PRALSLACHYDSK 242 (404)
Q Consensus 164 ~~gi~r~~~s~~~~~~~~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a-~~~IVLgAHYDSv 242 (404)
.+|++|..++ .++.++++||.++|+++|++++.+. .+||+|++++.. .+.|+|.||||+|
T Consensus 57 ~~g~~r~~~s-------~~e~~~~~~l~~~l~~~G~~v~~d~------------~gnvia~~~g~~~~~~i~l~~H~DtV 117 (474)
T 2v8h_A 57 EFGMRRLAGT-------ALDGAMRDWFTNECESLGCKVKVDK------------IGNMFAVYPGKNGGKPTATGSHLDTQ 117 (474)
T ss_dssp CCEECCCTTS-------HHHHHHHHHHHHHHHHTTCEEEEBT------------TCCEEEEECCSSCCSCEEEEECCCCC
T ss_pred cCCcccCCCC-------HHHHHHHHHHHHHHHHcCCEEEEec------------CceEEEEECCCCCCCeEEEEEecccC
Confidence 4678888777 6789999999999999999988754 369999997653 3489999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc--ccccCCCCCchhhHHHHH
Q psy15910 243 IMASPFIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA--FNEWSAEDSIWGARHLAA 309 (404)
Q Consensus 243 ~~~d~f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~--F~~W~~~DgL~GSr~la~ 309 (404)
|.. |..|+..|+|++|++++.|++.. .+++.+|.|+|+.+||. |.. ++.||++++.
T Consensus 118 p~~----g~~D~k~gvaa~L~a~~~L~~~~--~~~~~~v~lif~~dEE~~~~~~-----g~~Gs~~l~~ 175 (474)
T 2v8h_A 118 PEA----GKYDGILGVLAGLEVLRTFKDNN--YVPNYDVCVVVWFNAEGARFAR-----SCTGSSVWSH 175 (474)
T ss_dssp SSB----CSSTTHHHHHHHHHHHHHHHHHT--CCCSSCEEEEECTTCSCSSSSC-----TTHHHHHHTT
T ss_pred CCC----CCcCCHHHHHHHHHHHHHHHHcC--CCCCCCEEEEEECCccCCCCCC-----CcccHHHHHh
Confidence 863 77899999999999999999862 45688999999999996 322 6789999975
No 21
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.42 E-value=2.4e-12 Score=127.80 Aligned_cols=115 Identities=22% Similarity=0.300 Sum_probs=92.2
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC-----C--------
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS-----P-------- 247 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d-----~-------- 247 (404)
++..++++||.++|+++|++++.+..... + ...||++++++..++.|+|.||||++|..+ +
T Consensus 39 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~~----~--~~~~v~a~~~g~~~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l 112 (393)
T 1cg2_A 39 EGIAAAGNFLEAELKNLGFTVTRSKSAGL----V--VGDNIVGKIKGRGGKNLLLMSHMDTVYLKGILAKAPFRVEGDKA 112 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSTT----C--CSEEEEEEEECSSCCCEEEEEECCBSCCTTHHHHSCCEEETTEE
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEecCcC----C--CCCeEEEEECCCCCceEEEEEecCcCCCCCccccCCeeeeCCEE
Confidence 45678999999999999999988763210 0 025999999865557899999999997532 1
Q ss_pred -CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHH
Q psy15910 248 -FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKW 311 (404)
Q Consensus 248 -f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~ 311 (404)
..|+.|+.+|+|++|++++.|++.. ..+..+|.|+|..+||. +..|++++++..
T Consensus 113 ~grG~~D~k~~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~--------g~~G~~~~~~~~ 167 (393)
T 1cg2_A 113 YGPGIADDKGGNAVILHTLKLLKEYG--VRDYGTITVLFNTDEEK--------GSFGSRDLIQEE 167 (393)
T ss_dssp ECTTTTTTHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEESCGGG--------TTTTTHHHHHHH
T ss_pred EcCCcccchHHHHHHHHHHHHHHhcC--CCCCCCEEEEEEccccc--------CCccHHHHHHHH
Confidence 3799999999999999999998752 34556999999999997 667999998754
No 22
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.41 E-value=3.1e-12 Score=130.08 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=102.0
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCC-c-eeeEEEEEeCCC-CCceEEEEEecCCcCCCC-----------
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGR-L-TFTNIIGHVNPT-APRALSLACHYDSKIMAS----------- 246 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~-~-~~~NIIa~l~g~-a~~~IVLgAHYDSv~~~d----------- 246 (404)
+++.++++||+++|+++|++++.+.+.......|. . ...||||++.+. ..+.|+|.+|||++|..+
T Consensus 43 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 122 (479)
T 2zog_A 43 GEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTL 122 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred hHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcc
Confidence 35688999999999999999998874211000110 0 017999999764 357899999999998621
Q ss_pred ----C---CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhcccc
Q psy15910 247 ----P---FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHR 319 (404)
Q Consensus 247 ----~---f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~ 319 (404)
+ ..|+.|+++|+|++|++++.|.+.. .+++.+|.|+|+.+||. +..||+++++.....
T Consensus 123 ~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~--------g~~Ga~~~~~~~~~~----- 187 (479)
T 2zog_A 123 VEREGKLYGRGSTDDKGPVAGWMNALEAYQKTG--QEIPVNLRFCLEGMEES--------GSEGLDELIFAQKDK----- 187 (479)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEESCGGG--------TCTTHHHHHHHTTTT-----
T ss_pred eeECCEEEeeccccChHHHHHHHHHHHHHHHhC--CCCCCcEEEEEeccccc--------CCccHHHHHHhhhhh-----
Confidence 1 3788999999999999999998752 35678999999999997 667999988753211
Q ss_pred CccccccCCccEEEEecc
Q psy15910 320 GKTLTKLDRMDMLVLLDL 337 (404)
Q Consensus 320 ~~~~~~l~~I~~~IlLDm 337 (404)
.+.+++++|++|.
T Consensus 188 -----~~~~~d~~i~~e~ 200 (479)
T 2zog_A 188 -----FFKDVDYVCISDN 200 (479)
T ss_dssp -----TTTTCCEEEECCC
T ss_pred -----hcccCCEEEEeCC
Confidence 1335777787774
No 23
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.33 E-value=5.2e-12 Score=124.21 Aligned_cols=111 Identities=18% Similarity=0.248 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC--CCceEEEEEecCCcCCCCC-----------CC
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT--APRALSLACHYDSKIMASP-----------FI 249 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~--a~~~IVLgAHYDSv~~~d~-----------f~ 249 (404)
+.++++||.++|+++|++++.+.....+. . ...||||+++++ ..+.|+|.||||++|..++ ..
T Consensus 25 e~~~~~~l~~~l~~~G~~v~~~~~~~~~~-~---~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~ 100 (373)
T 3gb0_A 25 EAEICKVLTKKFTDLGVEVFEDDTMAVTG-H---GAGNLICTLPATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSD 100 (373)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSCHHHHC-C---SSCCEEEEECCSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECC
T ss_pred HHHHHHHHHHHHHHCCCEEEEeccccccC-C---CceeEEEEecCCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECC
Confidence 47899999999999999998876311000 0 147999999875 4578999999999975321 35
Q ss_pred CC----CCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHH
Q psy15910 250 GA----TDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLA 308 (404)
Q Consensus 250 GA----~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la 308 (404)
|+ .|++.|+|++|++++.|++. ..++.+|.|+|+.+||. ++.||+++.
T Consensus 101 G~~~~g~D~k~g~a~~l~a~~~l~~~---~~~~~~v~~~~~~~EE~--------g~~Ga~~~~ 152 (373)
T 3gb0_A 101 GTTILGADDKAGLASMFEAIRVLKEK---NIPHGTIEFIITVGEES--------GLVGAKALD 152 (373)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHT---TCCCCCEEEEEESCGGG--------TSHHHHHSC
T ss_pred CccccCcccHHHHHHHHHHHHHHHhc---CCCCCCEEEEEEecccc--------CchhhhhhC
Confidence 76 49999999999999999875 34678999999999997 678998873
No 24
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.33 E-value=1.8e-11 Score=125.02 Aligned_cols=112 Identities=19% Similarity=0.197 Sum_probs=91.6
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC--CCceEEEEEecCCcCCCC------------
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT--APRALSLACHYDSKIMAS------------ 246 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~--a~~~IVLgAHYDSv~~~d------------ 246 (404)
++..++++||.++|+++|++++.+.. .+ ..||+|++++. ..+.|+|.||||++|..+
T Consensus 64 ~~~~~~~~~l~~~l~~~G~~~~~~~~------~~---~~~v~a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~ 134 (481)
T 2pok_A 64 VGLKEVANYLGEIFKRVGAEVEIDES------YT---APFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLS 134 (481)
T ss_dssp TTHHHHHHHHHHHHHHTTCEEEEECS------SS---SCEEEEEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCE
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEecC------CC---CcEEEEEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCce
Confidence 35688999999999999999988752 11 48999999753 457899999999998632
Q ss_pred ---C---CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHH
Q psy15910 247 ---P---FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKW 311 (404)
Q Consensus 247 ---~---f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~ 311 (404)
+ ..|+.|+.+|||++|++++.|++.. ..++.+|.|+|+.+||. +..|+++++...
T Consensus 135 ~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~--------g~~g~~~~~~~~ 195 (481)
T 2pok_A 135 VRNGFMYGRGVDDDKGHITARLSALRKYMQHH--DDLPVNISFIMEGAEES--------ASTDLDKYLEKH 195 (481)
T ss_dssp EETTEEESTTTTTTHHHHHHHHHHHHHHHHTC--SSCSSEEEEEEESCGGG--------TTTTHHHHHHHH
T ss_pred eeCCeEEccccccCcHHHHHHHHHHHHHHHhc--CCCCCCEEEEEeccccc--------CchhHHHHHHHh
Confidence 1 3789999999999999999999752 35678999999999997 667998887653
No 25
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.32 E-value=4.7e-12 Score=127.87 Aligned_cols=130 Identities=16% Similarity=0.220 Sum_probs=98.1
Q ss_pred HHHHHHHhc--CCCcccccceeccccccccccChHhHHHHHHHHHHHHHhCCCe-EEEEcccCccCCCCCceeeEEEEEe
Q psy15910 149 DFFNERING--GFPKVLIEGIISDNKSALDMNTIENLLKIFQYIISELKSSGLD-VETDTFSDTVPNFGRLTFTNIIGHV 225 (404)
Q Consensus 149 ~~~~~~l~~--~~~~~~~~gi~r~~~s~~~~~~~~~~~~a~~yI~~~L~~lG~~-Ve~d~F~~~tp~~G~~~~~NIIa~l 225 (404)
+++.+.+.. .++.....+.+|..++ +++.++++||.++|+++|++ ++.|. ..||||++
T Consensus 27 ~~~~~~l~~lv~i~s~s~~~~~~~~~~-------~~e~~~~~~l~~~l~~~G~~~~~~d~------------~~nv~a~~ 87 (434)
T 3ife_A 27 EELIERFTRYVKIDTQSNEDSHTVPTT-------PGQIEFGKLLVEELKEVGLTEVTMDD------------NGYVMATL 87 (434)
T ss_dssp HHHHHHHHHHHTSCCBCCTTCCSSSSS-------HHHHHHHHHHHHHHHHHTCEEEEECT------------TSCEEEEE
T ss_pred HHHHHHHHhhEEeeccCCCccCCCCCC-------HHHHHHHHHHHHHHHHcCCceEEECC------------CcEEEEEe
Confidence 445555553 4544434455565555 67899999999999999997 88865 47999999
Q ss_pred CCCC---CceEEEEEecCCcCCC-C----C-----C----------------------------------CC----CCCC
Q psy15910 226 NPTA---PRALSLACHYDSKIMA-S----P-----F----------------------------------IG----ATDS 254 (404)
Q Consensus 226 ~g~a---~~~IVLgAHYDSv~~~-d----~-----f----------------------------------~G----A~D~ 254 (404)
+++. .+.|+|.+|+|+||.. . + + .| +.|+
T Consensus 88 ~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~ 167 (434)
T 3ife_A 88 PANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADD 167 (434)
T ss_dssp CCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHH
T ss_pred CCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhh
Confidence 8653 4789999999999741 1 1 1 12 4888
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHH
Q psy15910 255 AVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLA 308 (404)
Q Consensus 255 AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la 308 (404)
++|+|++|++++.|.+.. ..++.+|.|+|..+||. + .|++++.
T Consensus 168 K~gva~~l~a~~~L~~~~--~~~~~~i~~if~~~EE~--------g-~Ga~~~~ 210 (434)
T 3ife_A 168 KAGLTEIMVAMNYLIHNP--QIKHGKIRVAFTPDEEI--------G-RGPAHFD 210 (434)
T ss_dssp HHHHHHHHHHHHHHHTCT--TSCBCCEEEEEESCGGG--------T-CTGGGCC
T ss_pred HHHHHHHHHHHHHHHhCC--CCCCCCEEEEEECCccc--------C-hHHHHhh
Confidence 999999999999998741 35678999999999997 5 6888763
No 26
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.31 E-value=2.2e-11 Score=120.97 Aligned_cols=111 Identities=17% Similarity=0.134 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC---------------C-
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS---------------P- 247 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d---------------~- 247 (404)
.++++||.++|+++|++++...+. ...||+|++ ++..+.|+|.||||++|..+ +
T Consensus 26 ~~~~~~l~~~l~~~G~~~~~~~~~---------~~~nv~a~~-g~~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~ 95 (393)
T 1vgy_A 26 RDCQKLMAERLHKIGFAAEEMHFG---------NTKNIWLRR-GTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGR 95 (393)
T ss_dssp TTHHHHHHHHHHTTTCEEEECCBT---------TBCEEEEEE-CSSSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTE
T ss_pred HHHHHHHHHHHHHcCCcEEEEecC---------CCcEEEEEE-CCCCCEEEEEcccCCcCCCCcccCCCCCCceEEECCE
Confidence 457899999999999998875431 157999999 55557899999999998642 1
Q ss_pred --CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHh
Q psy15910 248 --FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWER 313 (404)
Q Consensus 248 --f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~ 313 (404)
..|+.|+..|+|++|++++.|.+.. ..++.+|.|+|+.+||.- ++.|++++++.+..
T Consensus 96 l~grG~~D~k~~~aa~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~~-------~~~Ga~~~~~~~~~ 154 (393)
T 1vgy_A 96 LYGRGAADMKTSIACFVTACERFVAKH--PNHQGSIALLITSDEEGD-------ALDGTTKVVDVLKA 154 (393)
T ss_dssp EESTTTTTTHHHHHHHHHHHHHHHHHC--TTCSSEEEEEEESCSSSC-------CTTSHHHHHHHHHH
T ss_pred EEecCcccchHHHHHHHHHHHHHHHhc--CCCCCcEEEEEEeccccC-------CcCCHHHHHHHHHh
Confidence 3788999999999999999998752 357789999999999951 46899999876543
No 27
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.30 E-value=6e-12 Score=125.27 Aligned_cols=117 Identities=20% Similarity=0.202 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC-CCceEEEEEecCCcCC------------------
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT-APRALSLACHYDSKIM------------------ 244 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~-a~~~IVLgAHYDSv~~------------------ 244 (404)
.++++||+++|+++|++++.|. .+||||++.++ ..+.|+|+||+|++++
T Consensus 27 ~~~~~~l~~~l~~~g~~~~~d~------------~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg 94 (373)
T 1vhe_A 27 REVRQVMKSYIEPFADEVTTDR------------LGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGG 94 (373)
T ss_dssp HHHHHHHHHHHGGGCSEEEECT------------TCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTSCEEEEEESC
T ss_pred HHHHHHHHHHHHhhCCEEEEcC------------CCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCCeEEEEEeCC
Confidence 5789999999999999988875 47999998765 4578999999999982
Q ss_pred ---------------CC-----------C----------------------------------CCC--------------
Q psy15910 245 ---------------AS-----------P----------------------------------FIG-------------- 250 (404)
Q Consensus 245 ---------------~d-----------~----------------------------------f~G-------------- 250 (404)
.+ + .+|
T Consensus 95 ~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~ 174 (373)
T 1vhe_A 95 WWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNN 174 (373)
T ss_dssp CCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSS
T ss_pred cchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecC
Confidence 00 0 012
Q ss_pred -------CCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccc
Q psy15910 251 -------ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTL 323 (404)
Q Consensus 251 -------A~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~ 323 (404)
+.|+++|||++|++++.|++. .++.+|.|+|+++||. ++.||++++..+
T Consensus 175 ~~~i~gr~~D~k~g~a~~l~a~~~l~~~----~~~~~v~~~~~~~EE~--------G~~G~~~~~~~~------------ 230 (373)
T 1vhe_A 175 EKFLLAKAWDNRIGCAIAIDVLRNLQNT----DHPNIVYGVGTVQEEV--------GLRGAKTAAHTI------------ 230 (373)
T ss_dssp TTEEEETTHHHHHHHHHHHHHHHHHHTS----CCSSEEEEEEESCCTT--------TSHHHHHHHHHH------------
T ss_pred CCeEEeccCccHHHHHHHHHHHHHHhhc----CCCceEEEEEECCccc--------ChhhHHHHhccc------------
Confidence 899999999999999999863 3668999999999997 778999886432
Q ss_pred cccCCccEEEEeccCCC
Q psy15910 324 TKLDRMDMLVLLDLLGT 340 (404)
Q Consensus 324 ~~l~~I~~~IlLDmIG~ 340 (404)
+.+++|++|+.+.
T Consensus 231 ----~~d~~i~~d~~~~ 243 (373)
T 1vhe_A 231 ----QPDIAFGVDVGIA 243 (373)
T ss_dssp ----CCSEEEEEEEEEC
T ss_pred ----CCCEEEEEecccc
Confidence 2467788887654
No 28
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.28 E-value=1.6e-11 Score=120.88 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCC-C-CCceEEEEEecCCcCCCC-------------C-
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNP-T-APRALSLACHYDSKIMAS-------------P- 247 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g-~-a~~~IVLgAHYDSv~~~d-------------~- 247 (404)
.++++||.++|+++|++++.+ ..||+|++++ . ..+.|+|.||||++|..+ +
T Consensus 31 ~~~~~~l~~~l~~~g~~~~~~-------------~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~ 97 (356)
T 3ct9_A 31 TQAADFLQNYIEAEGMQTGRK-------------GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGK 97 (356)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE-------------TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------CCCEECSSE
T ss_pred HHHHHHHHHHHHHCCCeEEEE-------------eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCCCccEEECCE
Confidence 578899999999999998876 2799999976 3 357899999999998632 2
Q ss_pred --CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHH
Q psy15910 248 --FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 310 (404)
Q Consensus 248 --f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~ 310 (404)
..|+.|+++|+|++|++++.|++. . ++.+|.|+|+.+||.. ++.||+++++.
T Consensus 98 ~~g~G~~D~k~g~a~~l~a~~~l~~~---~-~~~~v~~~~~~~EE~~-------g~~G~~~~~~~ 151 (356)
T 3ct9_A 98 LYGLGSNDAGASVVSLLQVFLQLCRT---S-QNYNLIYLASCEEEVS-------GKEGIESVLPG 151 (356)
T ss_dssp EESTTTTTTHHHHHHHHHHHHHHTTS---C-CSSEEEEEEECCGGGT-------CTTTHHHHGGG
T ss_pred EEecCcccchHHHHHHHHHHHHHHhc---C-CCCCEEEEEEeCcccC-------CccCHHHHHhh
Confidence 478999999999999999999874 3 7889999999999941 46799988754
No 29
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.27 E-value=7.4e-11 Score=120.87 Aligned_cols=137 Identities=19% Similarity=0.230 Sum_probs=102.0
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCc-cCCCCCc--eeeEEEEEeCCC-CCceEEEEEecCCcCCCC-------C--
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDT-VPNFGRL--TFTNIIGHVNPT-APRALSLACHYDSKIMAS-------P-- 247 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~-tp~~G~~--~~~NIIa~l~g~-a~~~IVLgAHYDSv~~~d-------~-- 247 (404)
.++.++++||.++|+++|++++.+..... .+ .|.. ...||+|++.+. ..+.|+|.+|||++|..+ +
T Consensus 50 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~-~g~~~~~~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~ 128 (485)
T 3dlj_A 50 QELFRMMAVAADTLQRLGARVASVDMGPQQLP-DGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYV 128 (485)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCEEEC---CCEEECCCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTS
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEecCccccc-CCCccCCCcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCc
Confidence 34678999999999999999988763210 00 0100 025899999754 357899999999998631 1
Q ss_pred ---------CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccc
Q psy15910 248 ---------FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQH 318 (404)
Q Consensus 248 ---------f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~ 318 (404)
..|+.|+++|+|++|++++.|++.. ..++.+|.|+|..+||. +..|++++++....
T Consensus 129 ~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~--------g~~g~~~~~~~~~~----- 193 (485)
T 3dlj_A 129 LTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE--QDLPVNIKFIIEGMEEA--------GSVALEELVEKEKD----- 193 (485)
T ss_dssp CEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEESCGGG--------TTTTHHHHHHHHTT-----
T ss_pred cEEECCEEEecccccCcHHHHHHHHHHHHHHHhC--CCCCccEEEEEEccccc--------CCccHHHHHHhhhh-----
Confidence 3899999999999999999998752 35678999999999996 55699998875421
Q ss_pred cCccccccCCccEEEEeccC
Q psy15910 319 RGKTLTKLDRMDMLVLLDLL 338 (404)
Q Consensus 319 ~~~~~~~l~~I~~~IlLDmI 338 (404)
..+++++++|.+|..
T Consensus 194 -----~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 194 -----RFFSGVDYIVISDNL 208 (485)
T ss_dssp -----TTSTTCCEEEECCCB
T ss_pred -----hcccCCCEEEEcCCC
Confidence 113568888888853
No 30
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.27 E-value=1.9e-11 Score=121.71 Aligned_cols=111 Identities=23% Similarity=0.298 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC----CCceEEEEEecCCcCCCC---------C--
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT----APRALSLACHYDSKIMAS---------P-- 247 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~----a~~~IVLgAHYDSv~~~d---------~-- 247 (404)
+.++++||+++|+++|++++.+.+...+. ....||||+++++ ..+.|+|.||||++|..+ +
T Consensus 43 E~~~~~~l~~~l~~~G~~v~~~~~~~~~~----~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~ 118 (396)
T 3rza_A 43 ESTIQPILKEKFIALGLDVKEDEAAKHPK----LGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYI 118 (396)
T ss_dssp TTTHHHHHHHHHHHTTCEEEECSGGGSTT----CSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEeccccccC----CCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEE
Confidence 36788999999999999999876432111 1147999999874 457899999999997432 2
Q ss_pred -CCCC----CCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHH
Q psy15910 248 -FIGA----TDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLA 308 (404)
Q Consensus 248 -f~GA----~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la 308 (404)
..|+ .|+++|+|++|++++.|++. ..++.+|.|+|+.+||. ++.||+++.
T Consensus 119 ~g~G~~~~g~D~k~g~a~~l~a~~~l~~~---~~~~~~v~~~~~~~EE~--------g~~Ga~~~~ 173 (396)
T 3rza_A 119 YSDGTTILGADDKAGLAAMLEVLQVIKEQ---QIPHGQIQFVITVGEES--------GLIGAKELN 173 (396)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHHH---TCCCCCEEEEEESCGGG--------TSHHHHHCC
T ss_pred ECCCccccCcccHHHHHHHHHHHHHHHhc---CCCCCCEEEEEEccccc--------ccHhHhhhc
Confidence 4576 49999999999999999875 34578999999999997 678998874
No 31
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.25 E-value=8.6e-11 Score=114.68 Aligned_cols=111 Identities=21% Similarity=0.148 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC---------------C-
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS---------------P- 247 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d---------------~- 247 (404)
.++++||.++|+++|++++..... + ..|+||++ +...+.|+|.||||++|..+ +
T Consensus 23 ~~~~~~l~~~l~~~g~~~~~~~~~------~---~~n~~a~~-g~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~ 92 (377)
T 3isz_A 23 EGCQQIIAERLEKLGFQIEWMPFN------D---TLNLWAKH-GTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGM 92 (377)
T ss_dssp TTHHHHHHHHHHHTTCEEEECCBT------T---BCEEEEEE-ESSSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTE
T ss_pred hhHHHHHHHHHHHCCCceEEeecC------C---CceEEEEe-CCCCCEEEEeccccccCCCCcccCCCCCCCcEEECCE
Confidence 457899999999999998865321 1 58999998 55567899999999998631 2
Q ss_pred --CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHh
Q psy15910 248 --FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWER 313 (404)
Q Consensus 248 --f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~ 313 (404)
..|+.|+..|++++|++++.|.+.. ..++.+|.|+|..+||.- +..||+++++.+..
T Consensus 93 ~~g~G~~D~k~g~~~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~~-------~~~G~~~~~~~~~~ 151 (377)
T 3isz_A 93 LYGRGAADMKGSLAAMIVAAEEYVKAN--PNHKGTIALLITSDEEAT-------AKDGTIHVVETLMA 151 (377)
T ss_dssp EESTTTTTTHHHHHHHHHHHHHHHHHC--TTCSSEEEEEEESCSSSC-------CSSSHHHHHHHHHH
T ss_pred EEeCChhhhhHHHHHHHHHHHHHHHhC--CCCCceEEEEEEcccccC-------ccccHHHHHHHHHh
Confidence 4688899999999999999988752 456789999999999961 23699999876643
No 32
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.24 E-value=1e-11 Score=122.40 Aligned_cols=115 Identities=23% Similarity=0.272 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCC----------------CC-
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM----------------AS- 246 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~----------------~d- 246 (404)
.++++||+++|+++|++++.|. .+|+||++.++ .+.|+++||+|++++ .+
T Consensus 27 ~~~~~~l~~~l~~~g~~~~~d~------------~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~ 93 (353)
T 1y0y_A 27 LGIRDVVIEEIKDYVDEVKVDK------------LGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGV 93 (353)
T ss_dssp GTHHHHHHHHHGGGSSEEEECT------------TCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSC
T ss_pred HHHHHHHHHHHHhhCCeEEEcC------------CCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceEEEEEeCCc
Confidence 4688999999999999998875 57999999776 678999999999951 00
Q ss_pred --------------------------------------------------------------CCCC--------------
Q psy15910 247 --------------------------------------------------------------PFIG-------------- 250 (404)
Q Consensus 247 --------------------------------------------------------------~f~G-------------- 250 (404)
-.+|
T Consensus 94 ~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~ 173 (353)
T 1y0y_A 94 DPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGK 173 (353)
T ss_dssp CGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETT
T ss_pred chhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecC
Confidence 0134
Q ss_pred ------CCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCcccc
Q psy15910 251 ------ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLT 324 (404)
Q Consensus 251 ------A~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~ 324 (404)
|.|+++|||++|++++.|++ ++.+|.|+|+++||. ++.||++++..+
T Consensus 174 ~~i~gra~D~k~g~a~~l~a~~~l~~------~~~~i~~~~~~~EE~--------g~~G~~~~~~~~------------- 226 (353)
T 1y0y_A 174 HRFVSIAFDDRIAVYTILEVAKQLKD------AKADVYFVATVQEEV--------GLRGARTSAFGI------------- 226 (353)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHCCS------CSSEEEEEEESCCTT--------TSHHHHHHHHHH-------------
T ss_pred CeEEeccCccHHHHHHHHHHHHHhhc------CCCeEEEEEECCccc--------chhHHHHHhhcc-------------
Confidence 69999999999999988753 568999999999997 788999986432
Q ss_pred ccCCccEEEEeccCCCC
Q psy15910 325 KLDRMDMLVLLDLLGTS 341 (404)
Q Consensus 325 ~l~~I~~~IlLDmIG~~ 341 (404)
+.+++|++|+.+..
T Consensus 227 ---~~~~~i~~d~~~~~ 240 (353)
T 1y0y_A 227 ---EPDYGFAIDVTIAA 240 (353)
T ss_dssp ---CCSEEEEEEEEECC
T ss_pred ---CCCEEEEEeccccc
Confidence 24678899987653
No 33
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.23 E-value=2.4e-11 Score=121.52 Aligned_cols=104 Identities=18% Similarity=0.297 Sum_probs=84.6
Q ss_pred HhHHHHHHHHHHHHHhCCCe-EEEEcccCccCCCCCceeeEEEEEeCCC---CCceEEEEEecCCcCCCC-----C----
Q psy15910 181 ENLLKIFQYIISELKSSGLD-VETDTFSDTVPNFGRLTFTNIIGHVNPT---APRALSLACHYDSKIMAS-----P---- 247 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~-Ve~d~F~~~tp~~G~~~~~NIIa~l~g~---a~~~IVLgAHYDSv~~~d-----~---- 247 (404)
+++.++++||.++|+++|++ ++.+. ..||||+++++ ..+.|+|.||+|++|..+ +
T Consensus 29 ~~e~~~~~~l~~~l~~~G~~~~~~~~------------~~nvia~~~g~~~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~ 96 (417)
T 1fno_A 29 EGQWKLLRLLKQQLEEMGLVNITLSE------------KGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVE 96 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECT------------TCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEET
T ss_pred ccHHHHHHHHHHHHHHcCCCeEEECC------------CceEEEEECCCCCCCCCceEEEEeccccCCCCCCCCCceEEe
Confidence 57789999999999999998 77654 47999999764 246899999999998642 1
Q ss_pred -CC---------------------------------CC----CCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCc
Q psy15910 248 -FI---------------------------------GA----TDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGE 289 (404)
Q Consensus 248 -f~---------------------------------GA----~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgE 289 (404)
|. |+ .|+.+|||++|++++.|++. ..++.+|.|+|..+|
T Consensus 97 ~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~---~~~~~~v~~~~~~~E 173 (417)
T 1fno_A 97 NYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGN---PIPHGDIKVAFTPDE 173 (417)
T ss_dssp TCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSS---SCCCCCEEEEEESCG
T ss_pred cCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhC---CCCCCcEEEEEEecc
Confidence 12 33 78889999999999999874 346789999999999
Q ss_pred ccccccCCCCCchhhHHHH
Q psy15910 290 EAFNEWSAEDSIWGARHLA 308 (404)
Q Consensus 290 E~F~~W~~~DgL~GSr~la 308 (404)
|. + .|+++++
T Consensus 174 E~--------g-~Ga~~~~ 183 (417)
T 1fno_A 174 EV--------G-KGAKHFD 183 (417)
T ss_dssp GG--------T-CTTTTCC
T ss_pred cc--------C-CChhhhc
Confidence 96 5 6887775
No 34
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.23 E-value=8.8e-11 Score=117.67 Aligned_cols=132 Identities=17% Similarity=0.203 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccC----ccCCCC------CceeeEEEEEeCCC-CCceEEEEEecCCcCCCC-----
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSD----TVPNFG------RLTFTNIIGHVNPT-APRALSLACHYDSKIMAS----- 246 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~----~tp~~G------~~~~~NIIa~l~g~-a~~~IVLgAHYDSv~~~d----- 246 (404)
+.++++||.++|+++|++++...+.. ..|..+ .....||||++.+. ..+.|+|.||||++|..+
T Consensus 45 e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~ 124 (433)
T 3pfo_A 45 EAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWS 124 (433)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCC
Confidence 36789999999999999998764321 011000 12258999999864 456899999999998642
Q ss_pred --C-----------CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHh
Q psy15910 247 --P-----------FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWER 313 (404)
Q Consensus 247 --~-----------f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~ 313 (404)
+ ..|+.|+.+|+|++|++++.|.+.. ..++.+|.|+|..+||. +..|++++...
T Consensus 125 ~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~--------g~~G~~~~~~~--- 191 (433)
T 3pfo_A 125 DPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAG--YAPDARVHVQTVTEEES--------TGNGALSTLMR--- 191 (433)
T ss_dssp SCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTT--EEESSCEEEEEESCTTT--------TCHHHHHHHHT---
T ss_pred CCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcC--CCCCccEEEEEEecCcc--------CChhHHHHHhc---
Confidence 1 2599999999999999999998752 24678999999999996 55799887642
Q ss_pred hhccccCccccccCCccEEEEeccCC
Q psy15910 314 SHLQHRGKTLTKLDRMDMLVLLDLLG 339 (404)
Q Consensus 314 ~~~p~~~~~~~~l~~I~~~IlLDmIG 339 (404)
. -+++++|..|-.+
T Consensus 192 ~------------~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 192 G------------YRADACLIPEPTG 205 (433)
T ss_dssp T------------CCCSEEEECCCCS
T ss_pred C------------CCCCEEEEeCCCC
Confidence 0 1467777777443
No 35
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.23 E-value=2.5e-11 Score=119.81 Aligned_cols=108 Identities=21% Similarity=0.162 Sum_probs=85.1
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeC---CCCCceEEEEEecCCcCCC---------CC-
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVN---PTAPRALSLACHYDSKIMA---------SP- 247 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~---g~a~~~IVLgAHYDSv~~~---------d~- 247 (404)
.++.++++||.++|+++|++++.+. .|+++.+. +...+.|+|.||||++|.. ++
T Consensus 26 ~~e~~~~~~l~~~l~~~G~~~~~~~-------------~~~~~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~ 92 (364)
T 2rb7_A 26 EQISRCAGFIMDWCAQNGIHAERMD-------------HDGIPSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDR 92 (364)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEE-------------ETTEEEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTE
T ss_pred chHHHHHHHHHHHHHHcCCeEEEec-------------CCCceEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCE
Confidence 4567899999999999999987753 56778775 3345689999999999751 22
Q ss_pred --CCCCCCCchHHHHHHHHHHHHHHHhhcCCC---CcC--EEEEEecCcccccccCCCCCchhhHHHHHH
Q psy15910 248 --FIGATDSAVPCAMLLYIARLMRQELSQLNQ---NLG--LDLIFFDGEEAFNEWSAEDSIWGARHLAAK 310 (404)
Q Consensus 248 --f~GA~D~AsGvA~LLElAr~L~~~l~~~~~---~~t--I~fVfFdgEE~F~~W~~~DgL~GSr~la~~ 310 (404)
..|+.|+++|+|++|++++.|.+.. .+. +.+ |.|+|+.+||.- ++.|++++++.
T Consensus 93 ~~grG~~D~k~~~a~~l~a~~~l~~~~--~~~~~~~g~~~v~~~~~~~EE~~-------g~~G~~~~~~~ 153 (364)
T 2rb7_A 93 LYGRGANDDKYAVALGLVMFRDRLNAL--KAAGRSQKDMALGLLITGDEEIG-------GMNGAAKALPL 153 (364)
T ss_dssp EESTTTTTTHHHHHHHHHHHHHHHHHH--HHTTCCGGGCCEEEEEESCGGGT-------STTTHHHHGGG
T ss_pred EEecccccccHHHHHHHHHHHHHHHhC--CCCcccCCCccEEEEEEeccccC-------chhhHHHHHhc
Confidence 4789999999999999999998752 223 346 999999999941 57899988654
No 36
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.22 E-value=2.6e-10 Score=115.65 Aligned_cols=108 Identities=16% Similarity=0.123 Sum_probs=87.9
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCC--------------C
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA--------------S 246 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~--------------d 246 (404)
++..++++||.++|+++|++++... ..++++++ +...+.|+|.+|||++|.. +
T Consensus 43 ~~~~~~~~~l~~~l~~~G~~~~~~~------------~~~~~~~~-g~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~ 109 (470)
T 1lfw_A 43 KGPVDAMTKFLSFAKRDGFDTENFA------------NYAGRVNF-GAGDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEE 109 (470)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEET------------TTEEEEEE-CCCSSEEEEEEECCBCCCCSCCSSCTTSCEECTT
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEec------------CeEEEEEe-CCCCCeEEEEEeecccCCCCCccCCCcceeEeeC
Confidence 4678899999999999999987532 14577777 4445789999999999853 2
Q ss_pred C---CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHH
Q psy15910 247 P---FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKW 311 (404)
Q Consensus 247 ~---f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~ 311 (404)
+ ..|+.|++.|+|++|++++.|++.. ..++.+|.|+|+.+||. ++.|++++++..
T Consensus 110 g~l~grG~~D~K~~~a~~l~a~~~l~~~~--~~~~~~i~~i~~~~EE~--------g~~G~~~~~~~~ 167 (470)
T 1lfw_A 110 GRIYGRGSADDKGPSLTAYYGMLLLKEAG--FKPKKKIDFVLGTNEET--------NWVGIDYYLKHE 167 (470)
T ss_dssp CEEESTTSSSSHHHHHHHHHHHHHHHHHT--CCCSSEEEEEEESCTTT--------TCHHHHHHHHHS
T ss_pred CEEECCCcccChHHHHHHHHHHHHHHHcC--CCCCCCEEEEEecCccc--------CCccHHHHHHhC
Confidence 2 4788999999999999999998852 45678999999999997 677999988753
No 37
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.21 E-value=2.9e-11 Score=119.15 Aligned_cols=118 Identities=17% Similarity=0.214 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC-CCceEEEEEecCCcCC----------------C-
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT-APRALSLACHYDSKIM----------------A- 245 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~-a~~~IVLgAHYDSv~~----------------~- 245 (404)
.++++||.++|+++|++++.|. .+||||++++. ..+.|+|.||+|++++ .
T Consensus 26 ~~~~~~l~~~l~~~g~~~~~d~------------~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg 93 (349)
T 2gre_A 26 AKIINFIENYVSEWNVETKRNN------------KGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGG 93 (349)
T ss_dssp HHHHHHHHHHTTTSSSEEEECS------------SSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESS
T ss_pred HHHHHHHHHHHHHhCCEEEEec------------CCcEEEEecCCCCCceEEEEecccccceeEEEECCCCeEEEEecCC
Confidence 5688999999999999988864 47999999765 3468999999999931 0
Q ss_pred ----------------CC-------------------------------------------------CC-----------
Q psy15910 246 ----------------SP-------------------------------------------------FI----------- 249 (404)
Q Consensus 246 ----------------d~-------------------------------------------------f~----------- 249 (404)
++ .+
T Consensus 94 ~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~ 173 (349)
T 2gre_A 94 FRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQ 173 (349)
T ss_dssp CCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCE
T ss_pred CccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccE
Confidence 00 00
Q ss_pred ----C-----CCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccC
Q psy15910 250 ----G-----ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRG 320 (404)
Q Consensus 250 ----G-----A~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~ 320 (404)
| +.|+.+|||++|++++.|++.. .+++.+|.|+|++.||. ++.||+++ .
T Consensus 174 ~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~~~i~~~~~~~EE~--------G~~g~~~~-----~------- 231 (349)
T 2gre_A 174 ITESGYIKSRHLDDKVSVAILLKLIKRLQDEN--VTLPYTTHFLISNNEEI--------GYGGNSNI-----P------- 231 (349)
T ss_dssp ECTTSEEEESCCTTHHHHHHHHHHHHHHHHHT--CCCSEEEEEEEESCC------------CCCCCC-----C-------
T ss_pred EccCCeEEEeeccchHHHHHHHHHHHHHHhcc--CCCCceEEEEEECcccC--------Cchhhccc-----c-------
Confidence 1 6999999999999999998752 34678999999999997 66788764 1
Q ss_pred ccccccCCccEEEEeccCCCC
Q psy15910 321 KTLTKLDRMDMLVLLDLLGTS 341 (404)
Q Consensus 321 ~~~~~l~~I~~~IlLDmIG~~ 341 (404)
.+.+++|++|+.+..
T Consensus 232 ------~~~~~~i~~D~~~~~ 246 (349)
T 2gre_A 232 ------EETVEYLAVDMGALG 246 (349)
T ss_dssp ------TTEEEEEEECCCCCS
T ss_pred ------cCCCEEEEEeccccc
Confidence 147889999998765
No 38
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.19 E-value=1.5e-11 Score=119.91 Aligned_cols=116 Identities=18% Similarity=0.167 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCC----------------CC-
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM----------------AS- 246 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~----------------~d- 246 (404)
.++++||+++|+++|+ ++.|. .+||||++.+ ..+.|+++||+|++++ .+
T Consensus 22 ~~~~~~l~~~l~~~g~-~~~d~------------~gnlia~~~~-~~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~ 87 (332)
T 2wyr_A 22 ERIREEIIREIKDFAD-YKVDA------------IGNLIVELGE-GEERILFMAHMDEIGLLITGITDEGKLRFRKVGGI 87 (332)
T ss_dssp HHHHHHHHHHHTTTCC-CEECT------------TCCEEEEEES-SSEEEEEEEECCBCEEEEEEECTTSCEEEEEESCC
T ss_pred HHHHHHHHHHHhhcCc-EEEcC------------CCeEEEEecC-CCceEEEEeccCcccEEEEEECCCCeEEEEecCCc
Confidence 5788999999999999 77654 5799999877 4578999999999951 00
Q ss_pred --------------------------C---------------------------------CCC-----------------
Q psy15910 247 --------------------------P---------------------------------FIG----------------- 250 (404)
Q Consensus 247 --------------------------~---------------------------------f~G----------------- 250 (404)
+ .+|
T Consensus 88 ~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~~~~~~~i 167 (332)
T 2wyr_A 88 DDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYV 167 (332)
T ss_dssp CGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCEEETTTEE
T ss_pred ChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccEEecCCeE
Confidence 0 001
Q ss_pred ---CCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccC
Q psy15910 251 ---ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLD 327 (404)
Q Consensus 251 ---A~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~ 327 (404)
|.|+++|||++|++++.|++. .++.+|.|+|+++||. ++.||++++.. -
T Consensus 168 ~gra~D~k~g~a~~l~a~~~l~~~----~~~~~i~~~~~~~EE~--------G~~G~~~~~~~----------------~ 219 (332)
T 2wyr_A 168 STRGLDDRFGVVALIEAIKDLVDH----ELEGKVIFAFTVQEEV--------GLKGAKFLANH----------------Y 219 (332)
T ss_dssp ECTTHHHHHHHHHHHHHHHTTTTS----CCSSEEEEEEESCGGG--------TSHHHHHHTTT----------------C
T ss_pred EcccCCcHHHHHHHHHHHHHHhhc----CCCceEEEEEECcccc--------CcchHHHHhcc----------------c
Confidence 699999999999999998763 3668999999999997 77899887531 1
Q ss_pred CccEEEEeccCCCC
Q psy15910 328 RMDMLVLLDLLGTS 341 (404)
Q Consensus 328 ~I~~~IlLDmIG~~ 341 (404)
+.+++|++|+.+..
T Consensus 220 ~~~~~i~~d~~~~~ 233 (332)
T 2wyr_A 220 YPQYAFAIDSFACC 233 (332)
T ss_dssp CCSEEEEECCEECC
T ss_pred CCCEEEEEeccccc
Confidence 35788999987653
No 39
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.15 E-value=4.3e-10 Score=114.94 Aligned_cols=126 Identities=16% Similarity=0.118 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHhCCCe---EEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCC-------CC----
Q psy15910 182 NLLKIFQYIISELKSSGLD---VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA-------SP---- 247 (404)
Q Consensus 182 ~~~~a~~yI~~~L~~lG~~---Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~-------d~---- 247 (404)
++.++++||.++|+++|++ ++..... + ...||||++.+...+.|+|.+|||++|.. ++
T Consensus 46 ~e~~~~~~i~~~l~~~G~~~~~~~~~~~~------~--~~~~v~a~~~g~~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~ 117 (472)
T 3pfe_A 46 YMEQAVNHIANWCKSHAPKGMTLEIVRLK------N--RTPLLFMEIPGQIDDTVLLYGHLDKQPEMSGWSDDLHPWKPV 117 (472)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEECCT------T--SCCEEEEEECCSEEEEEEEEEECCBCCCCSCCCTTCBTTBCE
T ss_pred hHHHHHHHHHHHHHHcCCCCcceEEEecC------C--CCcEEEEEEcCCCCCeEEEEccccCCCCcCCCCcCCCCCceE
Confidence 4688999999999999984 5554321 1 13699999987555789999999999852 11
Q ss_pred -------CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccC
Q psy15910 248 -------FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRG 320 (404)
Q Consensus 248 -------f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~ 320 (404)
..|+.|+..|+|++|.+++.|++.. ..+. +|.|+|..+||. +..|++++++....
T Consensus 118 ~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~--~~~~-~v~~~~~~~EE~--------g~~g~~~~~~~~~~------- 179 (472)
T 3pfe_A 118 LKNGLLYGRGGADDGYSAYASLTAIRALEQQG--LPYP-RCILIIEACEES--------GSYDLPFYIELLKE------- 179 (472)
T ss_dssp EETTEEESTTCCCCCHHHHHHHHHHHHHHHTT--CCCE-EEEEEEESCGGG--------TSTTHHHHHHHHHH-------
T ss_pred EECCEEEEeCcccCcHHHHHHHHHHHHHHHcC--CCCC-cEEEEEEeCCCC--------CChhHHHHHHHhHh-------
Confidence 3799999999999999999998752 2344 899999999997 55799999876421
Q ss_pred ccccccCCccEEEEecc
Q psy15910 321 KTLTKLDRMDMLVLLDL 337 (404)
Q Consensus 321 ~~~~~l~~I~~~IlLDm 337 (404)
.+.++++++.+|.
T Consensus 180 ----~~~~~d~~~~~~~ 192 (472)
T 3pfe_A 180 ----RIGKPSLVICLDS 192 (472)
T ss_dssp ----HHCCCSEEEEECC
T ss_pred ----hccCCCEEEEeCC
Confidence 2345777888873
No 40
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.15 E-value=2.2e-10 Score=112.42 Aligned_cols=106 Identities=24% Similarity=0.225 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHhCCCe-EEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC--------C---CCC
Q psy15910 183 LLKIFQYIISELKSSGLD-VETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS--------P---FIG 250 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~-Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d--------~---f~G 250 (404)
+.++++||.++|+++|++ ++++. . ..||+|++.++..+.|+|.||||++|..+ + ..|
T Consensus 32 e~~~~~~l~~~l~~~G~~~~~~~~-------~----~~~~~a~~~~~~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G 100 (369)
T 3tx8_A 32 EKQIADEIEDALRNLNLPGVEVFR-------F----NNNVLARTNRGLASRVMLAGHIDTVPIADNLPSRVEDGIMYGCG 100 (369)
T ss_dssp THHHHHHHHHHHHTTTCTTCEEEE-------E----TTEEEEECCCCCSCEEEEEEECCBSCCCSCCSCEECSSEEESSS
T ss_pred HHHHHHHHHHHHHhcCCCCcEEec-------c----CCcEEEEecCCCCCeEEEEcccCccCCCCCCCCeEECCEEEcCC
Confidence 367889999999999873 44443 1 26899999876667999999999998732 1 479
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCc--hhhHHHHHH
Q psy15910 251 ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSI--WGARHLAAK 310 (404)
Q Consensus 251 A~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL--~GSr~la~~ 310 (404)
+.|+.+|+|++|++++.|++. ..++.+|.|+|..+||. +. .|++++++.
T Consensus 101 ~~D~K~~~a~~l~a~~~l~~~---~~~~~~v~~~~~~~EE~--------g~~~~G~~~~~~~ 151 (369)
T 3tx8_A 101 TVDMKSGLAVYLHTFATLATS---TELKHDLTLIAYECEEV--------ADHLNGLGHIRDE 151 (369)
T ss_dssp TTTTHHHHHHHHHHHHHHTSC---TTCCSEEEEEEECCCSS--------CTTSCHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHhh---cCCCccEEEEEEecccc--------CcccccHHHHHHh
Confidence 999999999999999999752 35688999999999996 33 599988765
No 41
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.14 E-value=1.9e-10 Score=115.07 Aligned_cols=107 Identities=18% Similarity=0.191 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC-CCceEEEEEecCCcCCCC----CCCCCCCC---
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT-APRALSLACHYDSKIMAS----PFIGATDS--- 254 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~-a~~~IVLgAHYDSv~~~d----~f~GA~D~--- 254 (404)
+.++++||.++|+++|++++.+.. | ..||+|+++++ ..+.|+|.||||++|..+ +|.+..|+
T Consensus 51 e~~~~~~l~~~l~~~G~~v~~~~~-------~---~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~ 120 (404)
T 1ysj_A 51 EVETTKKIRRWLEEEQIEILDVPQ-------L---KTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPFASKVDGTMH 120 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEECCCTT-------C---SSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBC
T ss_pred hHHHHHHHHHHHHHcCCceEEecc-------C---CceEEEEEeCCCCCCEEEEEEecccccCCCCCCCCcccCCCCceE
Confidence 367899999999999998876541 2 36999999765 457899999999998642 23332222
Q ss_pred ----chHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHH
Q psy15910 255 ----AVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 310 (404)
Q Consensus 255 ----AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~ 310 (404)
..|+|++|++++.|++.. ..++.+|.|+|..+||. ..||+++++.
T Consensus 121 g~G~kg~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EE~---------~~G~~~~~~~ 169 (404)
T 1ysj_A 121 ACGHDFHTASIIGTAMLLNQRR--AELKGTVRFIFQPAEEI---------AAGARKVLEA 169 (404)
T ss_dssp TTSHHHHHHHHHHHHHHHHTCG--GGCSSEEEEEEESCTTT---------TCHHHHHHHT
T ss_pred cCcChHHHHHHHHHHHHHHhcc--ccCCceEEEEEeccccc---------chhHHHHHhc
Confidence 379999999999998742 35778999999999995 3599998763
No 42
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.14 E-value=4.3e-11 Score=117.42 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC-CCceEEEEEecCCcCC----------------CC
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT-APRALSLACHYDSKIM----------------AS 246 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~-a~~~IVLgAHYDSv~~----------------~d 246 (404)
.++++||+++|+++|++++.|. .+||||.+.+. ..+.|+|.||+|++++ .+
T Consensus 18 ~~~~~~l~~~l~~~g~~~~~d~------------~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg 85 (340)
T 2fvg_A 18 GKVRDFIKSKIEGLVDNLYTDV------------LGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGG 85 (340)
T ss_dssp HHHHHHHHHHHGGGSSEEEECT------------TSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESC
T ss_pred HHHHHHHHHHHHhhCCEEEEeC------------CCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEEeeCC
Confidence 5689999999999999998865 46999998765 3468999999999982 00
Q ss_pred ----CCC----------------------------------------------------C-------------------C
Q psy15910 247 ----PFI----------------------------------------------------G-------------------A 251 (404)
Q Consensus 247 ----~f~----------------------------------------------------G-------------------A 251 (404)
++. | |
T Consensus 86 ~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra 165 (340)
T 2fvg_A 86 VDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKA 165 (340)
T ss_dssp CCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESC
T ss_pred cccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeecc
Confidence 010 2 6
Q ss_pred CCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccE
Q psy15910 252 TDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDM 331 (404)
Q Consensus 252 ~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~ 331 (404)
.|+++|||++|++++.|+ +++.+|.|+|+++||. ++.|+++++..+ ..++
T Consensus 166 ~D~k~g~a~~l~a~~~l~------~~~~~i~~~~~~~EE~--------G~~G~~~~~~~~----------------~~~~ 215 (340)
T 2fvg_A 166 FDDRAGCSVLIDVLESGV------SPAYDTYFVFTVQEET--------GLRGSAVVVEQL----------------KPTC 215 (340)
T ss_dssp HHHHHHHHHHHHHHHTCC------CCSEEEEEEEECCCC-------------CHHHHHHH----------------CCSE
T ss_pred CccHHHHHHHHHHHHHhh------ccCCcEEEEEEccccc--------chhhhHHHhhcc----------------CCCE
Confidence 899999999999998875 3568999999999997 778999987632 2367
Q ss_pred EEEeccCCC
Q psy15910 332 LVLLDLLGT 340 (404)
Q Consensus 332 ~IlLDmIG~ 340 (404)
+|++|+.+.
T Consensus 216 ~i~~d~~~~ 224 (340)
T 2fvg_A 216 AIVVETTTA 224 (340)
T ss_dssp EEEEEEEEE
T ss_pred EEEEecccC
Confidence 788887643
No 43
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.11 E-value=5.3e-10 Score=112.32 Aligned_cols=106 Identities=23% Similarity=0.301 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC----CCC----CCCCC
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS----PFI----GATDS 254 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d----~f~----GA~D~ 254 (404)
+.++++||.++|+++|++++.+. + ..||+|+++++.++.|+|.||||++|..+ +|. |.-.+
T Consensus 47 e~~~~~~l~~~l~~~G~~v~~~~--------~---~~~l~a~~~~~~~~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g 115 (418)
T 1xmb_A 47 ELETSKLIRSELELIGIKYRYPV--------A---ITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHA 115 (418)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEE--------T---TTEEEEEEESSSSCEEEEEEECCCBSCCCCCCSTTCCSSTTCBCC
T ss_pred hHHHHHHHHHHHHHcCCeeEecc--------C---CcEEEEEEcCCCCCEEEEEecccccCCCCCCCCCcccCCCCceEe
Confidence 46889999999999999988764 1 37999999765337899999999998642 122 11111
Q ss_pred ---chHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHH
Q psy15910 255 ---AVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 310 (404)
Q Consensus 255 ---AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~ 310 (404)
..|+|++|++++.|++.. ..++.+|.|+|..+||+ ..|++++++.
T Consensus 116 ~G~d~~~a~~l~a~~~l~~~~--~~~~~~v~~~~~~~EEg---------~~G~~~~~~~ 163 (418)
T 1xmb_A 116 CGHDGHVTMLLGAAKILHEHR--HHLQGTVVLIFQPAEEG---------LSGAKKMREE 163 (418)
T ss_dssp SSHHHHHHHHHHHHHHHHHTG--GGCSSEEEEEEECCTTT---------TCHHHHHHHT
T ss_pred CCchHHHHHHHHHHHHHHhcc--ccCCceEEEEEeccccc---------cccHHHHHHc
Confidence 279999999999998852 34778999999999993 3699998763
No 44
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.05 E-value=7.1e-10 Score=114.28 Aligned_cols=107 Identities=16% Similarity=0.236 Sum_probs=85.9
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeC-CCCCceEEEEEecCCcCCCC-----C-------
Q psy15910 181 ENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVN-PTAPRALSLACHYDSKIMAS-----P------- 247 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~-g~a~~~IVLgAHYDSv~~~d-----~------- 247 (404)
++..++++||.++|+++|++++.. .|+++.+. +...+.|+|.+|||+||..+ +
T Consensus 63 ~~~~~~~~~l~~~l~~~G~~~~~~--------------~~~~~~~~~g~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~ 128 (492)
T 3khx_A 63 PGPRKALDYMYEIAHRDGFTTHDV--------------DHIAGRIEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPVVTE 128 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEE--------------TTTEEEEEEECSSCEEEEEEECCCCCCCSCCSSCTTSCEECS
T ss_pred hHHHHHHHHHHHHHHHcCCcceEe--------------CCEEEEEEeCCCCCEEEEEEeccCCCCCCCcccCCCceEEEC
Confidence 456799999999999999998753 23454443 34457899999999998642 2
Q ss_pred ----CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHH
Q psy15910 248 ----FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKW 311 (404)
Q Consensus 248 ----f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~ 311 (404)
..|+.|+.+|+|++|.+++.|++.. .+++.+|.|+|..+||. +..|++++.+..
T Consensus 129 g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~~~i~~~~~~~EE~--------g~~g~~~~~~~~ 186 (492)
T 3khx_A 129 DAIIARGTLDDKGPTIAAYYAIKILEDMN--VDWKKRIHMIIGTDEES--------DWKCTDRYFKTE 186 (492)
T ss_dssp SEEESTTTTTTHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEECCTTC--------CCCTTSHHHHHS
T ss_pred CEEEecCCccCcHHHHHHHHHHHHHHHcC--CCCCCCEEEEEECCccC--------CCcCHHHHHHhC
Confidence 2699999999999999999998752 35678999999999997 567999998764
No 45
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=98.99 E-value=7.4e-10 Score=114.22 Aligned_cols=100 Identities=25% Similarity=0.288 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC----CCceEEEEEecCCcCCCC----------C--
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT----APRALSLACHYDSKIMAS----------P-- 247 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~----a~~~IVLgAHYDSv~~~d----------~-- 247 (404)
.++++||.++|+++|++++.+. ..|||++++++ ..+.|+|.||||++|..+ +
T Consensus 34 ~~~~~~l~~~l~~~G~~v~~~~------------~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~ 101 (490)
T 3mru_A 34 EALAQYIVTWATEQGFDVRRDP------------TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQ 101 (490)
T ss_dssp TTHHHHHHHHHHHTTCEEEECT------------TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCC
T ss_pred HHHHHHHHHHHHHcCCEEEEcC------------CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCce
Confidence 6788999999999999988764 36999999753 457899999999998641 1
Q ss_pred ---------CCCCC---CCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHH
Q psy15910 248 ---------FIGAT---DSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 309 (404)
Q Consensus 248 ---------f~GA~---D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~ 309 (404)
..|++ |+++|+|++|++++ +. ..++.+|.|+|..+||. ++.|++++..
T Consensus 102 ~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~---~~---~~~~~~v~~~~~~~EE~--------g~~Ga~~~~~ 161 (490)
T 3mru_A 102 PYIDGEWVTAKGTTLGADNGIGMASCLAVLA---SK---EIKHGPIEVLLTIDEEA--------GMTGAFGLEA 161 (490)
T ss_dssp EEEETTEEEETTBCCCHHHHTTHHHHHHHHH---CS---SCCCCSEEEEEESCSSS--------TTGGGGTCCS
T ss_pred EEeeCCeEecCCCccCCCCHHHHHHHHHHHH---hC---CCCCCCEEEEEEccccc--------ccHhHHHhhh
Confidence 25886 99999999998752 21 34578999999999997 6789988753
No 46
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=98.99 E-value=4.8e-10 Score=114.77 Aligned_cols=101 Identities=25% Similarity=0.260 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC----CCceEEEEEecCCcCCCC----------C-
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT----APRALSLACHYDSKIMAS----------P- 247 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~----a~~~IVLgAHYDSv~~~d----------~- 247 (404)
+.++++||.++|+++|++++.+. .+||+|+++++ ..+.|+|.||||++|..+ +
T Consensus 30 e~~~~~~l~~~l~~~G~~~~~~~------------~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~ 97 (487)
T 2qyv_A 30 EEQLAQFIINWAKTKGFFAERDE------------VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPI 97 (487)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECT------------TCCEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCC
T ss_pred HHHHHHHHHHHHHHcCCEEEEcC------------CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCe
Confidence 36789999999999999988764 36999999752 346899999999998742 1
Q ss_pred ----------CCCCC---CCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHH
Q psy15910 248 ----------FIGAT---DSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 309 (404)
Q Consensus 248 ----------f~GA~---D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~ 309 (404)
..|++ |+..|||++|++++. . ..++.+|.|+|+.+||. ++.||+++++
T Consensus 98 ~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~---~~~~~~v~~~~~~~EE~--------g~~Ga~~~~~ 158 (487)
T 2qyv_A 98 LPYIDGDWVKAKGTTLGADNGIGMASALAVLES---N---DIAHPELEVLLTMTEER--------GMEGAIGLRP 158 (487)
T ss_dssp CEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---S---SSCCSSEEEEEESCTTT--------TCHHHHTCCS
T ss_pred eEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---C---CCCCCCEEEEEEecccc--------CCHHHHHHHH
Confidence 24776 999999999999863 1 23668999999999996 6789988764
No 47
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.99 E-value=1.4e-09 Score=108.77 Aligned_cols=120 Identities=16% Similarity=0.163 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC-CCceEEEEEecCCcCCCCCCCCCCCCchHHHHH
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT-APRALSLACHYDSKIMASPFIGATDSAVPCAML 261 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~-a~~~IVLgAHYDSv~~~d~f~GA~D~AsGvA~L 261 (404)
+.++++||.++|+++|++++.+. .| ...||||++.+. ..+.|+|.||+|++|......|. | .-.|++
T Consensus 35 E~~~~~~i~~~l~~~G~~v~~~~-------~g--~~~~via~~~g~~~g~~i~l~ah~D~vpg~~ha~G~-d--~~~a~~ 102 (394)
T 3ram_A 35 EIFASRTLIDRLKEHDFEIETEI-------AG--HATGFIATYDSGLDGPAIGFLAEYDALPGLGHACGH-N--IIGTAS 102 (394)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE-------TT--EEEEEEEEEECSSSSCEEEEEECCCCCTTTSSTTCH-H--HHHHHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeCC-------CC--CceEEEEEEeCCCCCCEEEEEEecccCCCcceECCc-c--HHHHHH
Confidence 46889999999999999998875 12 136999999865 35789999999999831112232 2 345778
Q ss_pred HHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCC-chhhH-HHHHHHHhhhccccCccccccCCccEEEEecc
Q psy15910 262 LYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDS-IWGAR-HLAAKWERSHLQHRGKTLTKLDRMDMLVLLDL 337 (404)
Q Consensus 262 LElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~Dg-L~GSr-~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDm 337 (404)
|.+|+.|++.. ..++.+|.|+|+.+||. + +.||+ ++++. ..+++++++|.++.
T Consensus 103 l~aa~~L~~~~--~~~~g~v~~~f~~~EE~--------~~~~Ga~~~~~~~-------------g~~~~~d~~~~~h~ 157 (394)
T 3ram_A 103 VLGAIGLKQVI--DQIGGKVVVLGCPAEEG--------GENGSAKASYVKA-------------GVIDQIDIALMIHP 157 (394)
T ss_dssp HHHHHHHHTTH--HHHCSEEEEEECCCTTC--------CTTCCHHHHHHHH-------------TGGGGCSEEECCEE
T ss_pred HHHHHHHHHhH--hhCCceEEEEEECCccC--------CCCCchHHHHHHc-------------CCcccCCEEEEECC
Confidence 88898887642 24678999999999996 4 57999 77653 12345667766654
No 48
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=98.98 E-value=2.4e-09 Score=104.54 Aligned_cols=102 Identities=17% Similarity=0.235 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCC----------------CC-
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM----------------AS- 246 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~----------------~d- 246 (404)
.++++||+++|+++|++++.|. .+|+|+++.+...+.|+++||+||+++ ..
T Consensus 23 ~~~~~~l~~~l~~~g~~v~~d~------------~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~ 90 (348)
T 1ylo_A 23 QEVRQILLEEAARLQKEVRFDG------------LGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNV 90 (348)
T ss_dssp HHHHHHHHHHHHHTTCCEEECT------------TCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCC
T ss_pred HHHHHHHHHHHHhhCCEEEEec------------CCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEEecCCc
Confidence 5689999999999999998765 479999987765568999999999951 00
Q ss_pred ----------------------------------------------------CCCC--------------------CCCC
Q psy15910 247 ----------------------------------------------------PFIG--------------------ATDS 254 (404)
Q Consensus 247 ----------------------------------------------------~f~G--------------------A~D~ 254 (404)
--.| +.|+
T Consensus 91 ~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~ 170 (348)
T 1ylo_A 91 RMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDD 170 (348)
T ss_dssp CGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHH
T ss_pred chhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCccc
Confidence 0001 4788
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHH
Q psy15910 255 AVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAA 309 (404)
Q Consensus 255 AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~ 309 (404)
..|||++|++++.+.+ ..++.++.++|+.+||. ++.|++..+.
T Consensus 171 k~g~aa~l~al~~l~~----~~~~~~~~~~~t~~EEv--------G~~Ga~~~~~ 213 (348)
T 1ylo_A 171 RLSCYLLVTLLRELHD----AELPAEVWLVASSSEEV--------GLRGGQTATR 213 (348)
T ss_dssp HHHHHHHHHHHHHHTT----CCCSSEEEEEEESCCTT--------SSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhh----cCCCceEEEEEEccccc--------chhHHHHhhc
Confidence 8999999999999865 23567899999999997 7788887654
No 49
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=98.95 E-value=1.3e-09 Score=107.42 Aligned_cols=100 Identities=23% Similarity=0.239 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCCC-------------C-
Q psy15910 182 NLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMAS-------------P- 247 (404)
Q Consensus 182 ~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~d-------------~- 247 (404)
++.++++||.++|+ |++++.+.+.. + ..||+| ++++ +.|+|.+|+|++|..+ +
T Consensus 32 ~e~~~~~~l~~~l~--G~~~~~~~~~~-----~---~~~~~a-~~g~--~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~ 98 (369)
T 2f7v_A 32 AEGGIFDYLRAQLP--GFQVEVIDHGD-----G---AVSLYA-VRGT--PKYLFNVHLDTVPDSPHWSADPHVMRRTEDR 98 (369)
T ss_dssp SSSHHHHHHHTTCT--TCEEEEEECST-----T---CEEEEE-EESC--CSEEEEEECCBCCCCSSCSSCTTSCEECSSE
T ss_pred cHHHHHHHHHHHhC--CCceEEEEcCC-----C---ceEEEE-EcCC--CeEEEEeeecccCCCCCCCCCCCCcEEECCE
Confidence 45788999999999 99998876321 1 479999 8766 6799999999998632 1
Q ss_pred --CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHH
Q psy15910 248 --FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAK 310 (404)
Q Consensus 248 --f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~ 310 (404)
..|+.|++.|+|++|++++. ++.+|.|+|..+||.. ++.|++++++.
T Consensus 99 l~grG~~D~k~g~a~~l~a~~~---------~~~~v~~~~~~~EE~~-------g~~G~~~~~~~ 147 (369)
T 2f7v_A 99 VIGLGVCDIKGAAAALVAAANA---------GDGDAAFLFSSDEEAN-------DPRCIAAFLAR 147 (369)
T ss_dssp EECTTTTTTHHHHHHHHHHHTT---------CCCCEEEEEESCTTSS-------SCCHHHHHHTT
T ss_pred EEecccccccHHHHHHHHHHhc---------CCCCEEEEEEeCcccC-------CCcCHHHHHhc
Confidence 47899999999999999865 4579999999999951 56799988753
No 50
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.86 E-value=1.5e-08 Score=102.91 Aligned_cols=130 Identities=20% Similarity=0.273 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEc-ccC-----------------------ccC--CCCCc--eeeEEEEEeCCCC-CceE
Q psy15910 183 LLKIFQYIISELKSSGLDVETDT-FSD-----------------------TVP--NFGRL--TFTNIIGHVNPTA-PRAL 233 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~-F~~-----------------------~tp--~~G~~--~~~NIIa~l~g~a-~~~I 233 (404)
+.++++||.++|+++|++|+... +.. ..+ ..... ...||||++.+.. .+.|
T Consensus 33 E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i 112 (445)
T 3io1_A 33 EFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRPGPTL 112 (445)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGGGTTTCCCEEEEEECSSCCCEE
T ss_pred HHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccccccccccccccCCCCEEEEEEeCCCCCCEE
Confidence 46788999999999999987742 000 000 00000 2489999998653 5789
Q ss_pred EEEEecCCcCCCC-------CCC--------C---CCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccccccc
Q psy15910 234 SLACHYDSKIMAS-------PFI--------G---ATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEW 295 (404)
Q Consensus 234 VLgAHYDSv~~~d-------~f~--------G---A~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W 295 (404)
+|.||+|++|..+ +|. | ++.--.++|++|.+|+.|++.. ..++.+|.|+|..+||.
T Consensus 113 ~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa~~L~~~~--~~~~g~v~l~f~p~EE~---- 186 (445)
T 3io1_A 113 AFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYA--AQLNGVIKLIFQPAEEG---- 186 (445)
T ss_dssp EEEEECCCCCC-------------------------CTTCTHHHHHHHHHHHHHHTG--GGCCSEEEEEEESCTTT----
T ss_pred EEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHHHHHHhCc--CcCCceEEEEEeccccc----
Confidence 9999999999532 111 2 1111257999999999998752 35788999999999995
Q ss_pred CCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEec
Q psy15910 296 SAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLD 336 (404)
Q Consensus 296 ~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLD 336 (404)
..|++++++. ..++++++++.++
T Consensus 187 -----~~Ga~~~i~~-------------g~~~~~d~~~~~h 209 (445)
T 3io1_A 187 -----TRGARAMVAA-------------GVVDDVDYFTAIH 209 (445)
T ss_dssp -----TCHHHHHHHT-------------TTTTTCSEEEEEE
T ss_pred -----cchHHHHHHc-------------CCccccceeEEEe
Confidence 3599988753 2244567766665
No 51
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.83 E-value=2.6e-09 Score=104.54 Aligned_cols=119 Identities=19% Similarity=0.270 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCC---------------C--
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM---------------A-- 245 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~---------------~-- 245 (404)
+.++++||+++|+++|++++.|. .+|||+++.++..+.|+|+||+|++++ .
T Consensus 24 e~~~~~~l~~~l~~~g~~~~~d~------------~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~ 91 (346)
T 1vho_A 24 ETNVVSYIKSVIEPFVDEAKTTR------------HGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGV 91 (346)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECT------------TSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEEEEEEC---
T ss_pred hHHHHHHHHHHHHhhCCEEEEec------------CCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeEEEEEeCCc
Confidence 35689999999999999998875 579999997754578999999999952 0
Q ss_pred ---------------CC-C--------------------------------------CC-------------------CC
Q psy15910 246 ---------------SP-F--------------------------------------IG-------------------AT 252 (404)
Q Consensus 246 ---------------d~-f--------------------------------------~G-------------------A~ 252 (404)
++ + +| +.
T Consensus 92 ~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~ 171 (346)
T 1vho_A 92 DPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKAL 171 (346)
T ss_dssp -----CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTH
T ss_pred cCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccC
Confidence 00 0 01 46
Q ss_pred CCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEE
Q psy15910 253 DSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDML 332 (404)
Q Consensus 253 D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~ 332 (404)
|+.+||++++++++.+.+ ..++.++.++|+..||. ++.|++..+. .. ..+..
T Consensus 172 D~r~g~aa~l~al~~l~~----~~~~~~~~~~~t~~EEv--------G~~Ga~~~~~-----~i-----------~~~~~ 223 (346)
T 1vho_A 172 DNRASCGVLVKVLEFLKR----YDHPWDVYVVFSVQEET--------GCLGALTGAY-----EI-----------NPDAA 223 (346)
T ss_dssp HHHHHHHHHHHHHHHHTT----CCCSSEEEEEEECTTSS--------SHHHHHHTTC-----CC-----------CCSEE
T ss_pred ccHHHHHHHHHHHHHhhh----cCCCceEEEEEECCccc--------chhhHHHHhc-----cc-----------CCCEE
Confidence 888999999999999865 23557899999999997 6777765321 11 23566
Q ss_pred EEeccCCCC
Q psy15910 333 VLLDLLGTS 341 (404)
Q Consensus 333 IlLDmIG~~ 341 (404)
|.+|+....
T Consensus 224 i~~D~~~~~ 232 (346)
T 1vho_A 224 IVMDVTFAS 232 (346)
T ss_dssp EEEEEECCC
T ss_pred EEeeccccc
Confidence 777776553
No 52
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=98.72 E-value=2.8e-08 Score=99.33 Aligned_cols=120 Identities=18% Similarity=0.150 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCC--CCceEEEEEecCCcCC------CCCC------
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPT--APRALSLACHYDSKIM------ASPF------ 248 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~--a~~~IVLgAHYDSv~~------~d~f------ 248 (404)
+.++++||+++|+++|.+++.|. .+|||+++++. ..+.|+|+||+|++++ ++++
T Consensus 22 E~~v~~~l~~~l~~~g~~~~~D~------------~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~i 89 (355)
T 3kl9_A 22 EAPVRAYLREKLTPHVDEVVTDG------------LGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEI 89 (355)
T ss_dssp CHHHHHHHHHHHGGGSSEEEECT------------TSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCEEEECC------------CCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCCEEEEEec
Confidence 47889999999999999999887 58999999876 3579999999999985 1100
Q ss_pred --------------------------------------------------------------------------------
Q psy15910 249 -------------------------------------------------------------------------------- 248 (404)
Q Consensus 249 -------------------------------------------------------------------------------- 248 (404)
T Consensus 90 GG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~ 169 (355)
T 3kl9_A 90 GGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAIL 169 (355)
T ss_dssp SCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEE
T ss_pred CCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEE
Confidence
Q ss_pred --------CCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccC
Q psy15910 249 --------IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRG 320 (404)
Q Consensus 249 --------~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~ 320 (404)
-.|.||.+||+++||+++.+++ ..++.++.++|.+.||. |+.|++..+..+.
T Consensus 170 ~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~~~v~~~ft~qEEv--------G~~Ga~~a~~~~~-------- 229 (355)
T 3kl9_A 170 TANEKNIISKAWDNRYGVLMVSELAEALSG----QKLGNELYLGSNVQEEV--------GLRGAHTSTTKFD-------- 229 (355)
T ss_dssp CTTSSEEEESCHHHHHHHHHHHHHHHHHSS----CCCSSEEEEEEESCCTT--------TSHHHHHHHHHHC--------
T ss_pred ecCCCEEEeeccccHHHHHHHHHHHHHhhh----cCCCceEEEEEECcccc--------CcchhHHHHhccC--------
Confidence 1456777999999999998865 35788999999999998 7888877665432
Q ss_pred ccccccCCccEEEEeccCCCCC
Q psy15910 321 KTLTKLDRMDMLVLLDLLGTSN 342 (404)
Q Consensus 321 ~~~~~l~~I~~~IlLDmIG~~~ 342 (404)
-+.+|.+|+.-+.+
T Consensus 230 --------pd~~i~~D~~~a~d 243 (355)
T 3kl9_A 230 --------PEVFLAVDCSPAGD 243 (355)
T ss_dssp --------CSEEEEEEEEECCG
T ss_pred --------CCEEEEecCccCCC
Confidence 34578999865543
No 53
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=98.51 E-value=3.1e-08 Score=96.89 Aligned_cols=121 Identities=14% Similarity=0.022 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcC-----------CC------
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKI-----------MA------ 245 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~-----------~~------ 245 (404)
+.++++||+++|+++|++++.|.-.. .+ ...+|+|+++++ . +.|+|.||+||++ ..
T Consensus 36 e~~v~~~l~~~l~~~g~~v~~d~~~~----~~-~~~gnlia~~~g-~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~ 108 (321)
T 3cpx_A 36 EEPLKDFILEYIRSNAGSWSYQPVIY----AD-NDLQDCIVLVFG-N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKE 108 (321)
T ss_dssp CHHHHHHHHHHHHHHGGGSSSCCEEE----CS-GGGTTCEEEEES-S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHhhCCeEEEccccc----cc-cCCccEEEEecC-C-ceEEEEecCCcCCeEecccCCeEEcCChhhcc
Confidence 35678999999999999766554100 00 125799999876 4 6899999999994 10
Q ss_pred ---------CC-C--------------------CC-------------------CCCCchHHHHHHHHHHHHHHHhhcCC
Q psy15910 246 ---------SP-F--------------------IG-------------------ATDSAVPCAMLLYIARLMRQELSQLN 276 (404)
Q Consensus 246 ---------d~-f--------------------~G-------------------A~D~AsGvA~LLElAr~L~~~l~~~~ 276 (404)
++ + +| +.|+.+||+++|++++.+.
T Consensus 109 ~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~------- 181 (321)
T 3cpx_A 109 GYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTLE------- 181 (321)
T ss_dssp TCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------
T ss_pred cCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------
Confidence 10 0 12 5799999999999987642
Q ss_pred CCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCCccEEEEeccCCC
Q psy15910 277 QNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDRMDMLVLLDLLGT 340 (404)
Q Consensus 277 ~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~I~~~IlLDmIG~ 340 (404)
. +.++|++.||. ++.|++..+....+. . +.+++|.+|+...
T Consensus 182 --~-i~~~~t~~EEv--------G~~Ga~~a~~~~~~~-~-----------~~~~~i~~D~~~~ 222 (321)
T 3cpx_A 182 --H-GIIAFTCWEEH--------GGGSVAYLARWIYET-F-----------HVKQSLICDITWV 222 (321)
T ss_dssp --S-EEEEEESSTTT--------TCCSHHHHHHHHHHH-H-----------CCCEEEECCCEEC
T ss_pred --C-cEEEEECCccC--------chhcchhhhhccccc-c-----------CCCEEEEEeCccc
Confidence 2 89999999997 778998755321111 1 2467788887653
No 54
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.45 E-value=5.2e-07 Score=90.22 Aligned_cols=113 Identities=18% Similarity=0.200 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCC------CCC-----------
Q psy15910 185 KIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM------ASP----------- 247 (404)
Q Consensus 185 ~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~------~d~----------- 247 (404)
++++||+++|+++|.+++.|. .+|||++++++. +.|+|+||+|++++ .++
T Consensus 31 ~v~~~l~~~l~~~g~~~~~D~------------~GNvi~~~~g~~-~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~ 97 (354)
T 2vpu_A 31 GIRDIVVDVLKEVADEVKVDK------------LGNVIAHFKGSS-PRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVL 97 (354)
T ss_dssp THHHHHHHHHHTTCSEEEECT------------TCCEEEEECCSS-SEEEEECCCCBCEEEEEEECTTSCEEEEEESSCC
T ss_pred HHHHHHHHHHHHhCCEEEEcC------------CCeEEEEEcCCC-CEEEEEecccccceeEEEECCCCEEEEEccCCcc
Confidence 789999999999999999987 589999998765 79999999999985 110
Q ss_pred --------------------------------------------------------------------------------
Q psy15910 248 -------------------------------------------------------------------------------- 247 (404)
Q Consensus 248 -------------------------------------------------------------------------------- 247 (404)
T Consensus 98 ~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~ 177 (354)
T 2vpu_A 98 PETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEH 177 (354)
T ss_dssp GGGGTTCEEEEEETTEEEEEEECCCCSTTC---------CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSS
T ss_pred cccccCCEEEEEcCCCcEEEEEcCCCccccCcccccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCc
Confidence
Q ss_pred --CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccc
Q psy15910 248 --FIGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTK 325 (404)
Q Consensus 248 --f~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~ 325 (404)
.-.+-||-+||+++||+++.++ .++.++.++|++-||. |+-|++..+..+.
T Consensus 178 ~i~s~~lDnr~g~~~~l~~l~~l~------~~~~~v~~~ft~qEEV--------G~~ga~~aa~~i~------------- 230 (354)
T 2vpu_A 178 RFATPYLDDRICLYAMIEAARQLG------DHEADIYIVGSVQEEV--------GLRGARVASYAIN------------- 230 (354)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHCC------CCSSEEEEEECSCCTT--------TSHHHHHHHHHHC-------------
T ss_pred eEEEecCccHHHHHHHHHHHHHhh------cCCCeEEEEEECCccc--------CccchhhhhcccC-------------
Confidence 0245556699999999988763 2678999999999998 7778776554432
Q ss_pred cCCccEEEEeccCCC
Q psy15910 326 LDRMDMLVLLDLLGT 340 (404)
Q Consensus 326 l~~I~~~IlLDmIG~ 340 (404)
.+.+|.+|+.-+
T Consensus 231 ---pd~~i~~Dv~~a 242 (354)
T 2vpu_A 231 ---PEVGIAMDVTFA 242 (354)
T ss_dssp ---CSEEEEEEEEEC
T ss_pred ---CCEEEEeccccc
Confidence 346788887533
No 55
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.27 E-value=7.6e-09 Score=95.96 Aligned_cols=92 Identities=16% Similarity=0.198 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCCC------CC--CCCCCCCc
Q psy15910 184 LKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIMA------SP--FIGATDSA 255 (404)
Q Consensus 184 ~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~~------d~--f~GA~D~A 255 (404)
.++++||+++|+++|++|++|. .+||||+++++ .+.|+|+||+||+|+. ++ ..+..++.
T Consensus 30 ~~v~~~l~~~l~~~G~~v~~D~------------~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~ 96 (354)
T 2wzn_A 30 LGIRDIVVDVLKEVADEVKVDK------------LGNVIAHFKGS-SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGV 96 (354)
T ss_dssp GTHHHHHHHHHHTTSSEEEECT------------TCCEEEEECCS-SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSC
T ss_pred HHHHHHHHHHHHHcCCEEEEeC------------CCeEEEEECCC-CceEEEEeccccCCCcCCeeecCCceeeccCCCc
Confidence 4578999999999999999886 57999999875 4689999999999862 12 12223333
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc
Q psy15910 256 VPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA 291 (404)
Q Consensus 256 sGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~ 291 (404)
.+.++++..+..+... ......+.+++...||.
T Consensus 97 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ee~ 129 (354)
T 2wzn_A 97 LPETLVAQRIRFFTEK---GERYGVVGVLPPHLRRG 129 (354)
T ss_dssp CGGGGTTCEEEEEETT---EEEEEEECCCCGGGC--
T ss_pred cHHHHHHHHHHHhhcc---CCccceEEEeeeeeEec
Confidence 3433333322222211 12334566666777775
No 56
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.22 E-value=2e-06 Score=85.81 Aligned_cols=49 Identities=18% Similarity=0.161 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeCCCCCceEEEEEecCCcCC
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVNPTAPRALSLACHYDSKIM 244 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~g~a~~~IVLgAHYDSv~~ 244 (404)
+.++++||+++|+++|.+++.|. .+|||+++. ...+.|+|.||+|++++
T Consensus 30 E~~v~~~i~~~l~~~~~e~~~D~------------~Gnvi~~~g-~~~~~v~l~aHmDevG~ 78 (343)
T 3isx_A 30 EEEVRSIILEELEGHIDGHRIDG------------LGNLIVWKG-SGEKKVILDAHIDEIGV 78 (343)
T ss_dssp CHHHHHHHHHHHTTTCSEEEECT------------TCCEEEEEC-CCSSEEEEEEECCBCEE
T ss_pred hHHHHHHHHHHHHHhCCEEEECC------------CCCEEEEEC-CCCCEEEEEecccccce
Confidence 47889999999999999999987 689999984 35678999999999985
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=79.19 E-value=0.49 Score=48.32 Aligned_cols=62 Identities=15% Similarity=0.121 Sum_probs=37.0
Q ss_pred HhHHHHHHHHHHHHHhCCCeE--EEEcccCccCCCC----CceeeEEEEEeCCCC----CceEEEEEecCCcCC
Q psy15910 181 ENLLKIFQYIISELKSSGLDV--ETDTFSDTVPNFG----RLTFTNIIGHVNPTA----PRALSLACHYDSKIM 244 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~V--e~d~F~~~tp~~G----~~~~~NIIa~l~g~a----~~~IVLgAHYDSv~~ 244 (404)
+..-.|.++++++|++.|++- |.+.... .| .+ ....+||||...|+. .+.++++||.||..+
T Consensus 16 ~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l-~~-g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dspgl 87 (428)
T 2ijz_A 16 PTPFHATASLARRLEAAGYRRLDERDAWHT-ET-GGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSPCL 87 (428)
T ss_dssp HHHHHHHCCSHHHHHHHHHHHSCC----------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCSEE
T ss_pred CCHHHHHHHHHHHHHHcCCeEccccccccc-CC-CCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcCCe
Confidence 456777888888888888621 1111110 11 11 112379999887653 468999999999764
No 58
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=74.48 E-value=1.3 Score=45.66 Aligned_cols=57 Identities=14% Similarity=0.102 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhCCCeEEEEcc--cC--ccCCCCCce---eeE-EEEEeCCCC---CceEEEEEecCCcCC
Q psy15910 186 IFQYIISELKSSGLDVETDTF--SD--TVPNFGRLT---FTN-IIGHVNPTA---PRALSLACHYDSKIM 244 (404)
Q Consensus 186 a~~yI~~~L~~lG~~Ve~d~F--~~--~tp~~G~~~---~~N-IIa~l~g~a---~~~IVLgAHYDSv~~ 244 (404)
|.++++++|++.|++ +++.. .. -.| .+... .+| |||...|+. .+.++++||.||..+
T Consensus 40 av~~~~~~l~~sGfe-~l~e~~~~~w~l~~-g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dspgl 107 (461)
T 2glj_A 40 CVTELIKTAEKSGYR-NIEDILAKGETLKE-GDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSPRL 107 (461)
T ss_dssp THHHHHHHSCCSSCC-CTTCCCSTTTTCCT-TCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCCBB
T ss_pred HHHHHHHHHHHcCCh-hHHHHhhHhhccCC-CCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcCCe
Confidence 458999999999998 66554 21 122 22222 244 999877653 356999999999865
No 59
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=72.85 E-value=0.95 Score=46.16 Aligned_cols=73 Identities=16% Similarity=0.113 Sum_probs=47.8
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCcccccccCCCCCchhhHHHHHHHHhhhccccCccccccCC
Q psy15910 249 IGATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEAFNEWSAEDSIWGARHLAAKWERSHLQHRGKTLTKLDR 328 (404)
Q Consensus 249 ~GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~F~~W~~~DgL~GSr~la~~~~~~~~p~~~~~~~~l~~ 328 (404)
-.+-||-+||+++|++++.++ ....++.++| |-||. |..|++..+..+.. .-+.+
T Consensus 231 s~~lDdr~~~~~~l~al~~~~------~~~~~v~~~f-d~EEV--------Gs~ga~gA~s~~~~----------~~l~r 285 (428)
T 2ijz_A 231 GARLDNLLSCHAGLEALLNAE------GDENCILVCT-DHEEV--------GSCSHCGADGPFLE----------QVLRR 285 (428)
T ss_dssp CCCSSCSSTTTTTTTHHHHTT------SCSSSCEEEE-CBSCT--------TTTCHHHHSSCCTT----------TSCCS
T ss_pred eecCccHHHHHHHHHHHHhcc------cCCceEEEEE-ecccc--------CccchhhhhccccH----------HHHHH
Confidence 378899999999999987653 2456775555 99997 56666543332211 11223
Q ss_pred c-------------cEEEEeccCCCCCCcce
Q psy15910 329 M-------------DMLVLLDLLGTSNPRFY 346 (404)
Q Consensus 329 I-------------~~~IlLDmIG~~~p~f~ 346 (404)
| +.+|..|+.-+-+|.+.
T Consensus 286 i~~~~~~~~~~~~~s~~is~Dv~ha~~Pn~~ 316 (428)
T 2ijz_A 286 LLPEGDAFSRAIQRSLLVSADNAHGVHPNYA 316 (428)
T ss_dssp SSSSSSSSTTTTTSCCEEEECCCCCCCSSCG
T ss_pred hhhhhhHHHhhhhcCEEEEEecccccCCCCc
Confidence 3 78999999776555543
No 60
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=71.16 E-value=0.34 Score=49.88 Aligned_cols=37 Identities=16% Similarity=0.004 Sum_probs=30.1
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc
Q psy15910 250 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA 291 (404)
Q Consensus 250 GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~ 291 (404)
++-||-++|+++|++++.+++ .++.++.++|||-||.
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~-----~~~~~~~~~~~d~EEV 288 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE-----TPNKTAICFLVDKEEI 288 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC-----CCSSCEECCCBCSTTC
T ss_pred ecCccHHHHHHHHHHHHhhhc-----cCCceEEEEEEccccc
Confidence 666788999999999765431 4678999999999996
No 61
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=70.16 E-value=0.68 Score=47.62 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=29.9
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc
Q psy15910 250 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA 291 (404)
Q Consensus 250 GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~ 291 (404)
++-||-+||.++|++.+.+ .++.++.+++||-||.
T Consensus 246 ~~lDnr~~~~~~l~al~~~-------~~~~~~~~~~~d~EEV 280 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-------NPEKSIGVIFFDKEEI 280 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-------CCSSCEEEEEESCGGG
T ss_pred ecchhhHHHHHHHHHHHhc-------CCCceEEEEEEccccc
Confidence 7789999999999997764 2467899999999995
No 62
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=69.28 E-value=0.51 Score=48.62 Aligned_cols=36 Identities=19% Similarity=0.077 Sum_probs=29.9
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhcCCCCcCEEEEEecCccc
Q psy15910 250 GATDSAVPCAMLLYIARLMRQELSQLNQNLGLDLIFFDGEEA 291 (404)
Q Consensus 250 GA~D~AsGvA~LLElAr~L~~~l~~~~~~~tI~fVfFdgEE~ 291 (404)
++-||-++|+++|++++.++ .++.++.++|||-||.
T Consensus 258 ~~lDdr~~~~~~l~al~~~~------~~~~~~~~~~~d~EEV 293 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK------NAKKTCITILVDKEEV 293 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC------SCSSCEEEEEECCGGG
T ss_pred ecchhHHHHHHHHHHHHhhc------cCCCeEEEEEEccCCC
Confidence 66788999999999976542 3678999999999995
No 63
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=66.78 E-value=0.99 Score=47.05 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=28.9
Q ss_pred CCCCCchHHHHHHHHHHHHHHH---hhcCCCCcCEEEEEecCccc
Q psy15910 250 GATDSAVPCAMLLYIARLMRQE---LSQLNQNLGLDLIFFDGEEA 291 (404)
Q Consensus 250 GA~D~AsGvA~LLElAr~L~~~---l~~~~~~~tI~fVfFdgEE~ 291 (404)
++-||-+||.++|++.+.+... +. ..+...+ +++||-||.
T Consensus 282 ~~lDnr~~~~~~leaL~~~~~~~~~~~-~~~~~~v-~v~~dqEEV 324 (496)
T 3vat_A 282 PRLDNLHSCFCALQALIDSCSAPASLA-ADPHVRM-IALYDNEEV 324 (496)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSHHHHH-HCCSEEE-EEEESCGGG
T ss_pred eccccHHHHHHHHHHHHhhhccccccc-cCCCcEE-EEEEccCCc
Confidence 7889999999999998776421 00 0234455 999999996
No 64
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=63.84 E-value=5 Score=41.18 Aligned_cols=60 Identities=15% Similarity=-0.024 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCC----ceeeEEEEEeCCCC--CceEEEEEecCCcCC
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGR----LTFTNIIGHVNPTA--PRALSLACHYDSKIM 244 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~----~~~~NIIa~l~g~a--~~~IVLgAHYDSv~~ 244 (404)
.-.|.+++++.|++.|++- .++...-.| .+. ...+||||...|+. .+.++++||.|+..+
T Consensus 33 ~~h~v~~~~~~l~~~Gf~~-l~e~~~l~~-g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp~l 98 (450)
T 2glf_A 33 ERMTVKEIKRILDESGFVP-LEDFAGDPM-NMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSPRL 98 (450)
T ss_dssp HHHHHHHHHHHHHTTTCEE-TTSCCSCTT-SBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHHCcCEE-cccccCCCC-CCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccCCe
Confidence 4667899999999999863 111111112 111 11369999877753 368999999999754
No 65
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=58.17 E-value=3.3 Score=42.52 Aligned_cols=60 Identities=12% Similarity=0.098 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCCCC---ceeeEEEEEeC-CCC---CceEEEEEecCCcCC
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNFGR---LTFTNIIGHVN-PTA---PRALSLACHYDSKIM 244 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~---~~~~NIIa~l~-g~a---~~~IVLgAHYDSv~~ 244 (404)
.-.|.++++++|++.|++- .++...-.| .+. ...+|+|+.+. |+. ...-+++||.||..+
T Consensus 35 ~~hav~~~~~~l~~~Gf~~-l~e~~~l~~-g~~~~~~r~g~~i~a~~~G~~~~~~g~~ii~AH~Dspgl 101 (458)
T 1y7e_A 35 EREVTAYALDKAKKLGFIN-AEEKKNLMP-GDKIFYTCREKSVAFAIIGKNPIEDGMNFIVSHTDSPRL 101 (458)
T ss_dssp HHHHHHHHHHHHHTTTCEE-STTCCCCCT-TCEEECBCSSSCBCCEECCSSCGGGCCEECCCBCCCCBC
T ss_pred HHHHHHHHHHHHHHcCCcc-cccccccCC-CCeEEEECCCCEEEEEEeCCCCCCCCcEEEEEccCcCCe
Confidence 3578899999999999762 111110111 110 11345666554 542 223499999999865
No 66
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=55.45 E-value=10 Score=37.79 Aligned_cols=51 Identities=24% Similarity=0.188 Sum_probs=36.0
Q ss_pred cccchHHHHHHHhcCCCcccccceeccccccccccChHhHHHHHHHHHHHHHhCCCeEEEEccc
Q psy15910 144 TFLNRDFFNERINGGFPKVLIEGIISDNKSALDMNTIENLLKIFQYIISELKSSGLDVETDTFS 207 (404)
Q Consensus 144 ~~in~~~~~~~l~~~~~~~~~~gi~r~~~s~~~~~~~~~~~~a~~yI~~~L~~lG~~Ve~d~F~ 207 (404)
..|+.+++.+++..=.. ..|.+-| +++.++++||+++|+++|++++.+.|.
T Consensus 11 ~~i~~~~~~~~l~~Ls~------~~R~~Gs-------~g~~~a~~yi~~~~~~~Gl~~~~q~~~ 61 (421)
T 2ek8_A 11 KRTDAENMYNTIQFLSQ------APRVAGS-------PEELKAVRYIEQQFKSYGYHVEVQPFQ 61 (421)
T ss_dssp TTCCHHHHHHHHHHHTT------SCCCTTS-------HHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHhC------CCCCCCC-------HHHHHHHHHHHHHHHHCCCceEEEEEE
Confidence 34566677666652100 0333444 788999999999999999999988875
No 67
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=51.33 E-value=13 Score=37.58 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=24.8
Q ss_pred HhHHHHHHHHHHHHHhCCC-eEEEEccc
Q psy15910 181 ENLLKIFQYIISELKSSGL-DVETDTFS 207 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~-~Ve~d~F~ 207 (404)
+++.++.+||.++|+++|+ +|..|.|.
T Consensus 42 ~g~~~a~~~i~~~l~~~G~~~v~~q~f~ 69 (444)
T 3iib_A 42 EQDKVAVDWAIAKLQSLGFDRVYKEPVT 69 (444)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCceEeeeEE
Confidence 8899999999999999999 79888874
No 68
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=33.41 E-value=27 Score=37.33 Aligned_cols=25 Identities=16% Similarity=0.206 Sum_probs=21.2
Q ss_pred HhHHHHHHHHHHHHHhCCCe-EEEEc
Q psy15910 181 ENLLKIFQYIISELKSSGLD-VETDT 205 (404)
Q Consensus 181 ~~~~~a~~yI~~~L~~lG~~-Ve~d~ 205 (404)
+++.++++||.++|+++|++ +..+.
T Consensus 40 ~g~~~aa~yI~~~f~~~Gl~~v~~~~ 65 (640)
T 3kas_A 40 QKDENLALYVENQFREFKLSKVWRDQ 65 (640)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCccccccc
Confidence 88899999999999999996 55443
No 69
>2q22_A Uncharacterized protein; YP_323524.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PG4; 2.11A {Anabaena variabilis atcc 29413} SCOP: d.365.1.1
Probab=32.67 E-value=43 Score=29.13 Aligned_cols=59 Identities=10% Similarity=-0.064 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEcccCccCCC--CCceeeEEEEEeCCCCCceEEEEEecCC
Q psy15910 183 LLKIFQYIISELKSSGLDVETDTFSDTVPNF--GRLTFTNIIGHVNPTAPRALSLACHYDS 241 (404)
Q Consensus 183 ~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~--G~~~~~NIIa~l~g~a~~~IVLgAHYDS 241 (404)
..+|..-|+++.+++||....+.-....|++ .+...+++..+.....-+-|+|+||+|.
T Consensus 62 ~~~a~~ALr~~~~alg~~~~~~~~~~~GpVfLK~N~~tg~~yl~~y~G~~rGVLiscq~~~ 122 (139)
T 2q22_A 62 ADEGLLAMKTYSHALGYEVPIDLPVVEGPVYIKLNGKNGLCYLDSYAGHHRGVLVSCQSYY 122 (139)
T ss_dssp HHHHHHHHHHHHHHTTCCCC-CCCCCSSSEEEEEETTTCCEEEEECCSCCBEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCCEEEEecCCCCcEEEEecCCCccEEEEecccCC
Confidence 4677788889999999985443311112211 0123456666665555678999999985
No 70
>3eik_A Tata-box-binding protein; DNA-binding, initiation factor, nucleus, transcription; 1.90A {Encephalitozoon cuniculi} PDB: 3oci_A 3oc3_C
Probab=28.23 E-value=46 Score=31.02 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=31.0
Q ss_pred cChHhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeC
Q psy15910 178 NTIENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVN 226 (404)
Q Consensus 178 ~~~~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~ 226 (404)
.+.+....|.+-+.+.|+++|+++....|+ ..||+|+.+
T Consensus 105 kS~e~a~~A~~ki~~~L~~lG~~v~~~~fk----------IqNIvas~d 143 (218)
T 3eik_A 105 KSEKSSRMAAQRYAKIIHKLGFNATFDDFK----------IQNIVSSCD 143 (218)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCCCEEEE----------EEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCcccccce----------EEEEEEEEE
Confidence 455777888899999999999977655543 799999976
No 71
>1ytb_A Protein (tata binding protein (TBP)); protein-DNA complex, transcription/DNA complex; HET: DNA; 1.80A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1 PDB: 1ngm_A* 1tba_B 1nh2_A* 1ytf_A* 1tbp_A 1qna_A* 1qn3_A* 1qn5_A* 1qn6_A* 1qn7_A* 1qn8_A* 1qn9_A* 1qn4_A* 1qnb_A* 1qnc_A* 1qne_A* 1vok_A 1vol_B* 1vto_A* 1vtl_E* ...
Probab=25.06 E-value=45 Score=29.96 Aligned_cols=39 Identities=13% Similarity=0.234 Sum_probs=30.0
Q ss_pred cChHhHHHHHHHHHHHHHhCCCeEEEEcccCccCCCCCceeeEEEEEeC
Q psy15910 178 NTIENLLKIFQYIISELKSSGLDVETDTFSDTVPNFGRLTFTNIIGHVN 226 (404)
Q Consensus 178 ~~~~~~~~a~~yI~~~L~~lG~~Ve~d~F~~~tp~~G~~~~~NIIa~l~ 226 (404)
.+.+....|.+.+.+.|+++|+.+....| +..||+|+.+
T Consensus 67 ks~e~~~~a~~~i~~~L~~lg~~~~~~~~----------~i~NIvas~d 105 (180)
T 1ytb_A 67 KSEDDSKLASRKYARIIQKIGFAAKFTDF----------KIQNIVGSCD 105 (180)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCCCCCEEE----------EEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCcccccc----------eEEEEEEEEE
Confidence 34567788889999999999987654443 3789999976
Done!