Query psy15912
Match_columns 482
No_of_seqs 365 out of 2897
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 16:23:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 2E-43 7E-48 386.9 20.1 320 25-463 297-623 (632)
2 4ene_A CLC-EC1, H(+)/CL(-) exc 99.9 3.9E-22 1.3E-26 209.4 15.8 133 63-196 296-436 (446)
3 3nd0_A SLL0855 protein; CLC fa 99.9 4.3E-22 1.5E-26 209.8 15.5 135 62-197 302-444 (466)
4 1ots_A Voltage-gated CLC-type 99.9 5E-22 1.7E-26 209.7 15.3 134 63-197 311-452 (465)
5 2d4z_A Chloride channel protei 99.8 1.6E-20 5.5E-25 182.6 16.5 213 209-464 9-245 (250)
6 4esy_A CBS domain containing m 99.8 2.2E-19 7.6E-24 163.7 10.5 147 210-464 15-161 (170)
7 3lv9_A Putative transporter; C 99.8 6.2E-18 2.1E-22 150.1 15.5 124 209-464 19-144 (148)
8 3kh5_A Protein MJ1225; AMPK, A 99.8 5.6E-18 1.9E-22 165.3 15.3 182 212-462 83-278 (280)
9 2ef7_A Hypothetical protein ST 99.8 1.2E-17 4E-22 145.2 15.5 126 211-467 2-127 (133)
10 3ddj_A CBS domain-containing p 99.8 1.8E-18 6.2E-23 171.0 11.4 184 212-468 92-288 (296)
11 3hf7_A Uncharacterized CBS-dom 99.8 4.6E-18 1.6E-22 148.1 12.4 124 212-464 1-126 (130)
12 3i8n_A Uncharacterized protein 99.8 4.7E-18 1.6E-22 147.7 12.5 124 210-464 3-128 (130)
13 3kpb_A Uncharacterized protein 99.8 9.1E-18 3.1E-22 143.5 13.7 119 213-464 1-119 (122)
14 3lhh_A CBS domain protein; str 99.8 1.3E-17 4.6E-22 152.3 15.2 125 209-465 38-164 (172)
15 3oco_A Hemolysin-like protein 99.7 4.3E-18 1.5E-22 152.2 11.3 124 210-465 17-143 (153)
16 2rih_A Conserved protein with 99.7 2E-17 6.8E-22 145.5 14.6 122 212-464 4-127 (141)
17 3lfr_A Putative metal ION tran 99.7 4.2E-18 1.4E-22 149.4 9.9 123 212-464 2-126 (136)
18 3nqr_A Magnesium and cobalt ef 99.7 4.2E-18 1.4E-22 147.4 9.6 121 212-463 2-124 (127)
19 3jtf_A Magnesium and cobalt ef 99.7 1E-17 3.6E-22 145.4 11.1 121 211-464 3-125 (129)
20 2yzi_A Hypothetical protein PH 99.7 2.9E-17 9.9E-22 143.6 13.8 127 210-466 4-130 (138)
21 3gby_A Uncharacterized protein 99.7 1.2E-17 4E-22 144.6 10.6 123 211-464 3-125 (128)
22 2p9m_A Hypothetical protein MJ 99.7 2.2E-17 7.6E-22 144.2 12.5 126 209-464 4-135 (138)
23 3k2v_A Putative D-arabinose 5- 99.7 1.1E-17 3.6E-22 148.9 10.5 119 213-461 28-148 (149)
24 3k6e_A CBS domain protein; str 99.7 3.3E-17 1.1E-21 147.8 13.6 126 214-466 16-143 (156)
25 3fhm_A Uncharacterized protein 99.7 3.9E-17 1.3E-21 147.9 14.0 133 205-466 16-151 (165)
26 1pbj_A Hypothetical protein; s 99.7 4.5E-17 1.5E-21 139.6 13.3 121 213-464 1-121 (125)
27 4gqw_A CBS domain-containing p 99.7 3.2E-17 1.1E-21 145.0 12.1 139 211-465 3-143 (152)
28 3fv6_A YQZB protein; CBS domai 99.7 7.2E-17 2.5E-21 145.2 14.1 128 209-466 13-145 (159)
29 2o16_A Acetoin utilization pro 99.7 3.6E-17 1.2E-21 147.5 12.0 132 212-465 4-135 (160)
30 3lqn_A CBS domain protein; csg 99.7 4.6E-17 1.6E-21 144.5 12.2 134 208-467 10-145 (150)
31 3sl7_A CBS domain-containing p 99.7 3.8E-17 1.3E-21 149.1 11.6 152 212-465 3-156 (180)
32 1o50_A CBS domain-containing p 99.7 1.2E-16 4.2E-21 143.2 14.6 142 208-465 11-153 (157)
33 3oi8_A Uncharacterized protein 99.7 1.8E-17 6.3E-22 148.8 8.4 119 210-460 35-155 (156)
34 3kxr_A Magnesium transporter, 99.7 8.7E-17 3E-21 151.7 13.3 123 212-469 53-178 (205)
35 1y5h_A Hypothetical protein RV 99.7 4.2E-17 1.4E-21 141.6 10.0 125 209-463 4-129 (133)
36 3ocm_A Putative membrane prote 99.7 1.3E-16 4.4E-21 146.3 13.4 124 210-466 33-158 (173)
37 2yzq_A Putative uncharacterize 99.7 8.4E-17 2.9E-21 157.4 12.1 197 211-464 58-278 (282)
38 2rc3_A CBS domain; in SITU pro 99.7 2.5E-16 8.6E-21 137.2 13.7 122 213-464 6-130 (135)
39 2j9l_A Chloride channel protei 99.7 2.7E-16 9.1E-21 144.2 14.4 154 208-467 6-167 (185)
40 3ctu_A CBS domain protein; str 99.7 1.4E-16 4.9E-21 142.4 11.7 131 211-468 13-145 (156)
41 2pfi_A Chloride channel protei 99.7 3.1E-16 1.1E-20 140.7 14.0 134 210-467 10-149 (164)
42 3t4n_C Nuclear protein SNF4; C 99.7 2.9E-16 9.8E-21 157.0 15.0 178 214-464 115-319 (323)
43 2v8q_E 5'-AMP-activated protei 99.7 9.9E-17 3.4E-21 161.0 11.4 175 214-466 119-324 (330)
44 2emq_A Hypothetical conserved 99.7 2.9E-16 9.9E-21 140.3 12.9 133 209-467 7-141 (157)
45 1pvm_A Conserved hypothetical 99.7 4.6E-16 1.6E-20 143.4 14.5 125 212-464 8-132 (184)
46 3ddj_A CBS domain-containing p 99.7 9.4E-17 3.2E-21 158.6 10.5 175 207-464 14-213 (296)
47 3l2b_A Probable manganase-depe 99.7 1.5E-16 5.1E-21 153.4 10.9 60 405-464 183-243 (245)
48 1yav_A Hypothetical protein BS 99.7 2.3E-16 7.9E-21 141.6 10.9 133 209-467 10-144 (159)
49 2nyc_A Nuclear protein SNF4; b 99.7 6.9E-16 2.4E-20 135.3 13.0 126 211-464 6-140 (144)
50 2v8q_E 5'-AMP-activated protei 99.7 1.2E-15 4E-20 153.2 16.2 183 210-464 32-250 (330)
51 2yzq_A Putative uncharacterize 99.7 1.7E-16 5.7E-21 155.2 9.3 169 213-460 1-179 (282)
52 3kh5_A Protein MJ1225; AMPK, A 99.7 7.6E-16 2.6E-20 150.1 13.8 168 216-463 7-203 (280)
53 4fry_A Putative signal-transdu 99.7 7.8E-16 2.7E-20 137.7 12.8 127 212-468 6-138 (157)
54 2uv4_A 5'-AMP-activated protei 99.6 3.9E-16 1.3E-20 139.2 10.5 127 207-463 17-149 (152)
55 1vr9_A CBS domain protein/ACT 99.6 5.7E-16 1.9E-20 146.7 11.7 120 212-466 12-131 (213)
56 2qrd_G Protein C1556.08C; AMPK 99.6 1.9E-15 6.6E-20 151.7 14.7 179 216-467 110-317 (334)
57 3pc3_A CG1753, isoform A; CBS, 99.6 2.2E-15 7.5E-20 161.6 15.2 152 185-467 356-513 (527)
58 2oux_A Magnesium transporter; 99.6 1E-15 3.5E-20 151.6 11.4 121 211-466 135-260 (286)
59 3t4n_C Nuclear protein SNF4; C 99.6 3.5E-15 1.2E-19 149.1 14.7 180 210-464 27-247 (323)
60 2qrd_G Protein C1556.08C; AMPK 99.6 6.1E-15 2.1E-19 148.1 15.7 180 210-464 19-242 (334)
61 2yvy_A MGTE, Mg2+ transporter 99.6 3.1E-15 1E-19 147.4 12.9 119 212-465 134-257 (278)
62 2zy9_A Mg2+ transporter MGTE; 99.5 1.9E-14 6.7E-19 152.1 11.9 121 211-466 153-278 (473)
63 3usb_A Inosine-5'-monophosphat 99.5 1.2E-13 4E-18 147.3 10.6 120 214-465 114-234 (511)
64 4fxs_A Inosine-5'-monophosphat 99.4 3.2E-14 1.1E-18 151.1 2.3 120 214-467 90-211 (496)
65 1zfj_A Inosine monophosphate d 99.4 1.1E-12 3.8E-17 139.4 13.3 118 214-465 91-211 (491)
66 4avf_A Inosine-5'-monophosphat 99.4 4.8E-14 1.6E-18 149.6 0.3 121 213-468 88-210 (490)
67 1vrd_A Inosine-5'-monophosphat 99.4 8E-14 2.8E-18 148.3 0.5 120 213-466 95-216 (494)
68 4af0_A Inosine-5'-monophosphat 99.3 1.3E-13 4.6E-18 144.1 0.5 120 217-468 142-261 (556)
69 1me8_A Inosine-5'-monophosphat 99.3 2E-13 6.9E-18 145.4 0.3 126 212-467 95-223 (503)
70 1jcn_A Inosine monophosphate d 99.3 1.3E-13 4.4E-18 147.4 -4.4 172 153-465 47-233 (514)
71 2cu0_A Inosine-5'-monophosphat 99.2 3.1E-12 1.1E-16 135.8 -0.2 114 214-464 94-207 (486)
72 4esy_A CBS domain containing m 98.8 6.2E-09 2.1E-13 94.1 7.2 56 407-462 18-73 (170)
73 3gby_A Uncharacterized protein 98.6 4.6E-08 1.6E-12 83.8 6.8 58 406-464 4-61 (128)
74 3lv9_A Putative transporter; C 98.6 1.1E-07 3.6E-12 83.6 8.9 60 406-465 22-84 (148)
75 2rih_A Conserved protein with 98.6 9.4E-08 3.2E-12 83.1 8.5 71 406-476 4-76 (141)
76 3ghd_A A cystathionine beta-sy 98.6 8.7E-08 3E-12 74.1 7.1 47 417-464 2-48 (70)
77 3k2v_A Putative D-arabinose 5- 98.6 9.3E-08 3.2E-12 84.1 7.2 58 407-464 28-87 (149)
78 3fio_A A cystathionine beta-sy 98.6 1.3E-07 4.6E-12 72.0 7.2 48 416-464 1-48 (70)
79 2p9m_A Hypothetical protein MJ 98.6 1.2E-07 4E-12 81.9 7.4 58 407-464 8-66 (138)
80 2ef7_A Hypothetical protein ST 98.5 2.1E-07 7E-12 79.9 8.8 69 407-476 4-72 (133)
81 2yzi_A Hypothetical protein PH 98.5 1.4E-07 4.9E-12 81.4 7.7 55 407-461 7-61 (138)
82 3lfr_A Putative metal ION tran 98.5 9.9E-08 3.4E-12 82.8 6.6 58 407-464 3-63 (136)
83 2d4z_A Chloride channel protei 98.5 1.9E-07 6.6E-12 90.3 9.1 61 405-465 11-73 (250)
84 3l2b_A Probable manganase-depe 98.5 1.7E-07 5.7E-12 89.7 7.9 58 407-464 7-64 (245)
85 3kpb_A Uncharacterized protein 98.5 1.5E-07 5E-12 79.5 6.7 57 408-464 2-58 (122)
86 1pbj_A Hypothetical protein; s 98.5 1.7E-07 5.8E-12 79.3 7.1 56 408-464 2-57 (125)
87 3ghd_A A cystathionine beta-sy 98.5 2.8E-07 9.6E-12 71.2 7.5 46 223-312 2-47 (70)
88 2o16_A Acetoin utilization pro 98.5 1.7E-07 5.8E-12 83.6 7.2 58 407-464 5-62 (160)
89 3jtf_A Magnesium and cobalt ef 98.5 1.8E-07 6.2E-12 80.3 7.1 57 407-463 5-64 (129)
90 3org_A CMCLC; transporter, tra 98.5 1.6E-07 5.5E-12 102.6 8.4 125 60-186 73-212 (632)
91 3k6e_A CBS domain protein; str 98.5 1.4E-07 4.9E-12 84.3 6.4 59 408-466 16-76 (156)
92 3nqr_A Magnesium and cobalt ef 98.4 1.9E-07 6.5E-12 79.8 6.0 57 407-463 3-62 (127)
93 3fhm_A Uncharacterized protein 98.4 3.1E-07 1.1E-11 82.3 7.3 62 405-466 22-86 (165)
94 3ctu_A CBS domain protein; str 98.4 3E-07 1E-11 81.4 6.4 58 408-465 16-75 (156)
95 1vr9_A CBS domain protein/ACT 98.4 3.1E-07 1.1E-11 86.3 6.9 60 212-314 71-130 (213)
96 3lhh_A CBS domain protein; str 98.4 5.2E-07 1.8E-11 81.6 8.1 68 407-476 42-112 (172)
97 3fv6_A YQZB protein; CBS domai 98.4 5.1E-07 1.7E-11 80.3 7.7 56 407-463 17-72 (159)
98 3lqn_A CBS domain protein; csg 98.4 3.1E-07 1.1E-11 80.6 6.1 58 406-463 14-73 (150)
99 3oi8_A Uncharacterized protein 98.4 3.2E-07 1.1E-11 81.5 6.3 57 407-463 38-97 (156)
100 1ots_A Voltage-gated CLC-type 98.4 4.6E-07 1.6E-11 95.3 8.4 122 60-185 100-232 (465)
101 1y5h_A Hypothetical protein RV 98.4 2.4E-07 8.3E-12 79.5 5.2 55 407-461 8-62 (133)
102 1yav_A Hypothetical protein BS 98.4 3.9E-07 1.3E-11 80.9 6.4 58 407-464 14-73 (159)
103 4gqw_A CBS domain-containing p 98.4 4.6E-07 1.6E-11 79.1 6.7 56 407-462 5-62 (152)
104 2emq_A Hypothetical conserved 98.4 5E-07 1.7E-11 79.7 6.9 58 406-463 10-69 (157)
105 3oco_A Hemolysin-like protein 98.4 4.7E-07 1.6E-11 80.0 6.5 60 407-466 20-83 (153)
106 1pvm_A Conserved hypothetical 98.4 7.2E-07 2.5E-11 81.4 7.9 58 407-464 9-66 (184)
107 3i8n_A Uncharacterized protein 98.4 2.8E-07 9.7E-12 79.1 4.8 58 407-464 6-66 (130)
108 3hf7_A Uncharacterized CBS-dom 98.4 4E-07 1.4E-11 78.3 5.8 58 407-464 2-62 (130)
109 2pfi_A Chloride channel protei 98.4 5.8E-07 2E-11 79.8 6.9 59 406-464 12-72 (164)
110 3nd0_A SLL0855 protein; CLC fa 98.3 1.1E-06 3.8E-11 92.3 9.3 121 60-185 96-227 (466)
111 3sl7_A CBS domain-containing p 98.3 5.7E-07 1.9E-11 81.1 5.5 56 407-462 4-61 (180)
112 2rc3_A CBS domain; in SITU pro 98.3 1.1E-06 3.7E-11 75.6 6.8 54 408-462 7-63 (135)
113 2nyc_A Nuclear protein SNF4; b 98.3 1.6E-06 5.5E-11 75.0 7.8 57 408-464 9-68 (144)
114 2j9l_A Chloride channel protei 98.3 1.1E-06 3.7E-11 79.7 6.9 60 406-465 10-77 (185)
115 4ene_A CLC-EC1, H(+)/CL(-) exc 98.3 2.3E-06 7.8E-11 89.6 10.1 121 61-186 86-218 (446)
116 1o50_A CBS domain-containing p 98.3 1.1E-06 3.7E-11 77.9 6.5 59 405-464 14-73 (157)
117 3ocm_A Putative membrane prote 98.2 1.9E-06 6.7E-11 78.2 8.0 58 407-464 36-96 (173)
118 3fio_A A cystathionine beta-sy 98.2 3.9E-06 1.3E-10 63.6 7.5 48 222-313 1-48 (70)
119 2uv4_A 5'-AMP-activated protei 98.2 3.4E-06 1.1E-10 74.3 8.1 57 406-464 22-78 (152)
120 3pc3_A CG1753, isoform A; CBS, 98.1 3.6E-06 1.2E-10 89.9 8.8 71 406-476 383-456 (527)
121 4fry_A Putative signal-transdu 98.1 3.9E-06 1.3E-10 74.1 5.8 56 408-464 8-69 (157)
122 3kxr_A Magnesium transporter, 98.0 1E-05 3.4E-10 75.6 7.3 55 408-462 55-112 (205)
123 2oux_A Magnesium transporter; 97.9 1.3E-05 4.5E-10 78.7 6.3 56 407-462 137-197 (286)
124 2yvy_A MGTE, Mg2+ transporter 97.7 4.4E-05 1.5E-09 74.5 7.4 55 408-462 136-195 (278)
125 4fxs_A Inosine-5'-monophosphat 97.5 6.3E-05 2.2E-09 79.6 5.4 53 408-460 90-142 (496)
126 3usb_A Inosine-5'-monophosphat 97.4 0.00069 2.3E-08 71.9 11.6 60 212-314 174-234 (511)
127 1me8_A Inosine-5'-monophosphat 97.4 5.1E-05 1.7E-09 80.6 2.2 59 212-313 160-220 (503)
128 2zy9_A Mg2+ transporter MGTE; 97.3 0.00025 8.6E-09 74.6 7.1 61 212-315 218-278 (473)
129 1vrd_A Inosine-5'-monophosphat 97.2 4.9E-05 1.7E-09 80.4 0.1 54 408-461 96-149 (494)
130 1zfj_A Inosine monophosphate d 97.2 0.00038 1.3E-08 73.5 6.8 54 408-461 91-146 (491)
131 4avf_A Inosine-5'-monophosphat 96.9 0.00015 5E-09 76.7 0.0 52 408-460 89-140 (490)
132 1jcn_A Inosine monophosphate d 96.8 0.00016 5.4E-09 76.9 -0.5 55 408-462 109-166 (514)
133 4af0_A Inosine-5'-monophosphat 96.4 0.0006 2E-08 71.7 0.1 51 410-460 141-194 (556)
134 2cu0_A Inosine-5'-monophosphat 96.3 0.0014 4.7E-08 69.2 2.5 58 212-312 149-206 (486)
135 1tif_A IF3-N, translation init 26.6 77 0.0026 24.2 4.3 26 437-462 12-37 (78)
136 3fan_A Non-structural protein; 25.2 30 0.001 31.7 2.0 25 436-460 124-148 (213)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=2e-43 Score=386.89 Aligned_cols=320 Identities=26% Similarity=0.418 Sum_probs=237.5
Q ss_pred chHHHHHHhcCCC----CchhHHHHHHHHHHHHHHHHHhccccccCCCchhhhhhhccccccccCCCcccccccCCCCcc
Q psy15912 25 PEKSVRTMLHDPK----GAFGVFSLSVFVVTYFLLSVWTYGVSVSGGGMPEKYDFLSKDNVWKSNGKPRSLSEQLSDSGG 100 (482)
Q Consensus 25 ~~~~i~~l~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~G~~~~~~~l~~~~~~~~~~~~~~~~~~~G~~gG 100 (482)
+++.++.+|++.. +.+.+..+++++++|++++++++|.++| ||
T Consensus 297 ~~~~i~~l~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~p---------------------------------GG 343 (632)
T 3org_A 297 PRATINDLFKAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLP---------------------------------AG 343 (632)
T ss_dssp CHHHHHHHHSCC----------CCSSHHHHHHHHHHHHHTTSSSB---------------------------------CB
T ss_pred HHHHHHHHHcCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCc---------------------------------ch
Confidence 5778888887532 2333446788899999999999999999 99
Q ss_pred eehHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhhhchhHHHHHHHHHhhCCchhhHHHHHHHHHHHH
Q psy15912 101 VFIPCLLTGAAWGRLFSLFLQSIFPEATWIDPGKYALIGAAAQLGGVVRMTISLTIILIEATGNISFGLPLMLTLITAKW 180 (482)
Q Consensus 101 ~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~a~vG~aa~~~g~~~~p~s~~vi~~Eltg~~~~~~Pl~ia~~ia~~ 180 (482)
+|+|+|++||++|+++|.+++.++|.. ++|+.||++||||+++|++|+|++++ +++||||++++++|+|+++++||+
T Consensus 344 if~P~l~iGA~~G~~~g~~~~~~~p~~--~~p~~~a~vGmaa~~~~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~ 420 (632)
T 3org_A 344 VFVPSFLIGAGFGRLYGELMRVVFGNA--IVPGSYAVVGAAAFTAGVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVI 420 (632)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCTT--SCHHHHHHHHHHHHHHHHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCcc--cchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHH
Confidence 999999999999999999999888864 68999999999999999999999875 899999999999999999999999
Q ss_pred HhhhcCCChhHHHHHHcCCCCCCCCCCCCccccchhhccc--CCeeEecCCCCHHHHHHHHH-hCCCCeeeEecCCCCCC
Q psy15912 181 IGDFFTEGLYDIHIQLSGIPLLAWDPPPLSSNITARIVKS--HPVICLRPLETVGNIIDVLK-ATSHNGFPIVDVEPMTK 257 (482)
Q Consensus 181 v~~~~~~siy~~~L~~~g~p~l~~~~~~~l~~l~a~dvM~--~~~~~l~~~~~i~~~~~~l~-~~~~~~fPVVd~~~~~~ 257 (482)
+++.+++++|+.+++.+++|+++....+..+.++|+|+|+ +++.+++++++++++.+.|+ +++++.+||||++
T Consensus 421 v~~~~~~~iY~~~~~~k~lp~l~~~~~~~~~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~---- 496 (632)
T 3org_A 421 VGNAFNRSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN---- 496 (632)
T ss_dssp HHHHHCCCHHHHHHHHTTCCEEEEECTTCCTTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT----
T ss_pred HHHHhCCCHHHHHHHhcCCCccccccccccccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC----
Confidence 9999999999999999999987654445568899999999 89999999999999999999 8999999999975
Q ss_pred CCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhcc
Q psy15912 258 HSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEY 337 (482)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~ 337 (482)
++++|+|+++|+.+.+.+...... .+ ....
T Consensus 497 ---------------------------------------~~lvGiVt~~DL~~~l~~~~~~~~--~~---~~~~------ 526 (632)
T 3org_A 497 ---------------------------------------GYLLGAISRKEIVDRLQHVLEDVP--EP---IAGH------ 526 (632)
T ss_dssp ---------------------------------------CBBCCEESHHHHTTTTTTC----------------------
T ss_pred ---------------------------------------CeEEEEEEHHHHHHHHHHHhhhcc--cc---cccc------
Confidence 689999999999876543210000 00 0000
Q ss_pred ccccccCCCCccccchhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCc
Q psy15912 338 RCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSP 417 (482)
Q Consensus 338 ~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p 417 (482)
...-....+++.+..+.. ..... ..... ...+ + +.... ...-+++++|+++|
T Consensus 527 ----------~~~~~~~~~~l~~~~~~~-~~~~~---~~~~~--~~~e---~----~~~~~-----~~~~~v~~iMt~~p 578 (632)
T 3org_A 527 ----------RTLVLLDAADLSENIEGL-VDETP---SGEHS--SKGK---R----TATVL-----EPTSSLVVPCDVSP 578 (632)
T ss_dssp ------------------------------------------------------------------------CCSCCCCC
T ss_pred ----------cceeccCHHHHHhhcccC-CCCCc---ccchh--hhcc---c----ceEee-----ccccccchhhcCCC
Confidence 000000000000000000 00000 00000 0000 0 00000 01114899999999
Q ss_pred eeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHH
Q psy15912 418 FSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYR 463 (482)
Q Consensus 418 ~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~ 463 (482)
++|++++++.++.++|++++.+++||+ ++|+++||||++|+++..
T Consensus 579 itV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~ 623 (632)
T 3org_A 579 IVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGY 623 (632)
T ss_dssp CEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECC
T ss_pred ceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHH
Confidence 999999999999999999999999999 789999999999999764
No 2
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.88 E-value=3.9e-22 Score=209.45 Aligned_cols=133 Identities=24% Similarity=0.406 Sum_probs=122.9
Q ss_pred cccCCCchhhhhhhcccccccc-----CCCc--ccccccCCCCcceehHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHH
Q psy15912 63 SVSGGGMPEKYDFLSKDNVWKS-----NGKP--RSLSEQLSDSGGVFIPCLLTGAAWGRLFSLFLQSIFPEATWIDPGKY 135 (482)
Q Consensus 63 ~~~g~G~~~~~~~l~~~~~~~~-----~~~~--~~~~~~~G~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~ 135 (482)
.+.|+||+.++.+++|+..|.. +.|+ |++|+|+|.+||+|+|+|++||++|+++|.+++.++|... .+|+.|
T Consensus 296 ~~~G~G~~~i~~~~~~~~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~~-~~~~~~ 374 (446)
T 4ene_A 296 ATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYH-LEAGTF 374 (446)
T ss_dssp GGSSCCSTHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGGGT-CCHHHH
T ss_pred hhcCCcHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHHHHHHHHHHhCCccc-cCHHHH
Confidence 5689999999999999977643 3565 9999999999999999999999999999999999988753 789999
Q ss_pred HHHHHHHHhhhhhchhHHHHHHHHHhhCCchhhHHHHHHHHHHHHHhhhcC-CChhHHHHHH
Q psy15912 136 ALIGAAAQLGGVVRMTISLTIILIEATGNISFGLPLMLTLITAKWIGDFFT-EGLYDIHIQL 196 (482)
Q Consensus 136 a~vG~aa~~~g~~~~p~s~~vi~~Eltg~~~~~~Pl~ia~~ia~~v~~~~~-~siy~~~L~~ 196 (482)
+++||+|++++++|+|++++++++||||++++++|+|+++++|+++++.++ +++|+.++++
T Consensus 375 a~vGmaa~~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~~~~~~~iY~~~l~r 436 (446)
T 4ene_A 375 AIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILAR 436 (446)
T ss_dssp HHHHHTHHHHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 999999999999999999999999999999999999999999999999986 8999998765
No 3
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.87 E-value=4.3e-22 Score=209.84 Aligned_cols=135 Identities=19% Similarity=0.339 Sum_probs=124.0
Q ss_pred ccccCCCchhhhhhhcccccccc-----CCCc--ccccccCCCCcceehHHHHHHHHHHHHHHHHHHHhcCCCCCCchhH
Q psy15912 62 VSVSGGGMPEKYDFLSKDNVWKS-----NGKP--RSLSEQLSDSGGVFIPCLLTGAAWGRLFSLFLQSIFPEATWIDPGK 134 (482)
Q Consensus 62 ~~~~g~G~~~~~~~l~~~~~~~~-----~~~~--~~~~~~~G~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~ 134 (482)
-.+.|+||+.++.+++|+..+.. +.|+ |++|+|+|.+||+|+|+|++||++|+++|.+++.++|... .+|+.
T Consensus 302 p~~~G~G~~~i~~~~~~~~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~~-~~~~~ 380 (466)
T 3nd0_A 302 LPLTDGGDNAVLWAFNSQSHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMARHFHLLFPSQI-PEPAV 380 (466)
T ss_dssp SSCSSSSHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHHHHHHHHHHCTTTC-SSTHH
T ss_pred HHHcCCcHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHHHHHHHHHhCCccc-cCHHH
Confidence 46789999999999999977643 3565 9999999999999999999999999999999999998653 78999
Q ss_pred HHHHHHHHHhhhhhchhHHHHHHHHHhhCCchhhHHHHHHHHHHHHHhhhcC-CChhHHHHHHc
Q psy15912 135 YALIGAAAQLGGVVRMTISLTIILIEATGNISFGLPLMLTLITAKWIGDFFT-EGLYDIHIQLS 197 (482)
Q Consensus 135 ~a~vG~aa~~~g~~~~p~s~~vi~~Eltg~~~~~~Pl~ia~~ia~~v~~~~~-~siy~~~L~~~ 197 (482)
|+++||+|++++++|+|++++++++||||++++++|+|+++++|+++++.++ +++|+.++++.
T Consensus 381 ~a~vGmaa~~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~~~~~~~iY~~~l~r~ 444 (466)
T 3nd0_A 381 MAIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEALGGKPIYTVLLERT 444 (466)
T ss_dssp HHHHTTSHHHHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999985 89999988764
No 4
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.87 E-value=5e-22 Score=209.72 Aligned_cols=134 Identities=24% Similarity=0.405 Sum_probs=123.1
Q ss_pred cccCCCchhhhhhhcccccccc-----CCCc--ccccccCCCCcceehHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHH
Q psy15912 63 SVSGGGMPEKYDFLSKDNVWKS-----NGKP--RSLSEQLSDSGGVFIPCLLTGAAWGRLFSLFLQSIFPEATWIDPGKY 135 (482)
Q Consensus 63 ~~~g~G~~~~~~~l~~~~~~~~-----~~~~--~~~~~~~G~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~ 135 (482)
.+.|+||+.++.+++++..+.. +.|+ |++|+|+|.+||+|+|+|++||++|+++|.+++.++|.. ..+|+.|
T Consensus 311 ~~lG~G~~~i~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~-~~~~~~~ 389 (465)
T 1ots_A 311 ATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQY-HLEAGTF 389 (465)
T ss_dssp GGSSCSTTHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGGG-TCCHHHH
T ss_pred hhcCChHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHHCCcc-cccHHHH
Confidence 6789999999999999865543 3565 999999999999999999999999999999999988875 3789999
Q ss_pred HHHHHHHHhhhhhchhHHHHHHHHHhhCCchhhHHHHHHHHHHHHHhhhcC-CChhHHHHHHc
Q psy15912 136 ALIGAAAQLGGVVRMTISLTIILIEATGNISFGLPLMLTLITAKWIGDFFT-EGLYDIHIQLS 197 (482)
Q Consensus 136 a~vG~aa~~~g~~~~p~s~~vi~~Eltg~~~~~~Pl~ia~~ia~~v~~~~~-~siy~~~L~~~ 197 (482)
+++||+|++++++|+|++++++++||||++++++|+|+++++|+++++.++ +++|+.+++++
T Consensus 390 alvGmaa~~a~v~raPlt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~~~~~~iY~~~l~~~ 452 (465)
T 1ots_A 390 AIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILART 452 (465)
T ss_dssp HHHHHTHHHHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999986 89999998765
No 5
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.84 E-value=1.6e-20 Score=182.59 Aligned_cols=213 Identities=18% Similarity=0.212 Sum_probs=118.2
Q ss_pred CccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCC
Q psy15912 209 LSSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKG 288 (482)
Q Consensus 209 ~l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (482)
....++|+|+|+++++++.+++++.++.++|.++++++|||||+++
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~---------------------------------- 54 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPD---------------------------------- 54 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTT----------------------------------
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCC----------------------------------
Confidence 5678999999999999999999999999999999999999999752
Q ss_pred CCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCC-CCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhh--
Q psy15912 289 DASRKESPGRLVGLILRSQLIILIKHKIYKENQN-WPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHK-- 365 (482)
Q Consensus 289 ~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~-- 365 (482)
+++++|+|+++||++++.......... .....+... ........+...............+-....+..
T Consensus 55 -------~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (250)
T 2d4z_A 55 -------TNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEE-GRNGETGASFTGEAESSFAYIDQEDAEGQQREGLE 126 (250)
T ss_dssp -------TCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC------------------------------------
T ss_pred -------CCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccccc-ccccccccccccCCcceeeeccccccccccccCcc
Confidence 268999999999998876543111110 000000000 000000000000000000000000000000000
Q ss_pred hhccCCCCCCCCC-----ChhhhhhhCC-------CCCCCCccccCcc--------cccccccccc-ccccCceeeeCCC
Q psy15912 366 IYKENQNWPDDQL-----SSEIFHAEYP-------RYPSVNDLVVSEN--------DRSFTVKLNL-FMNTSPFSVQDST 424 (482)
Q Consensus 366 ~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~~~~~~~~--------~~~~~i~v~~-im~~~p~~V~~~~ 424 (482)
........+.... .-..+...+. .++...++.++.+ .....+++++ +|+++|++|.+++
T Consensus 127 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~t 206 (250)
T 2d4z_A 127 AVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGT 206 (250)
T ss_dssp ----------------------------------------CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTC
T ss_pred ccCCcccCCccccccccccccccccccccccccccccCcccccccChhhhhhHHHHhcCceeccccccccCCCeEECCCC
Confidence 0000000000000 0000000000 0111222222221 1445667775 7999999999999
Q ss_pred CHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 425 SLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 425 ~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
+|.+|+.+|+++|++|+||++ +|+++|||||+||+++..
T Consensus 207 sL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 207 SLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp BHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 999999999999999999996 799999999999998764
No 6
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.79 E-value=2.2e-19 Score=163.66 Aligned_cols=147 Identities=20% Similarity=0.324 Sum_probs=111.0
Q ss_pred ccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 210 SSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 210 l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
+..++|+|+|+++++++.+++++.++++.|.+++++++||+|++
T Consensus 15 l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~------------------------------------ 58 (170)
T 4esy_A 15 IRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN------------------------------------ 58 (170)
T ss_dssp HHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT------------------------------------
T ss_pred HcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC------------------------------------
Confidence 45789999999999999999999999999999999999999976
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
|+++|+||.+|+++......... .... ....
T Consensus 59 -------g~lvGiit~~Dll~~~~~~~~~~---------~~~~-----------------------------~~~~---- 89 (170)
T 4esy_A 59 -------GHLVGIITESDFLRGSIPFWIYE---------ASEI-----------------------------LSRA---- 89 (170)
T ss_dssp -------SCEEEEEEGGGGGGGTCCTTHHH---------HHHH-----------------------------HTTT----
T ss_pred -------ccEEEEEEHHHHHHHHhhccccc---------hhhh-----------------------------hhhc----
Confidence 79999999999875433211000 0000 0000
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCe
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNH 449 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~ 449 (482)
.....+.... ......+++++|+++++++++++++.+|.++|.+.+++++||+| +|+
T Consensus 90 --------~~~~~~~~~~--------------~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~ 146 (170)
T 4esy_A 90 --------IPAPEVEHLF--------------ETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGV 146 (170)
T ss_dssp --------SCHHHHHHHH--------------HHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTE
T ss_pred --------cchhhHHhhh--------------ccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCE
Confidence 0000000000 00123479999999999999999999999999999999999997 699
Q ss_pred EEEEEeHHHhHHHHH
Q psy15912 450 VVGMITRKDLARYRV 464 (482)
Q Consensus 450 lvGIITr~DLl~~~~ 464 (482)
++||||++|++++..
T Consensus 147 lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 147 PVGIVTRRDLLKLLL 161 (170)
T ss_dssp EEEEEEHHHHTTTSC
T ss_pred EEEEEEHHHHHHHHH
Confidence 999999999998753
No 7
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.77 E-value=6.2e-18 Score=150.14 Aligned_cols=124 Identities=14% Similarity=0.266 Sum_probs=110.8
Q ss_pred CccccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 209 LSSNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 209 ~l~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
.+..++|+|+|++ +++++++++++.++++.|.+++++.+||+|++
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--------------------------------- 65 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKN--------------------------------- 65 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSS---------------------------------
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC---------------------------------
Confidence 4668899999998 99999999999999999999999999999874
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhh
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKI 366 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~ 366 (482)
.++++|+|+.+|+...+....
T Consensus 66 ---------~~~lvGivt~~dl~~~~~~~~-------------------------------------------------- 86 (148)
T 3lv9_A 66 ---------KDDILGFVHIRDLYNQKINEN-------------------------------------------------- 86 (148)
T ss_dssp ---------TTSEEEEEEHHHHHHHHHHHS--------------------------------------------------
T ss_pred ---------CCcEEEEEEHHHHHHHHhcCC--------------------------------------------------
Confidence 158999999999987664320
Q ss_pred hccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC
Q psy15912 367 YKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN 446 (482)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~ 446 (482)
..+++++| ++++++++++++.+++++|.+.+.+++||+|+
T Consensus 87 ---------------------------------------~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 126 (148)
T 3lv9_A 87 ---------------------------------------KIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE 126 (148)
T ss_dssp ---------------------------------------CCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred ---------------------------------------CccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC
Confidence 12688999 88999999999999999999999999999998
Q ss_pred CCeEEEEEeHHHhHHHHH
Q psy15912 447 NNHVVGMITRKDLARYRV 464 (482)
Q Consensus 447 ~g~lvGIITr~DLl~~~~ 464 (482)
+|+++|+||++|++++..
T Consensus 127 ~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 127 YGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp TSSEEEEEEHHHHHHHHH
T ss_pred CCCEEEEEEHHHHHHHHh
Confidence 899999999999998754
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.76 E-value=5.6e-18 Score=165.26 Aligned_cols=182 Identities=23% Similarity=0.390 Sum_probs=139.8
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
..+++|+|.++++++.+++++.++++.|.+++++.+||+|++
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-------------------------------------- 124 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDE-------------------------------------- 124 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTT--------------------------------------
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCC--------------------------------------
Confidence 458999999999999999999999999999999999999875
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHhhhhcc-----C------CCCCCccchh---hhhhhccccccccCCCCccccchhhHH
Q psy15912 292 RKESPGRLVGLILRSQLIILIKHKIYKE-----N------QNWPDDQLSS---EIFHAEYRCRPRIWSPGRLVGLILRSQ 357 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~~~~~~-----~------~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~G~i~~~~ 357 (482)
++++|+++.+|+.+.+....... . ...+++.+.. .+.....++.|++ ++|.++|+++.+|
T Consensus 125 -----~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~d 198 (280)
T 3kh5_A 125 -----NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTD 198 (280)
T ss_dssp -----CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHH
T ss_pred -----CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHH
Confidence 69999999999998876442111 0 0122222221 2345566778888 7899999999999
Q ss_pred HHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcC
Q psy15912 358 LIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALG 437 (482)
Q Consensus 358 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~ 437 (482)
+.+.+......+. +.. . ........+++++|+++++++++++++.+|.+.|.+.+
T Consensus 199 l~~~~~~~~~~~~------------~~~--~-----------~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~ 253 (280)
T 3kh5_A 199 FIKLLGSDWAFNH------------MQT--G-----------NVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTND 253 (280)
T ss_dssp HHHHHTSHHHHHH------------HHS--C-----------CTHHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHT
T ss_pred HHHHHhhhhhhhh------------hcc--c-----------chhhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCC
Confidence 9887743211100 000 0 00001224789999999999999999999999999999
Q ss_pred CCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 438 LRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 438 lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
.+++||+|++|+++|+||++|++++
T Consensus 254 ~~~l~Vvd~~g~~~Givt~~dil~~ 278 (280)
T 3kh5_A 254 IGALPVVDENLRIKGIITEKDVLKY 278 (280)
T ss_dssp CCEEEEECTTCBEEEEEEHHHHGGG
T ss_pred CCEEEEECCCCeEEEEEeHHHHHHh
Confidence 9999999998999999999999975
No 9
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.76 E-value=1.2e-17 Score=145.16 Aligned_cols=126 Identities=20% Similarity=0.337 Sum_probs=111.0
Q ss_pred cccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCC
Q psy15912 211 SNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDA 290 (482)
Q Consensus 211 ~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (482)
..++++|+|.+++.++++++++.++++.|.+++++.+||+| +
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~------------------------------------- 43 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G------------------------------------- 43 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T-------------------------------------
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-------------------------------------
Confidence 46799999999999999999999999999999999999999 5
Q ss_pred CCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccC
Q psy15912 291 SRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKEN 370 (482)
Q Consensus 291 ~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~ 370 (482)
++++|+|+.+|+...+....
T Consensus 44 ------~~~~Givt~~dl~~~~~~~~------------------------------------------------------ 63 (133)
T 2ef7_A 44 ------NKPVGIITERDIVKAIGKGK------------------------------------------------------ 63 (133)
T ss_dssp ------TEEEEEEEHHHHHHHHHTTC------------------------------------------------------
T ss_pred ------CEEEEEEcHHHHHHHHhcCC------------------------------------------------------
Confidence 59999999999977654320
Q ss_pred CCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeE
Q psy15912 371 QNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHV 450 (482)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~l 450 (482)
....+++++|++++.++++++++.++.+.|.+.+.+++||+|++|++
T Consensus 64 ---------------------------------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~ 110 (133)
T 2ef7_A 64 ---------------------------------SLETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNL 110 (133)
T ss_dssp ---------------------------------CTTCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCE
T ss_pred ---------------------------------CcccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeE
Confidence 00127899999999999999999999999999999999999989999
Q ss_pred EEEEeHHHhHHHHHhhc
Q psy15912 451 VGMITRKDLARYRVWRH 467 (482)
Q Consensus 451 vGIITr~DLl~~~~~~~ 467 (482)
+|+||++|++++.....
T Consensus 111 ~Giit~~dll~~~~~~~ 127 (133)
T 2ef7_A 111 KGIISIRDITRAIDDMF 127 (133)
T ss_dssp EEEEEHHHHHHHHHHHC
T ss_pred EEEEEHHHHHHHHHHHH
Confidence 99999999998865443
No 10
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.76 E-value=1.8e-18 Score=170.97 Aligned_cols=184 Identities=15% Similarity=0.210 Sum_probs=143.6
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
..+++|+|+++++++.+++++.++++.|.+++++.+||+|++
T Consensus 92 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-------------------------------------- 133 (296)
T 3ddj_A 92 TTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN-------------------------------------- 133 (296)
T ss_dssp TSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTT--------------------------------------
T ss_pred cccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC--------------------------------------
Confidence 468999999999999999999999999999999999999875
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHhhhhc----c------CCCCCCccchh---hhhhhccccccccCCCCccccchhhHHH
Q psy15912 292 RKESPGRLVGLILRSQLIILIKHKIYK----E------NQNWPDDQLSS---EIFHAEYRCRPRIWSPGRLVGLILRSQL 358 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~~~~~----~------~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~G~i~~~~l 358 (482)
++++|+++.+|+...+...... + ....+++.+.. .+.....++.|++++++.++|+++.+|+
T Consensus 134 -----~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl 208 (296)
T 3ddj_A 134 -----DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNA 208 (296)
T ss_dssp -----SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred -----CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHH
Confidence 6899999999998755432110 0 01123333322 3345566788999989999999999999
Q ss_pred HHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCC
Q psy15912 359 IILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGL 438 (482)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~l 438 (482)
.+.+....... . . ......+++++|+++++++++++++.+|.++|.+.+.
T Consensus 209 ~~~~~~~~~~~-~--------~---------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~ 258 (296)
T 3ddj_A 209 IKQLAKAVDKL-D--------P---------------------DYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRI 258 (296)
T ss_dssp HHHHHHHHHHT-C--------T---------------------HHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhc-C--------h---------------------hhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCC
Confidence 88775321110 0 0 0012237899999999999999999999999999999
Q ss_pred CEEEEECCCCeEEEEEeHHHhHHHHHhhcc
Q psy15912 439 RHVVVVNNNNHVVGMITRKDLARYRVWRHG 468 (482)
Q Consensus 439 r~lpVVD~~g~lvGIITr~DLl~~~~~~~~ 468 (482)
+++||+|++|+++||||++|++++......
T Consensus 259 ~~l~Vvd~~g~~~Giit~~Dil~~l~~~~~ 288 (296)
T 3ddj_A 259 GSLLILNKDNTIRGIITERDLLIALHHILV 288 (296)
T ss_dssp SEEEEECTTSCEEEEEEHHHHHHHHHHHHH
T ss_pred CEEEEECCCCeEEEEEcHHHHHHHHHHHhc
Confidence 999999989999999999999998765443
No 11
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.76 E-value=4.6e-18 Score=148.11 Aligned_cols=124 Identities=12% Similarity=0.135 Sum_probs=106.2
Q ss_pred ccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 212 NITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 212 ~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
.++|+|+|++ +++++++++++.++++.|++++++.+||++++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~------------------------------------ 44 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDS------------------------------------ 44 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSS------------------------------------
T ss_pred CcCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCC------------------------------------
Confidence 3689999974 78999999999999999999999999999764
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
+++++|+|+.+|+.+++....
T Consensus 45 ------~~~lvGivt~~dl~~~~~~~~----------------------------------------------------- 65 (130)
T 3hf7_A 45 ------LDDAISMLRVREAYRLMTEKK----------------------------------------------------- 65 (130)
T ss_dssp ------GGGEEEEEEHHHHHHHHTSSS-----------------------------------------------------
T ss_pred ------CCcEEEEEEHHHHHHHHhccC-----------------------------------------------------
Confidence 268999999999987654320
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCe
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNH 449 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~ 449 (482)
.....+++++| ++|+++++++++.++.++|.+.+.+++||+|++|+
T Consensus 66 ---------------------------------~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~ 111 (130)
T 3hf7_A 66 ---------------------------------EFTKEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGD 111 (130)
T ss_dssp ---------------------------------CCCHHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSC
T ss_pred ---------------------------------ccchhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 00112678889 67889999999999999999999999999999999
Q ss_pred EEEEEeHHHhHHHHH
Q psy15912 450 VVGMITRKDLARYRV 464 (482)
Q Consensus 450 lvGIITr~DLl~~~~ 464 (482)
++||||++|+++...
T Consensus 112 lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 112 IQGLVTVEDILEEIV 126 (130)
T ss_dssp EEEEEEHHHHHHHHH
T ss_pred EEEEeeHHHHHHHHh
Confidence 999999999998754
No 12
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.76 E-value=4.7e-18 Score=147.68 Aligned_cols=124 Identities=20% Similarity=0.286 Sum_probs=104.8
Q ss_pred ccccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCC
Q psy15912 210 SSNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHK 287 (482)
Q Consensus 210 l~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (482)
+..++|+|+|++ +++++++++++.++++.|.+++++.+||+|++
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~---------------------------------- 48 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQ---------------------------------- 48 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSS----------------------------------
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC----------------------------------
Confidence 567899999994 57799999999999999999999999999874
Q ss_pred CCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhh
Q psy15912 288 GDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIY 367 (482)
Q Consensus 288 ~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~ 367 (482)
.++++|+|+.+|+...+....
T Consensus 49 --------~~~~~Givt~~dl~~~~~~~~--------------------------------------------------- 69 (130)
T 3i8n_A 49 --------KDNIIGFVHRLELFKMQQSGS--------------------------------------------------- 69 (130)
T ss_dssp --------TTCEEEECCHHHHHHHHHTTT---------------------------------------------------
T ss_pred --------CCcEEEEEEHHHHHHHHhcCC---------------------------------------------------
Confidence 268999999999987654320
Q ss_pred ccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCC
Q psy15912 368 KENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN 447 (482)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~ 447 (482)
...+++++|. +++++++++++.++++.|.+.+.+++||+|++
T Consensus 70 -------------------------------------~~~~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~ 111 (130)
T 3i8n_A 70 -------------------------------------GQKQLGAVMR-PIQVVLNNTALPKVFDQMMTHRLQLALVVDEY 111 (130)
T ss_dssp -------------------------------------TTSBHHHHSE-ECCEEETTSCHHHHHHHHHHHTCCEEEEECTT
T ss_pred -------------------------------------CcCCHHHHhc-CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCC
Confidence 0126888994 58899999999999999999999999999999
Q ss_pred CeEEEEEeHHHhHHHHH
Q psy15912 448 NHVVGMITRKDLARYRV 464 (482)
Q Consensus 448 g~lvGIITr~DLl~~~~ 464 (482)
|+++|+||++|++++..
T Consensus 112 g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 112 GTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp SCEEEEEEHHHHHHHHH
T ss_pred CCEEEEEEHHHHHHHHc
Confidence 99999999999998753
No 13
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.75 E-value=9.1e-18 Score=143.50 Aligned_cols=119 Identities=21% Similarity=0.315 Sum_probs=107.9
Q ss_pred cchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCC
Q psy15912 213 ITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASR 292 (482)
Q Consensus 213 l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (482)
.+++|+|.+++.++.+++++.++++.|.+++++.+||+|++
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--------------------------------------- 41 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEH--------------------------------------- 41 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTT---------------------------------------
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC---------------------------------------
Confidence 37899999999999999999999999999999999999975
Q ss_pred CCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCC
Q psy15912 293 KESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQN 372 (482)
Q Consensus 293 ~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~ 372 (482)
++++|+|+.+|+...+....
T Consensus 42 ----~~~~G~vt~~dl~~~~~~~~-------------------------------------------------------- 61 (122)
T 3kpb_A 42 ----GKLVGIITSWDIAKALAQNK-------------------------------------------------------- 61 (122)
T ss_dssp ----SBEEEEECHHHHHHHHHTTC--------------------------------------------------------
T ss_pred ----CCEEEEEEHHHHHHHHHhcc--------------------------------------------------------
Confidence 69999999999987654320
Q ss_pred CCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEE
Q psy15912 373 WPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVG 452 (482)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvG 452 (482)
.+++++|+++++++++++++.++++.|.+.+.+++||+|++|+++|
T Consensus 62 ----------------------------------~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~G 107 (122)
T 3kpb_A 62 ----------------------------------KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVG 107 (122)
T ss_dssp ----------------------------------CBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEE
T ss_pred ----------------------------------cCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEE
Confidence 1688999999999999999999999999999999999998899999
Q ss_pred EEeHHHhHHHHH
Q psy15912 453 MITRKDLARYRV 464 (482)
Q Consensus 453 IITr~DLl~~~~ 464 (482)
+||++|++++..
T Consensus 108 ivt~~dl~~~l~ 119 (122)
T 3kpb_A 108 IVTSEDISRLFG 119 (122)
T ss_dssp EEEHHHHHHHHC
T ss_pred EEeHHHHHHHhh
Confidence 999999998753
No 14
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.75 E-value=1.3e-17 Score=152.31 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=107.6
Q ss_pred Cccccchhhccc--CCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 209 LSSNITARIVKS--HPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 209 ~l~~l~a~dvM~--~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
.+..++|+|+|+ ++++++++++++.++++.|.+++++.+||+|++
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~--------------------------------- 84 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNN--------------------------------- 84 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSS---------------------------------
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC---------------------------------
Confidence 366789999999 789999999999999999999999999999874
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhh
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKI 366 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~ 366 (482)
.++++|+|+.+|+...+...
T Consensus 85 ---------~~~lvGivt~~dl~~~~~~~--------------------------------------------------- 104 (172)
T 3lhh_A 85 ---------VDDMVGIISAKQLLSESIAG--------------------------------------------------- 104 (172)
T ss_dssp ---------TTSEEEEEEHHHHHHHHHTT---------------------------------------------------
T ss_pred ---------CCeEEEEEEHHHHHHHHhhc---------------------------------------------------
Confidence 15899999999998765432
Q ss_pred hccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC
Q psy15912 367 YKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN 446 (482)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~ 446 (482)
...+++++| ++++++++++++.+++++|.+.+.+++||+|+
T Consensus 105 --------------------------------------~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 145 (172)
T 3lhh_A 105 --------------------------------------ERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE 145 (172)
T ss_dssp --------------------------------------CCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred --------------------------------------CcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 012789999 99999999999999999999999999999998
Q ss_pred CCeEEEEEeHHHhHHHHHh
Q psy15912 447 NNHVVGMITRKDLARYRVW 465 (482)
Q Consensus 447 ~g~lvGIITr~DLl~~~~~ 465 (482)
+|+++||||++|++++...
T Consensus 146 ~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 146 YGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp TSCEEEEEEHHHHHHHHHT
T ss_pred CCCEEEEeeHHHHHHHHhC
Confidence 8999999999999998653
No 15
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.75 E-value=4.3e-18 Score=152.24 Aligned_cols=124 Identities=17% Similarity=0.247 Sum_probs=109.7
Q ss_pred ccccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEe-cCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 210 SSNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIV-DVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 210 l~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVV-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
+..++|+|+|++ +++++++++++.++++.|.+++++.+||+ |++
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~--------------------------------- 63 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADND--------------------------------- 63 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTE---------------------------------
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCC---------------------------------
Confidence 446799999996 89999999999999999999999999999 543
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhh
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKI 366 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~ 366 (482)
+++++|+|+.+|+...+....
T Consensus 64 ---------~~~lvGivt~~dl~~~~~~~~-------------------------------------------------- 84 (153)
T 3oco_A 64 ---------KDKIIGYAYNYDIVRQARIDD-------------------------------------------------- 84 (153)
T ss_dssp ---------EEEEEEEEEHHHHHHHHHHHT--------------------------------------------------
T ss_pred ---------CCcEEEEEEHHHHHhHHhcCC--------------------------------------------------
Confidence 269999999999987764420
Q ss_pred hccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC
Q psy15912 367 YKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN 446 (482)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~ 446 (482)
..+++++| ++++++++++++.+++++|.+.+.+++||+|+
T Consensus 85 ---------------------------------------~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 124 (153)
T 3oco_A 85 ---------------------------------------KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE 124 (153)
T ss_dssp ---------------------------------------TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT
T ss_pred ---------------------------------------CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 12789999 89999999999999999999999999999998
Q ss_pred CCeEEEEEeHHHhHHHHHh
Q psy15912 447 NNHVVGMITRKDLARYRVW 465 (482)
Q Consensus 447 ~g~lvGIITr~DLl~~~~~ 465 (482)
+|+++||||++|++++...
T Consensus 125 ~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 125 YGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp TSCEEEEECHHHHHHHHHC
T ss_pred CCCEEEEeeHHHHHHHHhc
Confidence 9999999999999998654
No 16
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.74 E-value=2e-17 Score=145.48 Aligned_cols=122 Identities=18% Similarity=0.262 Sum_probs=107.7
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
.++++|+|.+++.++++++++.++++.|.+++++.+||+|++
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-------------------------------------- 45 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARD-------------------------------------- 45 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETT--------------------------------------
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCC--------------------------------------
Confidence 478999999999999999999999999999999999999975
Q ss_pred CCCCCC--eEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 292 RKESPG--RLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 292 ~~~~~g--~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
+ +++|+|+.+|+.+.+.+..
T Consensus 46 -----~~~~~~Givt~~dl~~~~~~~~----------------------------------------------------- 67 (141)
T 2rih_A 46 -----NPKRPVAVVSERDILRAVAQRL----------------------------------------------------- 67 (141)
T ss_dssp -----EEEEEEEEEEHHHHHHHHHTTC-----------------------------------------------------
T ss_pred -----CcceeEEEEEHHHHHHHHhcCC-----------------------------------------------------
Confidence 6 8999999999987654320
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCe
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNH 449 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~ 449 (482)
....+++++|.+++++++++ ++.+++++|.+.+.+++||+|++|+
T Consensus 68 ----------------------------------~~~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~ 112 (141)
T 2rih_A 68 ----------------------------------DLDGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGE 112 (141)
T ss_dssp ----------------------------------CTTSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred ----------------------------------CCCCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCc
Confidence 00127899999999999999 9999999999999999999998999
Q ss_pred EEEEEeHHHhHHHHH
Q psy15912 450 VVGMITRKDLARYRV 464 (482)
Q Consensus 450 lvGIITr~DLl~~~~ 464 (482)
++|+||++|++++..
T Consensus 113 ~~Giit~~dll~~~~ 127 (141)
T 2rih_A 113 LVGVLSIRDLCFERA 127 (141)
T ss_dssp EEEEEEHHHHHSCHH
T ss_pred EEEEEEHHHHHHHHH
Confidence 999999999987643
No 17
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.74 E-value=4.2e-18 Score=149.40 Aligned_cols=123 Identities=18% Similarity=0.322 Sum_probs=105.2
Q ss_pred ccchhhccc--CCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 212 NITARIVKS--HPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 212 ~l~a~dvM~--~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
.++|+|+|+ +++.++.++.++.++++.|.+++++.+||+|++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~------------------------------------ 45 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGES------------------------------------ 45 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS------------------------------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCC------------------------------------
Confidence 478999999 678999999999999999999999999999874
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
.++++|+|+.+|+.+.+....
T Consensus 46 ------~~~~vGivt~~dl~~~~~~~~----------------------------------------------------- 66 (136)
T 3lfr_A 46 ------HDDVLGVLLAKDLLPLILKAD----------------------------------------------------- 66 (136)
T ss_dssp ------TTCEEEEEEGGGGGGGGGSSS-----------------------------------------------------
T ss_pred ------CCcEEEEEEHHHHHHHHHhcc-----------------------------------------------------
Confidence 258999999999865432110
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCe
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNH 449 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~ 449 (482)
....+++++|++ ++++++++++.+++++|.+.+.+++||+|++|+
T Consensus 67 ----------------------------------~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~ 111 (136)
T 3lfr_A 67 ----------------------------------GDSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGG 111 (136)
T ss_dssp ----------------------------------GGGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSC
T ss_pred ----------------------------------CCCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 012378899976 899999999999999999999999999999999
Q ss_pred EEEEEeHHHhHHHHH
Q psy15912 450 VVGMITRKDLARYRV 464 (482)
Q Consensus 450 lvGIITr~DLl~~~~ 464 (482)
++||||++|+++...
T Consensus 112 lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 112 VAGLVTIEDVLEQIV 126 (136)
T ss_dssp EEEEEEHHHHHTTC-
T ss_pred EEEEEEHHHHHHHHh
Confidence 999999999998754
No 18
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.74 E-value=4.2e-18 Score=147.38 Aligned_cols=121 Identities=19% Similarity=0.402 Sum_probs=103.6
Q ss_pred ccchhhcccCC--eeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 212 NITARIVKSHP--VICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 212 ~l~a~dvM~~~--~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
.++|+|+|+++ +.++++++++.++++.|.+++++.+||+|++
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~------------------------------------ 45 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISED------------------------------------ 45 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS------------------------------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCC------------------------------------
Confidence 47899999954 9999999999999999999999999999874
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
.++++|+|+.+|+.+.+...
T Consensus 46 ------~~~~vGivt~~dl~~~~~~~------------------------------------------------------ 65 (127)
T 3nqr_A 46 ------KDHIEGILMAKDLLPFMRSD------------------------------------------------------ 65 (127)
T ss_dssp ------TTCEEEEEEGGGGGGGGSTT------------------------------------------------------
T ss_pred ------CCcEEEEEEHHHHHHHHhcc------------------------------------------------------
Confidence 25899999999986543211
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCe
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNH 449 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~ 449 (482)
....+++++|.+ ++++++++++.++++.|.+.+.+++||+|++|+
T Consensus 66 ----------------------------------~~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 110 (127)
T 3nqr_A 66 ----------------------------------AEAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGG 110 (127)
T ss_dssp ----------------------------------CCCCCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred ----------------------------------CCCCCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 011268889965 789999999999999999999999999999999
Q ss_pred EEEEEeHHHhHHHH
Q psy15912 450 VVGMITRKDLARYR 463 (482)
Q Consensus 450 lvGIITr~DLl~~~ 463 (482)
++||||++|++++.
T Consensus 111 ~~Giit~~dll~~l 124 (127)
T 3nqr_A 111 VSGLVTIEDILELI 124 (127)
T ss_dssp EEEEEEHHHHHHHC
T ss_pred EEEEEEHHHHHHHH
Confidence 99999999999864
No 19
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.73 E-value=1e-17 Score=145.40 Aligned_cols=121 Identities=15% Similarity=0.303 Sum_probs=103.7
Q ss_pred cccchhhccc--CCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCC
Q psy15912 211 SNITARIVKS--HPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKG 288 (482)
Q Consensus 211 ~~l~a~dvM~--~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (482)
..++|+|+|+ ++++++++++++.++++.|.+++++.+||+|++
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~----------------------------------- 47 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDD----------------------------------- 47 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSS-----------------------------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCC-----------------------------------
Confidence 3678999999 688999999999999999999999999999874
Q ss_pred CCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhc
Q psy15912 289 DASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYK 368 (482)
Q Consensus 289 ~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~ 368 (482)
.++++|+|+.+|+.+.+..
T Consensus 48 -------~~~~~Givt~~dl~~~~~~------------------------------------------------------ 66 (129)
T 3jtf_A 48 -------RDNIIGILLAKDLLRYMLE------------------------------------------------------ 66 (129)
T ss_dssp -------TTCEEEEEEGGGGGGGGTC------------------------------------------------------
T ss_pred -------CCcEEEEEEHHHHHhHhcc------------------------------------------------------
Confidence 2589999999997543211
Q ss_pred cCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCC
Q psy15912 369 ENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNN 448 (482)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g 448 (482)
...+++++|.+ ++++++++++.+++++|.+.+.+++||+|++|
T Consensus 67 ------------------------------------~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g 109 (129)
T 3jtf_A 67 ------------------------------------PALDIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHG 109 (129)
T ss_dssp ------------------------------------TTSCGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-C
T ss_pred ------------------------------------CCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCC
Confidence 01267888865 88999999999999999999999999999889
Q ss_pred eEEEEEeHHHhHHHHH
Q psy15912 449 HVVGMITRKDLARYRV 464 (482)
Q Consensus 449 ~lvGIITr~DLl~~~~ 464 (482)
+++|+||++|++++..
T Consensus 110 ~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 110 GISGLVTMEDVLEQIV 125 (129)
T ss_dssp CEEEEEEHHHHHHHHH
T ss_pred CEEEEEEHHHHHHHHh
Confidence 9999999999998754
No 20
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.73 E-value=2.9e-17 Score=143.59 Aligned_cols=127 Identities=14% Similarity=0.309 Sum_probs=109.4
Q ss_pred ccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 210 SSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 210 l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
+..++++|+|.+++.++++++++.++++.|.+++++.+||+|++
T Consensus 4 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~------------------------------------ 47 (138)
T 2yzi_A 4 DMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDD------------------------------------ 47 (138)
T ss_dssp CTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT------------------------------------
T ss_pred hhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC------------------------------------
Confidence 56789999999999999999999999999999999999999965
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
++++|+|+.+|+.+.+....
T Consensus 48 -------~~~~Givt~~dl~~~~~~~~----------------------------------------------------- 67 (138)
T 2yzi_A 48 -------GNVVGFFTKSDIIRRVIVPG----------------------------------------------------- 67 (138)
T ss_dssp -------SCEEEEEEHHHHHHHTTTTC-----------------------------------------------------
T ss_pred -------CcEEEEEeHHHHHHHHHhcC-----------------------------------------------------
Confidence 68999999999863321110
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCe
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNH 449 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~ 449 (482)
.....+++++|+++++++++++++.++.++|.+.+.+++ |+|++|+
T Consensus 68 ---------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~ 113 (138)
T 2yzi_A 68 ---------------------------------LPYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGK 113 (138)
T ss_dssp ---------------------------------CCTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTE
T ss_pred ---------------------------------CcccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCC
Confidence 001127899999999999999999999999999999999 9998999
Q ss_pred EEEEEeHHHhHHHHHhh
Q psy15912 450 VVGMITRKDLARYRVWR 466 (482)
Q Consensus 450 lvGIITr~DLl~~~~~~ 466 (482)
++|+||++|++++....
T Consensus 114 ~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 114 IVGIFTLSDLLEASRRR 130 (138)
T ss_dssp EEEEEEHHHHHHHHHCC
T ss_pred EEEEEEHHHHHHHHHHH
Confidence 99999999999886543
No 21
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.73 E-value=1.2e-17 Score=144.62 Aligned_cols=123 Identities=15% Similarity=0.122 Sum_probs=107.9
Q ss_pred cccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCC
Q psy15912 211 SNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDA 290 (482)
Q Consensus 211 ~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (482)
..++++|+|.+++.++.+++++.++++.|++++++.+||+|+
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------------------------------- 44 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-------------------------------------- 44 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET--------------------------------------
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC--------------------------------------
Confidence 368999999999999999999999999999999999999986
Q ss_pred CCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccC
Q psy15912 291 SRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKEN 370 (482)
Q Consensus 291 ~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~ 370 (482)
++++|+|+.+|+.+.+....
T Consensus 45 ------~~~~Givt~~dl~~~~~~~~------------------------------------------------------ 64 (128)
T 3gby_A 45 ------ERYLGMVHLSRLLEGRKGWP------------------------------------------------------ 64 (128)
T ss_dssp ------TEEEEEEEHHHHHTTCSSSC------------------------------------------------------
T ss_pred ------CEEEEEEEHHHHHHHHhhCC------------------------------------------------------
Confidence 38999999999864322110
Q ss_pred CCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeE
Q psy15912 371 QNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHV 450 (482)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~l 450 (482)
....+++++|++++.++++++++.++++.|.+.+.+++||+|++|++
T Consensus 65 ---------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~ 111 (128)
T 3gby_A 65 ---------------------------------TVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRY 111 (128)
T ss_dssp ---------------------------------CTTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBE
T ss_pred ---------------------------------cccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCE
Confidence 01126899999999999999999999999999999999999999999
Q ss_pred EEEEeHHHhHHHHH
Q psy15912 451 VGMITRKDLARYRV 464 (482)
Q Consensus 451 vGIITr~DLl~~~~ 464 (482)
+|+||++|++++..
T Consensus 112 ~Giit~~dll~~l~ 125 (128)
T 3gby_A 112 EGVVSRKRILGFLA 125 (128)
T ss_dssp EEEEEHHHHHHHHH
T ss_pred EEEEEHHHHHHHHH
Confidence 99999999998754
No 22
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.73 E-value=2.2e-17 Score=144.16 Aligned_cols=126 Identities=21% Similarity=0.383 Sum_probs=108.9
Q ss_pred CccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCC
Q psy15912 209 LSSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKG 288 (482)
Q Consensus 209 ~l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (482)
.+..++++|+|.+++.++.+++++.++++.|.+++++.+||+|++
T Consensus 4 ~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------------------- 48 (138)
T 2p9m_A 4 TLKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDE----------------------------------- 48 (138)
T ss_dssp -CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTT-----------------------------------
T ss_pred ccccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCC-----------------------------------
Confidence 456789999999999999999999999999999999999999875
Q ss_pred CCCCCCCCCeEEEEEeHHHH-HHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhh
Q psy15912 289 DASRKESPGRLVGLILRSQL-IILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIY 367 (482)
Q Consensus 289 ~~~~~~~~g~lvGiIs~~dL-~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~ 367 (482)
++++|+++.+|+ ...+....
T Consensus 49 --------~~~~Givt~~dl~~~~~~~~~--------------------------------------------------- 69 (138)
T 2p9m_A 49 --------NKVIGIVTTTDIGYNLIRDKY--------------------------------------------------- 69 (138)
T ss_dssp --------CBEEEEEEHHHHHHHHTTTCC---------------------------------------------------
T ss_pred --------CeEEEEEEHHHHHHHHHhhcc---------------------------------------------------
Confidence 689999999998 65432210
Q ss_pred ccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcC-----CCEEE
Q psy15912 368 KENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALG-----LRHVV 442 (482)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~-----lr~lp 442 (482)
....+++++|++++.++++++++.++.+.|.+.+ .+++|
T Consensus 70 ------------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~ 113 (138)
T 2p9m_A 70 ------------------------------------TLETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLP 113 (138)
T ss_dssp ------------------------------------CSSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEE
T ss_pred ------------------------------------cCCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEE
Confidence 0112788999999999999999999999999999 99999
Q ss_pred EECCCCeEEEEEeHHHhHHHHH
Q psy15912 443 VVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 443 VVD~~g~lvGIITr~DLl~~~~ 464 (482)
|+|++|+++|+||++|++++..
T Consensus 114 Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 114 VVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp EECTTSBEEEEEEHHHHHHHHH
T ss_pred EECCCCeEEEEEEHHHHHHHHH
Confidence 9998999999999999998754
No 23
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.73 E-value=1.1e-17 Score=148.89 Aligned_cols=119 Identities=13% Similarity=0.206 Sum_probs=105.3
Q ss_pred cchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCC
Q psy15912 213 ITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDA 290 (482)
Q Consensus 213 l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (482)
++|+|+|.+ ++.++.+++++.++++.|.+++++.+||+|++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~------------------------------------- 70 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDD------------------------------------- 70 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT-------------------------------------
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC-------------------------------------
Confidence 599999999 99999999999999999999999999999975
Q ss_pred CCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccC
Q psy15912 291 SRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKEN 370 (482)
Q Consensus 291 ~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~ 370 (482)
++++|+|+.+|+.+.+....
T Consensus 71 ------~~~~Givt~~dl~~~~~~~~------------------------------------------------------ 90 (149)
T 3k2v_A 71 ------MNIIGIFTDGDLRRVFDTGV------------------------------------------------------ 90 (149)
T ss_dssp ------CBEEEEEEHHHHHHHHCSSS------------------------------------------------------
T ss_pred ------CcEEEEecHHHHHHHHhcCC------------------------------------------------------
Confidence 69999999999987654320
Q ss_pred CCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeE
Q psy15912 371 QNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHV 450 (482)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~l 450 (482)
.....+++++|+++++++++++++.++++.|.+.+.+++||+|++ ++
T Consensus 91 --------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~ 137 (149)
T 3k2v_A 91 --------------------------------DMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HL 137 (149)
T ss_dssp --------------------------------CCTTCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EE
T ss_pred --------------------------------CcccCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EE
Confidence 001237899999999999999999999999999999999999865 99
Q ss_pred EEEEeHHHhHH
Q psy15912 451 VGMITRKDLAR 461 (482)
Q Consensus 451 vGIITr~DLl~ 461 (482)
+|+||++|+++
T Consensus 138 ~Giit~~dil~ 148 (149)
T 3k2v_A 138 LGVVHMHDLLR 148 (149)
T ss_dssp EEEEEHHHHTC
T ss_pred EEEEEHHHhhc
Confidence 99999999985
No 24
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.73 E-value=3.3e-17 Score=147.76 Aligned_cols=126 Identities=16% Similarity=0.133 Sum_probs=105.7
Q ss_pred chhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 214 TARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 214 ~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
+++++|++ +++++.+++++.+++++|.+++++.+||+|++
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~-------------------------------------- 57 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-------------------------------------- 57 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC---------------------------------------
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC--------------------------------------
Confidence 67899984 89999999999999999999999999999875
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCC
Q psy15912 292 RKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQ 371 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~ 371 (482)
++++|+|+.+|+.+++.....
T Consensus 58 -----~~lvGiit~~Di~~~~~~~~~------------------------------------------------------ 78 (156)
T 3k6e_A 58 -----KQFVGTIGLRDIMAYQMEHDL------------------------------------------------------ 78 (156)
T ss_dssp -----CBEEEEEEHHHHHHHHHHHTC------------------------------------------------------
T ss_pred -----CcEEEEEEecchhhhhhhccc------------------------------------------------------
Confidence 689999999999877654310
Q ss_pred CCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEE
Q psy15912 372 NWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVV 451 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lv 451 (482)
... .....+++++|+++++++++++++.+|.++|.+.+ .+||||++|+++
T Consensus 79 -------~~~---------------------~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~ 128 (156)
T 3k6e_A 79 -------SQE---------------------IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQ 128 (156)
T ss_dssp -------CHH---------------------HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEE
T ss_pred -------ccc---------------------cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEE
Confidence 000 00123799999999999999999999999998764 599999999999
Q ss_pred EEEeHHHhHHHHHhh
Q psy15912 452 GMITRKDLARYRVWR 466 (482)
Q Consensus 452 GIITr~DLl~~~~~~ 466 (482)
||||++|++++..+.
T Consensus 129 GiiT~~Dil~~~~~~ 143 (156)
T 3k6e_A 129 GIITRKSILKAVNAL 143 (156)
T ss_dssp EEEEHHHHHHHHHHH
T ss_pred EEEEHHHHHHHHHHH
Confidence 999999999986543
No 25
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=3.9e-17 Score=147.87 Aligned_cols=133 Identities=16% Similarity=0.259 Sum_probs=115.1
Q ss_pred CCCCCccccchhhcccC---CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccc
Q psy15912 205 DPPPLSSNITARIVKSH---PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHK 281 (482)
Q Consensus 205 ~~~~~l~~l~a~dvM~~---~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (482)
+....+..++|+|+|.+ ++.++.+++++.++++.|.+++++.+||+|++
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~---------------------------- 67 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD---------------------------- 67 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT----------------------------
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC----------------------------
Confidence 34567889999999995 79999999999999999999999999999975
Q ss_pred cCCCCCCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHH
Q psy15912 282 RDSSHKGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIIL 361 (482)
Q Consensus 282 ~~~~~~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~ 361 (482)
++++|+|+.+|+.+.+.....
T Consensus 68 ---------------~~~~Givt~~dl~~~~~~~~~-------------------------------------------- 88 (165)
T 3fhm_A 68 ---------------GVVLGIFTERDLVKAVAGQGA-------------------------------------------- 88 (165)
T ss_dssp ---------------SCEEEEEEHHHHHHHHHHHGG--------------------------------------------
T ss_pred ---------------CeEEEEEEHHHHHHHHHhcCC--------------------------------------------
Confidence 699999999999887654310
Q ss_pred HHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEE
Q psy15912 362 IKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHV 441 (482)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~l 441 (482)
.....+++++|.++++++++++++.+++++|.+.+.+++
T Consensus 89 -----------------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l 127 (165)
T 3fhm_A 89 -----------------------------------------ASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHV 127 (165)
T ss_dssp -----------------------------------------GGGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEE
T ss_pred -----------------------------------------ccccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEE
Confidence 001137899999999999999999999999999999999
Q ss_pred EEECCCCeEEEEEeHHHhHHHHHhh
Q psy15912 442 VVVNNNNHVVGMITRKDLARYRVWR 466 (482)
Q Consensus 442 pVVD~~g~lvGIITr~DLl~~~~~~ 466 (482)
||+|+ |+++|+||++|++++....
T Consensus 128 pVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 128 PVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp EEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred EEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 99997 9999999999999886433
No 26
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.72 E-value=4.5e-17 Score=139.60 Aligned_cols=121 Identities=13% Similarity=0.193 Sum_probs=106.1
Q ss_pred cchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCC
Q psy15912 213 ITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASR 292 (482)
Q Consensus 213 l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (482)
++++|+|.+++.++++++++.++++.|.+.+++.+||+| +
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~--------------------------------------- 40 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-E--------------------------------------- 40 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T---------------------------------------
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-C---------------------------------------
Confidence 478999999999999999999999999999999999999 5
Q ss_pred CCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCC
Q psy15912 293 KESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQN 372 (482)
Q Consensus 293 ~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~ 372 (482)
++++|+|+.+|+.+.+....
T Consensus 41 ----~~~~G~it~~dl~~~~~~~~-------------------------------------------------------- 60 (125)
T 1pbj_A 41 ----GVRVGIVTTWDVLEAIAEGD-------------------------------------------------------- 60 (125)
T ss_dssp ----TEEEEEEEHHHHHHHHHHTC--------------------------------------------------------
T ss_pred ----CeeEEEEeHHHHHHHHhcCC--------------------------------------------------------
Confidence 59999999999987654320
Q ss_pred CCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEE
Q psy15912 373 WPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVG 452 (482)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvG 452 (482)
.....+++++|++++.++++++++.++.+.|.+.+.+++||+|+ |+++|
T Consensus 61 ------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~G 109 (125)
T 1pbj_A 61 ------------------------------DLAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIG 109 (125)
T ss_dssp ------------------------------CTTTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEE
T ss_pred ------------------------------cccccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEE
Confidence 00112789999999999999999999999999999999999987 99999
Q ss_pred EEeHHHhHHHHH
Q psy15912 453 MITRKDLARYRV 464 (482)
Q Consensus 453 IITr~DLl~~~~ 464 (482)
+||++|++++..
T Consensus 110 vit~~dl~~~l~ 121 (125)
T 1pbj_A 110 VISATDILRAKM 121 (125)
T ss_dssp EEEHHHHHHHHC
T ss_pred EEEHHHHHHHHH
Confidence 999999998753
No 27
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.72 E-value=3.2e-17 Score=145.05 Aligned_cols=139 Identities=23% Similarity=0.366 Sum_probs=109.3
Q ss_pred cccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCC
Q psy15912 211 SNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKG 288 (482)
Q Consensus 211 ~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (482)
..++|+|+|.+ +++++.+++++.++++.|.+++++.+||+|++
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------------------- 47 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED----------------------------------- 47 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT-----------------------------------
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC-----------------------------------
Confidence 35899999998 89999999999999999999999999999975
Q ss_pred CCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhc
Q psy15912 289 DASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYK 368 (482)
Q Consensus 289 ~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~ 368 (482)
++++|+|+.+|+...+....
T Consensus 48 --------~~~~G~vt~~dl~~~~~~~~---------------------------------------------------- 67 (152)
T 4gqw_A 48 --------WKLVGLVSDYDLLALDSGDS---------------------------------------------------- 67 (152)
T ss_dssp --------CBEEEEEEHHHHTTCC--------------------------------------------------------
T ss_pred --------CeEEEEEEHHHHHHhhcccC----------------------------------------------------
Confidence 69999999999865332110
Q ss_pred cCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCC
Q psy15912 369 ENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNN 448 (482)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g 448 (482)
.+..+....... ......+++++|+++++++++++++.+++++|.+.+.+++||+|++|
T Consensus 68 ----------~~~~~~~~~~~~-----------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g 126 (152)
T 4gqw_A 68 ----------TWKTFNAVQKLL-----------SKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDG 126 (152)
T ss_dssp ----------CCHHHHHHHTC----------------CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTS
T ss_pred ----------cccchHHHHHHH-----------HHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCC
Confidence 000000000000 00012378999999999999999999999999999999999999899
Q ss_pred eEEEEEeHHHhHHHHHh
Q psy15912 449 HVVGMITRKDLARYRVW 465 (482)
Q Consensus 449 ~lvGIITr~DLl~~~~~ 465 (482)
+++|+||++|++++...
T Consensus 127 ~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 127 KLVGIITRGNVVRAALQ 143 (152)
T ss_dssp BEEEEEEHHHHHHHHHC
T ss_pred cEEEEEEHHHHHHHHHh
Confidence 99999999999998654
No 28
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.71 E-value=7.2e-17 Score=145.18 Aligned_cols=128 Identities=15% Similarity=0.204 Sum_probs=110.2
Q ss_pred CccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCC
Q psy15912 209 LSSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKG 288 (482)
Q Consensus 209 ~l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (482)
.+..++|+|+|.++ +++.+++++.++++.|.+++++.+||+|++
T Consensus 13 ~l~~~~v~~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~----------------------------------- 56 (159)
T 3fv6_A 13 KLKKLQVKDFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDRD----------------------------------- 56 (159)
T ss_dssp HHTTCBGGGSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECTT-----------------------------------
T ss_pred HHhhCCHHHHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCC-----------------------------------
Confidence 35678999999985 599999999999999999999999999975
Q ss_pred CCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhc
Q psy15912 289 DASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYK 368 (482)
Q Consensus 289 ~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~ 368 (482)
++++|+|+.+|+...+....
T Consensus 57 --------~~~~Givt~~dl~~~~~~~~---------------------------------------------------- 76 (159)
T 3fv6_A 57 --------AVLVGVLSRKDLLRASIGQQ---------------------------------------------------- 76 (159)
T ss_dssp --------SCEEEEEEHHHHHHHHTSCS----------------------------------------------------
T ss_pred --------CcEEEEEeHHHHHHHhhccC----------------------------------------------------
Confidence 68999999999987653210
Q ss_pred cCCCCCCCCCChhhhhhhCCCCCCCCccccCcccccccccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECC
Q psy15912 369 ENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNN 446 (482)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~ 446 (482)
.....+++++|.+ +++++++++++.+|+++|.+.+.+++||+|+
T Consensus 77 ----------------------------------~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 122 (159)
T 3fv6_A 77 ----------------------------------ELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD 122 (159)
T ss_dssp ----------------------------------CTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred ----------------------------------cccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 0012378999998 8899999999999999999999999999998
Q ss_pred CC---eEEEEEeHHHhHHHHHhh
Q psy15912 447 NN---HVVGMITRKDLARYRVWR 466 (482)
Q Consensus 447 ~g---~lvGIITr~DLl~~~~~~ 466 (482)
+| +++|+||++|++++...-
T Consensus 123 ~g~~~~~vGiit~~dil~~l~~~ 145 (159)
T 3fv6_A 123 TDKGFEVIGRVTKTNMTKILVSL 145 (159)
T ss_dssp CSSSEEEEEEEEHHHHHHHHHHH
T ss_pred CCcceeEEEEEEHHHHHHHHHHH
Confidence 88 999999999999986543
No 29
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.71 E-value=3.6e-17 Score=147.46 Aligned_cols=132 Identities=19% Similarity=0.260 Sum_probs=109.8
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
.++|+|+|.+++.++.+++++.++++.|.+++++.+||+|++
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-------------------------------------- 45 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN-------------------------------------- 45 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT--------------------------------------
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC--------------------------------------
Confidence 578999999999999999999999999999999999999975
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCC
Q psy15912 292 RKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQ 371 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~ 371 (482)
++++|+|+.+|+...+....... ...
T Consensus 46 -----~~lvGivt~~dl~~~~~~~~~~~------------------------------------------------~~~- 71 (160)
T 2o16_A 46 -----KKLLGIVSQRDLLAAQESSLQRS------------------------------------------------AQG- 71 (160)
T ss_dssp -----CBEEEEEEHHHHHHHHHHHCC------------------------------------------------------
T ss_pred -----CcEEEEEeHHHHHHHHHHhhccc------------------------------------------------ccc-
Confidence 68999999999987765431000 000
Q ss_pred CCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEE
Q psy15912 372 NWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVV 451 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lv 451 (482)
.......+++++|+++++++++++++.+|.++|.+.+.+++||+|+ |+++
T Consensus 72 -----------------------------~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lv 121 (160)
T 2o16_A 72 -----------------------------DSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLV 121 (160)
T ss_dssp ---------------------------------CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEE
T ss_pred -----------------------------cchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEE
Confidence 0001123789999999999999999999999999999999999987 9999
Q ss_pred EEEeHHHhHHHHHh
Q psy15912 452 GMITRKDLARYRVW 465 (482)
Q Consensus 452 GIITr~DLl~~~~~ 465 (482)
|+||++|++++...
T Consensus 122 Giit~~dil~~~~~ 135 (160)
T 2o16_A 122 GIITDSDFVTIAIN 135 (160)
T ss_dssp EEECHHHHHHHHHH
T ss_pred EEEEHHHHHHHHHH
Confidence 99999999987544
No 30
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.71 E-value=4.6e-17 Score=144.54 Aligned_cols=134 Identities=15% Similarity=0.144 Sum_probs=111.4
Q ss_pred CCccccchhhccc--CCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCC
Q psy15912 208 PLSSNITARIVKS--HPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSS 285 (482)
Q Consensus 208 ~~l~~l~a~dvM~--~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (482)
..+..++|+|+|. +++.++.+++++.++++.|.+++++.+||+|++
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~-------------------------------- 57 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM-------------------------------- 57 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT--------------------------------
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCC--------------------------------
Confidence 3467899999999 569999999999999999999999999999975
Q ss_pred CCCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhh
Q psy15912 286 HKGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHK 365 (482)
Q Consensus 286 ~~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~ 365 (482)
++++|+|+.+|+...+.....
T Consensus 58 -----------~~~~Givt~~dl~~~~~~~~~------------------------------------------------ 78 (150)
T 3lqn_A 58 -----------YKLHGLISTAMILDGILGLER------------------------------------------------ 78 (150)
T ss_dssp -----------CBEEEEEEHHHHHHHTBCSSS------------------------------------------------
T ss_pred -----------CCEEEEEEHHHHHHHHHhhcc------------------------------------------------
Confidence 699999999999876532100
Q ss_pred hhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEEC
Q psy15912 366 IYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVN 445 (482)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD 445 (482)
.. .......+++++|+++++++++++++.++.++|.+.+. +||||
T Consensus 79 ------------~~---------------------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd 123 (150)
T 3lqn_A 79 ------------IE---------------------FERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN 123 (150)
T ss_dssp ------------BC---------------------GGGGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC
T ss_pred ------------cc---------------------hhHHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC
Confidence 00 00011237899999999999999999999999999886 99999
Q ss_pred CCCeEEEEEeHHHhHHHHHhhc
Q psy15912 446 NNNHVVGMITRKDLARYRVWRH 467 (482)
Q Consensus 446 ~~g~lvGIITr~DLl~~~~~~~ 467 (482)
++|+++|+||++|++++.....
T Consensus 124 ~~g~~~Giit~~dil~~l~~~~ 145 (150)
T 3lqn_A 124 EDGYFEGILTRRAILKLLNKKV 145 (150)
T ss_dssp TTCBEEEEEEHHHHHHHHHHHC
T ss_pred CCCcEEEEEEHHHHHHHHHHHh
Confidence 8999999999999999866543
No 31
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.71 E-value=3.8e-17 Score=149.09 Aligned_cols=152 Identities=22% Similarity=0.390 Sum_probs=109.4
Q ss_pred ccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 212 NITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 212 ~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
.++|+|+|.+ +++++.+++++.++++.|.+++++.+||+|++
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~------------------------------------ 46 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN------------------------------------ 46 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT------------------------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC------------------------------------
Confidence 5789999998 89999999999999999999999999999975
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
++++|+|+.+|+.+......... +...+ . + ..
T Consensus 47 -------~~~~Givt~~dl~~~~~~~~~~~----~~~~~----~-------~--------------------------~~ 78 (180)
T 3sl7_A 47 -------WTLVGVVSDYDLLALDSISGRSQ----NDTNL----F-------P--------------------------DV 78 (180)
T ss_dssp -------CBEEEEEEHHHHTCC----------------------------------------------------------
T ss_pred -------CeEEEEEEHHHHHhhhhhccccC----Ccccc----c-------c--------------------------cc
Confidence 69999999999975322110000 00000 0 0 00
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCe
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNH 449 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~ 449 (482)
...|.. ...+..... .....+++++|+++++++++++++.+|+++|.+.+.+++||+|++|+
T Consensus 79 ~~~~~~----~~~~~~~~~--------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 140 (180)
T 3sl7_A 79 DSTWKT----FNELQKLIS--------------KTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGK 140 (180)
T ss_dssp --CCCS----HHHHHHHHH--------------TTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCB
T ss_pred cchhhh----hHHHHHHHh--------------ccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCe
Confidence 000000 000000000 01123799999999999999999999999999999999999998999
Q ss_pred EEEEEeHHHhHHHHHh
Q psy15912 450 VVGMITRKDLARYRVW 465 (482)
Q Consensus 450 lvGIITr~DLl~~~~~ 465 (482)
++|+||++|++++...
T Consensus 141 ~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 141 LIGILTRGNVVRAALQ 156 (180)
T ss_dssp EEEEEEHHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHHH
Confidence 9999999999998654
No 32
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.71 E-value=1.2e-16 Score=143.23 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=112.2
Q ss_pred CCccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCe-eeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 208 PLSSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNG-FPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 208 ~~l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~-fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
.....++|+|+|.+++.++.+++++.++++.|.+++++. +||+|++
T Consensus 11 ~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~--------------------------------- 57 (157)
T 1o50_A 11 HHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN--------------------------------- 57 (157)
T ss_dssp TTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT---------------------------------
T ss_pred hhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC---------------------------------
Confidence 456789999999999999999999999999999999999 9999863
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhh
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKI 366 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~ 366 (482)
+++|+|+..|+...+..... .
T Consensus 58 -----------~~vGivt~~dl~~~~~~~~~------------------------------------------------~ 78 (157)
T 1o50_A 58 -----------KLVGMIPVMHLLKVSGFHFF------------------------------------------------G 78 (157)
T ss_dssp -----------EEEEEEEHHHHHHHHHHHHH------------------------------------------------C
T ss_pred -----------EEEEEEEHHHHHHHHhhhHH------------------------------------------------h
Confidence 89999999999876543200 0
Q ss_pred hccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC
Q psy15912 367 YKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN 446 (482)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~ 446 (482)
+.. ....|..... .....+++++|++ ++++++++++.+|.++|.+.+.+++||+|+
T Consensus 79 ~~~---------~~~~~~~~~~--------------~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (157)
T 1o50_A 79 FIP---------KEELIRSSMK--------------RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE 134 (157)
T ss_dssp CCC----------------CCC--------------CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hhc---------cHHHHHHHHH--------------HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC
Confidence 000 0000000000 0122478999999 999999999999999999999999999998
Q ss_pred CCeEEEEEeHHHhHHHHHh
Q psy15912 447 NNHVVGMITRKDLARYRVW 465 (482)
Q Consensus 447 ~g~lvGIITr~DLl~~~~~ 465 (482)
+|+++|+||++|++++...
T Consensus 135 ~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 135 KGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp TSCEEEEEEHHHHHHHHHH
T ss_pred CCEEEEEEEHHHHHHHHHH
Confidence 8999999999999987653
No 33
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.70 E-value=1.8e-17 Score=148.85 Aligned_cols=119 Identities=18% Similarity=0.319 Sum_probs=103.4
Q ss_pred ccccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCC
Q psy15912 210 SSNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHK 287 (482)
Q Consensus 210 l~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (482)
+..++|+|+|++ +++++++++++.++++.|.+++++.+||+|++
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~---------------------------------- 80 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGED---------------------------------- 80 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS----------------------------------
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC----------------------------------
Confidence 456899999997 79999999999999999999999999999875
Q ss_pred CCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhh
Q psy15912 288 GDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIY 367 (482)
Q Consensus 288 ~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~ 367 (482)
.++++|+|+.+|+...+...
T Consensus 81 --------~~~lvGivt~~dl~~~~~~~---------------------------------------------------- 100 (156)
T 3oi8_A 81 --------KDEVLGILHAKDLLKYMFNP---------------------------------------------------- 100 (156)
T ss_dssp --------TTCEEEEEEGGGGGGGSSCG----------------------------------------------------
T ss_pred --------CCcEEEEEEHHHHHHHHHcC----------------------------------------------------
Confidence 14899999999975432110
Q ss_pred ccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCC
Q psy15912 368 KENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN 447 (482)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~ 447 (482)
...+++++|.+ ++++++++++.+|+++|.+.+.+++||+|++
T Consensus 101 -------------------------------------~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~ 142 (156)
T 3oi8_A 101 -------------------------------------EQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEY 142 (156)
T ss_dssp -------------------------------------GGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTT
T ss_pred -------------------------------------CcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCC
Confidence 11268899976 8899999999999999999999999999999
Q ss_pred CeEEEEEeHHHhH
Q psy15912 448 NHVVGMITRKDLA 460 (482)
Q Consensus 448 g~lvGIITr~DLl 460 (482)
|+++||||++|++
T Consensus 143 g~~~Givt~~Dil 155 (156)
T 3oi8_A 143 GGTSGLVTFEDII 155 (156)
T ss_dssp SSEEEEEEHHHHC
T ss_pred CCEEEEEEHHHhc
Confidence 9999999999986
No 34
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.70 E-value=8.7e-17 Score=151.66 Aligned_cols=123 Identities=12% Similarity=0.140 Sum_probs=107.8
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhC---CCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKAT---SHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKG 288 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~---~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (482)
..+|+++|++++++++++.++.++++.|++. +++.+||+|++
T Consensus 53 ~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~----------------------------------- 97 (205)
T 3kxr_A 53 ENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA----------------------------------- 97 (205)
T ss_dssp TTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT-----------------------------------
T ss_pred cchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC-----------------------------------
Confidence 4589999999999999999999999999986 67899999975
Q ss_pred CCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhc
Q psy15912 289 DASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYK 368 (482)
Q Consensus 289 ~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~ 368 (482)
++++|+|+.+||+.. .
T Consensus 98 --------~~lvGivt~~dll~~---~----------------------------------------------------- 113 (205)
T 3kxr_A 98 --------DKYLGTVRRYDIFKH---E----------------------------------------------------- 113 (205)
T ss_dssp --------CBEEEEEEHHHHTTS---C-----------------------------------------------------
T ss_pred --------CeEEEEEEHHHHHhC---C-----------------------------------------------------
Confidence 699999999997421 0
Q ss_pred cCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCC
Q psy15912 369 ENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNN 448 (482)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g 448 (482)
...+++++|++++++|++++++.++.++|++.+++++||||++|
T Consensus 114 ------------------------------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g 157 (205)
T 3kxr_A 114 ------------------------------------PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAG 157 (205)
T ss_dssp ------------------------------------TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTS
T ss_pred ------------------------------------CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCC
Confidence 01278999999999999999999999999999999999999999
Q ss_pred eEEEEEeHHHhHHHHHhhccc
Q psy15912 449 HVVGMITRKDLARYRVWRHGG 469 (482)
Q Consensus 449 ~lvGIITr~DLl~~~~~~~~~ 469 (482)
+++||||+.|+++.......+
T Consensus 158 ~lvGiIT~~Dil~~i~~e~~e 178 (205)
T 3kxr_A 158 ELIGRVTLRAATALVREHYEA 178 (205)
T ss_dssp BEEEEEEHHHHHHHHHHHHC-
T ss_pred eEEEEEEHHHHHHHHHHHHHH
Confidence 999999999999987655443
No 35
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.70 E-value=4.2e-17 Score=141.62 Aligned_cols=125 Identities=21% Similarity=0.341 Sum_probs=105.3
Q ss_pred CccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCC
Q psy15912 209 LSSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKG 288 (482)
Q Consensus 209 ~l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (482)
.+..++++|+|.+++.++++++++.++++.|.+++++.+||+|++
T Consensus 4 ~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------------------- 48 (133)
T 1y5h_A 4 PFTMTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDD----------------------------------- 48 (133)
T ss_dssp ----CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGG-----------------------------------
T ss_pred hhhhcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCC-----------------------------------
Confidence 345679999999999999999999999999999999999999865
Q ss_pred CCCCCCCCCeEEEEEeHHHHHH-HHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhh
Q psy15912 289 DASRKESPGRLVGLILRSQLII-LIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIY 367 (482)
Q Consensus 289 ~~~~~~~~g~lvGiIs~~dL~~-~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~ 367 (482)
++++|+|+.+|+.. .+....
T Consensus 49 --------~~~~Givt~~dl~~~~~~~~~--------------------------------------------------- 69 (133)
T 1y5h_A 49 --------DRLHGMLTDRDIVIKGLAAGL--------------------------------------------------- 69 (133)
T ss_dssp --------GBEEEEEEHHHHHHTTGGGTC---------------------------------------------------
T ss_pred --------CeEEEEEeHHHHHHHHHhcCC---------------------------------------------------
Confidence 69999999999873 322110
Q ss_pred ccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCC
Q psy15912 368 KENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN 447 (482)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~ 447 (482)
.....+++++|+++++++++++++.++.+.|.+.+.+++||+|+
T Consensus 70 -----------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~- 113 (133)
T 1y5h_A 70 -----------------------------------DPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE- 113 (133)
T ss_dssp -----------------------------------CTTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-
T ss_pred -----------------------------------CccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-
Confidence 00113789999999999999999999999999999999999986
Q ss_pred CeEEEEEeHHHhHHHH
Q psy15912 448 NHVVGMITRKDLARYR 463 (482)
Q Consensus 448 g~lvGIITr~DLl~~~ 463 (482)
|+++|+||++|++++.
T Consensus 114 g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 114 HRLVGIVTEADIARHL 129 (133)
T ss_dssp TEEEEEEEHHHHHHTC
T ss_pred CEEEEEEEHHHHHHHH
Confidence 9999999999999764
No 36
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.69 E-value=1.3e-16 Score=146.32 Aligned_cols=124 Identities=18% Similarity=0.203 Sum_probs=106.8
Q ss_pred ccccchhhccc--CCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCC
Q psy15912 210 SSNITARIVKS--HPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHK 287 (482)
Q Consensus 210 l~~l~a~dvM~--~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (482)
+..++|+|+|+ +++++++++.++.++++.|++++++.+||+|++
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~---------------------------------- 78 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGS---------------------------------- 78 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSS----------------------------------
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCC----------------------------------
Confidence 45678999997 478999999999999999999999999999864
Q ss_pred CCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhh
Q psy15912 288 GDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIY 367 (482)
Q Consensus 288 ~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~ 367 (482)
.++++|+|+.+|+...+....
T Consensus 79 --------~~~lvGivt~~Dl~~~~~~~~--------------------------------------------------- 99 (173)
T 3ocm_A 79 --------LDEVVGIGRAKDLVADLITEG--------------------------------------------------- 99 (173)
T ss_dssp --------TTSEEEEEEHHHHHHHHHHHS---------------------------------------------------
T ss_pred --------CCCEEEEEEHHHHHHHHhcCC---------------------------------------------------
Confidence 258999999999987654320
Q ss_pred ccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCC
Q psy15912 368 KENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN 447 (482)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~ 447 (482)
..+++ |.+++++|++++++.+++++|.+.+.+++||+|++
T Consensus 100 --------------------------------------~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~ 139 (173)
T 3ocm_A 100 --------------------------------------RVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEF 139 (173)
T ss_dssp --------------------------------------SCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTT
T ss_pred --------------------------------------cchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCC
Confidence 01566 45778999999999999999999999999999999
Q ss_pred CeEEEEEeHHHhHHHHHhh
Q psy15912 448 NHVVGMITRKDLARYRVWR 466 (482)
Q Consensus 448 g~lvGIITr~DLl~~~~~~ 466 (482)
|+++||||++|+++.....
T Consensus 140 g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 140 GAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp CCEEEEECHHHHHHHHHCC
T ss_pred CCEEEEEeHHHHHHHHhCc
Confidence 9999999999999987643
No 37
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.69 E-value=8.4e-17 Score=157.38 Aligned_cols=197 Identities=15% Similarity=0.248 Sum_probs=130.5
Q ss_pred cccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCC
Q psy15912 211 SNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDA 290 (482)
Q Consensus 211 ~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (482)
...+++|+|.+++.++++++++.++++.|.+.+.+.+||+|++
T Consensus 58 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~------------------------------------- 100 (282)
T 2yzq_A 58 DEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSK------------------------------------- 100 (282)
T ss_dssp ------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTT-------------------------------------
T ss_pred ccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-------------------------------------
Confidence 3568999999999999999999999999999999999999975
Q ss_pred CCCCCCCeEEEEEeHHHHHH-HHHhh-hhccC-----CC------CCCccchh---hhhhhccccccccCCCCccccchh
Q psy15912 291 SRKESPGRLVGLILRSQLII-LIKHK-IYKEN-----QN------WPDDQLSS---EIFHAEYRCRPRIWSPGRLVGLIL 354 (482)
Q Consensus 291 ~~~~~~g~lvGiIs~~dL~~-~l~~~-~~~~~-----~~------~p~~~~~~---~~~~~~~~~~~~~~~~~~~~G~i~ 354 (482)
++++|+++.+|+.+ .+... ..... .. .++..+.. .+.....++.|++++.+.++|+++
T Consensus 101 ------~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit 174 (282)
T 2yzq_A 101 ------GKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVD 174 (282)
T ss_dssp ------SCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEE
T ss_pred ------CEEEEEEEHHHHHHHHHhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEE
Confidence 68999999999988 65432 11110 00 11222221 223344566888888889999999
Q ss_pred hHHHHH------HHHhh-hhccC-CCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCH
Q psy15912 355 RSQLII------LIKHK-IYKEN-QNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSL 426 (482)
Q Consensus 355 ~~~l~~------~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l 426 (482)
.+|+.. .+... ..... ..|- .......+.. .........+++++|+++++++++++++
T Consensus 175 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~------~~~~~~~~~~v~~im~~~~~~v~~~~~l 240 (282)
T 2yzq_A 175 ETDLLRDSEIVRIMKSTELAASSEEEWI--------LESHPTLLFE------KFELQLPNKPVAEIMTRDVIVATPHMTV 240 (282)
T ss_dssp GGGGGGCGGGCC----------------------------------------------CCCBGGGTCBSSCCCBCTTSBH
T ss_pred HHHHhhhhhhhhhhccchhhhhhhhhhh--------cccchHHHHh------HhhhhhccCCHHHhcCCCCceeCCCCCH
Confidence 999872 22100 00000 0000 0000000000 0000112358999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 427 PRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 427 ~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
.+|.++|.+.+++++||+|++|+++|+||++|++++..
T Consensus 241 ~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 241 HEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGC
T ss_pred HHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHH
Confidence 99999999999999999998889999999999998653
No 38
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.69 E-value=2.5e-16 Score=137.18 Aligned_cols=122 Identities=16% Similarity=0.273 Sum_probs=105.8
Q ss_pred cchhhccc---CCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 213 ITARIVKS---HPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 213 l~a~dvM~---~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
++++|+|. +++.++.+++++.++++.|.+++++.+||+| +
T Consensus 6 ~~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~------------------------------------ 48 (135)
T 2rc3_A 6 KTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-D------------------------------------ 48 (135)
T ss_dssp CBHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T------------------------------------
T ss_pred eeHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C------------------------------------
Confidence 48999999 8999999999999999999999999999998 4
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
++++|+|+.+|+.+.+....
T Consensus 49 -------~~~~Givt~~dl~~~~~~~~----------------------------------------------------- 68 (135)
T 2rc3_A 49 -------EKLVGILTERDFSRKSYLLD----------------------------------------------------- 68 (135)
T ss_dssp -------TEEEEEEEHHHHHHHGGGSS-----------------------------------------------------
T ss_pred -------CEEEEEEehHHHHHHHHHcC-----------------------------------------------------
Confidence 59999999999875332110
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCe
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNH 449 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~ 449 (482)
. .....+++++|++++.++++++++.++.+.|.+.+.+++||+| +|+
T Consensus 69 -~-------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~ 115 (135)
T 2rc3_A 69 -K-------------------------------PVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGK 115 (135)
T ss_dssp -S-------------------------------CGGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTE
T ss_pred -C-------------------------------CcccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCE
Confidence 0 0012378999999999999999999999999999999999999 799
Q ss_pred EEEEEeHHHhHHHHH
Q psy15912 450 VVGMITRKDLARYRV 464 (482)
Q Consensus 450 lvGIITr~DLl~~~~ 464 (482)
++|+||++|++++..
T Consensus 116 ~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 116 VIGLLSIGDLVKDAI 130 (135)
T ss_dssp EEEEEEHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHH
Confidence 999999999998764
No 39
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.69 E-value=2.7e-16 Score=144.24 Aligned_cols=154 Identities=29% Similarity=0.447 Sum_probs=113.0
Q ss_pred CCccccchhhcccCC----eeEe--cCCCCHHHHHHHHHhCCCCeeeEe--cCCCCCCCCCCCccccCCCCCCCCCCCCc
Q psy15912 208 PLSSNITARIVKSHP----VICL--RPLETVGNIIDVLKATSHNGFPIV--DVEPMTKHSSDGAEQSSAGSTDSHKGDTS 279 (482)
Q Consensus 208 ~~l~~l~a~dvM~~~----~~~l--~~~~~i~~~~~~l~~~~~~~fPVV--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (482)
..+..++|+|+|.+. ++++ .+++++.++++.|.+++++.+||+ |++
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~-------------------------- 59 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES-------------------------- 59 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT--------------------------
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC--------------------------
Confidence 456789999999987 7888 999999999999999999999999 443
Q ss_pred cccCCCCCCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHH
Q psy15912 280 HKRDSSHKGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLI 359 (482)
Q Consensus 280 ~~~~~~~~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~ 359 (482)
++++|+|+..|+...+........ ...+ +..
T Consensus 60 -----------------~~lvGiit~~dl~~~~~~~~~~~~-~~~~---------------------~~~---------- 90 (185)
T 2j9l_A 60 -----------------QRLVGFVLRRDLIISIENARKKQD-GVVS---------------------TSI---------- 90 (185)
T ss_dssp -----------------CBEEEEEEHHHHHHHHHHHHTSCS-CCCT---------------------TCE----------
T ss_pred -----------------CeEEEEEEHHHHHHHHHhhcccCC-Cccc---------------------cce----------
Confidence 799999999999887654310000 0000 000
Q ss_pred HHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCC
Q psy15912 360 ILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLR 439 (482)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr 439 (482)
..+....+.. ........+++++|+++++++++++++.+|+++|.+.+.+
T Consensus 91 ---------------------~~~~~~~~~~---------~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~ 140 (185)
T 2j9l_A 91 ---------------------IYFTEHSPPL---------PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLR 140 (185)
T ss_dssp ---------------------EECSSSCCCC---------CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCS
T ss_pred ---------------------eecccCCccc---------ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCc
Confidence 0000000000 0001123479999999999999999999999999999999
Q ss_pred EEEEECCCCeEEEEEeHHHhHHHHHhhc
Q psy15912 440 HVVVVNNNNHVVGMITRKDLARYRVWRH 467 (482)
Q Consensus 440 ~lpVVD~~g~lvGIITr~DLl~~~~~~~ 467 (482)
++||+| +|+++|+||++|++++.....
T Consensus 141 ~l~Vvd-~g~~vGiit~~dll~~l~~~~ 167 (185)
T 2j9l_A 141 QCLVTH-NGRLLGIITKKDVLKHIAQMA 167 (185)
T ss_dssp EEEEEE-TTEEEEEEEHHHHHHHHHHHC
T ss_pred EEEEEE-CCEEEEEEEHHHHHHHHHHhh
Confidence 999998 899999999999999866443
No 40
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.68 E-value=1.4e-16 Score=142.37 Aligned_cols=131 Identities=15% Similarity=0.095 Sum_probs=109.1
Q ss_pred cccchhhccc--CCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCC
Q psy15912 211 SNITARIVKS--HPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKG 288 (482)
Q Consensus 211 ~~l~a~dvM~--~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (482)
...+++|+|+ +++.++++++++.++++.|.+++++.+||+|++
T Consensus 13 ~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~----------------------------------- 57 (156)
T 3ctu_A 13 LLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE----------------------------------- 57 (156)
T ss_dssp HHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC------------------------------------
T ss_pred HHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCC-----------------------------------
Confidence 3457899999 689999999999999999999999999999975
Q ss_pred CCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhc
Q psy15912 289 DASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYK 368 (482)
Q Consensus 289 ~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~ 368 (482)
|+++|+|+.+|+...+......
T Consensus 58 --------~~~~Giit~~dl~~~~~~~~~~-------------------------------------------------- 79 (156)
T 3ctu_A 58 --------KQFVGTIGLRDIMAYQMEHDLS-------------------------------------------------- 79 (156)
T ss_dssp --------CBEEEEEEHHHHHHHHHHHTCC--------------------------------------------------
T ss_pred --------CEEEEEEcHHHHHHHHHhcccc--------------------------------------------------
Confidence 6999999999998876543100
Q ss_pred cCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCC
Q psy15912 369 ENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNN 448 (482)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g 448 (482)
.. .....+++++|+++++++++++++.+|.++|.+.+ ++||||++|
T Consensus 80 -----------~~---------------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g 125 (156)
T 3ctu_A 80 -----------QE---------------------IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEG 125 (156)
T ss_dssp -----------HH---------------------HHTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTS
T ss_pred -----------cc---------------------ccccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCC
Confidence 00 00123789999999999999999999999999886 799999899
Q ss_pred eEEEEEeHHHhHHHHHhhcc
Q psy15912 449 HVVGMITRKDLARYRVWRHG 468 (482)
Q Consensus 449 ~lvGIITr~DLl~~~~~~~~ 468 (482)
+++|+||++|++++......
T Consensus 126 ~~~Giit~~dil~~l~~~~~ 145 (156)
T 3ctu_A 126 IFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp BEEEEEETTHHHHHHHHHSC
T ss_pred eEEEEEEHHHHHHHHHHHHH
Confidence 99999999999998765543
No 41
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.68 E-value=3.1e-16 Score=140.75 Aligned_cols=134 Identities=18% Similarity=0.316 Sum_probs=108.8
Q ss_pred ccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 210 SSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 210 l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
...++|+|+|.+++.++.+++++.++++.|.+++++.+||+|+++
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~----------------------------------- 54 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTE----------------------------------- 54 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTT-----------------------------------
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCC-----------------------------------
Confidence 456899999999999999999999999999999999999999620
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhcc
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKE 369 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~ 369 (482)
+++++|+|+..|+...+.......
T Consensus 55 ------~~~~~Givt~~dl~~~~~~~~~~~-------------------------------------------------- 78 (164)
T 2pfi_A 55 ------SQILVGIVQRAQLVQALQAEPPSR-------------------------------------------------- 78 (164)
T ss_dssp ------TCBEEEEEEHHHHHHHHHC-------------------------------------------------------
T ss_pred ------CCEEEEEEEHHHHHHHHHhhcccc--------------------------------------------------
Confidence 269999999999987664321000
Q ss_pred CCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccC------ceeeeCCCCHHHHHHHHHHcCCCEEEE
Q psy15912 370 NQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTS------PFSVQDSTSLPRVFKLFRALGLRHVVV 443 (482)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~------p~~V~~~~~l~~a~~~f~~~~lr~lpV 443 (482)
.+ ....+++++|.++ ++++++++++.++.++|.+.+.+++||
T Consensus 79 -----------------~~---------------~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpV 126 (164)
T 2pfi_A 79 -----------------AP---------------GHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFV 126 (164)
T ss_dssp ----------------------------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEE
T ss_pred -----------------CC---------------cccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEE
Confidence 00 0012566777765 789999999999999999999999999
Q ss_pred ECCCCeEEEEEeHHHhHHHHHhhc
Q psy15912 444 VNNNNHVVGMITRKDLARYRVWRH 467 (482)
Q Consensus 444 VD~~g~lvGIITr~DLl~~~~~~~ 467 (482)
+| +|+++|+||++|++++.....
T Consensus 127 vd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 127 TS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp EE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred EE-CCEEEEEEEHHHHHHHHHhhh
Confidence 98 799999999999999865443
No 42
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.68 E-value=2.9e-16 Score=157.03 Aligned_cols=178 Identities=13% Similarity=0.218 Sum_probs=134.5
Q ss_pred chhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCC
Q psy15912 214 TARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRK 293 (482)
Q Consensus 214 ~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (482)
++.++|.++++++++++++.++++.|.+++++.+||+|+++.
T Consensus 115 ~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~-------------------------------------- 156 (323)
T 3t4n_C 115 RALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEE-------------------------------------- 156 (323)
T ss_dssp HHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTT--------------------------------------
T ss_pred HHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCC--------------------------------------
Confidence 455667889999999999999999999999999999997621
Q ss_pred CCCCeEEEEEeHHHHHHHHHhhhh---------ccC---C------CCCCccch---hhhhhhccccccccCCCCccccc
Q psy15912 294 ESPGRLVGLILRSQLIILIKHKIY---------KEN---Q------NWPDDQLS---SEIFHAEYRCRPRIWSPGRLVGL 352 (482)
Q Consensus 294 ~~~g~lvGiIs~~dL~~~l~~~~~---------~~~---~------~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~G~ 352 (482)
.+..+++|+++.+|+++.+..... .+. . ..+++.+. ..+.....++.|+++++|.++|+
T Consensus 157 ~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Gi 236 (323)
T 3t4n_C 157 THREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINV 236 (323)
T ss_dssp TCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEE
T ss_pred CCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEE
Confidence 001249999999999987653210 011 0 11222222 12345567788999999999999
Q ss_pred hhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCcccccccccccccccc------CceeeeCCCCH
Q psy15912 353 ILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNT------SPFSVQDSTSL 426 (482)
Q Consensus 353 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~------~p~~V~~~~~l 426 (482)
++++|++..+....+.. ...+++++|++ +++++++++++
T Consensus 237 it~~dl~~~~~~~~~~~-----------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l 281 (323)
T 3t4n_C 237 YEAYDVLGLIKGGIYND-----------------------------------LSLSVGEALMRRSDDFEGVYTCTKNDKL 281 (323)
T ss_dssp EETTHHHHHHHTTHHHH-----------------------------------TTSBHHHHGGGSCTTCCCCEEECTTCBH
T ss_pred EeHHHHHHHHhhchhhh-----------------------------------ccCCHHHHHhhccccCCCCEEECCCCCH
Confidence 99999998776443221 12378899988 78999999999
Q ss_pred HHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 427 PRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 427 ~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
.++.+.|.+.+.+++||+|++|+++||||++|++++..
T Consensus 282 ~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~ 319 (323)
T 3t4n_C 282 STIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 319 (323)
T ss_dssp HHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 99999999999999999998999999999999999865
No 43
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.68 E-value=9.9e-17 Score=161.01 Aligned_cols=175 Identities=15% Similarity=0.253 Sum_probs=133.1
Q ss_pred chhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecC-CCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCC
Q psy15912 214 TARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDV-EPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASR 292 (482)
Q Consensus 214 ~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (482)
+++++|.+++.++.+++++.++++.|.+++++.+||+|+ +
T Consensus 119 ~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~--------------------------------------- 159 (330)
T 2v8q_E 119 VYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPES--------------------------------------- 159 (330)
T ss_dssp HHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTT---------------------------------------
T ss_pred HHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCC---------------------------------------
Confidence 346789999999999999999999999999999999997 4
Q ss_pred CCCCCeEEEEEeHHHHHHHHHhhhhc-------c--------C--C----CCCCccchh---hhhhhccccccccCCCCc
Q psy15912 293 KESPGRLVGLILRSQLIILIKHKIYK-------E--------N--Q----NWPDDQLSS---EIFHAEYRCRPRIWSPGR 348 (482)
Q Consensus 293 ~~~~g~lvGiIs~~dL~~~l~~~~~~-------~--------~--~----~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 348 (482)
|+++|+|+.+|+++.+...... . . . ..+++.+.. .+.....++.|++++++.
T Consensus 160 ----~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~ 235 (330)
T 2v8q_E 160 ----GNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGR 235 (330)
T ss_dssp ----CCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSB
T ss_pred ----CcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCc
Confidence 6899999999999877532110 0 0 0 012222221 233455677888888899
Q ss_pred cccchhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCcccccccccccccc------ccCceeeeC
Q psy15912 349 LVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFM------NTSPFSVQD 422 (482)
Q Consensus 349 ~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im------~~~p~~V~~ 422 (482)
++|+++.+|+........+.. ...++.++| .++++++++
T Consensus 236 l~Giit~~dl~~~~~~~~~~~-----------------------------------~~~~v~~~~~~~~~~~~~~~~v~~ 280 (330)
T 2v8q_E 236 VVDIYSKFDVINLAAEKTYNN-----------------------------------LDVSVTKALQHRSHYFEGVLKCYL 280 (330)
T ss_dssp EEEEEEGGGTGGGGGSSCCCC-----------------------------------CSSBHHHHGGGCCSCCCSCCEECT
T ss_pred EEEEEEHHHHHHHHhcccccc-----------------------------------ccCcHHHHHhccccccCCCeEECC
Confidence 999999998874432211100 012566666 588999999
Q ss_pred CCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHHhh
Q psy15912 423 STSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRVWR 466 (482)
Q Consensus 423 ~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~~~ 466 (482)
++++.++.+.|.+.+.+++||+|++|+++|+||++|++++....
T Consensus 281 ~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 281 HETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSS
T ss_pred CCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhh
Confidence 99999999999999999999999889999999999999986543
No 44
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.68 E-value=2.9e-16 Score=140.26 Aligned_cols=133 Identities=20% Similarity=0.203 Sum_probs=108.6
Q ss_pred CccccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 209 LSSNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 209 ~l~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
.+..++++|+|.+ ++.++.+++++.++++.|.+++++.+||+|++
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--------------------------------- 53 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS--------------------------------- 53 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT---------------------------------
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCC---------------------------------
Confidence 4667899999997 89999999999999999999999999999975
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhh
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKI 366 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~ 366 (482)
++++|+|+..|+...+.....
T Consensus 54 ----------~~~~Givt~~dl~~~~~~~~~------------------------------------------------- 74 (157)
T 2emq_A 54 ----------YKLHGLISMTMMMDAILGLER------------------------------------------------- 74 (157)
T ss_dssp ----------CCEEEEEEHHHHHHHSBCSSS-------------------------------------------------
T ss_pred ----------CCEEEEeeHHHHHHHHhcccc-------------------------------------------------
Confidence 689999999998765432100
Q ss_pred hccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC
Q psy15912 367 YKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN 446 (482)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~ 446 (482)
++. ......+++++|+++++++++++++.++++.|.+.+. +||+|+
T Consensus 75 -----------~~~---------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~ 120 (157)
T 2emq_A 75 -----------IEF---------------------ERLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND 120 (157)
T ss_dssp -----------BCG---------------------GGGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS
T ss_pred -----------cch---------------------HHhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC
Confidence 000 0001237899999999999999999999999999987 999998
Q ss_pred CCeEEEEEeHHHhHHHHHhhc
Q psy15912 447 NNHVVGMITRKDLARYRVWRH 467 (482)
Q Consensus 447 ~g~lvGIITr~DLl~~~~~~~ 467 (482)
+|+++|+||++|++++.....
T Consensus 121 ~g~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 121 DGYFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp SSSEEEEEEHHHHHHHHHHTT
T ss_pred CCeEEEEEEHHHHHHHHHHHh
Confidence 899999999999999865443
No 45
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.67 E-value=4.6e-16 Score=143.40 Aligned_cols=125 Identities=21% Similarity=0.277 Sum_probs=109.0
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
.++|+|+|.++++++.+++++.++++.|.+++++.+||+|++
T Consensus 8 ~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-------------------------------------- 49 (184)
T 1pvm_A 8 FMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-------------------------------------- 49 (184)
T ss_dssp CCBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT--------------------------------------
T ss_pred ccCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC--------------------------------------
Confidence 479999999999999999999999999999999999999865
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCC
Q psy15912 292 RKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQ 371 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~ 371 (482)
++++|+|+.+|++..+....
T Consensus 50 -----g~~vGivt~~dl~~~~~~~~------------------------------------------------------- 69 (184)
T 1pvm_A 50 -----GNDVGLLSERSIIKRFIPRN------------------------------------------------------- 69 (184)
T ss_dssp -----SCEEEEEEHHHHHHHTGGGC-------------------------------------------------------
T ss_pred -----CcEEEEEeHHHHHHHHhhcc-------------------------------------------------------
Confidence 68999999999976543210
Q ss_pred CCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEE
Q psy15912 372 NWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVV 451 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lv 451 (482)
......+++++|.++++++++++++.+|+++|.+.+.+++||+|++|+++
T Consensus 70 ------------------------------~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~ 119 (184)
T 1pvm_A 70 ------------------------------KKPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVV 119 (184)
T ss_dssp ------------------------------CCGGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEE
T ss_pred ------------------------------cCcccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEE
Confidence 00012378999999999999999999999999999999999999889999
Q ss_pred EEEeHHHhHHHHH
Q psy15912 452 GMITRKDLARYRV 464 (482)
Q Consensus 452 GIITr~DLl~~~~ 464 (482)
|+||++|++++..
T Consensus 120 Givt~~dll~~~~ 132 (184)
T 1pvm_A 120 GIVTLTDLSRYLS 132 (184)
T ss_dssp EEEEHHHHTTTSC
T ss_pred EEEEHHHHHHHHH
Confidence 9999999998644
No 46
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.67 E-value=9.4e-17 Score=158.59 Aligned_cols=175 Identities=14% Similarity=0.246 Sum_probs=139.5
Q ss_pred CCCccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 207 PPLSSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 207 ~~~l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
.......+|+|+|.++++++.+++++.++++.|.+++++.+||+| +
T Consensus 14 ~~~~~~~~V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~--------------------------------- 59 (296)
T 3ddj_A 14 NLYFQGMNIETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-E--------------------------------- 59 (296)
T ss_dssp CCTTCCSSGGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-S---------------------------------
T ss_pred hhhhcccCHHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-C---------------------------------
Confidence 345667899999999999999999999999999999999999998 4
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhh----------------hccC------CCCCCccch---hhhhhhcccccc
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKI----------------YKEN------QNWPDDQLS---SEIFHAEYRCRP 341 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~----------------~~~~------~~~p~~~~~---~~~~~~~~~~~~ 341 (482)
+++|++|.+|+...+.... -.+. ...+++.+. ..+.....++.|
T Consensus 60 -----------~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lp 128 (296)
T 3ddj_A 60 -----------KIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLP 128 (296)
T ss_dssp -----------SEEEEEEHHHHHGGGTTCC---CCHHHHHHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEE
T ss_pred -----------eEEEEEeHHHHHHHhcccccccccchhhHHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEE
Confidence 7999999999987663110 0000 011222221 124456677889
Q ss_pred ccCCCCccccchhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeee
Q psy15912 342 RIWSPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQ 421 (482)
Q Consensus 342 ~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~ 421 (482)
++++++.++|+++.+|+...+... ....+++++|++++++++
T Consensus 129 Vvd~~~~lvGivt~~dl~~~~~~~--------------------------------------~~~~~v~~~m~~~~~~v~ 170 (296)
T 3ddj_A 129 VVDINDKPVGIVTEREFLLLYKDL--------------------------------------DEIFPVKVFMSTKVQTIY 170 (296)
T ss_dssp EECTTSCEEEEEEHHHHGGGGGGS--------------------------------------CCCCBHHHHSBCSCCCEE
T ss_pred EEcCCCcEEEEEeHHHHHHhhhcc--------------------------------------cccccHHHhhcCCCeEEC
Confidence 998889999999999887443211 011278999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 422 DSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 422 ~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
+++++.++.+.|.+.+.+++||+|++|+++|+||++|++++..
T Consensus 171 ~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 171 KEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 9999999999999999999999999999999999999998755
No 47
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.67 E-value=1.5e-16 Score=153.44 Aligned_cols=60 Identities=20% Similarity=0.237 Sum_probs=50.3
Q ss_pred cccccccccc-cCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 405 FTVKLNLFMN-TSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 405 ~~i~v~~im~-~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
...+++++|+ +++.++++++++.++.++|.+.+++++||+|++|+++|+||++|++++..
T Consensus 183 ~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~~ 243 (245)
T 3l2b_A 183 QSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTHK 243 (245)
T ss_dssp GGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-------
T ss_pred cCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchhh
Confidence 3457999999 89999999999999999999999999999999999999999999998754
No 48
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.66 E-value=2.3e-16 Score=141.62 Aligned_cols=133 Identities=17% Similarity=0.122 Sum_probs=110.1
Q ss_pred CccccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 209 LSSNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 209 ~l~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
.+..++|+|+|.+ ++.++.+++++.++++.|.+++++.+||+|++
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~--------------------------------- 56 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS--------------------------------- 56 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT---------------------------------
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC---------------------------------
Confidence 3557899999998 89999999999999999999999999999975
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhh
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKI 366 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~ 366 (482)
++++|+|+..|+...+.....
T Consensus 57 ----------~~lvGivt~~dl~~~~~~~~~------------------------------------------------- 77 (159)
T 1yav_A 57 ----------YRLHGLIGTNMIMNSIFGLER------------------------------------------------- 77 (159)
T ss_dssp ----------CBEEEEEEHHHHHHHHBCSSS-------------------------------------------------
T ss_pred ----------CCEEEEeEHHHHHHHhhhhcc-------------------------------------------------
Confidence 699999999999876533100
Q ss_pred hccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC
Q psy15912 367 YKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN 446 (482)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~ 446 (482)
+.. . .....+++++|++++.++++++++.++.++|.+.+. +||+|+
T Consensus 78 -----------~~~----~-----------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~ 123 (159)
T 1yav_A 78 -----------IEF----E-----------------KLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND 123 (159)
T ss_dssp -----------BCG----G-----------------GTTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT
T ss_pred -----------cch----h-----------------hhccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC
Confidence 000 0 001237899999999999999999999999998876 999998
Q ss_pred CCeEEEEEeHHHhHHHHHhhc
Q psy15912 447 NNHVVGMITRKDLARYRVWRH 467 (482)
Q Consensus 447 ~g~lvGIITr~DLl~~~~~~~ 467 (482)
+|+++|+||++|++++.....
T Consensus 124 ~g~~vGiit~~dil~~~~~~~ 144 (159)
T 1yav_A 124 EQVFEGIFTRRVVLKELNKHI 144 (159)
T ss_dssp TCBEEEEEEHHHHHHHHHHHC
T ss_pred CCeEEEEEEHHHHHHHHHHHH
Confidence 999999999999999865443
No 49
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.66 E-value=6.9e-16 Score=135.31 Aligned_cols=126 Identities=18% Similarity=0.326 Sum_probs=105.7
Q ss_pred cccchhh---cccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCC
Q psy15912 211 SNITARI---VKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHK 287 (482)
Q Consensus 211 ~~l~a~d---vM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (482)
...+++| +|.+++.++.+++++.++++.|.+++++.+||+|++
T Consensus 6 ~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---------------------------------- 51 (144)
T 2nyc_A 6 LKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN---------------------------------- 51 (144)
T ss_dssp GGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT----------------------------------
T ss_pred hhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCC----------------------------------
Confidence 3457888 888999999999999999999999999999999975
Q ss_pred CCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhh
Q psy15912 288 GDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIY 367 (482)
Q Consensus 288 ~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~ 367 (482)
++++|+|+.+|+...+.....
T Consensus 52 ---------~~~~Givt~~dl~~~~~~~~~-------------------------------------------------- 72 (144)
T 2nyc_A 52 ---------GYLINVYEAYDVLGLIKGGIY-------------------------------------------------- 72 (144)
T ss_dssp ---------CBEEEEEEHHHHHHHHHTC----------------------------------------------------
T ss_pred ---------CcEEEEEcHHHHHHHhccccc--------------------------------------------------
Confidence 689999999999876543200
Q ss_pred ccCCCCCCCCCChhhhhhhCCCCCCCCccccCcccccccccccccccc------CceeeeCCCCHHHHHHHHHHcCCCEE
Q psy15912 368 KENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNT------SPFSVQDSTSLPRVFKLFRALGLRHV 441 (482)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~------~p~~V~~~~~l~~a~~~f~~~~lr~l 441 (482)
.....+++++|.+ ++.++++++++.++++.|.+.+.+++
T Consensus 73 -----------------------------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l 117 (144)
T 2nyc_A 73 -----------------------------------NDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRF 117 (144)
T ss_dssp -------------------------------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEE
T ss_pred -----------------------------------ccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEE
Confidence 0011267888876 67899999999999999999999999
Q ss_pred EEECCCCeEEEEEeHHHhHHHHH
Q psy15912 442 VVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 442 pVVD~~g~lvGIITr~DLl~~~~ 464 (482)
||+|++|+++|+||++|++++..
T Consensus 118 ~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 118 FVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp EEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEECCCCCEEEEEEHHHHHHHHH
Confidence 99998899999999999998764
No 50
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.66 E-value=1.2e-15 Score=153.21 Aligned_cols=183 Identities=13% Similarity=0.150 Sum_probs=137.1
Q ss_pred ccccchhhcc--cCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCC
Q psy15912 210 SSNITARIVK--SHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHK 287 (482)
Q Consensus 210 l~~l~a~dvM--~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (482)
+...+++|+| .++++++.+++++.++++.|.+++++.+||+|++
T Consensus 32 l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~---------------------------------- 77 (330)
T 2v8q_E 32 MKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSK---------------------------------- 77 (330)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETT----------------------------------
T ss_pred HHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCC----------------------------------
Confidence 4567999999 7799999999999999999999999999999975
Q ss_pred CCCCCCCCCCeEEEEEeHHHHHHHHHhhh-hc-------------------------cC-CCCCCccchh---hhhhhcc
Q psy15912 288 GDASRKESPGRLVGLILRSQLIILIKHKI-YK-------------------------EN-QNWPDDQLSS---EIFHAEY 337 (482)
Q Consensus 288 ~~~~~~~~~g~lvGiIs~~dL~~~l~~~~-~~-------------------------~~-~~~p~~~~~~---~~~~~~~ 337 (482)
.++++|+++.+|++..+.... .. .. ...+++.+.. .+.....
T Consensus 78 --------~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~ 149 (330)
T 2v8q_E 78 --------KQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKI 149 (330)
T ss_dssp --------TTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTC
T ss_pred --------CCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCC
Confidence 258999999999987664321 00 00 0112222221 2345566
Q ss_pred ccccccCC-CCccccchhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccc--cc
Q psy15912 338 RCRPRIWS-PGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLF--MN 414 (482)
Q Consensus 338 ~~~~~~~~-~~~~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~i--m~ 414 (482)
++.|++++ ++.++|+++.+|+.+.+....... . ..+ .....++++ |+
T Consensus 150 ~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~--~--------------------~~~--------~~~~~v~~~~v~~ 199 (330)
T 2v8q_E 150 HRLPVIDPESGNTLYILTHKRILKFLKLFITEF--P--------------------KPE--------FMSKSLEELQIGT 199 (330)
T ss_dssp SCEEEECTTTCCEEEEECHHHHHHHHHHHSCSS--S--------------------CCG--------GGGSBHHHHTCSB
T ss_pred CeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhcc--C--------------------chh--------hhcCCHHHhcccC
Confidence 77888887 899999999999987664321100 0 000 011134444 65
Q ss_pred -cCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 415 -TSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 415 -~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
++++++++++++.++.+.|.+.+.+++||+|++|+++|+||++|++++..
T Consensus 200 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 200 YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGG
T ss_pred cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHh
Confidence 78899999999999999999999999999998999999999999998654
No 51
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.65 E-value=1.7e-16 Score=155.24 Aligned_cols=169 Identities=18% Similarity=0.282 Sum_probs=118.1
Q ss_pred cchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCC
Q psy15912 213 ITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASR 292 (482)
Q Consensus 213 l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (482)
++|+|+|+++++++.+++++.++++.|.+++++.+||+|++
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~--------------------------------------- 41 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKE--------------------------------------- 41 (282)
T ss_dssp CBHHHHSEESCCCEESSCC------------CCEEEEECTT---------------------------------------
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC---------------------------------------
Confidence 47999999999999999999999999999999999999864
Q ss_pred CCCCCeEEEEEeHHHHHHHHHhhhhccCC------CCCCccchh---hhhhhccccccccCCCCccccchhhHHHHH-HH
Q psy15912 293 KESPGRLVGLILRSQLIILIKHKIYKENQ------NWPDDQLSS---EIFHAEYRCRPRIWSPGRLVGLILRSQLII-LI 362 (482)
Q Consensus 293 ~~~~g~lvGiIs~~dL~~~l~~~~~~~~~------~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~-~~ 362 (482)
++++|+++.+|++..+......+.. ..+++.+.. .+.....++.|++++++.++|+++.+|+.+ .+
T Consensus 42 ----~~~~Giv~~~dl~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~ 117 (282)
T 2yzq_A 42 ----GKLVGIISVKRILVNPDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYF 117 (282)
T ss_dssp ----CCEEEEEESSCC----------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTT
T ss_pred ----CcEEEEEEHHHHHhhhccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 6899999999998665332111111 112222222 234556677888888899999999999985 44
Q ss_pred HhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEE
Q psy15912 363 KHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVV 442 (482)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lp 442 (482)
.... .....+++++|+++++++++++++.++.+.|.+.+.+++|
T Consensus 118 ~~~~------------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~ 161 (282)
T 2yzq_A 118 AKSE------------------------------------KYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALP 161 (282)
T ss_dssp TTCS------------------------------------GGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEE
T ss_pred hccC------------------------------------CcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEE
Confidence 3210 0012368899999999999999999999999999999999
Q ss_pred EECCCCeEEEEEeHHHhH
Q psy15912 443 VVNNNNHVVGMITRKDLA 460 (482)
Q Consensus 443 VVD~~g~lvGIITr~DLl 460 (482)
|+|++|+++|+||++|++
T Consensus 162 Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 162 VVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp EECTTSCEEEEEEGGGGG
T ss_pred EEcCCCeEEEEEEHHHHh
Confidence 999889999999999999
No 52
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.65 E-value=7.6e-16 Score=150.06 Aligned_cols=168 Identities=16% Similarity=0.296 Sum_probs=131.7
Q ss_pred hhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCCCC
Q psy15912 216 RIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRKES 295 (482)
Q Consensus 216 ~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (482)
.++|+++++++.+++++.+++++|.+++++.+||+|++
T Consensus 7 ~~i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~------------------------------------------ 44 (280)
T 3kh5_A 7 KIAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAG------------------------------------------ 44 (280)
T ss_dssp GTSCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTT------------------------------------------
T ss_pred HHhcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECC------------------------------------------
Confidence 45677899999999999999999999999999999973
Q ss_pred CCeEEEEEeHHHHHHHHHhhhh--------------------ccCCC------CCCccch---hhhhhhccccccccCCC
Q psy15912 296 PGRLVGLILRSQLIILIKHKIY--------------------KENQN------WPDDQLS---SEIFHAEYRCRPRIWSP 346 (482)
Q Consensus 296 ~g~lvGiIs~~dL~~~l~~~~~--------------------~~~~~------~p~~~~~---~~~~~~~~~~~~~~~~~ 346 (482)
+++++|++|.+|+...+..... .+... .+++.+. ..+.....++.|+++++
T Consensus 45 ~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~ 124 (280)
T 3kh5_A 45 NNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDE 124 (280)
T ss_dssp TCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTT
T ss_pred CCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCC
Confidence 2699999999999987632100 00000 1122111 12334556778899889
Q ss_pred CccccchhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCH
Q psy15912 347 GRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSL 426 (482)
Q Consensus 347 ~~~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l 426 (482)
+.++|+++.+|+.+.+..... ...+++++|+++++++++++++
T Consensus 125 ~~~~Givt~~dl~~~~~~~~~-------------------------------------~~~~v~~~m~~~~~~v~~~~~l 167 (280)
T 3kh5_A 125 NQLISLITERDVIRALLDKID-------------------------------------ENEVIDDYITRDVIVATPGERL 167 (280)
T ss_dssp CBEEEEEEHHHHHHHHGGGSC-------------------------------------TTCBSGGGCBCSCCCBCTTCBH
T ss_pred CEEEEEEEHHHHHHHHhhcCC-------------------------------------CCCCHHHHhCCCCeEECCCCcH
Confidence 999999999999876543211 1126889999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHH
Q psy15912 427 PRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYR 463 (482)
Q Consensus 427 ~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~ 463 (482)
.++.+.|.+.+.+++||+ ++|+++|+||++|++++.
T Consensus 168 ~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~ 203 (280)
T 3kh5_A 168 KDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLL 203 (280)
T ss_dssp HHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHH
Confidence 999999999999999999 689999999999999875
No 53
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.65 E-value=7.8e-16 Score=137.70 Aligned_cols=127 Identities=15% Similarity=0.226 Sum_probs=107.9
Q ss_pred ccchhhccc------CCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCC
Q psy15912 212 NITARIVKS------HPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSS 285 (482)
Q Consensus 212 ~l~a~dvM~------~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (482)
..+|+|+|. +++.++.+++++.++++.|.+++++.+||+| +
T Consensus 6 ~~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~-------------------------------- 52 (157)
T 4fry_A 6 STTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-G-------------------------------- 52 (157)
T ss_dssp -CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-S--------------------------------
T ss_pred HHHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-C--------------------------------
Confidence 357999998 6679999999999999999999999999965 3
Q ss_pred CCCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhh
Q psy15912 286 HKGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHK 365 (482)
Q Consensus 286 ~~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~ 365 (482)
++++|+|+..|+.+.+.....
T Consensus 53 -----------~~~~Givt~~dl~~~~~~~~~------------------------------------------------ 73 (157)
T 4fry_A 53 -----------DDIAGIVTERDYARKVVLQER------------------------------------------------ 73 (157)
T ss_dssp -----------SSEEEEEEHHHHHHHSGGGTC------------------------------------------------
T ss_pred -----------CEEEEEEEHHHHHHHHHhccC------------------------------------------------
Confidence 589999999999876543210
Q ss_pred hhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEEC
Q psy15912 366 IYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVN 445 (482)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD 445 (482)
.....+++++|+++++++++++++.+++++|.+.+.+++||+|
T Consensus 74 -------------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 116 (157)
T 4fry_A 74 -------------------------------------SSKATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD 116 (157)
T ss_dssp -------------------------------------CSSSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred -------------------------------------CccccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 0012378999999999999999999999999999999999998
Q ss_pred CCCeEEEEEeHHHhHHHHHhhcc
Q psy15912 446 NNNHVVGMITRKDLARYRVWRHG 468 (482)
Q Consensus 446 ~~g~lvGIITr~DLl~~~~~~~~ 468 (482)
+|+++|+||++|++++......
T Consensus 117 -~g~~~Giit~~dil~~l~~~~~ 138 (157)
T 4fry_A 117 -GGKLIGLISIGDLVKSVIADQQ 138 (157)
T ss_dssp -TTEEEEEEEHHHHHHHHHTTCC
T ss_pred -CCEEEEEEEHHHHHHHHHHHHH
Confidence 7999999999999998765543
No 54
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.65 E-value=3.9e-16 Score=139.17 Aligned_cols=127 Identities=17% Similarity=0.270 Sum_probs=107.5
Q ss_pred CCCccccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 207 PPLSSNITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 207 ~~~l~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
...+..++++|+ +++.++.+++++.++++.|.+++++.+||+|++
T Consensus 17 ~~~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--------------------------------- 61 (152)
T 2uv4_A 17 SKSLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK--------------------------------- 61 (152)
T ss_dssp TSBHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT---------------------------------
T ss_pred HhhHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCC---------------------------------
Confidence 456778899998 788999999999999999999999999999975
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhh
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKI 366 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~ 366 (482)
|+++|+|+.+|+...+.....
T Consensus 62 ----------~~~vGivt~~dl~~~~~~~~~------------------------------------------------- 82 (152)
T 2uv4_A 62 ----------GRVVDIYSKFDVINLAAEKTY------------------------------------------------- 82 (152)
T ss_dssp ----------SBEEEEEEHHHHHHHHHCSSC-------------------------------------------------
T ss_pred ----------CcEEEEEeHHHHHHHhcchhh-------------------------------------------------
Confidence 699999999999876543200
Q ss_pred hccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccc------cCceeeeCCCCHHHHHHHHHHcCCCE
Q psy15912 367 YKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMN------TSPFSVQDSTSLPRVFKLFRALGLRH 440 (482)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~------~~p~~V~~~~~l~~a~~~f~~~~lr~ 440 (482)
. ....+++++|. ++++++++++++.++.++|.+.+.++
T Consensus 83 ---------------------~---------------~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~ 126 (152)
T 2uv4_A 83 ---------------------N---------------NLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHR 126 (152)
T ss_dssp ---------------------C---------------CTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSE
T ss_pred ---------------------h---------------hhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeE
Confidence 0 00125666775 78899999999999999999999999
Q ss_pred EEEECCCCeEEEEEeHHHhHHHH
Q psy15912 441 VVVVNNNNHVVGMITRKDLARYR 463 (482)
Q Consensus 441 lpVVD~~g~lvGIITr~DLl~~~ 463 (482)
+||+|++|+++|+||++|++++.
T Consensus 127 lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 127 LVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp EEEECTTSBEEEEEEHHHHHHHH
T ss_pred EEEECCCCeEEEEEEHHHHHHHH
Confidence 99999889999999999999864
No 55
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.64 E-value=5.7e-16 Score=146.69 Aligned_cols=120 Identities=14% Similarity=0.174 Sum_probs=106.1
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
..+++++|.++++++.++.++.+++++|.+++++.+||+|++
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-------------------------------------- 53 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDRE-------------------------------------- 53 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTT--------------------------------------
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC--------------------------------------
Confidence 457999999999999999999999999999999999999865
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCC
Q psy15912 292 RKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQ 371 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~ 371 (482)
++++|+|+.+|+.....
T Consensus 54 -----~~l~Givt~~dl~~~~~---------------------------------------------------------- 70 (213)
T 1vr9_A 54 -----GHFRGVVNKEDLLDLDL---------------------------------------------------------- 70 (213)
T ss_dssp -----SBEEEEEEGGGGTTSCT----------------------------------------------------------
T ss_pred -----CEEEEEEEHHHHHhhcC----------------------------------------------------------
Confidence 68999999988642110
Q ss_pred CCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEE
Q psy15912 372 NWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVV 451 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lv 451 (482)
..+++++|+++++++++++++.++.++|.+.+.+++||+|++|+++
T Consensus 71 ----------------------------------~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lv 116 (213)
T 1vr9_A 71 ----------------------------------DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLK 116 (213)
T ss_dssp ----------------------------------TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEE
T ss_pred ----------------------------------CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEE
Confidence 1168999999999999999999999999999999999999889999
Q ss_pred EEEeHHHhHHHHHhh
Q psy15912 452 GMITRKDLARYRVWR 466 (482)
Q Consensus 452 GIITr~DLl~~~~~~ 466 (482)
|+||++|+++.....
T Consensus 117 Giit~~Dil~~~~~~ 131 (213)
T 1vr9_A 117 GAVSLHDFLEALIEA 131 (213)
T ss_dssp EEEEHHHHHHHHHHS
T ss_pred EEEEHHHHHHHHHHH
Confidence 999999999876543
No 56
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.63 E-value=1.9e-15 Score=151.71 Aligned_cols=179 Identities=13% Similarity=0.283 Sum_probs=133.7
Q ss_pred hhcccCCe--eEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCC
Q psy15912 216 RIVKSHPV--ICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRK 293 (482)
Q Consensus 216 ~dvM~~~~--~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (482)
+++|.+++ +++.+++++.++++.|.+++++.+||+|++++
T Consensus 110 ~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~-------------------------------------- 151 (334)
T 2qrd_G 110 RKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGE-------------------------------------- 151 (334)
T ss_dssp HHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETT--------------------------------------
T ss_pred HhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCC--------------------------------------
Confidence 35677777 99999999999999999999999999987510
Q ss_pred CCCCeEEEEEeHHHHHHHHHhhhh---------ccC---C------CCCCccchh---hhhhhccccccccCCCCccccc
Q psy15912 294 ESPGRLVGLILRSQLIILIKHKIY---------KEN---Q------NWPDDQLSS---EIFHAEYRCRPRIWSPGRLVGL 352 (482)
Q Consensus 294 ~~~g~lvGiIs~~dL~~~l~~~~~---------~~~---~------~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~G~ 352 (482)
.+++.++|+++.+|+.+.+..... .+- . ..+++.+.. .+.....++.|+++++|.++|+
T Consensus 152 ~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Gi 231 (334)
T 2qrd_G 152 TGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNV 231 (334)
T ss_dssp TTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEE
T ss_pred cCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEE
Confidence 000239999999999987753210 010 0 012222221 2334556778888888999999
Q ss_pred hhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCcccccccccccccccc------CceeeeCCCCH
Q psy15912 353 ILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNT------SPFSVQDSTSL 426 (482)
Q Consensus 353 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~------~p~~V~~~~~l 426 (482)
++.+|+.+.+....+.. ...+++++|++ +++++++++++
T Consensus 232 it~~dl~~~~~~~~~~~-----------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l 276 (334)
T 2qrd_G 232 YESVDVMHLIQDGDYSN-----------------------------------LDLSVGEALLKRPANFDGVHTCRATDRL 276 (334)
T ss_dssp EETHHHHHHHTTSCGGG-----------------------------------GGSBHHHHHTTCCTTCCCCCEECTTCBH
T ss_pred EEHHHHHHHhhcccccc-----------------------------------ccCcHHHHHhcccccCCCCEEECCCCcH
Confidence 99999987664321110 12368889984 88999999999
Q ss_pred HHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHHhhc
Q psy15912 427 PRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRVWRH 467 (482)
Q Consensus 427 ~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~~~~ 467 (482)
.++.+.|.+.+.+++||||++|+++|+||++|++++.....
T Consensus 277 ~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 277 DGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp HHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhcc
Confidence 99999999999999999998899999999999999865443
No 57
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.63 E-value=2.2e-15 Score=161.60 Aligned_cols=152 Identities=15% Similarity=0.174 Sum_probs=125.9
Q ss_pred cCCChhHHHHHHcCCCCCCCCCCCCccccchhhcccCCeeEecCC-CCHHHHHHHHHhCCCCeeeEec-CCCCCCCCCCC
Q psy15912 185 FTEGLYDIHIQLSGIPLLAWDPPPLSSNITARIVKSHPVICLRPL-ETVGNIIDVLKATSHNGFPIVD-VEPMTKHSSDG 262 (482)
Q Consensus 185 ~~~siy~~~L~~~g~p~l~~~~~~~l~~l~a~dvM~~~~~~l~~~-~~i~~~~~~l~~~~~~~fPVVd-~~~~~~~~~~~ 262 (482)
+....++.++..+++..........+...+|+|+|+++++++.++ +++.++++.|++++++.+||+| ++
T Consensus 356 ls~~~~~~~l~~rg~~~~~~~~~~~l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~--------- 426 (527)
T 3pc3_A 356 MTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDD--------- 426 (527)
T ss_dssp TTTTTSHHHHHHTTSSCCCCTTCCTTTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT---------
T ss_pred HhhhhcHHHHHhcCCccccccccccccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC---------
Confidence 334456788888887665544455688899999999999999999 9999999999999999999999 43
Q ss_pred ccccCCCCCCCCCCCCccccCCCCCCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccc
Q psy15912 263 AEQSSAGSTDSHKGDTSHKRDSSHKGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPR 342 (482)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 342 (482)
++++|+|+.+||++.+....
T Consensus 427 ----------------------------------g~lvGiVt~~Dll~~l~~~~-------------------------- 446 (527)
T 3pc3_A 427 ----------------------------------GSVLGVVGQETLITQIVSMN-------------------------- 446 (527)
T ss_dssp ----------------------------------CCEEEEEEHHHHHHHHHHHC--------------------------
T ss_pred ----------------------------------CEEEEEEEHHHHHHHHHhcc--------------------------
Confidence 68999999999987765431
Q ss_pred cCCCCccccchhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeC
Q psy15912 343 IWSPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQD 422 (482)
Q Consensus 343 ~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~ 422 (482)
.....+|+++|+++++++++
T Consensus 447 ------------------------------------------------------------~~~~~~V~~im~~~~~~v~~ 466 (527)
T 3pc3_A 447 ------------------------------------------------------------RQQSDPAIKALNKRVIRLNE 466 (527)
T ss_dssp ------------------------------------------------------------CCTTSBGGGGEETTCCEEET
T ss_pred ------------------------------------------------------------CcCCCcHHHHhcCCCeEECC
Confidence 00123799999999999999
Q ss_pred CCCHHHHHHHHHHcCCCEEEEECCC----CeEEEEEeHHHhHHHHHhhc
Q psy15912 423 STSLPRVFKLFRALGLRHVVVVNNN----NHVVGMITRKDLARYRVWRH 467 (482)
Q Consensus 423 ~~~l~~a~~~f~~~~lr~lpVVD~~----g~lvGIITr~DLl~~~~~~~ 467 (482)
++++.++.++|.+.++ +||||++ |+++||||++||+++...+.
T Consensus 467 ~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 467 SEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp TSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred CCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 9999999999976654 7999974 89999999999999876543
No 58
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.62 E-value=1e-15 Score=151.60 Aligned_cols=121 Identities=22% Similarity=0.233 Sum_probs=107.2
Q ss_pred cccchhhcccCCeeEecCCCCHHHHHHHHHhC-----CCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCC
Q psy15912 211 SNITARIVKSHPVICLRPLETVGNIIDVLKAT-----SHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSS 285 (482)
Q Consensus 211 ~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~-----~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (482)
...+|+++|++++++++++.++.++++.|+++ +++.+||+|++
T Consensus 135 ~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~-------------------------------- 182 (286)
T 2oux_A 135 EDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE-------------------------------- 182 (286)
T ss_dssp CTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT--------------------------------
T ss_pred ChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC--------------------------------
Confidence 35789999999999999999999999999987 77889999975
Q ss_pred CCCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhh
Q psy15912 286 HKGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHK 365 (482)
Q Consensus 286 ~~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~ 365 (482)
++++|+|+.+|++...
T Consensus 183 -----------~~lvGivt~~dll~~~----------------------------------------------------- 198 (286)
T 2oux_A 183 -----------NHLVGVISLRDLIVND----------------------------------------------------- 198 (286)
T ss_dssp -----------CBEEEEEEHHHHTTSC-----------------------------------------------------
T ss_pred -----------CeEEEEEEHHHHHcCC-----------------------------------------------------
Confidence 6999999999974210
Q ss_pred hhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEEC
Q psy15912 366 IYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVN 445 (482)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD 445 (482)
...+++++|++++++|++++++.+|.++|.+.+++++||||
T Consensus 199 ---------------------------------------~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 239 (286)
T 2oux_A 199 ---------------------------------------DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD 239 (286)
T ss_dssp ---------------------------------------TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred ---------------------------------------CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 01278999999999999999999999999999999999999
Q ss_pred CCCeEEEEEeHHHhHHHHHhh
Q psy15912 446 NNNHVVGMITRKDLARYRVWR 466 (482)
Q Consensus 446 ~~g~lvGIITr~DLl~~~~~~ 466 (482)
++|+++||||+.|+++.....
T Consensus 240 ~~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 240 YDDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp TTCBEEEEEEHHHHHHHHHHH
T ss_pred CCCeEEEEEEHHHHHHHHHHH
Confidence 999999999999999875543
No 59
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.62 E-value=3.5e-15 Score=149.11 Aligned_cols=180 Identities=15% Similarity=0.181 Sum_probs=138.2
Q ss_pred ccccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCC
Q psy15912 210 SSNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHK 287 (482)
Q Consensus 210 l~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (482)
+...++.|+|.+ +++++..+.++.++++.|.++++..+||+|++
T Consensus 27 l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~---------------------------------- 72 (323)
T 3t4n_C 27 LNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSK---------------------------------- 72 (323)
T ss_dssp HHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETT----------------------------------
T ss_pred HHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCC----------------------------------
Confidence 356789999986 67899999999999999999999999999976
Q ss_pred CCCCCCCCCCeEEEEEeHHHHHHHHHhhhh---------------------------cc-CCCCCCccchh---hhhhhc
Q psy15912 288 GDASRKESPGRLVGLILRSQLIILIKHKIY---------------------------KE-NQNWPDDQLSS---EIFHAE 336 (482)
Q Consensus 288 ~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~---------------------------~~-~~~~p~~~~~~---~~~~~~ 336 (482)
.++++|+++.+|++..+..... .+ ....+++.+.. .+....
T Consensus 73 --------~~~lvGilt~~Dl~~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~ 144 (323)
T 3t4n_C 73 --------TSRFAGLLTTTDFINVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESR 144 (323)
T ss_dssp --------TTEEEEEECHHHHHHHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHT
T ss_pred --------CCeEEEEEEHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCC
Confidence 2599999999999886632100 00 01123333322 234556
Q ss_pred cccccccCCCCc-----cccchhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCcccccccccccc
Q psy15912 337 YRCRPRIWSPGR-----LVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNL 411 (482)
Q Consensus 337 ~~~~~~~~~~~~-----~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~ 411 (482)
.++.|++++++. ++|+++.+++.+.+....-.. .....++++
T Consensus 145 ~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~---------------------------------~~~~~~v~~ 191 (323)
T 3t4n_C 145 SGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRET---------------------------------HFLKIPIGD 191 (323)
T ss_dssp CSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGG---------------------------------GGCCSBGGG
T ss_pred eeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCch---------------------------------hhhhCcHHH
Confidence 677888877765 999999999987764321110 001126778
Q ss_pred c---cccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 412 F---MNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 412 i---m~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
+ |.++++++++++++.++.+.|.+.+.+++||+|++|+++|+||++|++++..
T Consensus 192 ~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 192 LNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp TTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHH
T ss_pred cCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHh
Confidence 8 9999999999999999999999999999999999999999999999998754
No 60
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.61 E-value=6.1e-15 Score=148.05 Aligned_cols=180 Identities=17% Similarity=0.171 Sum_probs=134.9
Q ss_pred ccccchhhcccC--CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCC
Q psy15912 210 SSNITARIVKSH--PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHK 287 (482)
Q Consensus 210 l~~l~a~dvM~~--~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (482)
+...+|+|+|++ +++++++++++.++++.|.+++++.+||+|++
T Consensus 19 l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~---------------------------------- 64 (334)
T 2qrd_G 19 IRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSE---------------------------------- 64 (334)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETT----------------------------------
T ss_pred HhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCC----------------------------------
Confidence 445899999976 58899999999999999999999999999875
Q ss_pred CCCCCCCCCCeEEEEEeHHHHHHHHHhhhh----c-----------------------cC----CCCCCccchh---hhh
Q psy15912 288 GDASRKESPGRLVGLILRSQLIILIKHKIY----K-----------------------EN----QNWPDDQLSS---EIF 333 (482)
Q Consensus 288 ~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~----~-----------------------~~----~~~p~~~~~~---~~~ 333 (482)
.++++|+|+.+|++..+..... . .. ...++..+.. .+.
T Consensus 65 --------~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~ 136 (334)
T 2qrd_G 65 --------ANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMS 136 (334)
T ss_dssp --------TTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHH
T ss_pred --------CCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHH
Confidence 2699999999999876632100 0 00 0012222211 233
Q ss_pred hhccccccccCCCCc-----cccchhhHHHHHHHHhhhhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccc
Q psy15912 334 HAEYRCRPRIWSPGR-----LVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVK 408 (482)
Q Consensus 334 ~~~~~~~~~~~~~~~-----~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 408 (482)
....++.|++++.+. ++|+++.+|+.+.+........ ....+
T Consensus 137 ~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~---------------------------------~~~~~ 183 (334)
T 2qrd_G 137 KSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETA---------------------------------MLRVP 183 (334)
T ss_dssp HSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGGG---------------------------------GCCCB
T ss_pred HCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccchh---------------------------------hhhCc
Confidence 455677788876544 9999999999877654211000 00125
Q ss_pred ccc---ccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 409 LNL---FMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 409 v~~---im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
+++ +|.++++++++++++.++.+.|.+.+.+++||+|++|+++|+||++|++++..
T Consensus 184 v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 184 LNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp GGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHT
T ss_pred HHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhh
Confidence 666 59999999999999999999999999999999998899999999999998653
No 61
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.61 E-value=3.1e-15 Score=147.38 Aligned_cols=119 Identities=21% Similarity=0.263 Sum_probs=105.0
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhC-----CCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKAT-----SHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSH 286 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~-----~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (482)
..+|+++|++++++++++.++.++++.|+++ ++..+||+|++
T Consensus 134 ~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~--------------------------------- 180 (278)
T 2yvy_A 134 EDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK--------------------------------- 180 (278)
T ss_dssp TTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT---------------------------------
T ss_pred cchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC---------------------------------
Confidence 4689999999999999999999999999987 67999999975
Q ss_pred CCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhh
Q psy15912 287 KGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKI 366 (482)
Q Consensus 287 ~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~ 366 (482)
++++|+|+.+|++.. .
T Consensus 181 ----------~~lvGivt~~dll~~---~--------------------------------------------------- 196 (278)
T 2yvy_A 181 ----------GRLKGVLSLRDLIVA---D--------------------------------------------------- 196 (278)
T ss_dssp ----------CBEEEEEEHHHHHHS---C---------------------------------------------------
T ss_pred ----------CCEEEEEEHHHHhcC---C---------------------------------------------------
Confidence 689999999998532 0
Q ss_pred hccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC
Q psy15912 367 YKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN 446 (482)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~ 446 (482)
...+++++|++++++|++++++.++.++|++.+.+++||||+
T Consensus 197 --------------------------------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 238 (278)
T 2yvy_A 197 --------------------------------------PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 238 (278)
T ss_dssp --------------------------------------TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred --------------------------------------CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC
Confidence 012789999999999999999999999999999999999999
Q ss_pred CCeEEEEEeHHHhHHHHHh
Q psy15912 447 NNHVVGMITRKDLARYRVW 465 (482)
Q Consensus 447 ~g~lvGIITr~DLl~~~~~ 465 (482)
+|+++||||+.|+++....
T Consensus 239 ~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 239 EGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp TSBEEEEEEHHHHHHHC--
T ss_pred CCeEEEEEEHHHHHHHHHH
Confidence 9999999999999987543
No 62
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.54 E-value=1.9e-14 Score=152.15 Aligned_cols=121 Identities=21% Similarity=0.260 Sum_probs=106.9
Q ss_pred cccchhhcccCCeeEecCCCCHHHHHHHHHhC-----CCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCC
Q psy15912 211 SNITARIVKSHPVICLRPLETVGNIIDVLKAT-----SHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSS 285 (482)
Q Consensus 211 ~~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~-----~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (482)
...+|+++|++++++++++.++.++++.++++ +++.+||+|++
T Consensus 153 ~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~-------------------------------- 200 (473)
T 2zy9_A 153 EEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-------------------------------- 200 (473)
T ss_dssp CTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT--------------------------------
T ss_pred CCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC--------------------------------
Confidence 35689999999999999999999999999986 46899999975
Q ss_pred CCCCCCCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhh
Q psy15912 286 HKGDASRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHK 365 (482)
Q Consensus 286 ~~~~~~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~ 365 (482)
++++|+|+.+|++.. .
T Consensus 201 -----------~~lvGiVt~~Dll~~---~-------------------------------------------------- 216 (473)
T 2zy9_A 201 -----------GRLKGVLSLRDLIVA---D-------------------------------------------------- 216 (473)
T ss_dssp -----------SBEEEEEEHHHHHHS---C--------------------------------------------------
T ss_pred -----------CcEEEEEEHHHHhcC---C--------------------------------------------------
Confidence 689999999998531 0
Q ss_pred hhccCCCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEEC
Q psy15912 366 IYKENQNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVN 445 (482)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD 445 (482)
...+++++|++++++++++++++++.+.|++.+++.+||||
T Consensus 217 ---------------------------------------~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD 257 (473)
T 2zy9_A 217 ---------------------------------------PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 257 (473)
T ss_dssp ---------------------------------------TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC
T ss_pred ---------------------------------------CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc
Confidence 01279999999999999999999999999999999999999
Q ss_pred CCCeEEEEEeHHHhHHHHHhh
Q psy15912 446 NNNHVVGMITRKDLARYRVWR 466 (482)
Q Consensus 446 ~~g~lvGIITr~DLl~~~~~~ 466 (482)
++|+++|+||++|+++.....
T Consensus 258 e~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 258 EEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp TTSBEEEEEEHHHHHHHHHHH
T ss_pred CCCEEEEEEehHhhHHHHHHH
Confidence 999999999999999886544
No 63
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.46 E-value=1.2e-13 Score=147.28 Aligned_cols=120 Identities=19% Similarity=0.303 Sum_probs=104.7
Q ss_pred chhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCC
Q psy15912 214 TARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRK 293 (482)
Q Consensus 214 ~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (482)
+++++|.++++++.+++++.+++++|.+++++.+||+|++.
T Consensus 114 ~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~--------------------------------------- 154 (511)
T 3usb_A 114 RSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLD--------------------------------------- 154 (511)
T ss_dssp TSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTT---------------------------------------
T ss_pred ccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCC---------------------------------------
Confidence 45677888999999999999999999999999999999720
Q ss_pred CCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCCC
Q psy15912 294 ESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQNW 373 (482)
Q Consensus 294 ~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~~ 373 (482)
+++++|+|+.+|+.. ..
T Consensus 155 --~~~lvGiVt~rDl~~---~~---------------------------------------------------------- 171 (511)
T 3usb_A 155 --ERKLVGIITNRDMRF---IQ---------------------------------------------------------- 171 (511)
T ss_dssp --TCBEEEEEEHHHHTT---CC----------------------------------------------------------
T ss_pred --CCEEEEEEEehHhhh---hc----------------------------------------------------------
Confidence 169999999999742 00
Q ss_pred CCCCCChhhhhhhCCCCCCCCccccCcccccccccccccccc-CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEE
Q psy15912 374 PDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNT-SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVG 452 (482)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~-~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvG 452 (482)
....+++++|++ +++++++++++.++.++|.+.+.+.+||||++|+++|
T Consensus 172 ------------------------------~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~G 221 (511)
T 3usb_A 172 ------------------------------DYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQG 221 (511)
T ss_dssp ------------------------------CSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred ------------------------------cCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEee
Confidence 012378999998 9999999999999999999999999999999999999
Q ss_pred EEeHHHhHHHHHh
Q psy15912 453 MITRKDLARYRVW 465 (482)
Q Consensus 453 IITr~DLl~~~~~ 465 (482)
+||++|+++...+
T Consensus 222 iIT~~Dil~~~~~ 234 (511)
T 3usb_A 222 LITIKDIEKVIEF 234 (511)
T ss_dssp EEEHHHHHHHHHC
T ss_pred eccHHHHHHhhhc
Confidence 9999999998765
No 64
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.41 E-value=3.2e-14 Score=151.08 Aligned_cols=120 Identities=20% Similarity=0.337 Sum_probs=91.4
Q ss_pred chhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCC
Q psy15912 214 TARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRK 293 (482)
Q Consensus 214 ~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (482)
+++++|.++++++.+++++.++++.|++++++.+||+|++
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~---------------------------------------- 129 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTEN---------------------------------------- 129 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSS----------------------------------------
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccC----------------------------------------
Confidence 4578899999999999999999999999999999999975
Q ss_pred CCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCCC
Q psy15912 294 ESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQNW 373 (482)
Q Consensus 294 ~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~~ 373 (482)
++++|+|+.+||... .
T Consensus 130 ---~~lvGiVt~rDL~~~---~---------------------------------------------------------- 145 (496)
T 4fxs_A 130 ---NELVGIITGRDVRFV---T---------------------------------------------------------- 145 (496)
T ss_dssp ---SBEEEEEEHHHHTTC---C----------------------------------------------------------
T ss_pred ---CEEEEEEEHHHHhhc---c----------------------------------------------------------
Confidence 699999999997410 0
Q ss_pred CCCCCChhhhhhhCCCCCCCCccccCccccccccccccccc-c-CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEE
Q psy15912 374 PDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMN-T-SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVV 451 (482)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~-~-~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lv 451 (482)
....+++++|+ + +++++++++++.++.++|.+.+++.+||||++|+++
T Consensus 146 ------------------------------~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~ 195 (496)
T 4fxs_A 146 ------------------------------DLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLK 195 (496)
T ss_dssp ------------------------------CTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCC
T ss_pred ------------------------------cCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEE
Confidence 01137899999 4 589999999999999999999999999999999999
Q ss_pred EEEeHHHhHHHHHhhc
Q psy15912 452 GMITRKDLARYRVWRH 467 (482)
Q Consensus 452 GIITr~DLl~~~~~~~ 467 (482)
|+||++|+++...+..
T Consensus 196 GiIT~~DIl~~~~~p~ 211 (496)
T 4fxs_A 196 GMITAKDFHKAESKPN 211 (496)
T ss_dssp EEECCC-----CCCTT
T ss_pred EeehHhHHHHhhcccc
Confidence 9999999998765443
No 65
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.40 E-value=1.1e-12 Score=139.37 Aligned_cols=118 Identities=18% Similarity=0.318 Sum_probs=104.8
Q ss_pred chhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEec--CCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 214 TARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVD--VEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 214 ~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
+++|+|.++++++++++++.++++.|++++++.+||+| ++
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~-------------------------------------- 132 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLAN-------------------------------------- 132 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT--------------------------------------
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC--------------------------------------
Confidence 46789999999999999999999999999999999998 43
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCC
Q psy15912 292 RKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQ 371 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~ 371 (482)
++++|+|+.+|+.... .
T Consensus 133 -----~~lvGivt~~Dl~~~~--~-------------------------------------------------------- 149 (491)
T 1zfj_A 133 -----RKLVGIITNRDMRFIS--D-------------------------------------------------------- 149 (491)
T ss_dssp -----CBEEEEEEHHHHHHCS--C--------------------------------------------------------
T ss_pred -----CEEEEEEEHHHHhhhc--c--------------------------------------------------------
Confidence 6999999999985320 0
Q ss_pred CCCCCCCChhhhhhhCCCCCCCCccccCcccccccccccccccc-CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeE
Q psy15912 372 NWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNT-SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHV 450 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~-~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~l 450 (482)
...+++++|++ +++++++++++.++.++|.+.+.+++||||++|++
T Consensus 150 ---------------------------------~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~l 196 (491)
T 1zfj_A 150 ---------------------------------YNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRL 196 (491)
T ss_dssp ---------------------------------SSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBE
T ss_pred ---------------------------------CCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcE
Confidence 01278999998 89999999999999999999999999999999999
Q ss_pred EEEEeHHHhHHHHHh
Q psy15912 451 VGMITRKDLARYRVW 465 (482)
Q Consensus 451 vGIITr~DLl~~~~~ 465 (482)
+|+||++|+++...+
T Consensus 197 vGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 197 SGLITIKDIEKVIEF 211 (491)
T ss_dssp EEEEEHHHHHHHHHC
T ss_pred EEEEEHHHHHHHHhc
Confidence 999999999998764
No 66
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.37 E-value=4.8e-14 Score=149.60 Aligned_cols=121 Identities=16% Similarity=0.315 Sum_probs=5.1
Q ss_pred cchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCC
Q psy15912 213 ITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASR 292 (482)
Q Consensus 213 l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (482)
.+++++|.++++++.+++++.+++++|++++++.+||+| +
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~--------------------------------------- 127 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-Q--------------------------------------- 127 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C---------------------------------------
Confidence 356789999999999999999999999999999999999 4
Q ss_pred CCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCC
Q psy15912 293 KESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQN 372 (482)
Q Consensus 293 ~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~ 372 (482)
++++|+|+.+|+.....
T Consensus 128 ----g~lvGIVt~rDl~~~~~----------------------------------------------------------- 144 (490)
T 4avf_A 128 ----GELVGIVTGRDLRVKPN----------------------------------------------------------- 144 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----CEEEEEEEhHHhhhccc-----------------------------------------------------------
Confidence 58999999999742100
Q ss_pred CCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccc-c-CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeE
Q psy15912 373 WPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMN-T-SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHV 450 (482)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~-~-~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~l 450 (482)
...+++++|+ + +++++++++++.++.++|.+.+++.+||||++|++
T Consensus 145 --------------------------------~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~l 192 (490)
T 4avf_A 145 --------------------------------AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYL 192 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcE
Confidence 1127899999 4 69999999999999999999999999999999999
Q ss_pred EEEEeHHHhHHHHHhhcc
Q psy15912 451 VGMITRKDLARYRVWRHG 468 (482)
Q Consensus 451 vGIITr~DLl~~~~~~~~ 468 (482)
+|+||++|+++...+...
T Consensus 193 vGiIT~~Dil~~~~~p~a 210 (490)
T 4avf_A 193 RGLVTFRDIEKAKTYPLA 210 (490)
T ss_dssp --------------CTTC
T ss_pred EEEEehHHhhhhccCcch
Confidence 999999999998665443
No 67
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.35 E-value=8e-14 Score=148.28 Aligned_cols=120 Identities=24% Similarity=0.330 Sum_probs=7.4
Q ss_pred cchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCC
Q psy15912 213 ITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASR 292 (482)
Q Consensus 213 l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (482)
.+++|+|.++++++++++++.++++.|++++++.+||+|++
T Consensus 95 ~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~--------------------------------------- 135 (494)
T 1vrd_A 95 KKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE--------------------------------------- 135 (494)
T ss_dssp HTC-----------------------------------------------------------------------------
T ss_pred hhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCC---------------------------------------
Confidence 35789999999999999999999999999999999999975
Q ss_pred CCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCC
Q psy15912 293 KESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQN 372 (482)
Q Consensus 293 ~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~ 372 (482)
++++|+|+.+|+.... .
T Consensus 136 ----~~lvGivt~~Dl~~~~--~--------------------------------------------------------- 152 (494)
T 1vrd_A 136 ----GRLVGLLTNRDVRFEK--N--------------------------------------------------------- 152 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----CEEEEEEEHHHHHhhc--C---------------------------------------------------------
Confidence 6899999999986410 0
Q ss_pred CCCCCCChhhhhhhCCCCCCCCccccCcccccccccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeE
Q psy15912 373 WPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHV 450 (482)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~l 450 (482)
...+++++|++ +++++++++++.++.++|.+.+++++||||++|++
T Consensus 153 --------------------------------~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~l 200 (494)
T 1vrd_A 153 --------------------------------LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKL 200 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeE
Confidence 01278999998 99999999999999999999999999999999999
Q ss_pred EEEEeHHHhHHHHHhh
Q psy15912 451 VGMITRKDLARYRVWR 466 (482)
Q Consensus 451 vGIITr~DLl~~~~~~ 466 (482)
+|+||++|+++...+.
T Consensus 201 vGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 201 VGLITIKDIMSVIEHP 216 (494)
T ss_dssp --------CHHHHTCT
T ss_pred EEEEEHHHHHhhhccc
Confidence 9999999999986544
No 68
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.33 E-value=1.3e-13 Score=144.10 Aligned_cols=120 Identities=19% Similarity=0.350 Sum_probs=2.4
Q ss_pred hcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCCCCC
Q psy15912 217 IVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRKESP 296 (482)
Q Consensus 217 dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (482)
..|..+++++.|+.++.++++++.+++|.++||+|+.. .+
T Consensus 142 ~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~----------------------------------------~~ 181 (556)
T 4af0_A 142 NGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGE----------------------------------------PD 181 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccC----------------------------------------cC
Confidence 45777899999999999999999999999999999752 13
Q ss_pred CeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCCCCCC
Q psy15912 297 GRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQNWPDD 376 (482)
Q Consensus 297 g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~~~~~ 376 (482)
++|+|+||.+|+... .
T Consensus 182 ~kLvGIvT~RD~rf~--d-------------------------------------------------------------- 197 (556)
T 4af0_A 182 SKLLGIVTGRDVQFQ--D-------------------------------------------------------------- 197 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEEeccccccc--c--------------------------------------------------------------
Confidence 799999999996321 0
Q ss_pred CCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeH
Q psy15912 377 QLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITR 456 (482)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr 456 (482)
...+|+++|++++++++++.++++|.++|.++++..+||||++|+++|+||+
T Consensus 198 ----------------------------~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~ 249 (556)
T 4af0_A 198 ----------------------------AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVAR 249 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEe
Confidence 0127999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHhhcc
Q psy15912 457 KDLARYRVWRHG 468 (482)
Q Consensus 457 ~DLl~~~~~~~~ 468 (482)
+|+.+...+...
T Consensus 250 kDi~k~~~~p~A 261 (556)
T 4af0_A 250 SDLLKNQNYPYA 261 (556)
T ss_dssp --------CTTC
T ss_pred chhhhhhhCCcc
Confidence 999988765543
No 69
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.31 E-value=2e-13 Score=145.37 Aligned_cols=126 Identities=18% Similarity=0.259 Sum_probs=4.6
Q ss_pred ccchhhc-ccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCC
Q psy15912 212 NITARIV-KSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDA 290 (482)
Q Consensus 212 ~l~a~dv-M~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (482)
.++..++ |.++++++++++++.++++.|.+++++.+||+|++..
T Consensus 95 ~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~----------------------------------- 139 (503)
T 1me8_A 95 AVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTP----------------------------------- 139 (503)
T ss_dssp HHHTTTC-------------------------------------------------------------------------
T ss_pred hhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCc-----------------------------------
Confidence 4455566 9999999999999999999999999999999986400
Q ss_pred CCCCCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccC
Q psy15912 291 SRKESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKEN 370 (482)
Q Consensus 291 ~~~~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~ 370 (482)
.++++|+|+.+|+... ..
T Consensus 140 -----~g~lvGiVt~~Dl~~~--~~------------------------------------------------------- 157 (503)
T 1me8_A 140 -----HGVLLGLVTQRDYPID--LT------------------------------------------------------- 157 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----CCeEEEEEEHHHHHhh--hc-------------------------------------------------------
Confidence 1589999999998642 00
Q ss_pred CCCCCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccC--ceeeeCCCCHHHHHHHHHHcCCCEEEEECCCC
Q psy15912 371 QNWPDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTS--PFSVQDSTSLPRVFKLFRALGLRHVVVVNNNN 448 (482)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~--p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g 448 (482)
....+++++|+++ ++++++++++.++.++|++.+++.+||||++|
T Consensus 158 ---------------------------------~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g 204 (503)
T 1me8_A 158 ---------------------------------QTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQ 204 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------cccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCC
Confidence 0112789999988 99999999999999999999999999999999
Q ss_pred eEEEEEeHHHhHHHHHhhc
Q psy15912 449 HVVGMITRKDLARYRVWRH 467 (482)
Q Consensus 449 ~lvGIITr~DLl~~~~~~~ 467 (482)
+++|+||++|+++......
T Consensus 205 ~lvGiIT~~Dil~~~~~~~ 223 (503)
T 1me8_A 205 HLRYIVFRKDYDRSQVCHN 223 (503)
T ss_dssp -----------------CC
T ss_pred eEEEEEEecHHHHhhhccc
Confidence 9999999999998866443
No 70
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.26 E-value=1.3e-13 Score=147.41 Aligned_cols=172 Identities=19% Similarity=0.275 Sum_probs=95.8
Q ss_pred HHHHHHHHhhCCchhhHHHHHHHH-------HHHHHhhhcCCChhHHHHHHcCCCCCCCC--CCCC----ccccchhhcc
Q psy15912 153 SLTIILIEATGNISFGLPLMLTLI-------TAKWIGDFFTEGLYDIHIQLSGIPLLAWD--PPPL----SSNITARIVK 219 (482)
Q Consensus 153 s~~vi~~Eltg~~~~~~Pl~ia~~-------ia~~v~~~~~~siy~~~L~~~g~p~l~~~--~~~~----l~~l~a~dvM 219 (482)
+.+.+..|+|+++.+.+|++.+.+ ++..++.. .+..++... .... ..-.+++|+|
T Consensus 47 ~~v~l~~eLt~~~~~~iP~vsa~md~~t~~~la~~ia~~------------gg~gii~~~~t~e~~~~~v~~v~~~~~im 114 (514)
T 1jcn_A 47 DEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALM------------GGIGFIHHNCTPEFQANEVRKVKNFEQGF 114 (514)
T ss_dssp GGCBCCEESSSSCEESSCEEECCCTTTCSHHHHHHHHHT------------TCEEEECCSSCHHHHHHHHHHHHTCCTTS
T ss_pred ceeEEEeeccCCeeEeceEEEEehhhhhhhhHHHHHHhc------------CCeeEEecCCCHHHHHHHHHhhhhhhhcc
Confidence 456677899999999999887632 23333322 111111100 0000 0123678999
Q ss_pred cCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCCCCCCeE
Q psy15912 220 SHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRKESPGRL 299 (482)
Q Consensus 220 ~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 299 (482)
.++++++.+++++.+++++|.+++++.+||+|++. .++++
T Consensus 115 ~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~----------------------------------------~~~~l 154 (514)
T 1jcn_A 115 ITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGT----------------------------------------MGSKL 154 (514)
T ss_dssp CSSCCCCCC-----------------CEESCC------------------------------------------------
T ss_pred ccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCC----------------------------------------cCCEE
Confidence 99999999999999999999999999999999730 01589
Q ss_pred EEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCCCCCCCCC
Q psy15912 300 VGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLS 379 (482)
Q Consensus 300 vGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 379 (482)
+|+|+.+|+......
T Consensus 155 vGiVt~~Dl~~~~~~----------------------------------------------------------------- 169 (514)
T 1jcn_A 155 VGIVTSRDIDFLAEK----------------------------------------------------------------- 169 (514)
T ss_dssp CCEECTTTTC----------------------------------------------------------------------
T ss_pred EEEEEHHHHHhhhhc-----------------------------------------------------------------
Confidence 999999987432100
Q ss_pred hhhhhhhCCCCCCCCccccCcccccccccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHH
Q psy15912 380 SEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRK 457 (482)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~ 457 (482)
....+++++|++ +++++++++++.++.++|.+.+.+++||||++|+++|+||++
T Consensus 170 ------------------------~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~ 225 (514)
T 1jcn_A 170 ------------------------DHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIART 225 (514)
T ss_dssp -----------------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CC
T ss_pred ------------------------cCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHH
Confidence 011278899998 999999999999999999999999999999999999999999
Q ss_pred HhHHHHHh
Q psy15912 458 DLARYRVW 465 (482)
Q Consensus 458 DLl~~~~~ 465 (482)
|+++...+
T Consensus 226 Dll~~~~~ 233 (514)
T 1jcn_A 226 DLKKNRDY 233 (514)
T ss_dssp CCSSCCCC
T ss_pred HHHHHhhC
Confidence 99986543
No 71
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.15 E-value=3.1e-12 Score=135.75 Aligned_cols=114 Identities=23% Similarity=0.382 Sum_probs=1.9
Q ss_pred chhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCC
Q psy15912 214 TARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRK 293 (482)
Q Consensus 214 ~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (482)
.++|+|..+++++.+++++.++++.|++++++.+||+|++
T Consensus 94 ~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~---------------------------------------- 133 (486)
T 2cu0_A 94 RAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDE---------------------------------------- 133 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECC----------------------------------------
Confidence 3467899999999999999999999999999999999863
Q ss_pred CCCCeEEEEEeHHHHHHHHHhhhhccCCCCCCccchhhhhhhccccccccCCCCccccchhhHHHHHHHHhhhhccCCCC
Q psy15912 294 ESPGRLVGLILRSQLIILIKHKIYKENQNWPDDQLSSEIFHAEYRCRPRIWSPGRLVGLILRSQLIILIKHKIYKENQNW 373 (482)
Q Consensus 294 ~~~g~lvGiIs~~dL~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~~l~~~~~~~~~~~~~~~ 373 (482)
+++|+|+.+|+.. ..
T Consensus 134 ----~lvGivt~~Dl~~---~~---------------------------------------------------------- 148 (486)
T 2cu0_A 134 ----KVVGIITKKDIAA---RE---------------------------------------------------------- 148 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----EEEEEEEHHHhcc---CC----------------------------------------------------------
Confidence 8999999999753 10
Q ss_pred CCCCCChhhhhhhCCCCCCCCccccCccccccccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEE
Q psy15912 374 PDDQLSSEIFHAEYPRYPSVNDLVVSENDRSFTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGM 453 (482)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGI 453 (482)
..+++++|+++++++++++++.+++++|.+.+.+.+||||++|+++|+
T Consensus 149 --------------------------------~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGi 196 (486)
T 2cu0_A 149 --------------------------------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGL 196 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------CCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEE
Confidence 126888999999999999999999999999999999999999999999
Q ss_pred EeHHHhHHHHH
Q psy15912 454 ITRKDLARYRV 464 (482)
Q Consensus 454 ITr~DLl~~~~ 464 (482)
||++|+++...
T Consensus 197 iT~~Dil~~~~ 207 (486)
T 2cu0_A 197 ITMSDLVARKK 207 (486)
T ss_dssp ----------C
T ss_pred EEHHHHHHhhh
Confidence 99999998754
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.80 E-value=6.2e-09 Score=94.06 Aligned_cols=56 Identities=27% Similarity=0.393 Sum_probs=54.0
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
++|+++|+++++++++++++.+|.++|.+.+++++||+|++|+++|+||.+|+++.
T Consensus 18 ~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~ 73 (170)
T 4esy_A 18 VPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRG 73 (170)
T ss_dssp SBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGG
T ss_pred CCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999865
No 73
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.62 E-value=4.6e-08 Score=83.77 Aligned_cols=58 Identities=17% Similarity=0.154 Sum_probs=54.3
Q ss_pred ccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 406 TVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 406 ~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
++.++++|.+++.++++++++.+|.+.|++.+.+++||+|+ |+++|+||++|+++...
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~ 61 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRK 61 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCS
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHh
Confidence 45899999999999999999999999999999999999998 99999999999997643
No 74
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.61 E-value=1.1e-07 Score=83.60 Aligned_cols=60 Identities=17% Similarity=0.339 Sum_probs=55.2
Q ss_pred cccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHhHHHHHh
Q psy15912 406 TVKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN-NHVVGMITRKDLARYRVW 465 (482)
Q Consensus 406 ~i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~-g~lvGIITr~DLl~~~~~ 465 (482)
..+++++|++ ++.++++++++.+|.+.|++.+.+++||+|++ |+++|+||++|+++....
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~ 84 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKIN 84 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHH
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc
Confidence 3589999998 99999999999999999999999999999987 899999999999987543
No 75
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.61 E-value=9.4e-08 Score=83.12 Aligned_cols=71 Identities=13% Similarity=0.204 Sum_probs=58.9
Q ss_pred ccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCC--eEEEEEeHHHhHHHHHhhcccccccccc
Q psy15912 406 TVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNN--HVVGMITRKDLARYRVWRHGGRMGLEEL 476 (482)
Q Consensus 406 ~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g--~lvGIITr~DLl~~~~~~~~~~~~~~~~ 476 (482)
.+.++++|++++.++++++++.+|.+.|.+.+.+++||+|++| +++|+||++|++++..........++++
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~ 76 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPI 76 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGG
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHH
Confidence 3579999999999999999999999999999999999999888 9999999999998754332223344443
No 76
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.60 E-value=8.7e-08 Score=74.11 Aligned_cols=47 Identities=23% Similarity=0.387 Sum_probs=43.2
Q ss_pred ceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 417 PFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 417 p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
++++++++++.+|.++|.+.+++++||+| +|+++||||.+|+++...
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 57899999999999999999999999997 689999999999987543
No 77
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.56 E-value=9.3e-08 Score=84.13 Aligned_cols=58 Identities=19% Similarity=0.240 Sum_probs=54.6
Q ss_pred ccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
..++++|++ +++++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|+++...
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 87 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFD 87 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHh
Confidence 479999999 9999999999999999999999999999998999999999999998654
No 78
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.56 E-value=1.3e-07 Score=72.00 Aligned_cols=48 Identities=23% Similarity=0.380 Sum_probs=44.2
Q ss_pred CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 416 SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 416 ~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
++.++++++++.+|.+.|++.+.+++||+|+ |+++|+||++|++++..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 3678999999999999999999999999986 99999999999998754
No 79
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.55 E-value=1.2e-07 Score=81.91 Aligned_cols=58 Identities=16% Similarity=0.336 Sum_probs=53.9
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHh-HHHHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDL-ARYRV 464 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DL-l~~~~ 464 (482)
..++++|++++.++++++++.++.+.|.+.+.+++||+|++|+++|+||++|+ +++..
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 47999999999999999999999999999999999999988999999999999 77543
No 80
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.55 E-value=2.1e-07 Score=79.90 Aligned_cols=69 Identities=25% Similarity=0.325 Sum_probs=58.1
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHHhhcccccccccc
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRVWRHGGRMGLEEL 476 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~~~~~~~~~~~~~ 476 (482)
..++++|.++++++++++++.+|.+.|.+.+.+++||+| +|+++|+||++|+++...........++++
T Consensus 4 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~ 72 (133)
T 2ef7_A 4 EIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEF 72 (133)
T ss_dssp CBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCTTCBGGGT
T ss_pred ccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCCcccCHHHH
Confidence 479999999999999999999999999999999999999 899999999999988755433223344443
No 81
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.54 E-value=1.4e-07 Score=81.43 Aligned_cols=55 Identities=27% Similarity=0.540 Sum_probs=52.5
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLAR 461 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~ 461 (482)
..++++|+++++++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|+++
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 61 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIR 61 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHH
Confidence 4799999999999999999999999999999999999998899999999999984
No 82
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.54 E-value=9.9e-08 Score=82.78 Aligned_cols=58 Identities=14% Similarity=0.225 Sum_probs=52.9
Q ss_pred cccccccc--cCceeeeCCCCHHHHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMN--TSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN-NHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~--~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~-g~lvGIITr~DLl~~~~ 464 (482)
..++++|+ +++.++++++++.+|.++|++.+++++||+|++ |+++|+||.+|++++..
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~ 63 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLIL 63 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGG
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH
Confidence 37899998 567999999999999999999999999999987 89999999999998754
No 83
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.53 E-value=1.9e-07 Score=90.25 Aligned_cols=61 Identities=15% Similarity=0.306 Sum_probs=55.1
Q ss_pred cccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCC--CeEEEEEeHHHhHHHHHh
Q psy15912 405 FTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN--NHVVGMITRKDLARYRVW 465 (482)
Q Consensus 405 ~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~--g~lvGIITr~DLl~~~~~ 465 (482)
..+.++++|++++++|.+++++.+|.++|.+.+++++||||++ ++++|+||++||+++...
T Consensus 11 ~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~ 73 (250)
T 2d4z_A 11 YNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQR 73 (250)
T ss_dssp SSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHH
Confidence 3458999999999999999999999999999999999999864 689999999999987543
No 84
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.51 E-value=1.7e-07 Score=89.74 Aligned_cols=58 Identities=19% Similarity=0.362 Sum_probs=55.1
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
.+++++|+++++++++++++.+|.++|.+.+++++||+|++|+++||||.+|++++..
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 7 LKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 4799999999999999999999999999999999999998899999999999998764
No 85
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.51 E-value=1.5e-07 Score=79.46 Aligned_cols=57 Identities=19% Similarity=0.380 Sum_probs=53.7
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
+++++|++++.++++++++.++.+.|.+.+.+++||+|++|+++|+||++|++++..
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~ 58 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALA 58 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHH
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHH
Confidence 578999999999999999999999999999999999998999999999999998754
No 86
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.51 E-value=1.7e-07 Score=79.30 Aligned_cols=56 Identities=21% Similarity=0.209 Sum_probs=52.5
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
+++++|++++.++++++++.+|.+.|.+.+.+++||+| +|+++|+||++|+++...
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~ 57 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIA 57 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHh
Confidence 57899999999999999999999999999999999999 899999999999997654
No 87
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.50 E-value=2.8e-07 Score=71.19 Aligned_cols=46 Identities=13% Similarity=0.372 Sum_probs=41.9
Q ss_pred eeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCCCCCCeEEEE
Q psy15912 223 VICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRKESPGRLVGL 302 (482)
Q Consensus 223 ~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvGi 302 (482)
++++.|++++.++.++|.+++++++||+|+ ++++|+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~--------------------------------------------~~lvGI 37 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG--------------------------------------------DEILGV 37 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET--------------------------------------------TEEEEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC--------------------------------------------CEEEEE
Confidence 679999999999999999999999999985 489999
Q ss_pred EeHHHHHHHH
Q psy15912 303 ILRSQLIILI 312 (482)
Q Consensus 303 Is~~dL~~~l 312 (482)
+|.+|+.+.+
T Consensus 38 vT~~Di~~~~ 47 (70)
T 3ghd_A 38 VTERDILDKV 47 (70)
T ss_dssp EEHHHHHHHT
T ss_pred EEHHHHHHHH
Confidence 9999997654
No 88
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.50 E-value=1.7e-07 Score=83.64 Aligned_cols=58 Identities=26% Similarity=0.517 Sum_probs=54.7
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
+.++++|+++++++++++++.+|.++|.+.+.+++||+|++|+++|+||++||+++..
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 62 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQE 62 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Confidence 4799999999999999999999999999999999999998899999999999998754
No 89
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.50 E-value=1.8e-07 Score=80.26 Aligned_cols=57 Identities=19% Similarity=0.300 Sum_probs=52.6
Q ss_pred cccccccc--cCceeeeCCCCHHHHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHhHHHH
Q psy15912 407 VKLNLFMN--TSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN-NHVVGMITRKDLARYR 463 (482)
Q Consensus 407 i~v~~im~--~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~-g~lvGIITr~DLl~~~ 463 (482)
..++++|+ ++++++++++++.+|.+.|++.+.+++||+|++ |+++|+||.+|++++.
T Consensus 5 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~ 64 (129)
T 3jtf_A 5 RTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYM 64 (129)
T ss_dssp CBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGG
T ss_pred CCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHh
Confidence 47999999 667899999999999999999999999999985 8999999999999864
No 90
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.50 E-value=1.6e-07 Score=102.61 Aligned_cols=125 Identities=11% Similarity=0.042 Sum_probs=96.5
Q ss_pred ccccccCCCchhhhhhhcccc-------ccc-cCCCc--ccccccCCCCcceehHHHHHHHHHHHHHHH--HHHHhcCCC
Q psy15912 60 YGVSVSGGGMPEKYDFLSKDN-------VWK-SNGKP--RSLSEQLSDSGGVFIPCLLTGAAWGRLFSL--FLQSIFPEA 127 (482)
Q Consensus 60 ~~~~~~g~G~~~~~~~l~~~~-------~~~-~~~~~--~~~~~~~G~~gG~f~Psl~iGa~~G~~~g~--~~~~~~~~~ 127 (482)
+.-...|.|-+.+..+++|.. .|. ++.|. +.+|+|+|+|.|...|+..+||++|..++. .+.....+.
T Consensus 73 ~~p~a~GsGIp~v~~~l~g~~~~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~~~~~~~ 152 (632)
T 3org_A 73 LSTEAEGSGLPQMKSILSGFYDKMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFKELCTDR 152 (632)
T ss_dssp SCGGGCBCSHHHHHHHTTTTHHHHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHHHHHHSH
T ss_pred cCCccCCCCHHHHHHHHhCccccccccccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhccccCCH
Confidence 344566888889999998864 122 23555 999999999999999999999999998777 544322111
Q ss_pred CCCchhHHHHHHHHHHhhhhhchhHHHHHHHHHhhCC---chhhHHHHHHHHHHHHHhhhcC
Q psy15912 128 TWIDPGKYALIGAAAQLGGVVRMTISLTIILIEATGN---ISFGLPLMLTLITAKWIGDFFT 186 (482)
Q Consensus 128 ~~~~~~~~a~vG~aa~~~g~~~~p~s~~vi~~Eltg~---~~~~~Pl~ia~~ia~~v~~~~~ 186 (482)
.+...+..+|+||-++++.++|++++++.+|.... ...+.|.+++++++..+.+.+.
T Consensus 153 --~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~~~ 212 (632)
T 3org_A 153 --ALRLQTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYELLY 212 (632)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC--
T ss_pred --HHHHHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 13456889999999999999999999999999874 2456899999999888887653
No 91
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.49 E-value=1.4e-07 Score=84.26 Aligned_cols=59 Identities=19% Similarity=0.302 Sum_probs=52.7
Q ss_pred cccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHHhh
Q psy15912 408 KLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRVWR 466 (482)
Q Consensus 408 ~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~~~ 466 (482)
.++++|.+ +..++++++++.+|.++|.+.+++++||+|++|+++|+||.+|++++....
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~ 76 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEH 76 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHH
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhc
Confidence 67889985 678999999999999999999999999999999999999999999876543
No 92
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.45 E-value=1.9e-07 Score=79.83 Aligned_cols=57 Identities=14% Similarity=0.310 Sum_probs=52.6
Q ss_pred cccccccccC--ceeeeCCCCHHHHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHhHHHH
Q psy15912 407 VKLNLFMNTS--PFSVQDSTSLPRVFKLFRALGLRHVVVVNNN-NHVVGMITRKDLARYR 463 (482)
Q Consensus 407 i~v~~im~~~--p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~-g~lvGIITr~DLl~~~ 463 (482)
..++++|++. ++++++++++.+|.+.|++.+.+++||+|++ |+++|+||.+|+++..
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~ 62 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFM 62 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGG
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHH
Confidence 3789999965 8999999999999999999999999999987 8999999999999764
No 93
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.44 E-value=3.1e-07 Score=82.28 Aligned_cols=62 Identities=18% Similarity=0.257 Sum_probs=56.0
Q ss_pred ccccccccccc---CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHHhh
Q psy15912 405 FTVKLNLFMNT---SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRVWR 466 (482)
Q Consensus 405 ~~i~v~~im~~---~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~~~ 466 (482)
..+.++++|++ +++++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|+++.....
T Consensus 22 ~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 22 MATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp SSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred hhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhc
Confidence 34689999996 689999999999999999999999999999899999999999999875443
No 94
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.41 E-value=3e-07 Score=81.35 Aligned_cols=58 Identities=19% Similarity=0.304 Sum_probs=53.2
Q ss_pred ccccccc--cCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHHh
Q psy15912 408 KLNLFMN--TSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRVW 465 (482)
Q Consensus 408 ~v~~im~--~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~~ 465 (482)
+++++|. +++.++++++++.+|.++|.+.+.+++||+|++|+++|+||.+|+++....
T Consensus 16 ~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp TGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHh
Confidence 7899999 678999999999999999999999999999989999999999999987653
No 95
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.41 E-value=3.1e-07 Score=86.27 Aligned_cols=60 Identities=15% Similarity=0.176 Sum_probs=54.2
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
..+++|+|.+++.++.+++++.++.+.|.+++++.+||+|++
T Consensus 71 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-------------------------------------- 112 (213)
T 1vr9_A 71 DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEE-------------------------------------- 112 (213)
T ss_dssp TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTT--------------------------------------
T ss_pred CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCC--------------------------------------
Confidence 346899999999999999999999999999999999999975
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHh
Q psy15912 292 RKESPGRLVGLILRSQLIILIKH 314 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~ 314 (482)
|+++|+|+.+|++..+..
T Consensus 113 -----g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 113 -----MRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp -----CBEEEEEEHHHHHHHHHH
T ss_pred -----CEEEEEEEHHHHHHHHHH
Confidence 699999999999887654
No 96
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.41 E-value=5.2e-07 Score=81.58 Aligned_cols=68 Identities=19% Similarity=0.219 Sum_probs=57.4
Q ss_pred cccccccc--cCceeeeCCCCHHHHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHhHHHHHhhcccccccccc
Q psy15912 407 VKLNLFMN--TSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN-NHVVGMITRKDLARYRVWRHGGRMGLEEL 476 (482)
Q Consensus 407 i~v~~im~--~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~-g~lvGIITr~DLl~~~~~~~~~~~~~~~~ 476 (482)
..++++|+ ++++++++++++.+|.+.|++.+++++||+|++ ++++|+||.+|++++.... ....++++
T Consensus 42 ~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~--~~~~v~~i 112 (172)
T 3lhh_A 42 RTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG--ERLELVDL 112 (172)
T ss_dssp -CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT--CCCCGGGG
T ss_pred CCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc--CcccHHHH
Confidence 47999999 678999999999999999999999999999987 9999999999999876432 23445444
No 97
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.40 E-value=5.1e-07 Score=80.34 Aligned_cols=56 Identities=21% Similarity=0.370 Sum_probs=52.5
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYR 463 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~ 463 (482)
+.++++|++ |+++++++++.+|.+.|.+.+.+++||+|++|+++|+||.+|+++..
T Consensus 17 ~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 72 (159)
T 3fv6_A 17 LQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRAS 72 (159)
T ss_dssp CBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred CCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHh
Confidence 489999987 67999999999999999999999999999899999999999999864
No 98
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.40 E-value=3.1e-07 Score=80.58 Aligned_cols=58 Identities=14% Similarity=0.132 Sum_probs=53.7
Q ss_pred cccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHH
Q psy15912 406 TVKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYR 463 (482)
Q Consensus 406 ~i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~ 463 (482)
.+.++++|++ ++.++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|+++..
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 73 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGI 73 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHT
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHH
Confidence 3589999994 589999999999999999999999999999999999999999999765
No 99
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.39 E-value=3.2e-07 Score=81.51 Aligned_cols=57 Identities=19% Similarity=0.311 Sum_probs=52.7
Q ss_pred ccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCC-eEEEEEeHHHhHHHH
Q psy15912 407 VKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNN-HVVGMITRKDLARYR 463 (482)
Q Consensus 407 i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g-~lvGIITr~DLl~~~ 463 (482)
..++++|++ +++++++++++.+|.+.|++.+.+++||+|+++ +++|+||.+|++++.
T Consensus 38 ~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~ 97 (156)
T 3oi8_A 38 LEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYM 97 (156)
T ss_dssp CBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGS
T ss_pred CCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHH
Confidence 479999987 789999999999999999999999999999874 999999999999864
No 100
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=98.39 E-value=4.6e-07 Score=95.32 Aligned_cols=122 Identities=18% Similarity=0.188 Sum_probs=97.3
Q ss_pred ccccccCCCchhhhhhhcccc--cc-c-cCCCc--ccccccCCCCcceehHHHHHHHHHHHHHHHHHHHhcCCCCCCchh
Q psy15912 60 YGVSVSGGGMPEKYDFLSKDN--VW-K-SNGKP--RSLSEQLSDSGGVFIPCLLTGAAWGRLFSLFLQSIFPEATWIDPG 133 (482)
Q Consensus 60 ~~~~~~g~G~~~~~~~l~~~~--~~-~-~~~~~--~~~~~~~G~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~ 133 (482)
++-...|.|.+.+..+++|+- .| . ...|. +.+|+++|+|.|...|+..+||++|..+++.+.. .. ..+..
T Consensus 100 ~~p~a~GsGip~v~~~l~~~~~~~~~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~~~~l---~~-~~~~r 175 (465)
T 1ots_A 100 YAPEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL---KG-DEARH 175 (465)
T ss_dssp HCGGGSSCSHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC---CS-HHHHH
T ss_pred hCccccCCChHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHHHhcc---CC-HHHHH
Confidence 344556788999999998853 22 2 24555 9999999999999999999999999999986531 01 12456
Q ss_pred HHHHHHHHHHhhhhhchhHHHHHHHHHhhC-Cch--h--hHHHHHHHHHHHHHhhhc
Q psy15912 134 KYALIGAAAQLGGVVRMTISLTIILIEATG-NIS--F--GLPLMLTLITAKWIGDFF 185 (482)
Q Consensus 134 ~~a~vG~aa~~~g~~~~p~s~~vi~~Eltg-~~~--~--~~Pl~ia~~ia~~v~~~~ 185 (482)
.+..+|+||-++++.++|++.+++.+|... .+. . +.|.++++++++.+++.+
T Consensus 176 ~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~ 232 (465)
T 1ots_A 176 TLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIF 232 (465)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999998775 333 4 889999999999999864
No 101
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.39 E-value=2.4e-07 Score=79.45 Aligned_cols=55 Identities=16% Similarity=0.306 Sum_probs=52.2
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLAR 461 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~ 461 (482)
..++++|.++++++++++++.++.+.|.+.+.+++||+|++|+++|+||++|+++
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVI 62 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHH
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHH
Confidence 4789999999999999999999999999999999999998899999999999984
No 102
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.38 E-value=3.9e-07 Score=80.92 Aligned_cols=58 Identities=16% Similarity=0.217 Sum_probs=54.2
Q ss_pred ccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
.+++++|.+ +++++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|++++..
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 73 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIF 73 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHB
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhh
Confidence 479999998 8999999999999999999999999999998899999999999998653
No 103
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.38 E-value=4.6e-07 Score=79.14 Aligned_cols=56 Identities=18% Similarity=0.322 Sum_probs=52.8
Q ss_pred ccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 407 VKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 407 i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
++++++|.+ +++++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|+++.
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLAL 62 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTC
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHh
Confidence 589999998 89999999999999999999999999999988999999999999864
No 104
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.37 E-value=5e-07 Score=79.75 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=53.8
Q ss_pred cccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHH
Q psy15912 406 TVKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYR 463 (482)
Q Consensus 406 ~i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~ 463 (482)
...++++|.+ +++++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|++++.
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 69 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAI 69 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHS
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHH
Confidence 3489999997 889999999999999999999999999999889999999999999764
No 105
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.36 E-value=4.7e-07 Score=80.04 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=53.9
Q ss_pred ccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEE-CC-CCeEEEEEeHHHhHHHHHhh
Q psy15912 407 VKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVV-NN-NNHVVGMITRKDLARYRVWR 466 (482)
Q Consensus 407 i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVV-D~-~g~lvGIITr~DLl~~~~~~ 466 (482)
.+++++|++ +++++++++++.+|.+.|++.+.+++||+ |+ +|+++|+||++|++++....
T Consensus 20 ~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~ 83 (153)
T 3oco_A 20 KVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID 83 (153)
T ss_dssp CBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH
T ss_pred CEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC
Confidence 479999997 89999999999999999999999999999 65 48999999999999875433
No 106
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.36 E-value=7.2e-07 Score=81.39 Aligned_cols=58 Identities=19% Similarity=0.312 Sum_probs=54.4
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
+.++++|++.++++++++++.+|.++|.+.+.+++||+|++|+++|+||.+|++++..
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTG
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Confidence 5899999999999999999999999999999999999998899999999999998643
No 107
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.36 E-value=2.8e-07 Score=79.06 Aligned_cols=58 Identities=14% Similarity=0.342 Sum_probs=52.0
Q ss_pred cccccccccC--ceeeeCCCCHHHHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMNTS--PFSVQDSTSLPRVFKLFRALGLRHVVVVNNN-NHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~~~--p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~-g~lvGIITr~DLl~~~~ 464 (482)
.+++++|++. .+++++++++.+|.+.|++.+.+++||+|++ |+++|+||.+|++++..
T Consensus 6 ~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~ 66 (130)
T 3i8n_A 6 VPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQ 66 (130)
T ss_dssp -CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHH
T ss_pred CCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHh
Confidence 4799999954 4589999999999999999999999999987 89999999999998754
No 108
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.36 E-value=4e-07 Score=78.34 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=52.0
Q ss_pred ccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECC-CCeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNN-NNHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~-~g~lvGIITr~DLl~~~~ 464 (482)
+.++++|++ +++++++++++.+|.+.|++.+++++||+|+ +|+++|+||.+|++++..
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~ 62 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMT 62 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHT
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 368999964 6889999999999999999999999999975 589999999999998754
No 109
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.35 E-value=5.8e-07 Score=79.76 Aligned_cols=59 Identities=24% Similarity=0.373 Sum_probs=54.5
Q ss_pred ccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC--CCeEEEEEeHHHhHHHHH
Q psy15912 406 TVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN--NNHVVGMITRKDLARYRV 464 (482)
Q Consensus 406 ~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~--~g~lvGIITr~DLl~~~~ 464 (482)
...++++|+++++++++++++.+|.++|.+.+.+++||+|+ +|+++|+||++|+++...
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHH
Confidence 35799999999999999999999999999999999999986 789999999999998653
No 110
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=98.32 E-value=1.1e-06 Score=92.34 Aligned_cols=121 Identities=17% Similarity=0.137 Sum_probs=96.3
Q ss_pred ccccccCCCchhhhhhhccccccc----cCCCc--ccccccCCCCcceehHHHHHHHHHHHHHHHHHHHhcCCCCCCchh
Q psy15912 60 YGVSVSGGGMPEKYDFLSKDNVWK----SNGKP--RSLSEQLSDSGGVFIPCLLTGAAWGRLFSLFLQSIFPEATWIDPG 133 (482)
Q Consensus 60 ~~~~~~g~G~~~~~~~l~~~~~~~----~~~~~--~~~~~~~G~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~ 133 (482)
+.-...|.|-+.+..+++|..... +..|. +.+|+++|+|.|...|+..+||++|..+++.+.. . ..+..
T Consensus 96 ~~p~a~GsGIp~v~~~l~g~~~~~~~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~~~----~-~~~~r 170 (466)
T 3nd0_A 96 FAPDTSGSGIPQIEGHLEGKLPLVWQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKA----T-QENQR 170 (466)
T ss_dssp TCGGGSBCSHHHHHHHTTSSSCCCHHHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHTTC----C-HHHHH
T ss_pred HCCCcCCCCHHHHHHHHcCCCCCchHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHcCC----C-hhHHH
Confidence 344456788889999998763221 23554 9999999999999999999999999999986531 1 12456
Q ss_pred HHHHHHHHHHhhhhhchhHHHHHHHHHhhC-Cc----hhhHHHHHHHHHHHHHhhhc
Q psy15912 134 KYALIGAAAQLGGVVRMTISLTIILIEATG-NI----SFGLPLMLTLITAKWIGDFF 185 (482)
Q Consensus 134 ~~a~vG~aa~~~g~~~~p~s~~vi~~Eltg-~~----~~~~Pl~ia~~ia~~v~~~~ 185 (482)
.+..+|+||-++++.++|++.+++.+|... .+ ..+.|.++++++++.+++.+
T Consensus 171 ~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~ 227 (466)
T 3nd0_A 171 ILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMI 227 (466)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999654 43 23669999999999999865
No 111
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.29 E-value=5.7e-07 Score=81.09 Aligned_cols=56 Identities=23% Similarity=0.335 Sum_probs=52.8
Q ss_pred ccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 407 VKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 407 i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
+.++++|.+ +++++++++++.+|.++|.+.+.+++||+|++|+++|+||++|+++.
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 61 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLAL 61 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhh
Confidence 478999998 89999999999999999999999999999999999999999999853
No 112
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.28 E-value=1.1e-06 Score=75.62 Aligned_cols=54 Identities=15% Similarity=0.356 Sum_probs=51.2
Q ss_pred ccccccc---cCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 408 KLNLFMN---TSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 408 ~v~~im~---~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
+++++|+ ++++++++++++.+|.+.|.+.+.+++||+| +|+++|+||++|+++.
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~ 63 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRK 63 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHH
Confidence 7899999 8999999999999999999999999999998 8999999999999864
No 113
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.28 E-value=1.6e-06 Score=74.97 Aligned_cols=57 Identities=12% Similarity=0.136 Sum_probs=52.2
Q ss_pred cccc---ccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 408 KLNL---FMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 408 ~v~~---im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
++++ +|.++++++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|++++..
T Consensus 9 ~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 68 (144)
T 2nyc_A 9 PIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 68 (144)
T ss_dssp BGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred chhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhc
Confidence 4555 89899999999999999999999999999999998899999999999998654
No 114
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.27 E-value=1.1e-06 Score=79.66 Aligned_cols=60 Identities=22% Similarity=0.212 Sum_probs=54.7
Q ss_pred ccccccccccC----ceee--eCCCCHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEeHHHhHHHHHh
Q psy15912 406 TVKLNLFMNTS----PFSV--QDSTSLPRVFKLFRALGLRHVVVV--NNNNHVVGMITRKDLARYRVW 465 (482)
Q Consensus 406 ~i~v~~im~~~----p~~V--~~~~~l~~a~~~f~~~~lr~lpVV--D~~g~lvGIITr~DLl~~~~~ 465 (482)
...++++|.+. ++++ ++++++.+|.++|.+.+.+++||+ |++|+++|+||++|+++....
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHH
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 45899999987 7888 999999999999999999999999 788999999999999987543
No 115
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=98.27 E-value=2.3e-06 Score=89.56 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=96.0
Q ss_pred cccccCCCchhhhhhhccc--cc-cc-cCCCc--ccccccCCCCcceehHHHHHHHHHHHHHHHHHHHhcCCCCCCchh-
Q psy15912 61 GVSVSGGGMPEKYDFLSKD--NV-WK-SNGKP--RSLSEQLSDSGGVFIPCLLTGAAWGRLFSLFLQSIFPEATWIDPG- 133 (482)
Q Consensus 61 ~~~~~g~G~~~~~~~l~~~--~~-~~-~~~~~--~~~~~~~G~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~- 133 (482)
.-...|.|-+.+..+++|. .. |. +..|. +.+|+++|+|-|...|+..+||++|..+++.+.. +. .+..
T Consensus 86 ~p~a~GsGip~v~~~l~~~~~~~~~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~~~--~~---~~~r~ 160 (446)
T 4ene_A 86 APEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL--KG---DEARH 160 (446)
T ss_dssp CGGGSSCSHHHHHHHHHTCSCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC--CS---HHHHH
T ss_pred CcccCCCCHHHHHHHHhCCCccchHHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHcCC--CH---HHHHH
Confidence 4455688888899889875 22 21 23554 8999999999999999999999999999876531 11 2333
Q ss_pred HHHHHHHHHHhhhhhchhHHHHHHHHHhhCC---c--hhhHHHHHHHHHHHHHhhhcC
Q psy15912 134 KYALIGAAAQLGGVVRMTISLTIILIEATGN---I--SFGLPLMLTLITAKWIGDFFT 186 (482)
Q Consensus 134 ~~a~vG~aa~~~g~~~~p~s~~vi~~Eltg~---~--~~~~Pl~ia~~ia~~v~~~~~ 186 (482)
.+..+|+||-++++.++|++.+++.+|.... + ..+.|.++++++++.+++.+.
T Consensus 161 ~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~ 218 (446)
T 4ene_A 161 TLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFN 218 (446)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHc
Confidence 7899999999999999999999999998762 2 347899999999999998763
No 116
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.26 E-value=1.1e-06 Score=77.89 Aligned_cols=59 Identities=19% Similarity=0.248 Sum_probs=54.3
Q ss_pred cccccccccccCceeeeCCCCHHHHHHHHHHcCCCE-EEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 405 FTVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRH-VVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 405 ~~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~-lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
....++++|+++++++++++++.+|.+.|.+.+.+. +||+|++ +++|+||++|++++..
T Consensus 14 ~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 14 KVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSG 73 (157)
T ss_dssp BHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHH
T ss_pred ccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHh
Confidence 345899999999999999999999999999999999 9999977 9999999999998643
No 117
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.25 E-value=1.9e-06 Score=78.17 Aligned_cols=58 Identities=17% Similarity=0.133 Sum_probs=52.9
Q ss_pred ccccccccc--CceeeeCCCCHHHHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHhHHHHH
Q psy15912 407 VKLNLFMNT--SPFSVQDSTSLPRVFKLFRALGLRHVVVVNNN-NHVVGMITRKDLARYRV 464 (482)
Q Consensus 407 i~v~~im~~--~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~-g~lvGIITr~DLl~~~~ 464 (482)
..++++|++ .++++++++++.+|.++|++.+++++||+|++ |+++|+||.+||+++..
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~ 96 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLI 96 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHH
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHh
Confidence 479999974 68899999999999999999999999999876 89999999999998754
No 118
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.19 E-value=3.9e-06 Score=63.63 Aligned_cols=48 Identities=13% Similarity=0.340 Sum_probs=43.2
Q ss_pred CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCCCCCCeEEE
Q psy15912 222 PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDASRKESPGRLVG 301 (482)
Q Consensus 222 ~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvG 301 (482)
++.++++++++.++++.|++++++.+||+|+ ++++|
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~--------------------------------------------~~l~G 36 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG--------------------------------------------DEILG 36 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET--------------------------------------------TEEEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC--------------------------------------------CEEEE
Confidence 4678999999999999999999999999986 38999
Q ss_pred EEeHHHHHHHHH
Q psy15912 302 LILRSQLIILIK 313 (482)
Q Consensus 302 iIs~~dL~~~l~ 313 (482)
+|+.+|+.+.+.
T Consensus 37 ivt~~dl~~~~~ 48 (70)
T 3fio_A 37 VVTERDILDKVV 48 (70)
T ss_dssp EEEHHHHHHHTT
T ss_pred EEEHHHHHHHHH
Confidence 999999987653
No 119
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.19 E-value=3.4e-06 Score=74.27 Aligned_cols=57 Identities=14% Similarity=0.263 Sum_probs=51.5
Q ss_pred ccccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 406 TVKLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 406 ~i~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
.+.++++ +++.++++++++.+|.+.|.+.+.+++||+|++|+++|+||++|+++...
T Consensus 22 ~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~ 78 (152)
T 2uv4_A 22 ELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAA 78 (152)
T ss_dssp HHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhc
Confidence 3467777 78889999999999999999999999999998999999999999998654
No 120
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.15 E-value=3.6e-06 Score=89.92 Aligned_cols=71 Identities=13% Similarity=0.179 Sum_probs=60.2
Q ss_pred ccccccccccCceeeeCC-CCHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEeHHHhHHHHHhh-cccccccccc
Q psy15912 406 TVKLNLFMNTSPFSVQDS-TSLPRVFKLFRALGLRHVVVVN-NNNHVVGMITRKDLARYRVWR-HGGRMGLEEL 476 (482)
Q Consensus 406 ~i~v~~im~~~p~~V~~~-~~l~~a~~~f~~~~lr~lpVVD-~~g~lvGIITr~DLl~~~~~~-~~~~~~~~~~ 476 (482)
..+|+++|++++++++++ +++.++.++|++.+++++||+| ++|+++||||++||++..... ......++++
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~i 456 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKA 456 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGG
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHH
Confidence 458999999999999999 9999999999999999999999 789999999999999876543 2223445544
No 121
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.06 E-value=3.9e-06 Score=74.13 Aligned_cols=56 Identities=23% Similarity=0.491 Sum_probs=50.8
Q ss_pred ccccccccCc------eeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHHHHH
Q psy15912 408 KLNLFMNTSP------FSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLARYRV 464 (482)
Q Consensus 408 ~v~~im~~~p------~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~~~~ 464 (482)
.++++|.+.+ +++++++++.+|.+.|.+.+.+++||+| +|+++|+||++|++++..
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~ 69 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVV 69 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSG
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHH
Confidence 6999999554 8999999999999999999999999975 899999999999998754
No 122
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.99 E-value=1e-05 Score=75.63 Aligned_cols=55 Identities=13% Similarity=0.388 Sum_probs=52.0
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHc---CCCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRAL---GLRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~---~lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
.++++|+++++++++++++.+|.+.|++. +.+++||+|++|+++|+||.+||+..
T Consensus 55 ~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 112 (205)
T 3kxr_A 55 EIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH 112 (205)
T ss_dssp CGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS
T ss_pred hHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC
Confidence 68999999999999999999999999997 88999999999999999999999864
No 123
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.88 E-value=1.3e-05 Score=78.72 Aligned_cols=56 Identities=23% Similarity=0.335 Sum_probs=52.5
Q ss_pred cccccccccCceeeeCCCCHHHHHHHHHHc-----CCCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 407 VKLNLFMNTSPFSVQDSTSLPRVFKLFRAL-----GLRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 407 i~v~~im~~~p~~V~~~~~l~~a~~~f~~~-----~lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
..++++|+++++++++++++.+|.+.|++. +++++||||++|+++|+||.+|++..
T Consensus 137 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~ 197 (286)
T 2oux_A 137 ETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN 197 (286)
T ss_dssp TBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS
T ss_pred HHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC
Confidence 378999999999999999999999999998 88999999989999999999999864
No 124
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.74 E-value=4.4e-05 Score=74.46 Aligned_cols=55 Identities=16% Similarity=0.335 Sum_probs=51.9
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHc-----CCCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRAL-----GLRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~-----~lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
.++++|+++++++++++++.+|.+.|++. ++.++||+|++|+++|+||.+|++..
T Consensus 136 ~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 136 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 195 (278)
T ss_dssp BGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS
T ss_pred hHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC
Confidence 78999999999999999999999999998 78999999989999999999999864
No 125
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.53 E-value=6.3e-05 Score=79.61 Aligned_cols=53 Identities=28% Similarity=0.429 Sum_probs=48.7
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLA 460 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl 460 (482)
.++++|.++|+++++++++.++.++|++.+++++||+|++++++||||++||.
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR 142 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh
Confidence 56778999999999999999999999999999999999899999999999997
No 126
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.41 E-value=0.00069 Score=71.92 Aligned_cols=60 Identities=23% Similarity=0.283 Sum_probs=55.4
Q ss_pred ccchhhcccC-CeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCC
Q psy15912 212 NITARIVKSH-PVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDA 290 (482)
Q Consensus 212 ~l~a~dvM~~-~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (482)
..+++|+|++ +++++++++++.+++++|++++.+.+||||++
T Consensus 174 ~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~------------------------------------- 216 (511)
T 3usb_A 174 SIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNN------------------------------------- 216 (511)
T ss_dssp SSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTT-------------------------------------
T ss_pred CCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCC-------------------------------------
Confidence 5689999998 99999999999999999999999999999986
Q ss_pred CCCCCCCeEEEEEeHHHHHHHHHh
Q psy15912 291 SRKESPGRLVGLILRSQLIILIKH 314 (482)
Q Consensus 291 ~~~~~~g~lvGiIs~~dL~~~l~~ 314 (482)
|+++|+|+.+|+++.+..
T Consensus 217 ------g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 217 ------GVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp ------SBEEEEEEHHHHHHHHHC
T ss_pred ------CCEeeeccHHHHHHhhhc
Confidence 799999999999988754
No 127
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.37 E-value=5.1e-05 Score=80.55 Aligned_cols=59 Identities=10% Similarity=0.106 Sum_probs=0.0
Q ss_pred ccchhhcccCC--eeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy15912 212 NITARIVKSHP--VICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGD 289 (482)
Q Consensus 212 ~l~a~dvM~~~--~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (482)
..+++|+|+++ ++++++++++.++++.|++++.+.+||||++
T Consensus 160 ~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~------------------------------------ 203 (503)
T 1me8_A 160 ETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDD------------------------------------ 203 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCC------------------------------------
Confidence 46799999987 9999999999999999999999999999976
Q ss_pred CCCCCCCCeEEEEEeHHHHHHHHH
Q psy15912 290 ASRKESPGRLVGLILRSQLIILIK 313 (482)
Q Consensus 290 ~~~~~~~g~lvGiIs~~dL~~~l~ 313 (482)
++++|+|+.+|+++.+.
T Consensus 204 -------g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 204 -------QHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------
T ss_pred -------CeEEEEEEecHHHHhhh
Confidence 69999999999987654
No 128
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.34 E-value=0.00025 Score=74.61 Aligned_cols=61 Identities=18% Similarity=0.355 Sum_probs=56.0
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
..+++|+|++++.++++++++.++.+.|++++.+.+||||++
T Consensus 218 ~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~-------------------------------------- 259 (473)
T 2zy9_A 218 RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEE-------------------------------------- 259 (473)
T ss_dssp TSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTT--------------------------------------
T ss_pred CCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCC--------------------------------------
Confidence 467999999999999999999999999999999999999976
Q ss_pred CCCCCCeEEEEEeHHHHHHHHHhh
Q psy15912 292 RKESPGRLVGLILRSQLIILIKHK 315 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l~~~ 315 (482)
|+++|+||.+|+++.+...
T Consensus 260 -----g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 260 -----GRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp -----SBEEEEEEHHHHHHHHHHH
T ss_pred -----CEEEEEEehHhhHHHHHHH
Confidence 7999999999999887654
No 129
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.22 E-value=4.9e-05 Score=80.41 Aligned_cols=54 Identities=19% Similarity=0.322 Sum_probs=1.2
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhHH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLAR 461 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl~ 461 (482)
.++++|.++++++++++++.++.++|++.+++.+||+|++++++|+||.+|+..
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRF 149 (494)
T ss_dssp TC----------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHh
Confidence 567889999999999999999999999999999999998899999999999985
No 130
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.22 E-value=0.00038 Score=73.49 Aligned_cols=54 Identities=20% Similarity=0.325 Sum_probs=51.0
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEEC--CCCeEEEEEeHHHhHH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVN--NNNHVVGMITRKDLAR 461 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD--~~g~lvGIITr~DLl~ 461 (482)
.++++|.++++++++++++.++.++|++.+.+++||+| ++++++|+||.+|++.
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF 146 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh
Confidence 46789999999999999999999999999999999999 7899999999999985
No 131
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.90 E-value=0.00015 Score=76.70 Aligned_cols=52 Identities=27% Similarity=0.457 Sum_probs=2.9
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHhH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNNNNHVVGMITRKDLA 460 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~~g~lvGIITr~DLl 460 (482)
.++++|.++|+++++++++.++.++|++.+++++||+| +++++||||.+||.
T Consensus 89 ~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~ 140 (490)
T 4avf_A 89 KHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLR 140 (490)
T ss_dssp HCCC-------------------------------------------------
T ss_pred ccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhh
Confidence 57788999999999999999999999999999999999 89999999999996
No 132
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.82 E-value=0.00016 Score=76.89 Aligned_cols=55 Identities=16% Similarity=0.298 Sum_probs=28.8
Q ss_pred ccccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC---CCeEEEEEeHHHhHHH
Q psy15912 408 KLNLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN---NNHVVGMITRKDLARY 462 (482)
Q Consensus 408 ~v~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~---~g~lvGIITr~DLl~~ 462 (482)
.++++|.++|+++++++++.++.++|.+.+.+.+||+|+ +++++|+||++|+...
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFL 166 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC--
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhh
Confidence 567889999999999999999999999999999999997 5899999999999763
No 133
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.35 E-value=0.0006 Score=71.67 Aligned_cols=51 Identities=16% Similarity=0.361 Sum_probs=0.8
Q ss_pred ccccccCceeeeCCCCHHHHHHHHHHcCCCEEEEECC---CCeEEEEEeHHHhH
Q psy15912 410 NLFMNTSPFSVQDSTSLPRVFKLFRALGLRHVVVVNN---NNHVVGMITRKDLA 460 (482)
Q Consensus 410 ~~im~~~p~~V~~~~~l~~a~~~f~~~~lr~lpVVD~---~g~lvGIITr~DLl 460 (482)
+..|..+|+++.|+.++.++.++|.+.++..+||+|+ +++++||||.+|+.
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~r 194 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ 194 (556)
T ss_dssp CC----------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccc
Confidence 3457789999999999999999999999999999986 67999999999974
No 134
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.30 E-value=0.0014 Score=69.18 Aligned_cols=58 Identities=24% Similarity=0.365 Sum_probs=0.0
Q ss_pred ccchhhcccCCeeEecCCCCHHHHHHHHHhCCCCeeeEecCCCCCCCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy15912 212 NITARIVKSHPVICLRPLETVGNIIDVLKATSHNGFPIVDVEPMTKHSSDGAEQSSAGSTDSHKGDTSHKRDSSHKGDAS 291 (482)
Q Consensus 212 ~l~a~dvM~~~~~~l~~~~~i~~~~~~l~~~~~~~fPVVd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (482)
..+++|+|.+++.++++++++.++++.|++++.+.+||||++
T Consensus 149 ~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~-------------------------------------- 190 (486)
T 2cu0_A 149 GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDER-------------------------------------- 190 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecC--------------------------------------
Confidence 457899999999999999999999999999999999999975
Q ss_pred CCCCCCeEEEEEeHHHHHHHH
Q psy15912 292 RKESPGRLVGLILRSQLIILI 312 (482)
Q Consensus 292 ~~~~~g~lvGiIs~~dL~~~l 312 (482)
++++|+|+.+|+++..
T Consensus 191 -----g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 191 -----GKLVGLITMSDLVARK 206 (486)
T ss_dssp ---------------------
T ss_pred -----CeEEEEEEHHHHHHhh
Confidence 6899999999987664
No 135
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=26.63 E-value=77 Score=24.23 Aligned_cols=26 Identities=15% Similarity=0.382 Sum_probs=22.0
Q ss_pred CCCEEEEECCCCeEEEEEeHHHhHHH
Q psy15912 437 GLRHVVVVNNNNHVVGMITRKDLARY 462 (482)
Q Consensus 437 ~lr~lpVVD~~g~lvGIITr~DLl~~ 462 (482)
..+.+=|+|++|.-+||+++.+-++.
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHH
Confidence 34567789999999999999999865
No 136
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=25.15 E-value=30 Score=31.68 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=18.8
Q ss_pred cCCCEEEEECCCCeEEEEEeHHHhH
Q psy15912 436 LGLRHVVVVNNNNHVVGMITRKDLA 460 (482)
Q Consensus 436 ~~lr~lpVVD~~g~lvGIITr~DLl 460 (482)
-|-..=||+|.+|+++||-|..|=.
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~~~ 148 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSNKQ 148 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC----
T ss_pred CCCCCCccCCCCCcEEEEEeccCCc
Confidence 4667789999999999999998844
Done!