RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15923
         (68 letters)



>d1oi2a_ c.119.1.2 (A:) Dihydroxyacetone kinase subunit K, DhaK
           {Escherichia coli [TaxId: 562]}
          Length = 347

 Score = 77.6 bits (191), Expect = 1e-19
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 2   DNQNGVLMIIANYTGDVLNFGIACEKVKAQGHAIEMVTVGEDCALLNTGRISLAGRRGMC 61
           D   GVL+II NYTGD+LNF  A E +   G  +  V + +D A+ ++     AGRRG+ 
Sbjct: 85  DGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYT--AGRRGVA 142

Query: 62  GIVFVIK 68
             V + K
Sbjct: 143 NTVLIEK 149


>d1un8a4 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citrobacter
           freundii [TaxId: 546]}
          Length = 335

 Score = 62.2 bits (151), Expect = 5e-14
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 5/67 (7%)

Query: 2   DNQNGVLMIIANYTGDVLNFGIACEKVKAQGHAIEMVTVGEDCALLNTGRISLAGRRGMC 61
             + G L+I+ NYTGD LNFG+A EK +  G+ +EM+ VG+D +L +         RG+ 
Sbjct: 99  TGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDNK-----HPRGIA 153

Query: 62  GIVFVIK 68
           G + V K
Sbjct: 154 GTILVHK 160


>d2nqca1 b.1.18.10 (A:2482-2578) Filamin C {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 97

 Score = 22.2 bits (47), Expect = 6.7
 Identities = 6/18 (33%), Positives = 7/18 (38%)

Query: 27 KVKAQGHAIEMVTVGEDC 44
           V A G  +E  T G   
Sbjct: 6  LVSAYGPGLEGGTTGVSS 23


>d2dica1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 98

 Score = 21.8 bits (46), Expect = 8.7
 Identities = 4/18 (22%), Positives = 9/18 (50%)

Query: 27 KVKAQGHAIEMVTVGEDC 44
          +V+AQG  ++     +  
Sbjct: 6  RVQAQGPGLKEAFTNKPN 23


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.142    0.420 

Gapped
Lambda     K      H
   0.267   0.0598    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 243,154
Number of extensions: 8406
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 4
Length of query: 68
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 31
Effective length of database: 1,899,586
Effective search space: 58887166
Effective search space used: 58887166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.2 bits)