BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15928
(485 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VCA5|SYFB_DROME Probable phenylalanine--tRNA ligase beta subunit OS=Drosophila
melanogaster GN=CG5706 PE=2 SV=1
Length = 589
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 157/239 (65%), Gaps = 40/239 (16%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
PLNKL++QLR +AQAGFTE LTF LCSRDD+ KL + ++ +PAVHIGNPKTLEFQ+ R
Sbjct: 390 PLNKLTEQLREQVAQAGFTEALTFTLCSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVR 449
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
TTL+PGLLKTL AN+KMPLPLKLFEISD+V D + EVGARN+R + AV NK+ GFE++
Sbjct: 450 TTLLPGLLKTLVANRKMPLPLKLFEISDVVVADESTEVGARNERRVCAVNCNKTAGFEVV 509
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
HGLLDRVMQLL +P G
Sbjct: 510 HGLLDRVMQLLSVPWKSASG---------------------------------------- 529
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
T+GY +QA ++ ++FP RCANVM G IG +GVLHP VL FELT PCS +E IEPF
Sbjct: 530 TKGYYLQATEDPSYFPGRCANVMYDGVVIGKIGVLHPTVLQAFELTTPCSAVEFTIEPF 588
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 160/236 (67%), Gaps = 26/236 (11%)
Query: 234 EINIEPFNFAKMLYSPFNSCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIIN 293
+I +P N K + F S TH+QLKQYLPIIR+SPVYPVI D N VVLSLPPIIN
Sbjct: 180 QIKFKPLNQTKEMTGSELMDFYS-THAQLKQYLPIIRESPVYPVIYDANRVVLSLPPIIN 238
Query: 294 SHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSAR 353
HS+I++ T+N+FIECTATD TKAK+VLDT+V +FS++C K+ VE C+V++ DG+
Sbjct: 239 GDHSKITLKTKNVFIECTATDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDVVQPDGSVIS 298
Query: 354 YPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMC 413
YPEL+VR+E ++VK+A YIGI E +K+A +LT+M
Sbjct: 299 YPELEVREERISVKRANAYIGI-----------------------DEPAEKLADMLTRMY 335
Query: 414 LQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQL 469
L+ K+ G L V IPPTRHD+IH CDIYED+AIAYGYNNI K++P F IA+Q
Sbjct: 336 LEAKV--DGDSLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKSLPAFMQIAKQF 389
>sp|Q9WUA2|SYFB_MOUSE Phenylalanine--tRNA ligase beta subunit OS=Mus musculus GN=Farsb
PE=2 SV=2
Length = 589
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 162/239 (67%), Gaps = 42/239 (17%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
PLNKL++ LR D+A AGFTE LTFALCS++D++ KL + AVHI NPKT EFQ+AR
Sbjct: 392 PLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVAR 451
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
TTL+PGLLKT+AAN+KMPLPLKLFEISD+V KD+ +VGA+N R+L AVYYNK+PGFEII
Sbjct: 452 TTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDSGKDVGAKNYRHLCAVYYNKTPGFEII 511
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
HGLLDR+MQLL +P P ++
Sbjct: 512 HGLLDRIMQLLDVP------------------------------------------PGEE 529
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
+ GY I+A+ + FFP RCA + + G IG +GVLHP+V+ KFELT+PCS LEINIEPF
Sbjct: 530 SGGYMIKASAGSAFFPGRCAEIFVGGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPF 588
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 151/236 (63%), Gaps = 24/236 (10%)
Query: 234 EINIEPFNFAKMLYSPFNSCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIIN 293
+I +P N K Y+ +T + LK YL II P+YPVI D NGVVLS+PPIIN
Sbjct: 180 DIKFKPLNKTKE-YTACELMNIYKTDNHLKHYLHIIESKPLYPVIYDSNGVVLSMPPIIN 238
Query: 294 SHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSAR 353
+HS+I+VNTRNIFIECT TD TKAKIVLD +VTMFS++CE+++ VE+ EV+ +G S+
Sbjct: 239 GNHSKITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEHCENQFTVEAVEVVSPNGKSST 298
Query: 354 YPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMC 413
+PEL RKE+V K +GI E+ +A LLT+MC
Sbjct: 299 FPELPYRKEMVRADLINKKVGI-----------------------RETPANLAKLLTRMC 335
Query: 414 LQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQL 469
L+++++G G ++ V IPPTR D+IH CDI ED AIAYGYNNI T+P+ +IA Q
Sbjct: 336 LKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQF 391
>sp|Q9NSD9|SYFB_HUMAN Phenylalanine--tRNA ligase beta subunit OS=Homo sapiens GN=FARSB
PE=1 SV=3
Length = 589
Score = 259 bits (661), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 160/239 (66%), Gaps = 42/239 (17%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
PLNKL++ LR D+A AGFTE LTFALCS++D++ KL + AVHI NPKT EFQ+AR
Sbjct: 392 PLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVAR 451
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
TTL+PGLLKT+AAN+KMPLPLKLFEISDIV KD+ +VGA+N R+L AVYYNK+PGFEII
Sbjct: 452 TTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEII 511
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
HGLLDR+MQLL +P + +G
Sbjct: 512 HGLLDRIMQLLDVPPGEDKG---------------------------------------- 531
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
GY I+A++ FFP RCA + RG +G +GVLHP+V+ KFELT+PCS LEIN+ PF
Sbjct: 532 --GYVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINVGPF 588
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 150/236 (63%), Gaps = 24/236 (10%)
Query: 234 EINIEPFNFAKMLYSPFNSCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIIN 293
+I +P N K Y+ +T + LK YL II + P+YPVI D NGVVLS+PPIIN
Sbjct: 180 DIKFKPLNKTKE-YTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIIN 238
Query: 294 SHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSAR 353
HSRI+VNTRNIFIECT TD TKAKIVLD +VTMFS+YCE+++ VE+ EV+ +G S
Sbjct: 239 GDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHT 298
Query: 354 YPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMC 413
+PEL RKE+V K +GI E+ + +A LLT+M
Sbjct: 299 FPELAYRKEMVRADLINKKVGI-----------------------RETPENLAKLLTRMY 335
Query: 414 LQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQL 469
L+++++G G ++ + IPPTR DIIH CDI ED AIAYGYNNI T+P+ +IA Q
Sbjct: 336 LKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQF 391
>sp|Q5R7F7|SYFB_PONAB Phenylalanine--tRNA ligase beta subunit OS=Pongo abelii GN=FARSB
PE=2 SV=1
Length = 589
Score = 254 bits (650), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 159/239 (66%), Gaps = 42/239 (17%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
PLNKL++ LR D+A AGFTE LTFALCS++D++ KL + AVHI +PKT EFQ+AR
Sbjct: 392 PLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISSPKTAEFQVAR 451
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
TTL+PGLLKT+AAN+KMPLPLKLFEISDIV KD+ +VGA+N R+L AVYYNK+PGFEII
Sbjct: 452 TTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEII 511
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
HGLLDR+MQLL + +P +
Sbjct: 512 HGLLDRIMQLLDV------------------------------------------LPGED 529
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
GY I+A++ FFP RCA + RG +G +GVLHP+V+ KFELT+PCS LEINI PF
Sbjct: 530 KGGYVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPF 588
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 150/236 (63%), Gaps = 24/236 (10%)
Query: 234 EINIEPFNFAKMLYSPFNSCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIIN 293
+I +P N K Y+ +T + LK YL II + P+YPVI D NGVVLS+PPIIN
Sbjct: 180 DIKFKPLNKTKE-YTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIIN 238
Query: 294 SHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSAR 353
HSRI+VNTRNIFIECT TD TKAKIVLD +VTMFS+YCE+++ VE+ EV+ +G S
Sbjct: 239 GDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHT 298
Query: 354 YPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMC 413
+PEL RKE+V K +GI E+ + +A LLT+M
Sbjct: 299 FPELAYRKEMVRADLINKKVGI-----------------------RETPENLAKLLTRMY 335
Query: 414 LQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQL 469
L+++++G G ++ + IPPTR DIIH CDI ED AIAYGY+NI T+P+ +IA Q
Sbjct: 336 LKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYSNIQMTLPKTYTIANQF 391
>sp|Q19713|SYFB_CAEEL Phenylalanine--tRNA ligase beta subunit OS=Caenorhabditis elegans
GN=frs-2 PE=1 SV=2
Length = 591
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 153/240 (63%), Gaps = 43/240 (17%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P+NKL D LR +IA AG+TE L FALCSRDD+S KLRQ AVHIGNPKTLEFQ+AR
Sbjct: 393 PINKLCDNLRIEIAAAGWTEALNFALCSRDDISSKLRQPDALSHAVHIGNPKTLEFQVAR 452
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
T+L+PGLLKTL++N+ MPLPLKLFE+ D++ KD+ +VGARN+R L AVYYN++ GFEII
Sbjct: 453 TSLLPGLLKTLSSNRDMPLPLKLFELQDVIVKDSNTDVGARNERRLAAVYYNRAAGFEII 512
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
G LDR+M++L + P
Sbjct: 513 QGFLDRIMRMLNVN------------------------------------------PARD 530
Query: 182 TEGYCIQAADNATFFPQRCANVM-LRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
GY I+A +N+T+FP RCA ++ +G +G +G LHPEV+ F LTLPC +EIN+EPF
Sbjct: 531 GTGYYIEADENSTYFPGRCAKIIGPKGVVLGHIGALHPEVITSFGLTLPCGAVEINVEPF 590
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 137/234 (58%), Gaps = 26/234 (11%)
Query: 234 EINIEPFNFAKMLYSPFNSCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIIN 293
+I +P N K Y+ T S LK YLPII++ PVYPVI D+NGVV S+PPIIN
Sbjct: 181 DIKFKPLNQTKE-YTAEELMTLYSTDSHLKAYLPIIQNHPVYPVIYDKNGVVCSMPPIIN 239
Query: 294 SHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSD-GTSA 352
HS+I++NT+N+FIE TATD KA +VLDT+VT+FSQYC + +E EV+ + G
Sbjct: 240 GEHSKITLNTKNVFIEATATDKQKAFVVLDTIVTLFSQYCAKPFTIEQVEVVYEETGVKE 299
Query: 353 RYPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKM 412
YP L R+ V + IGI KD +++A+LL KM
Sbjct: 300 LYPLLSYREMTVTTPEINTKIGINL------------KD-----------EEMATLLNKM 336
Query: 413 CLQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIA 466
L+ ++ + L + +PPTRHDI+H CDI ED+ +A+GYNN+ +P ++A
Sbjct: 337 SLKAEV-AAKETLKIVVPPTRHDILHACDIAEDVGVAFGYNNLITKLPESNTVA 389
>sp|O42849|SYFB_SCHPO Phenylalanine--tRNA ligase beta subunit OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=frs1 PE=3 SV=1
Length = 589
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 138/242 (57%), Gaps = 46/242 (19%)
Query: 3 LNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIART 62
+N+L+D +R ++A AG++EV+ F LCS D+ LR K +D AV + NPKTLEFQ+ R+
Sbjct: 383 VNRLADIIRNEVAYAGWSEVMPFILCSHDENYAWLR-KTDDSKAVQLANPKTLEFQVVRS 441
Query: 63 TLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIH 122
+L+PG+LKT+ NK LP+K+FE+SD+ + D + E RN+R+L A++ + GFE IH
Sbjct: 442 SLLPGILKTVRENKNHALPIKIFEVSDVAFCDYSRERMTRNERHLCAIFAGLNSGFEQIH 501
Query: 123 GLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKT 182
GLLDRVM +L R+M P D
Sbjct: 502 GLLDRVMLMLNT----------------------------------KRIMN----PKDSD 523
Query: 183 E-GYCIQAADNATFFPQRCANVMLR------GSKIGTMGVLHPEVLGKFELTLPCSILEI 235
GY I+A D++TFFP RCA V R G ++G GVLHP VL KFELT S +EI
Sbjct: 524 AVGYWIEAEDDSTFFPGRCAAVYYRKDFGTAGIRVGVFGVLHPLVLEKFELTSAASAVEI 583
Query: 236 NI 237
++
Sbjct: 584 DL 585
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 121/230 (52%), Gaps = 28/230 (12%)
Query: 234 EINIEPFNFAKMLYSPFNSCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIIN 293
EIN P N + + N + L +YL II +SP YPVI D V SLPPIIN
Sbjct: 167 EINFVPLNQTQEINGS-NLLEFYKDSKHLSRYLHIIANSPRYPVILDAKRRVCSLPPIIN 225
Query: 294 SHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVL-RSDGTSA 352
S S+ISV+TR+IFI+ TATD TK +IV++ + TMFS YCE+ + +E ++ +G +
Sbjct: 226 SEFSKISVDTRDIFIDVTATDKTKLEIVVNMMTTMFSCYCEEPFTIEPVNIISEHNGCTR 285
Query: 353 RYPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLC-FSESTDKVASLLTK 411
P L AD D LN C S D++ LLT+
Sbjct: 286 VTPNLN------------------------PTCFKADIDYLNEACGLSLPEDEICHLLTR 321
Query: 412 MCLQTKILGSGAE-LSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMP 460
M L K + ++ L V +PP R DI+H CDI ED+ IAYGY+N+ T P
Sbjct: 322 MMLTAKPNPNDSKTLLVYVPPLRADILHQCDIMEDLGIAYGYDNLKHTYP 371
>sp|Q550D2|SYFB_DICDI Phenylalanine--tRNA ligase beta subunit OS=Dictyostelium discoideum
GN=phesB PE=3 SV=2
Length = 617
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 131/215 (60%), Gaps = 24/215 (11%)
Query: 254 FSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTAT 313
F ++ S LK++LPII+DSPVYPVI D VV SLPPIIN HS+I ++T+N+FIE TA
Sbjct: 202 FYDESSSHLKKFLPIIKDSPVYPVIYDSKNVVCSLPPIINGEHSKIKLSTKNVFIEVTAN 261
Query: 314 DLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTS-ARYPELKVRKEVVNVKKATKY 372
D TKA IVL+T++TMFS+YC+ + +E EV+ +DG S YP+++ ++ + Y
Sbjct: 262 DRTKANIVLNTMLTMFSEYCKQPFTMEQVEVIDADGKSTGLYPQIQEKQ----INAQVDY 317
Query: 373 IGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPT 432
I + G + + + + +LL +M LQ+K+ + V +P T
Sbjct: 318 INKSAG-------------------INITPNDMVTLLKRMSLQSKLSDDEKSIIVDVPVT 358
Query: 433 RHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
R DI+H CDI ED+AI YGY+N+ K +P +I R
Sbjct: 359 RSDIMHACDIMEDVAIGYGYDNLKKEIPNCNTIGR 393
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 129/248 (52%), Gaps = 52/248 (20%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P+NKLS+ L +IA AGFTE++TF LC D L K +D +V I N + EF R
Sbjct: 396 PINKLSELLANEIALAGFTEIMTFVLCQNRDNFTAL-NKADDGSSVKISNAVSEEFTEVR 454
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDA------------TAEVGARNQRNLVA 109
T LV LLK+++ANK PLPLK+FEISD+ K + ++VGA N+R L A
Sbjct: 455 TNLVSTLLKSVSANKAAPLPLKMFEISDVSIKGSLGNKDLSDPNSNNSDVGAYNKRMLGA 514
Query: 110 VYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLD 169
+Y N+S E+IHGLLDR+M +L I LD T
Sbjct: 515 IYCNQSAKIEVIHGLLDRIMLVLDIKLDATRS---------------------------- 546
Query: 170 RVMQLLQIPLDKTEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLP 229
+GY ++ +++ F P NV++ G ++G MG++HP VL + + P
Sbjct: 547 -----------SNKGYYLELSNDKLFLPGTGINVIVNGKRVGHMGIVHPLVLKNYSCSFP 595
Query: 230 CSILEINI 237
C+ILE+ +
Sbjct: 596 CTILELEL 603
>sp|Q9SGE9|SYFB_ARATH Probable phenylalanine--tRNA ligase beta subunit OS=Arabidopsis
thaliana GN=At1g72550 PE=2 SV=1
Length = 598
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 142/237 (59%), Gaps = 36/237 (15%)
Query: 3 LNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDI-PAVHIGNPKTLEFQIAR 61
LN+L+D LR +IA +TEV+T+ LCS + L + ED+ AV +GNP++ +F+ R
Sbjct: 394 LNELTDLLRIEIAMCVYTEVVTWLLCSHKENFAMLNR--EDVNSAVIVGNPRSADFEAMR 451
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
L+PGLLKT+ N K P P+K+FEISD+V D + +VGA N+R+L A+Y + GFE+I
Sbjct: 452 RALMPGLLKTVGHNNKYPKPIKIFEISDVVMLDESKDVGASNRRHLAALYCGATSGFELI 511
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
HGL+DR+M+++ IP + ++ N +P+++
Sbjct: 512 HGLVDRIMEVMAIP--------------FLTIHEN-------------------NVPINE 538
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
+GY ++ + F P R A++++RG IG G++HPEVL F++ PCS LE++IE
Sbjct: 539 KDGYYVKLSQEPEFLPGRQASIIVRGKHIGNFGIVHPEVLNNFDIPDPCSYLELDIE 595
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 26/207 (12%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
++ +LK++L II +SPV+PV+ D VLSLPPIIN HS I++ T+N+FIECTATDLT
Sbjct: 203 KSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIINGAHSAITLQTKNVFIECTATDLT 262
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
KAKIVL+T+VT FS++C K+ +E EV DG S YP+L V V + T IG+
Sbjct: 263 KAKIVLNTMVTTFSEFCARKFEIEPVEVTYDDGKSYIYPDLAVYDMEVPLSFITDSIGV- 321
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSG---AELSVSIPPTR 433
S ++V SLLT+M LQ + S + V +PP+R
Sbjct: 322 ----------------------SLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPPSR 359
Query: 434 HDIIHTCDIYEDIAIAYGYNNIPKTMP 460
D++H CD+ ED+AIAYG+NNIP P
Sbjct: 360 SDVLHPCDVMEDVAIAYGFNNIPTRKP 386
>sp|O13432|SYFB_CANAX Phenylalanine--tRNA ligase beta subunit OS=Candida albicans GN=FRS1
PE=2 SV=3
Length = 592
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 136/247 (55%), Gaps = 44/247 (17%)
Query: 1 VPLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIA 60
+P+NK++D LR +QAG+ EV+ L S D+ L+QK + AV + NPKT+E+Q+
Sbjct: 382 LPVNKVADILRLASSQAGYLEVMPLTLSSHDENFAWLKQKDDGTKAVKLENPKTIEYQVV 441
Query: 61 RTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEI 120
RTTL+PG+LKT+ N+K LP+K+FE DIV K+ E GA NQRN A+Y K+ GFE+
Sbjct: 442 RTTLLPGILKTVKENRKHSLPIKVFECGDIVLKNPELERGAFNQRNWAALYVGKTSGFEM 501
Query: 121 IHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLD 180
+ GLL ++MQ ++ P + ++P D
Sbjct: 502 VQGLLGKIMQTMRTP-------------------WLENPS------------------KD 524
Query: 181 KTEGYCIQA-ADNATFFPQRCANVMLRGSK------IGTMGVLHPEVLGKFELTLPCSIL 233
+ GY I+ +N TFFP R A + R + IG++GVLHPEV+ F++ S +
Sbjct: 525 QRRGYWIEEDKENTTFFPGRGAKIYFRNADNAEAKAIGSIGVLHPEVMNNFDIPYAASSV 584
Query: 234 EINIEPF 240
EIN E F
Sbjct: 585 EINAEVF 591
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ + ++L II+DSPVYPV+ D N V SLPPIINS HS+I++NT+N++I+ T TD T
Sbjct: 190 EKDKNIGKFLHIIKDSPVYPVMLDANRTVASLPPIINSDHSKITLNTKNVWIDVTGTDRT 249
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARY-PELKVRKEVVNVKKATKYIGI 375
K +IV++ LV MFS+YC++ + +E +++ R P + R + +G+
Sbjct: 250 KTEIVINQLVAMFSRYCKEPFEIEPVQIISEHNNETRVCPNITPRTAKAEISYINSCVGL 309
Query: 376 TQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAE-LSVSIPPTRH 434
G+ +++ LL KM L + L V IP TR
Sbjct: 310 NYSGE-----------------------EISKLLKKMSLDATPSTEERDILDVKIPITRS 346
Query: 435 DIIHTCDIYEDIAIAYGYNNIPKTMPRFASI 465
DI+H CDI ED+AI YGY+N+ KT P+ S+
Sbjct: 347 DILHQCDIMEDVAIGYGYDNLKKTKPQAESL 377
>sp|P15624|SYFB_YEAST Phenylalanine--tRNA ligase beta subunit OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FRS1 PE=1 SV=3
Length = 595
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 132/247 (53%), Gaps = 43/247 (17%)
Query: 1 VPLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIA 60
+P+NK+SD R +QA + EVL LCS D+ LRQ AV + NPKTLE+Q+
Sbjct: 384 LPINKVSDIFRVASSQATWVEVLPLTLCSHDENFKFLRQSDNGDLAVKLANPKTLEYQVV 443
Query: 61 RTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEI 120
RTTL+PG+LKT+ N+K LP+K+FE D+V+KD E A N+R+ A+Y K+ GFEI
Sbjct: 444 RTTLLPGILKTVKENRKHSLPIKVFETGDVVFKDDKLERKAYNERHWAAIYVGKNSGFEI 503
Query: 121 IHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLD 180
I GLL ++MQ +TE +A Y + G
Sbjct: 504 IQGLLGKIMQTF-----RTE---------WIADYGAAASG-------------------- 529
Query: 181 KTEGYCIQAADNA-TFFPQRCANVMLRG------SKIGTMGVLHPEVLGKFELTLPCSIL 233
GY I+ D+ T+FP R A VM R +IG +GVLHPEV+ F++ S +
Sbjct: 530 --RGYWIEEDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNFDVPFAASFV 587
Query: 234 EINIEPF 240
E+N E F
Sbjct: 588 EVNAEVF 594
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 116/205 (56%), Gaps = 25/205 (12%)
Query: 255 SSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATD 314
S + + + +Y+ II DSPV+PVI D V SLPP+INS HS+ISVNTRNI I+ TATD
Sbjct: 189 SPEQKNNIGRYVHIIEDSPVFPVIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATD 248
Query: 315 LTKAKIVLDTLVTMFSQYCEDKYHVESCEVL-RSDGTSARYPELKVRKEVVNVKKATKYI 373
TKA+IVL+ L TMFS+YC++ + VE E++ +G S P R V++K +
Sbjct: 249 KTKAEIVLNILTTMFSRYCDEPFTVEPVEIVSEHNGQSRLAPNFNDRIMDVSIKYINSCL 308
Query: 374 GITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAE-LSVSIPPT 432
G+ Q S D++A L KM L + L V IP T
Sbjct: 309 GLDQ-----------------------SADEIAHCLKKMSLHAVQSKEDKDILHVDIPVT 345
Query: 433 RHDIIHTCDIYEDIAIAYGYNNIPK 457
R DI+H CDI ED A+ YG+NN+PK
Sbjct: 346 RPDILHACDIMEDAAVGYGFNNLPK 370
>sp|Q8SS40|SYFB_ENCCU Probable phenylalanine--tRNA ligase beta subunit OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU04_0900 PE=3 SV=1
Length = 557
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 112/238 (47%), Gaps = 54/238 (22%)
Query: 1 VPLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIA 60
+PLNK SD+LR +++ GF E LT L SR++ + Q AV + NPK+ +++
Sbjct: 364 IPLNKFSDKLRTELSIMGFDEALTLTLLSREENVIDGDQ------AVVLMNPKSASYEVC 417
Query: 61 RTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEI 120
RT+L+PGL+KT+A+N M +P +LFE+SD+V D E GA N R L A+Y +P E
Sbjct: 418 RTSLIPGLMKTVASNLHMKIPFRLFEVSDVVLLDKENECGASNSRRLAAMYCGHTPCLEE 477
Query: 121 IHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLD 180
+ G L +++ + Y N
Sbjct: 478 VQGSLSLLLKKCGV----RHSYSTHN---------------------------------- 499
Query: 181 KTEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
D+A + + A V++ + IG++GV +PE+ F + S EI++E
Sbjct: 500 ----------DSARYLKNQSALVIVEDAAIGSIGVCNPEICKTFRVPYAASFFEIDVE 547
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 30/210 (14%)
Query: 260 SQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKAK 319
S++ +Y+ +I + YP+ D G ++SLPPIINS ++IS T+N+F+E T TD +
Sbjct: 185 SKIGRYMRLIEKNEKYPLFEDSMGTIMSLPPIINSDATKISPGTKNVFVEMTGTDFHRVN 244
Query: 320 IVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQGG 379
L L+ F +ES E+ R+ R P + R V+ + + + +G+
Sbjct: 245 TALKLLLGCFRG-----RKIESVEI-RNGNERTRTPVMHNRSYVMGLGEINRSLGL---- 294
Query: 380 QSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDIIHT 439
D +SA K + + S T ++ L V + R D++H
Sbjct: 295 ---DLSLSAAKSYMERMMHSVDTIDEST-----------------LRVRVHDIRSDVLHK 334
Query: 440 CDIYEDIAIAYGYNNIPKTMPRFASIARQL 469
CD+ EDIAIA+G+NN + +P F + ++
Sbjct: 335 CDLIEDIAIAHGFNNFRRELPSFFTAGSEI 364
>sp|Q8U260|SYFB_PYRFU Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pheT
PE=3 SV=1
Length = 556
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 33/214 (15%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHS-RISVNTRNIFIECTATDL 315
+ H + ++Y +IRD P YP++ D G VLS+PPIINS + R++ T+N+F++ T DL
Sbjct: 181 EKHEKGREYGHLIRDKPYYPLLVDSEGNVLSMPPIINSELTGRVTTETKNVFVDVTGWDL 240
Query: 316 TKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGI 375
K + L+ +VT E ++ +V+ YP+ + I
Sbjct: 241 RKVMLALNVIVTAL---AERGGKIKRVKVI--------YPDFE----------------I 273
Query: 376 TQGGQSPDQ-DVSADK-DPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTR 433
T +P + +VS + L+GL S +++ LL +M + +IL S + V P R
Sbjct: 274 TTPDLTPKEFEVSFEYIRKLSGLEL--SNEEIKELLERMMYEVEIL-SENKAKVKYPAFR 330
Query: 434 HDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
DI+HT D+ ED+ IAYGYNNI P+ A R
Sbjct: 331 DDIMHTRDVLEDVLIAYGYNNIDPEEPKLAVQGR 364
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 92/239 (38%), Gaps = 51/239 (21%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P D +R + G EV+TF L S++ K+ E+I V I NP + + R
Sbjct: 367 PFKDFEDAIRDLMVGFGLQEVMTFNLTSKEVQFDKMNIPEEEI--VEIANPISSRWSALR 424
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
L+P L++ L+ N P ++FE+ D + E ++ L
Sbjct: 425 KWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTVSEPKLAVALAGS------- 477
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
GY N + + LD +M+ L I
Sbjct: 478 -------------------GYTFTNAKEI-----------------LDSLMRHLGIE--- 498
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
Y I+ + +F P R +++ G +IG +G +HP+VL + + +P EI ++P
Sbjct: 499 ---YDIEETVHGSFIPGRVGKILVDGKEIGIIGEIHPQVLENWNIQVPVVAFEIFLKPL 554
>sp|Q2NGX9|SYFB_METST Phenylalanine--tRNA ligase beta subunit OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=pheT PE=3 SV=1
Length = 559
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 27/210 (12%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + ++Y ++++ YP+I D NG ++S+PPIINS ++++ T N+FI+ T TD+
Sbjct: 177 ENHEKGEKYAKLLKEFDKYPLIVDGNGNIMSMPPIINSELTKLTTKTTNLFIDVTGTDIN 236
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
L+ + S E+ +E+ EV + YP+ + + V+ K A +YIGI
Sbjct: 237 AVTNALNIIAANLS---ENGATIETIEVNYPYHDNKTYPDFEPKIIDVHTKTAQEYIGI- 292
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
D++ADK E+ +K TK+ +T + V++P R DI
Sbjct: 293 --------DLTADK-------IVETLEKTRFNATKINEET--------VRVTVPRYRIDI 329
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPRFASIA 466
+H DI E+IA+ YG+N +P +P FA++A
Sbjct: 330 LHEVDIIENIALGYGFNELPAQLPDFATVA 359
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 57/225 (25%)
Query: 18 GFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANKK 77
FTE+ + L S KLR+++E+ V + P T + + R +L+ LL+ L NK
Sbjct: 379 SFTEIKSLMLTSETQHYTKLRKEVEE-DRVTVAQPITQDRTMIRKSLINSLLEFLEDNKH 437
Query: 78 MPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLD 137
LP K+FEI D+ Y + AE + L A + F I ++
Sbjct: 438 EELPQKIFEIGDVAYINENAETKMVTVKKLAAAQISSVANFTTIKSIV------------ 485
Query: 138 KTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNATFFP 197
E + A + GFE M+L + D++ F
Sbjct: 486 --ESFVA-------------NMGFE---------MEL-------------EDHDDSAFIK 508
Query: 198 QRCANVMLRG-------SKIGTMGVLHPEVLGKFELTLPCSILEI 235
RCA + + G G +HPEVL FEL P E+
Sbjct: 509 GRCAKFTTKPLNKNTPFTFKGYFGEIHPEVLTNFELEYPVIAFEV 553
>sp|Q76KA7|SYFB_PYRKO Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pheT PE=1
SV=1
Length = 574
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 38/221 (17%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHS-RISVNTRNIFIECTATDL 315
+ H + ++Y +I+D P YP++ D G VLS+PP+INS + R++ T+N+F++ T DL
Sbjct: 181 EKHEKGREYGHLIKDKPYYPLLVDSEGKVLSMPPVINSETTGRVTTETKNVFVDITGWDL 240
Query: 316 TKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGI 375
K + L+ +VT + E ++S +V+ YP+ ++
Sbjct: 241 NKVMLALNVVVTALA---ERGGKIKSVKVV--------YPDFEI---------------- 273
Query: 376 TQGGQSPD---QDVSADKDPLNGLCFSESTD-KVASLLTKMCLQTKILGSGAELSVSIPP 431
++PD ++ + D + L E +D ++ LL +M + ++ A+L P
Sbjct: 274 ----ETPDLTPKEFEVELDYIRKLAGLELSDGEIKELLERMMYEVELENRRAKLRY--PA 327
Query: 432 TRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQLFFI 472
R DI+H D+ ED+ IAYGYN I P+ A R FI
Sbjct: 328 FRDDIMHARDVLEDVLIAYGYNEIEPEEPKLAVQGRGDKFI 368
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 92/249 (36%), Gaps = 62/249 (24%)
Query: 5 KLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKL-----------RQKMEDIPA--VHIGN 51
+ D +R + G EV+TF L +R+ ++ R PA V I N
Sbjct: 369 EFEDAVRELMVGFGLQEVMTFNLTNREAQYDRMNLPCGEHQEECRDYFNHPPAELVEIEN 428
Query: 52 PKTLEFQIARTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVY 111
P + ++ R L+P LL L+ N P KLFE+ D + E ++ L
Sbjct: 429 PISPKWSALRNWLIPSLLDFLSQNTHEEYPQKLFEVGKATLIDESRETKTVSESKLAVAL 488
Query: 112 YNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRV 171
+ F +L+ VM+ L GFE
Sbjct: 489 AHPRVTFTEAKEILEGVMRHL---------------------------GFE--------- 512
Query: 172 MQLLQIPLDKTEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCS 231
Y ++ A++ +F P R +++ G IG +G +HP VL + + +P +
Sbjct: 513 -------------YELEEAEHPSFIPGRVGKIIVNGETIGVIGEIHPAVLENWGIEMPVA 559
Query: 232 ILEINIEPF 240
E+ + P
Sbjct: 560 AFELFLAPL 568
>sp|B6YTJ3|SYFB_THEON Phenylalanine--tRNA ligase beta subunit OS=Thermococcus onnurineus
(strain NA1) GN=pheT PE=3 SV=1
Length = 572
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHS-RISVNTRNIFIECTATDL 315
+ H + K+Y +I+D P YP++ D G VLS+PPIINS + R++ TRN+F++ T DL
Sbjct: 181 EKHEKGKEYGHLIKDKPYYPLLVDSEGNVLSMPPIINSELTGRVTTETRNVFVDVTGWDL 240
Query: 316 TKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGI 375
K + L+ +VT E ++S +V+ D P L ++ V + + GI
Sbjct: 241 NKIMLALNVVVTAL---AERGGKIKSVKVVYGD-FEIETPNLTPKEFEVEFEYIRRLAGI 296
Query: 376 TQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHD 435
S +++ LL +M + ++ A+L P R D
Sbjct: 297 DL-----------------------SDEEIKELLERMFYEVELENGKAKLKY--PAFRDD 331
Query: 436 IIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQLFFI 472
I+H D+ ED+ IAYGYN I P+ A R F+
Sbjct: 332 IMHARDVLEDVLIAYGYNEIKPEEPKLAVQGRGDKFV 368
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 91/247 (36%), Gaps = 60/247 (24%)
Query: 5 KLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIP-----------AVHIGNPK 53
+ D +R + G EV+TF L +R+ K+ + P V I NP
Sbjct: 369 EFEDTVRELMVGYGLQEVMTFNLTNREAQYTKMNLDFGEHPFEEYGHHPPARLVEIENPI 428
Query: 54 TLEFQIARTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYN 113
+ ++ R L+P L++ L+ N P ++FE+ + E ++ L +
Sbjct: 429 SPKWSALRAWLIPSLMEFLSQNTHEEYPQRIFEVGKTTLINENKETKTVSESKLAVAIAH 488
Query: 114 KSPGFEIIHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQ 173
F + +LD VM L G E
Sbjct: 489 PRVTFTEVKEILDSVMHHL---------------------------GLE----------- 510
Query: 174 LLQIPLDKTEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSIL 233
Y ++ ++ +F P R +++ G ++G +G +HP+VL + + +P +
Sbjct: 511 -----------YELKEIEHNSFIPGRVGKIIVNGQEVGIIGEIHPKVLENWGIEMPVAAF 559
Query: 234 EINIEPF 240
E+ + P
Sbjct: 560 EVFLRPL 566
>sp|O26864|SYFB_METTH Phenylalanine--tRNA ligase beta subunit OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pheT PE=1 SV=2
Length = 549
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 247 YSPFNSCFSSQTHSQLKQ------YLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRIS 300
++P +S H L++ Y ++RD YP+ITD+NG VLS+PPIIN ++++
Sbjct: 160 FTPLDSVCEMTPHEILEEHPKGVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLT 219
Query: 301 VNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVR 360
VNTR I ++ T TD + V TL + + + E + S V R DG P+L R
Sbjct: 220 VNTRRILVDVTGTD---DRAVRQTLNIICTSFAEAGGRIGSVRVKRPDG-ELHLPDLTPR 275
Query: 361 KEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILG 420
+ V+V +A++ G+ S D+V LL K + +
Sbjct: 276 EMRVSVSEASRITGLEL-----------------------SADEVMDLLMKARMDAR-RT 311
Query: 421 SGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
S E+ IP R DI+H D+ E+IA+ + I +P A+IA +
Sbjct: 312 SDDEVVAVIPAYRVDILHEVDLVENIAVQHCIGRIEPELPDIATIAEE 359
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 89/222 (40%), Gaps = 54/222 (24%)
Query: 18 GFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANKK 77
GF EV++ L S + S R ++E+ V + P + + + R +L+ GLL+ NK
Sbjct: 377 GFQEVMSLMLTSEE--SHYRRMRLEEDERVEVAQPISQDRTMIRKSLLNGLLEFFEDNKH 434
Query: 78 MPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLD 137
LP K+FE+ D+VY + +E +R L + S GF I L V++ L
Sbjct: 435 EDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKSLAAAVVENL----- 489
Query: 138 KTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNATFFP 197
G+E + I+ ++ +F
Sbjct: 490 ----------------------GYE----------------------FRIEPLEHPSFIE 505
Query: 198 QRCANVMLRG--SKIGT-MGVLHPEVLGKFELTLPCSILEIN 236
RCA + G S IG G +HPEV+ F L P LEI
Sbjct: 506 GRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALEIE 547
>sp|A7I615|SYFB_METB6 Phenylalanine--tRNA ligase beta subunit OS=Methanoregula boonei
(strain 6A8) GN=pheT PE=3 SV=1
Length = 542
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 32/212 (15%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + + Y I++D P++P+I D V S PPIIN +R++ T+NI ++ T TD
Sbjct: 174 EKHPKGRDYAKIVKDFPLFPLIVDNEDHVCSFPPIINGERTRVTTATKNILLDVTGTDQR 233
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ + + T + E +ES E+ A +P+L V+V++ + IG+
Sbjct: 234 AVNVAANIICTALA---EAGATIESVEI-----NGAPFPDLAPAVRTVSVRECSALIGV- 284
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
D++A ++A LL KM + G ++ V +P R DI
Sbjct: 285 --------DLTA--------------PQMAELLEKMRFGAEPAGPD-QVRVQVPCYRADI 321
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
+H D++ED+AIAYGY N +P SI ++
Sbjct: 322 MHDWDLFEDVAIAYGYENFAVEVPPTFSIGKE 353
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 59/237 (24%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPA-VHIGNPKTLEFQIA 60
P N+++ Q R +A G+ E++ F L + + ++++ E PA + + +P + E+ +
Sbjct: 355 PANRIAGQARAILAGLGYLEMMPFTLTNERVLCDRMQRPGE--PATLRLMHPISEEYTVV 412
Query: 61 RTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEI 120
RT +VP LL+ L N+ LP +LF D+
Sbjct: 413 RTDIVPLLLEMLQVNRHRELPQRLFATGDV------------------------------ 442
Query: 121 IHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLD 180
+ LL + L V + F + D V++ L +
Sbjct: 443 -------IADLL-------------TTQRLAFVSTHAGADFSEAYAHADAVLRELGV--- 479
Query: 181 KTEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
Y + +D+A F R A++++ G K G G +HP VL FEL P + E+++
Sbjct: 480 ---AYSAEVSDDAAFIEGRRADIIVGGKKAGVFGEIHPAVLTAFELEQPVAAFELDL 533
>sp|O73984|SYFB_PYRHO Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pheT PE=1 SV=1
Length = 556
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 30/212 (14%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHS-RISVNTRNIFIECTATDL 315
+ H + ++Y +I+D YP++ D G VLS+PPIINS + R++ +T+N+FI+ T L
Sbjct: 181 EKHEKGREYGHLIKDKQFYPLLIDSEGNVLSMPPIINSEFTGRVTTDTKNVFIDVTGWKL 240
Query: 316 TKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGI 375
K + L+ +VT E + S V+ D P+L ++ V + K
Sbjct: 241 EKVMLALNVMVTAL---AERGGKIRSVRVVYKD-FEIETPDLTPKEFEVELDYIRK---- 292
Query: 376 TQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHD 435
L+GL ++ ++ LL KM + +I A+L P R D
Sbjct: 293 -----------------LSGLELNDG--EIKELLEKMMYEVEISRGRAKLKY--PAFRDD 331
Query: 436 IIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
I+H DI ED+ IAYGYNNI P+ A R
Sbjct: 332 IMHARDILEDVLIAYGYNNIEPEEPKLAVQGR 363
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 90/239 (37%), Gaps = 51/239 (21%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P D +R + G EV+TF L +++ K+ E+I V I NP + + R
Sbjct: 366 PFKDFEDAIRDLMVGFGLQEVMTFNLTNKEVQFKKMNIPEEEI--VEIANPISQRWSALR 423
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
++P L++ L+ N P ++FE+ D + E ++ L F
Sbjct: 424 KWILPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTVSEPKLAVALAGTGYTFTNA 483
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
+LD +M+ L GFE
Sbjct: 484 KEILDALMRHL---------------------------GFE------------------- 497
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
Y I+ ++ +F P R +++ G IG +G +HP+VL + + +P EI + P
Sbjct: 498 ---YEIEEVEHGSFIPGRAGKIIVNGRDIGIIGEVHPQVLENWNIEVPVVAFEIFLRPL 553
>sp|Q12YP2|SYFB_METBU Phenylalanine--tRNA ligase beta subunit OS=Methanococcoides
burtonii (strain DSM 6242) GN=pheT PE=3 SV=1
Length = 540
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 109/242 (45%), Gaps = 38/242 (15%)
Query: 236 NIEP----------FNFAKMLYS-PFNSCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGV 284
NIEP F F + ++ P + H + ++ I+ YP+ITD G
Sbjct: 142 NIEPPFKYQAVSPDFEFVPLDFTEPMTMDEVLEKHPKGVRFANILEGMEKYPLITDSEGK 201
Query: 285 VLSLPPIINSHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEV 344
VLS PPIIN +R+ +T ++FI+ T V L + S E +ES +V
Sbjct: 202 VLSFPPIINGTLTRVEESTTDLFIDVTGL----GDAVYTALSIVVSALAERGGKIESVKV 257
Query: 345 LRSDGTSARYPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDK 404
+ DGT P++ R +NV ++ D D L G+ ++ D+
Sbjct: 258 VYPDGTEKVTPDMTPR--TLNVPRS-------------------DIDSLIGIKLTD--DE 294
Query: 405 VASLLTKMCLQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFAS 464
+ + L +M +L G +S+P R DI+H DI EDIAI YG++ I P+ A+
Sbjct: 295 IINELKRMRFDASVLEDGDMFEISVPTYRADILHNFDIVEDIAIGYGFDKIKSEFPKSAT 354
Query: 465 IA 466
I
Sbjct: 355 IG 356
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 57/236 (24%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P++ +R + G++EV+ F L S+ V + + E + +P + + + R
Sbjct: 360 PISVTRGVMREIMVSLGYSEVMPFTLTSQK-VHFEWMNREETDDVTFVLHPISEDQTMVR 418
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
TT++P L++ + N+ LP +LFE+ ++V V ++N+ +L A + F I
Sbjct: 419 TTILPNLIEIFSLNQHHELPQRLFEVGEVV-------VNSKNRLHLAAASIHAQANFTEI 471
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
+LD VM+ +R++
Sbjct: 472 REVLDAVMR----------------ERDI------------------------------- 484
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
Y + +++ F R A++++ G K+G MG L+PEV+ F L P EI++
Sbjct: 485 --EYEVVVSEDPAFIEGRRADILVNGEKVGMMGELYPEVIINFGLGQPIVGFEIDL 538
>sp|C5A5Z0|SYFB_THEGJ Phenylalanine--tRNA ligase beta subunit OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=pheT PE=3 SV=1
Length = 568
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 259 HSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHS-RISVNTRNIFIECTATDLTK 317
H + ++Y +I+D P YP++ D G VLS+PPIINS + R++ TRN+F++ T DL K
Sbjct: 183 HEKGREYGHLIKDKPYYPLLVDSEGKVLSMPPIINSETTGRVTTETRNVFVDVTGWDLNK 242
Query: 318 AKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQ 377
+ L+ +VT + E ++S +V+ YP+ ++ + K + +
Sbjct: 243 VMLALNVVVTALA---ERGGRIKSVKVV--------YPDFEIETPNLTPKSFEVELDYIR 291
Query: 378 GGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDII 437
L GL S+ ++ LL +M + A+L P R DI+
Sbjct: 292 --------------KLAGLDLSDG--EIKDLLERMMYDVTLEDGKAKL--LYPAFRDDIM 333
Query: 438 HTCDIYEDIAIAYGYNNIPKTMPRFASIARQLFFI 472
H D+ ED+ IAYGYN I P+ A R FI
Sbjct: 334 HARDVLEDVLIAYGYNEIEPEEPKLAVQGRGDKFI 368
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 94/243 (38%), Gaps = 56/243 (23%)
Query: 5 KLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKL-----RQKMEDIPA--VHIGNPKTLEF 57
+ D +R + G EV+TF L +R+ K+ R + PA V I NP + ++
Sbjct: 369 EFEDAVRELMVGFGLQEVMTFNLTNREAQYGKMNLEYGRDYFNNPPAELVEIENPISPKW 428
Query: 58 QIARTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPG 117
R L+P LL L+ N P +LFE+ D + E ++ L V
Sbjct: 429 SALRNWLLPSLLDFLSQNTHEEYPQRLFEVGKATLIDESRETKTVSESKLAVVLAQPRVT 488
Query: 118 FEIIHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQI 177
F +LD VM+ L GFE
Sbjct: 489 FTDTKEILDSVMRHL---------------------------GFE--------------- 506
Query: 178 PLDKTEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
Y ++ ++ +F P R V+++G IG +G +HP VL K+ + +P + E+ +
Sbjct: 507 -------YELEEVEHPSFIPGRVGKVIVKGKAIGVIGEIHPSVLEKWGIEMPVAGFELFL 559
Query: 238 EPF 240
P
Sbjct: 560 RPL 562
>sp|B8GEX4|SYFB_METPE Phenylalanine--tRNA ligase beta subunit OS=Methanosphaerula
palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
GN=pheT PE=3 SV=1
Length = 546
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 44/243 (18%)
Query: 238 EPFNFAKMLYSPFNSCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHS 297
EP +ML H + + Y ++R+ P YP+I D V S PPIIN +
Sbjct: 165 EPMTMEQML----------DEHPKGRAYAHLVREHPRYPLIVDAEDRVCSFPPIINGDLT 214
Query: 298 RISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPEL 357
R++ T+NI ++ T TD ++ T+ + + E VES + DG + P+L
Sbjct: 215 RVTTETKNILLDTTGTDQRAVEV---TVKIVCAALVEAGGTVESVTI---DGVES--PDL 266
Query: 358 KVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTK 417
V+V + K +G+ S + ++A+LL KM +
Sbjct: 267 SPSVRTVSVDEGNKLLGL-----------------------SLTAPEMATLLEKMRFKAT 303
Query: 418 ILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQLFFIFTCLG 477
G+ + V +P R DI+H DI+ED+A+AYGY N T+P ++I Q + +G
Sbjct: 304 PDGTD-RIRVEVPCYRADIMHDWDIFEDVAVAYGYENFDATLPETSTIGEQ--SQVSVIG 360
Query: 478 GVV 480
G V
Sbjct: 361 GAV 363
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 57/220 (25%)
Query: 18 GFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANKK 77
G+ EV+ F L S + V+ L Q+ A+H+ +P T + I RT L+P LL+ L N+
Sbjct: 371 GYHEVMPFTLTS-ETVTYDLMQRERSPTALHLLHPITEDQTIVRTDLLPLLLELLQMNRY 429
Query: 78 MPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLD 137
LP ++F D+V G + AV + + F
Sbjct: 430 RELPQRIFCTGDVVE-------GISTHQKAAAVSCHGAADF------------------- 463
Query: 138 KTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNATFFP 197
+E Y A D + + L +P Y + + F
Sbjct: 464 -SEAYAA-----------------------ADALCRDLNLP------YTTAESTDPAFID 493
Query: 198 QRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
R ++++ G+ +G G + P V+ FEL P + +E+++
Sbjct: 494 GRRGDIIVDGTTVGVFGEISPRVILGFELDHPIAAVELDL 533
>sp|Q2FLL1|SYFB_METHJ Phenylalanine--tRNA ligase beta subunit OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=pheT PE=3 SV=1
Length = 545
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 40/208 (19%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATD-- 314
+ H + + Y I++D PV P+I D NG VLS PPIIN +R++ +++N+ ++ T TD
Sbjct: 174 EEHPKGRDYSHIVKDKPVMPLIEDANGNVLSFPPIINGELTRVTESSKNLLLDVTGTDER 233
Query: 315 --LTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKY 372
+T +++ TL+T + CE + +G P+L +NV K
Sbjct: 234 AVMTALRVLCTTLITAGGR----------CESVTVNGVV--MPDLSPALRNINVTSCNKL 281
Query: 373 IGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPT 432
+G S S D++A++L KM + G + +S+ IP
Sbjct: 282 LGT-----------------------SFSADEIATILKKMRYGAEKSGD-STVSIRIPCY 317
Query: 433 RHDIIHTCDIYEDIAIAYGYNNIPKTMP 460
R DI+H D+YED+AI G+ N+ +P
Sbjct: 318 RADIMHEWDVYEDVAIGAGFGNLEAELP 345
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 57/236 (24%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P+ L+ +R + G+ EV+ F L S +DV Q+ D A+H+ +P + E + R
Sbjct: 355 PIIALASAIRDICSGLGYLEVMPFTL-SNEDVMYTRMQREPDPKALHVLHPISEEQTLVR 413
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
T L+P LL L NK+ LP ++F D+V
Sbjct: 414 TDLLPLLLDLLRMNKRRELPQRIFHTGDVVSS---------------------------- 445
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
MQ Q L + F + D +M+ L I
Sbjct: 446 -------MQTYQ---------------KLALASTHPGADFSEAYATTDALMRELGI---- 479
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
Y + + F P R ++M+ G K+G G +HP VL KF++ P +EI++
Sbjct: 480 --SYLPAESADPAFIPGRAVDIMVDGKKMGVFGEIHPGVLNKFDIDQPVIGIEIDL 533
>sp|Q9UYX2|SYFB_PYRAB Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=pheT PE=3 SV=1
Length = 556
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 259 HSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHS-RISVNTRNIFIECTATDLTK 317
H + +Y +I+D P YP++ D G VLS+PPIINS + R++ T+ +FI+ T DL K
Sbjct: 183 HEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDLKK 242
Query: 318 AKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQ 377
+ L+ +VT E + S +V+ D P+L ++ V + K
Sbjct: 243 VMLALNVMVTAL---AERGGKIRSVKVIYKDFEIVT-PDLTPKRFEVELNYIRK------ 292
Query: 378 GGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDII 437
L+GL + +++ LL +M ++ A+L P R DI+
Sbjct: 293 ---------------LSGLDLKD--EEIKELLERMMYSVELEDGKAKLLY--PAFRDDIM 333
Query: 438 HTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
H D+ ED+ IAYGYNNI P+ A R
Sbjct: 334 HARDVLEDVLIAYGYNNIEPEEPKLAVQGR 363
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 91/248 (36%), Gaps = 57/248 (22%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P D +R + G E++TF L +++ K+ E+I V I NP + + R
Sbjct: 366 PFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEI--VEIANPVSQRWSALR 423
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
L+P L++ L+ N P ++FE+ D + E ++ L F
Sbjct: 424 KWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNA 483
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
+LD +M+ L +
Sbjct: 484 KEILDSLMRHLGVE---------------------------------------------- 497
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPFN 241
Y I+ ++ +F R V++ G ++G +G +HP+VL + + +P EI + P
Sbjct: 498 ---YEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRP-- 552
Query: 242 FAKMLYSP 249
LY P
Sbjct: 553 ----LYQP 556
>sp|A2ST82|SYFB_METLZ Phenylalanine--tRNA ligase beta subunit OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pheT
PE=3 SV=1
Length = 540
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 32/202 (15%)
Query: 259 HSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKA 318
H + K Y I+ + +P+ITD G V S PPIIN +R++ +T+NI ++ T +
Sbjct: 176 HPKGKAYARIVEEFERFPLITDAKGRVCSFPPIINGELTRVTEDTQNILLDVTGIEPRAV 235
Query: 319 KIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQG 378
+ + L F E +ES E+ DG + P+L+ K V+V + +K GI
Sbjct: 236 SVAVKILCAAF---VEMGAEIESVEI---DGVVS--PDLRPEKRTVSVSECSKLTGI--- 284
Query: 379 GQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDIIH 438
P+ + ++ LL KM +++ +SV IP R DI+H
Sbjct: 285 -------------PM-------TASQMTELLMKMRFGAEVIDEDT-VSVDIPCYRADIMH 323
Query: 439 TCDIYEDIAIAYGYNNIPKTMP 460
D+YED AIAYGY+ I ++P
Sbjct: 324 DHDVYEDAAIAYGYDKIETSLP 345
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 57/239 (23%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P+ KL +R + + E F L S DVS L + E+ A+H+ +P + + I R
Sbjct: 355 PVQKLYSLVRNIMVGLSYIENTPFTLTS-GDVSYSLMHRPENPAALHVLHPISEDQTIIR 413
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
T ++P L+++L+ N+ LP K+F D+V NLV Y K
Sbjct: 414 TDILPLLMESLSINRSRELPQKIFACGDVV-------------ENLVT--YPK------- 451
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
+ A + S F I+ ++D +++ I
Sbjct: 452 ----------------------------MAAASIHTSADFSEIYAVMDAFCRMMSIE--- 480
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
Y ++ + + F P R ++ + G KIG G ++P+VL F L EI++ F
Sbjct: 481 ---YEVRDSADDAFIPGRRGDIYVSGEKIGVFGEINPDVLVGFGLEHQAVAFEIDLRGF 536
>sp|C4VA52|SYFB_NOSCE Probable phenylalanine--tRNA ligase beta subunit OS=Nosema ceranae
(strain BRL01) GN=NCER_101490 PE=3 SV=1
Length = 504
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 33/208 (15%)
Query: 261 QLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKAKI 320
+ +YL + D+ Y V D G +LS+PP+INS+ ++ISVNT NI +E T T+ K
Sbjct: 183 NIGKYLQYV-DNDNYIVFMDAKGHILSVPPVINSNRTKISVNTTNILVEVTGTNTYKVNT 241
Query: 321 VLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQGGQ 380
L +++ F R+D + + ++E++ +K + + I + +
Sbjct: 242 CLKMILSAF----------------RTDNM-CQVNIISDKQEILEIKDKSYLLSIDEVYK 284
Query: 381 SPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDIIHTC 440
+ ++S ++ LL KM +T I+ L+V++P R D++H
Sbjct: 285 ELNINISV--------------IDLSDLLIKMMYKTNII-DDKHLNVTVPSVRQDVLHKA 329
Query: 441 DIYEDIAIAYGYNNIPKTMPRFASIARQ 468
D+ EDIAI YG+NNI MP +I +
Sbjct: 330 DLIEDIAICYGFNNINMVMPDINTIGSE 357
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 3 LNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIART 62
LNK SD+LR ++ GFTEV T L S+ D D AV + N K+LE + R+
Sbjct: 360 LNKFSDKLRLEMCMLGFTEVYTMVLVSKSD------NIFGDNSAV-VSNYKSLECEAVRS 412
Query: 63 TLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIH 122
+L PGL+K +++N +P+K+FE+ D+V+ D+ ++VGARN+R L +Y E +
Sbjct: 413 SLYPGLMKAVSSNLHCKIPIKIFEVGDVVFLDSESDVGARNRRYLSCLYVGNKSHLEDVQ 472
Query: 123 GLLDRVMQ 130
G + +++
Sbjct: 473 GPMTVILE 480
>sp|O28848|SYFB_ARCFU Phenylalanine--tRNA ligase beta subunit OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pheT PE=3 SV=1
Length = 547
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 96/212 (45%), Gaps = 32/212 (15%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + K Y I+ YP+I D V+S PPIIN+ +R++ T ++FI+ T D
Sbjct: 174 EEHPKGKAYAFILEGKDSYPMIVDSKDEVISFPPIINAEKTRVTEETTDLFIDVTGFDEN 233
Query: 317 KAKIVLDTLVTMFSQYCEDKY-HVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGI 375
+D + + + D+ +ES EV+ D P L VR V+V + +G+
Sbjct: 234 -----VDRAIAILACMLADRGGRIESVEVVYPDHVELT-PNLDVRFMEVDVDEVNSLLGL 287
Query: 376 TQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHD 435
S S +++ L KM +I G +L V IPP R D
Sbjct: 288 -----------------------SLSAEEIKESLEKMRFSCEI--EGEKLKVGIPPYRAD 322
Query: 436 IIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
I+H D+ ED+AI YGY NI +P + R
Sbjct: 323 IMHEWDVIEDVAIGYGYENITPEIPPTLTFGR 354
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 63/243 (25%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMED----IPAVHIGNPKTLEF 57
P N + + + GFTEV+TF L + + K+R+K E +P +H P T E
Sbjct: 357 PWNDIRSLAKEIMIGLGFTEVITFTLTNEAVMYEKMRRKGEPWKDYVPVMH---PLTTEH 413
Query: 58 QIARTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPG 117
I RT+L+P LL+ L+ NK +P +FE+ D+V V ++N+ +L A +
Sbjct: 414 TILRTSLLPKLLELLSYNKHHEMPQMVFEVGDVV-------VNSKNRLHLAACITHSRAN 466
Query: 118 FEIIHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQI 177
F I + VM+ L +
Sbjct: 467 FSEIRSYVQAVMRELDLT------------------------------------------ 484
Query: 178 PLDKTEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
+ ++ +D+ F R A +++ G +G G +HPEVL FELT+P S EI++
Sbjct: 485 -------WEVRESDDEAFIDGRRAEIVVDGKAVGVFGEVHPEVLEGFELTMPVSAFEIDL 537
Query: 238 EPF 240
F
Sbjct: 538 SAF 540
>sp|C6A237|SYFB_THESM Phenylalanine--tRNA ligase beta subunit OS=Thermococcus sibiricus
(strain MM 739 / DSM 12597) GN=pheT PE=3 SV=1
Length = 560
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSH-HSRISVNTRNIFIECTATDL 315
+ H + K+Y +I+ P YP++ D G VLS+PP+INS H +++ T++IFI+ T +L
Sbjct: 182 EEHEKGKEYGHLIKGRPYYPLLVDSEGNVLSMPPVINSETHGKVTEETKSIFIDITGWNL 241
Query: 316 TKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGI 375
+ L+ +VT + E + + V+ D + P+L ++ V++ + G+
Sbjct: 242 ETIMLALNVIVTALA---ERGGKIRTVRVIYKD-FELKTPDLTPKEFEVDLNYIKRLAGV 297
Query: 376 TQGGQSPDQDVSADKDPLNGLCFSESTDK-VASLLTKMCLQTKILGSGAELSVSIPPTRH 434
E TDK + LL +M + + +L P R+
Sbjct: 298 ------------------------ELTDKDIKDLLERMMYEVDFVDRRVKLRY--PAFRN 331
Query: 435 DIIHTCDIYEDIAIAYGYNNIPKTMPRFA 463
DI+H D+ ED+ IAYGYNNI P A
Sbjct: 332 DIMHPRDVLEDVLIAYGYNNIEPEEPELA 360
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 51/235 (21%)
Query: 6 LSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLV 65
+ +R + G EV+TF L +R+ K+ EDI V I NP + ++ R L+
Sbjct: 371 FENAIRDLMVGFGLQEVMTFNLTNREAQFDKMNIPEEDI--VEIENPISQKWSALRRWLL 428
Query: 66 PGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLL 125
P L++ L+ N P ++FE+ D + E ++ LV + F +L
Sbjct: 429 PSLMEFLSQNTHEEYPQRIFEVGKATLIDESRETKTISESKLVVAIAHPKVTFTEAKEIL 488
Query: 126 DRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGY 185
D V++ L G E Y
Sbjct: 489 DSVLRHL---------------------------GAE----------------------Y 499
Query: 186 CIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIEPF 240
I+ + +F P R +++ G K+G +G +HP+VL + + +P + EI + PF
Sbjct: 500 TIREIEYGSFIPGRAGEIIVEGKKVGIIGEIHPQVLENWGVEMPVAAFEIFLRPF 554
>sp|A9CS50|SYFB_ENTBH Probable phenylalanine--tRNA ligase beta subunit OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_21956 PE=3 SV=1
Length = 566
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 57/244 (23%)
Query: 3 LNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIART 62
LNK SD++R ++A GF E+LT L + K M D V + PK+ E+++ RT
Sbjct: 362 LNKFSDKIREEMAMMGFNEMLTLTLLN------KTENIMHDY-MVEVEYPKSKEYEVVRT 414
Query: 63 TLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIH 122
+L+PGL KTL+ N+ + LP++LFEISD+V D+ YNKS +
Sbjct: 415 SLLPGLFKTLSINQNVKLPIQLFEISDVVLLDS----------------YNKSFNKRFLT 458
Query: 123 GLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGL---LDRVMQLLQIPL 179
G+ CA+ L + E+I L L+ +++ I
Sbjct: 459 GV------------------CAQMNSKLEEI-------LEVIISLFKKLNLIVEFTNIIT 493
Query: 180 DKTEGYCIQAADNATFFPQRCANVMLRG-----SKIGTMGVLHPEVLGKFELTLPCSILE 234
D ++ ++ F + A++ + + IG +GV+HP + +F+++LP S E
Sbjct: 494 D-SDNIFLKEKWEKYFIKNQTASIYVSSYNIPRTLIGCLGVVHPTINMQFKISLPISAFE 552
Query: 235 INIE 238
I++E
Sbjct: 553 IDLE 556
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 98/234 (41%), Gaps = 42/234 (17%)
Query: 244 KMLYSPFN-------SCFSSQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHH 296
K+ + P N + ++ L QY+ ++ S +I + + ++S+PPIINS
Sbjct: 159 KLCFQPLNISTEIKGTELKTKLGCHLHQYIDLL-GSDEEGIIFEYDNHIISMPPIINSEF 217
Query: 297 SRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPE 356
S+I +T NIFIE T TD K VL ++ F+ +E E+ + + P
Sbjct: 218 SKIEPSTTNIFIEVTGTDYNKVDQVLKLMLLNFNTGI-----IEQVEIQKENSIDIT-PV 271
Query: 357 LKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQT 416
V V + + K IG F D + L KM
Sbjct: 272 FNVTPYVFTIDEICKKIG-----------------------FLLQPDTIKLCLEKMQYAV 308
Query: 417 KILGSGAELSVSIPP-TRHDIIHTCDIYEDIAIAYGYNNIPKTMP-RFASIARQ 468
+I ++IP R DII CDI EDI I YG+ NIP P F +I ++
Sbjct: 309 EIKNDQL---IAIPSYNRLDIIDKCDIIEDILIGYGFENIPLDNPIEFYTIGKE 359
>sp|A3CT77|SYFB_METMJ Phenylalanine--tRNA ligase beta subunit OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pheT
PE=3 SV=1
Length = 546
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 259 HSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKA 318
H + + Y ++ + +P+I D VLS PPIIN +R++ T+NI ++CT TD
Sbjct: 176 HPKGRDYAHLVENFDTFPLIVDAENRVLSFPPIINGELTRVTAATKNILLDCTGTD---R 232
Query: 319 KIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQG 378
+ V+ + + + E VE+ V P L + VV+V + ++ +G++
Sbjct: 233 RAVMTAVNIICTALIEAGATVETVTV-----EGEEMPTLAPAERVVSVAECSRLLGLSLT 287
Query: 379 GQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDIIH 438
Q ++A LL +M + G + + + +P R DI+H
Sbjct: 288 PQ-----------------------EMAGLLRRMRFDAEPDGD-SRVRILVPCYRSDILH 323
Query: 439 TCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
DI+ED+AIAYG N +P +++A++
Sbjct: 324 DWDIFEDVAIAYGIENFDAALPATSTVAQE 353
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 186 CIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
+++AD A F R ++++ G +G G +HP VLG F+L P + L +++
Sbjct: 483 VVESADPA-FLDGRRGDIVVDGKIVGVFGEIHPAVLGAFDLEHPVAALALDL 533
>sp|Q8TX56|SYFB_METKA Phenylalanine--tRNA ligase beta subunit OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=pheT PE=3 SV=1
Length = 590
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 49/228 (21%)
Query: 10 LRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLL 69
+R +A+ F EV + L S ++ K+R + D AV + NP E+ I RT ++P L+
Sbjct: 403 VRDTLARMKFVEVNSLTLISPEENYRKMRLE-PDGRAVKLANPIQKEYTIVRTWILPSLM 461
Query: 70 KTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVM 129
+ LA NK P P ++FE+ +++ +D AE GA+++ L GF I +++ ++
Sbjct: 462 RFLADNKHRPYPQRVFELGEVIERDEDAETGAKDRWKLALAIAGPGVGFSEIKSVVEALL 521
Query: 130 QLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQA 189
+ L + G+ I
Sbjct: 522 RELDVT------------------------------------------------GWEITE 533
Query: 190 ADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
+ +F RCA V+ G ++G G +HPEVL +F+L +P E ++
Sbjct: 534 RKHRSFINGRCAAVLADGRELGFFGEIHPEVLTEFDLEVPVVGGEFDV 581
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + +QY ++ D P++ D+ GV+ S PP+INS +R++ +T ++ I+ T TD
Sbjct: 184 RRHEKGRQYAHLVSDGA--PILADEEGVI-SFPPVINSERTRVTQDTTDLLIDVTGTDW- 239
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ VLD L + E + + E+L + + EL V V V +A K +GI
Sbjct: 240 --RSVLDALHVIVCNLAERGAEILTVEILGAYERTTPTMELDVWD--VPVSEARKLLGID 295
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDK---------VASLLTKMCLQTKILGSGAELSV 427
G+ ++ + + +G F ++ V + IL + V
Sbjct: 296 LSGEQLEELLERAR---HGAIFVPEGERELREYPLPDVYHIEADWREIPPILYEEDVVRV 352
Query: 428 SIPPTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
+ P R +I+H D+ ED I Y Y+ T+P F + +R
Sbjct: 353 FVGPRRTNILHEWDLIEDAGIMYNYDRFEPTVPDFYTPSR 392
>sp|B1L7C0|SYFB_KORCO Phenylalanine--tRNA ligase beta subunit OS=Korarchaeum cryptofilum
(strain OPF8) GN=pheT PE=3 SV=1
Length = 556
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 51/236 (21%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P+ K+S ++R + G+ EVL + + SR + + ++ ++ V I NP + + + R
Sbjct: 363 PVEKVSRKVRTVMIGLGYQEVLNYIMTSRASLFHAVGREEREV--VEISNPVSESYSVLR 420
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
L PGLL LA N + P K+FEI D+V D E R++R + A Y + S GFE I
Sbjct: 421 DALFPGLLAFLANNTHVRYPQKVFEIGDVVLIDERLENKTRDERRVAAAYADDSVGFEDI 480
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
+ +L ++ N S E
Sbjct: 481 YS-------------------------HLKVLFENLSYRIE------------------- 496
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
++ F RCA+V+ G ++G +G + PEVL +T+P +I E+ +
Sbjct: 497 -----LEPRKERPFIEGRCASVLREGEEVGVIGEIDPEVLLNLGITVPVAIFEVAL 547
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 30/187 (16%)
Query: 276 PVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCED 335
P+I D VLS+PPIINS +R++ R+IFI+ T TDL K + L + S E
Sbjct: 196 PLIMDSREEVLSMPPIINSELTRLTPGVRDIFIDVTGTDL---KAIWYALEIISSALAER 252
Query: 336 KYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNG 395
+ + ++L DG + P + +++ D D +
Sbjct: 253 GGEISTLDILYPDGRNIETP------------------------RHEPEEMEVDLDFIRS 288
Query: 396 -LCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNN 454
L + S D V L + L + S ++ V IP R D +H D+ E+++I G N
Sbjct: 289 ILGLNLSEDDVVMQLLRARLDAEC--SDGKVRVLIPGYRSDFLHPIDVAEEVSITLGLNK 346
Query: 455 IPKTMPR 461
I +P+
Sbjct: 347 IGYELPK 353
>sp|A0B993|SYFB_METTP Phenylalanine--tRNA ligase beta subunit OS=Methanosaeta thermophila
(strain DSM 6194 / PT) GN=pheT PE=3 SV=1
Length = 539
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + Y I+ +P+I D + VLS PP+IN +R+ +T ++FI+ T TD
Sbjct: 176 ERHPKGVAYRHILDGFERFPLIVDADDNVLSFPPVINGELTRVREDTTDLFIDVTGTD-- 233
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+V L + + E +E ++ D P+L + V +A IG
Sbjct: 234 --PVVYRALNIVVTALAERGGRIEGVRMISPDKEWIS-PDLSPARWTVTTSEANSLIG-- 288
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
F+ S +++A L +M + L + + + V +P R DI
Sbjct: 289 ---------------------FNLSAEELAECLRRMRFGARHLDNDS-VEVLVPAYRADI 326
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
+HT DI ED A +YGY N+ MPR +I R
Sbjct: 327 MHTWDIIEDAAKSYGYENLKAEMPRTLTIGR 357
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 58/236 (24%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P+ +L D++R + G+ EV+ F L + +R+ + + +P + I R
Sbjct: 360 PMEELKDEVRDLMVGLGYLEVMPFTLTNEKVHFEMMRRSAGE--CTRVMHPISELHTIIR 417
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
T ++PGL++ L+ N+ LP +LF + D+V + R + +L AV + GF I
Sbjct: 418 TAVLPGLMEILSLNQHHALPQRLFAVGDVV-------IDGRTKCHLSAVSIHSGAGFAEI 470
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
L+ +M+ L+I +
Sbjct: 471 SSLVSAIMRELRISAE-------------------------------------------- 486
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
++++D A F P R A++ML G++IG G +HPEV+ F L P +E+ +
Sbjct: 487 ----VVESSDGA-FIPGRGADLMLNGARIGCFGEIHPEVISAFGLEHPVVGMELEL 537
>sp|Q58508|SYFB_METJA Phenylalanine--tRNA ligase beta subunit OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pheT PE=3 SV=1
Length = 548
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + +Y +I+D +P+I D G VLS+PPIIN +R++ TRN+ I+ T TD
Sbjct: 179 EKHEKGIKYAHLIKDDK-FPIILDSEGDVLSMPPIINGELTRVTTETRNLLIDVTGTDKY 237
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ L+ +VT ++ K H + EV++ D S YP LK ++V+ + ++YI
Sbjct: 238 AVEKTLNIIVTALAERKYGKIH--AVEVIK-DNQSTIYPNLK--EDVL--ETTSEYINKV 290
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
G + + + L + L + + + ++ V IP R DI
Sbjct: 291 LGANL-------------------TPGTIINYLRRCRLDAQFVDN--KIKVFIPAYRVDI 329
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
DI E++AIAYGYN P +I
Sbjct: 330 FGEIDIAEEVAIAYGYNKFSGEYPIIGTIGE 360
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 51/236 (21%)
Query: 3 LNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIART 62
L K D +R + GF EV+ L S D+V K + ++ED + + P ++E +I R
Sbjct: 364 LEKKCDFIREIMVGFGFYEVINLML-SNDEVLFK-KMRIEDNNYIEVLKPASIEHRIVRK 421
Query: 63 TLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIH 122
+++P L++TL NK LP K+FEI D V D AE +R
Sbjct: 422 SILPLLMETLRINKHKELPQKIFEIGDCVVIDENAETKSR-------------------- 461
Query: 123 GLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKT 182
+ K G N+ N F I ++ +++ L+I
Sbjct: 462 ------------VVKKIAGVIVDNETN-----------FNEIKSYVEGLLRELKIE---- 494
Query: 183 EGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
Y + ++ +F RCA ++ G IG G +HPEV+ FEL P E+ IE
Sbjct: 495 --YELDNFEHPSFIKGRCAKILKDGKIIGYFGEIHPEVITNFELEFPVVGFELEIE 548
>sp|Q0W0X4|SYFB_UNCMA Phenylalanine--tRNA ligase beta subunit OS=Uncultured methanogenic
archaeon RC-I GN=pheT PE=3 SV=1
Length = 553
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 259 HSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKA 318
H + Y ++ + P+ITD G+ S PPIINS + +++NT ++ IE T DL
Sbjct: 180 HPKGIDYRYVLEGKNLMPIITDDEGI-FSFPPIINSKRTEVTLNTHDLLIELTGEDLRTI 238
Query: 319 KIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQG 378
+L+ ++ Y S +V+ D T R P+ VR + V + +G+
Sbjct: 239 DYMLNIVLYSLDLRGASIY---SIDVVYPDETLHR-PDFNVRNIDIEVDYVNRVLGLEL- 293
Query: 379 GQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDIIH 438
+PD + +LL +M + GS L V +PP R DI+H
Sbjct: 294 -TAPD---------------------IKALLERMGFKVAETGSDY-LIVEVPPYRADILH 330
Query: 439 TCDIYEDIAIAYGYNNIPKTMPRFASIARQLFFIFTCLGGVVPASMV 485
D+ +D+ A+GYNNI + P S+ + T LG + +M+
Sbjct: 331 KRDVVDDVGRAFGYNNITPSYPNTPSVGK--LTEATKLGDAIRNTMI 375
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 48/233 (20%)
Query: 5 KLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTL 64
KL D +R + G + F L +D+V K+ +D AV I NP ++ I RT+L
Sbjct: 365 KLGDAIRNTMIGLGCQDTFNFILIGKDEVFGKMNLP-DDGTAVEISNPYAEQYNIVRTSL 423
Query: 65 VPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGL 124
+P L+ L+ N P +FE+ + + D+ G + ++ GF I
Sbjct: 424 IPSLMIVLSNNLHRDYPQNIFEVGTVAHLDSAENTGVKEIDHVACTLCYAKAGFNEIKV- 482
Query: 125 LDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEG 184
K + CA G LD + +
Sbjct: 483 -------------KLQSLCAN-------------------FGKLDELKTV---------- 500
Query: 185 YCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
AA++ +F P RCA V + K+G +G L P VL + + +P + E+ I
Sbjct: 501 ----AAEHPSFIPGRCAEVRIGDKKVGIIGELSPVVLKSWGIEMPVAAFEMEI 549
>sp|A6UWT1|SYFB_META3 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus aeolicus
(strain Nankai-3 / ATCC BAA-1280) GN=pheT PE=3 SV=1
Length = 554
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 52/232 (22%)
Query: 10 LRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLL 69
+R + G EV+ L ++D + K+ + +ED V + P ++E ++ R T++P LL
Sbjct: 372 IRNTMIGYGLFEVMNLTLSNQDVLFNKMNENIEDNEYVEVLKPASIEHRVVRPTILPLLL 431
Query: 70 KTLAANKKMPLPLKLFEISDIVY---KDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLD 126
+TLA NK LP K+FE+ D V KD T +N + AV + + F I GL++
Sbjct: 432 ETLANNKHNELPQKIFEVGDCVVIDEKDETLYTHCKNVPKVSAVITHHNANFNEIKGLVE 491
Query: 127 RVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYC 186
+++ + I Y
Sbjct: 492 GLIREMNIE-------------------------------------------------YS 502
Query: 187 IQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
I + +F RCA +++ +G G LHPEV+ FEL P E+ I+
Sbjct: 503 IDNYKHPSFIEGRCAKIIVDDEIVGYFGELHPEVILNFELGYPVVGFEMEIK 554
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + +Y ++R +P+I D+N V+S+PPIIN + +++ TRN+ +E T TD
Sbjct: 179 EKHEKGVKYAHLLRGDK-FPIIVDKNNAVISMPPIINGNLTKVGTETRNLLVEITGTDKN 237
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ L+ +V C + GT LK+ I
Sbjct: 238 AVENTLNIIV---------------CALADRRGTIFS---LKL---------------IN 264
Query: 377 QGGQSPDQDVSADK-----DPLNG-LCFSESTDKVASLLTKMCLQTKILGSGAELSVSIP 430
G ++ D++ D D +N L + + ++ + L K + + ++IP
Sbjct: 265 NGNETISPDLTPDSAEITIDEINTRLGLNLNAGEIIACLKKARYDAQYSYEDENIKITIP 324
Query: 431 PTRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
R DI++ DI +D+AI YGY N +P A+I +
Sbjct: 325 AYRTDILNNMDIIKDVAINYGYENFNGNLPVVATIGEK 362
>sp|A9AA58|SYFB_METM6 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=pheT PE=3
SV=1
Length = 554
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + +Y +I+D +PVI D NG VLS+PPIIN ++++ ++N+ I+ T T+
Sbjct: 185 EKHEKGIKYAHLIQDDK-FPVIVDLNGEVLSMPPIINGTLTKVTPTSKNLLIDITGTEKE 243
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ L+ +V ++ ++ D +YP+L + +++V+ K +G+
Sbjct: 244 AVEETLNIIVCALAE--------RRGTIVSVDVNGKKYPDLTPKSRMISVESINKKLGLN 295
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
+P + + A K +G+ L L V IP R+DI
Sbjct: 296 ---LNPGEIIQAVKK--SGM--------------------DALYEDGNLIVKIPAYRNDI 330
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
+H D+ E+IAI YGY +P A+ +
Sbjct: 331 LHNVDLKEEIAINYGYEKFEGKLPSVATTGSK 362
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 86/224 (38%), Gaps = 52/224 (23%)
Query: 18 GFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANKK 77
GF EV+ L ++D + K+ ++E+ + + P ++E ++ RT+++P LL+TL NK
Sbjct: 380 GFYEVMNLTLSNQDTLFEKMNLEVEEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKH 439
Query: 78 MPLPLKLFEISDIVY---KDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQI 134
LP K+FEI D V D + +N + + + F I
Sbjct: 440 HSLPQKIFEIGDCVIIDENDTETDTKCKNIKKIAGAITHPLTNFNEIKS----------- 488
Query: 135 PLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNAT 194
+ G R + P F IP G C
Sbjct: 489 ----STGALLREFFEDFEFENYEHPAF---------------IP-----GRC-------- 516
Query: 195 FFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
A ++ ++G G +HPEV+ FEL P EI IE
Sbjct: 517 ------AKIIKDRKEVGFFGEIHPEVILNFELEHPIVGFEITIE 554
>sp|A6VGJ4|SYFB_METM7 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pheT PE=3
SV=1
Length = 554
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 34/212 (16%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + +Y +I+D +P+I D NG VLSLPPIIN ++++ ++N+ I+ T T+
Sbjct: 185 EKHEKGIKYAHLIQDDR-FPIIVDVNGEVLSLPPIINGTLTKVTPTSKNLLIDITGTE-- 241
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ V +TL + E + + S V +YP+L ++ +++++ K +G+
Sbjct: 242 -KEAVEETLNIIVCALAERRGTIVSVNV-----NGKKYPDLTLKSRIISIESINKKLGLE 295
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
+P + + A K +G+ L L V IP R+DI
Sbjct: 296 ---LNPGEIIQAVKK--SGM--------------------DALYEDGNLIVKIPAYRNDI 330
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
+H D+ E+IAI YGY +P A+ +
Sbjct: 331 LHNVDLKEEIAINYGYEKFEGKLPSVATTGSK 362
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 4 NKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTT 63
N +SD + G GF EV+ L ++D + K+ K+E+ + + P ++E ++ RT+
Sbjct: 370 NAMSDLMIG----LGFYEVMNLTLSNQDTLFEKMNLKVEEKDYIEVLKPASIEHRVLRTS 425
Query: 64 LVPGLLKTLAANKKMPLPLKLFEISDIVYKD 94
++P LL+TL NK LP K+FEI D V D
Sbjct: 426 ILPLLLETLYINKHHSLPQKIFEIGDCVIID 456
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 191 DNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
++ F P RCA ++ G ++G G +HPEV+ FEL P EI IE
Sbjct: 507 EHPAFIPGRCAKIIKDGKEVGFFGEIHPEVILNFELEHPIVGFEITIE 554
>sp|A4FWS3|SYFB_METM5 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pheT PE=3
SV=1
Length = 554
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 34/212 (16%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + +Y +I++ +P+I D NG VLS+PPIIN ++++ ++N+ I+ T T+
Sbjct: 185 EKHEKGIKYAHLIQNDK-FPIIVDANGEVLSMPPIINGTLTKVTPTSKNLLIDITGTEKE 243
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ L+ +V ++ ++ D +YP+L ++ +++V+ K +G+
Sbjct: 244 AVEETLNIIVCALAE--------RRGTIVSVDVNGKKYPDLSLKSRMISVESINKKLGLE 295
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
+P + + A K +G+ L L V IP R+DI
Sbjct: 296 ---LNPGEMIQAVKK--SGM--------------------DALYEDGNLIVKIPAYRNDI 330
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
+H D+ E+IAI YGY +P A+ +
Sbjct: 331 LHNVDLKEEIAINYGYEKFEGKLPSVATTGSK 362
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 4 NKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTT 63
N +SD + G GF EV+ L ++D + K+ K+E+ + + P ++E ++ RT+
Sbjct: 370 NAMSDLMIG----LGFYEVMNLTLSNQDTLFEKMNLKVEEKDYIEVLKPASIEHRVLRTS 425
Query: 64 LVPGLLKTLAANKKMPLPLKLFEISDIVYKD 94
++P LL+TL NK LP K+FEI D V D
Sbjct: 426 ILPLLLETLYINKHHSLPQKIFEIGDCVVID 456
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 191 DNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
++ F P RCA ++ G ++G G +HPEV+ FEL P EI IE
Sbjct: 507 EHPAFIPGRCAKIIKDGKEVGFFGEIHPEVILNFELEHPIVGFEITIE 554
>sp|A6UPQ4|SYFB_METVS Phenylalanine--tRNA ligase beta subunit OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pheT PE=3 SV=1
Length = 554
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + ++Y +I+D +P+I D VLS+PPIIN ++++ N++N+ I+ T T+
Sbjct: 185 EKHEKGQKYGKLIKDGK-FPIIVDSKNNVLSMPPIINGTLTKVTKNSKNLLIDITGTEKE 243
Query: 317 KAKIVLDTLV-TMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGI 375
+ L+ V ++F + S + + RYP+L R +++ K +G+
Sbjct: 244 AVEEALNIFVCSLFER---------SGTIYSVNVNGKRYPDLTPRYREISIDLINKKLGL 294
Query: 376 TQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHD 435
LN ++ S L K + K +L V IP R+D
Sbjct: 295 E----------------LNA-------GEIISALKKARMDVKF--ENEKLMVKIPAYRND 329
Query: 436 IIHTCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
I+H D+ E++A +GY +P A+ +
Sbjct: 330 ILHNVDLKEEVAKNHGYEKFEGKLPSIATTGSR 362
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 52/240 (21%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P+ K + + GF EV+ L +++ + K+ K + V + P ++E ++ R
Sbjct: 364 PIEKKCKHYQNTMLGFGFFEVMNLTLSNQETLFEKMNLKYSEKDYVEVLKPASIEHRVLR 423
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
T+++P LL+TL NK LP K+FEI D V D
Sbjct: 424 TSILPMLLETLFINKHNVLPQKIFEIGDCVLIDEND------------------------ 459
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGL--LDRVMQLLQIPL 179
KT+ C ++ AV +H L + + + + L
Sbjct: 460 ---------------TKTDTKCKNIKKISCAV----------VHPLTNFNEIKTVTEGLL 494
Query: 180 DKTEG-YCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
+T G + I+ ++ +F RCA ++ G +IG G +HPEV+ FEL P EI IE
Sbjct: 495 RETFGEFEIENYEHPSFISGRCAKILNNGKEIGFFGEIHPEVILNFELEHPIVAFEILIE 554
>sp|Q971D8|SYFB_SULTO Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=pheT
PE=3 SV=1
Length = 540
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 276 PVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCED 335
P I +G +LSLPP+INS +RI+ T+++FI+ T T L LD +VT ++
Sbjct: 192 PAIMQDDGQILSLPPVINSEKTRINSKTQSLFIDVTGTSLDTVIFTLDVIVTNLAEMGGK 251
Query: 336 KYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNG 395
++ + ++ +K+ E +N K +G + + + +N
Sbjct: 252 IGRIKVISPYVDNSPLLQHKSIKITAEYIN-----KILGTNLNKNEIIEYLKMARFDVND 306
Query: 396 LCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNI 455
L G E+ V IPP R+DI+ DI E++AI YGYNN+
Sbjct: 307 L-------------------------GKEIEVIIPPYRNDILSQIDITEEVAITYGYNNL 341
Query: 456 PKTMPRFASIA 466
T + I
Sbjct: 342 SPTPYKIEKIG 352
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 60/232 (25%)
Query: 5 KLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTL 64
KL LR GFTE+ TF L S S+ L V I NP T+++ R +L
Sbjct: 359 KLIRVLRDLSVGGGFTEIFTFTLISE---SLLLGD------FVKILNPITVDYNSVRNSL 409
Query: 65 VPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGL 124
+P +L L+ N+ +P+++FEI D+V ++ E G N+ N N FE +
Sbjct: 410 LPSILIFLSKNQHARMPIRVFEIGDVVIRNENTETGYSNKLNAAYAIMNSRVSFEELQAP 469
Query: 125 LDRVMQLLQI-PLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTE 183
L ++ L I P+ K +
Sbjct: 470 LHEILNSLGINPIYKRDT------------------------------------------ 487
Query: 184 GYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEI 235
N F R A++ KIG +G ++P +L K ++ P + EI
Sbjct: 488 --------NPLFIEGRTASIYANNKKIGIIGEINPNILEKIDIEYPIVMSEI 531
>sp|Q6LXU2|SYFB_METMP Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain S2 / LL) GN=pheT PE=3 SV=1
Length = 554
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + +Y +I++ +P+I D NG VLSLPPIIN ++++ ++N+ I+ T T+
Sbjct: 185 EKHEKGIKYAHLIQNDK-FPIILDANGEVLSLPPIINGTLTKVTPTSKNLLIDITGTE-- 241
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ V +TL + E + + S V +YP+L + +++V+ K +G+
Sbjct: 242 -KEAVEETLNIIVCALVERRGTIVSVNV-----NGKKYPDLTPKSRIISVESINKKLGLN 295
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
+P + + A L K + L L V IP R+DI
Sbjct: 296 ---LNPGEIIQA--------------------LKKSGMDA--LYEDGNLIVKIPAYRNDI 330
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPRFASIARQ 468
+ D+ E+IAI YGY +P A+ +
Sbjct: 331 LQNVDLKEEIAINYGYEKFDGKLPSVATTGSK 362
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 52/224 (23%)
Query: 18 GFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANKK 77
GF EV+ L ++D + K+ K+++ + + P ++E ++ RT+++P LL+TL NK
Sbjct: 380 GFYEVMNLTLSNQDTLFEKMNLKVDEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKH 439
Query: 78 MPLPLKLFEISDIVY---KDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQI 134
LP K+FE+ D V +D + +N + + + F I
Sbjct: 440 NALPQKIFEVGDCVVIDEEDTETDTKCKNIKKIAGAITHPLTNFNEIKS----------- 488
Query: 135 PLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNAT 194
TE Y + P F IP G C
Sbjct: 489 ---STEALLREFFEGFEFENY-EHPAF---------------IP-----GRC-------- 516
Query: 195 FFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
A ++ G ++G G +HPEV+ FEL P EI IE
Sbjct: 517 ------AKILKSGKEVGFFGEIHPEVILNFELEHPVVGFEITIE 554
>sp|A1RYS1|SYFB_THEPD Phenylalanine--tRNA ligase beta subunit OS=Thermofilum pendens
(strain Hrk 5) GN=pheT PE=3 SV=1
Length = 556
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 34/207 (16%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + +Y +++ YP+I D G V+S PPI NS R++ +TR++ I+ T+TD
Sbjct: 174 EKHPKGVEYGHLVKGHGEYPLIVDAEGKVVSFPPITNSEDFRVTESTRDVLIDVTSTDPE 233
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEV--LRSDGTSARYPELKVRKEVVNVKKATKYIG 374
+ ++++F+ V EV LR G +EVV
Sbjct: 234 AGR----RIISLFAHAVA----VRGGEVRPLRLKGALDEESPRMEPEEVV---------- 275
Query: 375 ITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRH 434
DVS ++D L GL ++ LL M + + G+G +++V P R
Sbjct: 276 ---------YDVSMNRD-LLGLDL--GVEETVRLLRAMRMDAEPAGNG-KVAVRYPYFRV 322
Query: 435 DIIHTCDIYEDIAIAYGYNNI-PKTMP 460
DI+H DI E++A+ YGY I P +P
Sbjct: 323 DILHPVDIAEEVAMGYGYERIEPAVIP 349
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 92/240 (38%), Gaps = 57/240 (23%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRD---DVSVKLRQKMEDIPAVHIGNPKTLEFQ 58
P+ + LR + GF EV + + S D + RQ P V + NP+ +
Sbjct: 358 PIEVFTRALREGMVGLGFVEVNNYMMTSASLMFDAMLLPRQ-----PIVEVENPRHEAYH 412
Query: 59 IARTTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGF 118
RT +VP LL+ ++++K P ++FE D+ D + + R +R L K
Sbjct: 413 ALRTWIVPQLLRLMSSSKHAGYPQRVFEAGDVAIPDESRDNRVREERRLAFAVAGKG--- 469
Query: 119 EIIHGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIP 178
+ T+G A + GL ++
Sbjct: 470 -----------------VTLTDGLAA-------------------LKGLFRQL------- 486
Query: 179 LDKTEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
+ ++ A++ +F R A V+ G +G +HP+VL F L +P E+N+E
Sbjct: 487 ---GVSFKLEKAEHPSFIAGRVARVVTEAGDAGIVGEVHPQVLVNFGLEVPVVAGELNVE 543
>sp|Q468N7|SYFB_METBF Phenylalanine--tRNA ligase beta subunit OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=pheT PE=3 SV=1
Length = 544
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 28/205 (13%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + ++ ++R YP+I D + VLS PPIIN + ++ +T ++FI+ T
Sbjct: 174 EKHPKGTRFAHLVRGFKKYPIILDSDDNVLSFPPIINGTLTSVTESTTDLFIDVTGL--- 230
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
+ V L + + E +E +V+R D P+L+ + + + +G+
Sbjct: 231 -GEAVYTALNIVVTALAERGGQIEFVKVVRPDSGELILPDLEPKTRFLTKTEVRDLLGME 289
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
S +++ L +M K L + V +P R DI
Sbjct: 290 L-----------------------SIEEIVKQLERMRFGAKALDEET-IEVKVPAYRADI 325
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPR 461
+H D+ EDIA YGY NI +P
Sbjct: 326 LHNYDLVEDIAKGYGYENIKVKIPE 350
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 59/221 (26%)
Query: 18 GFTEVLTFALCSRD-DVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANK 76
G+ EV+ F L S + RQK +D+ ++ +P + + + RTTL+P LL+ LA N+
Sbjct: 375 GYYEVMPFTLTSEKINFENMRRQKTDDV--TYVLHPISEDQTMIRTTLLPNLLEILALNQ 432
Query: 77 KMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPL 136
LP K+FE ++V + T + ++ AV + F I+ ++D +M+ + +P
Sbjct: 433 HRELPQKIFEFGEVVNNEITGQ-------HVAAVSIHPQANFTEIYEVVDALMREMMLP- 484
Query: 137 DKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNATFF 196
Y ++ +++ F
Sbjct: 485 ------------------------------------------------YEVKESEDPAFL 496
Query: 197 PQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
R A+V + G K+G G HPEV+ F L E+++
Sbjct: 497 EGRRADVYVNGKKLGVFGEFHPEVINNFALGYAVVGFELDL 537
>sp|Q8TPF7|SYFB_METAC Phenylalanine--tRNA ligase beta subunit OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pheT PE=3 SV=1
Length = 545
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 257 QTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLT 316
+ H + ++ +++D YP+I D N VLS PPIIN + ++ T ++FI+ T
Sbjct: 174 EKHPKGTRFAHLVKDFEKYPIILDANDNVLSFPPIINGTLTTVTEQTTDLFIDVTGLG-E 232
Query: 317 KAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGIT 376
I L+ +VT + E +E V+R G P+L+ ++ ++ + +G+
Sbjct: 233 AVYIALNIVVTALA---ERGGQIEFVRVIRPGGEELVLPDLEPKERLLTTGEVKALMGMD 289
Query: 377 QGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDI 436
+ +++ L +M L A + V +P R DI
Sbjct: 290 L-----------------------TVEEIVKQLERMRFGAAALDKEA-VEVKVPAYRADI 325
Query: 437 IHTCDIYEDIAIAYGYNNIPKTMPR 461
+H D+ EDIA YGY NI +P
Sbjct: 326 LHNYDLVEDIAKGYGYENIKVKVPE 350
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 59/221 (26%)
Query: 18 GFTEVLTFALCSRD-DVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANK 76
G+ EV+ F L S + R K +D+ ++ +P + + + RTT++P LL+ L+ N+
Sbjct: 375 GYYEVMPFTLTSEKINFENMCRPKTDDV--TYVLHPISEDQTMIRTTVLPNLLEILSLNQ 432
Query: 77 KMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPL 136
LP K+FE ++V + T + ++ AV + F ++ ++D +M+ + +P
Sbjct: 433 HRELPQKIFEFGEVVSNETTGQ-------HVAAVSIHPQANFTEVYEVVDALMREMMLP- 484
Query: 137 DKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNATFF 196
Y ++ +++ F
Sbjct: 485 ------------------------------------------------YEVKESEDPAFL 496
Query: 197 PQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
R A+V + G K+G G HPEV+ F L E+++
Sbjct: 497 EGRRADVYVNGKKLGVFGEFHPEVISNFALGYAVVGFELDL 537
>sp|Q661A7|SYFB_BORGA Phenylalanine--tRNA ligase beta subunit OS=Borrelia garinii (strain
PBi) GN=pheT PE=3 SV=1
Length = 566
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 53/236 (22%)
Query: 3 LNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIART 62
L + S +R + GF E++ + SR D R + D + + NP T ++ R
Sbjct: 376 LEEFSRNVRNLMMGMGFQEMIYNYMGSRKDFID--RMNINDQNFLKVSNPMTENYEYIRA 433
Query: 63 TLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIH 122
+++P LLK+ + + P P K+FE+ + K+ A G NL + K F I+
Sbjct: 434 SIIPNLLKSESVSSNFPYPHKIFEVGKVALKNLDAAEGTSTFTNLAFLMSGKEISFNEIN 493
Query: 123 GLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKT 182
++ + L I +
Sbjct: 494 SIVATLFYYLNIEI---------------------------------------------- 507
Query: 183 EGYCIQAADNATFFPQ-RCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
I ATF+ R A++++ G +G+ G + P VL F + +PCS+ E+NI
Sbjct: 508 ----ILRESKATFYINGRGADILIEGFNVGSFGEISPYVLNNFGIFIPCSVFEVNI 559
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 44/223 (19%)
Query: 256 SQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHH-SRISVNTRNIFIECTATD 314
++ H + +Y I+++ YP++ D N V+S PPIINS++ + V +F+E T D
Sbjct: 183 NEKHPKGLEYSYIVKNFDKYPLLLDNNNNVVSYPPIINSNNIGSLKVGDTELFVEVTGID 242
Query: 315 LTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPEL----KVRKEV-VNVKKA 369
+ L + + + + + + + D + EL ++EV +VK
Sbjct: 243 FEATLLALSIVAC---DFYDMGFEILPVKTVFKDPFGLDFEELVCPYYFQEEVEFDVKNV 299
Query: 370 TKYIGITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILG----SGAEL 425
+ +G N L L ++CL K +G S
Sbjct: 300 NRLLG-------------------NNLT-----------LERICLNLKKMGVSSYSRDFK 329
Query: 426 SVSIPP-TRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
+ +PP R+D +H D+ ED+ I G + +P+ +I R
Sbjct: 330 NYIVPPFYRNDFLHEVDVIEDVMIGEGLASFYPELPKAFTIGR 372
>sp|B7J278|SYFB_BORBZ Phenylalanine--tRNA ligase beta subunit OS=Borrelia burgdorferi
(strain ZS7) GN=pheT PE=3 SV=1
Length = 566
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 53/237 (22%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
PL + S +R + GF E++ + S+ D R + D + + NP T ++ R
Sbjct: 375 PLEEFSRNVRNLMVGMGFQEMIYNYMGSKKDFID--RMNINDQNFLKVSNPMTENYEYIR 432
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
+++P LLK+ + + P P K+FEI +V RN
Sbjct: 433 ASIIPNLLKSESVSSNFPYPHKIFEI---------GKVALRN------------------ 465
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
LD TEG NL + K F I+ ++ + L I ++
Sbjct: 466 --------------LDTTEG--TSTFTNLAFLMSGKEISFNEINSIVATLFYYLNIEINL 509
Query: 182 TEGYCIQAADNATFFPQ-RCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
E TF+ R A++++ G IG G + P VL F + +PCS+ E+NI
Sbjct: 510 IES-------KTTFYINGRGADIVIEGFNIGGFGEISPYVLNNFGIFIPCSVFEVNI 559
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 256 SQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHH-SRISVNTRNIFIECTATD 314
++ H + +Y II++ +P++ D N V+S PPIINS++ + V ++F+E T D
Sbjct: 183 NEKHPKGLEYSHIIKNFDKFPLLLDDNNNVVSYPPIINSNNIGSLKVGDTDLFVEVTGID 242
Query: 315 LTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIG 374
TL+ + C+ ++ E+L T R P KE+V Y
Sbjct: 243 FEA------TLLALSIAACD--FYDMGFEILPVK-TVFREPFNLDFKELV----CPYYF- 288
Query: 375 ITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILG----SGAELSVSIP 430
++V + + +N L S T L ++CL K +G S + +P
Sbjct: 289 --------QEEVEFNVENINRLLGSNLT------LERICLSLKKMGVNSYSKDFKNYIVP 334
Query: 431 P-TRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
P R+D +H D+ ED+ I G ++ +P+ ++ R
Sbjct: 335 PFYRNDFLHEVDVIEDVMIGEGLSSFNPELPKAFAVGR 372
>sp|B5RPL7|SYFB_BORRA Phenylalanine--tRNA ligase beta subunit OS=Borrelia recurrentis
(strain A1) GN=pheT PE=3 SV=1
Length = 564
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 51/236 (21%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
P+ + S +R + GF E++ L S+ D K+ K ++ +V NP T ++ R
Sbjct: 375 PIEEFSRSVRNLMIGMGFQEMIYNYLGSKVDFIEKMNIKGSELLSV--SNPMTESYEYIR 432
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
+++P LLK+ + + P P K+FEI + KD ++ G NL + +K F I
Sbjct: 433 GSIIPDLLKSESISSNFPYPHKIFEIGKVALKDLVSDEGTVTYDNLAFLMADKEFSFNEI 492
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
+ L+ + L I
Sbjct: 493 NSLVSSLFYYLNI----------------------------------------------- 505
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
G+ ++ + + R A++++ +G G + P +L F + +PC +LEINI
Sbjct: 506 --GFKVKESSKNLYIDGRGADILVNDIVLGCFGEVSPYILNNFGIMVPCCVLEINI 559
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 256 SQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHH-SRISVNTRNIFIECTATD 314
++ H + +Y I + Y ++ D VLS PPIINS + V N+FIE T TD
Sbjct: 183 NERHPKGIEYSSIFENVDQYSLLLDYKNNVLSYPPIINSRDIGTLKVGDTNLFIEVTGTD 242
Query: 315 LTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIG 374
L TL+++ C D Y + ++L R E KE++ Y
Sbjct: 243 LEA------TLLSLSIVAC-DLYDM-GFKILPVKTVFPR--ETLFGKEII----CPYYF- 287
Query: 375 ITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVS-----I 429
+ + D +N L S T MCL K LG A S +
Sbjct: 288 --------QNSLKINVDSVNKLLGSNFT------ANDMCLDLKKLGISAYFEESDTFYIM 333
Query: 430 PPT-RHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
PP R+D +H D+ E++ I G +N +P+ +I +
Sbjct: 334 PPVYRNDFLHEVDVIEEVMIGKGLDNFKSELPKDFTIGK 372
>sp|P94283|SYFB_BORBU Phenylalanine--tRNA ligase beta subunit OS=Borrelia burgdorferi
(strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
GN=pheT PE=3 SV=1
Length = 566
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 51/236 (21%)
Query: 2 PLNKLSDQLRGDIAQAGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIAR 61
PL + S +R + GF E++ + S+ D R + D + + NP T ++ R
Sbjct: 375 PLEEFSRNVRNLMVGMGFQEMIYNYMGSKKDFID--RMNINDQNFLKVSNPMTENYEYIR 432
Query: 62 TTLVPGLLKTLAANKKMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEII 121
+++P LLK+ + + P P K+FEI + K+ G NL + K F I
Sbjct: 433 ASIIPNLLKSESVSSNFPYPHKIFEIGKVALKNLDTTEGTSTFTNLAFLMSGKEISFNEI 492
Query: 122 HGLLDRVMQLLQIPLDKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDK 181
+ ++ + L I ++ E K
Sbjct: 493 NSIVATLFYYLNIEINLIES---------------------------------------K 513
Query: 182 TEGYCIQAADNATFFPQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
T Y R A++++ G IG G + P VL F + +PCS+ E+NI
Sbjct: 514 TTFYI----------NGRGADIVIEGFNIGGFGEISPYVLNNFGIFIPCSVFEVNI 559
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 256 SQTHSQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHH-SRISVNTRNIFIECTATD 314
++ H + +Y II++ +P++ D N V+S PPIINS++ + V ++F+E T D
Sbjct: 183 NEKHPKGLEYSHIIKNFDKFPLLLDDNNNVVSYPPIINSNNIGSLKVGDTDLFVEVTGID 242
Query: 315 LTKAKIVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIG 374
TL+ + C+ ++ E+L T R P KE+V Y
Sbjct: 243 FEA------TLLALSIAACD--FYDMGFEILPVK-TVFREPFNLDFKELV----CPYYF- 288
Query: 375 ITQGGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILG----SGAELSVSIP 430
++V + + +N L S T L ++CL K +G S + +P
Sbjct: 289 --------QEEVEFNVENINRLLGSNLT------LERICLSLKKMGVNSYSKDFKNYIVP 334
Query: 431 P-TRHDIIHTCDIYEDIAIAYGYNNIPKTMPRFASIAR 467
P R+D +H D+ ED+ I G ++ +P+ ++ R
Sbjct: 335 PFYRNDFLHEVDVIEDVMIGEGLSSFNPELPKAFAVGR 372
>sp|P95960|SYFB_SULSO Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pheT
PE=3 SV=1
Length = 544
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 31/198 (15%)
Query: 260 SQLKQYLPIIRDSPVYPVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKAK 319
Q K Y I + V P I ++G VLS+PPIINS +++ +T+++FI+ T T
Sbjct: 173 EQGKLYGNISISNGVSPAIVQEDGEVLSIPPIINSDKTKLDESTKDLFIDVTGTSFEAVA 232
Query: 320 IVLDTLVTMFSQYCEDKYHVESCEVLRSDGTSARYPELKVRKEVVNVKK--ATKYIGITQ 377
LD +V S E + +V+++D + + L + K + NV++ A K +GI
Sbjct: 233 QTLDIIV---SNLAEAGGTIGRVKVIKTDNSFQQSSPLLIHK-IQNVREEYANKILGIKI 288
Query: 378 GGQSPDQDVSADKDPLNGLCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDII 437
S +++ +T+M + + + V++P R DII
Sbjct: 289 -----------------------SEEEICKHITRMRMNCNV--ENGIIRVTVPQYRVDII 323
Query: 438 HTCDIYEDIAIAYGYNNI 455
+ DI EDIA++ GYNN+
Sbjct: 324 NEIDIVEDIAMSIGYNNL 341
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 57/221 (25%)
Query: 17 AGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANK 76
AGF EV F L +K+ D V I NP + E+ R +L+P LL L+ N+
Sbjct: 371 AGFVEVFNFVLIKN--------EKILDSKYVKILNPISEEYNAVRNSLIPILLDFLSKNQ 422
Query: 77 KMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPL 136
P+++FE D+V D++ + G RN
Sbjct: 423 HAKFPIRIFETGDVVIYDSSTDTGFRN--------------------------------- 449
Query: 137 DKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNATFF 196
DK Y A+ NK +E + + +++ L I ++ E +N F
Sbjct: 450 DKRAAY---------AIMDNKV-SYEDVQAPIHYILKTLGIEVNYKE------ENNDIFI 493
Query: 197 PQRCANVMLRGSKIGTMGVLHPEVLGKFELTLPCSILEINI 237
R A+++ KIG +G ++P+VL +F + P I E+ I
Sbjct: 494 EGRSASIVYENEKIGVIGEINPDVLIRFGIEYPTVIAELYI 534
>sp|Q4J8Q0|SYFB_SULAC Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=pheT PE=3 SV=1
Length = 542
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 276 PVITDQNGVVLSLPPIINSHHSRISVNTRNIFIECTATDLTKAKIVLDTLVTMFSQYCED 335
P I ++NG VLS+PPIINS +RI TRNIFI+ T T LD LVT ++
Sbjct: 192 PAIVEENGDVLSIPPIINSDKTRIDEKTRNIFIDVTGTSFEAVSSTLDILVTDLAEMG-- 249
Query: 336 KYHVESCEVLRSDGTSARYPELKVRKEVVNVKKATKYIGITQGGQSPDQDVSADKDPLNG 395
E+L S +R+ V+V + YI
Sbjct: 250 ----GKIELLNFISPSKFEFSPLLRRYTVSV--SANYIS-------------------KN 284
Query: 396 LCFSESTDKVASLLTKMCLQTKILGSGAELSVSIPPTRHDIIHTCDIYEDIAIAYGYNNI 455
L + S +++ L TK+L E V++PP R DI+ D+ E+IA+ GY+ +
Sbjct: 285 LGINLSLNEIEKYLRMARFDTKVLNDVVE--VTVPPYRVDILSQIDLVEEIAMTIGYDKL 342
Query: 456 -PK 457
PK
Sbjct: 343 SPK 345
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 60/224 (26%)
Query: 17 AGFTEVLTFALCSRDDVSVKLRQKMEDIPAVHIGNPKTLEFQIARTTLVPGLLKTLAANK 76
AGF+E+ TF L + +LR + V I NP T+E+ R +L+P LL L N+
Sbjct: 372 AGFSEIFTFILSNDK----RLRNEY-----VSIVNPVTVEYNAVRNSLIPTLLNFLKYNQ 422
Query: 77 KMPLPLKLFEISDIVYKDATAEVGARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPL 136
+P+ +FEI D+V KD + G +N +L AVY G++
Sbjct: 423 HAIMPVYVFEIGDVVIKDKRTDTGYKN--SLRAVY-----------GIM----------- 458
Query: 137 DKTEGYCARNQRNLVAVYYNKSPGFEIIHGLLDRVMQLLQIPLDKTEGYCIQAADNATFF 196
N +E L RV Q+L + LD Y D F
Sbjct: 459 -------------------NSKVNYE---DLQSRVHQIL-MSLDIEPTYKTYLDD--MFI 493
Query: 197 PQRCANVM--LRGSKIGTMGVLHPEVLGKFELTLPCSILEINIE 238
P R A ++ + +IG +G ++P +L + E+ P I EI ++
Sbjct: 494 PGRGAKIIDTSKSVEIGVIGEINPVLLEELEIEFPVVISEIYLD 537
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,946,279
Number of Sequences: 539616
Number of extensions: 7016855
Number of successful extensions: 15965
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 15230
Number of HSP's gapped (non-prelim): 704
length of query: 485
length of database: 191,569,459
effective HSP length: 121
effective length of query: 364
effective length of database: 126,275,923
effective search space: 45964435972
effective search space used: 45964435972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)