Query psy15934
Match_columns 70
No_of_seqs 88 out of 90
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 16:50:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15934.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15934hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 98.4 1.7E-07 5.8E-12 60.8 4.1 37 32-69 6-42 (169)
2 4g8k_A 2-5A-dependent ribonucl 98.4 1.5E-07 5.2E-12 64.2 3.0 37 34-70 29-65 (337)
3 1d9s_A Cyclin-dependent kinase 97.9 1.3E-05 4.4E-10 48.4 4.8 36 34-70 16-51 (136)
4 1n0q_A 3ANK, 3 ankyrin repeats 97.9 9.3E-06 3.2E-10 46.3 3.6 35 34-69 39-73 (93)
5 3aaa_C Myotrophin, protein V-1 97.9 1.1E-05 3.9E-10 47.8 3.8 36 33-69 10-45 (123)
6 1bi7_B P16INK4A, MTS1, multipl 97.9 1.9E-05 6.4E-10 48.7 4.5 39 31-70 13-51 (156)
7 4gpm_A Engineered protein OR26 97.8 1E-05 3.6E-10 52.3 3.2 35 34-69 74-108 (169)
8 2jab_A H10-2-G3; HER2, darpin, 97.8 1.8E-05 6E-10 47.8 3.6 38 31-69 15-52 (136)
9 1n0q_A 3ANK, 3 ankyrin repeats 97.8 1.7E-05 5.7E-10 45.2 3.2 35 34-69 6-40 (93)
10 2zgd_A 3 repeat synthetic anky 97.8 1.7E-05 5.9E-10 46.8 3.0 35 34-69 28-62 (110)
11 3aaa_C Myotrophin, protein V-1 97.7 2.2E-05 7.4E-10 46.5 3.1 35 34-69 44-78 (123)
12 2y1l_E Darpin-8.4; hydrolase-i 97.7 3.5E-05 1.2E-09 47.9 4.0 42 27-69 11-52 (169)
13 4b93_B Ankyrin repeat domain-c 97.7 3.8E-05 1.3E-09 52.4 4.5 36 34-70 189-224 (269)
14 2l6b_A NR1C; ankyrin, consensu 97.7 4E-05 1.4E-09 44.7 3.8 35 34-69 13-47 (115)
15 1ihb_A P18-INK4C(INK6), cyclin 97.7 3.3E-05 1.1E-09 46.9 3.3 37 32-69 7-43 (162)
16 1s70_B 130 kDa myosin-binding 97.6 3E-05 1E-09 51.2 2.7 35 34-69 44-78 (299)
17 3c5r_A BARD-1, BRCA1-associate 97.6 6E-05 2.1E-09 45.2 3.6 34 35-69 15-48 (137)
18 1bd8_A P19INK4D CDK4/6 inhibit 97.6 6.6E-05 2.3E-09 45.5 3.8 35 34-69 72-106 (156)
19 3c5r_A BARD-1, BRCA1-associate 97.6 9.9E-05 3.4E-09 44.2 4.4 35 34-69 80-114 (137)
20 1ycs_B 53BP2, P53BP2; ankyrin 97.6 3.4E-05 1.1E-09 50.9 2.5 38 31-69 38-75 (239)
21 2vge_A RELA-associated inhibit 97.6 3.8E-05 1.3E-09 51.1 2.7 35 34-69 25-59 (229)
22 3twr_A Tankyrase-2; ankyrin re 97.5 0.00011 3.8E-09 45.0 4.5 35 34-69 112-146 (165)
23 2rfa_A Transient receptor pote 97.5 5.2E-05 1.8E-09 48.5 3.0 35 34-69 7-42 (232)
24 1n0r_A 4ANK, 4 ankyrin repeats 97.5 7.6E-05 2.6E-09 43.0 3.3 35 34-69 39-73 (126)
25 3eu9_A Huntingtin-interacting 97.5 8.8E-05 3E-09 46.8 3.8 35 34-69 13-47 (240)
26 3utm_A Tankyrase-1; tankyrase, 97.5 0.00013 4.4E-09 48.5 4.7 51 18-69 12-63 (351)
27 2rfa_A Transient receptor pote 97.5 6.2E-05 2.1E-09 48.2 3.0 35 34-69 125-159 (232)
28 1wdy_A 2-5A-dependent ribonucl 97.5 9.8E-05 3.4E-09 47.5 3.9 36 34-69 9-44 (285)
29 1sw6_A Regulatory protein SWI6 97.5 0.00012 4E-09 50.7 4.3 36 34-70 287-322 (327)
30 1d9s_A Cyclin-dependent kinase 97.5 7.8E-05 2.7E-09 44.9 3.0 35 34-69 82-116 (136)
31 1k1a_A B-cell lymphoma 3-encod 97.5 0.00017 5.7E-09 45.9 4.6 35 34-69 187-221 (241)
32 1ihb_A P18-INK4C(INK6), cyclin 97.5 0.00011 3.9E-09 44.5 3.6 35 34-69 74-108 (162)
33 2jab_A H10-2-G3; HER2, darpin, 97.4 0.00011 3.9E-09 44.2 3.6 35 34-69 51-85 (136)
34 2zgd_A 3 repeat synthetic anky 97.4 9.9E-05 3.4E-09 43.5 3.2 35 34-69 61-95 (110)
35 3deo_A Signal recognition part 97.4 8.6E-05 2.9E-09 46.9 3.1 34 34-69 48-81 (183)
36 4hbd_A KN motif and ankyrin re 97.4 8.4E-05 2.9E-09 50.3 3.2 35 34-69 187-221 (276)
37 3ehr_A Osteoclast-stimulating 97.4 8.3E-05 2.8E-09 47.9 3.0 35 34-69 77-111 (222)
38 1oy3_D Transcription factor in 97.4 9.1E-05 3.1E-09 48.1 3.2 36 34-69 162-197 (282)
39 1bi7_B P16INK4A, MTS1, multipl 97.4 8.1E-05 2.8E-09 45.8 2.7 36 33-69 81-116 (156)
40 1n0r_A 4ANK, 4 ankyrin repeats 97.4 0.00015 5E-09 41.7 3.6 35 34-69 72-106 (126)
41 1oy3_D Transcription factor in 97.4 9.4E-05 3.2E-09 48.0 3.0 35 34-69 196-230 (282)
42 2xai_A ASB-9, ankyrin repeat a 97.4 0.00012 4E-09 48.5 3.5 35 34-69 40-74 (261)
43 3twr_A Tankyrase-2; ankyrin re 97.4 0.00016 5.4E-09 44.3 3.8 35 34-69 46-80 (165)
44 2l6b_A NR1C; ankyrin, consensu 97.4 9.4E-05 3.2E-09 43.1 2.6 35 34-69 46-80 (115)
45 3f6q_A Integrin-linked protein 97.4 0.00016 5.4E-09 45.1 3.8 35 34-69 43-77 (179)
46 1s70_B 130 kDa myosin-binding 97.4 0.00024 8.2E-09 46.9 4.8 35 34-69 203-237 (299)
47 1sw6_A Regulatory protein SWI6 97.4 0.00013 4.5E-09 50.5 3.7 35 34-69 135-169 (327)
48 3ljn_A Hypothetical protein; a 97.4 9.9E-05 3.4E-09 50.7 3.0 39 31-70 21-59 (364)
49 3lvq_E ARF-GAP with SH3 domain 97.4 0.00012 4E-09 54.0 3.4 38 32-70 134-177 (497)
50 3v31_A Ankyrin repeat family A 97.4 0.00016 5.4E-09 44.3 3.5 35 34-69 40-74 (167)
51 3deo_A Signal recognition part 97.4 0.00012 4E-09 46.3 2.9 36 34-69 80-115 (183)
52 1awc_B Protein (GA binding pro 97.4 0.00016 5.6E-09 44.0 3.5 33 35-68 72-104 (153)
53 3v31_A Ankyrin repeat family A 97.3 0.00015 5E-09 44.5 3.2 35 34-69 73-107 (167)
54 2xai_A ASB-9, ankyrin repeat a 97.3 0.00023 7.9E-09 47.1 4.3 36 34-70 170-205 (261)
55 1awc_B Protein (GA binding pro 97.3 0.00018 6.2E-09 43.8 3.5 35 34-69 38-72 (153)
56 3v30_A DNA-binding protein rfx 97.3 0.00016 5.4E-09 44.5 3.2 35 34-69 106-140 (172)
57 1ikn_D Protein (I-kappa-B-alph 97.3 0.00026 8.8E-09 45.7 4.3 35 34-69 155-189 (236)
58 3hra_A Ankyrin repeat family p 97.3 0.00019 6.6E-09 44.8 3.6 35 34-69 43-77 (201)
59 2dzn_A Probable 26S proteasome 97.3 0.00025 8.7E-09 44.9 4.1 35 34-69 178-213 (228)
60 3f6q_A Integrin-linked protein 97.3 0.00029 1E-08 43.9 4.3 35 34-69 109-143 (179)
61 3v30_A DNA-binding protein rfx 97.3 0.0002 6.9E-09 44.1 3.5 35 34-69 40-74 (172)
62 4b93_B Ankyrin repeat domain-c 97.3 8.5E-05 2.9E-09 50.6 1.9 35 34-69 156-190 (269)
63 2f8y_A Notch homolog 1, transl 97.3 0.00023 7.9E-09 45.1 3.8 35 34-69 29-63 (223)
64 3ui2_A Signal recognition part 97.3 0.00016 5.4E-09 48.1 3.1 34 35-68 82-115 (244)
65 3b7b_A Euchromatic histone-lys 97.3 0.00017 5.9E-09 46.1 3.1 35 34-69 181-215 (237)
66 3t8k_A Uncharacterized protein 97.3 0.00014 4.8E-09 47.5 2.7 35 34-69 42-80 (186)
67 1bd8_A P19INK4D CDK4/6 inhibit 97.3 0.00025 8.7E-09 42.8 3.6 35 34-69 6-41 (156)
68 2etb_A Transient receptor pote 97.3 0.00019 6.4E-09 46.8 3.2 35 34-69 140-177 (256)
69 3utm_A Tankyrase-1; tankyrase, 97.2 0.00021 7.1E-09 47.5 3.2 35 34-69 62-96 (351)
70 1dcq_A PYK2-associated protein 97.2 0.0002 6.9E-09 49.2 3.2 34 35-69 210-243 (278)
71 2rfm_A Putative ankyrin repeat 97.2 0.0002 6.9E-09 44.9 2.9 32 36-68 107-138 (192)
72 3jxi_A Vanilloid receptor-rela 97.2 0.00022 7.5E-09 46.5 3.2 35 34-69 144-181 (260)
73 2f8y_A Notch homolog 1, transl 97.2 0.00024 8.3E-09 45.0 3.2 35 34-69 129-163 (223)
74 2vge_A RELA-associated inhibit 97.2 0.00042 1.4E-08 46.0 4.4 35 34-69 58-92 (229)
75 1ikn_D Protein (I-kappa-B-alph 97.2 0.00023 7.8E-09 45.9 3.0 36 34-69 121-156 (236)
76 3eu9_A Huntingtin-interacting 97.2 0.0002 6.9E-09 45.1 2.7 35 34-69 181-215 (240)
77 1yyh_A HN1;, notch 1, ankyrin 97.2 0.00033 1.1E-08 46.0 3.8 35 34-69 61-95 (253)
78 2y1l_E Darpin-8.4; hydrolase-i 97.2 0.00037 1.3E-08 43.2 3.8 35 34-69 51-85 (169)
79 3d9h_A CDNA FLJ77766, highly s 97.2 0.00017 6E-09 48.7 2.4 35 34-69 63-97 (285)
80 1ycs_B 53BP2, P53BP2; ankyrin 97.2 0.00027 9.3E-09 46.5 3.3 35 34-69 74-108 (239)
81 1k1a_A B-cell lymphoma 3-encod 97.2 0.00036 1.2E-08 44.4 3.7 35 34-69 154-188 (241)
82 3d9h_A CDNA FLJ77766, highly s 97.2 0.00046 1.6E-08 46.6 4.4 36 34-70 226-261 (285)
83 1yyh_A HN1;, notch 1, ankyrin 97.2 0.00024 8.3E-09 46.6 3.0 35 34-69 161-195 (253)
84 3aji_A 26S proteasome non-ATPa 97.2 0.00036 1.2E-08 44.4 3.6 35 34-69 44-78 (231)
85 2pnn_A Transient receptor pote 97.1 0.00029 1E-08 46.5 3.2 36 34-70 152-190 (273)
86 1wdy_A 2-5A-dependent ribonucl 97.1 0.00042 1.4E-08 44.6 3.8 35 34-69 43-77 (285)
87 3b7b_A Euchromatic histone-lys 97.1 0.00039 1.3E-08 44.4 3.6 35 34-69 48-82 (237)
88 2rfm_A Putative ankyrin repeat 97.1 0.0004 1.4E-08 43.6 3.5 35 34-69 72-106 (192)
89 3jxi_A Vanilloid receptor-rela 97.1 0.00027 9.4E-09 46.0 2.9 37 34-70 97-146 (260)
90 3hra_A Ankyrin repeat family p 97.1 0.00044 1.5E-08 43.1 3.7 37 32-69 7-44 (201)
91 3aji_A 26S proteasome non-ATPa 97.1 0.00035 1.2E-08 44.5 3.2 33 35-68 177-209 (231)
92 2etb_A Transient receptor pote 97.1 0.00033 1.1E-08 45.6 3.1 36 34-69 94-141 (256)
93 3ljn_A Hypothetical protein; a 97.1 0.00021 7.3E-09 49.0 2.3 35 34-69 215-249 (364)
94 2dzn_A Probable 26S proteasome 97.1 0.00052 1.8E-08 43.4 3.8 35 34-69 111-145 (228)
95 2pnn_A Transient receptor pote 97.1 0.00036 1.2E-08 46.0 3.0 36 34-69 105-153 (273)
96 2b0o_E UPLC1; arfgap, structur 97.1 0.00035 1.2E-08 48.7 3.0 38 32-70 153-196 (301)
97 3ui2_A Signal recognition part 97.0 0.00043 1.5E-08 46.0 3.2 35 34-69 115-149 (244)
98 2b0o_E UPLC1; arfgap, structur 97.0 0.00042 1.4E-08 48.2 3.2 35 34-69 230-264 (301)
99 3ehr_A Osteoclast-stimulating 97.0 0.00048 1.6E-08 44.2 2.9 35 34-69 110-145 (222)
100 1n11_A Ankyrin; clathrin, BAND 96.9 0.00077 2.6E-08 47.2 3.5 35 34-69 18-52 (437)
101 1n11_A Ankyrin; clathrin, BAND 96.8 0.00075 2.6E-08 47.2 3.2 35 34-69 348-382 (437)
102 1dcq_A PYK2-associated protein 96.8 0.0008 2.7E-08 46.2 3.2 36 34-70 173-211 (278)
103 4hbd_A KN motif and ankyrin re 96.8 0.00081 2.8E-08 45.4 2.9 35 34-69 220-255 (276)
104 3kea_A K1L; tropism, ANK repea 96.7 0.00062 2.1E-08 46.1 2.1 35 34-69 66-100 (285)
105 3lvq_E ARF-GAP with SH3 domain 96.7 0.00069 2.4E-08 49.8 2.3 35 34-69 175-212 (497)
106 4g8k_A 2-5A-dependent ribonucl 96.7 0.0011 3.7E-08 45.0 3.0 35 34-69 243-278 (337)
107 2fo1_E LIN-12 protein; beta-ba 96.6 0.0012 4E-08 46.3 3.0 35 34-69 317-351 (373)
108 3t8k_A Uncharacterized protein 96.5 0.0019 6.5E-08 42.0 3.3 36 34-70 79-121 (186)
109 3jue_A Arfgap with coiled-coil 96.5 0.0017 5.7E-08 47.3 3.2 37 33-69 202-240 (368)
110 2fo1_E LIN-12 protein; beta-ba 96.4 0.0025 8.5E-08 44.6 3.6 35 34-69 170-204 (373)
111 3jue_A Arfgap with coiled-coil 96.4 0.0015 5.3E-08 47.5 2.3 36 34-70 239-274 (368)
112 3kea_A K1L; tropism, ANK repea 96.3 0.0012 4.2E-08 44.6 1.2 37 32-69 163-200 (285)
113 2aja_A Ankyrin repeat family p 91.4 0.014 4.7E-07 42.5 -2.3 36 33-69 166-203 (376)
114 2aja_A Ankyrin repeat family p 73.4 0.66 2.3E-05 33.6 -0.1 36 33-69 95-133 (376)
115 3h3h_A Uncharacterized snoal-l 68.5 4.9 0.00017 23.5 3.1 33 14-51 2-34 (122)
116 3f40_A Uncharacterized NTF2-li 66.0 4.2 0.00014 24.4 2.4 25 27-51 8-32 (114)
117 3i0y_A Putative polyketide cyc 63.2 9.2 0.00032 22.3 3.6 29 25-53 8-36 (140)
118 3fgy_A Uncharacterized NTF2-li 59.9 5.8 0.0002 23.1 2.2 26 27-52 7-32 (135)
119 3en8_A Uncharacterized NTF-2 l 59.5 3.5 0.00012 25.1 1.2 28 27-54 7-34 (128)
120 3rob_A Uncharacterized conserv 55.6 8.7 0.0003 23.9 2.6 30 18-52 15-44 (139)
121 3g8z_A Protein of unknown func 54.3 10 0.00035 23.1 2.7 25 28-52 23-47 (148)
122 3flj_A Uncharacterized protein 53.2 4.8 0.00016 26.5 1.1 26 27-52 20-45 (155)
123 3jtz_A Integrase; four strande 53.1 6.2 0.00021 23.6 1.5 18 42-59 67-84 (88)
124 2bng_A MB2760; epoxide hydrola 53.0 11 0.00038 22.6 2.7 25 27-51 17-41 (149)
125 1oh0_A Steroid delta-isomerase 51.7 13 0.00043 21.3 2.7 26 28-53 10-35 (131)
126 3ec9_A Uncharacterized NTF2-li 50.9 8.3 0.00029 22.7 1.9 24 28-51 15-38 (140)
127 1tuh_A BAL32A, hypothetical pr 50.3 13 0.00044 22.5 2.7 26 27-52 31-56 (156)
128 3r8n_T 30S ribosomal protein S 49.9 20 0.00068 21.9 3.5 24 27-50 26-49 (85)
129 3ebt_A Uncharacterized NTF2-li 49.4 10 0.00036 21.8 2.1 24 28-51 6-29 (132)
130 3dmc_A NTF2-like protein; stru 49.1 5.7 0.0002 24.3 0.9 24 28-51 15-38 (134)
131 2f86_B Hypothetical protein K1 47.1 11 0.00037 23.8 2.1 24 29-52 16-39 (143)
132 3f7x_A Putative polyketide cyc 47.1 12 0.00041 23.0 2.2 27 27-53 22-48 (151)
133 1vej_A Riken cDNA 4931431F19; 46.5 44 0.0015 19.7 5.4 40 19-58 30-73 (74)
134 3k7c_A Putative NTF2-like tran 45.6 14 0.00046 23.8 2.4 21 31-51 13-33 (114)
135 1wxp_A THO complex subunit 1; 45.6 48 0.0017 20.0 5.9 38 27-64 73-110 (110)
136 2vqe_T 30S ribosomal protein S 45.4 27 0.00091 22.2 3.7 24 27-50 33-56 (106)
137 2i1s_A Hypothetical protein; m 44.6 17 0.0006 24.0 2.9 33 29-61 148-183 (188)
138 3fh1_A Uncharacterized NTF2-li 44.2 11 0.00038 22.1 1.7 24 28-51 20-43 (129)
139 1ohp_A Steroid delta-isomerase 43.9 13 0.00045 20.5 1.9 25 28-52 8-32 (125)
140 1z1s_A Hypothetical protein PA 43.0 17 0.00057 22.4 2.4 25 28-52 26-50 (163)
141 3d9r_A Ketosteroid isomerase-l 42.5 24 0.00082 20.1 2.9 25 28-52 14-38 (135)
142 2p1h_A APAF-1, apoptotic prote 42.4 25 0.00084 20.3 3.0 32 23-54 60-93 (94)
143 2vxg_A LD41624, GE-1, CG6181-P 41.8 37 0.0013 22.0 4.1 38 20-58 5-43 (139)
144 1nww_A Limonene-1,2-epoxide hy 41.7 12 0.00039 22.3 1.5 25 28-52 25-49 (149)
145 1s5a_A Hypothetical protein YE 41.6 14 0.00049 21.6 1.9 26 27-52 12-37 (150)
146 3g16_A Uncharacterized protein 40.7 25 0.00087 22.9 3.2 34 13-51 3-36 (156)
147 3m50_P N.plumbaginifolia H+-tr 40.2 13 0.00044 19.3 1.3 18 41-60 9-26 (31)
148 3hk4_A MLR7391 protein; NTF2-l 39.2 24 0.00081 21.9 2.7 27 26-52 21-48 (136)
149 2gex_A SNOL; alpha+beta barrel 38.0 17 0.0006 21.8 1.9 26 27-52 6-31 (152)
150 3fsd_A NTF2-like protein of un 35.2 35 0.0012 20.2 2.9 23 29-51 18-40 (134)
151 2a15_A Hypothetical protein RV 34.5 28 0.00096 20.2 2.4 26 28-53 10-35 (139)
152 2r4i_A Uncharacterized protein 33.3 39 0.0013 18.9 2.8 23 30-52 11-33 (123)
153 3s64_A AC-SLP-1, saposin-like 33.1 17 0.00058 22.3 1.3 21 40-60 61-81 (87)
154 3dm8_A Uncharacterized protein 33.1 24 0.00082 21.2 2.0 24 29-52 8-31 (143)
155 2ux0_A Calcium-calmodulin depe 32.5 41 0.0014 19.7 2.9 26 28-53 16-41 (143)
156 2end_A Endonuclease V; 1.45A { 32.2 33 0.0011 23.0 2.6 24 36-59 65-88 (138)
157 2k54_A Protein ATU0742; protei 32.2 30 0.001 19.8 2.2 26 28-53 6-31 (123)
158 4adn_A FAR1; antibiotic resist 30.3 23 0.00077 25.2 1.7 23 6-28 87-109 (222)
159 3hx8_A MLR2180 protein, putati 29.7 39 0.0013 18.9 2.4 25 28-52 9-33 (129)
160 3d5l_A Regulatory protein RECX 29.6 73 0.0025 21.4 4.1 54 6-59 35-95 (221)
161 1qg9_A Protein (sodium channel 29.4 24 0.00083 17.3 1.3 12 43-54 12-23 (26)
162 3ju0_A Phage integrase; four s 29.4 27 0.00092 21.6 1.8 16 43-58 68-83 (108)
163 3bb9_A Putative orphan protein 29.3 58 0.002 19.4 3.3 24 29-52 34-57 (148)
164 3k0z_A Putative polyketide cyc 28.8 49 0.0017 20.3 2.9 34 17-52 28-61 (159)
165 3gwr_A Putative calcium/calmod 27.2 63 0.0022 19.9 3.3 25 29-53 12-36 (144)
166 3f8x_A Putative delta-5-3-keto 26.9 11 0.00037 24.1 -0.5 25 27-51 22-46 (148)
167 3f8h_A Putative polyketide cyc 26.8 21 0.00073 21.9 1.0 26 28-53 21-46 (150)
168 2gey_A ACLR protein; alpha+bet 26.7 27 0.00092 21.2 1.4 25 27-51 6-30 (158)
169 4h3u_A Hypothetical protein; s 26.3 32 0.0011 20.8 1.7 25 27-51 27-51 (158)
170 3f7s_A Uncharacterized NTF2-li 26.1 48 0.0016 19.4 2.4 30 18-52 6-35 (142)
171 2g5c_A Prephenate dehydrogenas 26.0 57 0.002 21.5 3.0 24 30-53 251-274 (281)
172 4hur_A Virginiamycin A acetylt 26.0 1.3E+02 0.0044 19.6 4.8 37 16-52 173-216 (220)
173 3c9p_A Uncharacterized protein 25.7 55 0.0019 21.6 2.8 52 4-55 1-58 (123)
174 3f14_A Uncharacterized NTF2-li 25.6 13 0.00044 21.6 -0.2 22 30-51 5-26 (112)
175 1ej5_A WAsp, wiskott-aldrich s 24.6 1.3E+02 0.0046 18.7 4.5 47 9-57 27-73 (107)
176 3a6m_A Protein GRPE, HSP-70 co 24.6 8.3 0.00028 26.1 -1.4 10 52-61 124-133 (177)
177 3ff2_A Uncharacterized cystati 24.2 43 0.0015 19.1 1.9 24 28-51 5-28 (117)
178 3cqc_A Nuclear pore complex pr 23.7 36 0.0012 24.1 1.7 27 27-57 238-264 (270)
179 2lnh_A N-WAsp, neural wiskott- 23.7 36 0.0012 19.7 1.4 36 9-46 28-63 (65)
180 3mso_A Steroid delta-isomerase 23.4 13 0.00045 23.0 -0.5 25 27-51 11-35 (143)
181 3b1f_A Putative prephenate deh 22.8 72 0.0025 21.1 3.0 24 30-53 259-282 (290)
182 3pys_P 30S ribosomal protein S 22.7 48 0.0017 20.1 2.0 17 41-57 51-67 (83)
183 2rcd_A Uncharacterized protein 22.2 1.1E+02 0.0036 17.8 3.5 25 29-53 18-42 (129)
184 3t5x_A PCI domain-containing p 21.7 64 0.0022 21.4 2.6 24 30-53 82-105 (203)
185 1r71_A Transcriptional repress 21.6 49 0.0017 22.0 2.0 46 21-66 99-151 (178)
186 1z96_A DNA-damage, UBA-domain 21.6 28 0.00096 17.1 0.6 15 43-57 5-19 (40)
187 3ehc_A Snoal-like polyketide c 21.5 19 0.00064 20.9 -0.1 24 28-51 6-29 (128)
188 3sxm_A Transcriptional regulat 21.3 87 0.003 18.1 2.9 23 30-52 102-124 (140)
189 3h51_A Putative calcium/calmod 21.3 60 0.002 19.5 2.2 32 16-52 16-47 (156)
190 3c8l_A FTSZ-like protein of un 21.2 34 0.0012 22.3 1.1 30 26-57 22-52 (122)
191 2uy1_A Cleavage stimulation fa 20.8 77 0.0026 23.2 3.1 31 25-55 12-42 (493)
192 4h62_V Mediator of RNA polymer 20.7 46 0.0016 16.9 1.3 12 15-26 7-18 (31)
193 3ggo_A Prephenate dehydrogenas 20.2 56 0.0019 22.8 2.1 25 29-53 282-306 (314)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.44 E-value=1.7e-07 Score=60.84 Aligned_cols=37 Identities=24% Similarity=0.350 Sum_probs=34.4
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 32 KRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 32 ~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+.++.|++.|+.+.|..||++|.|||..| ..|+|||+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d-~~g~t~l~ 42 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASD-SDGRTPLH 42 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHH
Confidence 45899999999999999999999999999 59999986
No 2
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.39 E-value=1.5e-07 Score=64.17 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=34.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
++.||+.|+++-|..||++|.|||..|.+.|.|||++
T Consensus 29 L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~ 65 (337)
T 4g8k_A 29 LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHN 65 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHH
Confidence 8999999999999999999999999997789999973
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=97.95 E-value=1.3e-05 Score=48.39 Aligned_cols=36 Identities=25% Similarity=0.305 Sum_probs=32.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
+..|+..|+.+-|..|+++|.|||..| ..|.|||++
T Consensus 16 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~ 51 (136)
T 1d9s_A 16 LATAAARGQVETVRQLLEAGADPNALN-RFGRRPIQV 51 (136)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCTTTTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcCCcC-CCCCCHHHH
Confidence 678999999999999999999999988 599999974
No 4
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=97.92 E-value=9.3e-06 Score=46.29 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=23.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|+++|.|||..| ..|+|||+
T Consensus 39 L~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~t~l~ 73 (93)
T 1n0q_A 39 LHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLH 73 (93)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHH
Confidence 556666666666666667777777666 46676664
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=97.90 E-value=1.1e-05 Score=47.75 Aligned_cols=36 Identities=25% Similarity=0.322 Sum_probs=21.5
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 33 RFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 33 df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
-|+.|+..|+.+.|..|+++|.|+|..| ..|+|||+
T Consensus 10 ~l~~A~~~~~~~~v~~ll~~~~~~~~~~-~~g~t~L~ 45 (123)
T 3aaa_C 10 EFMWALKNGDLDEVKDYVAKGEDVNRTL-EGGRKPLH 45 (123)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSCC-TTSSCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcCccC-CCCCcHHH
Confidence 3555666666666666666666666655 35666654
No 6
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=97.86 E-value=1.9e-05 Score=48.68 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=34.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 31 LKRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 31 ~~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
..-++.|+..|+.+-|..|+++|.|+|..| ..|.|||++
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~ 51 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEAGANPNAPN-SYGRRPIQV 51 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCTTCCC-SSSCCTTTS
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHH
Confidence 335788999999999999999999999998 599999974
No 7
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=97.84 E-value=1e-05 Score=52.31 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=23.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-||++|.|||..| ..|+|||+
T Consensus 74 Lh~A~~~g~~~~v~~Ll~~gadvn~~d-~~G~TpLh 108 (169)
T 4gpm_A 74 LHHAAENGHKEVVKLLISKGADVNAKD-SDGRTPLH 108 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCcCCCCCCC-CCCCCHHH
Confidence 455666667666666667777777666 46777665
No 8
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=97.80 E-value=1.8e-05 Score=47.80 Aligned_cols=38 Identities=29% Similarity=0.255 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 31 LKRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 31 ~~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
..-|+.|+..|+.+-|..|++.|.|+|..| ..|+|||+
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 52 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADVNAKD-EYGLTPLY 52 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 344677777777777777777777777777 47777775
No 9
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=97.79 E-value=1.7e-05 Score=45.20 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=32.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++.|.|+|..| ..|+|||+
T Consensus 6 L~~A~~~~~~~~v~~Ll~~g~~~n~~d-~~g~t~L~ 40 (93)
T 1n0q_A 6 LHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLH 40 (93)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHH
Confidence 567899999999999999999999999 59999996
No 10
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=97.76 E-value=1.7e-05 Score=46.85 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=24.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
++.|+..|+.+-|..|++.|.|+|..| ..|+|||+
T Consensus 28 L~~A~~~g~~~~v~~Ll~~g~~i~~~d-~~g~tpLh 62 (110)
T 2zgd_A 28 LLEAARAGQDDEVRILMANGADVAAKD-KNGSTPLH 62 (110)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHH
Confidence 566777777777777777777777776 47777765
No 11
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=97.73 E-value=2.2e-05 Score=46.50 Aligned_cols=35 Identities=23% Similarity=0.078 Sum_probs=25.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|++.|.|+|..| ..|+|||+
T Consensus 44 L~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~tpL~ 78 (123)
T 3aaa_C 44 LHYAADCGQLEILEFLLLKGADINAPD-KHHITPLL 78 (123)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCCCHHH
Confidence 566777777777777777777777777 47777775
No 12
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=97.72 E-value=3.5e-05 Score=47.89 Aligned_cols=42 Identities=21% Similarity=0.162 Sum_probs=31.3
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+.....-+..|++.|+.+-|..|++.|.|+|..| ..|+|||+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 52 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAED-ASGWTPLH 52 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHH
Confidence 3344556788888888888888888888888877 58888875
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=97.71 E-value=3.8e-05 Score=52.37 Aligned_cols=36 Identities=14% Similarity=0.013 Sum_probs=27.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
+..|+..|+.+-|.-||++|.|||..| ..|+|||++
T Consensus 189 Lh~A~~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~ 224 (269)
T 4b93_B 189 LHEAVIEKHVFVVELLLLHGASVQVLN-KRQRTAVDC 224 (269)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCC-TTSCCSGGG
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHH
Confidence 556777888877777788888888877 478888763
No 14
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=97.69 E-value=4e-05 Score=44.69 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=18.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+.|..|++.|.|+|..| ..|.|||+
T Consensus 13 L~~A~~~~~~~~~~~Ll~~g~~~~~~d-~~g~t~L~ 47 (115)
T 2l6b_A 13 LHNAAKNGHAEEVKKLLSKGADVNARS-KDGNTPLH 47 (115)
T ss_dssp HHHHHHHTCHHHHHHHTTTTCCSSCCC-SSSCCTTH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 344555555555555555555555555 35555553
No 15
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=97.66 E-value=3.3e-05 Score=46.91 Aligned_cols=37 Identities=11% Similarity=0.174 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 32 KRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 32 ~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
.-++.|+..|+.+.|..|+++|.|+|..| ..|+|||+
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~ 43 (162)
T 1ihb_A 7 NELASAAARGDLEQLTSLLQNNVNVNAQN-GFGRTALQ 43 (162)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTCCC-TTSCCHHH
T ss_pred hHHHHHHHcCCHHHHHHHHhCCCCccccC-ccCccHHH
Confidence 45788999999999999999999999888 58999885
No 16
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=97.60 E-value=3e-05 Score=51.24 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=28.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
|+.|+..|+.+.|..|+++|.|+|..| ..|.|||+
T Consensus 44 l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 78 (299)
T 1s70_B 44 FLAACSSGDTEEVLRLLERGADINYAN-VDGLTALH 78 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHHCCCTTCBC-TTCCBHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHH
Confidence 777888888888888888888888877 47888875
No 17
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=97.58 E-value=6e-05 Score=45.17 Aligned_cols=34 Identities=18% Similarity=0.141 Sum_probs=17.0
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 35 LEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 35 ~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
..|+..|+.+-|..|++.|.|+|..| ..|.|||+
T Consensus 15 ~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~ 48 (137)
T 3c5r_A 15 HIASIKGDIPSVEYLLQNGSDPNVKD-HAGWTPLH 48 (137)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCC-TTSCCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcCC-CCCCCHHH
Confidence 34445555555555555555555544 34555543
No 18
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=97.58 E-value=6.6e-05 Score=45.46 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=29.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|+|||+
T Consensus 72 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 106 (156)
T 1bd8_A 72 VHDAARTGFLDTLKVLVEHGADVNVPD-GTGALPIH 106 (156)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCC-TTSCCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCCcC-CCCCcHHH
Confidence 677888888888888888888888888 58888886
No 19
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=97.57 E-value=9.9e-05 Score=44.20 Aligned_cols=35 Identities=17% Similarity=0.071 Sum_probs=27.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|++.|.|||..| ..|+|||.
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~ 114 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVN-IFGLRPVD 114 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCGGG
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHH
Confidence 566777888887777888888888877 47888875
No 20
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=97.57 E-value=3.4e-05 Score=50.85 Aligned_cols=38 Identities=13% Similarity=0.196 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 31 LKRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 31 ~~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
.--++.|+..|+.+-|..|+++|.|||..| ..|.|||+
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~ 75 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRIIYEVDDPSLPN-DEGITALH 75 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHTSTTSSCCCCC-TTSCCHHH
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 344788889999999999999999999888 58999986
No 21
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=97.56 E-value=3.8e-05 Score=51.13 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=22.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
++.|+..|+.+-|..|+++|.|||..| ..|+|||+
T Consensus 25 L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~tpLh 59 (229)
T 2vge_A 25 LLDAALTGELEVVQQAVKEMNDPSQPN-EEGITALH 59 (229)
T ss_dssp HHHHHHHTCHHHHHHHHHHSSCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCCHHH
Confidence 555666666666666666666666666 46666664
No 22
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=97.55 E-value=0.00011 Score=44.96 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=23.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|++.|.|||..| ..|+|||.
T Consensus 112 L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~ 146 (165)
T 3twr_A 112 LHEAAAKGKYEICKLLLQHGADPTKKN-RDGNTPLD 146 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCTGG
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCChhH
Confidence 455666667766666667777777666 46777765
No 23
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=97.54 E-value=5.2e-05 Score=48.55 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=30.0
Q ss_pred HHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAK-GLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~k-GlDPN~~d~~~GeTpL~ 69 (70)
++.|+..|+.+.|..|+++ |.|+|..| ..|+|||+
T Consensus 7 L~~A~~~g~~~~v~~Ll~~~g~~~~~~~-~~g~t~L~ 42 (232)
T 2rfa_A 7 LLLAAKENDVQALSKLLKFEGCEVHQRG-AMGETALH 42 (232)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCSCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCcccCC-CCCCCHHH
Confidence 5678889999999999987 99999888 58999886
No 24
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=97.52 E-value=7.6e-05 Score=42.96 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=27.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-+.-|++.|.|||..| ..|+|||+
T Consensus 39 L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~ 73 (126)
T 1n0r_A 39 LHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLH 73 (126)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCcccC-CCCCcHHH
Confidence 667778888887777888888888777 47888875
No 25
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=97.51 E-value=8.8e-05 Score=46.75 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=29.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
++.|++.|+.+.|..|+++|.|+|..| ..|.|||+
T Consensus 13 l~~A~~~g~~~~~~~Ll~~g~~~~~~~-~~g~t~L~ 47 (240)
T 3eu9_A 13 IVKATQYGIYERCRELVEAGYDVRQPD-KENVTLLH 47 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCChHHHHHHHHcCCCcCCCC-CCCCCHHH
Confidence 678888899988888889999988888 58888885
No 26
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=97.50 E-value=0.00013 Score=48.48 Aligned_cols=51 Identities=14% Similarity=0.072 Sum_probs=35.8
Q ss_pred CHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCccccc
Q psy15934 18 DEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCAK-GLDPNFHCPETGEMVAL 69 (70)
Q Consensus 18 ~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~k-GlDPN~~d~~~GeTpL~ 69 (70)
+...-..+..+.....++.|+..|+.+.|..||.. |.|+|..| ..|+|||+
T Consensus 12 ~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d-~~g~t~L~ 63 (351)
T 3utm_A 12 DPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASD-GRKSTPLH 63 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSS-TTCCCHHH
T ss_pred CCceeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCC-CCCCCHHH
Confidence 33444445555556678888888888888888765 88888777 47888875
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=97.50 E-value=6.2e-05 Score=48.18 Aligned_cols=35 Identities=17% Similarity=0.037 Sum_probs=32.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 125 L~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~t~L~ 159 (232)
T 2rfa_A 125 LSFAACVGSEEIVRLLIEHGADIRAQD-SLGNTVLH 159 (232)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHH
Confidence 678999999999999999999999999 69999996
No 28
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=97.49 E-value=9.8e-05 Score=47.52 Aligned_cols=36 Identities=25% Similarity=0.337 Sum_probs=18.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
++.|++.|+.+.|..|+++|.|+|..+...|.|||+
T Consensus 9 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 44 (285)
T 1wdy_A 9 LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLH 44 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHH
Confidence 445555555555555555555555553345555553
No 29
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=97.47 E-value=0.00012 Score=50.74 Aligned_cols=36 Identities=14% Similarity=0.089 Sum_probs=33.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
+..|+..|+.+-|.-||++|.|||..| ..|.|||++
T Consensus 287 Lh~A~~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~ 322 (327)
T 1sw6_A 287 LNIAARLGNISIVDALLDYGADPFIAN-KSGLRPVDF 322 (327)
T ss_dssp HHHHHHHCCHHHHHHHHHTTCCTTCCC-TTSCCGGGG
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHH
Confidence 778999999999999999999999999 699999974
No 30
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=97.47 E-value=7.8e-05 Score=44.89 Aligned_cols=35 Identities=9% Similarity=0.064 Sum_probs=29.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|+++|.|||..| ..|+|||+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~ 116 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCD-AWGRLPVD 116 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCS-SSSSCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHH
Confidence 567888888888888888888888888 58888885
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=97.46 E-value=0.00017 Score=45.94 Aligned_cols=35 Identities=9% Similarity=0.127 Sum_probs=22.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||.
T Consensus 187 L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~ 221 (241)
T 1k1a_A 187 LHSASGRGLLPLVRTLVRSGADSSLKN-CHNDTPLM 221 (241)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCTTT
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCcC-CCCCCHHH
Confidence 345566666666666666666666666 46666665
No 32
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=97.45 E-value=0.00011 Score=44.52 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=27.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-+.-|+++|.|||..| ..|+|||+
T Consensus 74 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 108 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLEFQADVNIED-NEGNLPLH 108 (162)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 567777888888888888888888877 48888875
No 33
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=97.45 E-value=0.00011 Score=44.15 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=20.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|++.|.|+|..| ..|+|||+
T Consensus 51 L~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~t~L~ 85 (136)
T 2jab_A 51 LYLATAHGHLEIVEVLLKNGADVNAVD-AIGFTPLH 85 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCCCHHH
Confidence 445556666666666666666666655 35666654
No 34
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=97.45 E-value=9.9e-05 Score=43.49 Aligned_cols=35 Identities=17% Similarity=0.107 Sum_probs=32.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|+|..| ..|.|||+
T Consensus 61 Lh~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~ 95 (110)
T 2zgd_A 61 LHLAARNGHLEVVKLLLEAGADVXAQD-KFGKTAFD 95 (110)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccc-cCCCcHHH
Confidence 678999999999999999999999999 59999986
No 35
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=97.44 E-value=8.6e-05 Score=46.90 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=16.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
++.|+..|+.+.|..|++ |.|||..| ..|.|||+
T Consensus 48 L~~A~~~g~~~~v~~Ll~-~~~~~~~d-~~g~t~L~ 81 (183)
T 3deo_A 48 WWTAARKADEQALSQLLE-DRDVDAVD-ENGRTALL 81 (183)
T ss_dssp HHHHHHTTCHHHHHHHTT-TSCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHh-cCCCCCcC-CCCCCHHH
Confidence 444555555555555554 55555544 34555543
No 36
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=97.44 E-value=8.4e-05 Score=50.32 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=30.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++.|.|||..| ..|+|||+
T Consensus 187 Lh~A~~~g~~~~v~~Ll~~gad~n~~d-~~G~TpLh 221 (276)
T 4hbd_A 187 LMLAVSHGRVDVVKALLACEADVNVQD-DDGSTALM 221 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCCHHH
Confidence 667888999998888999999999888 58999986
No 37
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=97.44 E-value=8.3e-05 Score=47.88 Aligned_cols=35 Identities=9% Similarity=0.028 Sum_probs=25.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
++.|+..|+.+-|..|++.|.|+|..| ..|.|||+
T Consensus 77 L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 111 (222)
T 3ehr_A 77 LHEAAKRGNLSWLRECLDNRVGVNGLD-KAGSTALY 111 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred cccccccCcHHHHHHHHhCCCCccccC-CCCCCHHH
Confidence 566777777777777777777777777 47777775
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=97.44 E-value=9.1e-05 Score=48.08 Aligned_cols=36 Identities=22% Similarity=0.144 Sum_probs=20.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..+...|.|||+
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 197 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH 197 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHH
Confidence 455556666666666666666666555434666654
No 39
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=97.42 E-value=8.1e-05 Score=45.79 Aligned_cols=36 Identities=8% Similarity=0.072 Sum_probs=30.4
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 33 RFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 33 df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
=+..|+..|+.+-|.-|+++|.|||..| ..|+|||+
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~ 116 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGARLDVRD-AWGRLPVD 116 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSSCCC-TTCCCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCcccC-CCCCCHHH
Confidence 3677888899988888899999999888 58999886
No 40
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=97.41 E-value=0.00015 Score=41.74 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=28.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-+.-|+++|.|||..| ..|+|||.
T Consensus 72 l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~ 106 (126)
T 1n0r_A 72 LHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLH 106 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcChHHHHHHHHHcCCCCcccC-CCCCCHHH
Confidence 667788888888888888888888887 58888875
No 41
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=97.41 E-value=9.4e-05 Score=48.02 Aligned_cols=35 Identities=17% Similarity=0.106 Sum_probs=32.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-||++|.|||..| ..|.|||+
T Consensus 196 L~~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~tpL~ 230 (282)
T 1oy3_D 196 LHLAVEAQAASVLELLLKAGADPTARM-YGGRTPLG 230 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccc-cCCCCHHH
Confidence 778999999999999999999999999 69999996
No 42
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=97.40 E-value=0.00012 Score=48.51 Aligned_cols=35 Identities=11% Similarity=-0.013 Sum_probs=19.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|+|..| ..|.|||+
T Consensus 40 L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 74 (261)
T 2xai_A 40 LHEACLGGHLSCVKILLKHGAQVNGVT-ADWHTPLF 74 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHH
Confidence 445555555555555555555555555 35555553
No 43
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=97.40 E-value=0.00016 Score=44.28 Aligned_cols=35 Identities=14% Similarity=0.064 Sum_probs=21.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 46 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 80 (165)
T 3twr_A 46 LHFAAGYNRVSVVEYLLQHGADVHAKD-KGGLVPLH 80 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcChHHHHHHHHhcCCCCCccC-CCCCCHHH
Confidence 455666666666666666666666666 36666664
No 44
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=97.39 E-value=9.4e-05 Score=43.08 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=31.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-+.-|++.|.|+|..| ..|.|||+
T Consensus 46 L~~A~~~~~~~~~~~Ll~~g~~~~~~d-~~g~tpl~ 80 (115)
T 2l6b_A 46 LHLAAKNGHAEIVKLLLAKGADVNARS-KDGNTPEH 80 (115)
T ss_dssp THHHHTTTCHHHHHHHTTTTCCTTCCC-TTCCCTTH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCcccC-CCCCCHHH
Confidence 677899999999999999999999998 59999986
No 45
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=97.39 E-value=0.00016 Score=45.10 Aligned_cols=35 Identities=9% Similarity=0.007 Sum_probs=20.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 43 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 77 (179)
T 3f6q_A 43 LHWACREGRSAVVEMLIMRGARINVMN-RGDDTPLH 77 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 445555666655555666666666555 35666554
No 46
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=97.38 E-value=0.00024 Score=46.89 Aligned_cols=35 Identities=14% Similarity=-0.016 Sum_probs=20.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++.|.|||..| ..|.|||+
T Consensus 203 L~~A~~~g~~~~v~~Ll~~g~d~~~~d-~~g~tpL~ 237 (299)
T 1s70_B 203 LHVAAAKGYTEVLKLLIQARYDVNIKD-YDGWTPLH 237 (299)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHCCcHHHHHHHHHcCCCCCCcC-CCCCcHHH
Confidence 555566666666666666666666655 35666654
No 47
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=97.38 E-value=0.00013 Score=50.45 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=32.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-||++|.|||..| ..|+|||+
T Consensus 135 Lh~Aa~~g~~~~v~~Ll~~Gad~n~~d-~~g~TpLh 169 (327)
T 1sw6_A 135 LHWLTSIANLELVKHLVKHGSNRLYGD-NMGESCLV 169 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTBCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 678999999999999999999999999 59999997
No 48
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=97.38 E-value=9.9e-05 Score=50.67 Aligned_cols=39 Identities=13% Similarity=0.313 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 31 LKRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 31 ~~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
.--++.|+..|+.+-|..|+++|.|||..| ..|.|||++
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~ 59 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVSPTIQN-RFGCTALHL 59 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTCCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCcHHHH
Confidence 445889999999999999999999999999 599999973
No 49
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=97.36 E-value=0.00012 Score=53.97 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=34.5
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCCC------CCCCCcccccC
Q psy15934 32 KRFLEYVNNSQVEKIAKLCAKGLDPNFH------CPETGEMVALI 70 (70)
Q Consensus 32 ~df~~aV~~~~~~kV~kLL~kGlDPN~~------d~~~GeTpL~L 70 (70)
..++.||..|+.+.|..||+.|.|+|.. | ..|.|||++
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~-~~g~t~Lh~ 177 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQ-APEELVLHL 177 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSC-CSCBCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccc-cccchHHHH
Confidence 5699999999999999999999999987 6 589999973
No 50
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=97.36 E-value=0.00016 Score=44.34 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=27.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|+|||+
T Consensus 40 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 74 (167)
T 3v31_A 40 LMWAAAHGQIAVVEFLLQNGADPQLLG-KGRESALS 74 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCcC-CCCCcHHH
Confidence 677788888888888888888888777 57888875
No 51
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=97.36 E-value=0.00012 Score=46.29 Aligned_cols=36 Identities=14% Similarity=0.035 Sum_probs=18.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..|...|+|||+
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 80 LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHH
Confidence 444555555555555555555555554334555553
No 52
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=97.35 E-value=0.00016 Score=43.99 Aligned_cols=33 Identities=12% Similarity=-0.002 Sum_probs=14.7
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccc
Q psy15934 35 LEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVA 68 (70)
Q Consensus 35 ~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL 68 (70)
..|+..|+.+-|.-|+++|.|||..| ..|+|||
T Consensus 72 ~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L 104 (153)
T 1awc_B 72 HMAASEGHANIVEVLLKHGADVNAKD-MLKMTAL 104 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCC-TTSCCHH
T ss_pred HHHHHcChHHHHHHHHHcCCCCCCCC-CCCCCHH
Confidence 33444444444444444444444444 2444444
No 53
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=97.34 E-value=0.00015 Score=44.51 Aligned_cols=35 Identities=17% Similarity=0.048 Sum_probs=23.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|++.|.|+|..| ..|+|||+
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 107 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCGVDVNEYD-WNGGTPLL 107 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcCC-CCCCCHHH
Confidence 556666677766666667777777666 46777664
No 54
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=97.33 E-value=0.00023 Score=47.09 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=29.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
+..|+..++.+-|.-|+++|.|||..| ..|.|||++
T Consensus 170 Lh~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~tpl~~ 205 (261)
T 2xai_A 170 LHAVARTASEELACLLMDFGADTQAKN-AEGKRPVEL 205 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCGGGG
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCChhhh
Confidence 556778888888888888888888888 588888863
No 55
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=97.33 E-value=0.00018 Score=43.78 Aligned_cols=35 Identities=6% Similarity=0.002 Sum_probs=27.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++.|.|||..| ..|+|||+
T Consensus 38 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 72 (153)
T 1awc_B 38 LHLAAQYGHFSTTEVLLRAGVSRDART-KVDRTPLH 72 (153)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHH
Confidence 566777888888888888888888777 47888875
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=97.32 E-value=0.00016 Score=44.54 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=19.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|+++|.|||..| ..|.|||+
T Consensus 106 L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~ 140 (172)
T 3v30_A 106 LLYAVRGNHVKCVEALLARGADLTTEA-DSGYTPMD 140 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHH
Confidence 444555555555555555555555555 35555553
No 57
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=97.32 E-value=0.00026 Score=45.65 Aligned_cols=35 Identities=17% Similarity=-0.003 Sum_probs=20.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 155 L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~ 189 (236)
T 1ikn_D 155 LHLAVDLQNPDLVSLLLKCGADVNRVT-YQGYSPYQ 189 (236)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCSCCCC-TTCCCGGG
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccc-CCCCCHHH
Confidence 344555566655555566666666555 35666654
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=97.32 E-value=0.00019 Score=44.75 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=26.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 43 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~ 77 (201)
T 3hra_A 43 LNIAVHNNDIEIAKALIDRGADINLQN-SISDSPYL 77 (201)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHH
Confidence 566777788877777788888888777 47777775
No 59
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=97.31 E-value=0.00025 Score=44.87 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=24.9
Q ss_pred HHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLC-AKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL-~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|+ +.|.|||..| ..|.|||.
T Consensus 178 L~~A~~~~~~~~v~~Ll~~~ga~~~~~~-~~g~t~l~ 213 (228)
T 2dzn_A 178 LFHALAEGHGDAAVLLVEKYGAEYDLVD-NKGAKAED 213 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHCCCSCCBC-TTSCBGGG
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCCCccC-CCCCcHHH
Confidence 45667777777777777 6777777777 47777775
No 60
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=97.31 E-value=0.00029 Score=43.87 Aligned_cols=35 Identities=20% Similarity=0.023 Sum_probs=18.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|+++|.|||..| ..|+|||.
T Consensus 109 L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~ 143 (179)
T 3f6q_A 109 LHYACFWGQDQVAEDLVANGALVSICN-KYGEMPVD 143 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSSBCC-TTSCCGGG
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcchhc-cCCCCcHH
Confidence 344555555555555555555555555 35555553
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=97.30 E-value=0.0002 Score=44.07 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=21.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|+|||+
T Consensus 40 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 74 (172)
T 3v30_A 40 LIWASAFGEIETVRFLLEWGADPHILA-KERESALS 74 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCchhhc-ccCCCHHH
Confidence 455666666666666666666666666 36666654
No 62
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=97.30 E-value=8.5e-05 Score=50.64 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=26.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
++.|+..|+.+-|.-||++|.|||..| ..|.|||+
T Consensus 156 L~~A~~~g~~~~v~~Ll~~gadvn~~~-~~g~t~Lh 190 (269)
T 4b93_B 156 LIYACSGGHHELVALLLQHGASINASN-NKGNTALH 190 (269)
T ss_dssp HHHHHHTTCGGGHHHHHHTTCCTTCBC-TTSCBHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCCCCccc-cCCCcHHH
Confidence 566777788877777778888888777 47888875
No 63
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=97.29 E-value=0.00023 Score=45.07 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=30.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|..|+++|.|||..| ..|.|||+
T Consensus 29 L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 63 (223)
T 2f8y_A 29 LHLAARYSRSDAAKRLLEASADANIQD-NMGRTPLH 63 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 677899999999999999999999888 58999986
No 64
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=97.28 E-value=0.00016 Score=48.12 Aligned_cols=34 Identities=15% Similarity=0.036 Sum_probs=14.3
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccc
Q psy15934 35 LEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVA 68 (70)
Q Consensus 35 ~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL 68 (70)
..|+..|+.+-|.-|++.|.|||..|...|.|||
T Consensus 82 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L 115 (244)
T 3ui2_A 82 LFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTAL 115 (244)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence 3344444444444444444444444322344444
No 65
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=97.28 E-value=0.00017 Score=46.06 Aligned_cols=35 Identities=9% Similarity=0.111 Sum_probs=19.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+.-|+..++.+-|.-|+++|.|||..| ..|+|||+
T Consensus 181 L~~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~t~l~ 215 (237)
T 3b7b_A 181 LHIAARENRYDCVVLFLSRDSDVTLKN-KEGETPLQ 215 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHhCCHhHHHHHHHcCCCCCccC-CCCCCHHH
Confidence 344555555555555555555555555 35555553
No 66
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=97.28 E-value=0.00014 Score=47.47 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=29.0
Q ss_pred HHHHHHcCCHH----HHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVE----KIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~----kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+ -|.-||++|.|||..| ..|+|||+
T Consensus 42 Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-~~g~TpLh 80 (186)
T 3t8k_A 42 LYDVLRNNNDEARYKISMFLINKGADIKSRT-KEGTTLFF 80 (186)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-TTCCCTHH
T ss_pred HHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-CCCCcHHH
Confidence 67788888865 3555789999999999 69999996
No 67
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=97.26 E-value=0.00025 Score=42.83 Aligned_cols=35 Identities=11% Similarity=0.178 Sum_probs=18.7
Q ss_pred HHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAK-GLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~k-GlDPN~~d~~~GeTpL~ 69 (70)
++.|+..|+.+.|..|+++ |.|||..| ..|+|||+
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~ 41 (156)
T 1bd8_A 6 LSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQ 41 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCCTTCCC-TTSCCHHH
T ss_pred HHHHHHhCCHHHHHHHHHhhCcCccccC-CCCCcHHH
Confidence 4555555555555555555 33555555 35555553
No 68
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=97.26 E-value=0.00019 Score=46.83 Aligned_cols=35 Identities=11% Similarity=-0.025 Sum_probs=32.4
Q ss_pred HHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCA---KGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~---kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++ .|.|||..| ..|+|||+
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d-~~g~TpLh 177 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQPASLEATD-SLGNTVLH 177 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCcCccC-CCCCCHHH
Confidence 677999999999999999 999999999 59999996
No 69
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=97.23 E-value=0.00021 Score=47.47 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=27.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 62 L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 96 (351)
T 3utm_A 62 LHLAAGYNRVRIVQLLLQHGADVHAKD-KGGLVPLH 96 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCcHHH
Confidence 667788888888888888888888877 47888875
No 70
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=97.23 E-value=0.0002 Score=49.23 Aligned_cols=34 Identities=15% Similarity=-0.015 Sum_probs=17.6
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 35 LEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 35 ~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
..|+..|+.+-|.-||+.|.|||..| ..|+|||+
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~tpL~ 243 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIAN-ESGETPLD 243 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcc-CCCCCHHH
Confidence 34555555555555555555555555 35555553
No 71
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=97.23 E-value=0.0002 Score=44.94 Aligned_cols=32 Identities=19% Similarity=-0.057 Sum_probs=13.1
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccc
Q psy15934 36 EYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVA 68 (70)
Q Consensus 36 ~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL 68 (70)
.|+..++.+-+.-|++.|.|||..| ..|.|||
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L 138 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRN-LEGETPL 138 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCC-TTCCCHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHH
Confidence 3344444444444444444444443 2444443
No 72
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=97.23 E-value=0.00022 Score=46.46 Aligned_cols=35 Identities=17% Similarity=0.033 Sum_probs=32.4
Q ss_pred HHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCA---KGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~---kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++ +|.|+|..| ..|+|||+
T Consensus 144 L~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d-~~g~TpLh 181 (260)
T 3jxi_A 144 LSLAACTNQPHIVHYLTENGHKQADLRRQD-SRGNTVLH 181 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCCcccC-CCCCcHHH
Confidence 678999999999999999 999999999 59999996
No 73
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=97.21 E-value=0.00024 Score=44.96 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=18.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|+++|.|||..| ..|+|||+
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 163 (223)
T 2f8y_A 129 LHWAAAVNNVDAAVVLLKNGANKDMQN-NREETPLF 163 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCcCHHH
Confidence 344555555555555555555555555 35555553
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=97.20 E-value=0.00042 Score=46.04 Aligned_cols=35 Identities=11% Similarity=0.013 Sum_probs=17.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|+|||+
T Consensus 58 Lh~A~~~g~~~~v~~Ll~~ga~~n~~d-~~g~tpLh 92 (229)
T 2vge_A 58 LHNAICGANYSIVDFLITAGANVNSPD-SHGWTPLH 92 (229)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHH
Confidence 444555555555555555555555555 25555543
No 75
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=97.20 E-value=0.00023 Score=45.90 Aligned_cols=36 Identities=17% Similarity=0.100 Sum_probs=32.4
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|+|..|...|.|||+
T Consensus 121 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 121 LHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156 (236)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Confidence 678899999999999999999999998448999996
No 76
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=97.19 E-value=0.0002 Score=45.08 Aligned_cols=35 Identities=17% Similarity=0.043 Sum_probs=32.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|+++|.|||..| ..|+|||+
T Consensus 181 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~ 215 (240)
T 3eu9_A 181 LHWAVLAGNTTVISLLLEAGANVDAQN-IKGESALD 215 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCBC-TTSCBHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 678999999999999999999999998 69999986
No 77
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=97.19 E-value=0.00033 Score=46.01 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=32.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 61 L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 95 (253)
T 1yyh_A 61 LHLAARYSRSDAAKRLLEASADANIQD-NMGRTPLH 95 (253)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHH
Confidence 778999999999999999999999998 69999986
No 78
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=97.18 E-value=0.00037 Score=43.16 Aligned_cols=35 Identities=20% Similarity=0.093 Sum_probs=21.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++.|.|+|..| ..|.|||+
T Consensus 51 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 85 (169)
T 2y1l_E 51 LHLAAFNGHLEIVEVLLKNGADVNAVD-HAGMTPLR 85 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHH
Confidence 455666666666666666666666666 36666654
No 79
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=97.18 E-value=0.00017 Score=48.68 Aligned_cols=35 Identities=11% Similarity=0.020 Sum_probs=24.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|..|+++|.|+|..| ..|+|||+
T Consensus 63 L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 97 (285)
T 3d9h_A 63 MHEAAIHGHQLSLRNLISQGWAVNIIT-ADHVSPLH 97 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCEEC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHH
Confidence 566777777777777777777777766 46777765
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=97.18 E-value=0.00027 Score=46.45 Aligned_cols=35 Identities=17% Similarity=0.063 Sum_probs=26.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++.|.|+|..| ..|+|||+
T Consensus 74 L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~ 108 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFGVNVNAAD-SDGWTPLH 108 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHH
Confidence 556777778877777778888888777 47888875
No 81
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=97.17 E-value=0.00036 Score=44.40 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=23.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|++.|.|||..| ..|+|||+
T Consensus 154 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 188 (241)
T 1k1a_A 154 LIHAVENNSLSMVQLLLQHGANVNAQM-YSGSSALH 188 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCBC-TTSCBHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 455666677777777777777777666 46777764
No 82
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=97.17 E-value=0.00046 Score=46.60 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=29.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
+.-|+..++.+-|.-|+++|.|||..| ..|.|||++
T Consensus 226 L~~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~t~l~~ 261 (285)
T 3d9h_A 226 LHAVVRTASEELACLLMDFGADTQAKN-AEGKRPVEL 261 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCGGGG
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHH
Confidence 556788888888888888888888888 588888864
No 83
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=97.17 E-value=0.00024 Score=46.64 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=20.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|+|||+
T Consensus 161 L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpL~ 195 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNGANKDMQN-NREETPLF 195 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 344555566665555666666666555 35666654
No 84
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=97.16 E-value=0.00036 Score=44.41 Aligned_cols=35 Identities=14% Similarity=-0.005 Sum_probs=27.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|+|||+
T Consensus 44 L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 78 (231)
T 3aji_A 44 LHWACSAGHTEIVEFLLQLGVPVNDKD-DAGWSPLH 78 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCC-TTSCCHHH
T ss_pred HHHHHHcCcHHHHHHHHHhCCCCCCcC-CCCCCHHH
Confidence 566778888888888888888888777 47888875
No 85
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=97.15 E-value=0.00029 Score=46.47 Aligned_cols=36 Identities=14% Similarity=0.022 Sum_probs=32.9
Q ss_pred HHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCA---KGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~---kGlDPN~~d~~~GeTpL~L 70 (70)
+..|+..|+.+-|.-||+ .|.|||..| ..|+|||++
T Consensus 152 L~~A~~~g~~~~v~~Ll~~~~~gad~~~~d-~~g~tpLh~ 190 (273)
T 2pnn_A 152 LSLAACTNQLAIVKFLLQNSWQPADISARD-SVGNTVLHA 190 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccCCCCceeeC-CCCCcHHHH
Confidence 678999999999999999 999999999 599999973
No 86
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=97.13 E-value=0.00042 Score=44.55 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=26.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 43 L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 77 (285)
T 1wdy_A 43 LHNAVQMSREDIVELLLRHGADPVLRK-KNGATPFL 77 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHH
Confidence 567777888887877888888888777 47888775
No 87
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=97.13 E-value=0.00039 Score=44.39 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=21.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|+|..| ..|.|||+
T Consensus 48 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 82 (237)
T 3b7b_A 48 LMEAAENNHLEAVKYLIKAGALVDPKD-AEGSTCLH 82 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCCCCC-TTSCCHHH
T ss_pred HHHHHHhCCHHHHHHHHhCCCCCCCCC-CCCCcHHH
Confidence 555666666666666666666666655 35666654
No 88
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=97.12 E-value=0.0004 Score=43.58 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=21.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-|.-|++.|.|||..| ..|.|||+
T Consensus 72 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~ 106 (192)
T 2rfm_A 72 LIWAVKNNRLGIAEKLLSKGSNVNTKD-FSGKTPLM 106 (192)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHH
Confidence 455666666666666666666666665 36666654
No 89
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=97.12 E-value=0.00027 Score=46.00 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=32.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCC-------------CCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCP-------------ETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~-------------~~GeTpL~L 70 (70)
+..|+..|+.+-|.-|+++|.|||..|. ..|.|||++
T Consensus 97 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~ 146 (260)
T 3jxi_A 97 LHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSL 146 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHH
Confidence 7789999999999999999999999883 379999973
No 90
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=97.12 E-value=0.00044 Score=43.10 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=33.3
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCccccc
Q psy15934 32 KRFLEYVNNSQVEKIAKLCAKGL-DPNFHCPETGEMVAL 69 (70)
Q Consensus 32 ~df~~aV~~~~~~kV~kLL~kGl-DPN~~d~~~GeTpL~ 69 (70)
.-++.|+..|+.+.|..||.+|- |+|..| ..|+|||+
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~ 44 (201)
T 3hra_A 7 GALLEAANQRDTKKVKEILQDTTYQVDEVD-TEGNTPLN 44 (201)
T ss_dssp THHHHHHHTTCHHHHHHHHTCTTCCTTCCC-TTSCCHHH
T ss_pred cHHHHHHHhccHHHHHHHHHcCCCCCCCCC-CCCCCHHH
Confidence 35889999999999999998887 999999 59999996
No 91
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=97.11 E-value=0.00035 Score=44.47 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=17.1
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccc
Q psy15934 35 LEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVA 68 (70)
Q Consensus 35 ~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL 68 (70)
..|+..++.+-|.-|+++|.|||..| ..|.|||
T Consensus 177 ~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l 209 (231)
T 3aji_A 177 HLACDEERVEEAKFLVTQGASIYIEN-KEEKTPL 209 (231)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCC-TTSCCHH
T ss_pred HHHHHCCCHHHHHHHHHCCCCCCCCC-CCCCCHH
Confidence 34455555555555555555555554 3555554
No 92
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=97.10 E-value=0.00033 Score=45.65 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=32.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCC------------Cccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPET------------GEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~------------GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|+|..|... |.|||+
T Consensus 94 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~ 141 (256)
T 2etb_A 94 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLS 141 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHH
Confidence 788999999999999999999999998532 999996
No 93
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=97.10 E-value=0.00021 Score=48.99 Aligned_cols=35 Identities=9% Similarity=0.029 Sum_probs=23.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|+|||+
T Consensus 215 L~~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~tpL~ 249 (364)
T 3ljn_A 215 LHWAILINWEDVAMRFVEMGIDVNMED-NEHTVPLY 249 (364)
T ss_dssp THHHHTTTCHHHHHHHHTTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHH
Confidence 445666677766666677777777666 46777765
No 94
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=97.08 E-value=0.00052 Score=43.40 Aligned_cols=35 Identities=11% Similarity=-0.007 Sum_probs=19.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..++.+-+.-|+++|.|||..| ..|.|||+
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~ 145 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRIKD-KFNQIPLH 145 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCC-TTSCCHHH
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccccC-CCCCCHHH
Confidence 344555555555555555555555555 35555553
No 95
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=97.06 E-value=0.00036 Score=46.01 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=32.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCC-------------CCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPE-------------TGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~-------------~GeTpL~ 69 (70)
+..|+..|+.+-|.-||++|.|||..|.. .|+|||+
T Consensus 105 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~ 153 (273)
T 2pnn_A 105 LHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLS 153 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHH
Confidence 78899999999999999999999998842 6999996
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=97.05 E-value=0.00035 Score=48.65 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCC------CCCCCCcccccC
Q psy15934 32 KRFLEYVNNSQVEKIAKLCAKGLDPNF------HCPETGEMVALI 70 (70)
Q Consensus 32 ~df~~aV~~~~~~kV~kLL~kGlDPN~------~d~~~GeTpL~L 70 (70)
..++.||..|+.+.|..|++.|.|||. .| ..|+|||++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~-~~g~t~Lh~ 196 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQ-APEELVLHL 196 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSC-SCEECHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccC-CCCccHHHH
Confidence 459999999999999999999999998 46 699999963
No 97
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=97.03 E-value=0.00043 Score=46.02 Aligned_cols=35 Identities=17% Similarity=0.084 Sum_probs=32.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 115 L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t~l~ 149 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELGADIEVED-ERGLTALE 149 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHH
Confidence 678999999999999999999999999 69999986
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=97.02 E-value=0.00042 Score=48.24 Aligned_cols=35 Identities=14% Similarity=-0.102 Sum_probs=19.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-||+.|.|||..| ..|+|||+
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d-~~G~TpL~ 264 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVN-EAGETALD 264 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHH
Confidence 344555555555555556666666555 35666553
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=96.97 E-value=0.00048 Score=44.24 Aligned_cols=35 Identities=9% Similarity=0.139 Sum_probs=22.5
Q ss_pred HHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAK-GLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~k-GlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|++. |.|+|..| ..|+|||+
T Consensus 110 L~~A~~~~~~~~v~~Ll~~~g~~~~~~d-~~g~tpL~ 145 (222)
T 3ehr_A 110 LYWACHGGHKDIVEMLFTQPNIELNQQN-KLGDTALH 145 (222)
T ss_dssp HHHHHHTTCHHHHHHHTTSTTCCCCCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHcCCCCCccccC-CCCCCHHH
Confidence 4556666666666666666 66666666 46666664
No 100
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=96.87 E-value=0.00077 Score=47.16 Aligned_cols=35 Identities=14% Similarity=0.073 Sum_probs=22.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|..|+++|.|||..| ..|+|||+
T Consensus 18 L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~~~t~L~ 52 (437)
T 1n11_A 18 LHVASFMGHLPIVKNLLQRGASPNVSN-VKVETPLH 52 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCSS-SCCCCHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCCC-CCCCCHHH
Confidence 455666666666666666666666666 46666664
No 101
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=96.84 E-value=0.00075 Score=47.23 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=19.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|++.|+.+-|.-|++.|.|||..| ..|.|||.
T Consensus 348 L~~A~~~g~~~iv~~Ll~~ga~~~~~~-~~g~t~l~ 382 (437)
T 1n11_A 348 LHQAAQQGHTDIVTLLLKNGASPNEVS-SDGTTPLA 382 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCC-SSSCCHHH
T ss_pred HHHHHHCChHHHHHHHHHCcCCCCCCC-CCCCCHHH
Confidence 444555566655555556666666555 35666553
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=96.82 E-value=0.0008 Score=46.23 Aligned_cols=36 Identities=8% Similarity=0.029 Sum_probs=31.1
Q ss_pred HHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNN---SQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~---~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
+..|+.. ++.+-|.-|++.|.|+|..| ..|.|||++
T Consensus 173 Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d-~~g~TpLh~ 211 (278)
T 1dcq_A 173 LHLAVRSVDRTSLHIVDFLVQNSGNLDKQT-GKGSTALHY 211 (278)
T ss_dssp HHHHHHHCCTTTHHHHHHHHHHCSCTTCCC-TTCCCHHHH
T ss_pred chHHHHhcccchHHHHHHHHHCCCCccccC-CCCCCHHHH
Confidence 5567777 88999999999999999999 599999973
No 103
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=96.77 E-value=0.00081 Score=45.43 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=32.1
Q ss_pred HHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCA-KGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~-kGlDPN~~d~~~GeTpL~ 69 (70)
+.-|+..|+.+-|.-||+ .|.|||..| ..|+|||+
T Consensus 220 Lh~A~~~g~~~iv~~Ll~~~gad~~~~d-~~g~TpL~ 255 (276)
T 4hbd_A 220 LMCACEHGHKEIAGLLLAVPSCDISLTD-RDGSTALM 255 (276)
T ss_dssp HHHHHHHTCHHHHHHHHTSTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCCcCcC-CCCCCHHH
Confidence 677899999999999999 899999999 69999996
No 104
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=96.74 E-value=0.00062 Score=46.08 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=19.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 66 L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t~L~ 100 (285)
T 3kea_A 66 LHQAATLEDTKIVKILLFSGLDDSQFD-DKGNTALY 100 (285)
T ss_dssp HHHHTTSSSCHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCcHHH
Confidence 444555555555555555555555555 35555553
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=96.71 E-value=0.00069 Score=49.85 Aligned_cols=35 Identities=9% Similarity=0.074 Sum_probs=22.4
Q ss_pred HHHHHH---cCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVN---NSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~---~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..||. .|+.+-|.-||+.|.|+|..| ..|+|||+
T Consensus 175 Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d-~~g~TpLh 212 (497)
T 3lvq_E 175 LHLAVKVANQASLPLVDFIIQNGGHLDAKA-ADGNTALH 212 (497)
T ss_dssp HHHHHHTCCTTTHHHHHHHHHHSCCTTCCC-SSSCCHHH
T ss_pred HHHHHHhcccccHHHHHHHHHcCCCCCccC-CCCCcHHH
Confidence 555544 666666666666677766666 46666665
No 106
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=96.69 E-value=0.0011 Score=44.99 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=27.5
Q ss_pred HHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCA-KGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~-kGlDPN~~d~~~GeTpL~ 69 (70)
+..|++.++.+.|..|+. .|.|+|..| ..|.|||+
T Consensus 243 L~~a~~~~~~~~v~~Ll~~~~~~vn~~d-~~G~TpL~ 278 (337)
T 4g8k_A 243 LILAVEKKHLGLVQRLLEQEHIEINDTD-SDGKTALL 278 (337)
T ss_dssp HHHHHHTTCHHHHHHHHTSTTCCTTCBC-TTSCBHHH
T ss_pred HHHHHHhhhhHHHHHHHHhcCCcccCcC-CCCCCHHH
Confidence 566788888888888886 488888888 58888886
No 107
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=96.62 E-value=0.0012 Score=46.32 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=20.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+.-|+..|+.+-|.-|+++|.|+|..| ..|.|||+
T Consensus 317 L~~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~l~ 351 (373)
T 2fo1_E 317 IMLAAQEGRIEVVMYLIQQGASVEAVD-ATDHTARQ 351 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCCC-SSSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccCCC-CCCCCHHH
Confidence 444556666666666666666666665 35666654
No 108
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=96.52 E-value=0.0019 Score=42.01 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=26.3
Q ss_pred HHHHHHcCC------HHHHHHHHhcCCCCCCCCCCCCc-ccccC
Q psy15934 34 FLEYVNNSQ------VEKIAKLCAKGLDPNFHCPETGE-MVALI 70 (70)
Q Consensus 34 f~~aV~~~~------~~kV~kLL~kGlDPN~~d~~~Ge-TpL~L 70 (70)
+..|+..+. .+-|.-||++|.|+|..| ..|. |||++
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d-~~g~ttpLh~ 121 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKGADITALY-KPYKIVVFKN 121 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCB-GGGTBCTTGG
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCCCCCCccC-CCcCchHHHH
Confidence 344555554 455667889999999999 5899 99863
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=96.51 E-value=0.0017 Score=47.34 Aligned_cols=37 Identities=14% Similarity=0.181 Sum_probs=28.6
Q ss_pred HHHHHHHc-CCHHHHHHHHhcCCCCCCCCC-CCCccccc
Q psy15934 33 RFLEYVNN-SQVEKIAKLCAKGLDPNFHCP-ETGEMVAL 69 (70)
Q Consensus 33 df~~aV~~-~~~~kV~kLL~kGlDPN~~d~-~~GeTpL~ 69 (70)
-++.|+.. ++.+.|..||+.|.|+|..|. ..|.|||+
T Consensus 202 ~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh 240 (368)
T 3jue_A 202 LLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLI 240 (368)
T ss_dssp HHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHH
T ss_pred HHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHH
Confidence 36777777 888888888888888887763 47888875
No 110
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=96.42 E-value=0.0025 Score=44.64 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=31.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccccc
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVAL 69 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~ 69 (70)
+..|+..|+.+-|.-|+++|.|||..| ..|.|||+
T Consensus 170 L~~A~~~g~~~iv~~Ll~~ga~~~~~~-~~g~t~L~ 204 (373)
T 2fo1_E 170 LMLAVLARRRRLVAYLMKAGADPTIYN-KSERSALH 204 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCC-TTCCCHHH
T ss_pred HHHHHHcChHHHHHHHHHCCCCCcccC-CCCCCHHH
Confidence 678999999999999999999999988 59999986
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=96.37 E-value=0.0015 Score=47.51 Aligned_cols=36 Identities=11% Similarity=0.024 Sum_probs=33.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcccccC
Q psy15934 34 FLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMVALI 70 (70)
Q Consensus 34 f~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTpL~L 70 (70)
+..|+..|+.+-|.-||+.|.|+|..| ..|+|||++
T Consensus 239 Lh~Aa~~g~~~iv~~LL~~Gadvn~~d-~~G~TpLh~ 274 (368)
T 3jue_A 239 LIQATAANSLLACEFLLQNGANVNQAD-SAGRGPLHH 274 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCCC-CCCCCHHHH
Confidence 678999999999999999999999999 699999973
No 112
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=96.25 E-value=0.0012 Score=44.59 Aligned_cols=37 Identities=11% Similarity=-0.076 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCccc-cc
Q psy15934 32 KRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETGEMV-AL 69 (70)
Q Consensus 32 ~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~GeTp-L~ 69 (70)
--+..|+..|+.+-|.-|+++|.|||..| ..|.|| |+
T Consensus 163 t~L~~A~~~g~~~~v~~Ll~~gad~n~~~-~~g~t~~L~ 200 (285)
T 3kea_A 163 SCIHITIKNGHVDMMILLLDYMTSTNTNN-SLLFIPDIK 200 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCTTC-CCBCCTTHH
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCCccc-CCCCChHHH
Confidence 34678899999999999999999999998 589997 75
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=91.38 E-value=0.014 Score=42.51 Aligned_cols=36 Identities=11% Similarity=0.079 Sum_probs=27.6
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCC--CCCCCCccccc
Q psy15934 33 RFLEYVNNSQVEKIAKLCAKGLDPNF--HCPETGEMVAL 69 (70)
Q Consensus 33 df~~aV~~~~~~kV~kLL~kGlDPN~--~d~~~GeTpL~ 69 (70)
-+..|+..|+.+-|.-|+++|.|+|. .| ..|.|||+
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d-~~g~TpL~ 203 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEATAMIQ-AENYYAFR 203 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHHHHHH-HHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccchhccC-CCCCCHHH
Confidence 46778888888888888888888776 66 47888875
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=73.39 E-value=0.66 Score=33.56 Aligned_cols=36 Identities=6% Similarity=-0.119 Sum_probs=24.0
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCC---CCCCCCCccccc
Q psy15934 33 RFLEYVNNSQVEKIAKLCAKGLDPN---FHCPETGEMVAL 69 (70)
Q Consensus 33 df~~aV~~~~~~kV~kLL~kGlDPN---~~d~~~GeTpL~ 69 (70)
-+..|++.|+.+-|..|+++|.++. ..+ ..|+|||+
T Consensus 95 ~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~-~~~~tpL~ 133 (376)
T 2aja_A 95 ICFVAAITGCSSALDTLCLLLTSDEIVKVIQ-AENYQAFR 133 (376)
T ss_dssp HHHHHHHHCCHHHHHHHTTC--CCSSCC--C-HHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCcHHHHHHhc-cCCCCHHH
Confidence 3677888999999999999988432 223 36788875
No 115
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=68.50 E-value=4.9 Score=23.53 Aligned_cols=33 Identities=9% Similarity=0.149 Sum_probs=24.4
Q ss_pred ccCCCHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 14 LLNLDEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 14 ~~~l~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
|..++..++ ++-+++|++|+..+|.+.+..++.
T Consensus 2 m~~m~~~~~-----~~~~~~~~~a~n~~D~~~l~~l~a 34 (122)
T 3h3h_A 2 MEPITQAFA-----QQFSREWIDAWNAHDLDAILSHYA 34 (122)
T ss_dssp --CCCHHHH-----HHHHHHHHHHHHTTCHHHHHTTEE
T ss_pred CCcCCHHHH-----HHHHHHHHHHHhccCHHHHHHhcC
Confidence 345666554 455889999999999999888764
No 116
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=66.01 E-value=4.2 Score=24.35 Aligned_cols=25 Identities=20% Similarity=0.228 Sum_probs=21.8
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
++...+.|++|+..||.+.+..||.
T Consensus 8 ~~~~v~~f~~A~~~gD~~~l~~lla 32 (114)
T 3f40_A 8 TRDLVLEFIHALNTENFPAAKKRLN 32 (114)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcC
Confidence 4456899999999999999999984
No 117
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=63.24 E-value=9.2 Score=22.30 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=24.6
Q ss_pred HhhHhHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 25 LHTRSNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 25 lhtk~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
...++..+.|++|+..+|.+.+..++.-.
T Consensus 8 m~~~~~v~~~~~a~~~~D~~~~~~l~a~D 36 (140)
T 3i0y_A 8 QRATGLVQAYYEAFNRGDWDAMLAFLAED 36 (140)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEE
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHcCCc
Confidence 45677899999999999999999997543
No 118
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=59.87 E-value=5.8 Score=23.13 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=22.0
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
.++..++|++++..+|.+.+..++.-
T Consensus 7 ~~~~v~~~~~a~~~~d~~~~~~l~a~ 32 (135)
T 3fgy_A 7 NVQIVKDFFAAMGRGDKKGLLAVSAE 32 (135)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCC
Confidence 35678999999999999999988753
No 119
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=59.54 E-value=3.5 Score=25.08 Aligned_cols=28 Identities=7% Similarity=0.090 Sum_probs=24.3
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhcCC
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAKGL 54 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~kGl 54 (70)
.++.+++|++|+..+|.+.+..|+.-.+
T Consensus 7 ~~~~v~~~~~a~~~~D~~~l~~llaeD~ 34 (128)
T 3en8_A 7 IREALNAHWQASAAGDFDAEHDIYDDDA 34 (128)
T ss_dssp HHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCE
Confidence 4677999999999999999999986544
No 120
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=55.63 E-value=8.7 Score=23.95 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=24.1
Q ss_pred CHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 18 DEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 18 ~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
||.++.+| ++.|.+|+..+|.+.+..|+.-
T Consensus 15 de~aI~~l-----~~~~~~A~~~gD~~~l~al~a~ 44 (139)
T 3rob_A 15 DELAIRTV-----QYRWLEATRKFDRQVLSSLMTD 44 (139)
T ss_dssp HHHHHHHH-----HHHHHHHHHTTCHHHHHHTEEE
T ss_pred HHHHHHHH-----HHHHHHHHHcCCHHHHHHHccC
Confidence 45666554 6789999999999999999753
No 121
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=54.28 E-value=10 Score=23.15 Aligned_cols=25 Identities=4% Similarity=0.162 Sum_probs=21.8
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
++..++|++++..+|.+.+..|+.-
T Consensus 23 ~~~v~~~~~a~~~gD~~~l~~l~a~ 47 (148)
T 3g8z_A 23 IDIAKSYITAIQTGDHATLGSIISP 47 (148)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHEEE
T ss_pred HHHHHHHHHHHhcCCHHHHHHHcCC
Confidence 5568999999999999999999753
No 122
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=53.23 E-value=4.8 Score=26.51 Aligned_cols=26 Identities=23% Similarity=0.268 Sum_probs=22.4
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
+++.++.|++|+..||.+.+..|+.-
T Consensus 20 ~~~~v~~f~~A~~~gD~~aL~~LlA~ 45 (155)
T 3flj_A 20 MHPTIARMQEVVAKGDESLIHALLAE 45 (155)
T ss_dssp CCHHHHHHHHHHTTTCHHHHHTTEEE
T ss_pred HHHHHHHHHHHHHhCCHHHHHHhcCC
Confidence 35678999999999999999998753
No 123
>3jtz_A Integrase; four stranded beta-sheet, DNA binding protein; 1.30A {Yersinia pestis} PDB: 3rmp_A
Probab=53.05 E-value=6.2 Score=23.64 Aligned_cols=18 Identities=33% Similarity=0.396 Sum_probs=10.0
Q ss_pred CHHHHHHHHhcCCCCCCC
Q psy15934 42 QVEKIAKLCAKGLDPNFH 59 (70)
Q Consensus 42 ~~~kV~kLL~kGlDPN~~ 59 (70)
.++.+..+++.|.||.-|
T Consensus 67 ~a~~~r~~l~~Gidp~~~ 84 (88)
T 3jtz_A 67 QREGIRKMLALNINLEHH 84 (88)
T ss_dssp HHHHHHHHHTCC------
T ss_pred HHHHHHHHHHcCCCchhc
Confidence 456788999999999855
No 124
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=53.00 E-value=11 Score=22.63 Aligned_cols=25 Identities=12% Similarity=0.272 Sum_probs=21.8
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
.+...++|++++..+|.+.+..++.
T Consensus 17 ~~~~v~~f~~a~~~gD~~~l~~l~a 41 (149)
T 2bng_A 17 AIRAVEAFLNALQNEDFDTVDAALG 41 (149)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHcC
Confidence 3556899999999999999999975
No 125
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=51.73 E-value=13 Score=21.28 Aligned_cols=26 Identities=23% Similarity=0.506 Sum_probs=22.0
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
+...+.|++|+..+|.+.+..|+.-.
T Consensus 10 ~~~v~~~~~a~~~~D~~~l~~l~a~D 35 (131)
T 1oh0_A 10 QGLMARYIELVDVGDIEAIVQMYADD 35 (131)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 45688999999999999999997543
No 126
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=50.94 E-value=8.3 Score=22.73 Aligned_cols=24 Identities=4% Similarity=-0.093 Sum_probs=21.1
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
++..++|++++..+|.+.+..++.
T Consensus 15 ~~~v~~~~~a~~~gD~~~~~~l~a 38 (140)
T 3ec9_A 15 YQIVADHYAASDRHDPAAMMADIA 38 (140)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHhcC
Confidence 567899999999999999998874
No 127
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=50.32 E-value=13 Score=22.49 Aligned_cols=26 Identities=12% Similarity=0.259 Sum_probs=22.2
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
.++..+.|++|+..+|.+.+..++.-
T Consensus 31 ~~~~v~~~~~a~~~gD~~~l~~l~a~ 56 (156)
T 1tuh_A 31 NAETVRRGYAAFNSGDMKTLTELFDE 56 (156)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHhcCC
Confidence 35568999999999999999999754
No 128
>3r8n_T 30S ribosomal protein S20; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_T 3fih_T* 3j18_T* 2wwl_T 3oar_T 3oaq_T 3ofb_T 3ofa_T 3ofp_T 3ofx_T 3ofy_T 3ofo_T 3r8o_T 4a2i_T 4gd1_T 4gd2_T 2qal_T* 1p6g_T 1p87_T 2aw7_T ...
Probab=49.89 E-value=20 Score=21.85 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=19.5
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHH
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLC 50 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL 50 (70)
-|+..++|..||..||.+....++
T Consensus 26 ~rT~iKk~~~Ai~~gd~~~A~~~l 49 (85)
T 3r8n_T 26 MRTFIKKVYAAIEAGDKAAAQKAF 49 (85)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 467789999999999988776654
No 129
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=49.42 E-value=10 Score=21.83 Aligned_cols=24 Identities=8% Similarity=0.088 Sum_probs=20.7
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
++..++|++++..+|.+.+..++.
T Consensus 6 ~~~v~~~~~a~~~~d~~~~~~l~a 29 (132)
T 3ebt_A 6 MQTVRESYEAFHRRDLPGVLAALA 29 (132)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEE
T ss_pred HHHHHHHHHHHhccCHHHHHHhcC
Confidence 566899999999999999888764
No 130
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=49.07 E-value=5.7 Score=24.26 Aligned_cols=24 Identities=8% Similarity=0.185 Sum_probs=20.9
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
+..++.|++|+..||.+.+..|+.
T Consensus 15 ~~~~~~f~~A~~~gD~~~l~~lla 38 (134)
T 3dmc_A 15 HQGFEFFTQGLATGEWQKFLDMLT 38 (134)
T ss_dssp HHHHHHHHHHHHHSCCHHHHTTEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHcC
Confidence 456889999999999999998875
No 131
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=47.14 E-value=11 Score=23.80 Aligned_cols=24 Identities=17% Similarity=0.404 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 29 SNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 29 ~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
+-.+++++|+..||.+.+.+||.-
T Consensus 16 ~~~~~~~~Ai~~gD~~~~~~l~~~ 39 (143)
T 2f86_B 16 RVTQTLLDAISCKDFETYTRLCDT 39 (143)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHEEE
T ss_pred HHHHHHHHHHHccCHHHHHHhcCC
Confidence 347889999999999999999853
No 132
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=47.11 E-value=12 Score=23.03 Aligned_cols=27 Identities=7% Similarity=0.155 Sum_probs=22.4
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
.++-.++|++|+..+|.+.+..++.-.
T Consensus 22 ~~~lv~~~~~a~~~~D~~~l~~l~a~D 48 (151)
T 3f7x_A 22 ATELVNAYYAAFNAGDMPAFLALLSED 48 (151)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence 355689999999999999999987543
No 133
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=46.46 E-value=44 Score=19.75 Aligned_cols=40 Identities=10% Similarity=0.148 Sum_probs=28.2
Q ss_pred HHHHHHHhhHhH--HHHHHHHHH--cCCHHHHHHHHhcCCCCCC
Q psy15934 19 EKQLKALHTRSN--LKRFLEYVN--NSQVEKIAKLCAKGLDPNF 58 (70)
Q Consensus 19 ekql~klhtk~~--~~df~~aV~--~~~~~kV~kLL~kGlDPN~ 58 (70)
+.||+.|..=.- -+.-+.|.+ .||+++..++|-.|.||..
T Consensus 30 e~qi~qL~eMGF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~~~s 73 (74)
T 1vej_A 30 QQELEELKALGFANRDANLQALVATDGDIHAAIEMLLGASGPSS 73 (74)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHHHhCCCCCC
Confidence 557777766552 233345544 7999999999999999863
No 134
>3k7c_A Putative NTF2-like transpeptidase; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: PGE; 2.00A {Campylobacter jejuni}
Probab=45.60 E-value=14 Score=23.76 Aligned_cols=21 Identities=10% Similarity=0.183 Sum_probs=18.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHh
Q psy15934 31 LKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 31 ~~df~~aV~~~~~~kV~kLL~ 51 (70)
.+.|++++.+||.+++.+++.
T Consensus 13 ak~F~~~l~~GD~e~av~~i~ 33 (114)
T 3k7c_A 13 AKNFTKDLYSGDTKSVMSYID 33 (114)
T ss_dssp HHHHHHHHTTTCHHHHHHTBC
T ss_pred HHHHHHHHHcCCHHHHHhhcc
Confidence 467999999999999999975
No 135
>1wxp_A THO complex subunit 1; death domain, structural genomics, nuclear matrix, riken structural genomics/proteomics initiative, RSGI, transport protein; NMR {Homo sapiens}
Probab=45.58 E-value=48 Score=20.01 Aligned_cols=38 Identities=16% Similarity=0.298 Sum_probs=29.5
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAKGLDPNFHCPETG 64 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~kGlDPN~~d~~~G 64 (70)
..|.+..+++|...-+...|+.-|..=...|+-+|.+|
T Consensus 73 ~~AT~~~L~~AL~~~~~~dvae~l~~~~~~~~~~p~~~ 110 (110)
T 1wxp_A 73 VHATPENLINALNKSGLSDLAESLTNDNETNSSGPSSG 110 (110)
T ss_dssp GGCCHHHHHHHHHHTTCHHHHHHHHCCCSSCSCCCCCC
T ss_pred cCcHHHHHHHHHHHcCcHHHHHHHHHHhhccCCCCCCC
Confidence 45778888888887777778888877777787777665
No 136
>2vqe_T 30S ribosomal protein S20; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.7.6.1 PDB: 1gix_W* 1hnw_T* 1hnx_T* 1hnz_T* 1hr0_T 1j5e_T 1jgo_W* 1jgp_W* 1jgq_W* 1ml5_W* 1yl4_W 2b64_T* 2b9m_T* 2b9o_T* 2f4v_T* 2ow8_u* 2qnh_u* 2uxb_T* 1fjg_T* 2uxd_T* ...
Probab=45.42 E-value=27 Score=22.22 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=19.1
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHH
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLC 50 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL 50 (70)
-|+..++|.++|..||.+....++
T Consensus 33 ~rT~iKkv~~Ai~~gdk~~A~~~l 56 (106)
T 2vqe_T 33 IKTLSKKAVQLAQEGKAEEALKIM 56 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 467789999999999977766553
No 137
>2i1s_A Hypothetical protein; methanosarcina mazei,MAD, PSI-2,MCSG, structural genomics, protein structure initiative; 2.30A {Methanosarcina mazei} SCOP: d.343.1.1
Probab=44.62 E-value=17 Score=23.99 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHcCC---HHHHHHHHhcCCCCCCCCC
Q psy15934 29 SNLKRFLEYVNNSQ---VEKIAKLCAKGLDPNFHCP 61 (70)
Q Consensus 29 ~~~~df~~aV~~~~---~~kV~kLL~kGlDPN~~d~ 61 (70)
..|.+|++++..-+ .+.+..++..+|||+.-|.
T Consensus 148 ~gy~~~l~~~~dp~~~e~~~~~~W~g~~fdp~~fd~ 183 (188)
T 2i1s_A 148 WGYEEMLEVLKDSEHEEYEDTVLWLGDDFDPEYFDP 183 (188)
T ss_dssp HHHHHHHHHHTCTTSTTHHHHHHHHCTTCCTTCCCG
T ss_pred HHHHHHHhhhcCCCCccHHHHHHhhccCCCcccCCH
Confidence 46899999998654 3467778888999998774
No 138
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=44.17 E-value=11 Score=22.13 Aligned_cols=24 Identities=17% Similarity=0.259 Sum_probs=21.6
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
++-++.|+++...+|.+.+..|+.
T Consensus 20 ~~~v~~~~~a~~~~D~~~l~~l~a 43 (129)
T 3fh1_A 20 AEIMRRFNDVFQLHDPAALPELIA 43 (129)
T ss_dssp HHHHHHHHHHHHTTCGGGHHHHEE
T ss_pred HHHHHHHHHHHHccCHHHHHHhcC
Confidence 566899999999999999999985
No 139
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=43.88 E-value=13 Score=20.54 Aligned_cols=25 Identities=20% Similarity=0.417 Sum_probs=21.3
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
++..+.|++++..+|.+.+..++.-
T Consensus 8 ~~~v~~~~~a~~~~D~~~~~~l~a~ 32 (125)
T 1ohp_A 8 TAVVQRYVAALNAGDLDGIVALFAD 32 (125)
T ss_dssp HHHHHHHHHHHHHTCHHHHHTTEEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHHcCC
Confidence 5568999999999999999888753
No 140
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=42.96 E-value=17 Score=22.45 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=21.3
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
++.+++|++++..+|.+.+..|+.-
T Consensus 26 ~~~v~~~~~a~~~~D~~~l~~l~a~ 50 (163)
T 1z1s_A 26 KEILVHSLRLLENGDARGWCDLFHP 50 (163)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTEEE
T ss_pred HHHHHHHHHHHHCCCHHHHHHHCCC
Confidence 4458999999999999999999754
No 141
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=42.48 E-value=24 Score=20.08 Aligned_cols=25 Identities=8% Similarity=0.185 Sum_probs=21.3
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
++.++.|++|+..+|.+.+..|..-
T Consensus 14 ~~~~~~~~~a~~~~D~~~~~~l~a~ 38 (135)
T 3d9r_A 14 EAAAIAYLTAFNRADIPAVIATYTD 38 (135)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTEEE
T ss_pred HHHHHHHHHHHhcCCHHHHHHhcCC
Confidence 3458899999999999999999753
No 142
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=42.42 E-value=25 Score=20.33 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=24.2
Q ss_pred HHHhhHh--HHHHHHHHHHcCCHHHHHHHHhcCC
Q psy15934 23 KALHTRS--NLKRFLEYVNNSQVEKIAKLCAKGL 54 (70)
Q Consensus 23 ~klhtk~--~~~df~~aV~~~~~~kV~kLL~kGl 54 (70)
..|-+|+ .+..|.+|++.-+...++++|+.|.
T Consensus 60 d~l~~kG~~af~~F~~aL~~~~~~~La~~L~~~~ 93 (94)
T 2p1h_A 60 KMILKKDNDSYVSFYNALLHEGYKDLAALLHDGI 93 (94)
T ss_dssp HHHTTSCHHHHHHHHHHHHHTTCHHHHHHHGGGC
T ss_pred HHHHHcCHHHHHHHHHHHHHcCHHHHHHHHhccC
Confidence 3445565 6788999998877778999988765
No 143
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=41.83 E-value=37 Score=22.03 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=29.4
Q ss_pred HHHHHHhhHhHHHH-HHHHHHcCCHHHHHHHHhcCCCCCC
Q psy15934 20 KQLKALHTRSNLKR-FLEYVNNSQVEKIAKLCAKGLDPNF 58 (70)
Q Consensus 20 kql~klhtk~~~~d-f~~aV~~~~~~kV~kLL~kGlDPN~ 58 (70)
.+|..|=..+.|++ |..|.+.++.+-|..+|. -+||++
T Consensus 5 ~~I~~Ll~~g~~eeAf~~aL~ssd~~lv~~lc~-~~dp~~ 43 (139)
T 2vxg_A 5 DSIKQLLMAGQINKAFHQALLANDLGLVEFTLR-HTDSNQ 43 (139)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHH-HSCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHhCcHHHHHHHHH-cCCHHH
Confidence 35778888888888 889999999995555554 588885
No 144
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=41.68 E-value=12 Score=22.26 Aligned_cols=25 Identities=12% Similarity=0.300 Sum_probs=21.0
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
++..++|++|+..+|.+.+..++.-
T Consensus 25 ~~~v~~~~~a~~~~D~~~l~~l~a~ 49 (149)
T 1nww_A 25 EKIVLEFMDALTSNDAAKLIEYFAE 49 (149)
T ss_dssp HHHHHHHHHHGGGCCHHHHHTTBCS
T ss_pred HHHHHHHHHHHhcCCHHHHHHHhCC
Confidence 4568999999999999998888753
No 145
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=41.60 E-value=14 Score=21.62 Aligned_cols=26 Identities=15% Similarity=0.429 Sum_probs=22.0
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
.+...++|++++..+|.+.+..++.-
T Consensus 12 ~~~~v~~~~~a~~~~D~~~l~~l~a~ 37 (150)
T 1s5a_A 12 ACETLRKFMAYMLEKDMKSWTELWDE 37 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhCCC
Confidence 45668999999999999999988754
No 146
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=40.65 E-value=25 Score=22.91 Aligned_cols=34 Identities=9% Similarity=0.172 Sum_probs=26.8
Q ss_pred hccCCCHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 13 LLLNLDEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 13 ~~~~l~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
.++.++..+. ++-+++|++|...+|.+.+..++.
T Consensus 3 ~~~~Ms~~~~-----~~~v~ry~~A~n~gD~d~l~~l~a 36 (156)
T 3g16_A 3 TAPTLSRAAM-----EKVIRTYYDGCNEADEAKMIACFV 36 (156)
T ss_dssp CCCCCCHHHH-----HHHHHHHHHHHHTTCHHHHHTTEE
T ss_pred CcccccchhH-----HHHHHHHHHHHHcCCHHHHHHhcC
Confidence 3566676665 455999999999999999998863
No 147
>3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P*
Probab=40.16 E-value=13 Score=19.29 Aligned_cols=18 Identities=44% Similarity=0.530 Sum_probs=14.1
Q ss_pred CCHHHHHHHHhcCCCCCCCC
Q psy15934 41 SQVEKIAKLCAKGLDPNFHC 60 (70)
Q Consensus 41 ~~~~kV~kLL~kGlDPN~~d 60 (70)
|.+|.|.+| ||+|-|...
T Consensus 9 ghvESv~KL--KglDi~~i~ 26 (31)
T 3m50_P 9 GHVEAVVKL--KGLDIETIQ 26 (31)
T ss_dssp HHHHHHHHH--TTCCSCCCC
T ss_pred HHHHHHHHH--hcCChhhhh
Confidence 667788886 899998765
No 148
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=39.15 E-value=24 Score=21.91 Aligned_cols=27 Identities=19% Similarity=0.145 Sum_probs=22.2
Q ss_pred hhHhHHHHHHHHHHcCCH-HHHHHHHhc
Q psy15934 26 HTRSNLKRFLEYVNNSQV-EKIAKLCAK 52 (70)
Q Consensus 26 htk~~~~df~~aV~~~~~-~kV~kLL~k 52 (70)
.+|+..++|++++..++. +.+.+|+.-
T Consensus 21 ~~kevv~r~~e~~~~gd~~~~l~~lya~ 48 (136)
T 3hk4_A 21 TIAEIAKDFTELLKQGDNAGAAEKYNAD 48 (136)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHEEE
T ss_pred cHHHHHHHHHHHHHcCCcHHHHHHHCCC
Confidence 467889999999999997 567888753
No 149
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=37.99 E-value=17 Score=21.80 Aligned_cols=26 Identities=12% Similarity=0.066 Sum_probs=21.5
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
.++..++|++++..++.+.+.+++.-
T Consensus 6 ~~~~v~~~~~a~~~~d~~~~~~~~a~ 31 (152)
T 2gex_A 6 NKERCLEMVAAWNRWDVSGVVAHWAP 31 (152)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHcCC
Confidence 45678999999999999988887643
No 150
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=35.23 E-value=35 Score=20.22 Aligned_cols=23 Identities=13% Similarity=0.098 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 29 SNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 29 ~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
+-.+.|.+|+..+|++.+.+|+.
T Consensus 18 ~l~~~~~~A~~~~D~~~l~~L~~ 40 (134)
T 3fsd_A 18 FYEERLRAAMLTGDLKGLETLLA 40 (134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHEE
T ss_pred HHHHHHHHHHHhCCHHHHHhhcC
Confidence 34678999999999999999985
No 151
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=34.54 E-value=28 Score=20.24 Aligned_cols=26 Identities=15% Similarity=-0.010 Sum_probs=21.9
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
++..+.|++++..+|.+.+..+..-.
T Consensus 10 ~~~v~~~~~a~~~~D~~~~~~l~a~D 35 (139)
T 2a15_A 10 LIASQSSWRCVQAHDREGWLALMADD 35 (139)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTEEEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHhcCCC
Confidence 45578999999999999999997544
No 152
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=33.25 E-value=39 Score=18.88 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 30 NLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 30 ~~~df~~aV~~~~~~kV~kLL~k 52 (70)
-.+.|.+|+..+|++.+.+|+.-
T Consensus 11 l~~~~~~A~~~~D~~~l~~l~~~ 33 (123)
T 2r4i_A 11 CEKKLLTAIQNNDVESLEVLLHD 33 (123)
T ss_dssp HHHHHHHHHHHTCHHHHHHHEEE
T ss_pred HHHHHHHHHHhCCHHHHHhhhCc
Confidence 36789999999999999999753
No 153
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=33.08 E-value=17 Score=22.28 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=17.8
Q ss_pred cCCHHHHHHHHhcCCCCCCCC
Q psy15934 40 NSQVEKIAKLCAKGLDPNFHC 60 (70)
Q Consensus 40 ~~~~~kV~kLL~kGlDPN~~d 60 (70)
....+.|..+|++|-+|+.++
T Consensus 61 ~~~~d~II~eLe~g~~P~~VC 81 (87)
T 3s64_A 61 KIEMGAIKTLLENGSAPEEIC 81 (87)
T ss_dssp HHHHHHHHHHHHTTCCTTTHH
T ss_pred HHhHHHHHHHHHcCCCHHHHH
Confidence 456789999999999999765
No 154
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=33.06 E-value=24 Score=21.21 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 29 SNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 29 ~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
.-.++|++|+..+|.+.+..++.-
T Consensus 8 ~~v~~~~~a~~~gD~~~l~~l~a~ 31 (143)
T 3dm8_A 8 RFSRALHRALNDRQTEELATIIDD 31 (143)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHEEE
T ss_pred HHHHHHHHHHHCCCHHHHHHhcCC
Confidence 347889999999999999999753
No 155
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=32.53 E-value=41 Score=19.71 Aligned_cols=26 Identities=27% Similarity=0.525 Sum_probs=21.7
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
.+-.+.|.+|+..+|.+.+.+++.-.
T Consensus 16 ~~l~~~~~~A~~~~D~~~~~~l~a~d 41 (143)
T 2ux0_A 16 IKITEQLIEAINNGDFEAYTKICDPG 41 (143)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence 34578899999999999999998544
No 156
>2end_A Endonuclease V; 1.45A {Enterobacteria phage T4} SCOP: a.18.1.1 PDB: 1enj_A 1eni_A 1enk_A 2fcc_A* 1vas_A*
Probab=32.23 E-value=33 Score=23.00 Aligned_cols=24 Identities=25% Similarity=0.415 Sum_probs=19.1
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCC
Q psy15934 36 EYVNNSQVEKIAKLCAKGLDPNFH 59 (70)
Q Consensus 36 ~aV~~~~~~kV~kLL~kGlDPN~~ 59 (70)
.+......+=+.+|+.||+.||+.
T Consensus 65 ~~L~kRy~~L~~Em~~RGy~~~~~ 88 (138)
T 2end_A 65 EFLRKRQIELIAECLKRGFNIKDT 88 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCc
Confidence 455666677789999999999974
No 157
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=32.18 E-value=30 Score=19.80 Aligned_cols=26 Identities=15% Similarity=0.206 Sum_probs=21.7
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
++..+.|++|...+|.+.+..++.-.
T Consensus 6 ~~~v~~~~~a~n~~D~~~~~~~~a~D 31 (123)
T 2k54_A 6 ELPVQKQLEAYNARDIDAFMAWWADD 31 (123)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHhcCHHHHHhhcCCc
Confidence 45688999999999999998887543
No 158
>4adn_A FAR1; antibiotic resistance; 1.65A {Staphylococcus aureus} PDB: 4ado_A
Probab=30.34 E-value=23 Score=25.18 Aligned_cols=23 Identities=4% Similarity=0.059 Sum_probs=20.0
Q ss_pred hhhhhhhhccCCCHHHHHHHhhH
Q psy15934 6 IANTFISLLLNLDEKQLKALHTR 28 (70)
Q Consensus 6 ~~k~rvy~~~~l~ekql~klhtk 28 (70)
-+|..|+.+.+++|+|++++=-|
T Consensus 87 ~Lk~yV~pm~~lTe~qIrk~F~k 109 (222)
T 4adn_A 87 KFLEYVVPFELPSPQKLQKVFKK 109 (222)
T ss_dssp HHHTTBCCCCCCCHHHHHHHTTT
T ss_pred HHHHHHcCCCCCCHHHHHHHhhh
Confidence 47889999999999999988655
No 159
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=29.72 E-value=39 Score=18.88 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=20.9
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
++-.+.|.+|+..+|.+.+..|..-
T Consensus 9 ~~~~~~~~~a~~~~D~~~~~~l~a~ 33 (129)
T 3hx8_A 9 EAANADFVKAYNSKDAAGVASKYMD 33 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHhhCC
Confidence 3457889999999999999998754
No 160
>3d5l_A Regulatory protein RECX; PSI-II, NYSGXRC, DNA repair, 10123K, structural genomi protein structure initiative; 2.35A {Lactobacillus reuteri}
Probab=29.58 E-value=73 Score=21.42 Aligned_cols=54 Identities=22% Similarity=0.292 Sum_probs=35.5
Q ss_pred hhhhhhhhccCCCHHHHHHHhhHhHHHHH----HHHHH---cCCHHHHHHHHhcCCCCCCC
Q psy15934 6 IANTFISLLLNLDEKQLKALHTRSNLKRF----LEYVN---NSQVEKIAKLCAKGLDPNFH 59 (70)
Q Consensus 6 ~~k~rvy~~~~l~ekql~klhtk~~~~df----~~aV~---~~~~~kV~kLL~kGlDPN~~ 59 (70)
+.+-++++...||+.++..+-....+... +.++. ....+=-.+|..+|++|..+
T Consensus 35 l~~~~L~kg~el~~e~~~~i~~~~~~~~a~~~Al~~Ls~r~~S~~EL~~KL~~kg~~~e~i 95 (221)
T 3d5l_A 35 LIQFRLMKGTELDEKQIAAIATADQQAKAYSRMLDYLSYQMRTESDIVKKLKEIDTPEEFV 95 (221)
T ss_dssp HHHTTCCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCCHHHH
T ss_pred HHHcCCcCCCCCCHHHHHHHHHhHHHHHHHHHHHHHhccccccHHHHHHHHHhcCCCHHHH
Confidence 45667888889999999988765555553 33333 23344445678899987643
No 161
>1qg9_A Protein (sodium channel protein, brain II alpha subunit); transmembrane sodium channel, structure, transmembrane channel; NMR {Synthetic} SCOP: j.35.1.1
Probab=29.43 E-value=24 Score=17.31 Aligned_cols=12 Identities=25% Similarity=0.396 Sum_probs=7.8
Q ss_pred HHHHHHHHhcCC
Q psy15934 43 VEKIAKLCAKGL 54 (70)
Q Consensus 43 ~~kV~kLL~kGl 54 (70)
.|.+.|+++|||
T Consensus 12 fE~liKi~ArGf 23 (26)
T 1qg9_A 12 FESLIKILARXX 23 (26)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHHhhh
Confidence 356789999997
No 162
>3ju0_A Phage integrase; four stranded beta-sheet, DNA binding protein; 1.60A {Pectobacterium atrosepticum}
Probab=29.35 E-value=27 Score=21.58 Aligned_cols=16 Identities=38% Similarity=0.598 Sum_probs=13.4
Q ss_pred HHHHHHHHhcCCCCCC
Q psy15934 43 VEKIAKLCAKGLDPNF 58 (70)
Q Consensus 43 ~~kV~kLL~kGlDPN~ 58 (70)
...+..+++.|.||..
T Consensus 68 a~~~r~~l~~GiDP~~ 83 (108)
T 3ju0_A 68 RDEAKKLLAAGIDPSA 83 (108)
T ss_dssp HHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHcCCCHHH
Confidence 4678889999999975
No 163
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=29.30 E-value=58 Score=19.42 Aligned_cols=24 Identities=13% Similarity=0.112 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 29 SNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 29 ~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
+-++.|.+|+..+|.+.+..+...
T Consensus 34 ~~~~~~~~A~~~~D~~~l~~l~a~ 57 (148)
T 3bb9_A 34 NVVKQFHAALQMGNEAIVRQSLAA 57 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHEEE
T ss_pred HHHHHHHHHHHhCCHHHHHHhhCC
Confidence 347889999999999999999754
No 164
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=28.76 E-value=49 Score=20.31 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=26.1
Q ss_pred CCHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 17 LDEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 17 l~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
+.+.|... .++..++|+++...+|.+.+.+++.-
T Consensus 28 ~~~~~~~~--n~~~v~~~~~a~~~~d~~~l~~~~a~ 61 (159)
T 3k0z_A 28 LSQKEATE--MVHAAQRFYAFWDTGKEELIPQTVTE 61 (159)
T ss_dssp SCHHHHHH--HHHHHHHHHHHHHHCCGGGHHHHEEE
T ss_pred CChhhhHH--HHHHHHHHHHHHhcCCHHHHHHHcCC
Confidence 34444433 57778999999999999999999754
No 165
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=27.23 E-value=63 Score=19.86 Aligned_cols=25 Identities=8% Similarity=0.212 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 29 SNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 29 ~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
+..+.|.+|++.+|.+.+..+....
T Consensus 12 ~~~~af~~A~~~gD~da~~al~a~d 36 (144)
T 3gwr_A 12 AAEDAFYAAFEARSLDDMMAVWARD 36 (144)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHBCSS
T ss_pred HHHHHHHHHHHcCCHHHHHhhccCC
Confidence 3468899999999999999999876
No 166
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=26.95 E-value=11 Score=24.05 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=21.8
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
++..++.|++++..+|.+.+..|+.
T Consensus 22 ~~~~l~~f~~a~~~gD~~aL~~LlA 46 (148)
T 3f8x_A 22 VQSGLQEWHRIIAEADWERLPDLLA 46 (148)
T ss_dssp HHHHHHHHHHHHHHTCGGGSGGGEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhC
Confidence 4567999999999999999988875
No 167
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=26.83 E-value=21 Score=21.87 Aligned_cols=26 Identities=8% Similarity=0.294 Sum_probs=21.7
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
++.+++|++|...+|.+.+..++.-.
T Consensus 21 ~~~v~~~~~a~n~~D~~~l~~l~a~D 46 (150)
T 3f8h_A 21 NDTIARYFDAFNAGDTDGMLACLSED 46 (150)
T ss_dssp CCHHHHHHHHHHHTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHccCHHHHHHHcCCC
Confidence 45689999999999999998887543
No 168
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=26.68 E-value=27 Score=21.21 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=20.7
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
.++..++|++++..+|.+.+.+++.
T Consensus 6 ~~~~v~~~~~a~~~~D~~~~~~~~a 30 (158)
T 2gey_A 6 RKALCLEMVAAWNRWDLSGIIKHWS 30 (158)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHTTEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHcC
Confidence 3567899999999999988887764
No 169
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=26.31 E-value=32 Score=20.84 Aligned_cols=25 Identities=12% Similarity=0.118 Sum_probs=21.3
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
++.-.+.|++|...+|++.+..|+.
T Consensus 27 ~~eiv~~y~~A~n~~D~d~~~~l~a 51 (158)
T 4h3u_A 27 TPEIVTAWAAAWTGTNPNALGTLFA 51 (158)
T ss_dssp CCHHHHHHHHHHHSSCHHHHHTTEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhc
Confidence 4456889999999999999998874
No 170
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=26.14 E-value=48 Score=19.40 Aligned_cols=30 Identities=20% Similarity=0.446 Sum_probs=23.7
Q ss_pred CHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 18 DEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 18 ~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
+|.++.++ +++|.+|+..+|.+.+..+...
T Consensus 6 ~~~~I~~l-----~~~~~~A~~~~D~~~~~~l~a~ 35 (142)
T 3f7s_A 6 AESEIRQL-----IERWMQAVRDRDIPGIIAPYAD 35 (142)
T ss_dssp HHHHHHHH-----HHHHHHHHHTTCHHHHHTTEEE
T ss_pred hHHHHHHH-----HHHHHHHHHcCCHHHHHhhcCC
Confidence 45566444 7889999999999999988754
No 171
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=26.04 E-value=57 Score=21.50 Aligned_cols=24 Identities=13% Similarity=0.196 Sum_probs=19.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 30 NLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 30 ~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
.+..|.++|+.+|.+.+.++++++
T Consensus 251 ~l~~~~~~i~~~d~~~l~~~~~~~ 274 (281)
T 2g5c_A 251 SLNHLKELIVREAEEELVEYLKEV 274 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 346677789999999999998754
No 172
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=26.03 E-value=1.3e+02 Score=19.57 Aligned_cols=37 Identities=8% Similarity=0.170 Sum_probs=31.2
Q ss_pred CCCHHHHHHHhhHh-------HHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 16 NLDEKQLKALHTRS-------NLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 16 ~l~ekql~klhtk~-------~~~df~~aV~~~~~~kV~kLL~k 52 (70)
..+++++++|..-. .+++.+.+...++.+.+.++.+.
T Consensus 173 r~~~~~i~~l~~~~ww~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 216 (220)
T 4hur_A 173 RFSDGVIEEWLALQWWNLDMKIINENLPFIINGDIEMLKRKRKL 216 (220)
T ss_dssp SSCHHHHHHHHHHCGGGSCHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhhhcCCCHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 37889999988777 88899999999999998887654
No 173
>3c9p_A Uncharacterized protein SP1917; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 1.96A {Streptococcus pneumoniae}
Probab=25.69 E-value=55 Score=21.58 Aligned_cols=52 Identities=10% Similarity=0.068 Sum_probs=32.6
Q ss_pred chhhhhhhhhccC------CCHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHhcCCC
Q psy15934 4 SNIANTFISLLLN------LDEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCAKGLD 55 (70)
Q Consensus 4 ~~~~k~rvy~~~~------l~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~kGlD 55 (70)
||-.+.|||.|.- +=.|.-+|=.||+.++.-+.-..-=+.+.+..+++++.|
T Consensus 1 ~~~~~~ri~~msFasVYp~yv~KaEkKGRTk~Evd~vI~WLTGy~~~~l~~~i~~~~~ 58 (123)
T 3c9p_A 1 SNAMSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVT 58 (123)
T ss_dssp -CCCSGGGGGSBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCCCHHHHHHHTTSCCB
T ss_pred CcchhhhHHhchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCHHHHHHHHHcCCC
Confidence 4556667766632 223444555677777777777766677788888777643
No 174
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=25.58 E-value=13 Score=21.56 Aligned_cols=22 Identities=0% Similarity=-0.059 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHh
Q psy15934 30 NLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 30 ~~~df~~aV~~~~~~kV~kLL~ 51 (70)
..++|++|...+|.+.+..++.
T Consensus 5 ~v~~~~~a~~~gD~~~~~~~la 26 (112)
T 3f14_A 5 THYSIAQHFSSGDFPAVYACFN 26 (112)
T ss_dssp HHHHHHHHHHTTCGGGTGGGEE
T ss_pred HHHHHHHHHHcCCHHHHHHhcC
Confidence 4789999999999998888765
No 175
>1ej5_A WAsp, wiskott-aldrich syndrome protein; alpha helix, beta-hairpin turn, blood clotting; NMR {Homo sapiens} SCOP: a.68.1.1 PDB: 1t84_A* 2k42_A
Probab=24.57 E-value=1.3e+02 Score=18.74 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=33.3
Q ss_pred hhhhhccCCCHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy15934 9 TFISLLLNLDEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCAKGLDPN 57 (70)
Q Consensus 9 ~rvy~~~~l~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~kGlDPN 57 (70)
++++...+++++++++=-|+.-+.+|++ +.+-.+.|.+-..+=..|.
T Consensus 27 k~LL~~aGITe~elkdn~t~~fI~dfie--~~~gle~v~~e~~~~~~~~ 73 (107)
T 1ej5_A 27 RSLFSRAGISEAQLTDAETSKLIYDFIE--DQGGLEAVRQEMRRQGGSG 73 (107)
T ss_dssp HHHHHHTTCCHHHHSCHHHHHHHHHHHH--HTTHHHHHHHHHHHTTTSS
T ss_pred HHHHHHcCCCHHHHHcCHHHHHHHHHHH--HccccchhhHhhhhccCCC
Confidence 4677788999999987666677777766 3556777777775544444
No 176
>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}
Probab=24.55 E-value=8.3 Score=26.10 Aligned_cols=10 Identities=30% Similarity=0.823 Sum_probs=7.7
Q ss_pred cCCCCCCCCC
Q psy15934 52 KGLDPNFHCP 61 (70)
Q Consensus 52 kGlDPN~~d~ 61 (70)
.-||||+|..
T Consensus 124 e~FDP~~HeA 133 (177)
T 3a6m_A 124 EAFDPRYHEA 133 (177)
T ss_dssp SBCCTTTEEE
T ss_pred CCCCHHHhhh
Confidence 3499999964
No 177
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=24.25 E-value=43 Score=19.06 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=19.9
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
++-.++|+++...+|.+.+..++.
T Consensus 5 ~~~v~~~~~a~n~~D~~~~~~~~a 28 (117)
T 3ff2_A 5 LETAKAMIAAYNAQDVDTYVSYMT 28 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEE
T ss_pred HHHHHHHHHHHcccCHHHHHHhcC
Confidence 345889999999999999887764
No 178
>3cqc_A Nuclear pore complex protein NUP107; nucleoporin, mRNA transport, nucleus, phosphoprotein, protein transport, translocation, polymorphism; 2.53A {Homo sapiens} PDB: 3i4r_A 3cqg_A
Probab=23.73 E-value=36 Score=24.07 Aligned_cols=27 Identities=26% Similarity=0.527 Sum_probs=19.9
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCAKGLDPN 57 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~kGlDPN 57 (70)
+|+-++.|+++|.. .-..|+++|.||=
T Consensus 238 ~k~rL~Ell~~ia~----sSl~ll~~~~dp~ 264 (270)
T 3cqc_A 238 SKEELRKLLQKLRE----SSLMLLDQGLDPL 264 (270)
T ss_dssp CHHHHHHHHHHHHH----HHHHHHTTTBCTT
T ss_pred hHHHHHHHHHHHHH----HHHHHHhCCCCCc
Confidence 44577888888864 4456789999994
No 179
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=23.68 E-value=36 Score=19.67 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=24.5
Q ss_pred hhhhhccCCCHHHHHHHhhHhHHHHHHHHHHcCCHHHH
Q psy15934 9 TFISLLLNLDEKQLKALHTRSNLKRFLEYVNNSQVEKI 46 (70)
Q Consensus 9 ~rvy~~~~l~ekql~klhtk~~~~df~~aV~~~~~~kV 46 (70)
+++++..+++++|++.=-|...+-+|++ ++|-.+.|
T Consensus 28 ~~ll~~sGIs~~~~k~~et~~~I~~F~~--~~gG~eav 63 (65)
T 2lnh_A 28 KNLFDMCGISEAQLKDRETSKVIYDFIE--KTGGVEAV 63 (65)
T ss_dssp HHHHHHHTCCHHHHTCTTTHHHHHHHHH--HHCCHHHH
T ss_pred HHHHHHcCCCHHHHHCHHHHHHHHHHHH--HcCCcccc
Confidence 4667788999999976666667777765 33444443
No 180
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=23.41 E-value=13 Score=23.01 Aligned_cols=25 Identities=8% Similarity=0.251 Sum_probs=21.7
Q ss_pred hHhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 27 TRSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 27 tk~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
++..++.|++++..+|.+.+..|+.
T Consensus 11 ~~~~~~~~~~a~~~~D~~~l~~l~a 35 (143)
T 3mso_A 11 AAATLAEWHGLIARRDLSGLPRLLH 35 (143)
T ss_dssp HHHHHHHHHHHHHTTCCTTGGGGEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcC
Confidence 4667899999999999999988875
No 181
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=22.75 E-value=72 Score=21.12 Aligned_cols=24 Identities=8% Similarity=0.138 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 30 NLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 30 ~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
.+.+|.+++..+|.+.+.++++++
T Consensus 259 ~l~~~~~~l~~~d~~~l~~~~~~~ 282 (290)
T 3b1f_A 259 RLDEVSNLIKARDENAIWAFFNQS 282 (290)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 456788889999999999998764
No 182
>3pys_P 30S ribosomal protein S16; ribosome, IGR, IRES, PSIV, CRPV; 3.40A {Thermus thermophilus} PDB: 1pnx_P 1voq_P 1vos_P 1vov_P 1vox_P 1voz_P 1pns_P 3ms0_P 3mr8_P 3pyq_P 3pyn_P 3pyu_P 3fic_P* 1emw_A 1fjg_P* 1hnw_P* 1hnx_P* 1hnz_P* 1hr0_P 1i94_P* ...
Probab=22.73 E-value=48 Score=20.09 Aligned_cols=17 Identities=24% Similarity=0.349 Sum_probs=15.3
Q ss_pred CCHHHHHHHHhcCCCCC
Q psy15934 41 SQVEKIAKLCAKGLDPN 57 (70)
Q Consensus 41 ~~~~kV~kLL~kGlDPN 57 (70)
=|.+++..+|.+|.-|.
T Consensus 51 l~~eri~~Wl~~GAqpt 67 (83)
T 3pys_P 51 VDVERARYWLSVGAQPT 67 (83)
T ss_dssp CCHHHHHHHHHTCCCBC
T ss_pred EchHHHHHHHHCCCcCC
Confidence 47899999999999996
No 183
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=22.22 E-value=1.1e+02 Score=17.79 Aligned_cols=25 Identities=12% Similarity=0.227 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 29 SNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 29 ~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
+.+.++.+|+..+|++.+.++....
T Consensus 18 ~~~~~y~~A~~~~D~~~l~~lf~~d 42 (129)
T 2rcd_A 18 AAFYRYEKALTGNDVAVLDELFWHD 42 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHBCCS
T ss_pred HHHHHHHHHHhcCCHHHHHHhccCC
Confidence 4477788999999999998887654
No 184
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=21.66 E-value=64 Score=21.43 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=21.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 30 NLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 30 ~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
.|..+.+||+.||..+..+.+++.
T Consensus 82 ~y~~L~~Avr~Gdl~~f~~~l~~~ 105 (203)
T 3t5x_A 82 QFAEVTRAVSEGNLLLLHEALAKH 105 (203)
T ss_dssp GGHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 588999999999999999988764
No 185
>1r71_A Transcriptional repressor protein KORB; INCP, plasmid partitioning, protein-DNA complex, heilx-turn- helix motif, transcription factor; HET: BRU; 2.20A {Escherichia coli} SCOP: a.4.14.1
Probab=21.58 E-value=49 Score=22.03 Aligned_cols=46 Identities=15% Similarity=0.213 Sum_probs=18.3
Q ss_pred HHHHHh--hHhHHHHHHHHHHc----CCHHHHHHHHhcC-CCCCCCCCCCCcc
Q psy15934 21 QLKALH--TRSNLKRFLEYVNN----SQVEKIAKLCAKG-LDPNFHCPETGEM 66 (70)
Q Consensus 21 ql~klh--tk~~~~df~~aV~~----~~~~kV~kLL~kG-lDPN~~d~~~GeT 66 (70)
+|..++ .......++..+.. .++..+.+++..+ .+|++.++-+|.+
T Consensus 99 ~L~~l~k~~~~q~q~~l~~~~~~l~~~sVr~~r~~l~~~~~~~~~~~~~~g~~ 151 (178)
T 1r71_A 99 ELVTAFKKRPEEVEAWLDDDTQEITRGTVKLLREFLDEKGRDPNTVDAFNGQT 151 (178)
T ss_dssp HHHHHHHHCHHHHHHHHHCTTCCCSHHHHHHHHHHHHC---------------
T ss_pred HHHHhhcCCHHHHHHHHHHHHHhhccccHHHHHHHHHhccCCCcccccccCCc
Confidence 455553 11223556665542 4678888888765 4899888777765
No 186
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=21.58 E-value=28 Score=17.05 Aligned_cols=15 Identities=47% Similarity=0.682 Sum_probs=11.1
Q ss_pred HHHHHHHHhcCCCCC
Q psy15934 43 VEKIAKLCAKGLDPN 57 (70)
Q Consensus 43 ~~kV~kLL~kGlDPN 57 (70)
.++|.+|++-||+++
T Consensus 5 ~~~i~~L~~mGf~~~ 19 (40)
T 1z96_A 5 NSKIAQLVSMGFDPL 19 (40)
T ss_dssp HHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHcCCCHH
Confidence 357888888898764
No 187
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=21.48 E-value=19 Score=20.94 Aligned_cols=24 Identities=8% Similarity=0.295 Sum_probs=19.4
Q ss_pred HhHHHHHHHHHHcCCHHHHHHHHh
Q psy15934 28 RSNLKRFLEYVNNSQVEKIAKLCA 51 (70)
Q Consensus 28 k~~~~df~~aV~~~~~~kV~kLL~ 51 (70)
|+.+++|+++...++.+.+.+++.
T Consensus 6 ~~~v~~~~~~~~~~d~~~~~~~~a 29 (128)
T 3ehc_A 6 NDIYLAYLDSLNHQAFDELGTFVD 29 (128)
T ss_dssp HHHHHHHHHHHHTTCGGGGGGTEE
T ss_pred HHHHHHHHHHHhcCCHHHHHHhcC
Confidence 567899999999999987766653
No 188
>3sxm_A Transcriptional regulator, GNTR family; transcription factor, metal-binding, structur genomics, PSI-2, protein structure initiative; 1.55A {Thermotoga maritima} PDB: 3sxk_A 3sxz_A
Probab=21.30 E-value=87 Score=18.15 Aligned_cols=23 Identities=13% Similarity=0.137 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 30 NLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 30 ~~~df~~aV~~~~~~kV~kLL~k 52 (70)
.-+..++||..||.+...+++..
T Consensus 102 eH~~I~~Ai~~~D~~~A~~~~~~ 124 (140)
T 3sxm_A 102 EHKELIERIISGDKEGAIEKLKE 124 (140)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHH
Confidence 35679999999999999888653
No 189
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=21.29 E-value=60 Score=19.53 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=25.3
Q ss_pred CCCHHHHHHHhhHhHHHHHHHHHHcCCHHHHHHHHhc
Q psy15934 16 NLDEKQLKALHTRSNLKRFLEYVNNSQVEKIAKLCAK 52 (70)
Q Consensus 16 ~l~ekql~klhtk~~~~df~~aV~~~~~~kV~kLL~k 52 (70)
..|+.++.. -+++|.+|+..+|.+.+..+...
T Consensus 16 ~~d~~~I~~-----~~~~~~~A~~~~D~~~l~~l~a~ 47 (156)
T 3h51_A 16 DGEAREVAA-----LFDTWNAALATGNPHKVADLYAP 47 (156)
T ss_dssp SSHHHHHHH-----HHHHHHHHHHHTCHHHHHTTEEE
T ss_pred CCCHHHHHH-----HHHHHHHHHHcCCHHHHHhhcCC
Confidence 456777744 47889999999999999988653
No 190
>3c8l_A FTSZ-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.22A {Nostoc punctiforme}
Probab=21.17 E-value=34 Score=22.32 Aligned_cols=30 Identities=17% Similarity=0.298 Sum_probs=24.7
Q ss_pred hhHhHHHHHHHHHHcCCHHHHHHHHhcCC-CCC
Q psy15934 26 HTRSNLKRFLEYVNNSQVEKIAKLCAKGL-DPN 57 (70)
Q Consensus 26 htk~~~~df~~aV~~~~~~kV~kLL~kGl-DPN 57 (70)
-|||..+---+||.++....+.+++ |+ |||
T Consensus 22 ~TkAA~RAvrDAI~~nslp~~~~~~--g~~~~~ 52 (122)
T 3c8l_A 22 PTIAASRAVRNAIAHNALPGVWEVA--GLSHPN 52 (122)
T ss_dssp HHHHHHHHHHHHHTTCCCSSHHHHH--TCSSGG
T ss_pred HHHHHHHHHHHHHhhhcchhHHHHC--CCCChh
Confidence 3889999999999999998888887 66 554
No 191
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=20.81 E-value=77 Score=23.21 Aligned_cols=31 Identities=6% Similarity=0.069 Sum_probs=28.9
Q ss_pred HhhHhHHHHHHHHHHcCCHHHHHHHHhcCCC
Q psy15934 25 LHTRSNLKRFLEYVNNSQVEKIAKLCAKGLD 55 (70)
Q Consensus 25 lhtk~~~~df~~aV~~~~~~kV~kLL~kGlD 55 (70)
-|.++.|+.|++.--.++.+++..+.+|++.
T Consensus 12 ~~aR~vyer~l~~~P~~~~e~~~~iferal~ 42 (493)
T 2uy1_A 12 SSPSAIMEHARRLYMSKDYRSLESLFGRCLK 42 (493)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc
Confidence 4789999999999999999999999999998
No 192
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=20.72 E-value=46 Score=16.94 Aligned_cols=12 Identities=42% Similarity=0.592 Sum_probs=7.6
Q ss_pred cCCCHHHHHHHh
Q psy15934 15 LNLDEKQLKALH 26 (70)
Q Consensus 15 ~~l~ekql~klh 26 (70)
...||||+..|-
T Consensus 7 trfdekqieell 18 (31)
T 4h62_V 7 TRFDEKQIEELL 18 (31)
T ss_dssp ---CHHHHHHHH
T ss_pred ccccHHHHHHHH
Confidence 357999998874
No 193
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=20.19 E-value=56 Score=22.77 Aligned_cols=25 Identities=12% Similarity=0.190 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHhcC
Q psy15934 29 SNLKRFLEYVNNSQVEKIAKLCAKG 53 (70)
Q Consensus 29 ~~~~df~~aV~~~~~~kV~kLL~kG 53 (70)
..+.++.++++.+|.+.+.++++++
T Consensus 282 ~~l~~l~~~l~~~d~~~l~~~~~~a 306 (314)
T 3ggo_A 282 KSLNHLKELIVREAEEELVEYLKEV 306 (314)
T ss_dssp HHHHHHHHHHHHTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5677888999999999999988654
Done!