Query psy15935
Match_columns 202
No_of_seqs 188 out of 1909
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 16:51:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15935.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15935hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1l9x_A Gamma-glutamyl hydrolas 100.0 1.6E-44 5.4E-49 305.5 14.2 194 4-202 121-315 (315)
2 1qdl_B Protein (anthranilate s 99.9 9.5E-24 3.2E-28 166.6 10.3 106 6-133 76-183 (195)
3 1i1q_B Anthranilate synthase c 99.9 1.4E-22 4.7E-27 159.5 10.5 103 6-133 75-177 (192)
4 2a9v_A GMP synthase; structura 99.9 2.1E-22 7.3E-27 160.9 11.4 101 6-130 84-184 (212)
5 2vpi_A GMP synthase; guanine m 99.9 1.5E-22 5.1E-27 162.6 10.2 101 6-131 95-195 (218)
6 1wl8_A GMP synthase [glutamine 99.9 2.8E-22 9.7E-27 157.2 8.8 103 6-132 71-173 (189)
7 3fij_A LIN1909 protein; 11172J 99.9 4.3E-21 1.5E-25 157.3 13.4 122 6-163 107-243 (254)
8 3tqi_A GMP synthase [glutamine 99.8 1.3E-21 4.6E-26 175.3 9.4 131 6-166 81-211 (527)
9 1gpm_A GMP synthetase, XMP ami 99.8 9.5E-22 3.3E-26 176.2 8.3 129 6-164 78-206 (525)
10 2ywb_A GMP synthase [glutamine 99.8 3.1E-21 1E-25 172.2 10.7 120 6-165 70-189 (503)
11 1a9x_B Carbamoyl phosphate syn 99.8 1E-20 3.5E-25 162.7 11.6 116 6-162 260-375 (379)
12 3uow_A GMP synthetase; structu 99.8 5.7E-21 1.9E-25 172.1 9.5 123 6-163 82-233 (556)
13 3l7n_A Putative uncharacterize 99.8 5.3E-21 1.8E-25 155.1 5.7 101 6-129 83-183 (236)
14 2w7t_A CTP synthetase, putativ 99.8 1.1E-20 3.6E-25 156.6 6.7 136 6-169 95-263 (273)
15 3m3p_A Glutamine amido transfe 99.8 4.8E-21 1.6E-25 156.7 4.4 100 7-130 82-181 (250)
16 1o1y_A Conserved hypothetical 99.8 2.3E-20 7.9E-25 151.7 7.8 98 6-129 92-189 (239)
17 2vxo_A GMP synthase [glutamine 99.8 3.8E-20 1.3E-24 170.2 9.3 119 6-163 100-218 (697)
18 4gud_A Imidazole glycerol phos 99.8 1.1E-19 3.6E-24 144.6 9.2 101 6-129 71-189 (211)
19 2v4u_A CTP synthase 2; pyrimid 99.8 3.3E-20 1.1E-24 154.8 5.5 135 6-168 118-282 (289)
20 2ywj_A Glutamine amidotransfer 99.7 1.8E-18 6.2E-23 135.0 6.5 110 6-162 67-185 (186)
21 3r75_A Anthranilate/para-amino 99.7 2.2E-18 7.5E-23 157.3 6.5 102 6-133 520-621 (645)
22 3d54_D Phosphoribosylformylgly 99.7 2.9E-17 1E-21 130.4 10.5 111 6-133 78-194 (213)
23 1gpw_B Amidotransferase HISH; 99.7 7E-18 2.4E-22 133.2 6.7 102 6-129 76-182 (201)
24 1vco_A CTP synthetase; tetrame 99.7 6.1E-17 2.1E-21 144.9 7.6 141 6-163 383-546 (550)
25 1s1m_A CTP synthase; CTP synth 99.7 2.1E-17 7.1E-22 147.7 4.0 137 6-162 371-538 (545)
26 3nva_A CTP synthase; rossman f 99.6 5.1E-17 1.7E-21 143.6 3.5 135 6-162 378-534 (535)
27 2ywd_A Glutamine amidotransfer 99.6 9.9E-17 3.4E-21 125.4 4.5 93 8-129 75-176 (191)
28 2nv0_A Glutamine amidotransfer 99.6 5.9E-16 2E-20 121.6 8.4 96 6-129 71-174 (196)
29 1ka9_H Imidazole glycerol phos 99.6 3.3E-16 1.1E-20 123.6 6.3 97 6-130 74-183 (200)
30 1q7r_A Predicted amidotransfer 99.6 4.6E-16 1.6E-20 124.6 4.4 96 6-129 93-196 (219)
31 2abw_A PDX2 protein, glutamina 99.6 2.6E-15 8.9E-20 120.6 7.0 105 7-129 80-200 (227)
32 1jvn_A Glutamine, bifunctional 99.6 1.5E-15 5.3E-20 136.8 5.5 102 6-129 78-200 (555)
33 2iss_D Glutamine amidotransfer 99.6 3.8E-15 1.3E-19 118.3 6.3 98 6-130 90-195 (208)
34 2h2w_A Homoserine O-succinyltr 99.5 1.7E-14 5.9E-19 120.9 5.4 106 6-131 146-252 (312)
35 2vdj_A Homoserine O-succinyltr 99.5 1.8E-14 6E-19 120.4 4.9 107 6-131 134-241 (301)
36 3ugj_A Phosphoribosylformylgly 98.3 3E-06 1E-10 82.5 11.2 26 109-134 1252-1277(1303)
37 1fy2_A Aspartyl dipeptidase; s 92.4 0.044 1.5E-06 43.4 1.5 17 7-23 113-129 (229)
38 3l4e_A Uncharacterized peptida 91.6 0.05 1.7E-06 42.4 1.0 17 7-23 113-129 (206)
39 1oi4_A Hypothetical protein YH 80.5 0.71 2.4E-05 35.0 1.9 18 6-23 117-134 (193)
40 1ehs_A STB, heat-stable entero 72.7 0.74 2.5E-05 25.9 0.0 13 11-23 33-45 (48)
41 3l18_A Intracellular protease 61.1 3.9 0.00013 29.8 2.0 18 6-23 94-111 (168)
42 3cne_A Putative protease I; st 53.2 6.9 0.00024 28.6 2.2 18 6-23 103-120 (175)
43 2fex_A Conserved hypothetical 45.7 11 0.00039 27.8 2.4 18 6-23 93-110 (188)
44 2rk3_A Protein DJ-1; parkinson 45.3 9.4 0.00032 28.6 1.9 18 6-23 98-115 (197)
45 1vhq_A Enhancing lycopene bios 45.1 7.1 0.00024 30.2 1.2 22 6-28 132-154 (232)
46 2vrn_A Protease I, DR1199; cys 44.0 6.8 0.00023 29.0 0.9 18 6-23 107-124 (190)
47 2ab0_A YAJL; DJ-1/THIJ superfa 37.1 14 0.00049 27.8 1.7 18 6-23 98-116 (205)
48 4e08_A DJ-1 beta; flavodoxin-l 34.3 18 0.00061 26.8 1.9 18 6-23 99-116 (190)
49 3f5d_A Protein YDEA; unknow pr 32.9 25 0.00085 26.7 2.5 18 6-23 92-109 (206)
50 4hcj_A THIJ/PFPI domain protei 32.7 22 0.00077 26.3 2.2 18 6-23 100-117 (177)
51 3l3b_A ES1 family protein; ssg 30.1 26 0.00089 27.4 2.2 18 6-23 150-167 (242)
52 3efe_A THIJ/PFPI family protei 23.3 43 0.0015 25.3 2.3 18 6-23 104-121 (212)
53 3er6_A Putative transcriptiona 22.4 43 0.0015 25.2 2.1 18 6-23 107-124 (209)
54 1u9c_A APC35852; structural ge 22.4 20 0.00068 27.2 0.2 18 6-23 121-138 (224)
55 3uk7_A Class I glutamine amido 20.3 51 0.0017 27.4 2.4 18 6-23 313-330 (396)
No 1
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=100.00 E-value=1.6e-44 Score=305.45 Aligned_cols=194 Identities=34% Similarity=0.667 Sum_probs=164.8
Q ss_pred CCCcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeec
Q psy15935 4 RGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRA 83 (202)
Q Consensus 4 ~g~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~ 83 (202)
+|+++||||||+|||+|+.+ +||++.+...+.++...|++.+.....++||+.++..+.+.+.+...++++|+++|.++
T Consensus 121 ~g~~~PiLGIC~G~Qll~~a-~GG~~~~~~~~~~g~~~p~~~~~~~~~s~L~~~~~~~~~~~l~~~~~~~~~H~~~V~~~ 199 (315)
T 1l9x_A 121 DGDYFPVWGTCLGFEELSLL-ISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVK 199 (315)
T ss_dssp TTCCCCEEEETHHHHHHHHH-HHSSCCCEEEEEEEEEECCEECSTTTTCSTTTTSCHHHHHHHHHSCCEEEEEEEECBHH
T ss_pred cCCCceEEEEChHHHHHHHH-hCCccccccccccCCCCCeeeccCCCCChHHHhcChhhhhhccccceEEEhhhhhcCcc
Confidence 45579999999999999999 99987665544455556777765556889999999888777777777788999999876
Q ss_pred ccccc-cCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy15935 84 TMNST-KLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASK 162 (202)
Q Consensus 84 ~~~~~-~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~ar~ 162 (202)
.+.++ .|+++++++|++ +++..++|++++++++|++|||||||+..++|+....++|+.++++.++.+.+.|+++||+
T Consensus 200 ~~~~~~~l~~g~~v~A~s-~dg~ve~i~~i~~~~~~i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~ 278 (315)
T 1l9x_A 200 NFTMNEKLKKFFNVLTTN-TDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARK 278 (315)
T ss_dssp HHHTCHHHHHHEEEEEEE-ESSSCEEEEEEEESSSCEEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCEEEEEc-CCCCEEEEEEeccCCCCEEEEEeCCCCCcccccccccCCccHHHHHHHHHHHHHHHHHHHh
Confidence 55444 588999999998 4445788889999888999999999999999975446799999999999999999999999
Q ss_pred CCCCCCChHhhhhhcccccceeeecCCCCCCCeeEEeecC
Q psy15935 163 NKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD 202 (202)
Q Consensus 163 ~~~~f~~~~e~~~~li~n~~~~~~~~~~~~~~~~~~y~f~ 202 (202)
+.|+|++.+++.+.|||||+|+|+ +...+|+|||||+
T Consensus 279 ~~~~f~~~~~~~~~liyn~~p~~~---~~~~~~~q~y~f~ 315 (315)
T 1l9x_A 279 NNHHFKSESEEEKALIYQFSPIYT---GNISSFQQCYIFD 315 (315)
T ss_dssp SCCCCSSHHHHHHHSGGGCCCEEC---TTTSSCSEEEEEC
T ss_pred ccCCCCCHHHHHHhhhccCCCEec---CCCCCeeEEEeeC
Confidence 999999999999999999999999 6547799999996
No 2
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.90 E-value=9.5e-24 Score=166.60 Aligned_cols=106 Identities=23% Similarity=0.400 Sum_probs=84.4
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCc--cccccCChhHHHHhhhcceeeeeeeeeEeec
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKT--GLYKTFPKKSLKALAKNNITYNYHIWCITRA 83 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s--~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~ 83 (202)
.++||||||+|||+|+.+ +||++.+.....++...++.++ ..+ ++|+.+++. ..++++|+++|.
T Consensus 76 ~~~PvLGIC~G~QlL~~~-~gg~v~~~~~~~~g~~~~v~~~---~~~~~~l~~~~~~~--------~~v~~~H~~~v~-- 141 (195)
T 1qdl_B 76 KRTPILGVCLGHQAIGYA-FGAKIRRARKVFHGKISNIILV---NNSPLSLYYGIAKE--------FKATRYHSLVVD-- 141 (195)
T ss_dssp TTSCEEEETHHHHHHHHH-TTCEEEEEEEEEEEEEEEEEEC---CSSCCSTTTTCCSE--------EEEEEEEEEEEE--
T ss_pred CCCcEEEEehHHHHHHHH-hCCEEeccCCCcCCCceEEEEC---CCCHhHHHhcCCCc--------eEEeccccchhh--
Confidence 469999999999999999 9999876554456655556553 245 799888754 356999999997
Q ss_pred ccccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCccc
Q psy15935 84 TMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEW 133 (202)
Q Consensus 84 ~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~ 133 (202)
.+|++++++|++ ..++. +++++++++|++|+|||||++..++
T Consensus 142 -----~l~~~~~vla~s-~~~g~--i~a~~~~~~~~~gvQfHPE~~~~~~ 183 (195)
T 1qdl_B 142 -----EVHRPLIVDAIS-AEDNE--IMAIHHEEYPIYGVQFHPESVGTSL 183 (195)
T ss_dssp -----CCCTTEEEEEEE-SSSCC--EEEEEESSSSEEEESSBTTSTTCTT
T ss_pred -----hCCCCcEEEEEE-CCCCc--EEEEEeCCCCEEEEecCCCCCCCcc
Confidence 489999999996 24565 9999998889999999999986444
No 3
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.88 E-value=1.4e-22 Score=159.47 Aligned_cols=103 Identities=20% Similarity=0.269 Sum_probs=75.1
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.......+|....+. ...+.+|++++.. ..++++|++++.
T Consensus 75 ~~~PilGIC~G~Qll~~~-~Gg~v~~~~~~~~g~~~~~~----~~~~~l~~~~~~~--------~~v~~~H~~~v~---- 137 (192)
T 1i1q_B 75 GKLPIIGICLGHQAIVEA-YGGYVGQAGEILHGKATSIE----HDGQAMFAGLANP--------LPVARYHSLVGS---- 137 (192)
T ss_dssp TTBCEEEETHHHHHHHHH-TSCCCCC---CCSSEEEEEE----ECCCGGGTTSCSS--------EEEEECCC---C----
T ss_pred cCCCEEEECcChHHHHHH-hCCEEEeCCCcEecceeEEe----cCCChHHhcCCCC--------cEEEechhhHhh----
Confidence 468999999999999999 99987654334455433222 1356788887654 457999999986
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCccc
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEW 133 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~ 133 (202)
.+|++++++|.+ ++. +++++++++|++|+|||||++..++
T Consensus 138 ---~lp~~~~v~a~~---~~~--~~ai~~~~~~~~gvQfHPE~~~~~~ 177 (192)
T 1i1q_B 138 ---NVPAGLTINAHF---NGM--VMAVRHDADRVCGFQFHPESILTTQ 177 (192)
T ss_dssp ---CCCTTCEEEEEE---TTE--EEEEEETTTTEEEESSBTTSTTCTT
T ss_pred ---hCCCccEEEECC---CCc--EEEEEECCCCEEEEEccCcccCCcc
Confidence 489999999963 354 8999998889999999999986544
No 4
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.88 E-value=2.1e-22 Score=160.95 Aligned_cols=101 Identities=22% Similarity=0.419 Sum_probs=80.0
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.+...+..| ..++.++ ..++||+.++.. ..++++|++++.
T Consensus 84 ~~~PiLGIC~G~Qll~~~-lGg~v~~~~~~~~G-~~~v~~~---~~~~l~~~~~~~--------~~v~~~H~~~v~---- 146 (212)
T 2a9v_A 84 HNYPILGICVGAQFIALH-FGASVVKAKHPEFG-KTKVSVM---HSENIFGGLPSE--------ITVWENHNDEII---- 146 (212)
T ss_dssp CCSCEEEETHHHHHHHHH-TTCEEEEEEEEEEE-EEEEEES---CCCGGGTTCCSE--------EEEEEEEEEEEE----
T ss_pred CCCCEEEEChHHHHHHHH-hCCEEEcCCCcccC-ceeeEEC---CCChhHhcCCCc--------eEEEeEhhhhHh----
Confidence 368999999999999999 99998765444444 3445543 357788887654 346999999997
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccC
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNS 130 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~ 130 (202)
.+|++++++|++ .++. |+++++++.+++|+|||||+..
T Consensus 147 ---~l~~~~~vlA~s--~d~~--i~ai~~~~~~i~gvQfHPE~~~ 184 (212)
T 2a9v_A 147 ---NLPDDFTLAASS--ATCQ--VQGFYHKTRPIYATQFHPEVEH 184 (212)
T ss_dssp ---SCCTTEEEEEEC--SSCS--CSEEEESSSSEEEESSCTTSTT
T ss_pred ---hCCCCcEEEEEe--CCCC--EEEEEECCCCEEEEEeCCCCCC
Confidence 489999999996 3455 8999998789999999999975
No 5
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=162.56 Aligned_cols=101 Identities=20% Similarity=0.320 Sum_probs=80.9
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.+......| ..++.++ ..++||+.++.. ..++++|+++|.
T Consensus 95 ~~~PilGIC~G~Qll~~~-~GG~v~~~~~~~~G-~~~v~~~---~~~~l~~~l~~~--------~~v~~~H~~~v~---- 157 (218)
T 2vpi_A 95 IGKPVLGICYGMQMMNKV-FGGTVHKKSVREDG-VFNISVD---NTCSLFRGLQKE--------EVVLLTHGDSVD---- 157 (218)
T ss_dssp SSCCEEEETHHHHHHHHH-TTCCEEEEEECSCE-EEEEEEC---TTSGGGTTCCSE--------EEEEECSEEEES----
T ss_pred cCCCEEEEcHHHHHHHHH-hCCceEeCCCCccc-EEEEEEc---cCChhHhcCCCC--------cEEeehhhhHhh----
Confidence 468999999999999999 99998765444444 3456554 367899888754 346899999996
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCc
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSY 131 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~ 131 (202)
.+|++++++|++ + +. |+++++++.|++|+|||||+...
T Consensus 158 ---~l~~~~~vlA~s-~--~~--i~ai~~~~~~i~gvQfHPE~~~~ 195 (218)
T 2vpi_A 158 ---KVADGFKVVARS-G--NI--VAGIANESKKLYGAQFHPEVGLT 195 (218)
T ss_dssp ---SCCTTCEEEEEE-T--TE--EEEEEETTTTEEEESSCTTSTTS
T ss_pred ---hcCCCCEEEEEc-C--Ce--EEEEEECCCCEEEEEcCCCCCCC
Confidence 489999999996 2 44 99999888899999999999753
No 6
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.87 E-value=2.8e-22 Score=157.16 Aligned_cols=103 Identities=26% Similarity=0.456 Sum_probs=77.5
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.+...+.+|.. ++..+ ..+++|+.++.. ..++++|.+.+.
T Consensus 71 ~~~PilGIC~G~Q~l~~~-~gg~v~~~~~~~~G~~-~~~~~---~~~~l~~~~~~~--------~~~~~~h~~~v~---- 133 (189)
T 1wl8_A 71 FNVPILGICLGHQLIAKF-FGGKVGRGEKAEYSLV-EIEII---DEXEIFKGLPKR--------LKVWESHMDEVK---- 133 (189)
T ss_dssp TCSCEEEETHHHHHHHHH-HTCEEEECSCCSCEEE-EEEES---CC--CCTTSCSE--------EEEEECCSEEEE----
T ss_pred CCCeEEEEcHHHHHHHHH-hCCceecCCCcccCce-eEEEe---cCchHHhCCCCc--------eEEEEEeeeehh----
Confidence 469999999999999999 9999877554555543 34333 366788877654 235777777775
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcc
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYE 132 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e 132 (202)
.+|++++++|++ + ++. ++++++++.|++|+|||||+...+
T Consensus 134 ---~l~~~~~vla~s-~-~g~--i~a~~~~~~~~~gvQfHPE~~~~~ 173 (189)
T 1wl8_A 134 ---ELPPKFKILARS-E-TCP--IEAMKHEELPIYGVQFHPEVAHTE 173 (189)
T ss_dssp ---ECCTTEEEEEEE-S-SCS--CSEEEESSSCEEEESSCTTSTTST
T ss_pred ---hCCCCcEEEEEc-C-CCC--EEEEEeCCceEEEEecCCCcCCCc
Confidence 489999999997 3 455 899999888899999999997544
No 7
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.86 E-value=4.3e-21 Score=157.30 Aligned_cols=122 Identities=20% Similarity=0.319 Sum_probs=89.3
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccC------Ccc-------ceeeeeeEeccCCCccccccCChhHHHHhhhccee
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDC------NCF-------HENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNIT 72 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~------~~~-------~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~ 72 (202)
.++||||||+|||+|+.+ +||++..... ..+ ....++.++ .++.|++.++.. ..+
T Consensus 107 ~~~PiLGIC~G~Qll~~a-~Gg~v~~~~~~~~~~~~~h~~~~~~~~g~~~v~~~---~~s~l~~~~~~~--------~~v 174 (254)
T 3fij_A 107 AGKPIFAICRGMQLVNVA-LGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIE---PTSELAKHHPNK--------KLV 174 (254)
T ss_dssp TTCCEEEETHHHHHHHHH-TTCCEESSGGGSSSCCCCCBCCSCTTSCCEEEEEC---TTSSGGGTCCTT--------EEE
T ss_pred cCCCEEEECHHHHHHHHH-hCCceecccccccCccccccCCCCCccceEEEEeC---CCChHHHhcCCc--------EEE
Confidence 479999999999999999 9998764310 111 123344443 357788777653 346
Q ss_pred eeeeeeeEeecccccccCCCcceEeeeeecCCCceeEEEEeec-CCC-EEEEeeeCCccCcccccccCCCCCHHHHHHHH
Q psy15935 73 YNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSK-KYP-FVGIQFHPEKNSYEWNTVAHVNHSRIAIETSR 150 (202)
Q Consensus 73 ~~~H~~~v~~~~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~-~~p-i~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~ 150 (202)
..+|++.|. .|+++++++|++ .++. |++++.+ ++| ++|+|||||+..... ..+.
T Consensus 175 ~~~H~~~v~-------~l~~g~~v~a~s--~dg~--ieai~~~~~~~~~~gvQfHPE~~~~~~-------------~~~~ 230 (254)
T 3fij_A 175 NSLHHQFIK-------KLAPSFKVTART--ADGM--IEAVEGDNLPSWYLGVQWHPELMFQTD-------------PESE 230 (254)
T ss_dssp CCBCSCEES-------SCCSSEEEEEEE--TTCC--EEEEEESSCSSCEEEESSCGGGTGGGC-------------HHHH
T ss_pred EEeccchhh-------ccCCCcEEEEEe--CCCc--EEEEEecCCCCeEEEEEcCCccCCCCC-------------chHH
Confidence 789999886 589999999996 4566 9999998 887 999999999975321 1345
Q ss_pred HHHHHHHHHHHhC
Q psy15935 151 LFYDWIVTEASKN 163 (202)
Q Consensus 151 ~~~~~f~~~ar~~ 163 (202)
.+.+.|++.|++.
T Consensus 231 ~lf~~Fv~~~~~~ 243 (254)
T 3fij_A 231 QLFQALVDESKKT 243 (254)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHH
Confidence 6777777888764
No 8
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.85 E-value=1.3e-21 Score=175.31 Aligned_cols=131 Identities=20% Similarity=0.257 Sum_probs=93.8
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++........|. ..+.+. ..++||++++............++++|++.|.
T Consensus 81 ~~~PvLGIC~G~Qlla~~-lGG~V~~~~~~e~G~-~~v~~~---~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~---- 151 (527)
T 3tqi_A 81 IGCPVLGICYGMQTMAYQ-LGGKVNRTAKAEFGH-AQLRVL---NPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVS---- 151 (527)
T ss_dssp SSSCEEEETHHHHHHHHH-SSSCBC-----CEEE-EEEEES---SCTTTTSSCCSBCCTTSCCEEEEEEESSSCBC----
T ss_pred cCCCEEEEChHHHHHHHH-cCCeEEeCCCccccc-eEEEEc---CCChhhcCCccccccccccceEEEEEcccchh----
Confidence 479999999999999999 999987765555553 345553 35679999875210000012457999999997
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKH 165 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~ar~~~~ 165 (202)
.||++++++|++ .++. +++++++++++||+|||||+...+.+ .+.+.+|+.+.|+....
T Consensus 152 ---~lp~g~~v~A~s--~~~~--i~ai~~~~~~~~GvQFHPE~~~t~~G--------------~~ll~nF~~~i~~~~~~ 210 (527)
T 3tqi_A 152 ---ELPPGFEATACT--DNSP--LAAMADFKRRFFGLQFHPEVTHTPQG--------------HRILAHFVIHICQCIPN 210 (527)
T ss_dssp ---SCCTTCEEEEEE--TTEE--EEEEECSSSCEEEESBCSSSTTSTTH--------------HHHHHHHHHTTSCCCCC
T ss_pred ---ccCCCCEEEEEe--CCCc--EEEEEcCCCCEEEEEecccccccccc--------------chhhhhhhhhcccccch
Confidence 599999999996 3455 99999988899999999999765443 25577887787776544
Q ss_pred C
Q psy15935 166 A 166 (202)
Q Consensus 166 ~ 166 (202)
.
T Consensus 211 w 211 (527)
T 3tqi_A 211 W 211 (527)
T ss_dssp C
T ss_pred h
Confidence 3
No 9
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.85 E-value=9.5e-22 Score=176.22 Aligned_cols=129 Identities=12% Similarity=0.187 Sum_probs=94.1
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++........|. ..+.+. ..++||++++............++++|+++|.
T Consensus 78 ~g~PvLGIC~G~Qlla~~-~GG~V~~~~~~e~G~-~~v~~~---~~~~L~~~l~~~~~~~~~~~~~v~~~H~~~V~---- 148 (525)
T 1gpm_A 78 AGVPVFGVCYGMQTMAMQ-LGGHVEASNEREFGY-AQVEVV---NDSALVRGIEDALTADGKPLLDVWMSHGDKVT---- 148 (525)
T ss_dssp SSSCEEEETHHHHHHHHH-HTCEEECCSSCEEEE-EEEEEC---SCCTTTTTCCSEECTTSCEEEEEEEEECSEEE----
T ss_pred CCCCEEEEChHHHHHHHH-cCCEEEeCCCcccce-EEEEeC---CCCHhhccCccccccccccceEEEEEccceee----
Confidence 368999999999999999 999987765444553 345543 35689998875211111112457999999997
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNK 164 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~ar~~~ 164 (202)
.+|++++++|++ .++. |+++++++.++||+|||||+...+.+ .+.+.+|+.+.|+...
T Consensus 149 ---~lp~g~~v~A~s--~~~~--i~ai~~~~~~i~gvQFHPE~~~~~~g--------------~~ll~nF~~~i~~~~~ 206 (525)
T 1gpm_A 149 ---AIPSDFITVAST--ESCP--FAIMANEEKRFYGVQFHPEVTHTRQG--------------MRMLERFVRDICQCEA 206 (525)
T ss_dssp ---ECCTTCEEEEEC--SSCS--CSEEEETTTTEEEESBCTTSTTSTTH--------------HHHHHHHHHTTSCCCC
T ss_pred ---eCCCCCEEEEEC--CCCC--EEEEEECCCCEEEEecCCCCCcchhH--------------HHHHHHHHHhhhhccc
Confidence 499999999996 3455 89999988899999999999754322 2556777767776543
No 10
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.85 E-value=3.1e-21 Score=172.15 Aligned_cols=120 Identities=20% Similarity=0.326 Sum_probs=89.0
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++........|. ..+.+. . +.||++++.. ..++++|+++|.
T Consensus 70 ~~~PvLGIC~G~Qlla~~-~GG~v~~~~~~e~G~-~~v~~~---~-~~l~~~~~~~--------~~v~~~H~~~v~---- 131 (503)
T 2ywb_A 70 SGLPLLGICYGMQLLAQE-LGGRVERAGRAEYGK-ALLTRH---E-GPLFRGLEGE--------VQVWMSHQDAVT---- 131 (503)
T ss_dssp SSCCEEEETHHHHHHHHT-TTCEEECC---CEEE-EECSEE---C-SGGGTTCCSC--------CEEEEECSCEEE----
T ss_pred CCCCEEEECHHHHHHHHH-hCCeEeeCCCCccce-EEEEec---C-cHHhhcCCCc--------cEEEEECCCccc----
Confidence 469999999999999999 999987765444453 345443 2 7799888753 457999999997
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKH 165 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~ar~~~~ 165 (202)
.+|++++++|++ .++. |+++++++.++||+|||||+...+.+ .+.+.+|+ +.|.....
T Consensus 132 ---~lp~g~~v~A~s--~~~~--i~ai~~~~~~~~gvQFHPE~~~~~~g--------------~~ll~~F~-~~~~~~~~ 189 (503)
T 2ywb_A 132 ---APPPGWRVVAET--EENP--VAAIASPDGRAYGVQFHPEVAHTPKG--------------MQILENFL-ELAGVKRD 189 (503)
T ss_dssp ---ECCTTCEEEEEC--SSCS--CSEEECTTSSEEEESBCTTSTTSTTH--------------HHHHHHHH-HHTTCCCC
T ss_pred ---cCCCCCEEEEEE--CCCC--EEEEEeCCCCEEEEecCCCccccccc--------------HHHHHHHH-HHhhhhcc
Confidence 499999999996 3455 89999988899999999999754322 13455555 77776543
No 11
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=99.84 E-value=1e-20 Score=162.74 Aligned_cols=116 Identities=20% Similarity=0.334 Sum_probs=84.4
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.+...+.++.+.|+.... ..++ ..+.++|+++|.+.
T Consensus 260 ~~~PILGIClG~QLLa~A-~GG~v~k~~~gh~g~n~pv~~~~---~g~v---------------~its~~H~~aV~~~-- 318 (379)
T 1a9x_B 260 TDIPVFGICLGHQLLALA-SGAKTVKMKFGHHGGNHPVKDVE---KNVV---------------MITAQNHGFAVDEA-- 318 (379)
T ss_dssp SCCCEEEETHHHHHHHHH-TTCCEEEEEEEEEEEEEEEEETT---TTEE---------------EEEEEEEEEEECST--
T ss_pred cCCCEEEECchHHHHHHH-hCcEEEecccccccCceeeEecC---CCcE---------------EEEecCccceEecc--
Confidence 469999999999999999 99998876655555555553211 1111 22467999999854
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASK 162 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~ar~ 162 (202)
.||+++++++.+ ..++. +++++++++|++|+|||||+...+. + +..+.+.|++.+++
T Consensus 319 ---~Lp~~~~v~a~s-~~Dg~--ieai~~~~~pi~gVQFHPE~~~~p~--------d------~~~Lf~~Fl~~~~~ 375 (379)
T 1a9x_B 319 ---TLPANLRVTHKS-LFDGT--LQGIHRTDKPAFSFQGNPEASPGPH--------D------AAPLFDHFIELIEQ 375 (379)
T ss_dssp ---TCCTTEEEEEEE-TTTCC--EEEEEESSSSEEEESSCTTCSSSCS--------T------TTHHHHHHHHHHHH
T ss_pred ---cCCCCeEEEEEe-CCCCc--EEEEEECCCCEEEEEeCCcCCCCcc--------c------HHHHHHHHHHHHHH
Confidence 389999999996 35666 9999998899999999999975332 1 13456667776654
No 12
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.83 E-value=5.7e-21 Score=172.11 Aligned_cols=123 Identities=19% Similarity=0.369 Sum_probs=89.6
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccC----------------------------CCcccccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNG----------------------------SKTGLYKT 57 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~----------------------------~~s~lf~~ 57 (202)
.++||||||+|||+|+.+ +||++.......+|. ..+.+.... ..++||++
T Consensus 82 ~g~PvLGIC~G~QlLa~~-lGG~V~~~~~~E~G~-~~l~~~~~~~~~~~p~v~~~~~~~~~mg~~~n~~~~~~~~~Lf~g 159 (556)
T 3uow_A 82 KKIPIFGICYGMQEIAVQ-MNGEVKKSKTSEYGC-TDVNILRNDNINNITYCRNFGDSSSAMDLYSNYKLMNETCCLFEN 159 (556)
T ss_dssp TTCCEEEETHHHHHHHHH-TTCEEEEEEEEEEEE-EEEEECCTTGGGGCSGGGGC---CCHHHHHTTSCCCC--CGGGTT
T ss_pred cCCCEEEECHHHHHHHHH-hCCcEecCCCcccCC-cceeeccCcccccccceecccccccccccccccccccccchhhcc
Confidence 369999999999999999 999987654434443 335544322 12367777
Q ss_pred C-ChhHHHHhhhcceeeeeeeeeEeecccccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccc
Q psy15935 58 F-PKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTV 136 (202)
Q Consensus 58 ~-~~~~~~~~~~~~~~~~~H~~~v~~~~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~ 136 (202)
+ +.. ..++++|++.+. .+|++++++|++ .++. ++++++++.++||+|||||++..+.+.
T Consensus 160 l~~~~--------~~v~~~H~d~V~-------~lp~g~~vlA~s--~~~~--i~ai~~~~~~i~GvQFHPE~~~~~~G~- 219 (556)
T 3uow_A 160 IKSDI--------TTVWMNHNDEVT-------KIPENFYLVSSS--ENCL--ICSIYNKEYNIYGVQYHPEVYESLDGE- 219 (556)
T ss_dssp CCSSE--------EEEEEEEEEEEE-------ECCTTCEEEEEE--TTEE--EEEEEETTTTEEEESSCTTSTTSTTHH-
T ss_pred cccCc--------eEEEEEccceee-------ccCCCcEEEEEe--CCCC--EEEEEECCCCEEEEEcCCCCCccccch-
Confidence 7 543 457999999997 499999999996 3455 999999888999999999998654432
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy15935 137 AHVNHSRIAIETSRLFYDWIVTEASKN 163 (202)
Q Consensus 137 ~~~~h~~~~~~~~~~~~~~f~~~ar~~ 163 (202)
+.+.+|....|...
T Consensus 220 -------------~ll~nFl~~i~g~~ 233 (556)
T 3uow_A 220 -------------LMFYNFAYNICKCK 233 (556)
T ss_dssp -------------HHHHHHHTTTTCCC
T ss_pred -------------HHHHHHHHHhhccc
Confidence 45566665666543
No 13
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.82 E-value=5.3e-21 Score=155.11 Aligned_cols=101 Identities=19% Similarity=0.196 Sum_probs=79.2
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.+...+..| ..++.++.....+++|.+++..+ .++++|++..
T Consensus 83 ~~~PvLGIClG~QlL~~~-~Gg~v~~~~~~~~G-~~~v~~~~~~~~~~l~~~~~~~~--------~v~~~H~~~~----- 147 (236)
T 3l7n_A 83 SEKIIVGVCLGAQLMGVA-YGADYLHSPKKEIG-NYLISLTEAGKMDSYLSDFSDDL--------LVGHWHGDMP----- 147 (236)
T ss_dssp TTCEEEEETHHHHHHHHH-TTCCCEEEEEEEEE-EEEEEECTTGGGCGGGTTSCSEE--------EEEEEEEEEC-----
T ss_pred cCCCEEEEchHHHHHHHH-hCCEEecCCCceee-eEEEEEccCcccChHHhcCCCCc--------EEEEecCCcc-----
Confidence 469999999999999999 99998776555555 45677765545678999887653 4689999752
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
.+|++++++|+| +. +. +++++.++ +++|+|||||++
T Consensus 148 ---~lp~~~~vla~s-~~-~~--~~a~~~~~-~v~gvQfHPE~~ 183 (236)
T 3l7n_A 148 ---GLPDKAQVLAIS-QG-CP--RQIIKFGP-KQYAFQCHLEFT 183 (236)
T ss_dssp ---CCCTTCEEEEEC-SS-CS--CSEEEEET-TEEEESSBSSCC
T ss_pred ---cCCChheEEEEC-CC-CC--EEEEEECC-CEEEEEeCCCCC
Confidence 489999999997 44 44 67877754 899999999986
No 14
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=99.82 E-value=1.1e-20 Score=156.59 Aligned_cols=136 Identities=20% Similarity=0.294 Sum_probs=85.5
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeecc-ccC-----Cc-----------cc----------eeeeeeEeccCCCccccccC
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELR-TDC-----NC-----------FH----------ENLSLRFLKNGSKTGLYKTF 58 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~-~~~-----~~-----------~~----------~~~~i~~~~~~~~s~lf~~~ 58 (202)
.++||||||+|||+|+.+ +||++.. ... +. ++ .+.++.++ ...+.+++.+
T Consensus 95 ~~~PilGIC~G~Qll~~a-~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~v~~~--~~~s~l~~~~ 171 (273)
T 2w7t_A 95 NNIPYFGVXLGMQVAVIE-LSRNVVGWSDANSEEFNKESTHQVVRIMDCDRNKMGANMHLGACDVYIV--EKSSIMAKIY 171 (273)
T ss_dssp HTCCEEEETHHHHHHHHH-HHHHTTCCTTCEETTTCTTCSCEEEECCGGGBCSSCBCCEEEEEEEEEC--CTTSHHHHHT
T ss_pred CCCcEEEECcCHHHHHHH-HhCccccccCCchhhcccccCCCceeeccccccccCCcccccceEEEEe--cCCcHHHHHh
Confidence 358999999999999999 9998741 110 00 00 01112221 0123343333
Q ss_pred ChhHHHHhhhcceee--eeeeeeEeecccccccC-CCcceEeeeeecCC--CceeEEEEeecCCCE-EEEeeeCCccCcc
Q psy15935 59 PKKSLKALAKNNITY--NYHIWCITRATMNSTKL-SDAWDILTESKAGN--GKKFVSTVQSKKYPF-VGIQFHPEKNSYE 132 (202)
Q Consensus 59 ~~~~~~~~~~~~~~~--~~H~~~v~~~~~~~~~L-~~~~~vla~s~~~~--~~~~v~~i~~~~~pi-~gvQfHPE~~~~e 132 (202)
+ +...++ +.|+|++.++... .| |++++++|++.+.+ + .+|++++++++|+ +|+|||||+...+
T Consensus 172 ~--------~~~~v~~~H~Hsy~v~~~~v~--~l~~~g~~v~A~s~d~~~~g-~~ieaie~~~~p~~~GvQfHPE~~~~~ 240 (273)
T 2w7t_A 172 S--------KSNIVVERHRHRYEVNTAYFE--DLRKAGLCISAVTDPTFSSR-CRVEAVENPSLRFFLAVQFHPEFISTP 240 (273)
T ss_dssp T--------TCSEEEEEEEECCEECGGGHH--HHHHTTCEEEEESCTTCCTT-CCEEEEECTTSSSEEEESSCGGGSCBT
T ss_pred C--------CCceEEeecccccccCHHHHH--hhccCCcEEEEEcCCcCCCC-CeEEEEEcCCCCeEEEEeCCCCcCCCC
Confidence 2 123344 4678999875432 47 78999999973211 3 2499999998885 5999999998643
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy15935 133 WNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPS 169 (202)
Q Consensus 133 ~~~~~~~~h~~~~~~~~~~~~~~f~~~ar~~~~~f~~ 169 (202)
... ..+.+.|++.|+++.+.|.+
T Consensus 241 ~~~--------------~~l~~~Fv~~~~~~~~~~~~ 263 (273)
T 2w7t_A 241 MDP--------------APTYLSFMAAAAKKDYVWPQ 263 (273)
T ss_dssp TBC--------------CHHHHHHHHHHHTCCCCCCS
T ss_pred Cch--------------HHHHHHHHHHHHHHHHhhhh
Confidence 211 24666778889998888763
No 15
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.82 E-value=4.8e-21 Score=156.73 Aligned_cols=100 Identities=13% Similarity=0.076 Sum_probs=77.9
Q ss_pred cccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeecccc
Q psy15935 7 YFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATMN 86 (202)
Q Consensus 7 ~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~~ 86 (202)
++||||||+|+|+|+.+ +||++.+...+..| ..++.++.....+++| +++.. ..++++|++.+.
T Consensus 82 ~~PvlGIC~G~Qll~~~-lGG~V~~~~~~e~G-~~~v~~~~~~~~~~l~-g~~~~--------~~v~~~H~~~v~----- 145 (250)
T 3m3p_A 82 RVPVIGHCLGGQLLAKA-MGGEVTDSPHAEIG-WVRAWPQHVPQALEWL-GTWDE--------LELFEWHYQTFS----- 145 (250)
T ss_dssp TCCEEEETHHHHHHHHH-TTCCEEEEEEEEEE-EEEEEECSSHHHHHHH-SCSSC--------EEEEEEEEEEEC-----
T ss_pred CCCEEEECHHHHHHHHH-hCCEEEeCCCCcee-eEEEEEecCCCCcccc-cCCCc--------cEEEEEccceee-----
Confidence 68999999999999999 99998877654444 4556665322235677 66654 456999999984
Q ss_pred cccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccC
Q psy15935 87 STKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNS 130 (202)
Q Consensus 87 ~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~ 130 (202)
||++++++|+| + ++. +++++.++ +++|+|||||++.
T Consensus 146 ---lp~~~~vlA~s-~-~~~--~~a~~~~~-~~~GvQfHPE~~~ 181 (250)
T 3m3p_A 146 ---IPPGAVHILRS-E-HCA--NQAYVLDD-LHIGFQCHIEMQA 181 (250)
T ss_dssp ---CCTTEEEEEEE-T-TEE--EEEEEETT-TEEEESSCTTCCH
T ss_pred ---cCCCCEEEEEe-C-CCC--EEEEEECC-eeEEEEeCCcCCH
Confidence 89999999997 3 344 89999866 6999999999975
No 16
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.81 E-value=2.3e-20 Score=151.71 Aligned_cols=98 Identities=23% Similarity=0.249 Sum_probs=75.9
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.+...+.+....++.. ...++||+.+++. ..++++|++.+.
T Consensus 92 ~~~PiLGIC~G~QlL~~a-lGG~v~~~~~g~~~G~~~v~~---~~~~~l~~~~~~~--------~~~~~~H~~~v~---- 155 (239)
T 1o1y_A 92 KEIPFLGICLGSQMLAKV-LGASVYRGKNGEEIGWYFVEK---VSDNKFFREFPDR--------LRVFQWHGDTFD---- 155 (239)
T ss_dssp HTCCEEEETHHHHHHHHH-TTCCEEECTTCCEEEEEEEEE---CCCCGGGTTSCSE--------EEEEEEESEEEC----
T ss_pred CCCCEEEEchhHHHHHHH-cCCeEecCCCCCccccEEEEE---CCCCchHHhCCCC--------ceeEeecCCccc----
Confidence 358999999999999999 999988766522333455553 2467899888754 346899999884
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
+|++++++|++ ++ +. +++++.++ ++|+|||||++
T Consensus 156 ----lp~~~~vlA~s-~~-~~--iea~~~~~--i~gvQfHPE~~ 189 (239)
T 1o1y_A 156 ----LPRRATRVFTS-EK-YE--NQGFVYGK--AVGLQFHIEVG 189 (239)
T ss_dssp ----CCTTCEEEEEC-SS-CS--CSEEEETT--EEEESSBSSCC
T ss_pred ----cCCCCEEEEEc-CC-CC--EEEEEECC--EEEEEeCccCC
Confidence 88999999996 43 43 78999864 99999999985
No 17
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.81 E-value=3.8e-20 Score=170.21 Aligned_cols=119 Identities=18% Similarity=0.291 Sum_probs=87.0
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.......+| ..++.+. ..+.||++++.. ..++++|+++|.
T Consensus 100 ~g~PvLGIC~G~QlLa~~-lGG~v~~~~~~e~G-~~~v~~~---~~~~Lf~~l~~~--------~~v~~~H~~~V~---- 162 (697)
T 2vxo_A 100 IGKPVLGICYGMQMMNKV-FGGTVHKKSVREDG-VFNISVD---NTCSLFRGLQKE--------EVVLLTHGDSVD---- 162 (697)
T ss_dssp SSCCEEEEEHHHHHHHHH-TTCCBCC--------CEEEEEC---TTSGGGTTCCSE--------EEECCCSSCCBS----
T ss_pred CCCCEEEECHHHHHHHHH-hCCeEeecCCCccc-eEEEEec---CCChhhhcCCcc--------Ccceeeccccee----
Confidence 358999999999999999 99998776555555 3456653 357899988754 346899999996
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKN 163 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~ar~~ 163 (202)
.+|++++++|++ + +. |+++++++.++||+|||||+...+.+ .+.+.+|+.+.|...
T Consensus 163 ---~lp~g~~vlA~s-~--~~--i~ai~~~~~~i~GvQFHPE~~~t~~g--------------~~ll~nFl~~i~~~~ 218 (697)
T 2vxo_A 163 ---KVADGFKVVARS-G--NI--VAGIANESKKLYGAQFHPEVGLTENG--------------KVILKNFLYDIAGCS 218 (697)
T ss_dssp ---SCCTTCEEEEEE-T--TE--EEEEEETTTTEEEESSCTTSSSSTTH--------------HHHHHHHHTTTTCCC
T ss_pred ---cCCCCeEEEEEe-C--Cc--eEEEEeCCCCEEEEEecccCCCCccc--------------hhhhhhhhhcccccc
Confidence 599999999996 3 34 99999999999999999999754332 144555555766653
No 18
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.80 E-value=1.1e-19 Score=144.63 Aligned_cols=101 Identities=25% Similarity=0.386 Sum_probs=65.8
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccc------eee---------e---eeEeccCCCccccccCChhHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFH------ENL---------S---LRFLKNGSKTGLYKTFPKKSLKALA 67 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~------~~~---------~---i~~~~~~~~s~lf~~~~~~~~~~~~ 67 (202)
.++||||||+|||+|+.+ +|+.+.......++ ... + .........+++|++++..
T Consensus 71 ~~~PvlGIClG~QlL~~~-~g~~~~~~~~~~~gl~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------ 143 (211)
T 4gud_A 71 VEKPLLGICLGMQLLGKL-SEEKGQKADEIVQCLGLVDGEVRLLQTGDLPLPHMGWNTVQVKEGHPLFNGIEPD------ 143 (211)
T ss_dssp CCSCEEEETHHHHTTSSE-ECCC----CCCEECCCSSSCEEEECCCTTSCSSEEEEECCEECTTCGGGTTCCTT------
T ss_pred cCCCEEEEchhHhHHHHH-hCCcccccCCccccceeccceEEEcccCCcceeeccceeeeeeccChhhcCCCCC------
Confidence 368999999999999999 88865433221111 000 0 0011113456788887765
Q ss_pred hcceeeeeeeeeEeecccccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 68 KNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 68 ~~~~~~~~H~~~v~~~~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
..++++|++.+. .+..++|++ .++..++++++. +|+||+|||||++
T Consensus 144 --~~~~~~H~~~v~----------~~~~~~a~~--~~g~~~~~~v~~--~~v~GvQFHPE~s 189 (211)
T 4gud_A 144 --AYFYFVHSFAMP----------VGDYTIAQC--EYGQPFSAAIQA--GNYYGVQFHPERS 189 (211)
T ss_dssp --CCEEEEESEECC----------CCTTEEEEE--ESSSEEEEEEEE--TTEEEESSCGGGS
T ss_pred --cEEEEEeeEEeC----------CCCeEEEEe--cCCCeEEEEEeC--CCEEEEEccCEec
Confidence 456899998764 345688886 456667777776 7899999999985
No 19
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=99.79 E-value=3.3e-20 Score=154.76 Aligned_cols=135 Identities=19% Similarity=0.270 Sum_probs=86.6
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeecc--c-c---CC------------ccc----------eeeeeeEeccCCCcccccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELR--T-D---CN------------CFH----------ENLSLRFLKNGSKTGLYKT 57 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~--~-~---~~------------~~~----------~~~~i~~~~~~~~s~lf~~ 57 (202)
.++||||||+|||+|+.+ +||++.. . . .+ .+. ...++.++. ..+.+++.
T Consensus 118 ~~~PilGIC~G~Q~l~~a-~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~~~~~~~~~g~~~v~~~~--~~s~l~~~ 194 (289)
T 2v4u_A 118 KKIPFLGVXLGMQLAVIE-FARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKT--ENSILRKL 194 (289)
T ss_dssp TTCCEEEETHHHHHHHHH-HHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTTCSSCBCEEEEEEEEESC--SCCHHHHH
T ss_pred cCCcEEEECccHHHHHHH-HhccccccccCcccccCccccccceecchhhcccccCCccccceEEEEEec--CCCHHHHh
Confidence 368999999999999999 9998741 1 0 10 011 012233210 23344433
Q ss_pred CChhHHHHhhhcceeeeeeeeeEeecccccccCC-CcceEeeeeecCCCceeEEEEeecCCCEE-EEeeeCCccCccccc
Q psy15935 58 FPKKSLKALAKNNITYNYHIWCITRATMNSTKLS-DAWDILTESKAGNGKKFVSTVQSKKYPFV-GIQFHPEKNSYEWNT 135 (202)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~H~~~v~~~~~~~~~L~-~~~~vla~s~~~~~~~~v~~i~~~~~pi~-gvQfHPE~~~~e~~~ 135 (202)
++... ....++.|+++|+++.+. .|+ ++++++|++ .++. +|++++++++|++ |+|||||+...+..
T Consensus 195 ~~~~~------~v~~~H~H~y~vn~~~v~--~l~~~g~~v~A~s--~dg~-~ieaie~~~~p~~lGvQfHPE~~~~~~~- 262 (289)
T 2v4u_A 195 YGDVP------FIEERHRHRFEVNPNLIK--QFEQNDLSFVGQD--VDGD-RMEIIELANHPYFVGVQFHPEFSSRPMK- 262 (289)
T ss_dssp TTSCS------EEEEEEEECEEECGGGSG--GGTTSSEEEEEEE--TTSC-SEEEEEESSSSCEEEESSBGGGGCBTTB-
T ss_pred cCCCc------eEEEecccccccCHHHHH--hcccCCeEEEEEc--CCCC-eEEEEEcCCCCeEEEEECCCCCCCCCCc-
Confidence 33210 112356678999876554 588 999999997 3441 3899999888855 99999999754321
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCC
Q psy15935 136 VAHVNHSRIAIETSRLFYDWIVTEASKNKHAYP 168 (202)
Q Consensus 136 ~~~~~h~~~~~~~~~~~~~~f~~~ar~~~~~f~ 168 (202)
+ ..+.+.|+++|+++.+.|.
T Consensus 263 ----~---------~~lf~~Fv~~~~~~~~~~~ 282 (289)
T 2v4u_A 263 ----P---------SPPYLGLLLAATGNLNAYL 282 (289)
T ss_dssp ----C---------CHHHHHHHHHHHTCHHHHH
T ss_pred ----h---------HHHHHHHHHHHHhhhhhhh
Confidence 1 2356778888998877764
No 20
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.74 E-value=1.8e-18 Score=135.01 Aligned_cols=110 Identities=21% Similarity=0.353 Sum_probs=72.5
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccC--------CCccccccCChhHHHHhhhcceeeeeee
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNG--------SKTGLYKTFPKKSLKALAKNNITYNYHI 77 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~--------~~s~lf~~~~~~~~~~~~~~~~~~~~H~ 77 (202)
.++||||||+|||+|+.+ +||++. . .+. .+....... ..+.++.++ +...++++|+
T Consensus 67 ~~~PilGIC~G~Qll~~~-~gg~~~-~-lg~----~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~H~ 130 (186)
T 2ywj_A 67 SNLPILGTCAGMVLLSKG-TGINQI-L-LEL----MDITVKRNAYGRQVDSFEKEIEFKDL---------GKVYGVFIRA 130 (186)
T ss_dssp CCCCEEEETHHHHHHSSC-CSSCCC-C-CCC----SSEEEETTTTCSSSCCEEEEEEETTT---------EEEEEEESSC
T ss_pred cCCcEEEECHHHHHHHHH-hCCCcC-c-cCC----CceeEEeccCCCcccceecccccccC---------CcEEEEEEec
Confidence 468999999999999999 999732 1 111 111111100 011234333 1235688999
Q ss_pred eeEeecccccccC-CCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHH
Q psy15935 78 WCITRATMNSTKL-SDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWI 156 (202)
Q Consensus 78 ~~v~~~~~~~~~L-~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f 156 (202)
++|. .+ |++++++|++ ++. ++++++ .+++|+|||||++.. +..+.+.|
T Consensus 131 ~~v~-------~l~~~~~~v~a~s---d~~--~~a~~~--~~~~gvQfHPE~~~~-----------------g~~l~~~F 179 (186)
T 2ywj_A 131 PVVD-------KILSDDVEVIARD---GDK--IVGVKQ--GKYMALSFHPELSED-----------------GYKVYKYF 179 (186)
T ss_dssp CEEE-------EECCTTCEEEEEE---TTE--EEEEEE--TTEEEESSCGGGSTT-----------------HHHHHHHH
T ss_pred ceee-------ecCCCCeEEEEEE---CCE--EEEEee--CCEEEEECCCCcCCc-----------------hhHHHHHH
Confidence 9997 47 8999999996 354 899997 479999999997631 24456667
Q ss_pred HHHHHh
Q psy15935 157 VTEASK 162 (202)
Q Consensus 157 ~~~ar~ 162 (202)
++.|++
T Consensus 180 ~~~~~~ 185 (186)
T 2ywj_A 180 VENCVK 185 (186)
T ss_dssp HHHHTC
T ss_pred HHHHhh
Confidence 776654
No 21
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.73 E-value=2.2e-18 Score=157.34 Aligned_cols=102 Identities=14% Similarity=0.136 Sum_probs=73.3
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeeccc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATM 85 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~ 85 (202)
.++||||||+|||+|+.+ +||++.+...+.+|...++... .+.++..++..+ .++.+|+..+.
T Consensus 520 ~~iPiLGIClG~QlLa~a-lGG~V~~~~~~~~G~~~~i~~~----~~~l~~~~~~~~--------~v~~~h~~~~~---- 582 (645)
T 3r75_A 520 EGKPFMAVCLSHQILNAI-LGIPLVRREVPNQGIQVEIDLF----GQRERVGFYNTY--------VAQTVRDEMDV---- 582 (645)
T ss_dssp HTCCEEEETHHHHHHHHH-TTCCEEEEEEEEEEEEEEEEET----TEEEEEEEEEEE--------EEBCSCSEEEE----
T ss_pred CCCCEEEECHHHHHHHHH-hCCEEEcCCCcccccceEEeee----cCcceecCCCcE--------EEEEehhhccc----
Confidence 368999999999999999 9999887766666765555432 344555544332 22334444433
Q ss_pred ccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCccc
Q psy15935 86 NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEW 133 (202)
Q Consensus 86 ~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~ 133 (202)
.+|++++++|++ .++. |++++++ +++|+|||||+...+.
T Consensus 583 ---~lp~g~~v~A~s--~dg~--i~Ai~~~--~~~GVQFHPE~~~t~~ 621 (645)
T 3r75_A 583 ---DGVGTVAISRDP--RTGE--VHALRGP--TFSSMQFHAESVLTVD 621 (645)
T ss_dssp ---TTTEEEEEEECT--TTCB--EEEEEET--TEEEESSBTTSTTCTT
T ss_pred ---cCCCCeEEEEEc--CCCc--EEEEEcC--CEEEEEeCCeecCCcc
Confidence 489999999996 4565 9999985 4799999999976544
No 22
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.72 E-value=2.9e-17 Score=130.37 Aligned_cols=111 Identities=23% Similarity=0.236 Sum_probs=72.7
Q ss_pred CcccEEeEcHHHHHHHhh-hcCCeeccccCC-ccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeee---eeeE
Q psy15935 6 DYFPILGICLGFELLLFV-ENKEKELRTDCN-CFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYH---IWCI 80 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~-~~gg~~~~~~~~-~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H---~~~v 80 (202)
.++||||||+|+|+|+.+ .++|++...... .+....++.+.. ..++||+.+++.. ...+..+| ++.+
T Consensus 78 ~~~pilgIC~G~qlLa~aGll~g~v~~~~~~~~~~g~~~v~~~~--~~~~l~~~~~~~~------~~~~~~~H~~~s~~~ 149 (213)
T 3d54_D 78 RGKLIMGICNGFQILIEMGLLKGALLQNSSGKFICKWVDLIVEN--NDTPFTNAFEKGE------KIRIPIAHGFGRYVK 149 (213)
T ss_dssp HTCEEEECHHHHHHHHHHTSSCSEEECCSSSSCBCCEEEEEECC--CSSTTSTTSCTTC------EEEEECCBSSCEEEC
T ss_pred CCCEEEEECHHHHHHHHcCCCCCCeecCCCCceEeeeEEEEeCC--CCCceeeccCCCC------EEEEEeecCceEEEe
Confidence 358999999999999985 256776654322 234444555431 4678888876421 01223478 5554
Q ss_pred eecccccccCCCcceEeeeeecCCCc-eeEEEEeecCCCEEEEeeeCCccCccc
Q psy15935 81 TRATMNSTKLSDAWDILTESKAGNGK-KFVSTVQSKKYPFVGIQFHPEKNSYEW 133 (202)
Q Consensus 81 ~~~~~~~~~L~~~~~vla~s~~~~~~-~~v~~i~~~~~pi~gvQfHPE~~~~e~ 133 (202)
. |++++++|++.+.++. .-|+++++++.+++|+|||||++...|
T Consensus 150 ~---------~~~~~~~a~~~~~ng~~~~i~a~~~~~~~~~gvQfHPE~~~~~~ 194 (213)
T 3d54_D 150 I---------DDVNVVLRYVKDVNGSDERIAGVLNESGNVFGLMPHPERAVEEL 194 (213)
T ss_dssp S---------SCCEEEEEESSCSSCCGGGEEEEECSSSCEEEECSCSTTTTSTT
T ss_pred c---------CCCcEEEEEcCCCCCCccceeEEEcCCCCEEEEeCCHHHhcCHh
Confidence 3 3577889986322230 128999887789999999999987654
No 23
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.71 E-value=7e-18 Score=133.19 Aligned_cols=102 Identities=23% Similarity=0.262 Sum_probs=61.3
Q ss_pred CcccEEeEcHHHHHHHhhhcC--CeeccccCCccceeeeee--EeccCCCccccccCChhHHHHhhhcceeeeeeeeeEe
Q psy15935 6 DYFPILGICLGFELLLFVENK--EKELRTDCNCFHENLSLR--FLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCIT 81 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~g--g~~~~~~~~~~~~~~~i~--~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~ 81 (202)
.++||||||+|||+|+.+ +| |+ ........+...... .......+.++...+. +...++++|+++|.
T Consensus 76 ~~~PilGIC~G~Qll~~~-~g~~G~-~~~l~~~~g~v~~~~~~~~~~~g~~~l~~~~~~-------~~~~v~~~H~~~v~ 146 (201)
T 1gpw_B 76 DERYVVGVCLGMQLLFEE-SEEAPG-VKGLSLIEGNVVKLRSRRLPHMGWNEVIFKDTF-------PNGYYYFVHTYRAV 146 (201)
T ss_dssp TTCEEEEETHHHHTTSSE-ETTEEE-EECCCSSSEEEEECCCSSCSEEEEEEEEESSSS-------CCEEEEEEESEEEE
T ss_pred cCCeEEEEChhHHHHHHh-hccCCC-CCCcceeeeEEEEcCCCCCCcccceeeEeccCC-------CCCeEEEECcceec
Confidence 468999999999999999 86 33 111111111111000 0000000223322221 12457999999997
Q ss_pred ecccccccCCCcceEeeeeecCCC-ceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 82 RATMNSTKLSDAWDILTESKAGNG-KKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 82 ~~~~~~~~L~~~~~vla~s~~~~~-~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
+ + +++++|++ +.+| . +++++.++ +++|+|||||++
T Consensus 147 ~-------~--~~~vla~s-~~~g~~--~~a~~~~~-~i~gvQfHPE~~ 182 (201)
T 1gpw_B 147 C-------E--EEHVLGTT-EYDGEI--FPSAVRKG-RILGFQFHPEKS 182 (201)
T ss_dssp E-------C--GGGEEEEE-EETTEE--EEEEEEET-TEEEESSCGGGS
T ss_pred c-------C--CCEEEEEE-ccCCce--EEEEEECC-CEEEEECCCccc
Confidence 3 4 68999997 3334 4 78888765 899999999997
No 24
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=99.67 E-value=6.1e-17 Score=144.86 Aligned_cols=141 Identities=19% Similarity=0.246 Sum_probs=79.7
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCC---c--cceeeee-eEecc-----CCCccccc-----cC-ChhHHHHhhh
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCN---C--FHENLSL-RFLKN-----GSKTGLYK-----TF-PKKSLKALAK 68 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~---~--~~~~~~i-~~~~~-----~~~s~lf~-----~~-~~~~~~~~~~ 68 (202)
.++|+||||+|||+|+.+ +||++...... . .+...|+ ..... ...+.|+- .+ +..+...+-.
T Consensus 383 ~~iPiLGICLGmQlL~~a-~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~s~l~~iy~ 461 (550)
T 1vco_A 383 RKIPYLGICLGLQIAVIE-FARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPGTLLHRLYG 461 (550)
T ss_dssp TTCCEEEETHHHHHHHHH-HHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTTSHHHHHHC
T ss_pred CCCcEEEECcCHHHHHHH-hCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccCchhhHhcC
Confidence 469999999999999999 99876432110 0 1111222 11110 00112210 01 2222322221
Q ss_pred cce--eeeeeeeeEeecccccccCC-CcceEeeeeecCCC--ceeEEEEeecCCCEE-EEeeeCCccCcccccccCCCCC
Q psy15935 69 NNI--TYNYHIWCITRATMNSTKLS-DAWDILTESKAGNG--KKFVSTVQSKKYPFV-GIQFHPEKNSYEWNTVAHVNHS 142 (202)
Q Consensus 69 ~~~--~~~~H~~~v~~~~~~~~~L~-~~~~vla~s~~~~~--~~~v~~i~~~~~pi~-gvQfHPE~~~~e~~~~~~~~h~ 142 (202)
... ..+.|.|.|.+...+ .++ ++++++|++.+.++ ..+|++++++++|++ |+|||||+...+.. +
T Consensus 462 ~~~v~e~h~H~Y~Vns~~~~--~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQFHPE~~~~p~~-----g-- 532 (550)
T 1vco_A 462 KEEVLERHRHRYEVNPLYVD--GLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMR-----P-- 532 (550)
T ss_dssp CSEEEEEEEESEEECHHHHH--HHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTB-----C--
T ss_pred CceeeeeccceEEEchHHhh--ccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEeCCccCCCCCC-----h--
Confidence 222 367888888654221 255 78999999732100 224999999999987 99999999765421 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhC
Q psy15935 143 RIAIETSRLFYDWIVTEASKN 163 (202)
Q Consensus 143 ~~~~~~~~~~~~~f~~~ar~~ 163 (202)
..+.+.|++.|+++
T Consensus 533 -------~~LF~~Fv~aa~~~ 546 (550)
T 1vco_A 533 -------SPPFVGFVEAALAY 546 (550)
T ss_dssp -------CHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHhh
Confidence 23555666667654
No 25
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=99.66 E-value=2.1e-17 Score=147.71 Aligned_cols=137 Identities=15% Similarity=0.268 Sum_probs=78.5
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCC---c--cceeeee-eEe----------cc-----CCCccc----cc-c-C
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCN---C--FHENLSL-RFL----------KN-----GSKTGL----YK-T-F 58 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~---~--~~~~~~i-~~~----------~~-----~~~s~l----f~-~-~ 58 (202)
.++||||||+|||+|+.+ +||++...... . .+...|+ .+. .. ...+.| +. . .
T Consensus 371 ~~~PiLGIClG~Qll~va-~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~ 449 (545)
T 1s1m_A 371 NNIPYLGICLGMQVALID-YARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLV 449 (545)
T ss_dssp TTCCEEEETHHHHHHHHH-HHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEEC
T ss_pred CCCcEEEECChHHHHHHH-hCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEec
Confidence 468999999999999999 99986532111 0 1112222 111 00 000000 00 0 0
Q ss_pred ChhHHHH-hhhc-ceeeeeeeeeEeecccccccC-CCcceEeeeeecCCCceeEEEEeecCCCEE-EEeeeCCccCcccc
Q psy15935 59 PKKSLKA-LAKN-NITYNYHIWCITRATMNSTKL-SDAWDILTESKAGNGKKFVSTVQSKKYPFV-GIQFHPEKNSYEWN 134 (202)
Q Consensus 59 ~~~~~~~-~~~~-~~~~~~H~~~v~~~~~~~~~L-~~~~~vla~s~~~~~~~~v~~i~~~~~pi~-gvQfHPE~~~~e~~ 134 (202)
+...... +.+. ....+.|++.|.+...+ .+ +++++++|+| .+++. |++++++++|++ |+|||||+...+..
T Consensus 450 ~~s~l~~iyg~~~v~e~h~Hry~VNs~~~~--~l~~~gl~v~a~s-~dg~~--VEaie~~~~p~flGVQFHPE~~~~p~~ 524 (545)
T 1s1m_A 450 DDSLVRQLYNAPTIVERHRHRYEVNNMLLK--QIEDAGLRVAGRS-GDDQL--VEIIEVPNHPWFVACQFHPEFTSTPRD 524 (545)
T ss_dssp TTCHHHHHTTSSEEEEEEEECCEECHHHHH--HHHHTTCEEEEEC-SSSCC--EEEEECTTSSSEEEESSCGGGTCCTTT
T ss_pred cCCHHHHhcCCceEEEecCcceEEChHHhh--hcccCCeEEEEEC-CCCCc--eEEEEeCCCCEEEEEeCCCCCCCCCCC
Confidence 1122221 1111 13467888888754322 24 4899999997 34335 999999999976 99999999765431
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy15935 135 TVAHVNHSRIAIETSRLFYDWIVTEASK 162 (202)
Q Consensus 135 ~~~~~~h~~~~~~~~~~~~~~f~~~ar~ 162 (202)
+..+.+.|++.|++
T Consensus 525 --------------g~~LF~~Fv~aa~~ 538 (545)
T 1s1m_A 525 --------------GHPLFAGFVKAASE 538 (545)
T ss_dssp --------------CCHHHHHHHHHHHH
T ss_pred --------------hHHHHHHHHHHHHH
Confidence 13455666666654
No 26
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=99.64 E-value=5.1e-17 Score=143.65 Aligned_cols=135 Identities=20% Similarity=0.222 Sum_probs=77.2
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeec-cccC-----Cccceeeee-eEeccCC-----Ccccc------ccCChhHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFVENKEKEL-RTDC-----NCFHENLSL-RFLKNGS-----KTGLY------KTFPKKSLKALA 67 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~-~~~~-----~~~~~~~~i-~~~~~~~-----~s~lf------~~~~~~~~~~~~ 67 (202)
.++|+||||+|||+|+.+ +||++. .... +.+. ..|+ ...+... ...+- .-.+.+....+-
T Consensus 378 ~~~PiLGIClG~Qll~va-~Gg~v~g~qda~s~Ef~~~~-~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~gS~L~~iy 455 (535)
T 3nva_A 378 HNIPFLGICFGFQLSIVE-FARDVLGLSEANSTEINPNT-KDPVITLLDEQKNVTQLGGTMRLGAQKIILKEGTIAYQLY 455 (535)
T ss_dssp HTCCEEEETHHHHHHHHH-HHHTTTCCTTCEETTTCTTC-SCEEEECBCSSSCBCSSCCCCEEEEEEEEECTTSHHHHHH
T ss_pred cCCcEEEECcchhHHHHH-hhccccCccCCcccccCCCC-CCCeeecchhcccccccCCccccCceEEEEcCCCcHHHHh
Confidence 478999999999999999 999863 1111 1000 1111 1110000 00000 001222222211
Q ss_pred hcc--eeeeeeeeeEeecccccccC-CCcceEeeeeecCCCceeEEEEeecCCC-EEEEeeeCCccCcccccccCCCCCH
Q psy15935 68 KNN--ITYNYHIWCITRATMNSTKL-SDAWDILTESKAGNGKKFVSTVQSKKYP-FVGIQFHPEKNSYEWNTVAHVNHSR 143 (202)
Q Consensus 68 ~~~--~~~~~H~~~v~~~~~~~~~L-~~~~~vla~s~~~~~~~~v~~i~~~~~p-i~gvQfHPE~~~~e~~~~~~~~h~~ 143 (202)
... ...+.|++.|.+..-+ .+ +++++++|++ .+|. |++++++++| ++|+|||||+...+.. +
T Consensus 456 G~~~I~erHrHryeVNs~h~q--~l~~~GL~vsA~s--~DG~--IEAIE~~~~pf~vGVQfHPE~~~~p~~-----~--- 521 (535)
T 3nva_A 456 GKKVVYERHRHRYEVNPKYVD--ILEDAGLVVSGIS--ENGL--VEIIELPSNKFFVATQAHPEFKSRPTN-----P--- 521 (535)
T ss_dssp TSSEEEEEEEECCEECHHHHH--HHHHTTCEEEEEC--TTCC--EEEEECTTSSCEEEESSCGGGGCCSSS-----C---
T ss_pred CCCeeeecccccceechHHHh--hcccCCeEEEEEe--CCCC--EEEEEeCCCCcEEEEEeCCEecCCCCC-----h---
Confidence 122 2346678888753222 23 6899999996 5676 9999999999 6999999998754321 1
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy15935 144 IAIETSRLFYDWIVTEASK 162 (202)
Q Consensus 144 ~~~~~~~~~~~~f~~~ar~ 162 (202)
..+...|+++|++
T Consensus 522 ------~~LF~~Fv~Aa~~ 534 (535)
T 3nva_A 522 ------SPIYLGFIRAVAS 534 (535)
T ss_dssp ------CHHHHHHHHHHTC
T ss_pred ------hHHHHHHHHHHHh
Confidence 2356667777753
No 27
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.64 E-value=9.9e-17 Score=125.36 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=60.5
Q ss_pred ccEEeEcHHHHHHHhhhcCC-eeccccCCccceeeeeeEeccC--CC------ccccccCChhHHHHhhhcceeeeeeee
Q psy15935 8 FPILGICLGFELLLFVENKE-KELRTDCNCFHENLSLRFLKNG--SK------TGLYKTFPKKSLKALAKNNITYNYHIW 78 (202)
Q Consensus 8 ~PilGIC~G~QlL~~~~~gg-~~~~~~~~~~~~~~~i~~~~~~--~~------s~lf~~~~~~~~~~~~~~~~~~~~H~~ 78 (202)
+||||||+|||+|+.+ +|| ++... -+ ..+....... .. +..+..+ +...++++|++
T Consensus 75 ~PilGiC~G~Q~l~~~-~gg~~~~~~----lg-~~~~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~Hs~ 139 (191)
T 2ywd_A 75 LALFGTCAGAIWLAKE-IVGYPEQPR----LG-VLEAWVERNAFGRQVESFEEDLEVEGL---------GSFHGVFIRAP 139 (191)
T ss_dssp CEEEEETHHHHHHEEE-ETTCTTCCC----CC-CEEEEEETTCSCCSSSEEEEEEEETTT---------EEEEEEEESCC
T ss_pred CeEEEECHHHHHHHHH-hCCCCCCcc----cc-ccceEEEcCCcCCccccccccccccCC---------CceeEEEEccc
Confidence 8999999999999999 998 43211 11 1111111100 00 1112221 12345789999
Q ss_pred eEeecccccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 79 CITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 79 ~v~~~~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
.+. .+|++++++|++ + +. +++++++ +++|+|||||++
T Consensus 140 ~v~-------~l~~~~~~~a~~-~--~~--~~a~~~~--~~~gvQfHPE~~ 176 (191)
T 2ywd_A 140 VFR-------RLGEGVEVLARL-G--DL--PVLVRQG--KVLASSFHPELT 176 (191)
T ss_dssp EEE-------EECTTCEEEEEE-T--TE--EEEEEET--TEEEESSCGGGS
T ss_pred cee-------ccCCCcEEEEEE-C--CE--EEEEEEC--CEEEEEeCCCCC
Confidence 886 378899999996 3 44 8999984 599999999975
No 28
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.63 E-value=5.9e-16 Score=121.62 Aligned_cols=96 Identities=21% Similarity=0.273 Sum_probs=60.9
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEecc--CC------CccccccCChhHHHHhhhcceeeeeee
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKN--GS------KTGLYKTFPKKSLKALAKNNITYNYHI 77 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~--~~------~s~lf~~~~~~~~~~~~~~~~~~~~H~ 77 (202)
.++||||||+|+|+|+.+ +||++.... + ..|+..+.. .. .+.++.+++. ...++.+|+
T Consensus 71 ~~~pilgIC~G~q~l~~~-~gg~~~~~l----g-~~~~~~~~~~~g~~~~~~~~~~~~~~~g~--------~~~~~~~h~ 136 (196)
T 2nv0_A 71 QGKPMFGTCAGLIILAKE-IAGSDNPHL----G-LLNVVVERNSFGRQVDSFEADLTIKGLDE--------PFTGVFIRA 136 (196)
T ss_dssp TTCCEEEETHHHHHHSBC-CC----CCC----C-CSCEEEECCCSCTTTSEEEEEECCTTCSS--------CEEEEEESC
T ss_pred CCCcEEEECHHHHHHHHH-hcCCCCCcc----c-CCceeEeccCCCcccccccCCcccccCCC--------ceEEEEEec
Confidence 468999999999999999 998753211 1 111211110 00 1123333322 234578899
Q ss_pred eeEeecccccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 78 WCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 78 ~~v~~~~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
+.+. .+|++++++|.+ ++. +++++. .+++|+|||||++
T Consensus 137 ~~v~-------~~~~~~~v~a~~---d~~--~~a~~~--~~~~gvQfHPE~~ 174 (196)
T 2nv0_A 137 PHIL-------EAGENVEVLSEH---NGR--IVAAKQ--GQFLGCSFHPELT 174 (196)
T ss_dssp CEEE-------EECTTCEEEEEE---TTE--EEEEEE--TTEEEESSCTTSS
T ss_pred ceec-------ccCCCcEEEEEE---CCE--EEEEEE--CCEEEEEECCccC
Confidence 8886 378899999996 354 788887 5799999999985
No 29
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.62 E-value=3.3e-16 Score=123.55 Aligned_cols=97 Identities=21% Similarity=0.279 Sum_probs=57.2
Q ss_pred CcccEEeEcHHHHHHHhhh--cCC---------eecccc--CCccceeeeeeEeccCCCccccccCChhHHHHhhhccee
Q psy15935 6 DYFPILGICLGFELLLFVE--NKE---------KELRTD--CNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNIT 72 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~--~gg---------~~~~~~--~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~ 72 (202)
.++||||||+|||+|+.++ +|| ++.+.. ...+....++.++. + |.+++. ..+
T Consensus 74 ~~~PilGIC~G~Qll~~~~~~~Gg~~~l~~~~g~v~~~~~~~~~~~G~~~v~~~~----~--l~~~~~---------~~~ 138 (200)
T 1ka9_H 74 RGLPFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVPQMGWNALEFGG----A--FAPLTG---------RHF 138 (200)
T ss_dssp TTCCEEECTHHHHTTSSEETTSTTCCCCCSSSSEEEECCSSSSSEEEEEECEECG----G--GGGGTT---------CEE
T ss_pred cCCeEEEEcHHHHHHHHhccccCCcCCccccccEEEECCCCCCCceeEEEEEech----h--hhcCCC---------CCE
Confidence 4689999999999999983 263 332221 00111122333321 2 444432 346
Q ss_pred eeeeeeeEeecccccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccC
Q psy15935 73 YNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNS 130 (202)
Q Consensus 73 ~~~H~~~v~~~~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~ 130 (202)
+++|++++ + ++++ .+ |++ +++|.+ ++++.+++ +++|+|||||++.
T Consensus 139 ~~~Hs~~~-~-------~~~~-~v-a~s-~~~g~~-~~~~~~~~-~i~gvQfHPE~~~ 183 (200)
T 1ka9_H 139 YFANSYYG-P-------LTPY-SL-GKG-EYEGTP-FTALLAKE-NLLAPQFHPEKSG 183 (200)
T ss_dssp EEEESEEC-C-------CCTT-CC-EEE-EETTEE-EEEEEECS-SEEEESSCTTSSH
T ss_pred EEeccccc-C-------CCCC-cE-EEE-EeCCeE-EEEEEeeC-CEEEEecCCCcCc
Confidence 89999999 5 2333 56 876 332533 44444444 8999999999973
No 30
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.59 E-value=4.6e-16 Score=124.56 Aligned_cols=96 Identities=21% Similarity=0.266 Sum_probs=62.8
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEecc--CC------CccccccCChhHHHHhhhcceeeeeee
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKN--GS------KTGLYKTFPKKSLKALAKNNITYNYHI 77 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~--~~------~s~lf~~~~~~~~~~~~~~~~~~~~H~ 77 (202)
.++||||||+|+|+|+.+ +||++... -+. .+...... .. .+..+.+++. ...++.+|+
T Consensus 93 ~~~PilGIC~G~QlL~~~-~gg~~~~~----lg~-~~~~~~~~~~g~~~~~~~~~~~~~g~g~--------~~~~~~~h~ 158 (219)
T 1q7r_A 93 AGKPMFGTCAGLILLAKR-IVGYDEPH----LGL-MDITVERNSFGRQRESFEAELSIKGVGD--------GFVGVFIRA 158 (219)
T ss_dssp TTCCEEEETTHHHHHEEE-EESSCCCC----CCC-EEEEEECHHHHCCCCCEEEEEEETTTEE--------EEEEEESSC
T ss_pred cCCeEEEECHHHHHHHHH-hCCCCcCC----cCc-cceEEEecCCCccccceecCcccCCCCC--------ceEEEEEec
Confidence 468999999999999999 99875321 111 11111100 00 0112222321 234577898
Q ss_pred eeEeecccccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 78 WCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 78 ~~v~~~~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
+.+. .+|++++++|.+ ++. +++++. .+++|+|||||+.
T Consensus 159 ~~v~-------~l~~~~~v~a~s---dg~--~ea~~~--~~i~GvQfHPE~~ 196 (219)
T 1q7r_A 159 PHIV-------EAGDGVDVLATY---NDR--IVAARQ--GQFLGCSFHPELT 196 (219)
T ss_dssp CEEE-------EECTTCEEEEEE---TTE--EEEEEE--TTEEEESSCGGGS
T ss_pred ceee-------ccCCCcEEEEEc---CCE--EEEEEE--CCEEEEEECcccC
Confidence 8886 478899999996 355 899998 4799999999986
No 31
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.57 E-value=2.6e-15 Score=120.63 Aligned_cols=105 Identities=22% Similarity=0.212 Sum_probs=61.8
Q ss_pred cccEEeEcHHHHHHHhhhcCCeecccc---CCccceeeeeeEeccC---C-----CccccccCChhHHHHhhhcceeeee
Q psy15935 7 YFPILGICLGFELLLFVENKEKELRTD---CNCFHENLSLRFLKNG---S-----KTGLYKTFPKKSLKALAKNNITYNY 75 (202)
Q Consensus 7 ~~PilGIC~G~QlL~~~~~gg~~~~~~---~~~~~~~~~i~~~~~~---~-----~s~lf~~~~~~~~~~~~~~~~~~~~ 75 (202)
++||||||+|||+|+.+ +||++.... ....|. .++...... . ....+..+.. .-.+.-..+..
T Consensus 80 g~PilGIC~G~QlL~~~-~gg~~~~~~~~~~~~lG~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~g~~~~~~~~ 153 (227)
T 2abw_A 80 KKPIWGTCAGCILLSKN-VENIKLYSNFGNKFSFGG-LDITICRNFYGSQNDSFICSLNIISDSS----AFKKDLTAACI 153 (227)
T ss_dssp CCCEEEETHHHHHTEEE-EECCCSCCTTGGGSCCCC-EEEEEECCC----CCEEEEECEECCCCT----TCCTTCEEEEE
T ss_pred CCEEEEECHHHHHHHHH-hcCCccccccccccccCc-eeEEEEecCCCccccccccccccccccc----cCCCceeEEEE
Confidence 68999999999999999 998752221 222221 222221110 0 0011111100 00011234667
Q ss_pred eeeeEeecccccccC-CCcceEeeeeecC----CCceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 76 HIWCITRATMNSTKL-SDAWDILTESKAG----NGKKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 76 H~~~v~~~~~~~~~L-~~~~~vla~s~~~----~~~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
|++.|. .+ |++++++|++ +. ++. +++++. .+++|+|||||++
T Consensus 154 h~~~v~-------~~~~~~~~vla~~-~~~~~g~~~--~~a~~~--~~v~gvQfHPE~~ 200 (227)
T 2abw_A 154 RAPYIR-------EILSDEVKVLATF-SHESYGPNI--IAAVEQ--NNCLGTVFHPELL 200 (227)
T ss_dssp SCCEEE-------EECCTTCEEEEEE-EETTTEEEE--EEEEEE--TTEEEESSCGGGS
T ss_pred EcceEe-------ecCCCCcEEEEEc-ccccCCCCc--eEEEEE--CCEEEEEECCeeC
Confidence 887776 35 8899999997 32 333 788886 5799999999986
No 32
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.56 E-value=1.5e-15 Score=136.76 Aligned_cols=102 Identities=23% Similarity=0.233 Sum_probs=67.2
Q ss_pred CcccEEeEcHHHHHHHhhhc------------CCeeccccC-----CccceeeeeeEeccCCCccccccCChhHHHHhhh
Q psy15935 6 DYFPILGICLGFELLLFVEN------------KEKELRTDC-----NCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAK 68 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~------------gg~~~~~~~-----~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~ 68 (202)
.++||||||+|||+|+.+ + ||++.+... +.+| ..++.. . ++||..++..
T Consensus 78 ~g~PiLGIC~G~QlL~~a-~~egg~~~~Lg~lgg~v~~~~~~~~~~~~~G-~~~v~~----~-~~L~~~l~~~------- 143 (555)
T 1jvn_A 78 SGKPIMGIXVGLQALFAG-SVESPKSTGLNYIDFKLSRFDDSEKPVPEIG-WNSCIP----S-ENLFFGLDPY------- 143 (555)
T ss_dssp TTCCEEEEEHHHHTTEEE-ETTBTTCCCCCSEEEEEEECCTTTSCSSEEE-EECCCC----C-TTCCTTCCTT-------
T ss_pred cCCcEEEEchhhhhhhhh-hhcCCCccccCCCCcEEEECCcCCCCCcccc-ceEEEE----c-CHHHhhCCCC-------
Confidence 468999999999999998 6 444432210 1111 122221 2 6788887653
Q ss_pred cceeeeeeeeeEeeccccccc----CCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCcc
Q psy15935 69 NNITYNYHIWCITRATMNSTK----LSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKN 129 (202)
Q Consensus 69 ~~~~~~~H~~~v~~~~~~~~~----L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~ 129 (202)
..++++|++++.... . |++++.++|++ +.+...++++++. .+++|+|||||++
T Consensus 144 -~~~~~vHS~~~~~i~----~~~~~L~~g~~vlA~s-~~~~D~~i~ai~~--~~i~GvQFHPE~s 200 (555)
T 1jvn_A 144 -KRYYFVHSFAAILNS----EKKKNLENDGWKIAKA-KYGSEEFIAAVNK--NNIFATQFHPEKS 200 (555)
T ss_dssp -SCEEEEESEECBCCH----HHHHHHHHTTCEEEEE-EETTEEEEEEEEE--TTEEEESSBGGGS
T ss_pred -ceEEEEEEEEEEecc----cccccCCCCCEEEEEE-cCCCCCeEEEEEe--CCEEEEEeCcEec
Confidence 235889999886421 1 25778899987 3321245999995 6899999999975
No 33
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.55 E-value=3.8e-15 Score=118.28 Aligned_cols=98 Identities=17% Similarity=0.131 Sum_probs=61.2
Q ss_pred CcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccC--C------CccccccCChhHHHHhhhcceeeeeee
Q psy15935 6 DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNG--S------KTGLYKTFPKKSLKALAKNNITYNYHI 77 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~--~------~s~lf~~~~~~~~~~~~~~~~~~~~H~ 77 (202)
.++||||||+|+|+|+.+ +||.... .-+ ..|....... . .+..+.+++. +...++.+|+
T Consensus 90 ~g~PilGIC~G~QlL~~~-~gg~~~~----~lg-~~~~~v~~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~h~ 156 (208)
T 2iss_D 90 NGLPVFATCAGVILLAKR-IKNYSQE----KLG-VLDITVERNAYGRQVESFETFVEIPAVGK-------DPFRAIFIRA 156 (208)
T ss_dssp TTCCEEEETHHHHHHEEE-EC---CC----CCC-CEEEEEETTTTCSGGGCEEEEECCGGGCS-------SCEEEEESSC
T ss_pred CCCeEEEECHHHHHHHHH-cCCCCCC----Ccc-ccceEEEecCCCcccccccCCcccccCCC-------CceEEEEEeC
Confidence 468999999999999999 9985321 111 1222221110 0 1122222221 1235677888
Q ss_pred eeEeecccccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccC
Q psy15935 78 WCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNS 130 (202)
Q Consensus 78 ~~v~~~~~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~ 130 (202)
+.+. .+|++++++|.+ + +. +++++. .+++|+|||||+..
T Consensus 157 ~~v~-------~~~~~~~v~a~~-d--~~--~~a~~~--~~i~GvQfHPE~~~ 195 (208)
T 2iss_D 157 PRIV-------ETGKNVEILATY-D--YD--PVLVKE--GNILACTFHPELTD 195 (208)
T ss_dssp CEEE-------EECSSCEEEEEE-T--TE--EEEEEE--TTEEEESSCGGGSS
T ss_pred cccc-------cCCCCcEEEEEE-C--CE--EEEEEE--CCEEEEEeCCCcCC
Confidence 8887 367889999986 3 54 899987 47999999999863
No 34
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.49 E-value=1.7e-14 Score=120.87 Aligned_cols=106 Identities=17% Similarity=0.155 Sum_probs=70.5
Q ss_pred CcccEEeEcHHHHHHHhhhcCCee-ccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeecc
Q psy15935 6 DYFPILGICLGFELLLFVENKEKE-LRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRAT 84 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~~-~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~ 84 (202)
..+|+||||+|+|+++.+ +||.. ........| ..++.++. .++|+.+++..+. +.++|...+..+.
T Consensus 146 ~~~p~LGIC~GaQ~~l~~-~~G~~k~~~~~K~~G-v~~~~~~~---~~pL~~g~~~~f~--------vphsr~~e~~~~~ 212 (312)
T 2h2w_A 146 NVYSTMFICWAAQAGLYY-FYGIPKYELPQKLSG-VYKHRVAK---DSVLFRGHDDFFW--------APHSRYTEVKKED 212 (312)
T ss_dssp HEEEEEEETHHHHHHHHH-HHCCCCEEEEEEEEE-EEEEEESS---CCGGGTTCCSEEE--------EEEEEEEECCHHH
T ss_pred cCCcEEEECHHHHHHHHH-hCCCccccCCCCEEE-EEEEEEcC---CCccccCCCCceE--------eeEEeccccCHHH
Confidence 368999999999998877 66632 222222233 34555553 6789988876543 3454443433222
Q ss_pred cccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCc
Q psy15935 85 MNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSY 131 (202)
Q Consensus 85 ~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~ 131 (202)
. ..++++++||.| +.++ +++++.++..++|+|+|||++..
T Consensus 213 v---~~~pga~vLA~S-~~~~---~q~~~~~~~~~~~vQgHPEyd~~ 252 (312)
T 2h2w_A 213 I---DKVPELEILAES-DEAG---VYVVANKSERQIFVTGHPEYDRY 252 (312)
T ss_dssp H---TTCC-CEEEEEE-TTTE---EEEEECSSSSEEEECSCTTCCTT
T ss_pred c---cCCCCCEEEEcC-CCCc---ceEEEecCCCEEEEECCCCCCHH
Confidence 1 122589999998 7788 78888877789999999999753
No 35
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.48 E-value=1.8e-14 Score=120.44 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=70.6
Q ss_pred CcccEEeEcHHHHHHHhhhcCCe-eccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeecc
Q psy15935 6 DYFPILGICLGFELLLFVENKEK-ELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRAT 84 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~gg~-~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~~ 84 (202)
..+|+||||+|+|+++.+ +||. .........| ..++..+ ...++|+.+++..+. +.++|.-.+..+.
T Consensus 134 ~~~~~lgIC~GaQ~~l~~-~~G~~k~~~~~K~~G-v~~~~~~--~~~~pL~~g~~~~f~--------~phsr~~~~~~~~ 201 (301)
T 2vdj_A 134 NVTSTLHICWGAQAGLYH-HYGVQKYPLKEKMFG-VFEHEVR--EQHVKLLQGFDELFF--------AVHSRHTEVRESD 201 (301)
T ss_dssp HEEEEEEETHHHHHHHHH-HHCCCCEEEEEEEEE-EEEEEEC--CSSCGGGTTCCSEEE--------EEEEEEEECCHHH
T ss_pred cCCcEEEEcHHHHHHHHH-hCCCccccCCCCEEE-EEEEEec--CCCCccccCCCCceE--------eeeEeccCcCHHH
Confidence 368999999999998777 6663 2222222233 3445544 256789988876543 2444432332221
Q ss_pred cccccCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCc
Q psy15935 85 MNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSY 131 (202)
Q Consensus 85 ~~~~~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~ 131 (202)
.. .+| ++++||.| +.++ +.++..++..++|+|+|||++..
T Consensus 202 v~--~~p-ga~vLA~S-~~~~---~~~~~~~~~~~~~vQgHpEyd~~ 241 (301)
T 2vdj_A 202 IR--EVK-ELTLLANS-EEAG---VHLVIGQEGRQVFALGHSEYSCD 241 (301)
T ss_dssp HH--TCT-TEEEEEEE-TTTE---EEEEEEGGGTEEEECSCTTCCTT
T ss_pred cc--CCC-CCEEEEeC-CCCc---ceEEEecCCCEEEEECCCCCCHH
Confidence 11 344 99999998 7788 78888766789999999999753
No 36
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.31 E-value=3e-06 Score=82.54 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=23.4
Q ss_pred EEEEeecCCCEEEEeeeCCccCcccc
Q psy15935 109 VSTVQSKKYPFVGIQFHPEKNSYEWN 134 (202)
Q Consensus 109 v~~i~~~~~pi~gvQfHPE~~~~e~~ 134 (202)
|++|...+++++|++.||||....|.
T Consensus 1252 IaGi~s~~Grvlg~MpHPEr~~~~~~ 1277 (1303)
T 3ugj_A 1252 ITAVTTENGRVTIMMPHPERVFRTVA 1277 (1303)
T ss_dssp EEEEECTTSSEEEESSBGGGSSBGGG
T ss_pred ceEeECCCCCEEEEcCChHHcccccc
Confidence 99999999999999999999876663
No 37
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=92.36 E-value=0.044 Score=43.39 Aligned_cols=17 Identities=18% Similarity=0.000 Sum_probs=15.8
Q ss_pred cccEEeEcHHHHHHHhh
Q psy15935 7 YFPILGICLGFELLLFV 23 (202)
Q Consensus 7 ~~PilGIC~G~QlL~~~ 23 (202)
.+|++|||.|+|+|+..
T Consensus 113 G~p~~G~sAG~~~l~~~ 129 (229)
T 1fy2_A 113 GALYIGWSAGANLACPT 129 (229)
T ss_dssp TCEEEEETHHHHHTSSB
T ss_pred CCEEEEECHHHHhhccc
Confidence 58999999999999986
No 38
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=91.55 E-value=0.05 Score=42.43 Aligned_cols=17 Identities=12% Similarity=-0.172 Sum_probs=15.3
Q ss_pred cccEEeEcHHHHHHHhh
Q psy15935 7 YFPILGICLGFELLLFV 23 (202)
Q Consensus 7 ~~PilGIC~G~QlL~~~ 23 (202)
++|++|||.|+|+|+..
T Consensus 113 G~p~~G~sAGa~~l~~~ 129 (206)
T 3l4e_A 113 GKLYIGESAGAVITSPN 129 (206)
T ss_dssp TCEEEEETHHHHTTSSB
T ss_pred CCeEEEECHHHHHhccc
Confidence 58999999999999864
No 39
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=80.52 E-value=0.71 Score=34.99 Aligned_cols=18 Identities=33% Similarity=0.604 Sum_probs=16.3
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.|||.|.++|+.+
T Consensus 117 ~gk~i~aIC~G~~lLa~a 134 (193)
T 1oi4_A 117 SGKPVFAICHGPQLLISA 134 (193)
T ss_dssp TTCCEEEETTTHHHHHHH
T ss_pred cCCEEEEECHHHHHHHHC
Confidence 468999999999999986
No 40
>1ehs_A STB, heat-stable enterotoxin B; disulfide; NMR {Escherichia coli} SCOP: g.2.1.1
Probab=72.68 E-value=0.74 Score=25.92 Aligned_cols=13 Identities=23% Similarity=0.751 Sum_probs=11.3
Q ss_pred EeEcHHHHHHHhh
Q psy15935 11 LGICLGFELLLFV 23 (202)
Q Consensus 11 lGIC~G~QlL~~~ 23 (202)
-|.|+|.|+|..+
T Consensus 33 agacfgaqimvaa 45 (48)
T 1ehs_A 33 AGACFGAQIMVAA 45 (48)
T ss_dssp CCTTTTTHHHHTT
T ss_pred cccccchhHhhhc
Confidence 4789999999876
No 41
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=61.12 E-value=3.9 Score=29.80 Aligned_cols=18 Identities=33% Similarity=0.621 Sum_probs=16.2
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|.++|+.+
T Consensus 94 ~~k~i~aiC~G~~~La~a 111 (168)
T 3l18_A 94 DDKPVASICHGPQILISA 111 (168)
T ss_dssp TTCCEEEETTTHHHHHHT
T ss_pred CCCEEEEECHhHHHHHHC
Confidence 468999999999999976
No 42
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=53.19 E-value=6.9 Score=28.64 Aligned_cols=18 Identities=22% Similarity=0.388 Sum_probs=15.9
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-++|+.+
T Consensus 103 ~gk~i~aiC~G~~~La~a 120 (175)
T 3cne_A 103 KGKMMIGHCAGAMMFDFT 120 (175)
T ss_dssp TTCEEEEETTHHHHHHHT
T ss_pred CCCEEEEECHHHHHHHHC
Confidence 457999999999999976
No 43
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=45.66 E-value=11 Score=27.82 Aligned_cols=18 Identities=22% Similarity=0.109 Sum_probs=16.1
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-.+|+.+
T Consensus 93 ~~k~i~aiC~G~~~La~a 110 (188)
T 2fex_A 93 RDRLVAGICAAASALGGT 110 (188)
T ss_dssp TTCEEEEETHHHHHHHHT
T ss_pred CCCEEEEECHHHHHHHHC
Confidence 467999999999999976
No 44
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=45.33 E-value=9.4 Score=28.56 Aligned_cols=18 Identities=33% Similarity=0.211 Sum_probs=16.1
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-++|+.+
T Consensus 98 ~gk~i~aiC~G~~~La~a 115 (197)
T 2rk3_A 98 RKGLIATICAGPTALLAH 115 (197)
T ss_dssp TTCEEEEETTTHHHHHHT
T ss_pred cCCEEEEECHHHHHHHHC
Confidence 467999999999999987
No 45
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=45.08 E-value=7.1 Score=30.22 Aligned_cols=22 Identities=14% Similarity=0.090 Sum_probs=18.6
Q ss_pred CcccEEeEcHHHHHHHhhhcC-Ce
Q psy15935 6 DYFPILGICLGFELLLFVENK-EK 28 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~~~g-g~ 28 (202)
..+||.+||-|-++|+.+ +. |+
T Consensus 132 ~gk~vaaIC~G~~~La~a-L~~Gr 154 (232)
T 1vhq_A 132 AGKPLGFMCIAPAMLPKI-FDFPL 154 (232)
T ss_dssp TTCCEEEETTGGGGHHHH-CSSCC
T ss_pred cCCEEEEECHHHHHHHHH-hcCCC
Confidence 467999999999999988 66 54
No 46
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=44.04 E-value=6.8 Score=29.05 Aligned_cols=18 Identities=33% Similarity=0.211 Sum_probs=15.2
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-++|+.+
T Consensus 107 ~gk~i~aiC~G~~~La~a 124 (190)
T 2vrn_A 107 AGKPIAAICHGPWSLSET 124 (190)
T ss_dssp TTCCEEEC-CTTHHHHHT
T ss_pred cCCEEEEECHhHHHHHhC
Confidence 468999999999999986
No 47
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=37.14 E-value=14 Score=27.83 Aligned_cols=18 Identities=17% Similarity=0.109 Sum_probs=15.8
Q ss_pred CcccEEeEcHHH-HHHHhh
Q psy15935 6 DYFPILGICLGF-ELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~-QlL~~~ 23 (202)
..+||.+||-|- ++|+.+
T Consensus 98 ~gk~i~aiC~G~~~lLa~a 116 (205)
T 2ab0_A 98 SGRIVAAICAAPATVLVPH 116 (205)
T ss_dssp TTCEEEEETHHHHHHTTTT
T ss_pred cCCEEEEECHhHHHHHHHC
Confidence 468999999999 999875
No 48
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=34.31 E-value=18 Score=26.78 Aligned_cols=18 Identities=22% Similarity=0.041 Sum_probs=16.0
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-.+|+.+
T Consensus 99 ~~k~i~aiC~G~~~La~a 116 (190)
T 4e08_A 99 GGGLIAAICAAPTVLAKH 116 (190)
T ss_dssp TTCEEEEETTTHHHHHHT
T ss_pred CCCEEEEECHHHHHHHHC
Confidence 468999999999999976
No 49
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=32.87 E-value=25 Score=26.68 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=16.1
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-.+|+.+
T Consensus 92 ~gk~iaaiC~G~~~La~a 109 (206)
T 3f5d_A 92 KNIPIAAICGAVDFLAKN 109 (206)
T ss_dssp TTCCEEEETHHHHHHHHT
T ss_pred cCCEEEEECHHHHHHHHc
Confidence 468999999999999986
No 50
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=32.74 E-value=22 Score=26.32 Aligned_cols=18 Identities=17% Similarity=0.172 Sum_probs=15.8
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-.+|+.+
T Consensus 100 ~~k~iaaIC~g~~~La~a 117 (177)
T 4hcj_A 100 NQKIVAGIGSGVVIMANA 117 (177)
T ss_dssp TTCEEEEETTHHHHHHHT
T ss_pred hCCEEEEecccHHHHHHC
Confidence 467999999999999876
No 51
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=30.09 E-value=26 Score=27.44 Aligned_cols=18 Identities=17% Similarity=0.388 Sum_probs=16.3
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-.+|+.+
T Consensus 150 ~gk~IaaIC~G~~~La~a 167 (242)
T 3l3b_A 150 AKKPIGAVCISPAVVVAL 167 (242)
T ss_dssp TTCCEEEETTHHHHHHHH
T ss_pred cCCEEEEECHHHHHHHHh
Confidence 468999999999999987
No 52
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=23.28 E-value=43 Score=25.29 Aligned_cols=18 Identities=17% Similarity=0.039 Sum_probs=15.8
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-.+|+.+
T Consensus 104 ~gk~iaaiC~G~~~La~a 121 (212)
T 3efe_A 104 IGTIVAAICGATDALANM 121 (212)
T ss_dssp HTCEEEEETHHHHHHHHT
T ss_pred CCCEEEEEcHHHHHHHHc
Confidence 357999999999999976
No 53
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=22.42 E-value=43 Score=25.23 Aligned_cols=18 Identities=17% Similarity=0.036 Sum_probs=16.0
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..++|.+||-|-.+|+.+
T Consensus 107 ~g~~iaaIC~G~~~La~a 124 (209)
T 3er6_A 107 KGSKIVAIDTGIFVVAKA 124 (209)
T ss_dssp TTCEEEEETTHHHHHHHH
T ss_pred cCCEEEEEcHHHHHHHHc
Confidence 468999999999999987
No 54
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=22.35 E-value=20 Score=27.21 Aligned_cols=18 Identities=28% Similarity=0.230 Sum_probs=15.9
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-.+|+.+
T Consensus 121 ~~k~iaaiC~G~~~La~a 138 (224)
T 1u9c_A 121 DGRIIAAVCHGPSGLVNA 138 (224)
T ss_dssp TTCEEEEETTGGGGGTTC
T ss_pred CCCEEEEEChHHHHHHHc
Confidence 467999999999999976
No 55
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=20.30 E-value=51 Score=27.38 Aligned_cols=18 Identities=28% Similarity=0.503 Sum_probs=16.2
Q ss_pred CcccEEeEcHHHHHHHhh
Q psy15935 6 DYFPILGICLGFELLLFV 23 (202)
Q Consensus 6 ~~~PilGIC~G~QlL~~~ 23 (202)
..+||.+||-|-++|+.+
T Consensus 313 ~~~~i~aiC~g~~~La~a 330 (396)
T 3uk7_A 313 SEKPVASICHGQQILAAA 330 (396)
T ss_dssp TTCCEEEEGGGHHHHHHT
T ss_pred CCCEEEEEchHHHHHHHc
Confidence 468999999999999986
Done!