BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15936
(665 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/430 (89%), Positives = 392/430 (91%), Gaps = 29/430 (6%)
Query: 236 NKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 295
N+M+++ A EGF+ YY+ KIEELQL+VAEK QNLRRLQAQRNELNAKVRMLREELQL
Sbjct: 5 NRMEIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQL 64
Query: 296 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 355
LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHK
Sbjct: 65 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHK 124
Query: 356 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 415
ILPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKG
Sbjct: 125 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 184
Query: 416 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 475
VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI
Sbjct: 185 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 244
Query: 476 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERR 535
IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 245 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNI---------------- 288
Query: 536 VHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKM 595
KVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDIL+IHSRKM
Sbjct: 289 -------------KVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 335
Query: 596 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 655
NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE
Sbjct: 336 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 395
Query: 656 KNMSIKKLWK 665
KNMSIKKLWK
Sbjct: 396 KNMSIKKLWK 405
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 115/123 (93%)
Query: 117 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQ 176
++ A EGF+ YY+ KIEELQL+VAEK QNLRRLQAQRNELNAKVRMLREELQLLQEQ
Sbjct: 9 IESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQ 68
Query: 177 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPN 236
GSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHKILPN
Sbjct: 69 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPN 128
Query: 237 KMD 239
K+D
Sbjct: 129 KVD 131
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/430 (89%), Positives = 391/430 (90%), Gaps = 31/430 (7%)
Query: 236 NKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 295
KM+VD EGF+PYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQL
Sbjct: 4 TKMEVDST--KGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQL 61
Query: 296 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 355
LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRNESYTLHK
Sbjct: 62 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHK 121
Query: 356 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 415
ILPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKG
Sbjct: 122 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 181
Query: 416 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 475
VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI
Sbjct: 182 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 241
Query: 476 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERR 535
IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 242 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNI---------------- 285
Query: 536 VHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKM 595
KVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDIL+IHSRKM
Sbjct: 286 -------------KVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 332
Query: 596 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 655
NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE
Sbjct: 333 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 392
Query: 656 KNMSIKKLWK 665
KNMSIKKLWK
Sbjct: 393 KNMSIKKLWK 402
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/116 (93%), Positives = 113/116 (97%)
Query: 124 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 183
EGF+PYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV
Sbjct: 13 GEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 72
Query: 184 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
VKPMDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRNESYTLHKILPNK+D
Sbjct: 73 VKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 128
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/431 (85%), Positives = 389/431 (90%), Gaps = 30/431 (6%)
Query: 235 PNKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 294
P +M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQ
Sbjct: 6 PEQMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQ 64
Query: 295 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 354
LLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLH
Sbjct: 65 LLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLH 124
Query: 355 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 414
KILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPK
Sbjct: 125 KILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
Query: 415 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 474
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPS
Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244
Query: 475 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRER 534
IIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI--------------- 289
Query: 535 RVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRK 594
KVIMATNRIDILD ALLRPGRIDRKIEFPPPNEEARLDIL+IHSRK
Sbjct: 290 --------------KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 595 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 654
MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 655 EKNMSIKKLWK 665
EKNMSIKKLWK
Sbjct: 396 EKNMSIKKLWK 406
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 111/118 (94%)
Query: 122 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 181
K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 15 KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 74
Query: 182 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNK+D
Sbjct: 75 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/431 (85%), Positives = 389/431 (90%), Gaps = 30/431 (6%)
Query: 235 PNKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 294
P +M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQ
Sbjct: 6 PEQMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQ 64
Query: 295 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 354
LLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLH
Sbjct: 65 LLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLH 124
Query: 355 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 414
KILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPK
Sbjct: 125 KILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
Query: 415 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 474
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPS
Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244
Query: 475 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRER 534
IIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI--------------- 289
Query: 535 RVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRK 594
KVIMATNRIDILD ALLRPGRIDRKIEFPPPNEEARLDIL+IHSRK
Sbjct: 290 --------------KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 595 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 654
MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 655 EKNMSIKKLWK 665
EKNMSIKKLWK
Sbjct: 396 EKNMSIKKLWK 406
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 111/118 (94%)
Query: 122 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 181
K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 15 KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 74
Query: 182 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNK+D
Sbjct: 75 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/431 (85%), Positives = 389/431 (90%), Gaps = 30/431 (6%)
Query: 235 PNKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 294
P +M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQ
Sbjct: 6 PEQMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQ 64
Query: 295 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 354
LLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLH
Sbjct: 65 LLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLH 124
Query: 355 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 414
KILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPK
Sbjct: 125 KILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
Query: 415 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 474
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPS
Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244
Query: 475 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRER 534
IIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI--------------- 289
Query: 535 RVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRK 594
KVIMATNRIDILD ALLRPGRIDRKIEFPPPNEEARLDIL+IHSRK
Sbjct: 290 --------------KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 595 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 654
MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 655 EKNMSIKKLWK 665
EKNMSIKKLWK
Sbjct: 396 EKNMSIKKLWK 406
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 111/118 (94%)
Query: 122 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 181
K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 15 KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 74
Query: 182 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNK+D
Sbjct: 75 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/431 (85%), Positives = 389/431 (90%), Gaps = 30/431 (6%)
Query: 235 PNKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 294
P +M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQ
Sbjct: 6 PEQMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQ 64
Query: 295 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 354
LLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLH
Sbjct: 65 LLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLH 124
Query: 355 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 414
KILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPK
Sbjct: 125 KILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
Query: 415 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 474
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPS
Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244
Query: 475 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRER 534
IIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI--------------- 289
Query: 535 RVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRK 594
KVIMATNRIDILD ALLRPGRIDRKIEFPPPNEEARLDIL+IHSRK
Sbjct: 290 --------------KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 595 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 654
MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 655 EKNMSIKKLWK 665
EKNMSIKKLWK
Sbjct: 396 EKNMSIKKLWK 406
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 111/118 (94%)
Query: 122 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 181
K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 15 KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 74
Query: 182 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNK+D
Sbjct: 75 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/431 (85%), Positives = 389/431 (90%), Gaps = 30/431 (6%)
Query: 235 PNKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 294
P +M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQ
Sbjct: 6 PEQMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQ 64
Query: 295 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 354
LLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLH
Sbjct: 65 LLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLH 124
Query: 355 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 414
KILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPK
Sbjct: 125 KILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
Query: 415 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 474
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPS
Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244
Query: 475 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRER 534
IIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI--------------- 289
Query: 535 RVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRK 594
KVIMATNRIDILD ALLRPGRIDRKIEFPPPNEEARLDIL+IHSRK
Sbjct: 290 --------------KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 595 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 654
MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 655 EKNMSIKKLWK 665
EKNMSIKKLWK
Sbjct: 396 EKNMSIKKLWK 406
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 111/118 (94%)
Query: 122 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 181
K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 15 KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 74
Query: 182 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNK+D
Sbjct: 75 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
>sp|P46470|PRS8_XENLA 26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2
SV=2
Length = 461
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/429 (85%), Positives = 386/429 (89%), Gaps = 31/429 (7%)
Query: 237 KMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 296
+M++DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELNAKVR+LREELQLL
Sbjct: 3 QMEMDES-RGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLL 61
Query: 297 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 356
QEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKI
Sbjct: 62 QEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKI 121
Query: 357 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 416
LPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPE F+ALGIAQPKGV
Sbjct: 122 LPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGV 181
Query: 417 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSII 476
LLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPSII
Sbjct: 182 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 241
Query: 477 FMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRV 536
FMDEIDSIG SR+E GSGGDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 242 FMDEIDSIG-SRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI----------------- 283
Query: 537 HVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMN 596
KVIMATNRIDILD ALLRPGRIDRKIEFPPPNEEARLDIL+IHSRKMN
Sbjct: 284 ------------KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN 331
Query: 597 LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEK 656
LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEK
Sbjct: 332 LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEK 391
Query: 657 NMSIKKLWK 665
NMSIKKLWK
Sbjct: 392 NMSIKKLWK 400
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 115/126 (91%), Gaps = 1/126 (0%)
Query: 114 QRTVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 173
Q +DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELNAKVR+LREELQLL
Sbjct: 3 QMEMDES-RGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLL 61
Query: 174 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 233
QEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKI
Sbjct: 62 QEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKI 121
Query: 234 LPNKMD 239
LPNK+D
Sbjct: 122 LPNKVD 127
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/424 (76%), Positives = 360/424 (84%), Gaps = 30/424 (7%)
Query: 243 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 302
A K EG K YY+ I ELQ + +K NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 303 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 362
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVD 144
Query: 363 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 422
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 423 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID 482
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDEID
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
Query: 483 SIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQE 541
SIGS+R+ESGSG GDSEVQRTMLELLNQLDGFEA+ I
Sbjct: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKI---------------------- 302
Query: 542 DFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGI 601
KV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+R DIL+IHSRKMNL RGI
Sbjct: 303 -------KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGI 355
Query: 602 NLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIK 661
+L+KIAE M GASGAE+K VCTEAGM+ALRERRVHVTQEDFEMAVAKVM+KD+EKNMS++
Sbjct: 356 DLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLR 415
Query: 662 KLWK 665
KLWK
Sbjct: 416 KLWK 419
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/120 (69%), Positives = 97/120 (80%)
Query: 120 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 179
A K EG K YY+ I ELQ + +K NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 180 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+K+D
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVD 144
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/424 (76%), Positives = 360/424 (84%), Gaps = 30/424 (7%)
Query: 243 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 302
A K EG YY+ ++ELQ + EK NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 303 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 362
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144
Query: 363 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 422
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 423 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID 482
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDEID
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
Query: 483 SIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQE 541
SIGS+R+ESGSG GDSEVQRTMLELLNQLDGFEA+ I
Sbjct: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKI---------------------- 302
Query: 542 DFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGI 601
KV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+R DIL+IHSRKMNL RGI
Sbjct: 303 -------KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGI 355
Query: 602 NLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIK 661
+L+KIAE M GASGAE+K VCTEAGM+ALRERRVHVTQEDFEMAVAKVM+KD+EKNMS++
Sbjct: 356 DLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLR 415
Query: 662 KLWK 665
KLWK
Sbjct: 416 KLWK 419
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 97/120 (80%)
Query: 120 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 179
A K EG YY+ ++ELQ + EK NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 180 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+K+D
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144
>sp|Q25544|PRS8_NAEFO 26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2
SV=1
Length = 414
Score = 621 bits (1602), Expect = e-177, Method: Compositional matrix adjust.
Identities = 311/418 (74%), Positives = 354/418 (84%), Gaps = 30/418 (7%)
Query: 249 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 308
G K YY+ KI+E ++++ +K +NLRRLQAQRNELN +VR L+EELQ LQE GS+VGEVVK
Sbjct: 26 GLKNYYIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVK 85
Query: 309 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 368
M KKKVL+K+ EGK++VDIDK+I++ D+TP RVALRN+SY LHKILPNK+DPLVSLM
Sbjct: 86 VMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLM 145
Query: 369 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 428
VEKVPD+TYEMVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGV++YGPPGTGKTL
Sbjct: 146 KVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTL 205
Query: 429 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 488
LARAVAHHT+CTFIRVSGSELVQK+IGEGS+MVRELFVMAREHAPSIIFMDEIDSIGS+R
Sbjct: 206 LARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTR 265
Query: 489 IESG-SGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAV 547
E G GGDSEVQRTMLELLNQLDGFE+T+NI
Sbjct: 266 TEGGKGGGDSEVQRTMLELLNQLDGFESTQNI---------------------------- 297
Query: 548 AKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIA 607
K+IMATNRIDILDPALLRPGRIDRKIEFP PNE ARLDIL+IHSR+MNLTRGINLRKIA
Sbjct: 298 -KIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIA 356
Query: 608 ELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 665
++ GASGAE+K CTEAGM+ALRERRVHVTQED EMAVAKVM++ E NMS KKL+K
Sbjct: 357 SMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMKRGDESNMSFKKLFK 414
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 96/114 (84%)
Query: 126 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 185
G K YY+ KI+E ++++ +K +NLRRLQAQRNELN +VR L+EELQ LQE GS+VGEVVK
Sbjct: 26 GLKNYYIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVK 85
Query: 186 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
M KKKVL+K+ EGK++VDIDK+I++ D+TP RVALRN+SY LHKILPNK+D
Sbjct: 86 VMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKID 139
>sp|P34124|PRS8_DICDI 26S protease regulatory subunit 8 OS=Dictyostelium discoideum
GN=psmC5 PE=1 SV=2
Length = 403
Score = 616 bits (1588), Expect = e-175, Method: Compositional matrix adjust.
Identities = 311/420 (74%), Positives = 349/420 (83%), Gaps = 30/420 (7%)
Query: 247 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 306
++G K YY +KIEEL++ V EK Q+LRRL+AQRNELN +VRML+EELQLL GS+V EV
Sbjct: 13 TKGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEV 72
Query: 307 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 366
VK M K KVLVKV+PEGKFVVDID +DI +TP+ R AL++ESYTLH+ILPNK+DPLVS
Sbjct: 73 VKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVS 132
Query: 367 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 426
LM VEK+PDSTY+MVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGK
Sbjct: 133 LMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 192
Query: 427 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG 485
TLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MAREHAPSIIFMDEID
Sbjct: 193 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGS 252
Query: 486 SSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEM 545
S GGDSEVQRTMLELLNQLDGFE+TKNI
Sbjct: 253 SRGESGSGGGDSEVQRTMLELLNQLDGFESTKNI-------------------------- 286
Query: 546 AVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRK 605
KV+M TNRIDILDPALLRPGRIDRKIEFP P + RLDIL+IHSRKMNLTRGINL+K
Sbjct: 287 ---KVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKK 343
Query: 606 IAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 665
I++ M GASGAE+K VCTEAGMYALRERRVHV+QEDFEMAV+KVM+KDSE+NMSI KLWK
Sbjct: 344 ISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKKDSEQNMSINKLWK 403
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/116 (67%), Positives = 96/116 (82%)
Query: 124 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 183
++G K YY +KIEEL++ V EK Q+LRRL+AQRNELN +VRML+EELQLL GS+V EV
Sbjct: 13 TKGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEV 72
Query: 184 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
VK M K KVLVKV+PEGKFVVDID +DI +TP+ R AL++ESYTLH+ILPNK+D
Sbjct: 73 VKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKID 128
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 298/417 (71%), Positives = 344/417 (82%), Gaps = 29/417 (6%)
Query: 249 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 308
G KPY+ KI+E +L + K +N+RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 309 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 368
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 369 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 428
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 429 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 488
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+R
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR 257
Query: 489 IESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVA 548
+E GGDSEVQRTMLELLNQLDGFE +KNIK
Sbjct: 258 VEGSGGGDSEVQRTMLELLNQLDGFETSKNIK---------------------------- 289
Query: 549 KVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAE 608
+IMATNR+DILDPALLRPGRIDRKIEFPPP+ AR +ILRIHSRKMNLTRGINLRK+AE
Sbjct: 290 -IIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAE 348
Query: 609 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 665
M G SGA+VKGVCTEAGMYALRERR+HVTQEDFE+AV KVM K+ E +S+ KL+K
Sbjct: 349 KMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQETAISVAKLFK 405
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 89/114 (78%)
Query: 126 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 185
G KPY+ KI+E +L + K +N+RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 186 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK D
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKAD 131
>sp|P41836|PRS8_SCHPO 26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=let1 PE=3 SV=1
Length = 403
Score = 603 bits (1554), Expect = e-171, Method: Compositional matrix adjust.
Identities = 310/423 (73%), Positives = 346/423 (81%), Gaps = 30/423 (7%)
Query: 244 IKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYV 303
++S+E YY KI++ +L + +K QNLRRL+AQRN LNA+VR+LREE+QLLQE GSYV
Sbjct: 10 LQSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYV 69
Query: 304 GEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDP 363
GEV+K M K KVLVKVHPEGK+VVDI +IDI ++ PN RVALRN+SY L KILPNKVDP
Sbjct: 70 GEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDP 129
Query: 364 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 423
LVSLMMVEK+PDSTYEMVGGL+ QIKEIKEVIELPVKHPELF++LGI QPKG+LLYGPPG
Sbjct: 130 LVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPG 189
Query: 424 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEI-D 482
TGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDEI
Sbjct: 190 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 249
Query: 483 SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQED 542
S SG GDSEVQRTMLELLNQLDGFEATKNI
Sbjct: 250 IGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNI----------------------- 286
Query: 543 FEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGIN 602
KVIMATNRIDILDPALLRPGRIDRKIEFPPP+ EAR +ILRIHSR MNLTRGI+
Sbjct: 287 ------KVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGID 340
Query: 603 LRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 662
L+ IAE M GASGAE+KGVCTEAGM+ALRERRVHVTQEDFE+AVAKV+ K MS++K
Sbjct: 341 LKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDSGEMSLQK 400
Query: 663 LWK 665
L+K
Sbjct: 401 LFK 403
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 97/119 (81%)
Query: 121 IKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYV 180
++S+E YY KI++ +L + +K QNLRRL+AQRN LNA+VR+LREE+QLLQE GSYV
Sbjct: 10 LQSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYV 69
Query: 181 GEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
GEV+K M K KVLVKVHPEGK+VVDI +IDI ++ PN RVALRN+SY L KILPNK+D
Sbjct: 70 GEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVD 128
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 564 bits (1454), Expect = e-160, Method: Compositional matrix adjust.
Identities = 286/446 (64%), Positives = 345/446 (77%), Gaps = 39/446 (8%)
Query: 221 VALRNESYTLHKILPNKMDVDEAIKSSEGF-KPYYVTKIEELQLIVAEKEQNLRRLQAQR 279
+ L NE+ + ++P +M +EGF K +Y K++ L++ +A+K + LR L+ +R
Sbjct: 46 ICLLNENPVI-TLIPCRM--------AEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKR 96
Query: 280 NELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVT 339
ELN +VR LREE+ ++QE S VG VV+ M K +VLVK +P+GK++V ++ ++ +++
Sbjct: 97 AELNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELK 156
Query: 340 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 399
RVALR++SY +H+ILP KVDPLVSLMMVEKVPDSTY+M+GGLD QIKEI+EVIELP+
Sbjct: 157 AGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPI 216
Query: 400 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 459
KHPELF+ LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR
Sbjct: 217 KHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSR 276
Query: 460 MVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNI 519
+VRELF+MAREHAPSIIFMDEIDSIGS+R +S G DSEVQRTMLELLNQLDGFE+ NI
Sbjct: 277 LVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNI 336
Query: 520 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPP 579
KVIMATNRIDILDPALLR GRIDRKIEFPPP
Sbjct: 337 -----------------------------KVIMATNRIDILDPALLRTGRIDRKIEFPPP 367
Query: 580 NEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQ 639
NE ARL+IL+IHSRKMNLT+GI+L IA M G SGAEVK VCTEAGMYALRERRVHVTQ
Sbjct: 368 NESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQ 427
Query: 640 EDFEMAVAKVMQKDSEKNMSIKKLWK 665
EDFEMAV KV++K + N ++KL K
Sbjct: 428 EDFEMAVHKVLKKTGDLNSDLRKLLK 453
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Query: 124 SEGF-KPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 182
+EGF K +Y K++ L++ +A+K + LR L+ +R ELN +VR LREE+ ++QE S VG
Sbjct: 63 AEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNVGV 122
Query: 183 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
VV+ M K +VLVK +P+GK++V ++ ++ +++ RVALR++SY +H+ILP K+D
Sbjct: 123 VVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVD 179
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/432 (44%), Positives = 271/432 (62%), Gaps = 50/432 (11%)
Query: 254 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM---------------------LREE 292
Y ++EEL+ + E+ LR +R L ++ M LR +
Sbjct: 33 YFKRLEELERKLRAHEEKLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSD 92
Query: 293 LQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 352
LQ +++ VG V + +D +V+VK KFV ++ +D N++ P VAL +S
Sbjct: 93 LQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMA 152
Query: 353 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 412
+ +LP++ D V M V++ PD +Y+ +GGLD QI+EI+EV+E P+K PELF+ +G+
Sbjct: 153 VVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEP 212
Query: 413 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA 472
PKGVLLYGPPGTGKTLLA+AVA+H + TFIR++ ELVQKFIGEG+R+VRELF +ARE A
Sbjct: 213 PKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKA 272
Query: 473 PSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALR 532
PSIIF+DEID+IG+ R+ + GD EVQRT+ +LL ++DGF+ +I
Sbjct: 273 PSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDI------------- 319
Query: 533 ERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHS 592
KVI ATNR DILDPALLRPGR DR I+ P P+EE R +I +IH+
Sbjct: 320 ----------------KVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHT 363
Query: 593 RKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 652
R MNL ++L+K+A++ GASGA++K +CTEAGM A+RE R VT +DF AV +VM K
Sbjct: 364 RDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGK 423
Query: 653 DSEKNMSIKKLW 664
E++ K+ +
Sbjct: 424 KEEESGEFKRAY 435
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 21/130 (16%)
Query: 131 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM---------------------LREE 169
Y ++EEL+ + E+ LR +R L ++ M LR +
Sbjct: 33 YFKRLEELERKLRAHEEKLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSD 92
Query: 170 LQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 229
LQ +++ VG V + +D +V+VK KFV ++ +D N++ P VAL +S
Sbjct: 93 LQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMA 152
Query: 230 LHKILPNKMD 239
+ +LP++ D
Sbjct: 153 VVDVLPSEKD 162
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/401 (46%), Positives = 264/401 (65%), Gaps = 30/401 (7%)
Query: 250 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 309
F Y + L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FHGNYDDYVTYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGSVIEV 67
Query: 310 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 369
+D + +V+ + +FVV I ID + + P RVAL + + +ILP DP V
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFE 127
Query: 370 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 429
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 128 VVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 187
Query: 430 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRI 489
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ R+
Sbjct: 188 AKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRL 247
Query: 490 ESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAK 549
+ +GG+ EV RT+++LL ++DGF+ N+ K
Sbjct: 248 DETTGGEREVNRTLMQLLAEMDGFDPRGNV-----------------------------K 278
Query: 550 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAEL 609
VI ATNR DILDPALLRPGR DR IE P P+ E RL+IL++H+R+M L RG++LR IAEL
Sbjct: 279 VIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAEL 337
Query: 610 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVM 650
GASGA++K + TEAGM+A+RERR +VTQEDF A+ KV+
Sbjct: 338 TEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVL 378
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%)
Query: 127 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 186
F Y + L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FHGNYDDYVTYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGSVIEV 67
Query: 187 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
+D + +V+ + +FVV I ID + + P RVAL + + +ILP D
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKD 120
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/401 (46%), Positives = 265/401 (66%), Gaps = 30/401 (7%)
Query: 250 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 309
F+ Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 11 FQGDYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEV 70
Query: 310 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 369
+D+ + +V+ + +FVV I ID + P RVAL + + +ILP DP V
Sbjct: 71 LDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFE 130
Query: 370 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 429
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 131 VIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 190
Query: 430 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRI 489
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ R+
Sbjct: 191 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRM 250
Query: 490 ESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAK 549
+ +GG+ EV RT+++LL ++DGF+ N+ K
Sbjct: 251 DETTGGEREVNRTLMQLLAEMDGFDPRGNV-----------------------------K 281
Query: 550 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAEL 609
VI ATNR DILDPALLRPGR DR IE P P+ E RL+IL++H+R+M L +G++LR IAE+
Sbjct: 282 VIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEM 340
Query: 610 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVM 650
GASGA++K + TEAGM+A+RERR +VTQEDF AV KV+
Sbjct: 341 TEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVL 381
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%)
Query: 127 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 186
F+ Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 11 FQGDYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEV 70
Query: 187 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
+D+ + +V+ + +FVV I ID + P RVAL + + +ILP D
Sbjct: 71 LDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKD 123
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/422 (45%), Positives = 279/422 (66%), Gaps = 36/422 (8%)
Query: 238 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 297
M ++ EG+ Y + L+ + + E +R L+A + L ++ LR E+ L+
Sbjct: 1 MSIENTDVHPEGYDDY----VTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLR 56
Query: 298 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 357
+ ++ G V++ +D ++ +V+ + +FVV I I+ + + P RVAL + + ++L
Sbjct: 57 QPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELL 116
Query: 358 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 417
P++ DP V V + P TY +GGL+ Q++E++E IELP+KHPELF+ +GI PKGVL
Sbjct: 117 PSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVL 176
Query: 418 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIF 477
LYGPPG GKTL+A+AVA+H TFIRV GSELV+KFIGEG+R+V ELF +A+E AP+IIF
Sbjct: 177 LYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIF 236
Query: 478 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVH 537
+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+ N+
Sbjct: 237 IDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNV------------------ 278
Query: 538 VTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNL 597
KVI ATNR DILDPALLRPGR DR IE P P+ + RL+IL++H+RKMNL
Sbjct: 279 -----------KVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL 327
Query: 598 TRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 657
+G++LR IAE+ GASGA++K + TEAGM+A+R+RR +VTQ+DF AV KV+ SEK
Sbjct: 328 -KGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI--GSEKR 384
Query: 658 MS 659
++
Sbjct: 385 LA 386
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 125 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 184
EG+ Y + L+ + + E +R L+A + L ++ LR E+ L++ ++ G V+
Sbjct: 11 EGYDDY----VTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVI 66
Query: 185 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
+ +D ++ +V+ + +FVV I I+ + + P RVAL + + ++LP++ D
Sbjct: 67 EVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKD 121
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 189/419 (45%), Positives = 279/419 (66%), Gaps = 36/419 (8%)
Query: 241 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQG 300
D IK SE + Y I L+ + + E +R L+A + L ++ LR E+ L++
Sbjct: 5 DVGIKPSEEYDDY----IMYLKKRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPP 60
Query: 301 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 360
++ G +++ +D+ + +V+ + +FVV I I+ ++ P RVAL + + ++LP++
Sbjct: 61 AFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSE 120
Query: 361 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 420
DP V V + P +Y +GGLD Q++E++E IELP+KHPELF+ +GI PKGVLLYG
Sbjct: 121 KDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYG 180
Query: 421 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 480
PPG GKTL+A+A+AH TFIRV GSELV+KFIGEG+R+V ELF +A+E AP+IIF+DE
Sbjct: 181 PPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDE 240
Query: 481 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQ 540
ID+IG+ R++ +GG+ EV RT+++LL ++DGF+ + N+
Sbjct: 241 IDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNV--------------------- 279
Query: 541 EDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRG 600
K+I ATNR DILDPALLRPGR DR IE P PN ++RL+IL+IH+++MNL +G
Sbjct: 280 --------KIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNL-KG 330
Query: 601 INLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMS 659
++LR IAE+ GASGA++K + EAGM+A+R+RR +VTQEDF A+ KV+ SE+ +S
Sbjct: 331 VDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKVL--GSEQRLS 387
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 118 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQG 177
D IK SE + Y I L+ + + E +R L+A + L ++ LR E+ L++
Sbjct: 5 DVGIKPSEEYDDY----IMYLKKRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPP 60
Query: 178 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 237
++ G +++ +D+ + +V+ + +FVV I I+ ++ P RVAL + + ++LP++
Sbjct: 61 AFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSE 120
Query: 238 MD 239
D
Sbjct: 121 KD 122
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 180/380 (47%), Positives = 249/380 (65%), Gaps = 29/380 (7%)
Query: 275 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 334
++++R +VR LR E++ L+ VG V ++ +V+VK KFVV+ + I+
Sbjct: 37 IESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYIN 96
Query: 335 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 394
++ P RVAL ++ + +LP DP+V VE+ P+ +YE +GGLD QI+EI+E
Sbjct: 97 EEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREA 156
Query: 395 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 454
+ELP+ PELF +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIRV GSE VQK+I
Sbjct: 157 VELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYI 216
Query: 455 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 514
GEG+R+VRE+F +A+E APSIIF+DE+D+I + R S + GD EVQRTM++LL +LDGF+
Sbjct: 217 GEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFD 276
Query: 515 ATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKI 574
++ KVI ATNRIDILDPA+LRPGR DR I
Sbjct: 277 PRGDV-----------------------------KVIGATNRIDILDPAILRPGRFDRII 307
Query: 575 EFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 634
E P P E R+ I +IH+RKM L ++ +++A + GASGA++K +CTEAGM+A+RE R
Sbjct: 308 EVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREER 367
Query: 635 VHVTQEDFEMAVAKVMQKDS 654
VT DF A+ KV++K +
Sbjct: 368 AKVTMLDFTKAIEKVLKKTT 387
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 518 NIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRI 557
+IK +CTEAGM+A+RE R VT DF A+ KV+ T I
Sbjct: 350 DIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKKTTPI 389
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 152 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 211
++++R +VR LR E++ L+ VG V ++ +V+VK KFVV+ + I+
Sbjct: 37 IESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYIN 96
Query: 212 INDVTPNCRVALRNESYTLHKILPNKMD 239
++ P RVAL ++ + +LP D
Sbjct: 97 EEELKPGARVALNQQTLAIVNVLPTSKD 124
>sp|Q9V287|PAN_PYRAB Proteasome-activating nucleotidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pan PE=3 SV=2
Length = 396
Score = 352 bits (902), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 184/401 (45%), Positives = 264/401 (65%), Gaps = 30/401 (7%)
Query: 250 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 309
F Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FHENYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEV 67
Query: 310 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 369
+D + +V+ + +FVV I I+ + + P RVAL + + ++LP+ DP V
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFE 127
Query: 370 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 429
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 128 VIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 187
Query: 430 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRI 489
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ R+
Sbjct: 188 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRM 247
Query: 490 ESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAK 549
+ +GG+ EV RT+++LL ++DGF+ N+ K
Sbjct: 248 DETTGGEREVNRTLMQLLAEMDGFDPRGNV-----------------------------K 278
Query: 550 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAEL 609
VI ATNR DILDPALLRPGR DR IE P P+ E RL+IL++H+R+M L + ++LR IAE+
Sbjct: 279 VIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEI 337
Query: 610 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVM 650
GASGA++K + TEAGM+A+RERR +VTQEDF AV KV+
Sbjct: 338 TEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVL 378
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%)
Query: 127 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 186
F Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FHENYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEV 67
Query: 187 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
+D + +V+ + +FVV I I+ + + P RVAL + + ++LP+ D
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKD 120
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/406 (45%), Positives = 268/406 (66%), Gaps = 32/406 (7%)
Query: 254 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 313
Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++ +D
Sbjct: 13 YEDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDD 72
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
+ +V+ + +FVV I I+ + + P RVAL + + ++LP + DP V V +
Sbjct: 73 RAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEK 132
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
P TY+ +GGL+ Q+ E++E +ELP+KHPELF+ +GI PKGVLLYGPPG GKTL+A+AV
Sbjct: 133 PRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAV 192
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+H TFIRV GSELV+KFIGEG+R+V ELF MA+E AP+IIF+DEID+IG+ R++ +
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETT 252
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GG+ EV RT+++LL ++DGF+ N+ KVI A
Sbjct: 253 GGEREVNRTLMQLLAEMDGFDPRGNV-----------------------------KVIAA 283
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR DILDPALLRPGR DR IE P P+ RL+IL++H+RKMNL R ++L IA++ GA
Sbjct: 284 TNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNL-RNVDLSIIADITEGA 342
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMS 659
SGA++K + TEAGM+A+R+RR +VTQEDF AV KV+ +EK ++
Sbjct: 343 SGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVL--GAEKRLA 386
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 58/109 (53%)
Query: 131 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 190
Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++ +D
Sbjct: 13 YEDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDD 72
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
+ +V+ + +FVV I I+ + + P RVAL + + ++LP + D
Sbjct: 73 RAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKD 121
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2
SV=1
Length = 425
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/426 (45%), Positives = 264/426 (61%), Gaps = 38/426 (8%)
Query: 235 PNKMDVDE-AIKSSEGFKPY--YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LR 290
P +D D+ A+ + G PY ++ K E+ +A+K +L ++ L A + L
Sbjct: 14 PRPLDEDDIALLKTYGLGPYSTHIKKAEKEVKDLAKKVNDLCGIKESDTGLAAPSQWDLV 73
Query: 291 EELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 345
+ Q++QE Q + +++ P + K ++ V KFVV + + D+ RV
Sbjct: 74 SDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVG 133
Query: 346 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 405
+ Y + LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F
Sbjct: 134 VDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKF 193
Query: 406 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 465
LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF
Sbjct: 194 VKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 253
Query: 466 VMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTE 525
MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NI
Sbjct: 254 QMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNI------ 307
Query: 526 AGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 585
KV+MATNR D LDPALLRPGR+DRK+EF P+ E+R
Sbjct: 308 -----------------------KVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRT 344
Query: 586 DILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 645
I +IH+R MN R I +A L P ++GA+++ VCTEAGMYA+R RR VT++DF A
Sbjct: 345 QIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDA 404
Query: 646 VAKVMQ 651
V KV++
Sbjct: 405 VNKVIK 410
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/426 (45%), Positives = 262/426 (61%), Gaps = 38/426 (8%)
Query: 235 PNKMDVDE-AIKSSEGFKPYYVT--KIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LR 290
P +D D+ A+ + G PY + K+E+ +A+K +L ++ L + L
Sbjct: 15 PRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLV 74
Query: 291 EELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 345
+ Q++QE Q + +++ P D K ++ V KFVV + + D+ RV
Sbjct: 75 SDKQMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVG 134
Query: 346 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 405
+ Y + LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F
Sbjct: 135 VDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKF 194
Query: 406 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 465
LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF
Sbjct: 195 VKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 254
Query: 466 VMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTE 525
MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NI
Sbjct: 255 QMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNI------ 308
Query: 526 AGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 585
KV+MATNR D LDPALLRPGR+DRK+EF P+ E R
Sbjct: 309 -----------------------KVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRT 345
Query: 586 DILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 645
I +IH+R MN R I +A L P ++GA+++ VCTEAGMYA+R RR VT++DF A
Sbjct: 346 QIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDA 405
Query: 646 VAKVMQ 651
V KV++
Sbjct: 406 VNKVIK 411
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 349 bits (895), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 193/426 (45%), Positives = 263/426 (61%), Gaps = 38/426 (8%)
Query: 235 PNKMDVDE-AIKSSEGFKPYYVT--KIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LR 290
P +D D+ A+ + G PY + K+E+ +++K +L ++ L A + L
Sbjct: 15 PRPLDEDDIALLKTYGLGPYSASIKKVEKEIKDMSKKVNDLIGIKESDTGLAAPSQWDLV 74
Query: 291 EELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 345
+ Q++QE Q + +++ P + K ++ V KFVV + + D+ RV
Sbjct: 75 SDKQMMQEEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVG 134
Query: 346 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 405
+ Y + LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F
Sbjct: 135 VDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKF 194
Query: 406 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 465
LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF
Sbjct: 195 VKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 254
Query: 466 VMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTE 525
MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NI
Sbjct: 255 QMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNI------ 308
Query: 526 AGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 585
KV+MATNR D LDPALLRPGR+DRK+EF P+ E R
Sbjct: 309 -----------------------KVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRT 345
Query: 586 DILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 645
I +IH+R MN R I +A L P ++GA+++ VCTEAGMYA+R RR VT++DF A
Sbjct: 346 QIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDA 405
Query: 646 VAKVMQ 651
V KV++
Sbjct: 406 VNKVIK 411
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 349 bits (895), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 193/426 (45%), Positives = 263/426 (61%), Gaps = 38/426 (8%)
Query: 235 PNKMDVDE-AIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LR 290
P +D D+ A+ + G PY + K+E+ +A+K +L ++ L + L
Sbjct: 15 PRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLV 74
Query: 291 EELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 345
+ Q++QE Q + +++ P + K ++ V KFVV + + D+ RV
Sbjct: 75 SDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVG 134
Query: 346 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 405
+ Y + LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F
Sbjct: 135 VDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKF 194
Query: 406 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 465
LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF
Sbjct: 195 VKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 254
Query: 466 VMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTE 525
MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NI
Sbjct: 255 QMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNI------ 308
Query: 526 AGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 585
KV+MATNR D LDPALLRPGR+DRK+EF P+ E+R
Sbjct: 309 -----------------------KVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRT 345
Query: 586 DILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 645
I +IH+R MN R I +A L P ++GA+++ VCTEAGMYA+R RR VT++DF A
Sbjct: 346 QIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDA 405
Query: 646 VAKVMQ 651
V KV++
Sbjct: 406 VNKVIK 411
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 247/363 (68%), Gaps = 29/363 (7%)
Query: 288 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 347
+LR EL ++ VG VV + ++KV+VK F+V++ ++ +D+ P RV L
Sbjct: 79 ILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLN 138
Query: 348 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 407
++ T+ +LP D M V++ P+ YE +GGL+ Q++EI+EV+ELP+KHPELF+
Sbjct: 139 QQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEK 198
Query: 408 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 467
+GI PKG+LLYGPPGTGKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +
Sbjct: 199 VGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKL 258
Query: 468 AREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAG 527
A+E APSIIF+DEID+I + R ++ +GGD EVQRT+++LL ++DGF+A ++
Sbjct: 259 AKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDV-------- 310
Query: 528 MYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDI 587
K+I ATNR DILDPA+LRPGR DR IE P P+E+ RL+I
Sbjct: 311 ---------------------KIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEI 349
Query: 588 LRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVA 647
L+IH+RKMNL +NL +IA++ G GAE+K +CTEAGM A+RE R +VT +DF AV
Sbjct: 350 LKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVE 409
Query: 648 KVM 650
K+M
Sbjct: 410 KIM 412
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 165 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 224
+LR EL ++ VG VV + ++KV+VK F+V++ ++ +D+ P RV L
Sbjct: 79 ILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLN 138
Query: 225 NESYTLHKILPNKMD 239
++ T+ +LP D
Sbjct: 139 QQTLTVVDVLPENKD 153
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 171/382 (44%), Positives = 253/382 (66%), Gaps = 29/382 (7%)
Query: 275 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 334
++ +R L+ +V+ LR E++ + + V + +D +V VK FV++ + ID
Sbjct: 47 IENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFID 106
Query: 335 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 394
+ P RVAL +++++ +LP++ DP+V+ M VE+ PD +YE +GGL+ Q++E+KE
Sbjct: 107 RKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKET 166
Query: 395 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 454
+ELP+K PELF+ +GI PKGVLLYGPPGTGKTLLA+AVAH T TFI++ SE V+K+I
Sbjct: 167 VELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYI 226
Query: 455 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 514
GEG+R+VR +F +A+E +PSIIF+DEID++ + R++S + GD EVQRT+++LL +LDGFE
Sbjct: 227 GEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFE 286
Query: 515 ATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKI 574
+ N+ ++ ATNR DILDPALLRPGR DR I
Sbjct: 287 SRGNV-----------------------------GIVAATNRPDILDPALLRPGRFDRFI 317
Query: 575 EFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 634
E P PNE+ R +IL+IH+ M L +++ +A + GASGA++K +CTEAGM+A+R+ R
Sbjct: 318 EVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDER 377
Query: 635 VHVTQEDFEMAVAKVMQKDSEK 656
VT DF AV K+M + E+
Sbjct: 378 DEVTMADFMDAVDKIMGVEKEE 399
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%)
Query: 152 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 211
++ +R L+ +V+ LR E++ + + V + +D +V VK FV++ + ID
Sbjct: 47 IENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFID 106
Query: 212 INDVTPNCRVALRNESYTLHKILPNKMD 239
+ P RVAL +++++ +LP++ D
Sbjct: 107 RKQLEPGARVALNQQTFSIVDVLPSEKD 134
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 174/338 (51%), Positives = 224/338 (66%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ FIRV GSELVQK++GEG+RMVRELF MAR +IF DEID+IG +R + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+NQLDGF+ NI KV+MA
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNI-----------------------------KVLMA 320
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR D LDPAL+RPGR+DRKIEF P+ E R IL+IH+R M++ R I +A L P +
Sbjct: 321 TNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNS 380
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF AV KV++
Sbjct: 381 TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K ++ V KFVVD+ + D+ RV + Y +H LP K+D
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKID 158
>sp|A9A916|PAN_METM6 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1
Length = 407
Score = 345 bits (885), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 181/417 (43%), Positives = 274/417 (65%), Gaps = 39/417 (9%)
Query: 236 NKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 295
NKMD+ E FK T+I EL+ V E + + + ++ + +L+ EL
Sbjct: 14 NKMDLKE-------FKEK--TQIAELESKVLRLELKNKDISRENVQIKKENEILKRELDK 64
Query: 296 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 355
L+ +G ++ ++++K +VK F+V++ + +D D+ P RV L ++ + +
Sbjct: 65 LRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVE 124
Query: 356 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 415
+LP + D M +E+ PD ++E +GGL+NQI++IKEV+ELP+K+PELF+ +GI PKG
Sbjct: 125 VLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKG 184
Query: 416 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 475
VLLYGPPGTGKTLLA+AVA+ T +F+RV GSELV+KFIGEG+++VR++F +A+E +P I
Sbjct: 185 VLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCI 244
Query: 476 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERR 535
IF+DEID++ S R ES +GGD EVQRT+++LL ++DGF++ ++
Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDV---------------- 288
Query: 536 VHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKM 595
K+I ATNR DILDPA+LRPGR DR IE P+E+ RLDIL+IH+ KM
Sbjct: 289 -------------KIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKM 335
Query: 596 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 652
NL +G++LR++A+L GA++K VCTEAGM+A+RE R + +DF+ A++K+ K
Sbjct: 336 NL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGK 391
Score = 40.4 bits (93), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 142 VAEKEQNLRRLQAQRNEL---NAKVR----MLREELQLLQEQGSYVGEVVKPMDKKKVLV 194
+AE E + RL+ + ++ N +++ +L+ EL L+ +G ++ ++++K +V
Sbjct: 27 IAELESKVLRLELKNKDISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKAVV 86
Query: 195 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K F+V++ + +D D+ P RV L ++ + ++LP + D
Sbjct: 87 KSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKD 131
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 223/338 (65%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ FIRV GSELVQK++GEG+RMVRELF MAR +IF DEID+IG +R + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+NQLDGF+ NI KV+MA
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNI-----------------------------KVLMA 320
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR D LDPAL+RPGR+DRKIEF P+ E R I +IH+R M++ R I +A L P +
Sbjct: 321 TNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNS 380
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF AV KV++
Sbjct: 381 TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
Score = 32.7 bits (73), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K ++ V KFVVD+ + D+ RV + Y +H LP K+D
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKID 158
>sp|Q4R4R0|PRS7_MACFA 26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2
PE=2 SV=3
Length = 433
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 223/338 (65%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ FIRV GSELVQK++GEG+RMVRELF MAR +IF DEID+IG +R + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+NQLDGF+ NI KV+MA
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNI-----------------------------KVLMA 320
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR D LDPAL+RPGR+DRKIEF P+ E R I +IH+R M++ R I +A L P +
Sbjct: 321 TNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNS 380
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF AV KV++
Sbjct: 381 TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K ++ V KFVVD+ + D+ RV + Y +H LP K+D
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKID 158
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1
SV=3
Length = 433
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 223/338 (65%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ FIRV GSELVQK++GEG+RMVRELF MAR +IF DEID+IG +R + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+NQLDGF+ NI KV+MA
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNI-----------------------------KVLMA 320
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR D LDPAL+RPGR+DRKIEF P+ E R I +IH+R M++ R I +A L P +
Sbjct: 321 TNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNS 380
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF AV KV++
Sbjct: 381 TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K ++ V KFVVD+ + D+ RV + Y +H LP K+D
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKID 158
>sp|Q5E9F9|PRS7_BOVIN 26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3
Length = 433
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 223/338 (65%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ FIRV GSELVQK++GEG+RMVRELF MAR +IF DEID+IG +R + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+NQLDGF+ NI KV+MA
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNI-----------------------------KVLMA 320
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR D LDPAL+RPGR+DRKIEF P+ E R I +IH+R M++ R I +A L P +
Sbjct: 321 TNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNS 380
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF AV KV++
Sbjct: 381 TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K ++ V KFVVD+ + D+ RV + Y +H LP K+D
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKID 158
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2
SV=1
Length = 433
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 223/338 (65%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ FIRV GSELVQK++GEG+RMVRELF MAR +IF DEID+IG +R + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+NQLDGF+ NI KV+MA
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNI-----------------------------KVLMA 320
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR D LDPAL+RPGR+DRKIEF P+ E R I +IH+R M++ R I +A L P +
Sbjct: 321 TNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNS 380
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF AV KV++
Sbjct: 381 TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIK 418
Score = 32.7 bits (73), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K ++ V KFVVD+ + D+ RV + Y +H LP K+D
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKID 158
>sp|A4G0S4|PAN_METM5 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1
Length = 407
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/417 (43%), Positives = 273/417 (65%), Gaps = 39/417 (9%)
Query: 236 NKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 295
NKMD+ E FK T+I EL+ V E + + + ++ + +L+ EL
Sbjct: 14 NKMDLKE-------FKEK--TQIAELESKVLRLELKNKDISRENVQIKKENEILKRELDK 64
Query: 296 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 355
L+ +G ++ ++++K +VK F+V++ + +D +D+ P RV L ++ + +
Sbjct: 65 LRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVE 124
Query: 356 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 415
+LP + D M +E+ PD ++E +GGL+NQI++IKEV+ELP+K+PELF+ +GI PKG
Sbjct: 125 VLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKG 184
Query: 416 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 475
VLLYGPPGTGKTLLA+AVA+ T +F+RV GSELV+KFIGEG+++VR++F +A+E +P I
Sbjct: 185 VLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCI 244
Query: 476 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERR 535
IF+DEID++ S R ES +GGD EVQRT+++LL ++DGF++ ++
Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDV---------------- 288
Query: 536 VHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKM 595
K+I ATNR DILDPA+LRPGR DR IE P+E+ RLDIL+IH+ KM
Sbjct: 289 -------------KIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKM 335
Query: 596 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 652
NL +G++LR++A++ GA++K VCTEAGM+A+RE R + +DF A+ K+ K
Sbjct: 336 NL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGK 391
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 142 VAEKEQNLRRLQAQRNEL---NAKVR----MLREELQLLQEQGSYVGEVVKPMDKKKVLV 194
+AE E + RL+ + ++ N +++ +L+ EL L+ +G ++ ++++K +V
Sbjct: 27 IAELESKVLRLELKNKDISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKAVV 86
Query: 195 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K F+V++ + +D +D+ P RV L ++ + ++LP + D
Sbjct: 87 KSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKD 131
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/387 (46%), Positives = 246/387 (63%), Gaps = 29/387 (7%)
Query: 269 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 328
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 329 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 388
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 389 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 448
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 449 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 508
L+QK++G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 509 QLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPG 568
QLDGF++ ++ KVIMATNRI+ LDPAL+RPG
Sbjct: 315 QLDGFDSRGDV-----------------------------KVIMATNRIETLDPALIRPG 345
Query: 569 RIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 628
RIDRKIEFP P+E+ + I +IH+ +M L + L + SGA++K +CTEAG+
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLM 405
Query: 629 ALRERRVHVTQEDFEMAVAKVMQKDSE 655
ALRERR+ VT EDF+ + V+ K E
Sbjct: 406 ALRERRMKVTNEDFKKSKENVLYKKQE 432
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/387 (46%), Positives = 246/387 (63%), Gaps = 29/387 (7%)
Query: 269 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 328
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 329 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 388
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 389 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 448
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 449 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 508
L+QK++G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 509 QLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPG 568
QLDGF++ ++ KVIMATNRI+ LDPAL+RPG
Sbjct: 315 QLDGFDSRGDV-----------------------------KVIMATNRIETLDPALIRPG 345
Query: 569 RIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 628
RIDRKIEFP P+E+ + I +IH+ +M L + L + SGA++K +CTEAG+
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLM 405
Query: 629 ALRERRVHVTQEDFEMAVAKVMQKDSE 655
ALRERR+ VT EDF+ + V+ K E
Sbjct: 406 ALRERRMKVTNEDFKKSKENVLYKKQE 432
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/387 (46%), Positives = 246/387 (63%), Gaps = 29/387 (7%)
Query: 269 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 328
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 329 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 388
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 389 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 448
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 449 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 508
L+QK++G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 509 QLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPG 568
QLDGF++ ++ KVIMATNRI+ LDPAL+RPG
Sbjct: 315 QLDGFDSRGDV-----------------------------KVIMATNRIETLDPALIRPG 345
Query: 569 RIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 628
RIDRKIEFP P+E+ + I +IH+ +M L + L + SGA++K +CTEAG+
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLM 405
Query: 629 ALRERRVHVTQEDFEMAVAKVMQKDSE 655
ALRERR+ VT EDF+ + V+ K E
Sbjct: 406 ALRERRMKVTNEDFKKSKENVLYKKQE 432
>sp|Q6LWR0|PAN_METMP Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain S2 / LL) GN=pan PE=3 SV=1
Length = 407
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 172/395 (43%), Positives = 264/395 (66%), Gaps = 37/395 (9%)
Query: 265 VAEKEQNLRRLQAQRNELN-------AKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLV 317
+AE E + RL+ + ++N + +L+ EL L+ +G ++ ++++K +V
Sbjct: 27 IAELESKVLRLELKNKDINRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVV 86
Query: 318 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDST 377
K F+V++ + +D D+ P RV L ++ + ++LP + D M +E+ PD +
Sbjct: 87 KSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDIS 146
Query: 378 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 437
+E +GGL+NQI++IKEV+ELP+K+PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T
Sbjct: 147 FEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYET 206
Query: 438 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDS 497
+F+RV GSELV+KFIGEG+++VR++F +A+E +P IIF+DEID++ S R ES +GGD
Sbjct: 207 NASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDR 266
Query: 498 EVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRI 557
EVQRT+++LL ++DGF++ ++ K+I ATNR
Sbjct: 267 EVQRTLMQLLAEMDGFDSRGDV-----------------------------KIIAATNRP 297
Query: 558 DILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAE 617
DILDPA+LRPGR DR IE P+E+ RL+IL+IH+ KMNL +G++LR++A++ GA+
Sbjct: 298 DILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGAD 356
Query: 618 VKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 652
+K VCTEAGM+A+RE R + +DF A++K+ K
Sbjct: 357 LKAVCTEAGMFAIREEREFIKMDDFREAISKITGK 391
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 142 VAEKEQNLRRLQAQRNELN-------AKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLV 194
+AE E + RL+ + ++N + +L+ EL L+ +G ++ ++++K +V
Sbjct: 27 IAELESKVLRLELKNKDINRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVV 86
Query: 195 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K F+V++ + +D D+ P RV L ++ + ++LP + D
Sbjct: 87 KSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKD 131
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2
PE=1 SV=3
Length = 433
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/338 (50%), Positives = 222/338 (65%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ FI V GSELVQK++GEG+RMVRELF MAR +IF DEID+IG +R + G+
Sbjct: 230 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+NQLDGF+ NI KV+MA
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNI-----------------------------KVLMA 320
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR D LDPAL+RPGR+DRKIEF P+ E R I +IH+R M++ R I +A L P +
Sbjct: 321 TNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNS 380
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF AV KV++
Sbjct: 381 TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K ++ V KFVVD+ + D+ RV + Y +H LP K+D
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKID 158
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 273/417 (65%), Gaps = 39/417 (9%)
Query: 236 NKMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 295
NKMD+ E FK T+I EL+ V E + + + ++ + +L+ EL
Sbjct: 14 NKMDLKE-------FKEK--TQIAELESKVLRLELKNKDVTRENVQIKKENEILKRELDK 64
Query: 296 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 355
L+ +G ++ ++++K +VK F+V++ + +D D+ P RV L ++ + +
Sbjct: 65 LRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVE 124
Query: 356 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 415
+LP + D M +E+ PD ++E +GGL+NQI++IKEV+ELP+K+PELF+ +GI PKG
Sbjct: 125 VLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKG 184
Query: 416 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 475
VLLYGPPGTGKTLLA+AVA+ T +F+RV GSELV+KFIGEG+++VR++F +A+E +P I
Sbjct: 185 VLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCI 244
Query: 476 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERR 535
IF+DEID++ S R ES +GGD EVQRT+++LL ++DGF++ ++
Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDV---------------- 288
Query: 536 VHVTQEDFEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKM 595
K+I ATNR DILDPA+LRPGR DR IE P+E+ RL+IL+IH+ KM
Sbjct: 289 -------------KIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKM 335
Query: 596 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 652
NL + ++LR++A+L GA++K VCTEAGM+A+RE R + +DF+ A++K+ K
Sbjct: 336 NL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGK 391
Score = 40.4 bits (93), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 142 VAEKEQNLRRLQAQRNEL---NAKVR----MLREELQLLQEQGSYVGEVVKPMDKKKVLV 194
+AE E + RL+ + ++ N +++ +L+ EL L+ +G ++ ++++K +V
Sbjct: 27 IAELESKVLRLELKNKDVTRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVV 86
Query: 195 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
K F+V++ + +D D+ P RV L ++ + ++LP + D
Sbjct: 87 KSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKD 131
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/449 (41%), Positives = 266/449 (59%), Gaps = 60/449 (13%)
Query: 207 DKNIDINDVTPNCRVALRNESYTLHKILPNKMDVDEAIKSSEGFKPYYVTKIEELQLIVA 266
D + + VTP+ R L+ L +I M DE I++ E KP
Sbjct: 43 DAAMKLPQVTPHTRCRLK--LLKLERIKDYLMMEDEFIRNQERLKP-------------- 86
Query: 267 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 326
Q ++NE R ++ L+ VG + + +D +V +
Sbjct: 87 ---------QDEKNEEE------RSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHY 131
Query: 327 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 386
V I +D + + P C V L ++ + + +L + DP+V++M +EK P TY +GGLD
Sbjct: 132 VSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDT 191
Query: 387 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 446
QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV G
Sbjct: 192 QIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVG 251
Query: 447 SELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 506
SEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLEL
Sbjct: 252 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLEL 311
Query: 507 LNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLR 566
LNQLDGF++ ++ KVIMATNRI+ LDPAL+R
Sbjct: 312 LNQLDGFDSRGDV-----------------------------KVIMATNRIETLDPALIR 342
Query: 567 PGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 626
PGRIDRKIEFP P+E+ + I IH+ +M L +NL ++ SGA++K +CTEAG
Sbjct: 343 PGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAG 402
Query: 627 MYALRERRVHVTQEDFEMAVAKVMQKDSE 655
+ ALRERR+ VT EDF+ + V+ + E
Sbjct: 403 LMALRERRMKVTNEDFKKSKESVLYRKKE 431
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/387 (45%), Positives = 246/387 (63%), Gaps = 29/387 (7%)
Query: 269 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 328
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 329 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 388
I +D + + P C V L ++ + + +L + DPLV++M +EK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQI 194
Query: 389 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 448
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 449 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 508
L+QK++G+G ++VRELF +A EH PSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 509 QLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLRPG 568
QLDGF++ ++ KVIMATNRI+ LDPAL+RPG
Sbjct: 315 QLDGFDSRGDV-----------------------------KVIMATNRIETLDPALIRPG 345
Query: 569 RIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 628
RIDRKIEFP P+E+ + I +IH+ +M L + L ++ SGA++K +CTEAG+
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLM 405
Query: 629 ALRERRVHVTQEDFEMAVAKVMQKDSE 655
ALRERR+ VT EDF+ + + K +E
Sbjct: 406 ALRERRMKVTNEDFKKSKENFLYKKTE 432
>sp|Q18787|PRS7_CAEEL 26S protease regulatory subunit 7 OS=Caenorhabditis elegans
GN=rpt-1 PE=1 SV=1
Length = 435
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 225/338 (66%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
+ L+ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG +QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ FIRV GSELVQK++GEG+RMVRELF MAR +IF DEID++G +R + G
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+NQLDGF+ NI KV+MA
Sbjct: 292 GGDNEVQRTMLELINQLDGFDPRGNI-----------------------------KVLMA 322
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR D LDPAL+RPGR+DRK+EF P+ R IL+IH+++M++ R I +A L P +
Sbjct: 323 TNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNS 382
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF A+ KV++
Sbjct: 383 TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVK 420
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 191 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
+ L+ V KFVVD+ ++ D+ RV + Y +H LP K+D
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKID 160
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 338 bits (868), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 185/420 (44%), Positives = 262/420 (62%), Gaps = 39/420 (9%)
Query: 250 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAK-------VRMLREELQLLQEQGSY 302
F Y + ++++L+ ++ R+++ ++ + K +R L EL L+
Sbjct: 23 FSKYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLI 82
Query: 303 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 362
VG ++ M K+++K KFVV+ + I+ +V P +VAL +S + ++LP D
Sbjct: 83 VGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKD 142
Query: 363 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 422
P V M V P+ Y+ +GGL+ QI E+KE +ELP+ PELF +GI PKGVLLYGPP
Sbjct: 143 PSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPP 202
Query: 423 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID 482
GTGKTLLA+AVA+ T+ TFIR+ GSELVQK+IGEG+RMVRELF +A+E +PSIIF+DEID
Sbjct: 203 GTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEID 262
Query: 483 SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQED 542
SIG+ R++S + GD EVQRT+++LL ++DGF+ N+
Sbjct: 263 SIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNV----------------------- 299
Query: 543 FEMAVAKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGIN 602
+++ ATNR DILDPALLRPGR DR I+ P P EAR IL+IH+RKMNL ++
Sbjct: 300 ------RILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVD 353
Query: 603 LRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 662
LRKIA + +SGA++ + EAGM+A+R R V DF AVAKVM E+N S+ +
Sbjct: 354 LRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVM---GERNRSMAQ 410
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 127 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAK-------VRMLREELQLLQEQGSY 179
F Y + ++++L+ ++ R+++ ++ + K +R L EL L+
Sbjct: 23 FSKYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLI 82
Query: 180 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMD 239
VG ++ M K+++K KFVV+ + I+ +V P +VAL +S + ++LP D
Sbjct: 83 VGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKD 142
>sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT1 PE=1
SV=1
Length = 467
Score = 338 bits (867), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 223/338 (65%), Gaps = 29/338 (8%)
Query: 314 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 373
K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE+
Sbjct: 144 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEK 203
Query: 374 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 433
PD TY VGG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 204 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 263
Query: 434 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 493
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR IIF DEID++G +R + G+
Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGA 323
Query: 494 GGDSEVQRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMA 553
GGD+EVQRTMLEL+ QLDGF+ NI KV+ A
Sbjct: 324 GGDNEVQRTMLELITQLDGFDPRGNI-----------------------------KVMFA 354
Query: 554 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGA 613
TNR + LDPALLRPGRIDRK+EF P+ E R +I RIHS+ M++ RGI I+ L P +
Sbjct: 355 TNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNS 414
Query: 614 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 651
+GAE++ VCTEAGM+A+R RR T++DF AV KV+
Sbjct: 415 TGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVIS 452
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei (strain
6A8) GN=pan PE=3 SV=1
Length = 436
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/390 (44%), Positives = 247/390 (63%), Gaps = 29/390 (7%)
Query: 260 ELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKV 319
EL+ + + E + R ++ Q+ +VR L+ E + L+ +G VV +D +V+V+
Sbjct: 59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRS 118
Query: 320 HPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYE 379
+F+V +++ +D+ P R L +S + ++LP+ D V M + P Y
Sbjct: 119 SAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYT 178
Query: 380 MVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 439
+GGL QI E++E +ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T
Sbjct: 179 DIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNA 238
Query: 440 TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEV 499
F+RV GSELVQK+IGEG+R+VRELF +A++ AP+IIF+DEID++G+SR E+ + GD EV
Sbjct: 239 HFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREV 298
Query: 500 QRTMLELLNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDI 559
QRT+++LL +DGFE ++K +I ATNRIDI
Sbjct: 299 QRTLMQLLAGMDGFETRGDVK-----------------------------IIGATNRIDI 329
Query: 560 LDPALLRPGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVK 619
LD ALLRPGR DR IE P P+EE RL IL++H+R + + +NL +IA L G +GA+++
Sbjct: 330 LDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLR 389
Query: 620 GVCTEAGMYALRERRVHVTQEDFEMAVAKV 649
+C EAGMYA+R R +T+EDF A+ KV
Sbjct: 390 AICMEAGMYAIRNERPAITREDFLSAIEKV 419
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%)
Query: 137 ELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKV 196
EL+ + + E + R ++ Q+ +VR L+ E + L+ +G VV +D +V+V+
Sbjct: 59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRS 118
Query: 197 HPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKMDV 240
+F+V +++ +D+ P R L +S + ++LP+ D
Sbjct: 119 SAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDA 162
>sp|Q9SSB4|PRS7B_ARATH 26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana
GN=RPT1B PE=2 SV=2
Length = 464
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 241/385 (62%), Gaps = 33/385 (8%)
Query: 268 KEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP-MDKKKVLVKVHPEGKFV 326
KE + + +L + +M++EE LL + +++ P + K +V + GK+V
Sbjct: 96 KESDTGLAPPNQWDLVSDKQMMQEEQPLLV---ATCTQIISPNTEDAKYVVDIKKIGKYV 152
Query: 327 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 386
V + D+ RV + + Y + LP K+DP V++M VE+ PD+TY +GG
Sbjct: 153 VGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKE 212
Query: 387 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 446
QI++I+EV+ELP+ HPE F LGI PKGVL YGPPG+GKTL+ARAVA+ T FIRV G
Sbjct: 213 QIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVG 272
Query: 447 SELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 506
SELVQK+IGEG+RMVRELF MAR I+F DEID+IG +R + G G D+EVQRTMLE+
Sbjct: 273 SELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEI 332
Query: 507 LNQLDGFEATKNIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVIMATNRIDILDPALLR 566
L QLDGF+A NI KV+MATNR DILDPALLR
Sbjct: 333 LYQLDGFDARGNI-----------------------------KVLMATNRPDILDPALLR 363
Query: 567 PGRIDRKIEFPPPNEEARLDILRIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 626
PGR+DRK+EF P+ E R I +IH+R M+ R I +A L P ++GA+++ VC EAG
Sbjct: 364 PGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAG 423
Query: 627 MYALRERRVHVTQEDFEMAVAKVMQ 651
MYA+ RR VT++DF AV KV++
Sbjct: 424 MYAIGARRKSVTEKDFLDAVNKVVK 448
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,861,559
Number of Sequences: 539616
Number of extensions: 10650204
Number of successful extensions: 56479
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 1960
Number of HSP's that attempted gapping in prelim test: 49224
Number of HSP's gapped (non-prelim): 7613
length of query: 665
length of database: 191,569,459
effective HSP length: 124
effective length of query: 541
effective length of database: 124,657,075
effective search space: 67439477575
effective search space used: 67439477575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)