RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15942
(211 letters)
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 102 bits (256), Expect = 5e-28
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 71 LCMRKAEWEGRGVAHLQLDTI-EFEAPSLYAIEKGLEFIQKVAQSGGVTYIHCKAGRSRS 129
LC EW+ GV L+L T+ P+L + KG++F K G Y+HCKAGRSRS
Sbjct: 44 LCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRS 103
Query: 130 ATLTACYLIKNYNMNPDDAVKYITYKRKQIRITKTEKAQIDQCYNI 175
AT+ A YLI+ +N +P++A++ I R I I ++ + + +
Sbjct: 104 ATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKE 149
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 93.2 bits (232), Expect = 2e-24
Identities = 21/88 (23%), Positives = 37/88 (42%)
Query: 76 AEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTAC 135
G+ +L +F P+ I++ ++ + + G +HC G R+ T+ AC
Sbjct: 50 HSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLAC 109
Query: 136 YLIKNYNMNPDDAVKYITYKRKQIRITK 163
YL+K + DA+ I R T
Sbjct: 110 YLVKERGLAAGDAIAEIRRLRPGSIETY 137
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 79.5 bits (196), Expect = 4e-19
Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 75 KAEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTA 134
+ + G+ L + + PS + L ++ + +HC G R+ T+ A
Sbjct: 52 LSILKKNGLQPLHIPIPDGGVPSD---SQFLTIMKWLLSEKEGNLVHCVGGIGRTGTILA 108
Query: 135 CYLIKNYNMNPDDAVKYITYKRKQIRITKTEKAQIDQCYNIYGS 178
YLI + + A+ + R T ++ + + + S
Sbjct: 109 SYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMFLLRVEGMRKS 152
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 80.8 bits (199), Expect = 3e-18
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 72 CMRKAEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSGGVTYIHCKAGRSRSAT 131
+ G H L + P+ ++ EF+ + G +H KAG R+ T
Sbjct: 229 MYDAKRFTDAGFDHHDLFFADGSTPTDAIVK---EFLDICENAEGAIAVHSKAGLGRTGT 285
Query: 132 LTACYLIKNYNMNPDDAVKYITYKRKQIRITK 163
L ACY++K+Y M + + ++ R I
Sbjct: 286 LIACYIMKHYRMTAAETIAWVRICRPGSVIGP 317
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 75.4 bits (186), Expect = 2e-17
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 102 EKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
E+ EFI++ Q G IHC+AG SRSAT+ YL+K+ M DA K++ KR I
Sbjct: 74 EEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIIS 132
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 74.6 bits (184), Expect = 3e-17
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 106 EFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
FI +GG +H AG SRS T+ Y++ + D ++ I R
Sbjct: 75 NFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIAN 129
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 74.2 bits (183), Expect = 3e-17
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 102 EKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
E+ EFI++ Q G IHC+AG SRSAT+ YL+K+ M DA K++ KR I
Sbjct: 70 EEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIIS 128
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 74.2 bits (183), Expect = 3e-17
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 64 LCIARDILCMRKAEWEGRGVAHLQLDTIEFEAPSLYAI-EKGLEFIQKVAQSGGVTYIHC 122
+CI ++I + +L LD + ++ EFI Q GG +H
Sbjct: 38 ICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHG 97
Query: 123 KAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
AG SRSA Y+++ + M DA Y+ +R I
Sbjct: 98 NAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCIN 135
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 73.8 bits (182), Expect = 5e-17
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 106 EFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
+FI + G +HC AG SRS TL Y++ + +DA+ + R
Sbjct: 74 KFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCAN 128
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 73.8 bits (182), Expect = 6e-17
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 106 EFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
++ + GG ++CK GRSRSA + YL+++ + D A + + R
Sbjct: 80 AAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAE 134
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 73.0 bits (180), Expect = 7e-17
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 106 EFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
EFI++ + GV +H AG SR+A + +L+ + + A + R I
Sbjct: 72 EFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSIC 126
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 73.0 bits (180), Expect = 7e-17
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 102 EKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
+FI K + G +H K G SRSA+ Y +K Y N D A Y+ +R +
Sbjct: 68 NDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTK 126
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 73.9 bits (182), Expect = 1e-16
Identities = 22/55 (40%), Positives = 28/55 (50%)
Query: 106 EFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
+ I V G T +HC AG SRSA L YL+K + M+ DA + R IR
Sbjct: 88 DHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIR 142
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 73.1 bits (179), Expect = 1e-16
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Query: 75 KAEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQ--------SGGVTYIHCKAGR 126
+ RG+ + P+ ++ L+ + +HC AG
Sbjct: 61 ATLVKSRGIDVHSWPFDDGAPPTRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGL 120
Query: 127 SRSATLTACYLIKNYNMNPDDAVKYITYKRK 157
R+ L A L++ N++ DA+ I KRK
Sbjct: 121 GRAPILVALALVEYGNVSALDAIALIREKRK 151
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 72.6 bits (179), Expect = 1e-16
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 102 EKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
+ +EFI + +H AG SRS T+T YL++ +++ +DA + K+ I
Sbjct: 72 PEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNIS 130
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 73.0 bits (179), Expect = 2e-16
Identities = 12/84 (14%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 75 KAEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKV--AQSGGVTYIHCKAGRSRSATL 132
+ G+ + ++ P +++ ++ +++ G + +HC G +R+ +
Sbjct: 71 GVHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYM 130
Query: 133 TACYLIKNYNMNPDDAVKYITYKR 156
YL+ + P +A+ R
Sbjct: 131 VCRYLMHTLGIAPQEAIDRFEKAR 154
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 72.2 bits (178), Expect = 2e-16
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 102 EKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
+ +E+I V G +H +AG SRSAT+ YL+ + ++A +++ +R I
Sbjct: 68 MEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIIS 126
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 73.6 bits (181), Expect = 2e-16
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 102 EKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
++ ++FI V + GG +H +AG SRS T+ YL+K +A YI +R +
Sbjct: 70 QEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVS 128
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 71.9 bits (177), Expect = 3e-16
Identities = 9/60 (15%), Positives = 22/60 (36%)
Query: 102 EKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIRI 161
++FI + Q I G +++ + +L+ ++ +A + I I
Sbjct: 74 PNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYPLIDI 133
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 72.4 bits (178), Expect = 4e-16
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 102 EKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
+ + I V++ G T +HC AG SRSATL YL+K +N+ +A ++ +R IR
Sbjct: 90 DTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIR 148
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 71.1 bits (175), Expect = 4e-16
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 64 LCIARDILCMRKAEWEGRGVAHLQLDTIEFEAPSLYAI-EKGLEFIQK-VAQSGGVTYIH 121
L + +EG G+ +L ++ + A + + +FI + ++Q GG +H
Sbjct: 32 LNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVH 91
Query: 122 CKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKR 156
C G SRSATL YL+ +++ +A+K + R
Sbjct: 92 CAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHR 126
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 72.4 bits (177), Expect = 6e-16
Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Query: 57 MTAAEFNLCIARDILCMRKAEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSGG 116
T E + ++L ++ G+ + P + + + +E + ++
Sbjct: 79 CTRGELSKYRVPNLL----DLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYR 134
Query: 117 VTYIHCKAGRSRSATLTACYLIK-NYNMNPDDAVKYITYKRKQIRIT 162
T IH G RS + AC L+ + ++P+ A+ + R I
Sbjct: 135 KTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQ 181
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 70.2 bits (172), Expect = 2e-15
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 106 EFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKRKQIR 160
I IH + G SRSATL Y++K +N++ + + + +I
Sbjct: 108 SIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKIN 162
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 71.7 bits (175), Expect = 3e-15
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 69 DILCMRKAEWEGRGVAHLQLDTIEFEAPSLYA-IEKGLEFIQK-VAQSGGVTYIHCKAGR 126
DI ++ + + H++ + +F+A L + + + K V ++GGVTY+H AG
Sbjct: 58 DISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGGVTYVHSTAGM 117
Query: 127 SRSATLTACYLIKNYNMNPDDAVKYITYKRKQ 158
R+ + Y+ +A K + KR
Sbjct: 118 GRAPAVALTYMFWVQGYKLMEAHKLLMSKRSC 149
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 68.5 bits (168), Expect = 8e-15
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 102 EKGLEFIQK-VAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKR 156
E+ +FI + +AQ G +HC+ G SRS TL YL+ M+ A+ + R
Sbjct: 101 ERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNR 156
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 69.0 bits (168), Expect = 1e-14
Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 75 KAEWEGRGVAHLQLDTIEF-EAPSLYAIEKGLEFIQKVAQSG--GVTYIHCKAGRSRSAT 131
+ + E G+ +++L E P+ E + ++ + + +HC G +R+
Sbjct: 98 RNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGF 157
Query: 132 LTACYLIKNYNMNPDDAVKYITYKRKQIRITKTEKAQIDQCYNIYGSADGSTRAPFRSFP 191
L +L++ + + + AV R I K + + + + YG + + P
Sbjct: 158 LICAFLVEKMDWSIEAAVATFAQARPPG-IYKGD--YLKELFRRYGDIEEAPPPP----L 210
Query: 192 LSKWQLE 198
L W E
Sbjct: 211 LPDWCFE 217
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 67.4 bits (165), Expect = 4e-14
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 106 EFIQK-VAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKR 156
FI + ++ +HC GRSRSATL YL+ + +M DA++ + R
Sbjct: 129 AFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNR 180
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 67.0 bits (164), Expect = 4e-14
Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Query: 106 EFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMN-----PDDAVKYITYKRKQIR 160
F+ K Q +HC AG +RS + YL+ + + R
Sbjct: 116 AFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFV 175
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 66.7 bits (163), Expect = 7e-14
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 106 EFIQK-VAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDAVKYITYKR 156
+I+ ++ G +HC G SRSATL +L+ NM +A++ + R
Sbjct: 121 RYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHR 172
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 65.1 bits (159), Expect = 1e-13
Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 5/60 (8%)
Query: 106 EFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPD-----DAVKYITYKRKQIR 160
F+ K Q +H AG +RS + YL+ + + R
Sbjct: 99 AFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFV 158
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 60.0 bits (145), Expect = 8e-12
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 71 LCMR---KAEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQ--SGGVTYIHCKAG 125
+C E G+ L + PS ++ L ++ + G +HC AG
Sbjct: 47 VCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAG 106
Query: 126 RSRSATLTACYLIKNYNMNPDDAVKYITYKRK 157
R+ L A LI+ M +DAV++I KR+
Sbjct: 107 LGRAPVLVALALIE-GGMKYEDAVQFIRQKRR 137
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 60.1 bits (145), Expect = 1e-11
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 75 KAEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQ--SGGVTYIHCKAGRSRSATL 132
E G+ L + PS ++ L ++ + G +HC AG R+ L
Sbjct: 75 TTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVL 134
Query: 133 TACYLIKNYNMNPDDAVKYITYKRKQIRITK 163
A LI+ M +DAV++I KR+ +K
Sbjct: 135 VALALIE-GGMKYEDAVQFIRQKRRGAFNSK 164
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 50.9 bits (121), Expect = 6e-08
Identities = 14/73 (19%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 79 EGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLI 138
E G+ + ++ + P+ I++ L F + + Q + + H +AG R+ +
Sbjct: 178 EAAGMRYFRIAATDHVWPTPENIDRFLAFYRTLPQDAWL-HFHSEAGVGRTTAFMVMTDM 236
Query: 139 -KNYNMNPDDAVK 150
KN +++ D +
Sbjct: 237 LKNPSVSLKDILY 249
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 50.7 bits (120), Expect = 8e-08
Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 9/146 (6%)
Query: 62 FNLCIARDILCMRKAEWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSG--GVTY 119
+NLC R A++ R Q + P L I+ E + + V
Sbjct: 62 YNLCAER---HYDTAKFNCR---VAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAA 115
Query: 120 IHCKAGRSRSATLTACYLIKNYN-MNPDDAVKYITYKRKQIRITKTEKAQIDQCYNIYGS 178
IHCKAG+ R+ + YL+ + +A+ + R + + T +Q Y
Sbjct: 116 IHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYVYYYSYL 175
Query: 179 ADGSTRAPFRSFPLSKWQLERTPLVH 204
+ K E P+
Sbjct: 176 LKNHLDYRPVALLFHKMMFETIPMFS 201
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 49.8 bits (118), Expect = 2e-07
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 79 EGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLI 138
E G+ + ++ + PS I++ + F + + + + + HC+AG R+ A Y +
Sbjct: 495 EKNGLHYYRIAATDHIWPSAANIDEFINFTRTMPANAWL-HFHCQAGAGRTTAYMAMYDM 553
Query: 139 -KNYNMNPDDAVK 150
KN +++ D +
Sbjct: 554 MKNPDVSLGDILS 566
Score = 44.0 bits (103), Expect = 2e-05
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 78 WEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACY- 136
+ G + +L + P ++K LEF + + + + + HC AG R+ +
Sbjct: 196 VKQHGANYFRLTLQDHFRPDDPDVDKFLEFYKSLPKDAWL-HYHCYAGMGRTTIFMVMHD 254
Query: 137 LIKNYNMNPDDAVKYITYKRKQIRITKTEKAQIDQCYNIYGSADGSTRAPF 187
++KN V + ++Q I + ++I YG R F
Sbjct: 255 ILKNAKD-----VSFDDIIQRQKLIGIVDLSEIPDKKKNYGRKAYIERYQF 300
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 49.6 bits (117), Expect = 2e-07
Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 95 APSLYAIEKGLEFIQKVAQSG--GVTYIHCKAGRSRSATLTACYLIKNYN-MNPDDAVKY 151
APSL+ + + V +HC GR+ S+ L I P AV+
Sbjct: 93 APSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRL 152
Query: 152 ITYKRKQIRITKTEKAQIDQCYNIYGSADGSTRAPFRSFPLSKWQLERTPLVH 204
+ KR I ++ + + + ++ AD R F+ + + P +
Sbjct: 153 LYAKRPGIGLSPSHRRYLGYMCDLL--ADKPYRPHFKPLTIKSITVSPVPFFN 203
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 43.9 bits (102), Expect = 1e-05
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 92 EFEAPSLYAIEKGLEFIQKV--AQSGGVTYIHCKAGRSRSATLTACYLIKNYNM-NPDDA 148
+ P+L + K ++ + + V IH K G+ R+ TL + +L+++ +A
Sbjct: 94 DHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEA 153
Query: 149 VKYITYKR 156
++Y +R
Sbjct: 154 LEYFGSRR 161
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.0 bits (93), Expect = 3e-04
Identities = 43/250 (17%), Positives = 76/250 (30%), Gaps = 83/250 (33%)
Query: 6 NNSKATEIMLGSQKNNALEASRVPMT------AAEFNLCIARDILCMRKAVAF------L 53
NN I G +K + + M I ++I + F L
Sbjct: 1667 NNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLL 1726
Query: 54 S------PAMTAAEFNLCIARDILCMRKAEWEGRGVAHLQLDTI-------EFEAPSLYA 100
S PA+T E D + +G+ + D E+ A L +
Sbjct: 1727 SATQFTQPALTLME--KAAFED--------LKSKGL--IPADATFAGHSLGEYAA--LAS 1772
Query: 101 IEKGLEF---IQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNM---NP--------D 146
+ + ++ V G + R NY M NP
Sbjct: 1773 LADVMSIESLVEVVFYRG--MTMQVAVPRDELGR-------SNYGMIAINPGRVAASFSQ 1823
Query: 147 DAVKYITYKRKQIRITKTEKAQIDQCYNIYGS----ADGSTRAPFRSFPLSKWQLER-TP 201
+A++Y+ +++ +I YN+ A G RA L+ T
Sbjct: 1824 EALQYVV---ERVGKRTGWLVEI-VNYNVENQQYVAA-GDLRA-----------LDTVTN 1867
Query: 202 LVHFFKVMKV 211
+++F K+ K+
Sbjct: 1868 VLNFIKLQKI 1877
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint
center for structural genomics, JCSG; HET: MSE; 1.40A
{Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Length = 157
Score = 36.9 bits (85), Expect = 0.001
Identities = 16/112 (14%), Positives = 39/112 (34%), Gaps = 21/112 (18%)
Query: 52 FLSPAMTAAEFNLCIARD----ILCMR-----------KAEWEGRGVAHLQLDTIEFEAP 96
S +F+L + + ++ + G+ ++ + ++++ P
Sbjct: 23 LSSGLPNEQQFSL-LKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIP-VDWQNP 80
Query: 97 SLYAIEKGLEFIQKVAQSGGVTYIHCKAGRSRSATLTACYLIKNYNMNPDDA 148
+ +E + G +HC A R++ Y +K NP+ A
Sbjct: 81 KVEDVEAFFAAMD--QHKGKDVLVHCLANY-RASAFAYLYQLK-QGQNPNMA 128
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 34.7 bits (79), Expect = 0.009
Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 12/105 (11%)
Query: 68 RDILCMRKAEW--------EGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKV--AQSGGV 117
R I+ + + + G+ Q + P + + + KV +
Sbjct: 35 RSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHP 94
Query: 118 TYIHCKAGRSRSATLTACYLIKNYNMNPDDAVK-YITYKRKQIRI 161
IHCK G+ R+ L C K Y + + R+
Sbjct: 95 VLIHCKRGKHRTGCLVGCLR-KLQKWCLTSIFDEYQRFAAAKARV 138
>3gm5_A Lactoylglutathione lyase and related lyases;
sheet-helix-sheet-sheet-sheet motif, isomerase; HET:
CIT; 2.00A {Thermoanaerobacter tengcongensis}
Length = 159
Score = 30.2 bits (68), Expect = 0.25
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 77 EWEGRGVAHLQLDTIEFEAPSLYAIEKGLEFIQKVAQSGG-VTYIHCKA 124
+ G G+ H+ + + KG++ IQK GG YI
Sbjct: 99 DKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLR 147
>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative,
PSI, midwest center for structural GE MCSG; 1.90A
{Bacillus cereus} SCOP: d.108.1.1
Length = 140
Score = 28.8 bits (64), Expect = 0.82
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 66 IARDILCMRKAEWEGRGVAHLQLDTIEFEAPSLY 99
+L + + +G + LD+ F+AP Y
Sbjct: 80 YGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFY 113
>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu
initiative, midwest center for structural genomics,
MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP:
d.108.1.1
Length = 152
Score = 28.8 bits (64), Expect = 0.93
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 66 IARDILCMRKAEWEGRGVAHLQLDTIEFEAPSLY 99
IA +L M + E RG +DT+ +A Y
Sbjct: 92 IAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTY 125
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 27.7 bits (62), Expect = 2.9
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Query: 105 LEFIQKVAQS-----GGVTYIHCKAGRSRSATLTACYLI 138
++ I V + +HC AG R+ T A I
Sbjct: 503 IDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNI 541
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 27.3 bits (61), Expect = 4.1
Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 105 LEFIQKVAQSG------GVTYIHCKAGRSRSATLTACYLI 138
++FI +V ++ G +HC AG R+ ++
Sbjct: 484 IDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV 523
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 27.4 bits (61), Expect = 4.1
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Query: 105 LEFIQKVAQS----GGVTYIHCKAGRSRSATLTAC 135
E I + + G T +H + G + L A
Sbjct: 505 FELINVIKEEALTRDGPTIVHDEYGAVSAGMLCAL 539
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel
beta sheet with flanking helices, structural genomics,
PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5
PDB: 2oz5_A*
Length = 296
Score = 27.2 bits (59), Expect = 4.4
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 107 FIQKVAQSGGVTYIHCKAGRSRSATLTACYL 137
+ + +G HC AG+ R+ + A L
Sbjct: 165 RVVTLLAAGRPVLTHCFAGKDRTGFVVALVL 195
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.132 0.393
Gapped
Lambda K H
0.267 0.0418 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,103,893
Number of extensions: 174014
Number of successful extensions: 371
Number of sequences better than 10.0: 1
Number of HSP's gapped: 366
Number of HSP's successfully gapped: 50
Length of query: 211
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 122
Effective length of database: 4,216,824
Effective search space: 514452528
Effective search space used: 514452528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)