BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy15946
         (251 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2KHP|A Chain A, Solution Structure Of Glutaredoxin From Brucella
           Melitensis
          Length = 92

 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 121 CLKVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERL 180
           C + K +L     +F++ D   + E + E +ER G +    PQIF+  VH+G  D +  L
Sbjct: 19  CARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTF--PQIFIGSVHVGGCDDLYAL 76

Query: 181 NESGELRRILKPYK 194
            + G+L  +LK  K
Sbjct: 77  EDEGKLDSLLKTGK 90



 Score = 36.6 bits (83), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 43 CLKVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIG 94
          C + K +L     +F++ D   + E + E +ER G +    PQIF+  VH+G
Sbjct: 19 CARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTF--PQIFIGSVHVG 68


>pdb|1WIK|A Chain A, Solution Structure Of The Picot Homology 2 Domain Of The
           Mouse Pkc-Interacting Cousin Of Thioredoxin Protein
          Length = 109

 Score = 37.7 bits (86), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 123 KVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERLNE 182
           ++ +IL +  V+++  D+    E +Q  K    ++    PQ++V G  +G  D ++ L +
Sbjct: 35  QILEILNSTGVEYETFDILEDEEVRQGLKTF--SNWPTYPQLYVRGDLVGGLDIVKELKD 92

Query: 183 SGELRRILKPYKSPDA 198
           +GEL  ILK    P +
Sbjct: 93  NGELLPILKGESGPSS 108


>pdb|1FOV|A Chain A, Glutaredoxin 3 From Escherichia Coli In The Fully Oxidized
           Form
          Length = 82

 Score = 37.4 bits (85), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 115 RDTYHRCLKVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDA 174
           ++T   C + K +L +  V F +  +  +   ++E  +R G     VPQIF++  HIG  
Sbjct: 8   KETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGR--TTVPQIFIDAQHIGGY 65

Query: 175 DAIERLNESGELRRILK 191
           D +  L+  G L  +LK
Sbjct: 66  DDLYALDARGGLDPLLK 82



 Score = 31.6 bits (70), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 37 RDTYHRCLKVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGTW 96
          ++T   C + K +L +  V F +  +  +   ++E  +R G     VPQIF++  HIG +
Sbjct: 8  KETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGR--TTVPQIFIDAQHIGGY 65

Query: 97 QE 98
           +
Sbjct: 66 DD 67


>pdb|2YAN|A Chain A, Crystal Structure Of The Second Glutaredoxin Domain Of
           Human Txnl2
 pdb|2YAN|B Chain B, Crystal Structure Of The Second Glutaredoxin Domain Of
           Human Txnl2
          Length = 105

 Score = 36.6 bits (83), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 123 KVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERLNE 182
           ++ +IL +  V+++  D+    E +Q  K    ++    PQ++V+G  +G  D ++ L E
Sbjct: 37  QILEILNSTGVEYETFDILEDEEVRQGLKAY--SNWPTYPQLYVKGELVGGLDIVKELKE 94

Query: 183 SGELRRILK 191
           +GEL  IL+
Sbjct: 95  NGELLPILR 103


>pdb|3D5J|A Chain A, Structure Of Yeast Grx2-C30s Mutant With Glutathionyl
           Mixed Disulfide
 pdb|3D5J|B Chain B, Structure Of Yeast Grx2-C30s Mutant With Glutathionyl
           Mixed Disulfide
          Length = 112

 Score = 36.2 bits (82), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGELRRILKP 192
           VP +++ G HIG    +E L ++G+L  ILKP
Sbjct: 78  VPNVYINGKHIGGNSDLETLKKNGKLAEILKP 109


>pdb|3D4M|A Chain A, Glutaredoxin 2 Oxidized Structure
          Length = 109

 Score = 35.8 bits (81), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGELRRILKP 192
           VP +++ G HIG    +E L ++G+L  ILKP
Sbjct: 75  VPNVYINGKHIGGNSDLETLKKNGKLAEILKP 106


>pdb|3CTF|A Chain A, Crystal Structure Of Oxidized Grx2
 pdb|3CTG|A Chain A, Crystal Structure Of Reduced Glutaredoxin 2
          Length = 129

 Score = 35.8 bits (81), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGELRRILKP 192
           VP +++ G HIG    +E L ++G+L  ILKP
Sbjct: 95  VPNVYINGKHIGGNSDLETLKKNGKLAEILKP 126


>pdb|3GRX|A Chain A, Nmr Structure Of Escherichia Coli Glutaredoxin
           3-Glutathione Mixed Disulfide Complex, 20 Structures
          Length = 82

 Score = 34.3 bits (77), Expect = 0.072,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 123 KVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERLNE 182
           + K +L +  V F +  +  +   ++E  +R G     VPQIF++  HIG  D +  L+ 
Sbjct: 16  RAKALLSSKGVSFQELPIDGNAAKREEMIKRSGR--TTVPQIFIDAQHIGGYDDLYALDA 73

Query: 183 SGELRRILK 191
            G L  +LK
Sbjct: 74  RGGLDPLLK 82



 Score = 28.1 bits (61), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 45 KVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGTWQE 98
          + K +L +  V F +  +  +   ++E  +R G     VPQIF++  HIG + +
Sbjct: 16 RAKALLSSKGVSFQELPIDGNAAKREEMIKRSGR--TTVPQIFIDAQHIGGYDD 67


>pdb|2KLX|A Chain A, Solution Structure Of Glutaredoxin From Bartonella
           Henselae Str. Houston
          Length = 89

 Score = 32.7 bits (73), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 121 CLKVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERL 180
           C + + +L    VK+ D D   S   +QE  +R        PQIF+   H+G  D +  L
Sbjct: 19  CKRARDLLDKKGVKYTDIDA--STSLRQEMVQR-ANGRNTFPQIFIGDYHVGGCDDLYAL 75

Query: 181 NESGELRRILK 191
              G+L  +L+
Sbjct: 76  ENKGKLDSLLQ 86


>pdb|2WUL|A Chain A, Crystal Structure Of The Human Glutaredoxin 5 With Bound
           Glutathione In An Fes Cluster
 pdb|2WUL|B Chain B, Crystal Structure Of The Human Glutaredoxin 5 With Bound
           Glutathione In An Fes Cluster
 pdb|2WUL|C Chain C, Crystal Structure Of The Human Glutaredoxin 5 With Bound
           Glutathione In An Fes Cluster
 pdb|2WUL|D Chain D, Crystal Structure Of The Human Glutaredoxin 5 With Bound
           Glutathione In An Fes Cluster
          Length = 118

 Score = 31.2 bits (69), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 124 VKQILRTHLVK-FDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERLNE 182
           V QILR H V+ +   +V    E +Q  K+   ++   +PQ+++ G  +G  D + ++++
Sbjct: 41  VVQILRLHGVRDYAAYNVLDDPELRQGIKDY--SNWPTIPQVYLNGEFVGGCDILLQMHQ 98

Query: 183 SGELRRILK 191
           +G+L   LK
Sbjct: 99  NGDLVEELK 107


>pdb|3H8Q|A Chain A, Crystal Structure Of Glutaredoxin Domain Of Human
           Thioredoxin Reductase 3
 pdb|3H8Q|B Chain B, Crystal Structure Of Glutaredoxin Domain Of Human
           Thioredoxin Reductase 3
          Length = 114

 Score = 31.2 bits (69), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 156 TDVINVPQIFVEGVHIGDADAIERLNESGELRRILKPYKSPDA 198
           T+   VP IFV  VH+G  D   +  +SG L+++L+   + DA
Sbjct: 66  TNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLAYDA 108


>pdb|3QMX|A Chain A, X-Ray Crystal Structure Of Synechocystis Sp. Pcc 6803
           Glutaredoxin A
          Length = 99

 Score = 30.8 bits (68), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query: 160 NVPQIFVEGVHIGDADAIERLNESGELRRIL 190
           ++PQIF++  HIG  D I  L+ +G+L  +L
Sbjct: 67  SLPQIFIDDQHIGGCDDIYALDGAGKLDPLL 97


>pdb|1RQX|A Chain A, Crystal Structure Of Acc Deaminase Complexed With
           Inhibitor
 pdb|1RQX|B Chain B, Crystal Structure Of Acc Deaminase Complexed With
           Inhibitor
 pdb|1RQX|C Chain C, Crystal Structure Of Acc Deaminase Complexed With
           Inhibitor
 pdb|1RQX|D Chain D, Crystal Structure Of Acc Deaminase Complexed With
           Inhibitor
 pdb|1TYZ|A Chain A, Crystal Structure Of 1-aminocyclopropane-1-carboyxlate
           Deaminase From Pseudomonas
 pdb|1TYZ|B Chain B, Crystal Structure Of 1-aminocyclopropane-1-carboyxlate
           Deaminase From Pseudomonas
 pdb|1TYZ|C Chain C, Crystal Structure Of 1-aminocyclopropane-1-carboyxlate
           Deaminase From Pseudomonas
 pdb|1TYZ|D Chain D, Crystal Structure Of 1-aminocyclopropane-1-carboyxlate
           Deaminase From Pseudomonas
 pdb|1TZ2|A Chain A, Crystal Structure Of 1-Aminocyclopropane-1-Carboyxlate
           Deaminase Complexed With Acc
 pdb|1TZ2|B Chain B, Crystal Structure Of 1-Aminocyclopropane-1-Carboyxlate
           Deaminase Complexed With Acc
 pdb|1TZ2|C Chain C, Crystal Structure Of 1-Aminocyclopropane-1-Carboyxlate
           Deaminase Complexed With Acc
 pdb|1TZ2|D Chain D, Crystal Structure Of 1-Aminocyclopropane-1-Carboyxlate
           Deaminase Complexed With Acc
 pdb|1TZJ|A Chain A, Crystal Structure Of 1-Aminocyclopropane-1-Carboxylate
           Deaminase Complexed With D-Vinyl Glycine
 pdb|1TZJ|B Chain B, Crystal Structure Of 1-Aminocyclopropane-1-Carboxylate
           Deaminase Complexed With D-Vinyl Glycine
 pdb|1TZJ|C Chain C, Crystal Structure Of 1-Aminocyclopropane-1-Carboxylate
           Deaminase Complexed With D-Vinyl Glycine
 pdb|1TZJ|D Chain D, Crystal Structure Of 1-Aminocyclopropane-1-Carboxylate
           Deaminase Complexed With D-Vinyl Glycine
 pdb|1TZK|A Chain A, Crystal Structure Of
           1-Aminocyclopropane-1-Carboxylate-Deaminase Complexed
           With Alpha-Keto-Butyrate
 pdb|1TZK|B Chain B, Crystal Structure Of
           1-Aminocyclopropane-1-Carboxylate-Deaminase Complexed
           With Alpha-Keto-Butyrate
 pdb|1TZK|C Chain C, Crystal Structure Of
           1-Aminocyclopropane-1-Carboxylate-Deaminase Complexed
           With Alpha-Keto-Butyrate
 pdb|1TZK|D Chain D, Crystal Structure Of
           1-Aminocyclopropane-1-Carboxylate-Deaminase Complexed
           With Alpha-Keto-Butyrate
 pdb|1TZM|A Chain A, Crystal Structure Of Acc Deaminase Complexed With
           Substrate Analog B- Chloro-d-alanine
 pdb|1TZM|B Chain B, Crystal Structure Of Acc Deaminase Complexed With
           Substrate Analog B- Chloro-d-alanine
 pdb|1TZM|C Chain C, Crystal Structure Of Acc Deaminase Complexed With
           Substrate Analog B- Chloro-d-alanine
 pdb|1TZM|D Chain D, Crystal Structure Of Acc Deaminase Complexed With
           Substrate Analog B- Chloro-d-alanine
          Length = 338

 Score = 30.4 bits (67), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 21/122 (17%)

Query: 83  VPQIFVEG----VHIGTWQEKEAGKIVMYSTTMGIVRDTYHRCLKVKQILRTHLVKFDDK 138
           +P+   +G    V IG  Q  +  ++   +  +G+      +C+ V++    + V +   
Sbjct: 59  IPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGM------KCVLVQE----NWVNY--S 106

Query: 139 DVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERLNESGELRRILKPYKSPDA 198
           D    R    +    LG DV  VP  F  G      DA+E +  +G      KPY  P  
Sbjct: 107 DAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGG-----KPYAIPAG 161

Query: 199 CT 200
           C+
Sbjct: 162 CS 163


>pdb|1NM3|A Chain A, Crystal Structure Of Heamophilus Influenza Hybrid-prx5
 pdb|1NM3|B Chain B, Crystal Structure Of Heamophilus Influenza Hybrid-prx5
          Length = 241

 Score = 30.4 bits (67), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 121 CLKVKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIER 179
           C K KQ+L    + F++  + +  +       R  +    VPQ+F+ G HIG +D +E+
Sbjct: 183 CAKAKQLLHDKGLSFEE--IILGHDATI-VSVRAVSGRTTVPQVFIGGKHIGGSDDLEK 238


>pdb|1QFN|A Chain A, Glutaredoxin-1-Ribonucleotide Reductase B1 Mixed
          Disulfide Bond
 pdb|1GRX|A Chain A, Structure Of E. Coli Glutaredoxin
          Length = 85

 Score = 30.0 bits (66), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 20/29 (68%)

Query: 68 TQQEFKERLGTDVINVPQIFVEGVHIGTW 96
          T+++ +++ G  V  VPQIFV+  HIG +
Sbjct: 44 TKEDLQQKAGKPVETVPQIFVDQQHIGGY 72



 Score = 29.3 bits (64), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 146 TQQEFKERLGTDVINVPQIFVEGVHIG 172
           T+++ +++ G  V  VPQIFV+  HIG
Sbjct: 44  TKEDLQQKAGKPVETVPQIFVDQQHIG 70


>pdb|2FLS|A Chain A, Crystal Structure Of Human Glutaredoxin 2 Complexed With
           Glutathione
          Length = 132

 Score = 29.6 bits (65), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGEL 186
           VP+IFV G  IG A    RL++ G+L
Sbjct: 89  VPRIFVNGTFIGGATDTHRLHKEGKL 114


>pdb|1EGO|A Chain A, Nmr Structure Of Oxidized Escherichia Coli Glutaredoxin:
          Comparison With Reduced E. Coli Glutaredoxin And
          Functionally Related Proteins
 pdb|1EGR|A Chain A, Sequence-Specific 1h N.M.R. Assignments And
          Determination Of The Three-Dimensional Structure Of
          Reduced Escherichia Coli Glutaredoxin
          Length = 85

 Score = 29.6 bits (65), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 20/29 (68%)

Query: 68 TQQEFKERLGTDVINVPQIFVEGVHIGTW 96
          T+++ +++ G  V  VPQIFV+  HIG +
Sbjct: 44 TKEDLQQKAGKPVETVPQIFVDQQHIGGY 72



 Score = 29.3 bits (64), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 146 TQQEFKERLGTDVINVPQIFVEGVHIG 172
           T+++ +++ G  V  VPQIFV+  HIG
Sbjct: 44  TKEDLQQKAGKPVETVPQIFVDQQHIG 70


>pdb|2CQ9|A Chain A, Solution Structure Of Rsgi Ruh-044, An N-Terminal Domain
           Of Glutaredoxin 2 From Human Cdna
          Length = 130

 Score = 29.6 bits (65), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGEL 186
           VP+IFV G  IG A    RL++ G+L
Sbjct: 81  VPRIFVNGTFIGGATDTHRLHKEGKL 106


>pdb|2HT9|A Chain A, The Structure Of Dimeric Human Glutaredoxin 2
 pdb|2HT9|B Chain B, The Structure Of Dimeric Human Glutaredoxin 2
          Length = 146

 Score = 29.6 bits (65), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGEL 186
           VP+IFV G  IG A    RL++ G+L
Sbjct: 103 VPRIFVNGTFIGGATDTHRLHKEGKL 128


>pdb|3RHB|A Chain A, Crystal Structure Of The Apo Form Of Glutaredoxin C5 From
           Arabidopsis Thaliana
 pdb|3RHC|A Chain A, Crystal Structure Of The Holo Form Of Glutaredoxin C5 From
           Arabidopsis Thaliana
 pdb|3RHC|B Chain B, Crystal Structure Of The Holo Form Of Glutaredoxin C5 From
           Arabidopsis Thaliana
          Length = 113

 Score = 29.6 bits (65), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 148 QEFKERLGTDVINVPQIFVEGVHIGDADAIERLNESGELRRIL 190
           Q+  ERL T    VP +FV G HIG      +LN  G+L  +L
Sbjct: 62  QKVLERL-TGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELML 103


>pdb|3IPZ|A Chain A, Crystal Structure Of Arabidopsis Monothiol Glutaredoxin
           Atgr
          Length = 109

 Score = 29.3 bits (64), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 124 VKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERLNES 183
           V QIL+   V F+D ++  +   +Q  KE   ++    PQ+++ G   G  D      ++
Sbjct: 39  VVQILKNLNVPFEDVNILENEMLRQGLKEY--SNWPTFPQLYIGGEFFGGCDITLEAFKT 96

Query: 184 GELRR 188
           GEL+ 
Sbjct: 97  GELQE 101


>pdb|1JHB|A Chain A, Human Glutaredoxin In Fully Reduced Form, Nmr, 20
           Structures
          Length = 106

 Score = 28.5 bits (62), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 12/97 (12%)

Query: 100 EAGKIVMYSTTMGIVRDTYHRCLKVKQIL-----RTHLVKFDDKDVFMSRETQQEFKERL 154
           + GK+V++      ++ T   C + ++IL     +  L++F D          Q++ ++L
Sbjct: 11  QPGKVVVF------IKPTCPYCRRAQEILSQLPIKQGLLEFVDITATNHTNEIQDYLQQL 64

Query: 155 GTDVINVPQIFVEGVHIGDADAIERLNESGELRRILK 191
            T    VP++F+    IG    +  L +SGEL   LK
Sbjct: 65  -TGARTVPRVFIGKDCIGGCSDLVSLQQSGELLTRLK 100


>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
           Complex With Ca2+ And Amppnp
          Length = 494

 Score = 28.5 bits (62), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 85  QIFVEGVHIGTWQEKEAG---KIVMYSTTMGIVRDTYHRCLKVKQIL-----RTHLVKFD 136
           ++F E +H   + E +A    K V+   T     +  HR LK + +L     +  L+K  
Sbjct: 122 ELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIV 181

Query: 137 DKDVFMSRETQQEFKERLGTDVINVPQIF 165
           D  +    E Q++ KERLGT     P++ 
Sbjct: 182 DFGLSAVFENQKKMKERLGTAYYIAPEVL 210


>pdb|2LKU|A Chain A, Solution Structure Of Reduced Poplar Apo Grxs14
          Length = 109

 Score = 28.5 bits (62), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 124 VKQILRTHLVKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERLNES 183
           V QIL++    F+  ++  +   +Q  KE   +     PQ++++G   G  D      +S
Sbjct: 39  VVQILKSLNAPFESVNILENELLRQGLKEY--SSWPTFPQLYIDGEFFGGCDITVEAYKS 96

Query: 184 GELRR 188
           GEL+ 
Sbjct: 97  GELQE 101


>pdb|1YKA|A Chain A, Solution Structure Of Grx4, A Monothiol Glutaredoxin From
           E. Coli
          Length = 115

 Score = 28.5 bits (62), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 6/43 (13%)

Query: 162 PQIFVEGVHIGDADAIERLNESGELRRILKP----YKS--PDA 198
           PQ++V+G  +G  D +  + + GEL++++K     YKS  PDA
Sbjct: 72  PQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYKSEEPDA 114


>pdb|2WCI|A Chain A, Structure Of E. Coli Monothiol Glutaredoxin Grx4 Homodimer
 pdb|2WCI|B Chain B, Structure Of E. Coli Monothiol Glutaredoxin Grx4 Homodimer
          Length = 135

 Score = 28.1 bits (61), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 6/43 (13%)

Query: 162 PQIFVEGVHIGDADAIERLNESGELRRILKP----YKS--PDA 198
           PQ++V+G  +G  D +  + + GEL++++K     YKS  PDA
Sbjct: 92  PQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYKSEEPDA 134


>pdb|3FZ9|A Chain A, Crystal Structure Of Poplar Glutaredoxin S12 In Complex
           With Glutathione
 pdb|3FZA|A Chain A, Crystal Structure Of Poplar Glutaredoxin S12 In Complex
           With Glutathione And Beta-Mercaptoethanol
          Length = 112

 Score = 27.7 bits (60), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 148 QEFKERLGTDVINVPQIFVEGVHIGDADAIERLNESGELRRIL 190
           Q+  ERL T    VP +F+ G HIG      +L   GEL  +L
Sbjct: 61  QKVLERL-TGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLL 102


>pdb|3GX8|A Chain A, Structural And Biochemical Characterization Of Yeast
           Monothiol Glutaredoxin Grx5
          Length = 121

 Score = 27.3 bits (59), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 133 VKFDDKDVFMSRETQQEFKERLGTDVINVPQIFVEGVHIGDADAIERLNESGELRRILK 191
            KF   +V    E ++  KE   ++   +PQ++V    IG  D I  +  SGEL  +L+
Sbjct: 49  AKFAAYNVLEDPELREGIKEF--SEWPTIPQLYVNKEFIGGCDVITSMARSGELADLLE 105


>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
           With The Reduced C-Terminal End
 pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
           With The Reduced C-Terminal End
 pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
           Schistosoma Mansoni
 pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
           In Complex With Gsh
 pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
           In Complex With Nadph
          Length = 598

 Score = 27.3 bits (59), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGELRRILKPYK 194
           VPQ+FV G  IGD+  + +   + EL  I+   K
Sbjct: 72  VPQMFVRGKFIGDSQTVLKYYSNDELAGIVNESK 105


>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
           Reductase (Smtgr)
          Length = 596

 Score = 27.3 bits (59), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGELRRILKPYK 194
           VPQ+FV G  IGD+  + +   + EL  I+   K
Sbjct: 72  VPQMFVRGKFIGDSQTVLKYYSNDELAGIVNESK 105


>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
           Reductase From Schistosoma Mansoni In Complex With
           Auranofin
          Length = 598

 Score = 27.3 bits (59), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 161 VPQIFVEGVHIGDADAIERLNESGELRRILKPYK 194
           VPQ+FV G  IGD+  + +   + EL  I+   K
Sbjct: 72  VPQMFVRGKFIGDSQTVLKYYSNDELAGIVNESK 105


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.325    0.139    0.432 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,672,534
Number of Sequences: 62578
Number of extensions: 318188
Number of successful extensions: 1004
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 72
length of query: 251
length of database: 14,973,337
effective HSP length: 96
effective length of query: 155
effective length of database: 8,965,849
effective search space: 1389706595
effective search space used: 1389706595
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)