RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1595
(147 letters)
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 54.1 bits (129), Expect = 4e-11
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 58 HFGSSLNPTDIKEGDDVYFECQVSANPRAH-RLLWFHNDKEIHHNVTGGIILSNISLVLQ 116
F T++ EG F C+V A+ + + ++ L +
Sbjct: 3 RFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTIN 62
Query: 117 KVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+V GEY+ A N+ G + + L V
Sbjct: 63 RVKGDDKGEYTVRAKNSYGT-KEEIVFLNVT 92
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 53.4 bits (127), Expect = 5e-11
Identities = 18/88 (20%), Positives = 25/88 (28%), Gaps = 5/88 (5%)
Query: 65 PTDI--KEGDDVYFECQVSANPRAHRLLWFHNDKEI---HHNVTGGIILSNISLVLQKVS 119
P + +G V C V + L L+ V
Sbjct: 3 PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVE 62
Query: 120 RQSAGEYSCMAINTEGRGASQPIILAVK 147
R AG Y C + SQP+ L V+
Sbjct: 63 RSDAGRYWCQVEDGGETEISQPVWLTVE 90
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 52.8 bits (126), Expect = 9e-11
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 63 LNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSRQS 122
+K+G DV C+V+ P + ++W HN K + G +++ LV++ V
Sbjct: 10 EKVIVVKQGQDVTIPCKVTGLPAPN-VVWSHNAKPLSG---GRATVTDSGLVIKGVKNGD 65
Query: 123 AGEYSCMAINTEGRGASQPIILAV 146
G Y C A N G ++ V
Sbjct: 66 KGYYGCRATNEHGD-KYFETLVQV 88
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 53.0 bits (126), Expect = 9e-11
Identities = 17/79 (21%), Positives = 30/79 (37%)
Query: 57 IHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQ 116
+ F ++ P + KEG+D C V ++ + I I+LSN L ++
Sbjct: 2 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 61
Query: 117 KVSRQSAGEYSCMAINTEG 135
+ + G Y C
Sbjct: 62 GIKKTDEGTYRCEGRILAR 80
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 52.9 bits (126), Expect = 1e-10
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 4/92 (4%)
Query: 58 HFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILS--NISLVL 115
++ G+ V +V+ W K+I + + S L +
Sbjct: 2 QIIQFPEDQKVRAGESVELFGKVTGTQPIT-CTWMKFRKQIQESEHMKVENSENGSKLTI 60
Query: 116 QKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
++ G Y+ + N G + L V
Sbjct: 61 LAARQEHCGCYTLLVENKLGS-RQAQVNLTVV 91
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 97
Score = 52.2 bits (124), Expect = 2e-10
Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Query: 51 FVPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSN 110
+ P +L P + V C+ ANP A + + + +++
Sbjct: 3 YGPVFEEQPAHTLFPEG-SAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAG 61
Query: 111 ISLVLQKVSRQSAGEYSCMAINTEGRGASQPIIL 144
++ V + AG Y C+A N G S+ L
Sbjct: 62 DLVISNPVKAKDAGSYQCVATNARGTVVSREASL 95
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 51.8 bits (123), Expect = 3e-10
Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 58 HFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQK 117
+ + T+ G D+ + C S PR N I +S L K
Sbjct: 3 DWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNR---IEVSGGELRFSK 59
Query: 118 VSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+ + +G Y C+A N G L V+
Sbjct: 60 LVLEDSGMYQCVAENKHGT-VYASAELTVQ 88
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR
{Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 51.3 bits (122), Expect = 4e-10
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 5/82 (6%)
Query: 68 IKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGII---LSNISLVLQKVSRQSAG 124
+ + V F C NP + W N KE G + SL+++ V G
Sbjct: 17 VPAANTVKFRCPAGGNPMPT-MRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKG 75
Query: 125 EYSCMAINTEGRGASQPIILAV 146
Y+C+ N G + L V
Sbjct: 76 NYTCVVENEYGS-INHTYHLDV 96
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 91
Score = 50.2 bits (119), Expect = 9e-10
Identities = 14/81 (17%), Positives = 23/81 (28%), Gaps = 2/81 (2%)
Query: 68 IKEGDDVYFECQVSANPRAH-RLLWFHNDKEIHHNVTGGIILSNISLVLQKVSRQSAGEY 126
+ EG+ F C P L + + V G Y
Sbjct: 11 VYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNY 70
Query: 127 SCMAINTEGRGASQPIILAVK 147
S + N+EG+ L ++
Sbjct: 71 SVVVENSEGK-QEAEFTLTIQ 90
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 98
Score = 49.1 bits (116), Expect = 3e-09
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
Query: 58 HFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNIS--LVL 115
+ + +G D +F +V P + + K + + LV+
Sbjct: 6 KIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVI 65
Query: 116 QKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+ V+ + + AIN G S L V+
Sbjct: 66 RDVTGEDSASIMVKAINIAGE-TSSHAFLLVQ 96
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 48.3 bits (114), Expect = 5e-09
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 50 HFVPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILS 109
+ P + F + T G V EC NP + + + S
Sbjct: 2 QYAPSIKAKFPAD---TYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK-----WLSS 53
Query: 110 NISLVLQKVSRQSAGEYSCMAINTEGR 136
L +Q V + G Y C A N +GR
Sbjct: 54 EPLLHIQNVDFEDEGTYECEAENIKGR 80
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 47.5 bits (112), Expect = 1e-08
Identities = 13/81 (16%), Positives = 24/81 (29%)
Query: 56 VIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVL 115
+I L ++ G+ +FE ++S + + L+L
Sbjct: 1 LIEVEKPLYGVEVFVGETAHFEIELSEPDVHGQWKLKGQPLTASPDCEIIEDGKKHILIL 60
Query: 116 QKVSRQSAGEYSCMAINTEGR 136
GE S A N +
Sbjct: 61 HNCQLGMTGEVSFQAANAKSA 81
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 47.6 bits (112), Expect = 1e-08
Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 64 NPTDIKEGDDVYFECQVSANPRAHRLLWFHNDK---EIHHNVTGGIILSNISLVLQKVSR 120
K GD C +NP + + + +T S L+ +
Sbjct: 11 KDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLP 70
Query: 121 QSAGEYSCMAINTEGRGASQPIILAV 146
+ G Y+C N G+ + L V
Sbjct: 71 EDEGVYTCEVDNGVGKPQKHSLKLTV 96
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId:
9103]}
Length = 102
Score = 47.2 bits (111), Expect = 2e-08
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Query: 53 PRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSN-- 110
P V +F ++ ++ EG F+C+V P + + ++
Sbjct: 5 PHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGN 64
Query: 111 ISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
SL + +V +Y+C A+N+ G A+ L V+
Sbjct: 65 CSLTISEVCGDDDAKYTCKAVNSLGE-ATCTAELLVE 100
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 46.1 bits (108), Expect = 3e-08
Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Query: 56 VIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVL 115
++ ++ G DV F C + A+ L+W + + N L +
Sbjct: 2 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS---RAMDFNGILTI 58
Query: 116 QKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+ V AG Y C N L V+
Sbjct: 59 RNVQPSDAGTYVCTGSNMFAM-DQGTATLHVQ 89
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 46.0 bits (108), Expect = 4e-08
Identities = 21/98 (21%), Positives = 30/98 (30%), Gaps = 5/98 (5%)
Query: 52 VPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILS-- 109
VP V S +N T G V C P + + +
Sbjct: 2 VPPTVQARQSIVNAT-ANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSD 60
Query: 110 -NISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAV 146
+ L ++ V + EY C+A N G I L V
Sbjct: 61 DSSELTIRNVDKNDEAEYVCIAENKAGE-QDASIHLKV 97
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 46.2 bits (108), Expect = 4e-08
Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 58 HFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSN----ISL 113
HF + ++ G F+C A LW + + S+ S
Sbjct: 4 HF-LRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASF 62
Query: 114 VLQKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+ +++ AG+Y CM G G S L VK
Sbjct: 63 NVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK 96
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 45.4 bits (106), Expect = 8e-08
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 5/93 (5%)
Query: 53 PRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSN-I 111
P + +E + EC + N + + W + K + + +
Sbjct: 3 PVLKDQ----PAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEG 58
Query: 112 SLVLQKVSRQSAGEYSCMAINTEGRGASQPIIL 144
SLV + G Y C A G +S+ I
Sbjct: 59 SLVFLRPQASDEGHYQCFAETPAGVASSRVISF 91
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 45.2 bits (106), Expect = 1e-07
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
Query: 57 IHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGII--LSNISLV 114
I L T G+ V EC+VS + + + I L+
Sbjct: 1 IMVTKQLEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILI 60
Query: 115 LQKVSRQSAGEYSCMAINTEG 135
++ ++ A EYS M +
Sbjct: 61 IEGATKADAAEYSVMTTGGQS 81
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 44.2 bits (103), Expect = 2e-07
Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 65 PTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSRQSAG 124
+ EG ++ C N ++++++ + + + + + + + + +G
Sbjct: 9 AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHN------ISITNATVEDSG 62
Query: 125 EYSCMAINTEGRGASQPIILAVK 147
Y C + S+P+ + V
Sbjct: 63 TYYCTGKVWQLDYESEPLNITVI 85
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 44.2 bits (103), Expect = 2e-07
Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 6/96 (6%)
Query: 53 PRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRA-HRLLWFHNDKEIHHNVTGGIILSNI 111
P+++ ++ IK G E P + + + S
Sbjct: 3 PKIL----TASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTT 58
Query: 112 SLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
S+ R +G Y N G + V+
Sbjct: 59 SIFFPSAKRADSGNYKLKVKNELGE-DEAIFEVIVQ 93
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 43.8 bits (102), Expect = 3e-07
Identities = 12/80 (15%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 68 IKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSRQSAGEYS 127
+EG+ + C + ++ +F N K + + + + +G+Y
Sbjct: 12 FQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSI------PQANHSHSGDYH 65
Query: 128 CMAINTEGRGASQPIILAVK 147
C +S+P+ + V+
Sbjct: 66 CTGNIGYTLYSSKPVTITVQ 85
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 43.1 bits (100), Expect = 7e-07
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 10/99 (10%)
Query: 58 HFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIIL--------S 109
+ + I EG+ C+ + P W+ + G
Sbjct: 4 RVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQG 63
Query: 110 NISLVLQKVS-RQSAGEYSCMAINTEGRGASQPIILAVK 147
L ++ ++ G+Y C +++G I L V+
Sbjct: 64 RSELHIENLNMEADPGQYRCNGTSSKGS-DQAIITLRVR 101
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 42.2 bits (98), Expect = 1e-06
Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 68 IKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSRQSAGEYS 127
KE D ++ C N H++ + N K+ + N + K + + +G Y
Sbjct: 14 FKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHH------NSDFHIPKATLKDSGSYF 67
Query: 128 CMAINTEGRGASQPIILAVK 147
C + +S+ + + +
Sbjct: 68 CRGLVGSKNVSSETVNITIT 87
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 41.8 bits (97), Expect = 2e-06
Identities = 10/79 (12%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Query: 59 FGSSLNPT-DIKEGDDVYFECQVS-ANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQ 116
F L P + +G + +++ + L + I + +L +
Sbjct: 8 FQKKLEPAYQVSKGHKIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTIS 67
Query: 117 KVSRQSAGEYSCMAINTEG 135
+ S Y C+ +
Sbjct: 68 QCSLADDAAYQCVVGGEKC 86
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 41.9 bits (97), Expect = 2e-06
Identities = 17/87 (19%), Positives = 22/87 (25%), Gaps = 7/87 (8%)
Query: 68 IKEGDDVYFECQVSANPRAHRLLWFHNDKEI-------HHNVTGGIILSNISLVLQKVSR 120
I GD EC V + W + + +S L + V
Sbjct: 15 ILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLP 74
Query: 121 QSAGEYSCMAINTEGRGASQPIILAVK 147
G Y C A S L V
Sbjct: 75 NDNGSYRCSANFQSNLIESHSTTLYVT 101
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 41.1 bits (95), Expect = 4e-06
Identities = 14/85 (16%), Positives = 22/85 (25%), Gaps = 1/85 (1%)
Query: 52 VPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNI 111
PR + GD V C + + + K +
Sbjct: 2 APRRCPAQEVARGVLTSLPGDSVTLTCPGVEPE-DNATVHWVLRKPAAGSHPSRWAGMGR 60
Query: 112 SLVLQKVSRQSAGEYSCMAINTEGR 136
L+L+ V +G YSC
Sbjct: 61 RLLLRSVQLHDSGNYSCYRAGRPAG 85
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 40.8 bits (94), Expect = 4e-06
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Query: 61 SSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSR 120
S K G +C +N W + + ++ +L++ +S
Sbjct: 2 GSYRQHFFKHGGTAELKCSQKSNLARVF--WKFQNGVLKAESPKYGLMGRKNLLIFNLSE 59
Query: 121 QSAGEYSCMAINTEGRGASQPIILAV 146
+G Y C++ + + ++A
Sbjct: 60 GDSGVYQCLSEE-RVKNKTVFQVVAK 84
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 40.2 bits (93), Expect = 8e-06
Identities = 10/91 (10%), Positives = 23/91 (25%), Gaps = 5/91 (5%)
Query: 53 PRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFH-NDKEIHHNVTGGIILSNI 111
RV + P+ G + CQV +L ++ + +
Sbjct: 5 ERVELA----PLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEV 60
Query: 112 SLVLQKVSRQSAGEYSCMAINTEGRGASQPI 142
+ + ++SC +
Sbjct: 61 TTTVLVRRDHHGAQFSCRTELDLRPQGLELF 91
Score = 24.4 bits (52), Expect = 4.2
Identities = 5/33 (15%), Positives = 8/33 (24%)
Query: 8 NVTVSYVPFKPSADDDNSKLTCRAENTLIANSS 40
D ++ +CR E L
Sbjct: 56 EPAEVTTTVLVRRDHHGAQFSCRTELDLRPQGL 88
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 40.0 bits (92), Expect = 1e-05
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 16/107 (14%)
Query: 53 PRVVIHFGSSLNPTDIKEGDDVYFECQVS-ANPRAH-RLLWFHNDKEIH----HNVTGGI 106
PR VI +L PT + G EC+V P L F ++ +H
Sbjct: 2 PRQVIL---TLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAP 58
Query: 107 ILSNISLVLQKVSRQSAGEYSCMAINTEG-------RGASQPIILAV 146
+ + +SC+A+ S P +L +
Sbjct: 59 QEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFHKHSAPKMLEI 105
Score = 23.8 bits (50), Expect = 6.0
Identities = 4/36 (11%), Positives = 11/36 (30%)
Query: 4 SSDSNVTVSYVPFKPSADDDNSKLTCRAENTLIANS 39
+ + +D + +C A L++
Sbjct: 55 APAPQEATATFNSTADREDGHRNFSCLAVLDLMSRG 90
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 39.6 bits (91), Expect = 1e-05
Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 14/107 (13%)
Query: 52 VPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEI----------HHN 101
VP P+ + G+ C WF + + N
Sbjct: 1 VPPSKPTISV---PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMN 57
Query: 102 VTGGIILSNISLVLQKVSRQSAGEYSCMAINTEGRG-ASQPIILAVK 147
+ I + L+ V+ +GEY C A N G S+ +
Sbjct: 58 SSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 104
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 39.3 bits (90), Expect = 2e-05
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 66 TDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIIL-----SNISLVLQKVSR 120
+I G+ +F CQV+ + + + WF + E I + + +L + +
Sbjct: 10 GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANI 69
Query: 121 QSAGEYSCMAINTEGRGASQPIILAV 146
AG Y C+ +G + + + +
Sbjct: 70 DDAGIYKCVVTAEDGTQSEATVNVKI 95
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 39.2 bits (90), Expect = 2e-05
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 6/95 (6%)
Query: 52 VPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNI 111
V + + + T +KE D V C + + W N + + + +N
Sbjct: 3 VTQPFLQ----VTNTTVKELDSVTLTCLSNDIG--ANIQWLFNSQSLQLTERMTLSQNNS 56
Query: 112 SLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAV 146
L + + R+ AGEY C N S I L +
Sbjct: 57 ILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI 91
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 38.8 bits (89), Expect = 3e-05
Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 13/104 (12%)
Query: 49 VHFVPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRA-----HRLLWFHNDKEIHHNVT 103
V++ PRVV + + + + E V NP H K IH
Sbjct: 2 VYYPPRVV-------SLEEPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYY 54
Query: 104 GGIILSNISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+S L+ K + + G Y+ +A N G A+Q I
Sbjct: 55 QEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGT-ANQTINGHFL 97
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 38.8 bits (89), Expect = 3e-05
Identities = 21/93 (22%), Positives = 26/93 (27%), Gaps = 12/93 (12%)
Query: 52 VPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNI 111
VP P+ G+ C WF + + N SN
Sbjct: 1 VPPSKPTVNI---PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNS 57
Query: 112 SL---------VLQKVSRQSAGEYSCMAINTEG 135
S V +S GEYSC A N G
Sbjct: 58 SYVLNPTTGELVFDPLSASDTGEYSCEARNGYG 90
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 38.8 bits (89), Expect = 3e-05
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 17/96 (17%)
Query: 66 TDIKEGDDVYFECQVSANPRAHRLLWFHNDKEI---------------HHNVTGGIILSN 110
G DV F C+V ++ + H + W + ++
Sbjct: 15 ASTVVGGDVEFVCKVYSDAQPH-IQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEI 73
Query: 111 ISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAV 146
L ++ V+ + AGEY+C+A N+ G + L V
Sbjct: 74 EVLYIRNVTFEDAGEYTCLAGNSIGI-SFHSAWLTV 108
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 37.4 bits (85), Expect = 1e-04
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 15/110 (13%)
Query: 47 LNVHFVPRVVIHFGSSLNPTDIKEGDDVYFECQVSANP--------RAHRLLWFHNDKEI 98
L V+ P + SS G+ +C + + P +L
Sbjct: 2 LTVNGPPII-----SSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRY 56
Query: 99 HHNVTGGIILSNISLVLQKVSR-QSAGEYSCMAINTEGRGASQPIILAVK 147
+L + + R Y+C A N+ G ++ I L +
Sbjct: 57 TVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGS-DTEIIRLKEQ 105
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 36.4 bits (83), Expect = 1e-04
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 17/97 (17%)
Query: 52 VPRVVIHFGSSLNPTD--IKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILS 109
+P+ V+ L P + E D V +CQ + +P + WFHN+ I + I +
Sbjct: 3 LPKAVV----FLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDA 58
Query: 110 NISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAV 146
+ +GEY C + S P+ L V
Sbjct: 59 A--------TVNDSGEYRCQTNLSTL---SDPVQLEV 84
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 36.6 bits (83), Expect = 2e-04
Identities = 10/126 (7%), Positives = 32/126 (25%), Gaps = 34/126 (26%)
Query: 53 PRVVIHFGSSL-NPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNI 111
P++ + + + + G+ + + +S +P +W + + +
Sbjct: 5 PKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTV-IWQKAITQGNKAPARPAPDAPE 63
Query: 112 -------------------------------SLVLQKVSRQSAGEYSCMAINTEGRGASQ 140
++ ++ G Y+ N G
Sbjct: 64 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGE-DQV 122
Query: 141 PIILAV 146
+ + V
Sbjct: 123 NLTVKV 128
>d1vcaa1 b.1.1.3 (A:91-199) Vascular cell adhesion molecule-1
(VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 109
Score = 36.5 bits (83), Expect = 2e-04
Identities = 12/56 (21%), Positives = 17/56 (30%), Gaps = 4/56 (7%)
Query: 2 TSSSDSNVTVSYVPFKPSADDDNSKLTCRAENTLIANSS----MEDTWILNVHFVP 53
V F P +D L CRA+ + S + L V+ P
Sbjct: 54 ADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 109
Score = 31.1 bits (69), Expect = 0.020
Identities = 15/99 (15%), Positives = 24/99 (24%), Gaps = 13/99 (13%)
Query: 51 FVPRVVIHFGSSLNPTDIKEGDDVYFECQVS-ANPRAHR-LLWFHNDKEI-----HHNVT 103
F IH L G + +C V+ P + D + +
Sbjct: 1 FPKDPEIHLSGPLE-----AGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDAD 55
Query: 104 GGIILSNISLVLQKVSRQSAG-EYSCMAINTEGRGASQP 141
+ + V + G C A S P
Sbjct: 56 RKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVP 94
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 36.2 bits (82), Expect = 2e-04
Identities = 11/102 (10%), Positives = 22/102 (21%), Gaps = 14/102 (13%)
Query: 59 FGSSLNPTDIKEGDDVYFECQVSANPRA-------------HRLLWFHNDKEIHHNVTGG 105
F ++ G + F +V+ ++H +
Sbjct: 7 FVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRA 66
Query: 106 IILSNISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+ L + G Y C + L V
Sbjct: 67 SKVYLFELHITDAQPAFTGGYRCEVSTKDKF-DCSNFNLTVH 107
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 36.1 bits (82), Expect = 3e-04
Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 11/99 (11%)
Query: 58 HFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEI---------HHNVTGGIIL 108
H +S+ E V P L W N + +
Sbjct: 2 HMPASVQLHTAVEMHHWCIPFSVDGQPAPS-LRWLFNGSVLNETSFIFTEFLEPAANETV 60
Query: 109 SNISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+ L L + + + G Y+ +A N G+ AS I+ A
Sbjct: 61 RHGCLRLNQPTHVNNGNYTLLAANPFGQ-ASASIMAAFM 98
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 34.8 bits (80), Expect = 6e-04
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 68 IKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSRQSAGEYS 127
+ EG ++ C+V+ +P L + + I S ++ + + G +
Sbjct: 17 MTEGRELVIPCRVT-SPNITVTLKKFPLDTLIPDGKRIIWDSRKGFIISNATYKEIGLLT 75
Query: 128 CMA 130
C A
Sbjct: 76 CEA 78
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 34.5 bits (78), Expect = 0.001
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 4/76 (5%)
Query: 64 NPTDI--KEGDDVYFECQVSANPRAHRLLWFHNDKEIH--HNVTGGIILSNISLVLQKVS 119
+ + C ++ N + W+ +D + I L
Sbjct: 8 EKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAK 67
Query: 120 RQSAGEYSCMAINTEG 135
+ +G Y C+ N+
Sbjct: 68 VEDSGHYYCVVRNSSY 83
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 34.6 bits (78), Expect = 0.001
Identities = 15/102 (14%), Positives = 26/102 (25%), Gaps = 14/102 (13%)
Query: 59 FGSSLNPTDIKEGDDVYFECQVSANPRAHR-------------LLWFHNDKEIHHNVTGG 105
F +K G+D+ F +V A + ++
Sbjct: 3 FIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERH 62
Query: 106 IILSNISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
+ + + K AG Y C + S L V
Sbjct: 63 SRVYTFEMQIIKAKDNFAGNYRCEVTYKDKF-DSCSFDLEVH 103
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 33.9 bits (76), Expect = 0.001
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 9/85 (10%)
Query: 61 SSLNPTDIKEGDDVYFECQVSANPRAHRLL---------WFHNDKEIHHNVTGGIILSNI 111
++ + + E + + C S + +I + S+
Sbjct: 6 TAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSS 65
Query: 112 SLVLQKVSRQSAGEYSCMAINTEGR 136
+ V+R+ GEY+CM G+
Sbjct: 66 GITFSSVTRKDNGEYTCMVSEEGGQ 90
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 34.0 bits (77), Expect = 0.001
Identities = 14/89 (15%), Positives = 25/89 (28%), Gaps = 9/89 (10%)
Query: 65 PTDIKEGDDVYFECQ------VSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKV 118
+ D C N + + N+ L++ V
Sbjct: 8 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH--FSGVKDRLIVMNV 65
Query: 119 SRQSAGEYSCMAINTEGRGASQPIILAVK 147
+ + G Y+C A T G PI ++
Sbjct: 66 AEKHRGNYTCHASYTYL-GKQYPITRVIE 93
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 33.7 bits (76), Expect = 0.002
Identities = 11/78 (14%), Positives = 20/78 (25%), Gaps = 12/78 (15%)
Query: 69 KEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGG-----------IILSNISLVLQK 117
+V F + P L DK + + + SL +
Sbjct: 8 VVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYN 66
Query: 118 VSRQSAGEYSCMAINTEG 135
++ EY + N
Sbjct: 67 LTSSDEDEYEMESPNITD 84
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 33.5 bits (75), Expect = 0.003
Identities = 16/108 (14%), Positives = 29/108 (26%), Gaps = 25/108 (23%)
Query: 64 NPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNV--------------------- 102
+P GD+ C++S A + V
Sbjct: 10 HPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRT 69
Query: 103 ---TGGIILSNISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAVK 147
I ++L +Q V G Y+C + + + L V+
Sbjct: 70 ELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQ-EEAAVELKVE 116
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 33.2 bits (74), Expect = 0.004
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 11/93 (11%)
Query: 52 VPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHN---------DKEIHHNV 102
+ V +H SS I E + V C S F + +I +
Sbjct: 2 MGSVTVH--SSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASY 59
Query: 103 TGGIILSNISLVLQKVSRQSAGEYSCMAINTEG 135
+ + + V+R+ G Y+CM G
Sbjct: 60 EDRVTFLPTGITFKSVTREDTGTYTCMVSEEGG 92
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 31.9 bits (71), Expect = 0.006
Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 13/79 (16%)
Query: 68 IKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSRQSAGEYS 127
E CQ NP L + V+R G Y
Sbjct: 16 WPENSQQTPMCQAWGNP-LPELKCLKDGTFPLPIGE-----------SVTVTRDLEGTYL 63
Query: 128 CMAINTEGRGASQPIILAV 146
C A +T+G ++ + + V
Sbjct: 64 CRARSTQGE-VTREVTVNV 81
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 32.4 bits (73), Expect = 0.007
Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 21/101 (20%)
Query: 65 PTDIKEGDDVYFECQVSANPRAHRLLWFH------NDKEIHHNVTGG------------- 105
P + E ++V P A ++ DKEI V
Sbjct: 8 PPQVAEDNNVLLLVHN--LPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGRE 65
Query: 106 IILSNISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAV 146
II SN SL+ Q ++ + G Y+ + R + V
Sbjct: 66 IIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHV 106
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 30.7 bits (68), Expect = 0.018
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 53 PRVVIHFGSSLNPTD--IKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSN 110
P+ V+ L P + + D V C+ + +P + + WFHN I +
Sbjct: 3 PKAVL----KLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYR--- 55
Query: 111 ISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAV 146
K + +GEY+C T S P+ L V
Sbjct: 56 -----FKANNNDSGEYTCQTGQTSL---SDPVHLTV 83
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 98
Score = 30.0 bits (67), Expect = 0.033
Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 10/77 (12%)
Query: 70 EGDDVYFECQ-VSANPRAHRLLWFHNDKEIHHNVTGGI---------ILSNISLVLQKVS 119
G + + W + IL+N L ++ ++
Sbjct: 9 LGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLT 68
Query: 120 RQSAGEYSCMAINTEGR 136
R +G Y+ +T G
Sbjct: 69 RDDSGTYNVTVYSTNGT 85
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 30.0 bits (66), Expect = 0.042
Identities = 11/87 (12%), Positives = 23/87 (26%), Gaps = 9/87 (10%)
Query: 70 EGDDVYFECQVSANPRAHRLLWFHNDKE------IHHNVTGGIILSNISLVLQKVSRQSA 123
EG +C + + W + + +L V+++
Sbjct: 16 EGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDV 75
Query: 124 GE---YSCMAINTEGRGASQPIILAVK 147
+ Y C A N + +K
Sbjct: 76 SDIYKYVCTAKNAAVDEEVVLVEYEIK 102
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 28.9 bits (63), Expect = 0.091
Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 52 VPRVVIHFGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNI 111
VP + + + + GDDV CQV W + E V L ++
Sbjct: 2 VPTLKVQ----VPNASVDVGDDVLLRCQVEGRGLEQ-AGWILTELEQSATVMKSGGLPSL 56
Query: 112 SLVLQKVSRQSAGE-YSCMAINTEGRGASQPIILAV 146
L L V+ + +C A N GR A + + V
Sbjct: 57 GLTLANVTSDLNRKNVTCWAENDVGR-AEVSVQVNV 91
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 28.4 bits (63), Expect = 0.14
Identities = 19/88 (21%), Positives = 28/88 (31%), Gaps = 9/88 (10%)
Query: 63 LNPTDIKEGDDVYFECQVSA-NPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSR- 120
T + V C V P + W N K + H+ N Q +S
Sbjct: 9 AKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMHSSAHKTAQPNGDWTYQTLSHL 68
Query: 121 ----QSAGEYSCMAINTEGRGASQPIIL 144
Y+C+ E GA +PI+
Sbjct: 69 ALTPSYGDTYTCVV---EHIGAPEPILR 93
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 28.4 bits (63), Expect = 0.15
Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 14/99 (14%)
Query: 52 VPRVVIHFGSSLNPTDIKEGDDVYFECQVSA-NPRAHRLLWFHNDKEIHHNVTGGIILSN 110
VP V + + + + G C V P + W N + + V+ LS
Sbjct: 5 VPEVTV-----FSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSK 59
Query: 111 -----ISLVLQKVSRQSAGEYSCMAINTEGRGASQPIIL 144
+ + Y C E G QP++
Sbjct: 60 SDHSFFKISYLTFLPSADEIYDCKV---EHWGLDQPLLK 95
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 28.2 bits (61), Expect = 0.17
Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 64 NPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQKVSRQSA 123
+ + GD V C + D ++ VT + +L + VS +
Sbjct: 9 SRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVT--NEGTTSTLTMNPVSFGNE 66
Query: 124 GEYSCMAINTEGR 136
Y C A +
Sbjct: 67 HSYLCTATCESRK 79
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 28.2 bits (61), Expect = 0.18
Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 15/95 (15%)
Query: 64 NPTDIKEGDDVYFECQVSANPRA--------------HRLLWFHNDKEIHHNVTGGIILS 109
++ G + C V+ +L + L
Sbjct: 10 ETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLI 69
Query: 110 NISLVLQKVSRQSAGEYSCMAINTEGRGASQPIIL 144
+ + + SR ++C A NT G + I L
Sbjct: 70 TVLNISEIESRFYKHPFTCFAKNTHGI-DAAYIQL 103
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 27.7 bits (60), Expect = 0.23
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 10/78 (12%)
Query: 59 FGSSLNP-TDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLVLQK 117
FG + N T + +G + + K I T + +
Sbjct: 1 FGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSV---------SQ 51
Query: 118 VSRQSAGEYSCMAINTEG 135
+ Q +G ++C + +
Sbjct: 52 LELQDSGTWTCTVLQNQK 69
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 27.6 bits (60), Expect = 0.32
Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 16/83 (19%)
Query: 71 GDDVYFECQVSANPRAHRLLWFHNDKEIHH----------------NVTGGIILSNISLV 114
+ C + + + KE N T I +N+S+V
Sbjct: 9 KEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIV 68
Query: 115 LQKVSRQSAGEYSCMAINTEGRG 137
+ + G Y C+ + E
Sbjct: 69 ILALRPSDEGTYECVVLKYEKDA 91
>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}
Length = 101
Score = 26.5 bits (58), Expect = 0.64
Identities = 11/86 (12%), Positives = 25/86 (29%), Gaps = 9/86 (10%)
Query: 65 PTDIKEGDDVYFECQVSA-NPRAHRLLWFHNDKEIHHNVTGGIILSNI-----SLVLQKV 118
+ + G+ C + +P + W N + + V+ + L
Sbjct: 13 RSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTF 72
Query: 119 SRQSAGEYSCMAINTEGRGASQPIIL 144
+ Y C + G +P+
Sbjct: 73 LPSTDDFYDCEV---DHWGLEEPLRK 95
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 25.9 bits (56), Expect = 1.1
Identities = 13/86 (15%), Positives = 24/86 (27%), Gaps = 18/86 (20%)
Query: 69 KEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILS------------------N 110
K+GD V C S N +I N + N
Sbjct: 7 KKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGN 66
Query: 111 ISLVLQKVSRQSAGEYSCMAINTEGR 136
L+++ + + + Y C + +
Sbjct: 67 FPLIIKNLKIEDSDTYICEVEDQKEE 92
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate
phosphoribosyltransferase EF2626 {Enterococcus faecalis
[TaxId: 1351]}
Length = 345
Score = 25.7 bits (56), Expect = 2.5
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 22 DDNSKLTCRAENTLIANSSMEDTWILNVHFVPRVVIHFGSSLNPTDIKE 70
D + L R ++ +A S L+ I+ + L+ I
Sbjct: 114 DKINFLGVRIDSGDMAYISKRVREQLDEAGFTEAKIYASNDLDENTILN 162
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 25.2 bits (54), Expect = 3.7
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 64 NPTDIKEGDDVYFECQVSANPRAHRLLWFH 93
P +K G+ + + V N + R L
Sbjct: 269 KPFSVKAGEALKGKVTVHKNKKDPRSLTVT 298
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 24.6 bits (52), Expect = 4.3
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 109 SNISLVLQKVSRQSAGEYSCMAINTEGRGASQPIILAV 146
+ S+ + + G Y C G A++ I L V
Sbjct: 86 GDASINVTNLQLSDIGTYQCKVKKAPGV-ANKKIHLVV 122
>d2o62a2 b.60.1.9 (A:1-132) Uncharacterized protein All1756 ortholog
{Nostoc punctiforme [TaxId: 272131]}
Length = 132
Score = 24.0 bits (52), Expect = 5.4
Identities = 12/81 (14%), Positives = 23/81 (28%), Gaps = 9/81 (11%)
Query: 19 SADDDNSKLTCRAENTLIANSSMEDTWILNVHFVPRVVIHF---GSSLNPTDIKEGDDVY 75
++N + L + S +D I V ++ F S + +
Sbjct: 39 EGLNNNQTVR------LTLSRSGKDDVIREFRSVGGGLLFFENGSFSEGLIQLGPFSEFG 92
Query: 76 FECQVSANPRAHRLLWFHNDK 96
E R RL+ +
Sbjct: 93 GELAFVHENRRLRLVQLFDRN 113
>d1o98a1 c.105.1.1 (A:77-310) 2,3-Bisphosphoglycerate-independent
phosphoglycerate mutase, substrate-binding domain
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 234
Score = 24.3 bits (52), Expect = 7.7
Identities = 15/116 (12%), Positives = 34/116 (29%), Gaps = 10/116 (8%)
Query: 7 SNVTVSYVPFKPSADDDNSKLT------CRAENTLIANSSMEDTWILNVH--FVPRVVIH 58
+ ++ Y D + +ED++ ++ FV VI
Sbjct: 104 ATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPLECIEDSYKHGIYDEFVLPSVIV 163
Query: 59 FGSSLNPTDIKEGDDVYFECQVSANPRAHRLLWFHNDKEIHHNVTGGIILSNISLV 114
I++ D + F RA ++ +++ G ++ V
Sbjct: 164 REDGRPVATIQDNDAIIFYNF--RPDRAIQISNTFTNEDFREFDRGPKHPKHLFFV 217
>d1kxoa_ b.60.1.1 (A:) Bilin-binding protein {Cabbage butterfly
(Pieris brassicae) [TaxId: 7116]}
Length = 171
Score = 23.7 bits (50), Expect = 8.6
Identities = 9/39 (23%), Positives = 13/39 (33%)
Query: 9 VTVSYVPFKPSADDDNSKLTCRAENTLIANSSMEDTWIL 47
VT V S D+ N + M+ W+L
Sbjct: 93 VTQEGVFNVLSTDNKNYIIGYFCSYDEDKKGHMDLVWVL 131
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.130 0.383
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 513,924
Number of extensions: 21794
Number of successful extensions: 170
Number of sequences better than 10.0: 1
Number of HSP's gapped: 132
Number of HSP's successfully gapped: 77
Length of query: 147
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 70
Effective length of database: 1,350,386
Effective search space: 94527020
Effective search space used: 94527020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.2 bits)