Query psy15955
Match_columns 475
No_of_seqs 552 out of 3309
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 17:20:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15955.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15955hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.5E-46 5.2E-51 361.6 30.9 269 100-371 3-274 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 1.1E-45 3.9E-50 357.1 20.2 271 100-372 4-278 (296)
3 1djx_A PLC-D1, phosphoinositid 99.9 5.6E-27 1.9E-31 245.8 11.6 207 14-240 406-622 (624)
4 3n5a_A Synaptotagmin-7; calciu 99.9 5.9E-25 2E-29 187.3 14.4 137 231-369 2-138 (138)
5 1w15_A Synaptotagmin IV; metal 99.9 1.9E-24 6.5E-29 187.5 14.2 139 229-369 14-152 (153)
6 2d8k_A Synaptotagmin VII; exoc 99.9 5.1E-24 1.7E-28 182.2 14.8 130 98-227 8-137 (141)
7 2dmg_A KIAA1228 protein; beta- 99.9 1.2E-23 4.2E-28 180.0 16.4 133 98-232 6-142 (142)
8 1tjx_A Similar to synaptotagmi 99.9 5.8E-24 2E-28 185.6 14.4 141 229-371 9-149 (159)
9 2z0u_A WW domain-containing pr 99.9 1.6E-24 5.6E-29 187.6 10.4 126 99-225 26-155 (155)
10 1rsy_A Synaptotagmin I; calciu 99.9 1.3E-23 4.5E-28 181.9 15.2 128 98-226 24-151 (152)
11 3f04_A Synaptotagmin-1; C2A, c 99.9 1.1E-23 3.8E-28 180.5 14.1 125 100-225 18-142 (143)
12 3fdw_A Synaptotagmin-like prot 99.9 1E-23 3.4E-28 181.9 12.5 130 98-228 5-137 (148)
13 1wfm_A Synaptotagmin XIII; C2 99.9 4.5E-23 1.5E-27 175.5 15.9 125 99-227 9-134 (138)
14 2cm5_A Rabphilin-3A; protein t 99.9 1.7E-23 6E-28 184.0 13.4 141 228-370 20-160 (166)
15 1ugk_A Synaptotagmin IV, KIAA1 99.9 6.7E-23 2.3E-27 174.5 16.5 128 99-226 5-134 (138)
16 2zkm_X 1-phosphatidylinositol- 99.9 3.9E-24 1.3E-28 229.3 11.0 195 14-240 587-797 (799)
17 2enp_A B/K protein; C2 type 1, 99.9 4.1E-23 1.4E-27 177.8 15.2 129 97-226 7-142 (147)
18 3ohm_B 1-phosphatidylinositol- 99.9 3.3E-24 1.1E-28 229.5 9.7 196 14-240 634-843 (885)
19 2bwq_A Regulating synaptic mem 99.9 6.6E-23 2.3E-27 172.4 15.2 123 101-224 3-129 (129)
20 2chd_A Rabphilin-3A, exophilin 99.9 1.3E-22 4.3E-27 173.7 14.1 130 97-226 10-141 (142)
21 1v27_A Regulating synaptic mem 99.9 1E-22 3.4E-27 174.1 13.5 128 100-228 5-136 (141)
22 3qr0_A Phospholipase C-beta (P 99.9 1.5E-23 5E-28 223.5 9.7 198 15-239 560-768 (816)
23 3fbk_A RGS3, RGP3, regulator o 99.9 9.9E-23 3.4E-27 176.6 13.2 137 99-238 10-150 (153)
24 1rh8_A Piccolo protein; beta-s 99.9 3.9E-23 1.3E-27 176.9 10.0 127 99-227 3-140 (142)
25 2r83_A Synaptotagmin-1; C2A-C2 99.9 1.3E-22 4.3E-27 194.6 11.2 202 4-226 55-273 (284)
26 2b3r_A Phosphatidylinositol-4- 99.9 4.1E-22 1.4E-26 168.5 13.1 123 103-226 7-131 (134)
27 2z0u_A WW domain-containing pr 99.9 1.5E-22 5.1E-27 175.3 10.2 125 229-353 27-153 (155)
28 1tjx_A Similar to synaptotagmi 99.9 1E-21 3.5E-26 171.3 15.4 127 99-226 8-148 (159)
29 3n5a_A Synaptotagmin-7; calciu 99.9 1.2E-21 4.3E-26 166.6 14.3 120 102-224 2-123 (138)
30 2cm5_A Rabphilin-3A; protein t 99.9 2.4E-21 8.3E-26 170.2 16.1 113 98-211 19-133 (166)
31 3rdl_A Protein kinase C alpha 99.9 1.2E-21 4.1E-26 166.5 13.3 122 100-226 2-125 (137)
32 1w15_A Synaptotagmin IV; metal 99.9 3.9E-22 1.3E-26 172.9 9.9 125 98-225 12-138 (153)
33 2dmg_A KIAA1228 protein; beta- 99.9 1.7E-21 6E-26 166.5 13.5 128 228-356 7-136 (142)
34 2q3x_A Regulating synaptic mem 99.9 2.4E-21 8.2E-26 171.0 13.7 125 97-227 13-141 (171)
35 1rsy_A Synaptotagmin I; calciu 99.9 2.6E-21 8.8E-26 167.5 13.1 124 229-354 26-149 (152)
36 1dqv_A Synaptotagmin III; beta 99.9 1.9E-22 6.6E-27 194.3 6.5 189 4-212 56-249 (296)
37 3fdw_A Synaptotagmin-like prot 99.9 9.5E-22 3.2E-26 169.4 10.0 114 228-341 6-120 (148)
38 1wfm_A Synaptotagmin XIII; C2 99.9 1.2E-20 4.2E-25 160.4 16.1 122 229-354 10-131 (138)
39 2dmh_A Myoferlin; beta-sandwic 99.9 5.6E-21 1.9E-25 163.0 14.0 125 114-243 5-134 (140)
40 3f04_A Synaptotagmin-1; C2A, c 99.9 4.2E-21 1.4E-25 164.4 12.9 123 229-353 18-140 (143)
41 2bwq_A Regulating synaptic mem 99.8 5.8E-21 2E-25 160.5 12.9 113 230-342 3-118 (129)
42 1a25_A CALB, protein kinase C 99.8 9.8E-21 3.4E-25 163.2 14.5 124 98-226 15-140 (149)
43 2ep6_A MCTP2 protein; beta san 99.8 3.4E-21 1.2E-25 162.8 11.0 123 110-241 7-131 (133)
44 2d8k_A Synaptotagmin VII; exoc 99.8 1E-20 3.5E-25 161.5 14.1 123 229-353 10-133 (141)
45 1v27_A Regulating synaptic mem 99.8 4.1E-21 1.4E-25 164.0 11.1 115 227-341 3-120 (141)
46 1ugk_A Synaptotagmin IV, KIAA1 99.8 1.7E-20 5.9E-25 159.5 14.8 115 228-344 5-121 (138)
47 3b7y_A E3 ubiquitin-protein li 99.8 9.4E-21 3.2E-25 164.2 13.0 125 114-242 18-153 (153)
48 3fbk_A RGS3, RGP3, regulator o 99.8 9.6E-21 3.3E-25 164.0 13.0 130 228-372 10-140 (153)
49 1rlw_A Phospholipase A2, CALB 99.8 4.9E-21 1.7E-25 160.2 9.5 121 115-242 2-125 (126)
50 2b3r_A Phosphatidylinositol-4- 99.8 1.3E-20 4.3E-25 159.4 12.0 111 232-343 7-118 (134)
51 2chd_A Rabphilin-3A, exophilin 99.8 1.8E-20 6.3E-25 160.1 11.7 116 229-344 13-129 (142)
52 1wfj_A Putative elicitor-respo 99.8 3.7E-21 1.3E-25 163.2 7.2 122 115-244 9-132 (136)
53 2fk9_A Protein kinase C, ETA t 99.8 8.5E-21 2.9E-25 163.5 9.1 115 115-241 28-156 (157)
54 3m7f_B E3 ubiquitin-protein li 99.8 2.7E-20 9.2E-25 165.1 12.5 126 114-243 6-142 (176)
55 2enp_A B/K protein; C2 type 1, 99.8 3.5E-20 1.2E-24 159.4 12.5 113 229-343 10-129 (147)
56 3kwu_A MUNC13-1; calcium bindi 99.8 6.8E-20 2.3E-24 157.8 13.3 118 115-241 16-146 (148)
57 2q3x_A Regulating synaptic mem 99.8 1.3E-19 4.4E-24 159.8 15.1 126 227-371 14-141 (171)
58 1gmi_A Protein kinase C, epsil 99.8 1.6E-20 5.5E-25 159.2 8.7 117 115-243 5-134 (136)
59 1rh8_A Piccolo protein; beta-s 99.8 1.9E-20 6.5E-25 160.1 8.8 112 229-342 4-125 (142)
60 3rdl_A Protein kinase C alpha 99.8 4.6E-20 1.6E-24 156.6 11.0 110 229-341 2-111 (137)
61 3pyc_A E3 ubiquitin-protein li 99.8 1.6E-19 5.4E-24 152.3 11.6 120 115-240 4-131 (132)
62 1a25_A CALB, protein kinase C 99.8 2.2E-19 7.5E-24 154.7 12.3 110 229-341 17-126 (149)
63 2nq3_A Itchy homolog E3 ubiqui 99.8 5.1E-19 1.8E-23 155.8 8.8 121 114-242 34-161 (173)
64 2dmh_A Myoferlin; beta-sandwic 99.7 5.4E-17 1.8E-21 138.1 12.6 104 243-352 5-109 (140)
65 2ep6_A MCTP2 protein; beta san 99.7 5.5E-17 1.9E-21 136.8 10.2 98 237-342 5-102 (133)
66 3l9b_A Otoferlin; C2-domain, b 99.7 2.5E-17 8.6E-22 135.9 7.8 121 116-245 21-143 (144)
67 2fk9_A Protein kinase C, ETA t 99.7 6.9E-17 2.4E-21 139.0 10.7 108 242-369 26-145 (157)
68 3b7y_A E3 ubiquitin-protein li 99.7 4.8E-16 1.6E-20 134.3 14.4 99 242-343 17-116 (153)
69 1rlw_A Phospholipase A2, CALB 99.7 1.4E-16 4.7E-21 133.0 9.7 104 244-352 2-108 (126)
70 1gmi_A Protein kinase C, epsil 99.7 2.3E-16 7.9E-21 133.5 11.1 106 244-369 5-121 (136)
71 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.3E-16 4.5E-21 133.7 9.2 88 115-215 4-92 (131)
72 3kwu_A MUNC13-1; calcium bindi 99.7 7.4E-16 2.5E-20 132.3 12.7 90 244-341 16-116 (148)
73 3m7f_B E3 ubiquitin-protein li 99.7 1.6E-15 5.5E-20 134.2 15.0 99 242-343 5-104 (176)
74 3jzy_A Intersectin 2; C2 domai 99.6 3.5E-16 1.2E-20 162.2 10.0 118 114-240 385-506 (510)
75 3pyc_A E3 ubiquitin-protein li 99.6 5.6E-16 1.9E-20 130.4 9.0 90 244-340 4-96 (132)
76 1wfj_A Putative elicitor-respo 99.6 3.4E-16 1.1E-20 132.5 7.4 91 243-341 8-99 (136)
77 3nsj_A Perforin-1; pore formin 99.6 1.7E-15 5.7E-20 155.4 10.7 108 116-239 394-501 (540)
78 1cjy_A CPLA2, protein (cytosol 99.6 1.3E-15 4.4E-20 160.9 8.4 109 114-226 16-127 (749)
79 2cjs_A UNC-13 homolog A, MUNC1 99.6 2.6E-15 8.7E-20 131.1 8.5 88 115-215 13-101 (167)
80 2nq3_A Itchy homolog E3 ubiqui 99.6 1.3E-14 4.6E-19 127.5 10.9 89 243-340 34-122 (173)
81 3pfq_A PKC-B, PKC-beta, protei 99.5 9.4E-14 3.2E-18 148.4 14.2 126 97-227 155-282 (674)
82 2cjt_A UNC-13 homolog A, MUNC1 99.5 1.5E-13 5E-18 115.1 10.2 85 244-342 4-89 (131)
83 3bxj_A RAS GTPase-activating p 99.5 4.4E-15 1.5E-19 151.8 0.2 101 115-226 10-117 (483)
84 3l9b_A Otoferlin; C2-domain, b 99.4 2.1E-13 7.1E-18 112.6 8.6 89 245-343 21-110 (144)
85 1cjy_A CPLA2, protein (cytosol 99.4 3.1E-13 1.1E-17 142.8 9.2 108 243-355 16-126 (749)
86 3nsj_A Perforin-1; pore formin 99.4 7.1E-13 2.4E-17 135.9 11.6 89 244-339 393-481 (540)
87 1djx_A PLC-D1, phosphoinositid 99.4 1.3E-12 4.5E-17 137.0 13.5 99 243-343 495-596 (624)
88 2cjs_A UNC-13 homolog A, MUNC1 99.4 7E-13 2.4E-17 115.5 9.6 85 244-342 13-98 (167)
89 3jzy_A Intersectin 2; C2 domai 99.4 4.9E-13 1.7E-17 138.5 10.0 93 242-341 384-476 (510)
90 3pfq_A PKC-B, PKC-beta, protei 99.4 5.7E-13 2E-17 142.3 9.8 123 229-355 158-280 (674)
91 3oym_A PFV integrase, P42IN; p 99.3 5.1E-13 1.7E-17 133.8 1.8 103 353-455 178-283 (395)
92 2x78_A Integrase; viral protei 99.3 8.4E-13 2.9E-17 119.1 2.0 102 355-456 68-172 (200)
93 3hph_A Integrase, IN; protein- 99.1 4.1E-12 1.4E-16 116.3 -0.1 98 350-448 106-205 (219)
94 3bxj_A RAS GTPase-activating p 99.1 6.8E-12 2.3E-16 128.2 0.1 100 244-355 10-116 (483)
95 3kks_A Integrase, IN; beta-str 99.0 2.1E-11 7.1E-16 104.5 -0.3 98 350-449 48-148 (152)
96 1k6y_A Integrase; HIV-1, domai 99.0 7E-11 2.4E-15 107.5 2.5 92 358-449 111-205 (212)
97 3f9k_A Integrase; protein-prot 99.0 2E-10 7E-15 104.2 4.7 91 358-448 112-205 (210)
98 1c6v_A Protein (SIV integrase) 99.0 2.4E-10 8.3E-15 99.1 4.4 91 357-447 61-154 (164)
99 3l3u_A POL polyprotein; DNA in 99.0 1.3E-10 4.5E-15 100.9 2.5 90 358-447 62-154 (163)
100 3qr0_A Phospholipase C-beta (P 98.9 3.2E-09 1.1E-13 113.5 11.7 89 245-343 650-743 (816)
101 2enj_A NPKC-theta, protein kin 98.9 5.9E-09 2E-13 84.5 10.3 113 115-241 9-129 (138)
102 1yrk_A NPKC-delta, protein kin 98.9 5.6E-09 1.9E-13 83.5 9.8 113 115-241 5-124 (126)
103 2zkm_X 1-phosphatidylinositol- 98.9 3.9E-09 1.3E-13 113.4 10.9 89 244-342 677-770 (799)
104 3ohm_B 1-phosphatidylinositol- 98.9 4.5E-09 1.5E-13 113.0 10.6 88 245-342 725-816 (885)
105 1cxq_A Avian sarcoma virus int 98.9 1.7E-10 5.7E-15 100.2 -0.5 88 354-441 65-162 (162)
106 1c0m_A Protein (integrase); HI 98.7 3.3E-09 1.1E-13 98.2 3.4 101 354-454 64-174 (238)
107 1ex4_A Integrase; SH3-like dom 98.7 2E-09 6.7E-14 99.8 1.7 92 357-448 61-155 (239)
108 3av9_A Integrase, IN; protein- 98.6 2E-09 6.9E-14 95.4 -1.3 90 358-447 82-174 (183)
109 1yrk_A NPKC-delta, protein kin 98.2 1.8E-05 6E-10 63.3 11.9 107 245-371 6-115 (126)
110 2enj_A NPKC-theta, protein kin 98.1 2.3E-05 7.8E-10 63.6 9.7 106 245-371 10-120 (138)
111 1bco_A MUA domain II, bacterio 96.7 0.00057 2E-08 65.9 2.7 89 356-445 80-222 (327)
112 2wxf_A Phosphatidylinositol-4, 94.3 0.24 8.2E-06 53.9 11.6 97 243-342 215-325 (940)
113 3hhm_A Phosphatidylinositol-4, 94.1 0.26 8.8E-06 54.0 11.2 97 243-341 353-455 (1091)
114 3l4c_A Dedicator of cytokinesi 94.1 0.34 1.2E-05 42.8 10.0 43 151-194 77-119 (220)
115 3l4c_A Dedicator of cytokinesi 93.9 0.85 2.9E-05 40.3 12.2 58 281-338 76-137 (220)
116 1e7u_A Phosphatidylinositol 3- 93.9 0.33 1.1E-05 52.8 11.6 99 243-342 216-331 (961)
117 2y3a_A Phosphatidylinositol-4, 90.6 0.36 1.2E-05 53.1 6.9 96 243-341 351-470 (1092)
118 2wxf_A Phosphatidylinositol-4, 90.3 0.87 3E-05 49.5 9.5 95 113-211 214-324 (940)
119 2yrb_A Protein fantom; beta sa 87.4 1.1 3.7E-05 37.3 6.0 123 114-240 16-148 (156)
120 3hhm_A Phosphatidylinositol-4, 86.8 3 0.0001 45.8 10.7 95 114-211 353-455 (1091)
121 1e7u_A Phosphatidylinositol 3- 81.8 4.2 0.00014 44.3 9.1 78 114-193 216-296 (961)
122 4fcy_A Transposase; rnaseh, DD 79.0 0.75 2.6E-05 46.9 2.1 74 372-445 286-393 (529)
123 2y3a_A Phosphatidylinositol-4, 77.1 1.4 4.7E-05 48.7 3.5 77 113-193 350-430 (1092)
124 2yrb_A Protein fantom; beta sa 64.0 40 0.0014 27.8 8.8 98 238-340 11-115 (156)
125 2qzq_A Axin interactor, dorsal 49.9 1E+02 0.0035 25.2 8.8 100 237-339 6-111 (152)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1.5e-46 Score=361.56 Aligned_cols=269 Identities=46% Similarity=0.858 Sum_probs=245.9
Q ss_pred CcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccc
Q psy15955 100 ENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQK 179 (475)
Q Consensus 100 ~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~ 179 (475)
+..|+|.+++.|+...+.|.|+|++|++|+.++..+.+||||+|++.+++.+.++|+++++++||+|||+|.|. ++..+
T Consensus 3 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~-v~~~~ 81 (284)
T 2r83_A 3 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK-VPYSE 81 (284)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEEC-CCGGG
T ss_pred cceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEE-echHH
Confidence 45799999999999999999999999999999999999999999998776678899999999999999999998 66666
Q ss_pred cccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCCC---CcccceeeeeeecCCceeEEEEEEeecc
Q psy15955 180 LQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAK---DKCGELLTSLCYHPSNSVLTITLLKARN 256 (475)
Q Consensus 180 ~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~---~~~G~l~l~l~~~~~~~~L~v~v~~a~~ 256 (475)
+....|+|+|||+|.++++++||++.++|.++..+.....|++|.+..+ ...|+|.+++.|.|..+.|.|.|++|++
T Consensus 82 ~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~~l~v~v~~a~~ 161 (284)
T 2r83_A 82 LAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKN 161 (284)
T ss_dssp CTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTTEEEEEEEEEES
T ss_pred hCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCCceEEEEEEeEC
Confidence 6678999999999999999999999999999988888889999987543 4679999999999999999999999999
Q ss_pred CcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEEeccCCCCCeeeEEEEE
Q psy15955 257 LKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILL 336 (475)
Q Consensus 257 L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~~~~~~d~~lG~~~i 336 (475)
|+..+..+.+||||++++..++....+++|++++++.||.|||+|.|.++.++++...|.|+|||++.++++++||++.|
T Consensus 162 L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i 241 (284)
T 2r83_A 162 LKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFV 241 (284)
T ss_dssp CCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEE
T ss_pred CCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEE
Confidence 99999999999999999987776667889999999999999999999999888887889999999999999999999999
Q ss_pred cCcCCCCCcccccccccccCCCcceeeeeccCCCC
Q psy15955 337 AGKNGSGASETKHWQDMITKPRQTIVQWHRLKPDH 371 (475)
Q Consensus 337 ~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~s~ 371 (475)
++... +.+..||.+|+..|++.+..||+|.+..
T Consensus 242 ~l~~~--~~~~~~w~~~~~~~~~~~~~W~~L~~~~ 274 (284)
T 2r83_A 242 GYNST--GAELRHWSDMLANPRRPIAQWHTLQVEE 274 (284)
T ss_dssp ETTCC--HHHHHHHHHHHHSTTSCEEEEEECBCHH
T ss_pred CCCCC--CcHHHHHHHHHHCCCCchheeeecCCcc
Confidence 98653 3577899999999999999999998754
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=1.1e-45 Score=357.10 Aligned_cols=271 Identities=42% Similarity=0.771 Sum_probs=239.3
Q ss_pred CcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccc
Q psy15955 100 ENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQK 179 (475)
Q Consensus 100 ~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~ 179 (475)
...|+|+++++|+...+.|.|+|++|++|+.+|..|.+||||+|++.+++.++++|+++++++||+|||+|.|. ++..+
T Consensus 4 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~~ 82 (296)
T 1dqv_A 4 APCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFS-VPLAE 82 (296)
T ss_dssp CSSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEE-CCGGG
T ss_pred CeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEE-ecHHH
Confidence 45799999999999999999999999999999999999999999998777788999999999999999999999 66667
Q ss_pred cccceEEEEEEeeCCCCCCccccceeec-cccccC-CCCcceeeccCCCCC--CcccceeeeeeecCCceeEEEEEEeec
Q psy15955 180 LQSRVLHLHVFDYDRFSRDDSIGEVFLP-LCQVDL-SEKPTFWKALKPPAK--DKCGELLTSLCYHPSNSVLTITLLKAR 255 (475)
Q Consensus 180 ~~~~~L~~~V~d~d~~~~~~~iG~~~i~-l~~l~~-~~~~~~~~~L~~~~~--~~~G~l~l~l~~~~~~~~L~v~v~~a~ 255 (475)
+....|+|+|||+|.++++++||++.++ +.++.. ......|++|.+..+ ...|+|.+++.|.|..+.|.|.|++|+
T Consensus 83 l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~~~l~v~v~~a~ 162 (296)
T 1dqv_A 83 LAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAGLLTVTIIKAS 162 (296)
T ss_dssp GSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred hcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEeccccceeEEEEEEee
Confidence 6677899999999999999999999996 444432 344568999976432 457999999999999999999999999
Q ss_pred cCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEEeccCCCCCeeeEEEE
Q psy15955 256 NLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRIL 335 (475)
Q Consensus 256 ~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~~~~~~d~~lG~~~ 335 (475)
+|+.++..|.+||||++++.++++...+++|++++++.||.|||+|.|.++.+++....|.|+|||++.++++++||.+.
T Consensus 163 ~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~ 242 (296)
T 1dqv_A 163 NLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCR 242 (296)
T ss_dssp SCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECC
T ss_pred cCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEE
Confidence 99999999999999999987666555678999999999999999999999888877778999999999999999999999
Q ss_pred EcCcCCCCCcccccccccccCCCcceeeeeccCCCCc
Q psy15955 336 LAGKNGSGASETKHWQDMITKPRQTIVQWHRLKPDHE 372 (475)
Q Consensus 336 i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~s~~ 372 (475)
|++.... ..+..||.+|+..|++.+..||+|.....
T Consensus 243 i~l~~~~-~~~~~~W~~~~~~~~~~~~~w~~L~~~~~ 278 (296)
T 1dqv_A 243 VGPEAAD-PHGREHWAEMLANPRKPVEHWHQLVEEKT 278 (296)
T ss_dssp CSSCTTC-HHHHHHHHTSSSSSSSCSCSCCCCBBCC-
T ss_pred ECCccCC-chhHHHHHHHHhCCCCceeEeeeccCccc
Confidence 9886542 13678999999999999999999987644
No 3
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.94 E-value=5.6e-27 Score=245.77 Aligned_cols=207 Identities=19% Similarity=0.243 Sum_probs=156.3
Q ss_pred hHHHHHhhhhhhhcccCccccCCCCCCCCCCCCCCCCCcccCCCC---CCcccccccccCCCCCCCCcccccccccceee
Q psy15955 14 TLSRFLSQSVAQLETAGTTVDSNNSKSPVPGSSHAMEGAIASSSS---STPLHNKAVANVKAGEHPSSAFMQSRSVSLVD 90 (475)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~n~~~g~~~~~~~l~~~~~s~~~ 90 (475)
..-+++++++.||||+|+|++|||++|...|...+...+.+=++. ++...++|..||+||||+||++|+.....+
T Consensus 406 ~~~~~n~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~g~F~~ng~~GYvlKP~~lr~~~~~f-- 483 (624)
T 1djx_A 406 GFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPNTTF-- 483 (624)
T ss_dssp HHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCSHHHHHHHHHHHSGGGCSEEECCGGGGCTTCCC--
T ss_pred HHHHHhhhcceeeccCCccCCCCCCCchHHhhccceeeeecccCCchHHhHHHHHhhcCCCCccEECCHHHcCCCCCc--
Confidence 345789999999999999999999999776444444444333222 122347899999999999999998865322
Q ss_pred eEeCCCCCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCC--CCCCCcEEEEEEeCC--CCceEEeeeecCC-CCce
Q psy15955 91 MYIDNTEPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDM--SGTSDPYVKVALLPD--KKHRLETKIKRRT-LNPR 165 (475)
Q Consensus 91 ~~~~~~~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~--~~~~dpyv~v~l~~~--~~~~~kT~v~~~~-~nP~ 165 (475)
++.......|. ..+.|.|+|++|++|+..+. .+.+||||+|.+.+. +..++||++++++ +||+
T Consensus 484 ---~p~~~~~~~~~---------~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~ 551 (624)
T 1djx_A 484 ---NSRALTQGPWW---------RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPR 551 (624)
T ss_dssp ---CTTSCCSSTTC---------CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCE
T ss_pred ---CcccccccCCc---------cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCc
Confidence 22221111121 35579999999999999884 689999999999543 3457899999997 9999
Q ss_pred eeeeEEeecccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCCCCc--ccceeeeeee
Q psy15955 166 WNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDK--CGELLTSLCY 240 (475)
Q Consensus 166 w~e~f~f~~~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~--~G~l~l~l~~ 240 (475)
|||+|.|. +...+ ...|+|+|||+|..+++++||++.+||.+|..+ ..|++|....+.. .|.|.+.+.+
T Consensus 552 WnE~f~F~-v~~~e--l~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 552 WDMEFEFE-VTVPD--LALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQHPSATLFVKISI 622 (624)
T ss_dssp EEEEEEEE-ESCGG--GCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred cCceEEEE-EecCC--CCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCCCceEEEEEEEE
Confidence 99999998 44443 358999999999999999999999999999754 3589997766553 4666666655
No 4
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.92 E-value=5.9e-25 Score=187.28 Aligned_cols=137 Identities=57% Similarity=1.018 Sum_probs=126.4
Q ss_pred ccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccccc
Q psy15955 231 CGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKI 310 (475)
Q Consensus 231 ~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l 310 (475)
+|+|.+++.|.+..+.|.|.|++|++|+..+..|.+||||++++.+.+....+++|++++++.||.|||+|.|.++..++
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l 81 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKL 81 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhc
Confidence 69999999999999999999999999999999999999999999877666678899999999999999999999988888
Q ss_pred ccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCcccccccccccCCCcceeeeeccCC
Q psy15955 311 RECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKP 369 (475)
Q Consensus 311 ~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~ 369 (475)
....|.|+|||++.++++++||++.|++.+ ...+..+|.+++..|++.+..||.|.+
T Consensus 82 ~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~~~~~~~~Wh~L~p 138 (138)
T 3n5a_A 82 RETTIIITVMDKDKLSRNDVIGKIYLSWKS--GPGEVKHWKDMIARPRQPVAQWHQLKA 138 (138)
T ss_dssp GGEEEEEEEEECCSSSCCEEEEEEEESSSS--CHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CceEEEEEEEECCCCCCCcEEEEEEEcccc--CChHHHHHHHHHhCCCCeEEEEeecCC
Confidence 778899999999999999999999999975 345778999999999999999999964
No 5
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.92 E-value=1.9e-24 Score=187.50 Aligned_cols=139 Identities=45% Similarity=0.782 Sum_probs=121.1
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWE 308 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~ 308 (475)
...|+|.+++.|.+..+.|.|.|++|++|+..+..+.+||||++++.+++....+++|+++++++||+|||+|.|.++..
T Consensus 14 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 93 (153)
T 1w15_A 14 SGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCE 93 (153)
T ss_dssp --CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSS
T ss_pred ccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHH
Confidence 46799999999999999999999999999999999999999999998777666688999999999999999999999888
Q ss_pred ccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCcccccccccccCCCcceeeeeccCC
Q psy15955 309 KIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKP 369 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~ 369 (475)
++....|.|+|||++.++++++||++.|++.+ ...+..+|.+++..|++.+..||.|.+
T Consensus 94 ~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~~~~~Wh~L~~ 152 (153)
T 1w15_A 94 SLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRRQIAKWHMLCD 152 (153)
T ss_dssp SSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred HhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCCeeeecccccc
Confidence 77777899999999999999999999999976 456788999999999999999999964
No 6
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.91 E-value=5.1e-24 Score=182.15 Aligned_cols=130 Identities=62% Similarity=1.099 Sum_probs=117.3
Q ss_pred CCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccc
Q psy15955 98 PSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPI 177 (475)
Q Consensus 98 ~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~ 177 (475)
..+..|+|.+++.|....+.|.|+|++|++|+..+..+.+||||+|++.+++.+++||+++++++||+|||+|.|..++.
T Consensus 8 ~~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 87 (141)
T 2d8k_A 8 SRENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPY 87 (141)
T ss_dssp CCCCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCH
T ss_pred CCceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCH
Confidence 34568999999999999999999999999999999999999999999987777789999999999999999999985455
Q ss_pred cccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCC
Q psy15955 178 QKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPA 227 (475)
Q Consensus 178 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~ 227 (475)
..+....|.|+|||+|.++++++||++.++|.++..+.....|++|.+..
T Consensus 88 ~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 88 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp HHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred HHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 55556789999999999999999999999999998888788999998753
No 7
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=1.2e-23 Score=179.97 Aligned_cols=133 Identities=29% Similarity=0.518 Sum_probs=116.4
Q ss_pred CCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCC--ceEEeeeecCCCCceeeeeEEeecc
Q psy15955 98 PSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK--HRLETKIKRRTLNPRWNETLYFEGF 175 (475)
Q Consensus 98 ~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~~~~~nP~w~e~f~f~~~ 175 (475)
+....|+|+++++|....+.|.|+|++|++|+.++..+ +||||+|++.+++. .+++|+++++++||+|||+|.|. +
T Consensus 6 ~~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 83 (142)
T 2dmg_A 6 SGSPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFS-V 83 (142)
T ss_dssp CSCSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEEC-C
T ss_pred CCCCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEE-e
Confidence 34568999999999999999999999999999999889 99999999986554 67899999999999999999998 6
Q ss_pred cccccccceEEEEEEeeCCCCC--CccccceeeccccccCCCCcceeeccCCCCCCccc
Q psy15955 176 PIQKLQSRVLHLHVFDYDRFSR--DDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDKCG 232 (475)
Q Consensus 176 ~~~~~~~~~L~~~V~d~d~~~~--~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~G 232 (475)
+..++....|.|+|||+|.++. +++||++.++|.++..+.....|++|.+..+...|
T Consensus 84 ~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~~~G 142 (142)
T 2dmg_A 84 SLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGPSSG 142 (142)
T ss_dssp CHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSCCCC
T ss_pred cHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCCCCC
Confidence 6666666789999999998763 57999999999999887778899999887655444
No 8
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.91 E-value=5.8e-24 Score=185.65 Aligned_cols=141 Identities=45% Similarity=0.832 Sum_probs=128.4
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWE 308 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~ 308 (475)
...|+|.+++.|.+..+.|.|.|++|+||+..+..|.+||||++++.+++....+++|++++++.||.|||+|.|.++..
T Consensus 9 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 88 (159)
T 1tjx_A 9 EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 88 (159)
T ss_dssp GCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHH
Confidence 46799999999999999999999999999999999999999999998776666788999999999999999999999888
Q ss_pred ccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCcccccccccccCCCcceeeeeccCCCC
Q psy15955 309 KIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKPDH 371 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~s~ 371 (475)
++....|.|+|||++.++++++||++.|++... +.+.+||.+++..|++.+..||+|.+..
T Consensus 89 ~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~--~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 89 QIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST--GAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC--HHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred HhCCcEEEEEEEECCCCCCCceEEEEEECCCCC--CcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 877778999999999999999999999998654 3577899999999999999999998654
No 9
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=1.6e-24 Score=187.59 Aligned_cols=126 Identities=21% Similarity=0.325 Sum_probs=111.8
Q ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC---CceEEeeeecCCCCceeeeeEEeecc
Q psy15955 99 SENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK---KHRLETKIKRRTLNPRWNETLYFEGF 175 (475)
Q Consensus 99 ~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~---~~~~kT~v~~~~~nP~w~e~f~f~~~ 175 (475)
....|+|++++.|....+.|.|.|++|++|+++|..|.+||||++++.+.. ..++||+++++++||+|||+|.|. +
T Consensus 26 ~~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~-v 104 (155)
T 2z0u_A 26 AVGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVS-M 104 (155)
T ss_dssp --CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEE-C
T ss_pred cCCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEE-c
Confidence 355799999999999999999999999999999999999999999998732 247899999999999999999999 7
Q ss_pred cccccccceEEEEEEeeCCCCCCccccceeeccccccC-CCCcceeeccCC
Q psy15955 176 PIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDL-SEKPTFWKALKP 225 (475)
Q Consensus 176 ~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~-~~~~~~~~~L~~ 225 (475)
+..++....|+|+|||+|.++++++||++.++|.++.. +.....|++|.+
T Consensus 105 ~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 105 SYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp CHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred CHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 76666677999999999999999999999999999963 566789999863
No 10
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.91 E-value=1.3e-23 Score=181.95 Aligned_cols=128 Identities=48% Similarity=0.876 Sum_probs=115.8
Q ss_pred CCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccc
Q psy15955 98 PSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPI 177 (475)
Q Consensus 98 ~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~ 177 (475)
.....|+|.+++.|+...+.|.|+|++|++|+..+..+.+||||+|++.+++..+++|+++++++||+|||+|.|. ++.
T Consensus 24 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~ 102 (152)
T 1rsy_A 24 EEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK-VPY 102 (152)
T ss_dssp --CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEEC-CCH
T ss_pred CCCCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEe-ecH
Confidence 4456899999999999999999999999999999999999999999998776778899999999999999999998 666
Q ss_pred cccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCC
Q psy15955 178 QKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPP 226 (475)
Q Consensus 178 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 226 (475)
.++....|.|+|||+|.++++++||++.++|.++..+.....|++|.+.
T Consensus 103 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 103 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 6666689999999999999999999999999999888888899999763
No 11
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.91 E-value=1.1e-23 Score=180.51 Aligned_cols=125 Identities=49% Similarity=0.897 Sum_probs=115.8
Q ss_pred CcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccc
Q psy15955 100 ENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQK 179 (475)
Q Consensus 100 ~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~ 179 (475)
...|+|.+++.|....+.|.|+|++|++|+..+..+.+||||+|++.+++..+++|+++++++||+|||+|.|. ++..+
T Consensus 18 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~~ 96 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK-VPYSE 96 (143)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEEC-CCHHH
T ss_pred cCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEe-ecHhh
Confidence 45799999999999999999999999999999988999999999998777778999999999999999999998 66666
Q ss_pred cccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCC
Q psy15955 180 LQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKP 225 (475)
Q Consensus 180 ~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~ 225 (475)
+....|+|+|||+|.++++++||++.++|.++..+.....|++|.+
T Consensus 97 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 97 LGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred cCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 6668999999999999999999999999999998888899999976
No 12
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.90 E-value=1e-23 Score=181.88 Aligned_cols=130 Identities=34% Similarity=0.517 Sum_probs=115.5
Q ss_pred CCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCC-CCCCCCcEEEEEEeCCCC--ceEEeeeecCCCCceeeeeEEeec
Q psy15955 98 PSENVGQIHFSLEYDFDNSTLILRVISAKELPAKD-MSGTSDPYVKVALLPDKK--HRLETKIKRRTLNPRWNETLYFEG 174 (475)
Q Consensus 98 ~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~-~~~~~dpyv~v~l~~~~~--~~~kT~v~~~~~nP~w~e~f~f~~ 174 (475)
..+.+|+|.++++|....+.|.|+|++|++|+..+ ..+.+||||+|++.+++. .+++|+++++++||+|||+|.|.
T Consensus 5 ~~~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~- 83 (148)
T 3fdw_A 5 NIFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYE- 83 (148)
T ss_dssp -CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEE-
T ss_pred CCccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEE-
Confidence 35678999999999999999999999999999988 678999999999987653 47899999999999999999999
Q ss_pred ccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCCC
Q psy15955 175 FPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAK 228 (475)
Q Consensus 175 ~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~ 228 (475)
++..++....|.|+|||+|.++++++||++.++|.++..+.....|++|.+...
T Consensus 84 v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 84 IPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKIS 137 (148)
T ss_dssp CCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC--
T ss_pred eChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccc
Confidence 776666677899999999999999999999999999988777889999987653
No 13
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.90 E-value=4.5e-23 Score=175.47 Aligned_cols=125 Identities=26% Similarity=0.443 Sum_probs=111.5
Q ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC-CCceEEeeeecCCCCceeeeeEEeecccc
Q psy15955 99 SENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPD-KKHRLETKIKRRTLNPRWNETLYFEGFPI 177 (475)
Q Consensus 99 ~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~-~~~~~kT~v~~~~~nP~w~e~f~f~~~~~ 177 (475)
....|+|++++.|+...+.|.|+|++|+ ++|..|.+||||+|++.+. +..+++|+++++++||+|||+|.|. ++.
T Consensus 9 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~-v~~ 84 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLP-LAE 84 (138)
T ss_dssp CSSCCEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEE-CCT
T ss_pred CCcceEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEE-ecH
Confidence 3457999999999999999999999999 4677899999999999764 3446799999999999999999999 777
Q ss_pred cccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCC
Q psy15955 178 QKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPA 227 (475)
Q Consensus 178 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~ 227 (475)
.++....|+|+|||+|.++++++||++.++|.++..+.....|++|.+..
T Consensus 85 ~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 85 EELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp TSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 77777899999999999999999999999999998777788999998754
No 14
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.90 E-value=1.7e-23 Score=183.96 Aligned_cols=141 Identities=33% Similarity=0.578 Sum_probs=125.5
Q ss_pred CCcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecc
Q psy15955 228 KDKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPW 307 (475)
Q Consensus 228 ~~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~ 307 (475)
....|+|.+++.|.+..+.|.|.|++|++|+..+..|.+||||++++.+++....+++|++++++.||+|||+|.|.+..
T Consensus 20 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 99 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKH 99 (166)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcch
Confidence 35679999999999999999999999999999999999999999999765544567899999999999999999999988
Q ss_pred cccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCcccccccccccCCCcceeeeeccCCC
Q psy15955 308 EKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKPD 370 (475)
Q Consensus 308 ~~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~s 370 (475)
.++....|.|+|||++.++++++||++.|++.+. +....+|.+++..+++.+..||.|.+.
T Consensus 100 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~--~~~~~~W~~l~~~~~~~~~~Wh~L~~~ 160 (166)
T 2cm5_A 100 SDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAK--GERLKHWYECLKNKDKKIERWHQLQNE 160 (166)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC--HHHHHHHHHHHHCTTCCEEEEEECBC-
T ss_pred HhcCCCEEEEEEEECCCCCCCcEEEeEEEecccC--CchhHHHHHHHhCCCCcceEeeECCCc
Confidence 7877789999999999999999999999999764 346789999999999999999999754
No 15
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.90 E-value=6.7e-23 Score=174.48 Aligned_cols=128 Identities=41% Similarity=0.804 Sum_probs=113.7
Q ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCC-CCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccc
Q psy15955 99 SENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMS-GTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPI 177 (475)
Q Consensus 99 ~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~-~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~ 177 (475)
....|+|.++++|....+.|.|+|++|++|+.++.. +.+||||+|++.+++..+++|+++++++||+|||+|.|..++.
T Consensus 5 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~ 84 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPY 84 (138)
T ss_dssp CCCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCS
T ss_pred CCccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCH
Confidence 355799999999999999999999999999999985 8999999999987666789999999999999999999954666
Q ss_pred cccccceEEEEEEeeCCCCCCccccceeeccccccCCCCc-ceeeccCCC
Q psy15955 178 QKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKP-TFWKALKPP 226 (475)
Q Consensus 178 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~-~~~~~L~~~ 226 (475)
.++....|.|+|||+|.++++++||++.++|.++..+... ..|++|.+.
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 85 TQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp TTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred HHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 6666779999999999999999999999999999876554 467888764
No 16
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.90 E-value=3.9e-24 Score=229.27 Aligned_cols=195 Identities=19% Similarity=0.234 Sum_probs=142.3
Q ss_pred hHHHHHhhhhhhhcccCccccCCCCCCCCCCCCCCCCCcccCCCCCCc-------ccccccccCCCCCCCCccccccccc
Q psy15955 14 TLSRFLSQSVAQLETAGTTVDSNNSKSPVPGSSHAMEGAIASSSSSTP-------LHNKAVANVKAGEHPSSAFMQSRSV 86 (475)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~n~~~g~~~~~~~l~~~~~ 86 (475)
..-+++++++.||||+|+|++|||++|... |..|+++.+-+-+. ..++|..||+||||+||++|+....
T Consensus 587 ~~~~~n~~~l~RvYP~g~R~~SSN~~P~~~----W~~G~QmVAlN~Qt~d~~m~ln~g~F~~nG~cGYVlKP~~lr~~~~ 662 (799)
T 2zkm_X 587 QFVDYNKRQMSRIYPKGTRMDSSNYMPQMF----WNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPDK 662 (799)
T ss_dssp HHHHHHHHSEEEEECCTTCTTCCCCCSHHH----HHTTCSEECBCTTCCSHHHHHHHHHTTTGGGCSEEECCGGGTCTTS
T ss_pred HHHHHhhhcceeeccCCCcCCCCCCCcHHH----HhccceEeeeccccCchHHHHHHhhhhccCCCCceECCHHHhCCCc
Confidence 345789999999999999999999999766 44444444444332 3378999999999999999997543
Q ss_pred ceeeeEeCCCCCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC--C-CceEEee-eec-CC
Q psy15955 87 SLVDMYIDNTEPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPD--K-KHRLETK-IKR-RT 161 (475)
Q Consensus 87 s~~~~~~~~~~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~--~-~~~~kT~-v~~-~~ 161 (475)
.+ ++.......|. ..+.|.|+|++|++|+. +.+||||+|.+.+. + .+++||+ +++ ++
T Consensus 663 ~f-----~p~~~~~~~~~---------~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~ 724 (799)
T 2zkm_X 663 QF-----NPFSVDRIDVV---------VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNS 724 (799)
T ss_dssp CC-----CTTSCCTTTTT---------TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCC
T ss_pred cC-----CCcccccccce---------eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCC
Confidence 22 22222211221 34579999999999985 46899999999642 2 2467999 776 46
Q ss_pred CCceeee-eEEe-ecccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCCCC--cccceeee
Q psy15955 162 LNPRWNE-TLYF-EGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKD--KCGELLTS 237 (475)
Q Consensus 162 ~nP~w~e-~f~f-~~~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~--~~G~l~l~ 237 (475)
+||+||| +|.| . +...++ ..|+|+|||+| +++||++.+||..|..+ ..|++|....+. ..+.|.+.
T Consensus 725 ~NPvWnEe~f~F~~-v~~~el--~~Lr~~V~D~d----~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~ 794 (799)
T 2zkm_X 725 INPVWKEEPFVFEK-ILMPEL--ASLRVAVMEEG----NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIF 794 (799)
T ss_dssp SSCBCCCCCEEEEE-ESSGGG--CEEEEEEEETT----TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEE
T ss_pred CCCeeecceEEEEE-EccCCc--cEEEEEEEEeC----CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEE
Confidence 9999999 6999 6 554544 48999999987 68999999999999653 357788665443 23555555
Q ss_pred eee
Q psy15955 238 LCY 240 (475)
Q Consensus 238 l~~ 240 (475)
+.+
T Consensus 795 i~~ 797 (799)
T 2zkm_X 795 LEM 797 (799)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 17
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=4.1e-23 Score=177.84 Aligned_cols=129 Identities=43% Similarity=0.771 Sum_probs=113.8
Q ss_pred CCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeee
Q psy15955 97 EPSENVGQIHFSLEYDFDNSTLILRVISAKELPAK-DM------SGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNET 169 (475)
Q Consensus 97 ~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~-~~------~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~ 169 (475)
......|+|.+++.|....+.|.|+|++|++|+.. +. .+.+||||+|++.+++.++++|+++++++||+|||+
T Consensus 7 ~~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~ 86 (147)
T 2enp_A 7 GSKYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEER 86 (147)
T ss_dssp SSCCCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBC
T ss_pred CCCCcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeee
Confidence 34466899999999999999999999999999984 43 358999999999877667889999999999999999
Q ss_pred EEeecccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCC
Q psy15955 170 LYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPP 226 (475)
Q Consensus 170 f~f~~~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 226 (475)
|.|. ++..++....|+|+|||+|.++++++||++.++|.++........|+.|.+.
T Consensus 87 f~f~-v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 87 YTFE-IPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp CEEC-CCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEE-eChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9998 6655555678999999999999999999999999999887777889999865
No 18
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.90 E-value=3.3e-24 Score=229.45 Aligned_cols=196 Identities=19% Similarity=0.247 Sum_probs=143.9
Q ss_pred hHHHHHhhhhhhhcccCccccCCCCCCCCCCCCCCCCCcccCCCCCCc-------ccccccccCCCCCCCCccccccccc
Q psy15955 14 TLSRFLSQSVAQLETAGTTVDSNNSKSPVPGSSHAMEGAIASSSSSTP-------LHNKAVANVKAGEHPSSAFMQSRSV 86 (475)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~n~~~g~~~~~~~l~~~~~ 86 (475)
..-+++++++.||||+|+|++|||++|... |..|+++.+-+-+. ..++|..||+||||+||++|+....
T Consensus 634 ~~~~~n~~~l~RvYP~g~RidSSNy~P~~~----W~~G~QmVALN~QT~d~~m~lN~g~F~~nG~cGYVLKP~~lr~~~~ 709 (885)
T 3ohm_B 634 EFVEYNKQQLSRIYPKGTRVDSSNYMPQLF----WNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPDK 709 (885)
T ss_dssp HHHHHHHHSCEEEECCTTCTTCCCCCTHHH----HTTTCSEECBCTTCCSHHHHHHHHHHTTGGGCSEEECCGGGTCTTC
T ss_pred HHHHHhhccceeeccCccccCCCCCCchhh----cccCceeeeecCCCCCcccchhhhhhccCCceeeeecCHHHcCCCc
Confidence 345799999999999999999999999766 44444444444332 3478999999999999999987543
Q ss_pred ceeeeEeCCCCCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC--C-CceEEeeeecC-CC
Q psy15955 87 SLVDMYIDNTEPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPD--K-KHRLETKIKRR-TL 162 (475)
Q Consensus 87 s~~~~~~~~~~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~--~-~~~~kT~v~~~-~~ 162 (475)
.+ ++.......|. ....|.|+|++|++|+.. .+||||+|.+.+. + ..++||+++.+ ++
T Consensus 710 ~f-----~p~~~~~~~~~---------~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~Ngl 771 (885)
T 3ohm_B 710 SF-----DPFTEVIVDGI---------VANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSF 771 (885)
T ss_dssp CC-----CTTCSSCCTTC---------CCEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSS
T ss_pred Cc-----CCCcCcccCcc---------cceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCc
Confidence 22 23222222221 234799999999999863 5899999999642 2 23578998875 69
Q ss_pred Cceeee-eEEeecccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCCCCc--ccceeeeee
Q psy15955 163 NPRWNE-TLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDK--CGELLTSLC 239 (475)
Q Consensus 163 nP~w~e-~f~f~~~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~--~G~l~l~l~ 239 (475)
||+||| +|.|..+...+ ...|+|+|||+| +++||++++||..|..+ -.+++|....+.. .|.|.+.+.
T Consensus 772 NPvWnEe~F~F~~V~~pe--la~Lrf~V~D~d----ddfiG~~~lpL~~L~~G---yR~vpL~~~~g~~l~~atLfv~i~ 842 (885)
T 3ohm_B 772 NPVWDEEPFDFPKVVLPT--LASLRIAAFEEG----GKFVGHRILPVSAIRSG---YHYVCLRNEANQPLCLPALLIYTE 842 (885)
T ss_dssp SCBCCCCCEEEEEESCGG--GCEEEEEEEETT----TEEEEEEEEETTTCCCE---EEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCeeccceeEEeeEEcCC--cCEEEEEEEcCC----ccEEeeEEEEHHHcCCC---ceEEEecCCCCCccCceEEEEEEE
Confidence 999999 69997333344 348999999987 78999999999999754 3467887766543 566666665
Q ss_pred e
Q psy15955 240 Y 240 (475)
Q Consensus 240 ~ 240 (475)
+
T Consensus 843 ~ 843 (885)
T 3ohm_B 843 A 843 (885)
T ss_dssp E
T ss_pred E
Confidence 4
No 19
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.90 E-value=6.6e-23 Score=172.40 Aligned_cols=123 Identities=29% Similarity=0.616 Sum_probs=105.7
Q ss_pred cccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC--CceEEeeeecCCCCceeeeeEEeeccccc
Q psy15955 101 NVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK--KHRLETKIKRRTLNPRWNETLYFEGFPIQ 178 (475)
Q Consensus 101 ~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~--~~~~kT~v~~~~~nP~w~e~f~f~~~~~~ 178 (475)
..|+|.++++|+...+.|.|+|++|++|+..+..+.+||||+|++.+++ ..+++|+++++++||+|||+|.|..++..
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 4799999999999999999999999999999999999999999997654 46789999999999999999999854555
Q ss_pred ccccceEEEEEEeeCCCCC--CccccceeeccccccCCCCcceeeccC
Q psy15955 179 KLQSRVLHLHVFDYDRFSR--DDSIGEVFLPLCQVDLSEKPTFWKALK 224 (475)
Q Consensus 179 ~~~~~~L~~~V~d~d~~~~--~~~iG~~~i~l~~l~~~~~~~~~~~L~ 224 (475)
++....|.|+|||+|..++ +++||++.++|.++.... ...|++|+
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 6667899999999999887 999999999999997655 78999984
No 20
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.89 E-value=1.3e-22 Score=173.70 Aligned_cols=130 Identities=38% Similarity=0.626 Sum_probs=113.1
Q ss_pred CCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC--CceEEeeeecCCCCceeeeeEEeec
Q psy15955 97 EPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK--KHRLETKIKRRTLNPRWNETLYFEG 174 (475)
Q Consensus 97 ~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~--~~~~kT~v~~~~~nP~w~e~f~f~~ 174 (475)
......|+|.+++.|....+.|.|+|++|++|+..+..+.+||||+|++.++. ...+||+++++++||+|||+|.|..
T Consensus 10 ~~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~ 89 (142)
T 2chd_A 10 DQATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHG 89 (142)
T ss_dssp ----CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEES
T ss_pred CCCCccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcc
Confidence 44566899999999999999999999999999999999999999999997643 3578999999999999999999985
Q ss_pred ccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCC
Q psy15955 175 FPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPP 226 (475)
Q Consensus 175 ~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 226 (475)
++..++....|+|+|||+|.++++++||++.++|.++..+.....|++|..+
T Consensus 90 ~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~p 141 (142)
T 2chd_A 90 ITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLERV 141 (142)
T ss_dssp CCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBCC
T ss_pred cCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecccC
Confidence 5555555578999999999999999999999999999988888889988653
No 21
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.89 E-value=1e-22 Score=174.08 Aligned_cols=128 Identities=28% Similarity=0.594 Sum_probs=112.8
Q ss_pred CcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC--CceEEeeeecCCCCceeeeeEEeecccc
Q psy15955 100 ENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK--KHRLETKIKRRTLNPRWNETLYFEGFPI 177 (475)
Q Consensus 100 ~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~--~~~~kT~v~~~~~nP~w~e~f~f~~~~~ 177 (475)
...|+|.+++.|....+.|.|+|++|++|+.++..+.+||||+|++.+++ ..+++|+++++++||+|||+|.|..++.
T Consensus 5 ~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 84 (141)
T 1v27_A 5 SSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 84 (141)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCT
T ss_pred CcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCH
Confidence 45799999999999999999999999999999999999999999997643 4577999999999999999999985455
Q ss_pred cccccceEEEEEEeeCCCCC--CccccceeeccccccCCCCcceeeccCCCCC
Q psy15955 178 QKLQSRVLHLHVFDYDRFSR--DDSIGEVFLPLCQVDLSEKPTFWKALKPPAK 228 (475)
Q Consensus 178 ~~~~~~~L~~~V~d~d~~~~--~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~ 228 (475)
.++....|.|+|||+|..++ +++||++.++|.++.... ...|++|.+...
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~ 136 (141)
T 1v27_A 85 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDS 136 (141)
T ss_dssp TGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSS
T ss_pred HHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccccc
Confidence 56666899999999999887 999999999999987654 789999987643
No 22
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.89 E-value=1.5e-23 Score=223.47 Aligned_cols=198 Identities=19% Similarity=0.224 Sum_probs=141.2
Q ss_pred HHHHHhhhhhhhcccCccccCCCCCCCCCCCCCCCCCcccCCCC---CCcccccccccCCCCCCCCcccccccccceeee
Q psy15955 15 LSRFLSQSVAQLETAGTTVDSNNSKSPVPGSSHAMEGAIASSSS---STPLHNKAVANVKAGEHPSSAFMQSRSVSLVDM 91 (475)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~n~~~g~~~~~~~l~~~~~s~~~~ 91 (475)
.-+++++++.||||+|+|+||||++|...|...+...+.+=++. ++...++|..||+||||+||++|+.....+
T Consensus 560 ~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVALN~QT~d~~m~LN~g~F~~nG~cGYVLKP~~lr~~~~~f--- 636 (816)
T 3qr0_A 560 FVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLDKRF--- 636 (816)
T ss_dssp HHHHTTTSCEEEECCTTCTTCCCCCTHHHHTTTCSEECBCTTCCSHHHHHHHHHTTTTTTCSEEECCHHHHCTTCCC---
T ss_pred HHHhhhcccceeCCCccccCCCCCCchhhcccCceEEeecCcCCChhhhhhhhhhccCCceeeeecChHhcCCCccc---
Confidence 44688999999999999999999999766444444433333222 122347899999999999999998754222
Q ss_pred EeCCCCCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC--CC--ceEEeeeecC-CCCcee
Q psy15955 92 YIDNTEPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPD--KK--HRLETKIKRR-TLNPRW 166 (475)
Q Consensus 92 ~~~~~~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~--~~--~~~kT~v~~~-~~nP~w 166 (475)
++.......|. ....|.|+|++|++|+.. .+||||+|.+.+. +. .++||+++.+ ++||+|
T Consensus 637 --~p~~~~~~~~~---------~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvW 701 (816)
T 3qr0_A 637 --DPFTESTVDGV---------VAGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYY 701 (816)
T ss_dssp --CTTCCSCCTTS---------CCEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBC
T ss_pred --CCCCCCCcCCc---------cceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeE
Confidence 22222221221 234799999999999864 5899999999643 22 4679998875 699999
Q ss_pred eee-EEeecccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCCCCcc--cceeeeee
Q psy15955 167 NET-LYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDKC--GELLTSLC 239 (475)
Q Consensus 167 ~e~-f~f~~~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~--G~l~l~l~ 239 (475)
||+ |.|..+...++ ..|+|+|||++ +++||++++||+.|..| -.+++|....+... +.|.+.+.
T Consensus 702 NE~~F~F~~v~~pel--a~Lrf~V~D~d----ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~~~~~atLfv~i~ 768 (816)
T 3qr0_A 702 DEKVFVFKKVVLPDL--AVVRIIVSEEN----GKFIGHRVMPLDGIKPG---YRHVPLRNESNRPLGLASVFAHIV 768 (816)
T ss_dssp CCCCEEEEEESCGGG--CEEEEEEEETT----SCEEEEEEEESTTCCCE---EEEEEEECTTSCEEEEEEEEEEEE
T ss_pred cCceeEEccccCCCc--cEEEEEEEecC----CCeeeEEEEEHHHcCCc---ceEEEEeCCCCCCCCceEEEEEEE
Confidence 998 99973333443 58999999985 68999999999999764 34678876655432 44544443
No 23
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.89 E-value=9.9e-23 Score=176.57 Aligned_cols=137 Identities=23% Similarity=0.354 Sum_probs=115.5
Q ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC--CceEEeeeecCCCCceeeeeEEeeccc
Q psy15955 99 SENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK--KHRLETKIKRRTLNPRWNETLYFEGFP 176 (475)
Q Consensus 99 ~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~--~~~~kT~v~~~~~nP~w~e~f~f~~~~ 176 (475)
....|++.+++.|....+.|.|+|++|++|+..+ .+.+||||+|++.+.. ..+++|+++++++||+|||+|.|. ++
T Consensus 10 ~~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~ 87 (153)
T 3fbk_A 10 HKVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFP-VQ 87 (153)
T ss_dssp ---CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEE-CC
T ss_pred cCCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEe-cc
Confidence 4557999999999999999999999999999999 6999999999997643 457899999999999999999998 65
Q ss_pred ccccccceEEEEEEeeCCCCC-CccccceeeccccccC-CCCcceeeccCCCCCCcccceeeee
Q psy15955 177 IQKLQSRVLHLHVFDYDRFSR-DDSIGEVFLPLCQVDL-SEKPTFWKALKPPAKDKCGELLTSL 238 (475)
Q Consensus 177 ~~~~~~~~L~~~V~d~d~~~~-~~~iG~~~i~l~~l~~-~~~~~~~~~L~~~~~~~~G~l~l~l 238 (475)
...+. ..|.|+|||+|.+++ +++||++.++|.++.. +.....|++|.+......+.+.+..
T Consensus 88 ~~~~~-~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g~~~~lkv~~ 150 (153)
T 3fbk_A 88 EEDDQ-KRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLGRTKHLKVAR 150 (153)
T ss_dssp GGGTT-SEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGGGTCCCBCCC
T ss_pred cHHhC-CEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhcccccceecc
Confidence 55554 359999999999876 8999999999999974 6677899999987766666666554
No 24
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.89 E-value=3.9e-23 Score=176.89 Aligned_cols=127 Identities=35% Similarity=0.691 Sum_probs=111.7
Q ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCC-----------ceEEeeeecCCCCceee
Q psy15955 99 SENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK-----------HRLETKIKRRTLNPRWN 167 (475)
Q Consensus 99 ~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~-----------~~~kT~v~~~~~nP~w~ 167 (475)
+...|+|++++.|. .+.|.|+|++|++|+.++..|.+||||+|++.+... .+++|+++++++||+||
T Consensus 3 ~~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wn 80 (142)
T 1rh8_A 3 HPITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWN 80 (142)
T ss_dssp CCCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEE
T ss_pred CCcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCC
Confidence 45689999999997 789999999999999999999999999999975432 24689999999999999
Q ss_pred eeEEeecccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCC
Q psy15955 168 ETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPA 227 (475)
Q Consensus 168 e~f~f~~~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~ 227 (475)
|+|.|..++..++....|.|+|||+|.++++++||++.++|.++..+.....|++|.+..
T Consensus 81 e~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 81 QTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred CEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 999997556666667799999999999999999999999999998777778999998753
No 25
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.88 E-value=1.3e-22 Score=194.58 Aligned_cols=202 Identities=26% Similarity=0.393 Sum_probs=144.0
Q ss_pred cccccccchhhHHHHHhhhhhhhccc---CccccCCCCCCCCCCCCCCCCCcccCCCCCCcccccccccCCCCCCCCccc
Q psy15955 4 GFKNHAISKLTLSRFLSQSVAQLETA---GTTVDSNNSKSPVPGSSHAMEGAIASSSSSTPLHNKAVANVKAGEHPSSAF 80 (475)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~g~~~~~~~ 80 (475)
-+|++++.+++||.|.|+|.+.+... ...+....++.+..+.+..++.+...-..... +.
T Consensus 55 ~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~--------~~--------- 117 (284)
T 2r83_A 55 KFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF--------GH--------- 117 (284)
T ss_dssp CEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCC--------SS---------
T ss_pred eEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhccc--------CC---------
Confidence 47899999999999999999987642 23355555555433333333322211100000 00
Q ss_pred ccccccceeeeEeCCCCCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCC--ceEEeeee
Q psy15955 81 MQSRSVSLVDMYIDNTEPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK--HRLETKIK 158 (475)
Q Consensus 81 l~~~~~s~~~~~~~~~~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~ 158 (475)
.......+...........|.|.+++.|.+..+.|.|.|++|++|+..+..+.+||||+|++.+++. .+++|+++
T Consensus 118 ---~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~ 194 (284)
T 2r83_A 118 ---VTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIK 194 (284)
T ss_dssp ---CEEEEEECBCCSSCCCCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCC
T ss_pred ---cceeEEEeeccccccccccccEEEEEEecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeecccee
Confidence 0000000001111123457999999999999999999999999999999999999999999976443 35799999
Q ss_pred cCCCCceeeeeEEeecccccccccceEEEEEEeeCCCCCCccccceeeccccc------------cCCCCcceeeccCCC
Q psy15955 159 RRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQV------------DLSEKPTFWKALKPP 226 (475)
Q Consensus 159 ~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l------------~~~~~~~~~~~L~~~ 226 (475)
++++||+|||+|.|. ++..++....|.|+|||+|.++++++||++.+++..+ ..+.....|++|.+.
T Consensus 195 ~~t~nP~wne~f~f~-v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 195 KNTLNPYYNESFSFE-VPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp CSCSSCEEEEEEEEE-CCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred cCCCCCEEceeEEEe-CCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 999999999999999 6767776778999999999999999999999999763 123344689988763
No 26
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.88 E-value=4.1e-22 Score=168.54 Aligned_cols=123 Identities=33% Similarity=0.575 Sum_probs=106.2
Q ss_pred cEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC--CCceEEeeeecCCCCceeeeeEEeeccccccc
Q psy15955 103 GQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPD--KKHRLETKIKRRTLNPRWNETLYFEGFPIQKL 180 (475)
Q Consensus 103 G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~--~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~ 180 (475)
|.+.+.+.|+...+.|.|+|++|++|+. +..+.+||||+|++.++ +..++||+++++++||+|||+|.|..++..++
T Consensus 7 ~~~~~~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l 85 (134)
T 2b3r_A 7 GSGAVKLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETL 85 (134)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHH
T ss_pred ccEEEEEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHh
Confidence 4455666777789999999999999997 77889999999999765 34578999999999999999999984555566
Q ss_pred ccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCC
Q psy15955 181 QSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPP 226 (475)
Q Consensus 181 ~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 226 (475)
....|.|+|||+|.++++++||++.++|.++..+.....|++|.+.
T Consensus 86 ~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 86 RQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred CcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 6679999999999999999999999999999888888899999764
No 27
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.87 E-value=1.5e-22 Score=175.27 Aligned_cols=125 Identities=17% Similarity=0.203 Sum_probs=106.1
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCc-eeeeeeecccccCCCCCeecceEEEeecc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGE-KRIEKRKTQIFKCNLNPVFNESFSFNVPW 307 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~-~~~~~~~T~~~~~t~nP~w~e~f~f~v~~ 307 (475)
...|+|++++.|.+..+.|.|.|++|+||++++..|.+||||++++.+.. ....+++|+++++++||+|||+|.|.++.
T Consensus 27 ~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 27 VGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp -CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred CCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 46799999999999999999999999999999999999999999997632 22346899999999999999999999988
Q ss_pred cccccceEEEEEEeccCCCCCeeeEEEEEcCcCCC-CCccccccccc
Q psy15955 308 EKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGS-GASETKHWQDM 353 (475)
Q Consensus 308 ~~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~-~~~~~~~w~~~ 353 (475)
.++....|.|+|||++.++++++||++.|++.+.. .+....+|+++
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L 153 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNL 153 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEE
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEc
Confidence 77777889999999999999999999999987653 23333444443
No 28
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.87 E-value=1e-21 Score=171.35 Aligned_cols=127 Identities=35% Similarity=0.637 Sum_probs=110.2
Q ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCC--ceEEeeeecCCCCceeeeeEEeeccc
Q psy15955 99 SENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK--HRLETKIKRRTLNPRWNETLYFEGFP 176 (475)
Q Consensus 99 ~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~~~~~nP~w~e~f~f~~~~ 176 (475)
....|+|.+++.|....+.|.|+|++|++|+..+..+.+||||+|++.+++. .+++|+++++++||+|||+|.|. ++
T Consensus 8 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~ 86 (159)
T 1tjx_A 8 LEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFE-VP 86 (159)
T ss_dssp GGCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEE-CC
T ss_pred cCcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEE-cC
Confidence 4568999999999999999999999999999999999999999999975443 46799999999999999999999 66
Q ss_pred ccccccceEEEEEEeeCCCCCCccccceeeccccc------------cCCCCcceeeccCCC
Q psy15955 177 IQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQV------------DLSEKPTFWKALKPP 226 (475)
Q Consensus 177 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l------------~~~~~~~~~~~L~~~ 226 (475)
..++....|.|+|||+|.++++++||++.+++..+ ..+.....|++|.+.
T Consensus 87 ~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 87 FEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp GGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred HHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 66666678999999999999999999999999854 233455689988763
No 29
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.87 E-value=1.2e-21 Score=166.57 Aligned_cols=120 Identities=37% Similarity=0.651 Sum_probs=104.0
Q ss_pred ccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCC--ceEEeeeecCCCCceeeeeEEeecccccc
Q psy15955 102 VGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK--HRLETKIKRRTLNPRWNETLYFEGFPIQK 179 (475)
Q Consensus 102 ~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~~~~~nP~w~e~f~f~~~~~~~ 179 (475)
+|+|.+++.|....+.|.|+|++|++|+..+..+.+||||+|++.+.+. .+++|+++++++||+|||+|.|. ++...
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~-v~~~~ 80 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFD-IPTEK 80 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEE-CCGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEE-CChhh
Confidence 6999999999999999999999999999999999999999999975433 36799999999999999999999 77666
Q ss_pred cccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccC
Q psy15955 180 LQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALK 224 (475)
Q Consensus 180 ~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~ 224 (475)
+....|.|+|||+|.++++++||++.++|.++. .....|++|.
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~ 123 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP--GEVKHWKDMI 123 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH--HHHHHHHHHH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCC--hHHHHHHHHH
Confidence 666789999999999999999999999998752 2234455553
No 30
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.87 E-value=2.4e-21 Score=170.20 Aligned_cols=113 Identities=36% Similarity=0.582 Sum_probs=101.7
Q ss_pred CCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC--CceEEeeeecCCCCceeeeeEEeecc
Q psy15955 98 PSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK--KHRLETKIKRRTLNPRWNETLYFEGF 175 (475)
Q Consensus 98 ~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~--~~~~kT~v~~~~~nP~w~e~f~f~~~ 175 (475)
+....|+|.+++.|....+.|.|+|++|++|+..+..|.+||||+|++.+.. ..+++|+++++++||+|||+|.|. +
T Consensus 19 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 97 (166)
T 2cm5_A 19 DIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYD-I 97 (166)
T ss_dssp -CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEE-C
T ss_pred CcCccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEE-c
Confidence 3566899999999999999999999999999999999999999999997643 357899999999999999999999 6
Q ss_pred cccccccceEEEEEEeeCCCCCCccccceeeccccc
Q psy15955 176 PIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQV 211 (475)
Q Consensus 176 ~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l 211 (475)
+..++....|.|+|||+|.++++++||++.++|.++
T Consensus 98 ~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 98 KHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp CGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred chHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 666666779999999999999999999999999885
No 31
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.87 E-value=1.2e-21 Score=166.49 Aligned_cols=122 Identities=34% Similarity=0.563 Sum_probs=107.0
Q ss_pred CcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC--CCceEEeeeecCCCCceeeeeEEeecccc
Q psy15955 100 ENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPD--KKHRLETKIKRRTLNPRWNETLYFEGFPI 177 (475)
Q Consensus 100 ~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~--~~~~~kT~v~~~~~nP~w~e~f~f~~~~~ 177 (475)
+.+|+|.++++| ..+.|.|+|++|++|+..+..+.+||||+|++.++ +..+++|+++++++||+|||+|.|. +..
T Consensus 2 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~-~~~ 78 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFK-LKP 78 (137)
T ss_dssp CCCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEE-CCG
T ss_pred CcceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEE-cCc
Confidence 468999999999 67999999999999999999999999999999754 3457899999999999999999998 443
Q ss_pred cccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCC
Q psy15955 178 QKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPP 226 (475)
Q Consensus 178 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 226 (475)
.+. ...|.|+|||+|..+++++||++.++|.++..+. ...|++|.+.
T Consensus 79 ~~~-~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 79 SDK-DRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp GGG-GCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred hhc-CCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 333 3579999999999999999999999999997655 6899999764
No 32
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.86 E-value=3.9e-22 Score=172.91 Aligned_cols=125 Identities=34% Similarity=0.518 Sum_probs=100.5
Q ss_pred CCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCc--eEEeeeecCCCCceeeeeEEeecc
Q psy15955 98 PSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKH--RLETKIKRRTLNPRWNETLYFEGF 175 (475)
Q Consensus 98 ~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~--~~kT~v~~~~~nP~w~e~f~f~~~ 175 (475)
.....|+|.++++|....+.|.|+|++|++|+..+..+.+||||+|++.+++.. ++||+++++++||+|||+|.|. +
T Consensus 12 ~~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 90 (153)
T 1w15_A 12 IPSGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFD-I 90 (153)
T ss_dssp ----CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEE-C
T ss_pred CCccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEE-C
Confidence 345689999999999999999999999999999999999999999999765433 5799999999999999999999 6
Q ss_pred cccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCC
Q psy15955 176 PIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKP 225 (475)
Q Consensus 176 ~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~ 225 (475)
+..++....|.|+|||+|.++++++||++.+++.+ .+.....|++|..
T Consensus 91 ~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 91 PCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp CSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred CHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 66666667899999999999999999999999988 3334456777654
No 33
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.7e-21 Score=166.54 Aligned_cols=128 Identities=29% Similarity=0.476 Sum_probs=110.2
Q ss_pred CCcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecc
Q psy15955 228 KDKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPW 307 (475)
Q Consensus 228 ~~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~ 307 (475)
....|+|.+++.|.+..+.|.|.|++|++|+..+..+ +||||++++.+++....+++|++++++.||+|||+|.|.++.
T Consensus 7 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp SCSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CCCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 3467999999999999999999999999999999888 999999999876655567899999999999999999999987
Q ss_pred cccccceEEEEEEeccCCCC--CeeeEEEEEcCcCCCCCcccccccccccC
Q psy15955 308 EKIRECSLNVMVMDFDNIGR--NELIGRILLAGKNGSGASETKHWQDMITK 356 (475)
Q Consensus 308 ~~l~~~~l~i~V~d~~~~~~--d~~lG~~~i~l~~~~~~~~~~~w~~~~~~ 356 (475)
.++....|.|+|||++.+++ +++||++.|++.+........+|.++...
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 77766789999999998764 57999999999776655566677766543
No 34
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.86 E-value=2.4e-21 Score=170.95 Aligned_cols=125 Identities=33% Similarity=0.519 Sum_probs=106.2
Q ss_pred CCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCC-CCCCCcEEEEEEeCCCC--ceEEeeeecCCCCceeeeeEEee
Q psy15955 97 EPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDM-SGTSDPYVKVALLPDKK--HRLETKIKRRTLNPRWNETLYFE 173 (475)
Q Consensus 97 ~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~-~~~~dpyv~v~l~~~~~--~~~kT~v~~~~~nP~w~e~f~f~ 173 (475)
......|+|.++++| ..+.|.|+|++|++|+.+|. .+.+||||+|++.+.+. .++||+++++++||+|||+|.|.
T Consensus 13 ~~~~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~ 90 (171)
T 2q3x_A 13 LATPAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFD 90 (171)
T ss_dssp ----CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECS
T ss_pred CCCCCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEE
Confidence 334567999999999 68999999999999999995 79999999999976443 36799999999999999999998
Q ss_pred cccccccccceEEEEEE-eeCCCCCCccccceeeccccccCCCCcceeeccCCCC
Q psy15955 174 GFPIQKLQSRVLHLHVF-DYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPA 227 (475)
Q Consensus 174 ~~~~~~~~~~~L~~~V~-d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~ 227 (475)
++. ....|.|+|| |+|.++++++||++.++|.++..+.....|++|.+..
T Consensus 91 -v~~---~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 91 -ESP---QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp -SCC---TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred -ecC---CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 432 3578999999 9999999999999999999998888888999998753
No 35
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=2.6e-21 Score=167.46 Aligned_cols=124 Identities=36% Similarity=0.618 Sum_probs=107.5
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWE 308 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~ 308 (475)
...|+|.+++.|.+..+.|.|+|++|++|+..+..+.+||||++++.+++. .+++|++++++.||+|||+|.|.++..
T Consensus 26 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~v~~~ 103 (152)
T 1rsy_A 26 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFKVPYS 103 (152)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC--SCEECCCCTTCSSCEEEEEEEECCCHH
T ss_pred CCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC--ceEeccccCCCCCCcCcccEEEeecHH
Confidence 467999999999999999999999999999999999999999999876543 467999999999999999999999877
Q ss_pred ccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCcccccccccc
Q psy15955 309 KIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMI 354 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~ 354 (475)
++....|.|+|||++.++++++||++.|++.+...+....+|.++.
T Consensus 104 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 104 ELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred HcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECC
Confidence 7767789999999999999999999999987665444445555543
No 36
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.86 E-value=1.9e-22 Score=194.29 Aligned_cols=189 Identities=23% Similarity=0.323 Sum_probs=136.4
Q ss_pred cccccccchhhHHHHHhhhhhhhccc---CccccCCCCCCCCCCCCCCCCCcccCCCCCCcccccccccCCCCCCCCccc
Q psy15955 4 GFKNHAISKLTLSRFLSQSVAQLETA---GTTVDSNNSKSPVPGSSHAMEGAIASSSSSTPLHNKAVANVKAGEHPSSAF 80 (475)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~g~~~~~~~ 80 (475)
-+|++++.+++||.|.|+|.+.+... ...+..+.++.+..+.+..++....+.- . .....+. +. .
T Consensus 56 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l-~-----~~~~~~~-~~---~-- 123 (296)
T 1dqv_A 56 KFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNL-L-----ELAEQPP-DR---P-- 123 (296)
T ss_dssp CEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCT-T-----GGGSSCS-SC---C--
T ss_pred eEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccc-c-----ccccCCc-cc---e--
Confidence 47999999999999999999987533 2235555566554433333333322100 0 0000000 00 0
Q ss_pred ccccccceeeeEeCCCCCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCC--ceEEeeee
Q psy15955 81 MQSRSVSLVDMYIDNTEPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK--HRLETKIK 158 (475)
Q Consensus 81 l~~~~~s~~~~~~~~~~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~ 158 (475)
....+. .........|+|.+++.|....+.|.|.|++|++|+.+|..|.+||||+|++.+++. .++||+++
T Consensus 124 ------~w~~L~-~~~~~~~~~G~i~vsl~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~ 196 (296)
T 1dqv_A 124 ------LWRDIL-EGGSEKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIK 196 (296)
T ss_dssp ------CCEECB-CCSSCCSCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCC
T ss_pred ------eeeccc-cccccccccceEEEEEEeccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceeccee
Confidence 000000 011123457999999999999999999999999999999999999999999975442 56899999
Q ss_pred cCCCCceeeeeEEeecccccccccceEEEEEEeeCCCCCCccccceeecccccc
Q psy15955 159 RRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVD 212 (475)
Q Consensus 159 ~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~ 212 (475)
++++||+|||+|.|. ++...+....|.|+|||+|.++++++||.+.+++.++.
T Consensus 197 ~~t~nP~wne~f~f~-v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 197 KNTLNPTYNEALVFD-VAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp CSCSSCEEEECCCCC-CCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTC
T ss_pred cCCCCCeECceEEEE-cCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCC
Confidence 999999999999998 66666666789999999999999999999999998763
No 37
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.86 E-value=9.5e-22 Score=169.43 Aligned_cols=114 Identities=25% Similarity=0.419 Sum_probs=102.8
Q ss_pred CCcccceeeeeeecCCceeEEEEEEeeccCcccc-cCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeec
Q psy15955 228 KDKCGELLTSLCYHPSNSVLTITLLKARNLKAKD-INGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVP 306 (475)
Q Consensus 228 ~~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~-~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~ 306 (475)
....|+|.+++.|.+..+.|.|.|++|++|+..+ ..+.+||||++++.+++....+++|++++++.||.|||+|.|.++
T Consensus 6 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 3567999999999999999999999999999888 688999999999986665456789999999999999999999998
Q ss_pred ccccccceEEEEEEeccCCCCCeeeEEEEEcCcCC
Q psy15955 307 WEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNG 341 (475)
Q Consensus 307 ~~~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~ 341 (475)
..++....|.|+|||++.++++++||++.|++.+.
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l 120 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSW 120 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHH
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccc
Confidence 88877788999999999999999999999987543
No 38
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=1.2e-20 Score=160.36 Aligned_cols=122 Identities=19% Similarity=0.269 Sum_probs=104.6
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWE 308 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~ 308 (475)
...|+|++++.|.+..+.|.|.|++|++ ++..|.+||||++++.+++. ..+++|+++++++||+|||+|.|.++..
T Consensus 10 ~~~G~l~~sl~y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~-~~~~kT~v~~~tlnP~wnE~f~f~v~~~ 85 (138)
T 1wfm_A 10 NQAPKLHYCLDYDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTG-SVEAQTALKKRQLHTTWEEGLVLPLAEE 85 (138)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTE-EEEEECCCCCCCSSEECSSCEEEECCTT
T ss_pred CcceEEEEEEEEeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCC-cccEecccCcCCCCCcCCceEEEEecHH
Confidence 4679999999999999999999999994 67789999999999976433 2467999999999999999999999888
Q ss_pred ccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCcccccccccc
Q psy15955 309 KIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMI 354 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~ 354 (475)
++....|.|+|||++.++++++||++.+++.+........+|.++.
T Consensus 86 ~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~ 131 (138)
T 1wfm_A 86 ELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELK 131 (138)
T ss_dssp SSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECC
T ss_pred HcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCc
Confidence 8877899999999999999999999999997765444455555544
No 39
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=5.6e-21 Score=162.98 Aligned_cols=125 Identities=26% Similarity=0.359 Sum_probs=106.8
Q ss_pred CCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeeccccccc-ccceEEEEEEee
Q psy15955 114 DNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKL-QSRVLHLHVFDY 192 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~-~~~~L~~~V~d~ 192 (475)
..+.|.|+|++|++|+..+. +.+||||+|++. .++++|+++++++||+|||+|.|. +....+ ....|.|+|||+
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~---~~~~kT~v~~~t~nP~wne~f~f~-v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK---DEKKKTKKVDNELNPVWNEILEFD-LRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS---SCEEECCCCCSCSSCEEEEEEEEE-CSSCCCCTTCEEEEEEEET
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC---CEeEEeeeecCCCCCccCcEEEEE-ecccccCCCCEEEEEEEEC
Confidence 45689999999999999998 999999999984 457899999999999999999998 433222 357899999999
Q ss_pred CCCCCCccccceeeccccccCCCCcceeec---cCCCCC-CcccceeeeeeecCC
Q psy15955 193 DRFSRDDSIGEVFLPLCQVDLSEKPTFWKA---LKPPAK-DKCGELLTSLCYHPS 243 (475)
Q Consensus 193 d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~---L~~~~~-~~~G~l~l~l~~~~~ 243 (475)
|..+++++||++.++|.++..+.....|+. |....+ ...|+|++++.|.|.
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 999999999999999999988887789988 554433 466999999999874
No 40
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.85 E-value=4.2e-21 Score=164.37 Aligned_cols=123 Identities=37% Similarity=0.628 Sum_probs=107.2
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWE 308 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~ 308 (475)
...|+|.+++.|.+..+.|.|+|++|++|+..+..+.+||||++++.+++. .+++|++++++.||.|||+|.|.++..
T Consensus 18 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f~f~v~~~ 95 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFKVPYS 95 (143)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS--CCEECCCCCSCSSCEEEEEEEECCCHH
T ss_pred cCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC--ccEECccCcCCCCCcCcCeEEEeecHh
Confidence 467999999999999999999999999999999999999999999876543 467999999999999999999999877
Q ss_pred ccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCccccccccc
Q psy15955 309 KIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDM 353 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~ 353 (475)
++....|.|+|||++.++++++||++.|++.+...+....+|.++
T Consensus 96 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 140 (143)
T 3f04_A 96 ELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDL 140 (143)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEEC
T ss_pred hcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEEC
Confidence 777788999999999999999999999998766554444455443
No 41
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.85 E-value=5.8e-21 Score=160.47 Aligned_cols=113 Identities=26% Similarity=0.468 Sum_probs=96.5
Q ss_pred cccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEe-eccc
Q psy15955 230 KCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFN-VPWE 308 (475)
Q Consensus 230 ~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~-v~~~ 308 (475)
..|+|.+++.|.+..+.|.|.|++|++|+..+..+.+||||++++.+++....+++|++++++.||.|||+|.|. ++.+
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 469999999999999999999999999999999999999999999776545567899999999999999999999 4656
Q ss_pred ccccceEEEEEEeccCCCC--CeeeEEEEEcCcCCC
Q psy15955 309 KIRECSLNVMVMDFDNIGR--NELIGRILLAGKNGS 342 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~--d~~lG~~~i~l~~~~ 342 (475)
++....|.|+|||++..++ +++||++.+++.+..
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~ 118 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETAL 118 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccC
Confidence 6667789999999999887 999999999886543
No 42
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.85 E-value=9.8e-21 Score=163.23 Aligned_cols=124 Identities=33% Similarity=0.538 Sum_probs=106.3
Q ss_pred CCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC--CceEEeeeecCCCCceeeeeEEeecc
Q psy15955 98 PSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK--KHRLETKIKRRTLNPRWNETLYFEGF 175 (475)
Q Consensus 98 ~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~--~~~~kT~v~~~~~nP~w~e~f~f~~~ 175 (475)
..+..|+|.++++| ..+.|.|+|++|++|+..+..+.+||||+|++.+++ ..++||+++++++||+|||+|.|. +
T Consensus 15 ~~~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 91 (149)
T 1a25_A 15 SMERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQ-L 91 (149)
T ss_dssp --CTTCEEEEEEEE--SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEE-C
T ss_pred CCCcceEEEEEEEe--cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEE-e
Confidence 34567999999999 478999999999999999999999999999997643 457899999999999999999998 4
Q ss_pred cccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCC
Q psy15955 176 PIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPP 226 (475)
Q Consensus 176 ~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 226 (475)
...++ ...|.|+|||+|.++++++||++.++|.++..+ ....|++|.+.
T Consensus 92 ~~~~~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 92 KESDK-DRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp CSGGG-GCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred ccccC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 43333 357999999999999999999999999999765 46789999764
No 43
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=3.4e-21 Score=162.76 Aligned_cols=123 Identities=29% Similarity=0.407 Sum_probs=104.9
Q ss_pred EEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccceEEEEE
Q psy15955 110 EYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHV 189 (475)
Q Consensus 110 ~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V 189 (475)
+|....+.|.|+|++|++|+..+..|.+||||++++. .+.++|+++++++||+|||+|.|. +. .. ...|.|+|
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~-~~--~~-~~~l~i~V 79 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELG---NDRLQTHTVYKNLNPEWNKVFTFP-IK--DI-HDVLEVTV 79 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET---TEEEECCCCSSCSSCCCCEEEEEE-ES--CT-TCEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC---CEEEEeeeecCCCCCccccEEEEE-ec--CC-CCEEEEEE
Confidence 3445677899999999999999999999999999993 357899999999999999999998 33 32 46899999
Q ss_pred EeeCCCCCCccccceeeccccccCCCCcceeeccCCCC--CCcccceeeeeeec
Q psy15955 190 FDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPA--KDKCGELLTSLCYH 241 (475)
Q Consensus 190 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~--~~~~G~l~l~l~~~ 241 (475)
||+|..+++++||++.++|.++..+ ...|++|.+.. +...|+|++++.|.
T Consensus 80 ~d~d~~~~~~~lG~~~i~l~~l~~~--~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 80 FDEDGDKPPDFLGKVAIPLLSIRDG--QPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEETTEEEEECCBCEEEGGGCCSS--CCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EECCCCCCCCeeEEEEEEHHHccCC--CceEEEeecCCCCCccceEEEEEEEEE
Confidence 9999998899999999999999654 35899998654 35789999999875
No 44
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1e-20 Score=161.54 Aligned_cols=123 Identities=35% Similarity=0.611 Sum_probs=104.1
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEee-cc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNV-PW 307 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v-~~ 307 (475)
+..|+|.+++.|.+..+.|.|.|++|++|+..+..+.+||||++++.+++. .+++|++++++.||+|||+|.|.+ +.
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~~~~~ 87 (141)
T 2d8k_A 10 ENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK--HKLETKVKRKNLNPHWNETFLFEGFPY 87 (141)
T ss_dssp CCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS--SEEECCCCTTCSSCCCCEEEEECSCCH
T ss_pred ceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC--ccEeCceEcCCCCCccccEEEECccCH
Confidence 467999999999999999999999999999999999999999999875443 357999999999999999999984 55
Q ss_pred cccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCccccccccc
Q psy15955 308 EKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDM 353 (475)
Q Consensus 308 ~~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~ 353 (475)
+++....|.|+|||++.++++++||++.|++.+...+....+|.++
T Consensus 88 ~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 133 (141)
T 2d8k_A 88 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDL 133 (141)
T ss_dssp HHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECC
T ss_pred HHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEEC
Confidence 5555678999999999999999999999998766544333444443
No 45
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=4.1e-21 Score=164.02 Aligned_cols=115 Identities=25% Similarity=0.468 Sum_probs=102.2
Q ss_pred CCCcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEe-e
Q psy15955 227 AKDKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFN-V 305 (475)
Q Consensus 227 ~~~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~-v 305 (475)
.+...|+|.+++.|.+..+.|.|.|++|++|+..+..+.+||||++++.+++....+++|++++++.||+|||+|.|. +
T Consensus 3 ~~~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~ 82 (141)
T 1v27_A 3 SGSSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPV 82 (141)
T ss_dssp CCCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSC
T ss_pred CCCcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccC
Confidence 356789999999999999999999999999999999999999999998665444567899999999999999999999 5
Q ss_pred cccccccceEEEEEEeccCCCC--CeeeEEEEEcCcCC
Q psy15955 306 PWEKIRECSLNVMVMDFDNIGR--NELIGRILLAGKNG 341 (475)
Q Consensus 306 ~~~~l~~~~l~i~V~d~~~~~~--d~~lG~~~i~l~~~ 341 (475)
+.+++....|.|+|||++.+++ +++||++.|++.+.
T Consensus 83 ~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l 120 (141)
T 1v27_A 83 HRREFRERMLEITLWDQARVREEESEFLGEILIELETA 120 (141)
T ss_dssp CTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGC
T ss_pred CHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEcccc
Confidence 6666767789999999999887 99999999988654
No 46
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.84 E-value=1.7e-20 Score=159.48 Aligned_cols=115 Identities=30% Similarity=0.557 Sum_probs=102.6
Q ss_pred CCcccceeeeeeecCCceeEEEEEEeeccCcccccC-CCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEe-e
Q psy15955 228 KDKCGELLTSLCYHPSNSVLTITLLKARNLKAKDIN-GKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFN-V 305 (475)
Q Consensus 228 ~~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~-~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~-v 305 (475)
....|+|.+++.|.+..+.|.|.|++|++|+..+.. +.+||||++++.+++. .+++|++++++.||+|||+|.|. +
T Consensus 5 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~~v 82 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKK--HKVKTRVLRKTLDPAFDETFTFYGI 82 (138)
T ss_dssp CCCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTC--SEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CCccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCC--ceEecCcCcCCCCCcEeeEEEEcCc
Confidence 346799999999999999999999999999999985 8999999999876443 56899999999999999999995 8
Q ss_pred cccccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCC
Q psy15955 306 PWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGA 344 (475)
Q Consensus 306 ~~~~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~ 344 (475)
+.+++....|.|+|||++.++++++||++.|++.+....
T Consensus 83 ~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 83 PYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp CSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCT
T ss_pred CHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCC
Confidence 877777778999999999999999999999999776544
No 47
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=9.4e-21 Score=164.15 Aligned_cols=125 Identities=34% Similarity=0.543 Sum_probs=99.8
Q ss_pred CCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCC---ceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEE
Q psy15955 114 DNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK---HRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVF 190 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~---~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~ 190 (475)
..+.|.|+|++|++|+..+..+.+||||+|++.+... ..++|+++++++||+|||+|.|. +.. ....|+|+||
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~---~~~~l~~~V~ 93 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFR-VHP---QQHRLLFEVF 93 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEE-ECT---TTCEEEEEEE
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEE-ecC---CCCEEEEEEE
Confidence 4557999999999999999889999999999974432 56799999999999999999998 332 2468999999
Q ss_pred eeCCCCCCccccceeeccccccCCCCc------ceeeccCCCC--CCcccceeeeeeecC
Q psy15955 191 DYDRFSRDDSIGEVFLPLCQVDLSEKP------TFWKALKPPA--KDKCGELLTSLCYHP 242 (475)
Q Consensus 191 d~d~~~~~~~iG~~~i~l~~l~~~~~~------~~~~~L~~~~--~~~~G~l~l~l~~~~ 242 (475)
|+|..+++++||++.++|.++..+... ..|++|.+.. ....|+|++++.|.|
T Consensus 94 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 94 DENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred ECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 999999999999999999999766543 4899997653 356899999999976
No 48
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.84 E-value=9.6e-21 Score=164.02 Aligned_cols=130 Identities=28% Similarity=0.388 Sum_probs=107.9
Q ss_pred CCcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecc
Q psy15955 228 KDKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPW 307 (475)
Q Consensus 228 ~~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~ 307 (475)
....|++.+++.|.+..+.|.|+|++|++|+..+ .+.+||||++++.++.....+++|++++++.||.|||+|.|.++.
T Consensus 10 ~~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 88 (153)
T 3fbk_A 10 HKVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQE 88 (153)
T ss_dssp ---CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCG
T ss_pred cCCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEeccc
Confidence 4578999999999999999999999999999998 689999999999876655567899999999999999999999977
Q ss_pred cccccceEEEEEEeccCCCC-CeeeEEEEEcCcCCCCCcccccccccccCCCcceeeeeccCCCCc
Q psy15955 308 EKIRECSLNVMVMDFDNIGR-NELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKPDHE 372 (475)
Q Consensus 308 ~~l~~~~l~i~V~d~~~~~~-d~~lG~~~i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~s~~ 372 (475)
.++.. .|.|+|||++.+++ +++||++.|++.++. .++.....|++|.+...
T Consensus 89 ~~~~~-~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~-------------~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 89 EDDQK-RLLVTVWNRASQSRQSGLIGCMSFGVKSLL-------------TPDKEISGWYYLLGEHL 140 (153)
T ss_dssp GGTTS-EEEEEEEECCSSGGGCEEEEEEEEEHHHHT-------------C--CCEEEEEECBCTTG
T ss_pred HHhCC-EEEEEEEeCCCCCCCCcEEEEEEEEHHHhc-------------CCCCccccEEECCChhh
Confidence 67654 59999999999877 999999999774322 23456778888876543
No 49
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=4.9e-21 Score=160.22 Aligned_cols=121 Identities=24% Similarity=0.336 Sum_probs=101.7
Q ss_pred CCEEEEEEEEeecCCCC---CCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEEe
Q psy15955 115 NSTLILRVISAKELPAK---DMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFD 191 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~---~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d 191 (475)
.+.|.|+|++|++|+.+ +..|.+||||++++.+.+..+++|+++++++||+|||+|.|. +. ......|.|+|||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~--~~~~~~l~i~V~d 78 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFI-LD--PNQENVLEITLMD 78 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEE-EC--TTSCCEEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEE-ec--CCCCCEEEEEEEE
Confidence 45799999999999984 667899999999997554578899999999999999999998 32 2345789999999
Q ss_pred eCCCCCCccccceeeccccccCCCCcceeeccCCCCCCcccceeeeeeecC
Q psy15955 192 YDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDKCGELLTSLCYHP 242 (475)
Q Consensus 192 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~G~l~l~l~~~~ 242 (475)
+|..+ +++||++.++|.++..+.....|++|.+ ...|.|+++++..|
T Consensus 79 ~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~---~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 79 ANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ---VTEMVLEMSLEVAS 125 (126)
T ss_dssp CCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEETT---TEEEEEEEEEECCC
T ss_pred CCCCC-CceeEEEEEEHHHccCCCcEEEEEEcCC---CceEEEEEEEEeCC
Confidence 99874 8999999999999988887889999975 35677777776544
No 50
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.84 E-value=1.3e-20 Score=159.36 Aligned_cols=111 Identities=27% Similarity=0.393 Sum_probs=95.4
Q ss_pred cceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEe-eccccc
Q psy15955 232 GELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFN-VPWEKI 310 (475)
Q Consensus 232 G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~-v~~~~l 310 (475)
|.+.+.+.|....+.|.|.|++|++|+. +..+.+||||++++.+++....+++|++++++.||+|||+|.|. ++.+++
T Consensus 7 ~~~~~~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l 85 (134)
T 2b3r_A 7 GSGAVKLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETL 85 (134)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHH
T ss_pred ccEEEEEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHh
Confidence 4455566666677899999999999997 77889999999999876555567899999999999999999999 887777
Q ss_pred ccceEEEEEEeccCCCCCeeeEEEEEcCcCCCC
Q psy15955 311 RECSLNVMVMDFDNIGRNELIGRILLAGKNGSG 343 (475)
Q Consensus 311 ~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~ 343 (475)
....|.|+|||++.++++++||++.|++.+...
T Consensus 86 ~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~ 118 (134)
T 2b3r_A 86 RQRELQLSVLSAESLRENFFLGGITLPLKDFNL 118 (134)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCT
T ss_pred CcCEEEEEEEECCCCCCCcEEEEEEEEhhhccC
Confidence 777899999999999999999999998865543
No 51
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.83 E-value=1.8e-20 Score=160.14 Aligned_cols=116 Identities=34% Similarity=0.527 Sum_probs=102.7
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEe-ecc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFN-VPW 307 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~-v~~ 307 (475)
...|+|.+++.|.+..+.|.|.|++|++|+..+..+.+||||++++.+++....+++|++++++.||.|||+|.|. ++.
T Consensus 13 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 92 (142)
T 2chd_A 13 TTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITE 92 (142)
T ss_dssp -CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCH
T ss_pred CccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCH
Confidence 4679999999999999999999999999999999999999999999765544567899999999999999999998 776
Q ss_pred cccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCC
Q psy15955 308 EKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGA 344 (475)
Q Consensus 308 ~~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~ 344 (475)
.++....|.|+|||++.++++++||++.|++.+...+
T Consensus 93 ~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~ 129 (142)
T 2chd_A 93 EDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKAN 129 (142)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTT
T ss_pred HHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCC
Confidence 6665568999999999999999999999998766544
No 52
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.83 E-value=3.7e-21 Score=163.22 Aligned_cols=122 Identities=28% Similarity=0.456 Sum_probs=104.9
Q ss_pred CCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeec-CCCCceeeeeEEeecccccccccceEEEEEEeeC
Q psy15955 115 NSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKR-RTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYD 193 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~-~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d 193 (475)
.+.|.|+|++|++|+..+..+.+||||+|++. .+.++|++++ +++||+|||+|.|. +. . ....|+|+|||+|
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~~~~nP~Wne~f~f~-v~--~-~~~~l~~~V~d~~ 81 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCR---TQDQKSNVAEGMGTTPEWNETFIFT-VS--E-GTTELKAKIFDKD 81 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSSCSSCCCEEEESS---SCEEECCCCTTCCSSCEEEEEEEEE-EE--S-SCCEEEEEECCSS
T ss_pred cEEEEEEEEeccCCCCcccCCCcCceEEEEEC---CccceeEeccCCCCCCccCcEEEEE-EC--C-CCCEEEEEEEECC
Confidence 45799999999999999999999999999984 3467999998 89999999999998 33 3 4568999999999
Q ss_pred CCCCCccccceeeccccc-cCCCCcceeeccCCCCCCcccceeeeeeecCCc
Q psy15955 194 RFSRDDSIGEVFLPLCQV-DLSEKPTFWKALKPPAKDKCGELLTSLCYHPSN 244 (475)
Q Consensus 194 ~~~~~~~iG~~~i~l~~l-~~~~~~~~~~~L~~~~~~~~G~l~l~l~~~~~~ 244 (475)
.++++++||++.++|.++ ..+.....|++|. ..+...|+|++++.|.|..
T Consensus 82 ~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 82 VGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp SCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTEEEEEEEEEEEEEECC
T ss_pred CCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCccCEEEEEEEEEEeCC
Confidence 999999999999999999 4444457899998 4567889999999998753
No 53
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.83 E-value=8.5e-21 Score=163.50 Aligned_cols=115 Identities=22% Similarity=0.305 Sum_probs=97.4
Q ss_pred CCEEEEEEEEeecCCCCCC----------CCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccce
Q psy15955 115 NSTLILRVISAKELPAKDM----------SGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRV 184 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~----------~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~ 184 (475)
.+.|.|+|++|++|+++|. .+.+||||+|.+. +.+..||+++++++||+|||+|.|. +. . ...
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~--~~~~~kT~v~~ktlnP~WNE~F~f~-v~--~--~~~ 100 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD--QVRVGQTSTKQKTNKPTYNEEFCAN-VT--D--GGH 100 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEE-EE--E--ECE
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC--CEeeEEeeecCCCCCCccCcEEEEE-cC--C--CCE
Confidence 4579999999999999883 3679999999993 3345799999999999999999998 32 2 358
Q ss_pred EEEEEEeeCCCCCCccccceeeccccccCC----CCcceeeccCCCCCCcccceeeeeeec
Q psy15955 185 LHLHVFDYDRFSRDDSIGEVFLPLCQVDLS----EKPTFWKALKPPAKDKCGELLTSLCYH 241 (475)
Q Consensus 185 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~----~~~~~~~~L~~~~~~~~G~l~l~l~~~ 241 (475)
|.|+|||+|.+++|++||.+.|+|+++..+ .....|++|.+ .|+|++.+++.
T Consensus 101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-----~G~i~l~l~~~ 156 (157)
T 2fk9_A 101 LELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-----EGKVFVVITLT 156 (157)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-----SCEEEEEEEEC
T ss_pred EEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-----CcEEEEEEEEE
Confidence 999999999999999999999999998754 45679999964 69999998874
No 54
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.83 E-value=2.7e-20 Score=165.13 Aligned_cols=126 Identities=33% Similarity=0.532 Sum_probs=98.6
Q ss_pred CCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCC---ceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEE
Q psy15955 114 DNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK---HRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVF 190 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~---~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~ 190 (475)
..+.|.|+|++|++|+..+..+.+||||+|++.+... .+++|+++++++||+|||+|.|. +.. ....|.|+||
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~-v~~---~~~~L~~~V~ 81 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFR-VLP---QRHRILFEVF 81 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEE-ECT---TTCEEEEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEE-EcC---CCCEEEEEEE
Confidence 4668999999999999999999999999999975332 46799999999999999999998 332 2368999999
Q ss_pred eeCCCCCCccccceeeccccccCCCCc------ceeeccCCCC--CCcccceeeeeeecCC
Q psy15955 191 DYDRFSRDDSIGEVFLPLCQVDLSEKP------TFWKALKPPA--KDKCGELLTSLCYHPS 243 (475)
Q Consensus 191 d~d~~~~~~~iG~~~i~l~~l~~~~~~------~~~~~L~~~~--~~~~G~l~l~l~~~~~ 243 (475)
|+|.++++++||++.++|.++..+... ..|++|.+.. +...|+|.+++.|.|.
T Consensus 82 d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred ECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 999999999999999999999766543 1799998643 3467999999999986
No 55
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=3.5e-20 Score=159.42 Aligned_cols=113 Identities=27% Similarity=0.445 Sum_probs=99.0
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCccc-cc------CCCccceEEEEEEeCceeeeeeecccccCCCCCeecceE
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAK-DI------NGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESF 301 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~-~~------~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f 301 (475)
...|+|.+++.|.+..+.|.|.|++|++|+.. +. .+.+||||++++.+++. .+++|++++++.||+|||+|
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f 87 (147)
T 2enp_A 10 YQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK--NSKQTGVKRKTQKPVFEERY 87 (147)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS--SCEECCCCCSCSSCCCCBCC
T ss_pred CcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC--cceEeecccCCCCCeEeeeE
Confidence 46899999999999999999999999999984 33 35899999999976443 36799999999999999999
Q ss_pred EEeecccccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCC
Q psy15955 302 SFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSG 343 (475)
Q Consensus 302 ~f~v~~~~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~ 343 (475)
.|.++..++....|.|+|||++.++++++||++.|++.+...
T Consensus 88 ~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~ 129 (147)
T 2enp_A 88 TFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDL 129 (147)
T ss_dssp EECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCT
T ss_pred EEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCC
Confidence 999987776667899999999999999999999999876544
No 56
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=6.8e-20 Score=157.78 Aligned_cols=118 Identities=29% Similarity=0.479 Sum_probs=101.4
Q ss_pred CCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEEeeCC
Q psy15955 115 NSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDR 194 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d~ 194 (475)
.+.|.|+|++|++|+..+..+.+||||++++ +.+.++|+++++++||+|||+|.|. +. .. ...|.|+|||+|.
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~---~~~~~kT~~~~~t~nP~Wne~f~f~-v~--~~-~~~l~~~v~d~d~ 88 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQV---GKTKKRTKTIYGNLNPVWEENFHFE-CH--NS-SDRIKVRVLDEDD 88 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE---TTEEEECCCCCSCSSCEEEEEEEEE-EC--ST-TCEEEEEEEECCC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEE---CCEEEECCccCCCCCCCcccEEEEE-ec--CC-CCEEEEEEEECCC
Confidence 5679999999999999999999999999999 4567899999999999999999998 32 22 3689999999998
Q ss_pred C-----------CCCccccceeeccccccCCCCcceeeccCCCCC--Ccccceeeeeeec
Q psy15955 195 F-----------SRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAK--DKCGELLTSLCYH 241 (475)
Q Consensus 195 ~-----------~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~--~~~G~l~l~l~~~ 241 (475)
. +++++||++.++|.++ ......|++|.+... ...|+|+++++|.
T Consensus 89 ~~~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 89 DIKSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp SHHHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred CccccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 5 7899999999999999 345579999986443 4679999999885
No 57
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.82 E-value=1.3e-19 Score=159.83 Aligned_cols=126 Identities=24% Similarity=0.407 Sum_probs=103.0
Q ss_pred CCCcccceeeeeeecCCceeEEEEEEeeccCccccc-CCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEee
Q psy15955 227 AKDKCGELLTSLCYHPSNSVLTITLLKARNLKAKDI-NGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNV 305 (475)
Q Consensus 227 ~~~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~-~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v 305 (475)
.....|+|.+++.| ..+.|.|.|++|++|+.++. .+.+||||++++.+++....+++|++++++.||+|||+|.|.+
T Consensus 14 ~~~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v 91 (171)
T 2q3x_A 14 ATPAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDE 91 (171)
T ss_dssp ---CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSS
T ss_pred CCCCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEe
Confidence 34567999999999 57899999999999999985 7899999999998776666788999999999999999999998
Q ss_pred cccccccceEEEEEE-eccCCCCCeeeEEEEEcCcCCCCCcccccccccccCCCcceeeeeccCCCC
Q psy15955 306 PWEKIRECSLNVMVM-DFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKPDH 371 (475)
Q Consensus 306 ~~~~l~~~~l~i~V~-d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~s~ 371 (475)
... ...|.|+|| |++.++++++||++.|++.+...+ .....|++|....
T Consensus 92 ~~~---~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~--------------~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 92 SPQ---GKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLS--------------SMVIGWYKLFPPS 141 (171)
T ss_dssp CCT---TEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTT--------------SCEEEEEECBCGG
T ss_pred cCC---CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccC--------------CCcceeEECCCcc
Confidence 643 468999999 999999999999999988654432 2345666666544
No 58
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.82 E-value=1.6e-20 Score=159.22 Aligned_cols=117 Identities=21% Similarity=0.323 Sum_probs=98.2
Q ss_pred CCEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccc
Q psy15955 115 NSTLILRVISAKELPAKDMSGT-----------SDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSR 183 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~~~~-----------~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~ 183 (475)
.+.|.|+|++|++|++.|..+. +||||+|++ ++....+|+++.+++||+|||+|.|. +. .. .
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l--~~~~~~~T~~~~~t~nP~WnE~f~f~-v~--~~--~ 77 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNV--DDSRIGQTATKQKTNSPAWHDEFVTD-VC--NG--R 77 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEE--TTEEEEECCCCSSCSSCEEEEEEEEE-EE--EE--C
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEE--CCeEeeeeeEECCCcCCccCCEEEEE-ec--CC--C
Confidence 4579999999999998885444 999999998 33445799999999999999999998 33 22 6
Q ss_pred eEEEEEEeeCCCCCCccccceeeccccccCCCC--cceeeccCCCCCCcccceeeeeeecCC
Q psy15955 184 VLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEK--PTFWKALKPPAKDKCGELLTSLCYHPS 243 (475)
Q Consensus 184 ~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~--~~~~~~L~~~~~~~~G~l~l~l~~~~~ 243 (475)
.|.|+|||+|..++|++||++.++|.++..+.. ...|++|.+ .|+|++.++|.+.
T Consensus 78 ~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-----~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 78 KIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-----EGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-----SCEEEEEEEEEEE
T ss_pred EEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-----CeEEEEEEEEEec
Confidence 899999999999999999999999999976543 378999864 6999999998654
No 59
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.82 E-value=1.9e-20 Score=160.07 Aligned_cols=112 Identities=34% Similarity=0.565 Sum_probs=97.5
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCcee---------eeeeecccccCCCCCeecc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKR---------IEKRKTQIFKCNLNPVFNE 299 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~---------~~~~~T~~~~~t~nP~w~e 299 (475)
...|+|.+++.|. .+.|.|.|++|++|+..+..|.+||||++++...... ..+++|++++++.||.|||
T Consensus 4 ~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 4 PITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred CcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 4579999999998 6799999999999999999999999999998654321 2357999999999999999
Q ss_pred eEEEe-ecccccccceEEEEEEeccCCCCCeeeEEEEEcCcCCC
Q psy15955 300 SFSFN-VPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGS 342 (475)
Q Consensus 300 ~f~f~-v~~~~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~ 342 (475)
+|.|. ++.+++....|.|+|||++.++++++||++.|++.+..
T Consensus 82 ~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~ 125 (142)
T 1rh8_A 82 TVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTS 125 (142)
T ss_dssp EEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCG
T ss_pred EEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccc
Confidence 99997 77766667789999999999999999999999886544
No 60
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.82 E-value=4.6e-20 Score=156.63 Aligned_cols=110 Identities=33% Similarity=0.478 Sum_probs=96.9
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWE 308 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~ 308 (475)
+..|+|.+++.| ..+.|.|.|++|++|+..+..+.+||||++++.+++....+++|++++++.||.|||+|.|.+...
T Consensus 2 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 79 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPS 79 (137)
T ss_dssp CCCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CcceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCch
Confidence 357999999999 579999999999999999999999999999997665455678999999999999999999998765
Q ss_pred ccccceEEEEEEeccCCCCCeeeEEEEEcCcCC
Q psy15955 309 KIRECSLNVMVMDFDNIGRNELIGRILLAGKNG 341 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~ 341 (475)
++ ...|.|+|||++..+++++||++.+++.+.
T Consensus 80 ~~-~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l 111 (137)
T 3rdl_A 80 DK-DRRLSVEIWDWDRTTRNDFMGSLSFGVSEL 111 (137)
T ss_dssp GG-GCEEEEEEEECCSSSCCEEEEEEEEEHHHH
T ss_pred hc-CCEEEEEEEECCCCCCCceEEEEEEeHHHh
Confidence 54 347999999999999999999999977443
No 61
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.80 E-value=1.6e-19 Score=152.30 Aligned_cols=120 Identities=22% Similarity=0.289 Sum_probs=98.2
Q ss_pred CCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEEeeCC
Q psy15955 115 NSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDR 194 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d~ 194 (475)
...|.|+|++|++|++.|..|.+||||+|++.+. .+.++|+++++++||+|||+|.|. + ... ..|.|+|||+|.
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~~~~kT~v~~~t~nP~wne~f~f~-v--~~~--~~l~~~v~d~d~ 77 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-GQCHSTDTVKNTLDPKWNQHYDLY-V--GKT--DSITISVWNHKK 77 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-CCEEECCCCSSCSSCEEEEEEEEE-E--ETT--CCEEEEEEEGGG
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-CceEECCccCCCCCCCccCEEEEE-e--CCC--CEEEEEEEECCC
Confidence 3479999999999999999999999999999543 467899999999999999999998 3 232 359999999998
Q ss_pred CCC---Cccccceeeccccc-cCCCCcceeeccCCCCC----Ccccceeeeeee
Q psy15955 195 FSR---DDSIGEVFLPLCQV-DLSEKPTFWKALKPPAK----DKCGELLTSLCY 240 (475)
Q Consensus 195 ~~~---~~~iG~~~i~l~~l-~~~~~~~~~~~L~~~~~----~~~G~l~l~l~~ 240 (475)
.++ +++||++.+++.++ ........|++|..... ...|+|.+++++
T Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 78 IHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 876 79999999999988 44444468888876422 357999988764
No 62
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=2.2e-19 Score=154.74 Aligned_cols=110 Identities=33% Similarity=0.504 Sum_probs=96.2
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWE 308 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~ 308 (475)
...|+|.+++.|. .+.|.|+|++|++|+..+..+.+||||++++..++....+++|++++++.||.|||+|.|.+...
T Consensus 17 ~~~G~l~~~l~~~--~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 94 (149)
T 1a25_A 17 ERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKES 94 (149)
T ss_dssp CTTCEEEEEEEES--SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSG
T ss_pred CcceEEEEEEEec--CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccc
Confidence 4579999999995 57899999999999999999999999999997655445678999999999999999999999765
Q ss_pred ccccceEEEEEEeccCCCCCeeeEEEEEcCcCC
Q psy15955 309 KIRECSLNVMVMDFDNIGRNELIGRILLAGKNG 341 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~ 341 (475)
++ ...|.|+|||++.++++++||++.|++.+.
T Consensus 95 ~~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 126 (149)
T 1a25_A 95 DK-DRRLSVEIWDWDLTSRNDFMGSLSFGISEL 126 (149)
T ss_dssp GG-GCEEEEEEEECCSSSCCEEEEEEEEEHHHH
T ss_pred cC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHh
Confidence 54 357999999999999999999999987543
No 63
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=5.1e-19 Score=155.80 Aligned_cols=121 Identities=23% Similarity=0.231 Sum_probs=97.4
Q ss_pred CCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEEeeC
Q psy15955 114 DNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYD 193 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d 193 (475)
..+.|.|+|++|++|+..+..+.+||||+|++. .+++||+++++++||+|||+|.|. + .. ...|.|+|||+|
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~---~~~~kT~v~~~tlnP~Wne~f~f~-v--~~--~~~L~~~V~D~d 105 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVD---GQSKKTEKCNNTNSPKWKQPLTVI-V--TP--VSKLHFRVWSHQ 105 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEE-E--CT--TCEEEEEEEECC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEEC---CEEeEccccCCCCCCeECCEEEEE-e--CC--CCEEEEEEEECC
Confidence 345799999999999944434459999999994 378899999999999999999998 3 22 578999999999
Q ss_pred CCCCCccccceeeccccccCCCC-----cceeeccCCCC--CCcccceeeeeeecC
Q psy15955 194 RFSRDDSIGEVFLPLCQVDLSEK-----PTFWKALKPPA--KDKCGELLTSLCYHP 242 (475)
Q Consensus 194 ~~~~~~~iG~~~i~l~~l~~~~~-----~~~~~~L~~~~--~~~~G~l~l~l~~~~ 242 (475)
.++++++||++.++|.++..+.. ...|++|.... ....|+|.+.++|.+
T Consensus 106 ~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 106 TLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp SSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred CCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeee
Confidence 99999999999999999864322 25699997652 246799999998763
No 64
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=5.4e-17 Score=138.12 Aligned_cols=104 Identities=34% Similarity=0.512 Sum_probs=87.5
Q ss_pred CceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccccc-ccceEEEEEEe
Q psy15955 243 SNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKI-RECSLNVMVMD 321 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l-~~~~l~i~V~d 321 (475)
..+.|.|+|++|++|+..+. +.+||||++++. + .+++|++++++.||+|||+|.|.+...++ ....|.|+|||
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~--~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d 78 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK--D---EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKD 78 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS--S---CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEE
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC--C---EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEE
Confidence 45789999999999999998 999999999874 2 35799999999999999999999875443 34689999999
Q ss_pred ccCCCCCeeeEEEEEcCcCCCCCcccccccc
Q psy15955 322 FDNIGRNELIGRILLAGKNGSGASETKHWQD 352 (475)
Q Consensus 322 ~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~ 352 (475)
++.++++++||++.|++.++..+.....|.+
T Consensus 79 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~ 109 (140)
T 2dmh_A 79 FETIGQNKLIGTATVALKDLTGDQSRSLPYK 109 (140)
T ss_dssp TTCSSSCCCCEEEEEEGGGTCSSSCEEEEEE
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCceeEEe
Confidence 9999999999999999877665555555655
No 65
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=5.5e-17 Score=136.76 Aligned_cols=98 Identities=29% Similarity=0.377 Sum_probs=85.8
Q ss_pred eeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEE
Q psy15955 237 SLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLN 316 (475)
Q Consensus 237 ~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~ 316 (475)
++.|.+..+.|.|+|++|++|+..+..|.+||||++++. + .+++|++++++.||.|||+|.|.+... ...|.
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~--~---~~~kT~~~~~t~nP~wne~f~f~~~~~---~~~l~ 76 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELG--N---DRLQTHTVYKNLNPEWNKVFTFPIKDI---HDVLE 76 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET--T---EEEECCCCSSCSSCCCCEEEEEEESCT---TCEEE
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC--C---EEEEeeeecCCCCCccccEEEEEecCC---CCEEE
Confidence 456788899999999999999999999999999999873 2 256899999999999999999998732 35799
Q ss_pred EEEEeccCCCCCeeeEEEEEcCcCCC
Q psy15955 317 VMVMDFDNIGRNELIGRILLAGKNGS 342 (475)
Q Consensus 317 i~V~d~~~~~~d~~lG~~~i~l~~~~ 342 (475)
|+|||++..+++++||++.+++.+..
T Consensus 77 i~V~d~d~~~~~~~lG~~~i~l~~l~ 102 (133)
T 2ep6_A 77 VTVFDEDGDKPPDFLGKVAIPLLSIR 102 (133)
T ss_dssp EEEEEEETTEEEEECCBCEEEGGGCC
T ss_pred EEEEECCCCCCCCeeEEEEEEHHHcc
Confidence 99999999989999999999886654
No 66
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.70 E-value=2.5e-17 Score=135.93 Aligned_cols=121 Identities=17% Similarity=0.272 Sum_probs=104.2
Q ss_pred CEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeec-CCCCceeeeeEEeecccccccccceEEEEEEeeCC
Q psy15955 116 STLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKR-RTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDR 194 (475)
Q Consensus 116 ~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~-~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d~ 194 (475)
--|.|.|.+|.+|+ +++|||+++.+ .+.++||++++ ++.||+|||.|.|. +.-.......|.|.|+|+++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~F---Rg~k~kTkvi~~~~~npvfnE~F~wp-l~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTF---RGQSFYSRVLENCEDVADFDETFRWP-VASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEE---TTEEEECCCEEEECSCEEEEEEEEEE-ESSCCCTTCEEEEEEEEECT
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEE---eccceeeEEeccCCCCceEcceEEec-CCCCCCCCCEEEEEEEECcc
Confidence 35999999999999 57999999999 56789999998 69999999999998 55555567899999999999
Q ss_pred CCCCccccceeeccccccCCCCcceeeccCCCCCC-cccceeeeeeecCCce
Q psy15955 195 FSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKD-KCGELLTSLCYHPSNS 245 (475)
Q Consensus 195 ~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~-~~G~l~l~l~~~~~~~ 245 (475)
++++.+||++.++|.++...+....+..|.+.+.. ..++|.+.++|.|..+
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAADG 143 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEETTC
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCCCC
Confidence 99999999999999999877766677777766554 3489999999998754
No 67
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.69 E-value=6.9e-17 Score=139.03 Aligned_cols=108 Identities=21% Similarity=0.318 Sum_probs=86.5
Q ss_pred CCceeEEEEEEeeccCcccccC----------CCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccc
Q psy15955 242 PSNSVLTITLLKARNLKAKDIN----------GKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIR 311 (475)
Q Consensus 242 ~~~~~L~v~v~~a~~L~~~~~~----------~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~ 311 (475)
...+.|.|+|++|++|+++|.. +.+||||++++ ++. .+.+|+++++++||.|||+|.|.+..
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l--~~~--~~~kT~v~~ktlnP~WNE~F~f~v~~---- 97 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSV--DQV--RVGQTSTKQKTNKPTYNEEFCANVTD---- 97 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEE--TTE--EEEECCCCSSCSSCEEEEEEEEEEEE----
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEE--CCE--eeEEeeecCCCCCCccCcEEEEEcCC----
Confidence 4568999999999999988832 67999999987 232 34689999999999999999999863
Q ss_pred cceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCcccccccccccC--CCcceeeeeccCC
Q psy15955 312 ECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITK--PRQTIVQWHRLKP 369 (475)
Q Consensus 312 ~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~--p~~~~s~w~~L~~ 369 (475)
...|.|+|||++.+++|++||++.|++.+ +... ++.....|++|.+
T Consensus 98 ~~~L~~~V~D~d~~~~dd~iG~~~i~l~~------------l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 98 GGHLELAVFHETPLGYDHFVANCTLQFQE------------LLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp ECEEEEEEEECCSSSSCEEEEEEEEEHHH------------HHHHHTTCSEEEEEEECBS
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEEEHHH------------hhcccCCCCcccEEEECCC
Confidence 24799999999999999999999997633 2222 3456678888865
No 68
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.68 E-value=4.8e-16 Score=134.33 Aligned_cols=99 Identities=26% Similarity=0.364 Sum_probs=79.0
Q ss_pred CCceeEEEEEEeeccCcccccCCCccceEEEEEEeCc-eeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEE
Q psy15955 242 PSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGE-KRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVM 320 (475)
Q Consensus 242 ~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~-~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~ 320 (475)
+..+.|.|+|++|++|+..+..+.+||||++++.... ....+++|++++++.||.|||+|.|.+... ...|.|+||
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~~l~~~V~ 93 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ---QHRLLFEVF 93 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT---TCEEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC---CCEEEEEEE
Confidence 4578999999999999999989999999999987432 234678999999999999999999998753 357999999
Q ss_pred eccCCCCCeeeEEEEEcCcCCCC
Q psy15955 321 DFDNIGRNELIGRILLAGKNGSG 343 (475)
Q Consensus 321 d~~~~~~d~~lG~~~i~l~~~~~ 343 (475)
|++.++++++||++.|++.+...
T Consensus 94 d~d~~~~d~~iG~~~i~l~~l~~ 116 (153)
T 3b7y_A 94 DENRLTRDDFLGQVDVPLYPLPT 116 (153)
T ss_dssp ECCSSSCCEEEEEEEEECCSCCB
T ss_pred ECCCCcCCCeeEEEEEEHHHccc
Confidence 99999999999999999876543
No 69
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.67 E-value=1.4e-16 Score=132.95 Aligned_cols=104 Identities=22% Similarity=0.383 Sum_probs=82.8
Q ss_pred ceeEEEEEEeeccCcc---cccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEE
Q psy15955 244 NSVLTITLLKARNLKA---KDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVM 320 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~---~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~ 320 (475)
.+.|.|+|++|++|+. .+..|.+||||++++.+.. ..+++|++++++.||.|||+|.|.+...+ ...|.|+||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~l~i~V~ 77 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQ--ENVLEITLM 77 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTS--CCEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEEecCCC--CCEEEEEEE
Confidence 4789999999999998 4667899999999875432 25679999999999999999999985433 457999999
Q ss_pred eccCCCCCeeeEEEEEcCcCCCCCcccccccc
Q psy15955 321 DFDNIGRNELIGRILLAGKNGSGASETKHWQD 352 (475)
Q Consensus 321 d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~ 352 (475)
|++..+ +++||++.+++.+...+.....|..
T Consensus 78 d~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~ 108 (126)
T 1rlw_A 78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFI 108 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEE
T ss_pred ECCCCC-CceeEEEEEEHHHccCCCcEEEEEE
Confidence 999874 8999999998866544333333433
No 70
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.67 E-value=2.3e-16 Score=133.49 Aligned_cols=106 Identities=18% Similarity=0.316 Sum_probs=84.7
Q ss_pred ceeEEEEEEeeccCcccccCCC-----------ccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccccccc
Q psy15955 244 NSVLTITLLKARNLKAKDINGK-----------SDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRE 312 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~~~~~~~-----------~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~ 312 (475)
.+.|.|+|++|++|++.+..++ +||||++++ ++. ...+|++++++.||.|||+|.|.+...
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l--~~~--~~~~T~~~~~t~nP~WnE~f~f~v~~~---- 76 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNV--DDS--RIGQTATKQKTNSPAWHDEFVTDVCNG---- 76 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEE--TTE--EEEECCCCSSCSSCEEEEEEEEEEEEE----
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEE--CCe--EeeeeeEECCCcCCccCCEEEEEecCC----
Confidence 5789999999999999886544 999999987 332 346899999999999999999998643
Q ss_pred ceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCcccccccccccCCCcceeeeeccCC
Q psy15955 313 CSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKP 369 (475)
Q Consensus 313 ~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~ 369 (475)
..|.|+|||++.+++|++||++.|++.+. ...+......|+.|.+
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l------------~~~~~~~~~~w~~L~~ 121 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEEL------------LQNGSRHFEDWIDLEP 121 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHH------------TSTTCSEEEEEEECBS
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHh------------cccCCCCccEEEEcCC
Confidence 57999999999999999999999977433 2223334567777765
No 71
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.67 E-value=1.3e-16 Score=133.74 Aligned_cols=88 Identities=25% Similarity=0.402 Sum_probs=71.0
Q ss_pred CCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeee-cCCCCceeeeeEEeecccccccccceEEEEEEeeC
Q psy15955 115 NSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIK-RRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYD 193 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~-~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d 193 (475)
.+.|.|+|++|++|+. .|.+||||+|.. +..+|+++ .+++||+|||+|.|. ++ .. ...|.|+|||+|
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~~-----~~~kt~~~~~~t~nP~WnE~f~f~-v~--~~-~~~L~~~V~D~d 71 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLKV-----QNVKSTTIAVRGSQPSWEQDFMFE-IN--RL-DLGLTVEVWNKG 71 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEEE-----TTEEEECCCEESSSCEEEEEEEEE-EC--CC-SSEEEEEEEECC
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEEe-----cCEEEeEecCCCCCceECCEEEEE-Ee--CC-CCeEEEEEEECC
Confidence 3579999999998853 678999999992 23456554 479999999999998 33 32 357999999999
Q ss_pred CCCCCccccceeeccccccCCC
Q psy15955 194 RFSRDDSIGEVFLPLCQVDLSE 215 (475)
Q Consensus 194 ~~~~~~~iG~~~i~l~~l~~~~ 215 (475)
.++|++||++.++|.++....
T Consensus 72 -~~~dd~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 72 -LIWDTMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp -SSCEEEEEEEEEEGGGSCBCS
T ss_pred -CCCCCeEEEEEEEHHHhhhcC
Confidence 889999999999999986443
No 72
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.66 E-value=7.4e-16 Score=132.35 Aligned_cols=90 Identities=33% Similarity=0.568 Sum_probs=79.2
Q ss_pred ceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEEecc
Q psy15955 244 NSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFD 323 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~~ 323 (475)
.+.|.|+|++|++|+..+..|.+||||++++ ++ .+++|++++++.||.|||+|.|.+.... ..|.|+|||++
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~---~~~kT~~~~~t~nP~Wne~f~f~v~~~~---~~l~~~v~d~d 87 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQV--GK---TKKRTKTIYGNLNPVWEENFHFECHNSS---DRIKVRVLDED 87 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE--TT---EEEECCCCCSCSSCEEEEEEEEEECSTT---CEEEEEEEECC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEE--CC---EEEECCccCCCCCCCcccEEEEEecCCC---CEEEEEEEECC
Confidence 5899999999999999999999999999987 22 4569999999999999999999986443 47999999999
Q ss_pred CC-----------CCCeeeEEEEEcCcCC
Q psy15955 324 NI-----------GRNELIGRILLAGKNG 341 (475)
Q Consensus 324 ~~-----------~~d~~lG~~~i~l~~~ 341 (475)
.. +++++||++.|++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~lG~~~i~l~~l 116 (148)
T 3kwu_A 88 DDIKSRVKQRFKRESDDFLGQTIIEVRTL 116 (148)
T ss_dssp CSHHHHHHTTTSSCSSEEEEEEEEEGGGC
T ss_pred CCccccccccccCCCCccEEEEEEEHHHC
Confidence 86 7899999999988654
No 73
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.65 E-value=1.6e-15 Score=134.22 Aligned_cols=99 Identities=26% Similarity=0.349 Sum_probs=78.6
Q ss_pred CCceeEEEEEEeeccCcccccCCCccceEEEEEEeCc-eeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEE
Q psy15955 242 PSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGE-KRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVM 320 (475)
Q Consensus 242 ~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~-~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~ 320 (475)
...+.|.|+|++|++|+..+..+.+||||++++.... +...+++|++++++.||.|||+|.|.+... ...|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~---~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ---RHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT---TCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC---CCEEEEEEE
Confidence 4568999999999999999999999999999987432 334678999999999999999999998743 257999999
Q ss_pred eccCCCCCeeeEEEEEcCcCCCC
Q psy15955 321 DFDNIGRNELIGRILLAGKNGSG 343 (475)
Q Consensus 321 d~~~~~~d~~lG~~~i~l~~~~~ 343 (475)
|++.++++++||++.|++.++..
T Consensus 82 d~d~~~~d~~lG~~~i~l~~l~~ 104 (176)
T 3m7f_B 82 DENRLTRDDFLGQVDVPLYPLPT 104 (176)
T ss_dssp ECC----CEEEEEEEEESCSCCB
T ss_pred ECCCCCCCcEEEEEEEEHHHccc
Confidence 99999999999999998866543
No 74
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.64 E-value=3.5e-16 Score=162.18 Aligned_cols=118 Identities=31% Similarity=0.490 Sum_probs=100.7
Q ss_pred CCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEEeeC
Q psy15955 114 DNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYD 193 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d 193 (475)
..+.|.|+|++|++|++.|..|.+||||+|++ +...++|+++++++||+|||+|.|. +..+....|+|+|||+|
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~---~~~~~~T~~~~~t~nP~w~e~f~f~---~~~~~~~~l~~~v~d~d 458 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISM---GSQSYTTRTIQDTLNPKWNFNCQFF---IKDLYQDVLCLTLFDRD 458 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE---TTEEEECCCCSSCSSCEEEEEEEEE---ESCTTTCEEEEEEEECC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEE---CCeeccCCccCCCCCCccCceEEEE---ecCCCCCEEEEEEEeCC
Confidence 45689999999999999999999999999999 4467899999999999999999998 33445578999999999
Q ss_pred CCCCCccccceeeccccccCCCC----cceeeccCCCCCCcccceeeeeee
Q psy15955 194 RFSRDDSIGEVFLPLCQVDLSEK----PTFWKALKPPAKDKCGELLTSLCY 240 (475)
Q Consensus 194 ~~~~~~~iG~~~i~l~~l~~~~~----~~~~~~L~~~~~~~~G~l~l~l~~ 240 (475)
..+++++||++.++|.++..+.. ...|++|.. ...|+|.+.+.+
T Consensus 459 ~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~---~~~G~i~l~~~l 506 (510)
T 3jzy_A 459 QFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE---VPTGEVWVRFDL 506 (510)
T ss_dssp SSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS---SSSCEEEEEEEE
T ss_pred CCCCCCceEEEEEEHHHhccccCCCCceeeeecCCC---CCCceEEEEEEE
Confidence 99999999999999999975433 567998864 367898888764
No 75
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.63 E-value=5.6e-16 Score=130.37 Aligned_cols=90 Identities=23% Similarity=0.368 Sum_probs=77.8
Q ss_pred ceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEEecc
Q psy15955 244 NSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFD 323 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~~ 323 (475)
...|.|+|++|++|+..+..|.+||||++++.+.+ .+++|+++++++||.|||+|.|.+...+ .|.|+|||++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~----~l~~~v~d~d 76 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG---QCHSTDTVKNTLDPKWNQHYDLYVGKTD----SITISVWNHK 76 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC---CEEECCCCSSCSSCEEEEEEEEEEETTC----CEEEEEEEGG
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC---ceEECCccCCCCCCCccCEEEEEeCCCC----EEEEEEEECC
Confidence 45799999999999999999999999999884332 4679999999999999999999986433 4999999999
Q ss_pred CCCC---CeeeEEEEEcCcC
Q psy15955 324 NIGR---NELIGRILLAGKN 340 (475)
Q Consensus 324 ~~~~---d~~lG~~~i~l~~ 340 (475)
.+++ |++||++.|++.+
T Consensus 77 ~~~~~~~d~~lG~~~i~l~~ 96 (132)
T 3pyc_A 77 KIHKKQGAGFLGCVRLLSNA 96 (132)
T ss_dssp GTTSSTTTTEEEEEEECHHH
T ss_pred CCCCCCCCCceEEEEEeHHH
Confidence 9876 8999999997643
No 76
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.63 E-value=3.4e-16 Score=132.47 Aligned_cols=91 Identities=22% Similarity=0.373 Sum_probs=79.2
Q ss_pred CceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeeccccc-CCCCCeecceEEEeecccccccceEEEEEEe
Q psy15955 243 SNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFK-CNLNPVFNESFSFNVPWEKIRECSLNVMVMD 321 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~-~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d 321 (475)
..+.|.|+|++|++|+..+..+.+||||++++.. .+++|++++ ++.||.|||+|.|.+.. ....|.|+|||
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~d 79 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKIFD 79 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEECC
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC-----ccceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEEEE
Confidence 4678999999999999999999999999997732 245899998 89999999999999874 34579999999
Q ss_pred ccCCCCCeeeEEEEEcCcCC
Q psy15955 322 FDNIGRNELIGRILLAGKNG 341 (475)
Q Consensus 322 ~~~~~~d~~lG~~~i~l~~~ 341 (475)
++.+++|++||++.|++.+.
T Consensus 80 ~~~~~~d~~lG~~~i~l~~l 99 (136)
T 1wfj_A 80 KDVGTEDDAVGEATIPLEPV 99 (136)
T ss_dssp SSSCTTTCCSEEEEEESHHH
T ss_pred CCCCCCCceEEEEEEEHHHh
Confidence 99999999999999987543
No 77
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.60 E-value=1.7e-15 Score=155.42 Aligned_cols=108 Identities=23% Similarity=0.290 Sum_probs=88.5
Q ss_pred CEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEEeeCCC
Q psy15955 116 STLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRF 195 (475)
Q Consensus 116 ~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d~~ 195 (475)
+.|.|+|++|++|+. |..|++||||+|++. .+.+||+++++++||+|||+|.|..+.. .....|+|+|||+|..
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~---~~~~kTkvik~tlNP~Wne~f~f~~~~~--~~~~~L~~~V~D~D~~ 467 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFG---GQEFRTGVVWNNNNPRWTDKMDFENVLL--STGGPLRVQVWDADYG 467 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEET---TEEEECCCBCSCSSCBCCCCEEEEEEET--TTCCCEEEEEEECCSS
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEEC---CEeeeeeeecCCCCCCCCeEEEEEEecC--CCCCEEEEEEEECCCC
Confidence 479999999999999 999999999999993 3568999999999999999999972211 1356899999999999
Q ss_pred CCCccccceeeccccccCCCCcceeeccCCCCCCcccceeeeee
Q psy15955 196 SRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDKCGELLTSLC 239 (475)
Q Consensus 196 ~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~G~l~l~l~ 239 (475)
++||+||++.++|.. +....|.+|. .|.|.+++.
T Consensus 468 ~~dD~LG~~~~~L~~----g~~~~~~~l~------~G~l~~~~~ 501 (540)
T 3nsj_A 468 WDDDLLGSCDRSPHS----GFHEVTCELN------HGRVKFSYH 501 (540)
T ss_dssp SCCEEEEEEEECCCS----EEEEEEEECS------SSEEEEEEE
T ss_pred CCCCEEEEEEEEeeC----CcEEEEEEcC------CeEEEEEEE
Confidence 999999999999872 2346787764 266666643
No 78
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.59 E-value=1.3e-15 Score=160.89 Aligned_cols=109 Identities=24% Similarity=0.386 Sum_probs=95.9
Q ss_pred CCCEEEEEEEEeecCCC---CCCCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEE
Q psy15955 114 DNSTLILRVISAKELPA---KDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVF 190 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~---~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~ 190 (475)
..+.|.|+|++|++|+. +|..|.+||||+|++.+....++||+++++++||+|||+|.|. +. ......|+|+||
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~-v~--~~~~~~L~~~V~ 92 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFI-LD--PNQENVLEITLM 92 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEE-EC--TTSCCBCEEEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEE-ec--CCCCCEEEEEEE
Confidence 35679999999999999 8888999999999997655578899999999999999999998 33 334568999999
Q ss_pred eeCCCCCCccccceeeccccccCCCCcceeeccCCC
Q psy15955 191 DYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPP 226 (475)
Q Consensus 191 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 226 (475)
|+|.++ +++||++.++|.++..+.....|++|.+.
T Consensus 93 D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 93 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp ECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred ECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 999998 99999999999999888888899999764
No 79
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=2.6e-15 Score=131.07 Aligned_cols=88 Identities=25% Similarity=0.402 Sum_probs=71.7
Q ss_pred CCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeec-CCCCceeeeeEEeecccccccccceEEEEEEeeC
Q psy15955 115 NSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKR-RTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYD 193 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~-~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d 193 (475)
.+.|.|+|++|++|+ ..+.+||||+|.. +..||+++. +++||+|||+|.|. +. .. ...|.|+|||+|
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~~-----~~~kt~~~~~~t~nP~WnE~f~f~-v~--~~-~~~L~~~V~D~d 80 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLKV-----QNVESTTIAVRGSQPSWEQDFMFE-IN--RL-DLGLTVEVWNKG 80 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEEE-----TTEEEECCCEESSSCEEEEEEEEE-CC--CT-TSEEEEEEEECC
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEEe-----cceEEEEecCCCCCCCCCCEEEEE-ee--CC-CCEEEEEEEECC
Confidence 457999999999884 2678999999992 235676665 69999999999998 33 32 357999999999
Q ss_pred CCCCCccccceeeccccccCCC
Q psy15955 194 RFSRDDSIGEVFLPLCQVDLSE 215 (475)
Q Consensus 194 ~~~~~~~iG~~~i~l~~l~~~~ 215 (475)
+++|++||++.++|.++....
T Consensus 81 -~~~dd~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 81 -LIWDTMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp -SSCCEEEEEEEEEGGGSCBCS
T ss_pred -CCCCceEEEEEEEHHHhcccC
Confidence 888999999999999986443
No 80
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.56 E-value=1.3e-14 Score=127.47 Aligned_cols=89 Identities=21% Similarity=0.246 Sum_probs=74.9
Q ss_pred CceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEEec
Q psy15955 243 SNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDF 322 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~ 322 (475)
..+.|.|+|++|++|+..+..+.+||||+|++. + .+++|+++++++||+|||+|.|.+.. ...|.|+|||+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~--~---~~~kT~v~~~tlnP~Wne~f~f~v~~----~~~L~~~V~D~ 104 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVD--G---QSKKTEKCNNTNSPKWKQPLTVIVTP----VSKLHFRVWSH 104 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEET--T---EEEECCCCSSCSSCEEEEEEEEEECT----TCEEEEEEEEC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEEC--C---EEeEccccCCCCCCeECCEEEEEeCC----CCEEEEEEEEC
Confidence 457899999999999944444459999999873 2 56799999999999999999999853 45799999999
Q ss_pred cCCCCCeeeEEEEEcCcC
Q psy15955 323 DNIGRNELIGRILLAGKN 340 (475)
Q Consensus 323 ~~~~~d~~lG~~~i~l~~ 340 (475)
+.++++++||++.|++.+
T Consensus 105 d~~~~dd~lG~~~i~l~~ 122 (173)
T 2nq3_A 105 QTLKSDVLLGTAALDIYE 122 (173)
T ss_dssp CSSSCCEEEEEEEEEHHH
T ss_pred CCCCCCceEEEEEEEHHH
Confidence 999999999999998754
No 81
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.51 E-value=9.4e-14 Score=148.38 Aligned_cols=126 Identities=33% Similarity=0.556 Sum_probs=106.8
Q ss_pred CCCCcccEEEEEEEEeCCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC--CceEEeeeecCCCCceeeeeEEeec
Q psy15955 97 EPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK--KHRLETKIKRRTLNPRWNETLYFEG 174 (475)
Q Consensus 97 ~~~~~~G~i~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~--~~~~kT~v~~~~~nP~w~e~f~f~~ 174 (475)
......|+|.+++.+ ..+.|.|.|++|++|+++|..|.+||||++++.+++ ..+.+|+++++++||+|||+|.|.
T Consensus 155 d~~~~~g~i~~~~~~--~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~- 231 (674)
T 3pfq_A 155 DHTERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQ- 231 (674)
T ss_dssp CSSCCSCEEEEEEEE--CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEE-
T ss_pred cccccccccccccee--ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeee-
Confidence 345668999998888 478999999999999999999999999999997653 356899999999999999999998
Q ss_pred ccccccccceEEEEEEeeCCCCCCccccceeeccccccCCCCcceeeccCCCC
Q psy15955 175 FPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPA 227 (475)
Q Consensus 175 ~~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~ 227 (475)
+...+ ....|.|+|||+|..+++++||++.+++.++.... ...|+.|....
T Consensus 232 ~~~~~-~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~ 282 (674)
T 3pfq_A 232 LKESD-KDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQE 282 (674)
T ss_dssp CCSTT-TTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCTT
T ss_pred cccCC-ccceeeeEEeecccccccccccccccchhhhccCC-cccceeecccc
Confidence 44333 34569999999999999999999999999997654 47899886543
No 82
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.48 E-value=1.5e-13 Score=115.11 Aligned_cols=85 Identities=19% Similarity=0.263 Sum_probs=68.2
Q ss_pred ceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccc-cCCCCCeecceEEEeecccccccceEEEEEEec
Q psy15955 244 NSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIF-KCNLNPVFNESFSFNVPWEKIRECSLNVMVMDF 322 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~-~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~ 322 (475)
.+.|.|+|++|++|+. .|.+||||++. . ...+|+++ .++.||.|||+|.|.+... ...|.|+|||+
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~---~~~L~~~V~D~ 70 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--V-----QNVKSTTIAVRGSQPSWEQDFMFEINRL---DLGLTVEVWNK 70 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEEECCC---SSEEEEEEEEC
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--e-----cCEEEeEecCCCCCceECCEEEEEEeCC---CCeEEEEEEEC
Confidence 4689999999998853 67899999997 1 12244444 4799999999999999743 24699999999
Q ss_pred cCCCCCeeeEEEEEcCcCCC
Q psy15955 323 DNIGRNELIGRILLAGKNGS 342 (475)
Q Consensus 323 ~~~~~d~~lG~~~i~l~~~~ 342 (475)
+ +++|++||++.|++.+..
T Consensus 71 d-~~~dd~iG~~~i~l~~l~ 89 (131)
T 2cjt_A 71 G-LIWDTMVGTVWIPLRTIR 89 (131)
T ss_dssp C-SSCEEEEEEEEEEGGGSC
T ss_pred C-CCCCCeEEEEEEEHHHhh
Confidence 9 889999999999986643
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.47 E-value=4.4e-15 Score=151.82 Aligned_cols=101 Identities=27% Similarity=0.447 Sum_probs=13.7
Q ss_pred CCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCceEEeeeecCC---CCceeeeeEEeecccccccccceEEEEEEe
Q psy15955 115 NSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRT---LNPRWNETLYFEGFPIQKLQSRVLHLHVFD 191 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~~---~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d 191 (475)
.+.|.|+|++|++|+++| ||||++++. +....||++++++ +||+|||+|.|.+++ . ...|.|+|||
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~--~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~--~--~~~L~v~V~d 78 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLD--DMLYARTTSKPRSASGDTVFWGEHFEFNNLP--A--VRALRLHLYR 78 (483)
T ss_dssp EECC----------------------------------------------------CCEECC------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEEC--CeEEeeeeEEeCCCCCCCCccccEEEEecCC--C--ccEEEEEEEe
Confidence 357999999999999886 999999983 3345699999999 999999999998422 1 3689999999
Q ss_pred e-C---CCCCCccccceeeccccccCCCCcceeeccCCC
Q psy15955 192 Y-D---RFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPP 226 (475)
Q Consensus 192 ~-d---~~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 226 (475)
. | +.+++++||.+.|++.++..+.....|++|...
T Consensus 79 ~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~ 117 (483)
T 3bxj_A 79 DSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLP 117 (483)
T ss_dssp ----------------------------CCEECC-----
T ss_pred cCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCC
Confidence 4 4 367899999999999999888788899999543
No 84
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.44 E-value=2.1e-13 Score=112.58 Aligned_cols=89 Identities=21% Similarity=0.356 Sum_probs=77.5
Q ss_pred eeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeeccccc-CCCCCeecceEEEeecccccccceEEEEEEecc
Q psy15955 245 SVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFK-CNLNPVFNESFSFNVPWEKIRECSLNVMVMDFD 323 (475)
Q Consensus 245 ~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~-~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~~ 323 (475)
-.|+|.|..|.+|+ |++|||+++.+ +-.+++|++++ ++.||+|||.|+|++......+..|.|.|+|++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~F-----Rg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTF-----RGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEE-----TTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEE-----eccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 46889999999998 47899999977 23567999998 699999999999999876666788999999999
Q ss_pred CCCCCeeeEEEEEcCcCCCC
Q psy15955 324 NIGRNELIGRILLAGKNGSG 343 (475)
Q Consensus 324 ~~~~d~~lG~~~i~l~~~~~ 343 (475)
+++++.+||++.++|.+...
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~ 110 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVE 110 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHH
T ss_pred cccCCCEEEEEEEEhHHhcc
Confidence 99999999999999865443
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.41 E-value=3.1e-13 Score=142.79 Aligned_cols=108 Identities=21% Similarity=0.360 Sum_probs=90.9
Q ss_pred CceeEEEEEEeeccCcc---cccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEE
Q psy15955 243 SNSVLTITLLKARNLKA---KDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMV 319 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~---~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V 319 (475)
..+.|.|.|++|++|+. +|..|++||||+|++.... ..+++|+++++++||+|||+|.|.+.... ...|.|+|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~--~~k~kTkvik~tlNPvWNEtF~F~v~~~~--~~~L~~~V 91 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQ--ENVLEITL 91 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTS--CCBCEEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCC--CCeEecceEcCCCCCeeeeEEEEEecCCC--CCEEEEEE
Confidence 46899999999999999 8888999999999875322 25679999999999999999999997532 35799999
Q ss_pred EeccCCCCCeeeEEEEEcCcCCCCCccccccccccc
Q psy15955 320 MDFDNIGRNELIGRILLAGKNGSGASETKHWQDMIT 355 (475)
Q Consensus 320 ~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~ 355 (475)
||++.++ +++||++.|++.++..+....+|.++..
T Consensus 92 ~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 92 MDANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred EECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 9999998 9999999999988766666667777643
No 86
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.41 E-value=7.1e-13 Score=135.94 Aligned_cols=89 Identities=22% Similarity=0.289 Sum_probs=76.6
Q ss_pred ceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEEecc
Q psy15955 244 NSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFD 323 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~~ 323 (475)
.+.|.|.|++|++|+. |..|++||||+|++. + .+++|+++++++||+|||+|.|.+.... ....|.|+|||+|
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~--~---~~~kTkvik~tlNP~Wne~f~f~~~~~~-~~~~L~~~V~D~D 465 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFG--G---QEFRTGVVWNNNNPRWTDKMDFENVLLS-TGGPLRVQVWDAD 465 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEET--T---EEEECCCBCSCSSCBCCCCEEEEEEETT-TCCCEEEEEEECC
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEEC--C---EeeeeeeecCCCCCCCCeEEEEEEecCC-CCCEEEEEEEECC
Confidence 4689999999999998 999999999999873 2 2479999999999999999999853211 2457999999999
Q ss_pred CCCCCeeeEEEEEcCc
Q psy15955 324 NIGRNELIGRILLAGK 339 (475)
Q Consensus 324 ~~~~d~~lG~~~i~l~ 339 (475)
..++|++||.+.+++.
T Consensus 466 ~~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 466 YGWDDDLLGSCDRSPH 481 (540)
T ss_dssp SSSCCEEEEEEEECCC
T ss_pred CCCCCCEEEEEEEEee
Confidence 9999999999999874
No 87
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.40 E-value=1.3e-12 Score=136.98 Aligned_cols=99 Identities=22% Similarity=0.358 Sum_probs=84.2
Q ss_pred CceeEEEEEEeeccCccccc--CCCccceEEEEEEeCceeeeeeecccccCC-CCCeecceEEEeecccccccceEEEEE
Q psy15955 243 SNSVLTITLLKARNLKAKDI--NGKSDPYVKVWLQFGEKRIEKRKTQIFKCN-LNPVFNESFSFNVPWEKIRECSLNVMV 319 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~~~~--~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t-~nP~w~e~f~f~v~~~~l~~~~l~i~V 319 (475)
..+.|.|+|++|++|+..+. .+.+||||+|.+........+++|++++++ .||+|||+|.|.+...++ ..|.|+|
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el--~~L~~~V 572 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDL--ALVRFMV 572 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGG--CEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCC--CEEEEEE
Confidence 45789999999999999874 688999999998654333356799999997 999999999999986665 4799999
Q ss_pred EeccCCCCCeeeEEEEEcCcCCCC
Q psy15955 320 MDFDNIGRNELIGRILLAGKNGSG 343 (475)
Q Consensus 320 ~d~~~~~~d~~lG~~~i~l~~~~~ 343 (475)
||++.++++++||++.|++..+..
T Consensus 573 ~D~D~~~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 573 EDYDSSSKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp EECCSSSCCEEEEEEEEEGGGBCC
T ss_pred EEcCCCCCCceeEEEEEEHHHcCC
Confidence 999999999999999999866543
No 88
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.40 E-value=7e-13 Score=115.55 Aligned_cols=85 Identities=16% Similarity=0.245 Sum_probs=68.7
Q ss_pred ceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeeccccc-CCCCCeecceEEEeecccccccceEEEEEEec
Q psy15955 244 NSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFK-CNLNPVFNESFSFNVPWEKIRECSLNVMVMDF 322 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~-~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~ 322 (475)
.+.|.|+|++|++|+ ..+.+||||++. . ..++|++++ ++.||.|||+|.|.+... ...|.|+|||+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~---~~~L~~~V~D~ 79 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--V-----QNVESTTIAVRGSQPSWEQDFMFEINRL---DLGLTVEVWNK 79 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEECCCT---TSEEEEEEEEC
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--e-----cceEEEEecCCCCCCCCCCEEEEEeeCC---CCEEEEEEEEC
Confidence 458999999999885 367899999997 1 123455554 699999999999998743 34699999999
Q ss_pred cCCCCCeeeEEEEEcCcCCC
Q psy15955 323 DNIGRNELIGRILLAGKNGS 342 (475)
Q Consensus 323 ~~~~~d~~lG~~~i~l~~~~ 342 (475)
+ +++|++||++.|++.+..
T Consensus 80 d-~~~dd~iG~~~i~L~~l~ 98 (167)
T 2cjs_A 80 G-LIWDTMVGTVWIPLRTIR 98 (167)
T ss_dssp C-SSCCEEEEEEEEEGGGSC
T ss_pred C-CCCCceEEEEEEEHHHhc
Confidence 9 889999999999997654
No 89
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.40 E-value=4.9e-13 Score=138.48 Aligned_cols=93 Identities=25% Similarity=0.389 Sum_probs=80.0
Q ss_pred CCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccccceEEEEEEe
Q psy15955 242 PSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMD 321 (475)
Q Consensus 242 ~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d 321 (475)
...+.|.|+|++|++|+..+..|.+||||++++ ++ .+++|+++++++||.|||+|.|.+.. .....|.|+|||
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~--~~---~~~~T~~~~~t~nP~w~e~f~f~~~~--~~~~~l~~~v~d 456 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISM--GS---QSYTTRTIQDTLNPKWNFNCQFFIKD--LYQDVLCLTLFD 456 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE--TT---EEEECCCCSSCSSCEEEEEEEEEESC--TTTCEEEEEEEE
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEE--CC---eeccCCccCCCCCCccCceEEEEecC--CCCCEEEEEEEe
Confidence 346789999999999999999999999999987 22 35799999999999999999999863 344679999999
Q ss_pred ccCCCCCeeeEEEEEcCcCC
Q psy15955 322 FDNIGRNELIGRILLAGKNG 341 (475)
Q Consensus 322 ~~~~~~d~~lG~~~i~l~~~ 341 (475)
++.+++|++||++.+++.+.
T Consensus 457 ~d~~~~~d~lG~~~~~l~~l 476 (510)
T 3jzy_A 457 RDQFSPDDFLGRTEIPVAKI 476 (510)
T ss_dssp CCSSSSCCEEEEEEEEHHHH
T ss_pred CCCCCCCCceEEEEEEHHHh
Confidence 99999999999999987543
No 90
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.39 E-value=5.7e-13 Score=142.29 Aligned_cols=123 Identities=30% Similarity=0.472 Sum_probs=103.4
Q ss_pred CcccceeeeeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccc
Q psy15955 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWE 308 (475)
Q Consensus 229 ~~~G~l~l~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~ 308 (475)
...|.|.+++.+. .+.|.|.|++|++|..++..|.+||||++++.+++....+++|+++++++||.|||+|.|.+...
T Consensus 158 ~~~g~i~~~~~~~--~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~ 235 (674)
T 3pfq_A 158 ERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKES 235 (674)
T ss_dssp CCSCEEEEEEEEC--SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCST
T ss_pred cccccccccceec--cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccC
Confidence 4568888888775 57899999999999999999999999999998776666678999999999999999999998765
Q ss_pred ccccceEEEEEEeccCCCCCeeeEEEEEcCcCCCCCccccccccccc
Q psy15955 309 KIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMIT 355 (475)
Q Consensus 309 ~l~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~ 355 (475)
+. ...|.|+|||++..+++++||.+.+++.+.... +..+|..++.
T Consensus 236 ~~-~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~-~~~~w~~Lls 280 (674)
T 3pfq_A 236 DK-DRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 280 (674)
T ss_dssp TT-TCEEEEEEEECCSSSCCEECCBCCCBTTHHHHC-CEEEEEECBC
T ss_pred Cc-cceeeeEEeecccccccccccccccchhhhccC-Ccccceeecc
Confidence 53 456999999999999999999999988665432 3466776654
No 91
>3oym_A PFV integrase, P42IN; protein-DNA complex; HET: DNA; 2.02A {Human spumaretrovirus} PDB: 3oyn_A* 3s3o_A* 4be2_A* 3l2q_A 3l2s_A 3l2r_A* 3l2u_A* 3l2v_A* 3l2w_A* 3l2t_A* 3os1_A* 3os2_A* 3os0_A* 3oya_A* 3oy9_A* 3oyc_A* 3oyd_A* 3oye_A* 3oyb_A* 3oyg_A* ...
Probab=99.28 E-value=5.1e-13 Score=133.76 Aligned_cols=103 Identities=21% Similarity=0.236 Sum_probs=95.2
Q ss_pred cccCCCcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhc---cccchHHHHHHHHHHhc
Q psy15955 353 MITKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKC---NWNNVDEELLNFSQSYN 429 (475)
Q Consensus 353 ~~~~p~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~---~~~~~~~~l~~~l~~y~ 429 (475)
..+.|....++.+..+.+..|+.+|...|+.+..+++++|++||.+||+|++++..+++. ....|.+.|+.++++||
T Consensus 178 ~~g~p~~i~sDnG~~f~s~~~~~~~~~~gi~~~~s~~~~p~~nG~~Er~n~~lk~~l~~~~~~~~~~w~~~l~~~~~~~N 257 (395)
T 3oym_A 178 SIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKHSDIKRLLTKLLVGRPTKWYDLLPVVQLALN 257 (395)
T ss_dssp TTCCCSEEEECSCHHHHSHHHHHHHHHTTCEEEECCTTCGGGGHHHHHHHHHHHHHHHHHHTTSCCCCGGGHHHHHHHHH
T ss_pred ccCCceEEEeCCCCceecHHHHHHHHHcCCceeecCCcCCcccChhhhHHHHHHHHHHHHhhcCccCHHHHHHHHHHHHh
Confidence 345677888999999999999999999999999999999999999999999999999875 34789999999999999
Q ss_pred CccCCCCCCChhhhhcCCccCccccc
Q psy15955 430 STPHTTLGVSPAELHLGRKLKTTFDK 455 (475)
Q Consensus 430 ~~~~~~~~~sP~~l~~gr~~~~~~~~ 455 (475)
++||.++|.||++++||+++++|++.
T Consensus 258 ~~~~~~~g~tP~~l~~g~~~~~p~~~ 283 (395)
T 3oym_A 258 NTYSPVLKYTPHQLLFGIDSNTPFAN 283 (395)
T ss_dssp TCCBTTTTBCHHHHHHSSCCSSTTCC
T ss_pred CCCCcccCCCHHHHHcCCCCCCcchh
Confidence 99999999999999999999999874
No 92
>2x78_A Integrase; viral protein, DNA-directed DNA polyme nucleotidyltransferase, DNA integration, aspartyl protease, recombination, transferase; 2.00A {Human spumaretrovirus} PDB: 2x6n_A 2x6s_A 2x74_A 3dlr_A
Probab=99.27 E-value=8.4e-13 Score=119.09 Aligned_cols=102 Identities=21% Similarity=0.198 Sum_probs=78.3
Q ss_pred cCCCcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhcc---ccchHHHHHHHHHHhcCc
Q psy15955 355 TKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCN---WNNVDEELLNFSQSYNST 431 (475)
Q Consensus 355 ~~p~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~---~~~~~~~l~~~l~~y~~~ 431 (475)
+.|....++.+.-+.+..|..+|...|+.+..+.+++|+.||.+||++++++..+++.. ...|.+.|..+++.||++
T Consensus 68 g~p~~i~sDnG~~f~s~~~~~~~~~~gi~~~~~~p~~p~~ng~~Er~~~~l~~~~~~~~~~~~~~w~~~l~~~~~~~N~~ 147 (200)
T 2x78_A 68 AIPRVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSGSKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNT 147 (200)
T ss_dssp CCCSEEEECSCHHHHSHHHHHHHHHHTCEEEECC-------CHHHHHHHHHHHHHHHHHHTCTTTTTTTHHHHHHHHHTS
T ss_pred CCCcEEEecCCcceehHHHHHHHHHcCceEeECCCCCCCccCHhHhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHcCC
Confidence 44666778888888888899999999999999999999999999999999999987652 356999999999999999
Q ss_pred cCCCCCCChhhhhcCCccCcccccc
Q psy15955 432 PHTTLGVSPAELHLGRKLKTTFDKL 456 (475)
Q Consensus 432 ~~~~~~~sP~~l~~gr~~~~~~~~~ 456 (475)
||..+|.||+|++||+++++|++..
T Consensus 148 ~~~~~~~tP~e~~~g~~~~~p~~~~ 172 (200)
T 2x78_A 148 YSPVLKYTPHQLLFGIDSNTPFANQ 172 (200)
T ss_dssp CBTTTTBCHHHHHHCCC--------
T ss_pred CCcccCCChHHHHhCCCCCCccccc
Confidence 9999999999999999999998753
No 93
>3hph_A Integrase, IN; protein-protein complex, tetramer, DNA integration, endonucl magnesium, metal-binding, multifunctional enzyme; 2.64A {Maedi visna virus} PDB: 3hpg_A
Probab=99.14 E-value=4.1e-12 Score=116.32 Aligned_cols=98 Identities=20% Similarity=0.260 Sum_probs=88.2
Q ss_pred ccccccCCCcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhccc--cchHHHHHHHHHH
Q psy15955 350 WQDMITKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCNW--NNVDEELLNFSQS 427 (475)
Q Consensus 350 w~~~~~~p~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~~--~~~~~~l~~~l~~ 427 (475)
+....+ |....++.+..+.+..|.++|...|+.+..+++++|++||.+||+|++++..+++... ..|...|+.+++.
T Consensus 106 ~~~~~g-p~~i~sDnG~~F~s~~~~~~~~~~gi~~~~s~p~~p~~nG~~Er~~~~lk~~l~~~~~~~~~~~~~l~~~~~~ 184 (219)
T 3hph_A 106 WYAMFA-PKSLQSDNGPAFVAESTQLLMKYLGIEHTTGIPWNPQSQALVERTHQTLKNTLEKLIPMFNAFESALAGTLIT 184 (219)
T ss_dssp HHHHHC-CCEEEECCCHHHHSHHHHHHHHHHTCEEEESCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHHHHH
T ss_pred HHHHhC-CcEEEeCCCchhhhHHHHHHHHHcCCeEeECCCCCCcccChhhhHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 333445 7888899999999999999999999999999999999999999999999999987643 7899999999999
Q ss_pred hcCccCCCCCCChhhhhcCCc
Q psy15955 428 YNSTPHTTLGVSPAELHLGRK 448 (475)
Q Consensus 428 y~~~~~~~~~~sP~~l~~gr~ 448 (475)
||++|+.++|.||+|+++|++
T Consensus 185 ~N~~~~~~lg~tP~e~~~~~~ 205 (219)
T 3hph_A 185 LNIKRKGGLGTSPMDIFIFNK 205 (219)
T ss_dssp HHTTCCCTTSCCHHHHHHHHH
T ss_pred HhCCCCCccCcCHHHHHhCCh
Confidence 999999999999999888764
No 94
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.11 E-value=6.8e-12 Score=128.21 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=13.2
Q ss_pred ceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCC---CCCeecceEEEeecccccccceEEEEEE
Q psy15955 244 NSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCN---LNPVFNESFSFNVPWEKIRECSLNVMVM 320 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t---~nP~w~e~f~f~v~~~~l~~~~l~i~V~ 320 (475)
.+.|.|+|++|++|++++ ||||++++. + ..+.||++++++ .||.|||+|.|.+... ...|.|+||
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~--~--~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~---~~~L~v~V~ 77 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLD--D--MLYARTTSKPRSASGDTVFWGEHFEFNNLPA---VRALRLHLY 77 (483)
T ss_dssp EECC------------------------------------------------------CCEECC----------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEEC--C--eEEeeeeEEeCCCCCCCCccccEEEEecCCC---ccEEEEEEE
Confidence 468999999999999876 999999873 2 124589999999 9999999999986432 257999999
Q ss_pred ec-c---CCCCCeeeEEEEEcCcCCCCCccccccccccc
Q psy15955 321 DF-D---NIGRNELIGRILLAGKNGSGASETKHWQDMIT 355 (475)
Q Consensus 321 d~-~---~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~ 355 (475)
|. + ..+++++||.+.|++.+...+...++|..+..
T Consensus 78 d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 78 RDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp -----------------------------CCEECC----
T ss_pred ecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 94 4 36789999999999988776666777887754
No 95
>3kks_A Integrase, IN; beta-strands flanked by alpha-helices, DNA binding protein; 2.20A {Bovine immunodeficiency virus} PDB: 3kkr_A
Probab=99.03 E-value=2.1e-11 Score=104.52 Aligned_cols=98 Identities=18% Similarity=0.163 Sum_probs=86.7
Q ss_pred ccccccCCCcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhccc--cchHHHHHHHHHH
Q psy15955 350 WQDMITKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCNW--NNVDEELLNFSQS 427 (475)
Q Consensus 350 w~~~~~~p~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~~--~~~~~~l~~~l~~ 427 (475)
|....+ |....++.+..+.+..|..+|...|+.+..+++++|+.||.+||++++++..+++... ..|.+.|..+++.
T Consensus 48 ~~~~~g-p~~i~sDnG~~f~s~~~~~~~~~~gi~~~~~~p~~p~~ng~~Er~~~~lk~~~~~~~~~~~~~~~~l~~~~~~ 126 (152)
T 3kks_A 48 LIQRYT-VLHLHSDNGPCFTAHRIENLCKYLGITKTTGIPYNPQSQGVVERAHRDLKDRLAAYQGDCETVEAALSLALVS 126 (152)
T ss_dssp HHHHSC-CSEEEECSCHHHHSHHHHHHHHHTTCEEEESSCSCHHHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHHHHH
T ss_pred HHHHhC-CcEEecCCchHhhHHHHHHHHHHcCCeecccCCcCCCccchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 333345 7778888888888899999999999999999999999999999999999999887643 7899999999999
Q ss_pred hcCccCCCCC-CChhhhhcCCcc
Q psy15955 428 YNSTPHTTLG-VSPAELHLGRKL 449 (475)
Q Consensus 428 y~~~~~~~~~-~sP~~l~~gr~~ 449 (475)
|| +||..+| .||+|++++.+.
T Consensus 127 ~N-~~~~~l~~~tP~e~~~~~~~ 148 (152)
T 3kks_A 127 LN-KKRGGIGGHTPYEIYLESEH 148 (152)
T ss_dssp HH-HSCCCSTTCCHHHHHHHHHH
T ss_pred Hc-CccccCCCCCHHHHHHhCcC
Confidence 99 9999997 999999997653
No 96
>1k6y_A Integrase; HIV-1, domain organization, transferase; 2.40A {Human immunodeficiency virus 1} SCOP: a.4.10.1 c.55.3.2 PDB: 1wjb_A 1wjd_A 1wjf_A 1wja_A 1wjc_A 1wje_A
Probab=99.02 E-value=7e-11 Score=107.46 Aligned_cols=92 Identities=13% Similarity=0.099 Sum_probs=74.1
Q ss_pred CcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhcc--ccchHHHHHHHHHHhcCccCCC
Q psy15955 358 RQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCN--WNNVDEELLNFSQSYNSTPHTT 435 (475)
Q Consensus 358 ~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~--~~~~~~~l~~~l~~y~~~~~~~ 435 (475)
....++.+..+.+..|+.+|...|+.+..+++++|+.||.+||++++++..+++.. ...|.+.|..+++.||.+||.+
T Consensus 111 ~~i~sDnG~~f~s~~~~~~~~~~gi~~~~s~p~~p~~nG~~Er~~~~lk~~l~~~~~~~~~~~~~l~~~~~~~N~~~~~~ 190 (212)
T 1k6y_A 111 KTVHTDNGSNFTSTTVKAACDWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKRKGG 190 (212)
T ss_dssp CEEECCCSTTTTSHHHHHHHHHHTCEECCC---------HHHHHHHHHHHHHHTTGGGCSSHHHHHHHHHHHHHHSCCBT
T ss_pred eEEEcCCCcccccHHHHHHHHHCCCeeeECCCCCCcchhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcccccCC
Confidence 45668888888899999999999999999999999999999999999999997653 3789999999999999999998
Q ss_pred C-CCChhhhhcCCcc
Q psy15955 436 L-GVSPAELHLGRKL 449 (475)
Q Consensus 436 ~-~~sP~~l~~gr~~ 449 (475)
+ |.||+|+++|+.+
T Consensus 191 l~~~tP~e~~~~~~p 205 (212)
T 1k6y_A 191 IGGYSAGERIVDIIA 205 (212)
T ss_dssp TTTBCHHHHHHHHHH
T ss_pred CCCCCHHHHHhcCCc
Confidence 8 7999999998754
No 97
>3f9k_A Integrase; protein-protein complex, AIDS, DNA integration, endonuclease magnesium, metal-binding, multifunctional enzyme; 3.20A {Human immunodeficiency virus type 2} PDB: 1e0e_A
Probab=99.00 E-value=2e-10 Score=104.25 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=83.0
Q ss_pred CcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhccc--cchHHHHHHHHHHhcCccCCC
Q psy15955 358 RQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCNW--NNVDEELLNFSQSYNSTPHTT 435 (475)
Q Consensus 358 ~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~~--~~~~~~l~~~l~~y~~~~~~~ 435 (475)
....++.+..+.+..|.++|...|+.+..+++|+|++||.+||+|++++..|++... ..|...|..+.+.||..++.+
T Consensus 112 ~~i~sDnG~~F~s~~~~~~~~~~gi~~~~s~~~~p~~nG~~Er~n~~lk~~l~~~~~~~~~~~~~l~~~~~~~N~~~~~~ 191 (210)
T 3f9k_A 112 THLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGG 191 (210)
T ss_dssp SEEEECCCTTTSSHHHHHHHHHHTCEEEESSCCCTTCTTHHHHHHHHHHHHHHHTGGGCSSHHHHHHHHHHHHHHSCCBT
T ss_pred CEEEeCCCchhhHHHHHHHHHHCCCceeeCCCcCCCcccHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHhccCCCC
Confidence 347799999999999999999999999999999999999999999999999988743 789999999999999999988
Q ss_pred CC-CChhhhhcCCc
Q psy15955 436 LG-VSPAELHLGRK 448 (475)
Q Consensus 436 ~~-~sP~~l~~gr~ 448 (475)
+| +||+|+++++-
T Consensus 192 l~~~tP~e~~~~~~ 205 (210)
T 3f9k_A 192 IGDMTPSERLINMI 205 (210)
T ss_dssp TTTBCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHh
Confidence 87 69999998753
No 98
>1c6v_A Protein (SIV integrase); DNA integration, DNA binding protein; 3.00A {Simian immunodeficiency virus} SCOP: c.55.3.2
Probab=98.98 E-value=2.4e-10 Score=99.06 Aligned_cols=91 Identities=19% Similarity=0.185 Sum_probs=70.7
Q ss_pred CCcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhcc--ccchHHHHHHHHHHhcCccCC
Q psy15955 357 PRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCN--WNNVDEELLNFSQSYNSTPHT 434 (475)
Q Consensus 357 p~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~--~~~~~~~l~~~l~~y~~~~~~ 434 (475)
+....++.+.-+.+..|+.+|...|+.+..+++++|+.||.+||++++++..+++.. ...|...|..++..||.+||.
T Consensus 61 ~~~i~sDnG~~f~s~~~~~~~~~~gi~~~~~~p~~p~~ng~vEr~~~~lk~~l~~~~~~~~~~~~~l~~~~~~~N~~~~~ 140 (164)
T 1c6v_A 61 ITHLHTDNGANFASQEVKMVAWWAGIEHTFGVPYNPQSQGVVEAMNHHLKNQIDRIREQANSVETIVLMAVHCMNHKRRG 140 (164)
T ss_dssp CCEEECCCCSSTTSSHHHHHHHHHTCEEECC-----------CCTTTHHHHHHHTTTTSSSCHHHHHHHHHHHHHSCCCS
T ss_pred CCEEEeCCchhhhhHHHHHHHHHcCCeEeECCCCCCcccceehHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhcCccC
Confidence 455667888888888999999999999999999999999999999999999888753 277999999999999999999
Q ss_pred CC-CCChhhhhcCC
Q psy15955 435 TL-GVSPAELHLGR 447 (475)
Q Consensus 435 ~~-~~sP~~l~~gr 447 (475)
.+ |.||+|+++|.
T Consensus 141 ~l~~~tP~e~~~~~ 154 (164)
T 1c6v_A 141 GIGDMTPAERLINM 154 (164)
T ss_dssp SSSCCCHHHHHHHH
T ss_pred CCCCCCHHHHHhcc
Confidence 88 68999999984
No 99
>3l3u_A POL polyprotein; DNA integration, AIDS, integrase, endonuclease, polynucleotidyl transferase, DNA binding, viral protein; 1.40A {Human immunodeficiency virus 1} PDB: 3ao1_A 3l3v_A* 3ovn_A* 3ao2_A* 3ao3_A* 3ao4_A* 3ao5_A* 2itg_A 1biz_A 1biu_A 1b9d_A 4dmn_A* 2b4j_A 1itg_A 1b92_A 1bl3_A 1bi4_A 1bis_A 1b9f_A 1bi4_B ...
Probab=98.98 E-value=1.3e-10 Score=100.93 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=81.8
Q ss_pred CcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhccc--cchHHHHHHHHHHhcCccCCC
Q psy15955 358 RQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCNW--NNVDEELLNFSQSYNSTPHTT 435 (475)
Q Consensus 358 ~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~~--~~~~~~l~~~l~~y~~~~~~~ 435 (475)
....++.+..+.+..|+++|...|+.+..+.+++|+.||.+||++++++..+.+... ..|...+..+.+.||..||.+
T Consensus 62 ~~i~sD~G~~f~s~~~~~~~~~~gi~~~~~~p~~p~~ng~~Er~~~~lk~~~~~~~~~~~~~~~~l~~~~~~~N~~~~~~ 141 (163)
T 3l3u_A 62 KTVHTDNGSNFTSTTVKAACDWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGG 141 (163)
T ss_dssp CEEEECCCGGGGSHHHHHHHHHHTCEEEETCCCCCCSTTCCSCHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHCEESS
T ss_pred cEEeecChHhhhhHHHHHHHHHCCceeeeCCCCCcccccHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccCCCCC
Confidence 556688888889999999999999999999999999999999999999998887643 779999999999999999999
Q ss_pred CC-CChhhhhcCC
Q psy15955 436 LG-VSPAELHLGR 447 (475)
Q Consensus 436 ~~-~sP~~l~~gr 447 (475)
+| .||+|++.+.
T Consensus 142 l~~~tP~e~~~~~ 154 (163)
T 3l3u_A 142 IGGYSAGERIVDI 154 (163)
T ss_dssp TTCEEHHHHHHHH
T ss_pred CCCCChHHHHHHH
Confidence 97 9999998764
No 100
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.93 E-value=3.2e-09 Score=113.48 Aligned_cols=89 Identities=21% Similarity=0.341 Sum_probs=72.3
Q ss_pred eeEEEEEEeeccCcccccCCCccceEEEEEEeCce--eeeeeecccccC-CCCCeecce-EEEe-ecccccccceEEEEE
Q psy15955 245 SVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEK--RIEKRKTQIFKC-NLNPVFNES-FSFN-VPWEKIRECSLNVMV 319 (475)
Q Consensus 245 ~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~--~~~~~~T~~~~~-t~nP~w~e~-f~f~-v~~~~l~~~~l~i~V 319 (475)
..|.|+|+.|++|+.. .+||||+|.+..... ...+++|+++++ +.||+|||+ |.|. |..+++ ..|.|+|
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel--a~Lrf~V 723 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL--AVVRIIV 723 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG--CEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc--cEEEEEE
Confidence 5799999999999853 589999999864322 225679999886 599999998 9998 876665 4799999
Q ss_pred EeccCCCCCeeeEEEEEcCcCCCC
Q psy15955 320 MDFDNIGRNELIGRILLAGKNGSG 343 (475)
Q Consensus 320 ~d~~~~~~d~~lG~~~i~l~~~~~ 343 (475)
||++ +++||++.+++..+..
T Consensus 724 ~D~d----ddfiG~~~ipL~~L~~ 743 (816)
T 3qr0_A 724 SEEN----GKFIGHRVMPLDGIKP 743 (816)
T ss_dssp EETT----SCEEEEEEEESTTCCC
T ss_pred EecC----CCeeeEEEEEHHHcCC
Confidence 9985 7999999999866543
No 101
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.93 E-value=5.9e-09 Score=84.47 Aligned_cols=113 Identities=22% Similarity=0.331 Sum_probs=82.9
Q ss_pred CCEEEEEEEEeecCCCCC-CCCCCCcEEEEEEeCCC-CceEEe-eeecCCCCceeeeeEEeecccccccccceEEEEEEe
Q psy15955 115 NSTLILRVISAKELPAKD-MSGTSDPYVKVALLPDK-KHRLET-KIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFD 191 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~-~~~~~dpyv~v~l~~~~-~~~~kT-~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d 191 (475)
..-|+|.+.+..-.+... .....||||.|.+...- ....+| ..+++|..|+||+.|.-. +. ..+.|.|.|++
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~---V~--~Gr~l~i~Vfh 83 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAH---IN--KGRVMQIIVKG 83 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEEC---CC--SSCEEEEEEEC
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeee---EE--CCeEEEEEEEc
Confidence 345777776665544332 23368999999983210 012577 677889999999999865 33 35789999996
Q ss_pred eCCCCCCccccceeecccccc-----CCCCcceeeccCCCCCCcccceeeeeeec
Q psy15955 192 YDRFSRDDSIGEVFLPLCQVD-----LSEKPTFWKALKPPAKDKCGELLTSLCYH 241 (475)
Q Consensus 192 ~d~~~~~~~iG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~~~G~l~l~l~~~ 241 (475)
... +|++.++|++++|. .++..+.|++|+| .|+|++.+.|.
T Consensus 84 ~a~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-----~Gkl~v~i~~~ 129 (138)
T 2enj_A 84 KNV----DLISETTVELYSLAERCRKNNGKTEIWLELKP-----QGRMLMNARYF 129 (138)
T ss_dssp SSC----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-----SCEEEEEEEEC
T ss_pred CCC----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-----CcEEEEEEEEE
Confidence 543 89999999999997 4456689999986 59999999886
No 102
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.92 E-value=5.6e-09 Score=83.51 Aligned_cols=113 Identities=21% Similarity=0.348 Sum_probs=81.4
Q ss_pred CCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC-CceEEe-eeecCCCCceeeeeEEeecccccccccceEEEEEEee
Q psy15955 115 NSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK-KHRLET-KIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDY 192 (475)
Q Consensus 115 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~-~~~~kT-~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~ 192 (475)
..-|+|.+.++.--+.+......||||.|.+...- ....+| ..+++|..|+||+.|.-. +. ..+.|.|.|++.
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~---V~--~Gr~l~i~Vfh~ 79 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAH---IY--EGRVIQIVLMRA 79 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEE---CC--TTCEEEEEEEEE
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEee---ee--CCEEEEEEEEcC
Confidence 34577777655543322233468999999983110 012365 677889999999999866 33 356899999976
Q ss_pred CCCCCCccccceeecccccc-----CCCCcceeeccCCCCCCcccceeeeeeec
Q psy15955 193 DRFSRDDSIGEVFLPLCQVD-----LSEKPTFWKALKPPAKDKCGELLTSLCYH 241 (475)
Q Consensus 193 d~~~~~~~iG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~~~G~l~l~l~~~ 241 (475)
.. +|++.+++++++|. .++..+.|++|+| .|+|++.+.|.
T Consensus 80 a~----~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-----~Gkl~~~i~~~ 124 (126)
T 1yrk_A 80 AE----EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-----QAKVLMSVQYF 124 (126)
T ss_dssp TT----EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-----SCEEEEEEEEE
T ss_pred CC----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-----CcEEEEEEEEe
Confidence 53 89999999999997 4445579999986 59999998875
No 103
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.90 E-value=3.9e-09 Score=113.36 Aligned_cols=89 Identities=25% Similarity=0.345 Sum_probs=71.2
Q ss_pred ceeEEEEEEeeccCcccccCCCccceEEEEEEeCce-eeeeeecc-cccC-CCCCeecc-eEEE-eecccccccceEEEE
Q psy15955 244 NSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEK-RIEKRKTQ-IFKC-NLNPVFNE-SFSF-NVPWEKIRECSLNVM 318 (475)
Q Consensus 244 ~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~-~~~~~~T~-~~~~-t~nP~w~e-~f~f-~v~~~~l~~~~l~i~ 318 (475)
.+.|.|.|++|++|+. +++||||+|.+..... ...+++|+ ++++ +.||+||| +|.| .|..+++. .|.|.
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~--~Lr~~ 750 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELA--SLRVA 750 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGC--EEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCcc--EEEEE
Confidence 4579999999999985 4689999999864221 12356898 7764 69999999 7999 88767764 79999
Q ss_pred EEeccCCCCCeeeEEEEEcCcCCC
Q psy15955 319 VMDFDNIGRNELIGRILLAGKNGS 342 (475)
Q Consensus 319 V~d~~~~~~d~~lG~~~i~l~~~~ 342 (475)
|||++ +++||++.|++..+.
T Consensus 751 V~D~d----~d~iG~~~ipl~~L~ 770 (799)
T 2zkm_X 751 VMEEG----NKFLGHRIIPINALN 770 (799)
T ss_dssp EEETT----TEEEEEEEEEGGGBC
T ss_pred EEEeC----CCccceEeeehhhcC
Confidence 99986 799999999986554
No 104
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.88 E-value=4.5e-09 Score=112.98 Aligned_cols=88 Identities=22% Similarity=0.318 Sum_probs=70.3
Q ss_pred eeEEEEEEeeccCcccccCCCccceEEEEEEeCce-eeeeeecccccC-CCCCeecc-eEEEe-ecccccccceEEEEEE
Q psy15955 245 SVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEK-RIEKRKTQIFKC-NLNPVFNE-SFSFN-VPWEKIRECSLNVMVM 320 (475)
Q Consensus 245 ~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~-~~~~~~T~~~~~-t~nP~w~e-~f~f~-v~~~~l~~~~l~i~V~ 320 (475)
..|.|.|+.|++|+.. .+||||+|.+..... ...+++|+++++ +.||+||| +|.|. |...++ ..|.|+||
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pel--a~Lrf~V~ 798 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL--ASLRIAAF 798 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGG--CEEEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCc--CEEEEEEE
Confidence 4799999999999853 589999999864211 123478999976 59999999 69998 766665 37999999
Q ss_pred eccCCCCCeeeEEEEEcCcCCC
Q psy15955 321 DFDNIGRNELIGRILLAGKNGS 342 (475)
Q Consensus 321 d~~~~~~d~~lG~~~i~l~~~~ 342 (475)
|++ +++||++.|++..+.
T Consensus 799 D~d----ddfiG~~~lpL~~L~ 816 (885)
T 3ohm_B 799 EEG----GKFVGHRILPVSAIR 816 (885)
T ss_dssp ETT----TEEEEEEEEETTTCC
T ss_pred cCC----ccEEeeEEEEHHHcC
Confidence 987 799999999986554
No 105
>1cxq_A Avian sarcoma virus integrase; mixed beta-sheet surrounded by alpha-helices, transferase; HET: EPE; 1.02A {Avian sarcoma virus} SCOP: c.55.3.2 PDB: 1cxu_A* 1czb_A* 1cz9_A* 1asu_A* 1asw_A* 1asv_A 1a5v_A* 1a5w_A* 1a5x_A* 1vsf_A* 1vse_A* 3o4n_A* 1vsm_A 3o4q_A* 1vsd_A* 1vsh_A* 1vsi_A* 1vsj_A* 1vsk_A 1vsl_A
Probab=98.88 E-value=1.7e-10 Score=100.23 Aligned_cols=88 Identities=11% Similarity=0.056 Sum_probs=64.3
Q ss_pred ccCCCcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhccc----------cchHHHHHH
Q psy15955 354 ITKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCNW----------NNVDEELLN 423 (475)
Q Consensus 354 ~~~p~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~~----------~~~~~~l~~ 423 (475)
.+.|....++.+..+.+..|+.+|...|+.+..+.+++|+.||.+||++++++..+++... ..|.+.|+.
T Consensus 65 ~g~p~~i~sDnG~~f~s~~~~~~~~~~gi~~~~~~p~~p~~ng~~Er~~~tlk~~~~~~~~~~~~~~~l~~~~w~~~l~~ 144 (162)
T 1cxq_A 65 LGRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAK 144 (162)
T ss_dssp HCCCSEEECCSCHHHHSHHHHHHHHHHTCEEECCCCC----CHHHHHHHHHHHHHHHHHHHHTTCSSSCCHHHHHHHHHH
T ss_pred HCCCeEEEeCCchhhhhHHHHHHHHHCCCeEeeCCCCCCccCCEEehHHHHHHHHHHHHcCcccccccCCcchHHHHhhh
Confidence 3456677788888888889999999999999999999999999999999999998876532 459999999
Q ss_pred HHHHhcCccCCCCCCChh
Q psy15955 424 FSQSYNSTPHTTLGVSPA 441 (475)
Q Consensus 424 ~l~~y~~~~~~~~~~sP~ 441 (475)
++++||.+++.++|.|||
T Consensus 145 ~~~~~N~~~~~~~g~tp~ 162 (162)
T 1cxq_A 145 AMYALNHFERGENTKTNL 162 (162)
T ss_dssp HHHHHHC-----------
T ss_pred eeeeeeccccCCCCCCCC
Confidence 999999999999999997
No 106
>1c0m_A Protein (integrase); HIV, X-RAY crystallography, protein structure, transferase; 2.53A {Rous sarcoma virus} SCOP: b.34.7.1 c.55.3.2 PDB: 1c1a_A
Probab=98.74 E-value=3.3e-09 Score=98.23 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=86.7
Q ss_pred ccCCCcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhc----------cccchHHHHHH
Q psy15955 354 ITKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKC----------NWNNVDEELLN 423 (475)
Q Consensus 354 ~~~p~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~----------~~~~~~~~l~~ 423 (475)
.+.|....++.+..+.+..|..+|...|+.+..+.+++|+.||.+||++++++..+.+. ...+|.+.|..
T Consensus 64 ~g~p~~i~sDnG~~f~s~~~~~~~~~~gI~~~~~~p~~p~~ng~vEr~~~tlk~~~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (238)
T 1c0m_A 64 LGRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRVLAEGDGFMKRIPTSKQGELLAK 143 (238)
T ss_dssp HCCCSEEEECSCHHHHSHHHHHHHHHHTCEEEECCSSSSTTSHHHHHHHHHHHHHHHHHHHHTTCSSSCCGGGHHHHHHH
T ss_pred hCCCcEEEECCCCccccHHHHHHHHHCCCEEEecCCCCcccccHHHHHHHHHHHHHHHhcccccccccCCcHHHHHHHHH
Confidence 34566777888888889999999999999999999999999999999999999987762 23567789999
Q ss_pred HHHHhcCccCCCCCCChhhhhcCCccCcccc
Q psy15955 424 FSQSYNSTPHTTLGVSPAELHLGRKLKTTFD 454 (475)
Q Consensus 424 ~l~~y~~~~~~~~~~sP~~l~~gr~~~~~~~ 454 (475)
++..||++++...|.||+|+.+|+.+.+...
T Consensus 144 ~i~~yN~~r~~l~~~TP~e~~~~~~~~~~~~ 174 (238)
T 1c0m_A 144 AMYALNHKERGENTKTPIQKHWRPTVLTEGP 174 (238)
T ss_dssp HHHHHHSSCCSSCSSCHHHHHHSCBCCSSCC
T ss_pred HHHHHcCCCCCCCCCChHHHHhCccccccCC
Confidence 9999999987778999999999987655433
No 107
>1ex4_A Integrase; SH3-like domain, nonspecific DNA binding beta sheet, CIS-Pro viral protein; HET: CPS; 2.80A {Human immunodeficiency virus 1} SCOP: b.34.7.1 c.55.3.2 PDB: 1qmc_A 1ihv_A 1ihw_A
Probab=98.74 E-value=2e-09 Score=99.79 Aligned_cols=92 Identities=13% Similarity=0.095 Sum_probs=77.8
Q ss_pred CCcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhcc--ccchHHHHHHHHHHhcCccCC
Q psy15955 357 PRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCN--WNNVDEELLNFSQSYNSTPHT 434 (475)
Q Consensus 357 p~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~--~~~~~~~l~~~l~~y~~~~~~ 434 (475)
+....++.+.-+.+..|..+|...|+.+..+.+++|+.||.+||+|++++..+.+.. ...|...|..+++.||..||.
T Consensus 61 ~~~i~sDnG~eF~s~~~~~~~~~~gI~~~~s~p~~P~~NG~vEr~n~tlk~~l~~~~~~~~~~~~~l~~~~~~~n~~~~~ 140 (239)
T 1ex4_A 61 VKTIHTDNGSNFTGATVRAACDWAGIKQEDGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKRKG 140 (239)
T ss_dssp CCEEEECCCHHHHCHHHHHHHTTTTCEECCCCC---CSSHHHHHHHHHHHHHHHHHGGGCSSSHHHHHHHHHHHHHCCSS
T ss_pred CcEEEecCcHHHHHHHHHHHHHHCCCeEEECCCCCcccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCccC
Confidence 345667888888888899999999999999999999999999999999999886653 377999999999999999998
Q ss_pred CC-CCChhhhhcCCc
Q psy15955 435 TL-GVSPAELHLGRK 448 (475)
Q Consensus 435 ~~-~~sP~~l~~gr~ 448 (475)
.+ |.||+|+++|..
T Consensus 141 ~l~~~TP~e~~~~~~ 155 (239)
T 1ex4_A 141 GIGGYSAGERIVDII 155 (239)
T ss_dssp SSSCCCHHHHHHHHH
T ss_pred CCCCCCHHHHHhcCC
Confidence 87 599999999844
No 108
>3av9_A Integrase, IN; protein-protein interactions, HIV, recombination-inhibitor C; 1.70A {Human immunodeficiency virus type 1} PDB: 3ava_A 3avb_A 3avc_A 3avg_A 3avh_A 3avi_A 3avj_A 3avk_A 3avl_A 3avm_A 3avn_A 3nf6_A* 3nf7_A* 3nf8_A* 3nf9_A* 3nfa_A* 3avf_A
Probab=98.64 E-value=2e-09 Score=95.36 Aligned_cols=90 Identities=13% Similarity=0.099 Sum_probs=76.3
Q ss_pred CcceeeeeccCCCCcccceeecccceecccCCCCCCCCCchhhhhHHHHHHhhhcc--ccchHHHHHHHHHHhcCccCCC
Q psy15955 358 RQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVGVVKRFLRKCN--WNNVDEELLNFSQSYNSTPHTT 435 (475)
Q Consensus 358 ~~~~s~w~~L~~s~~f~~~~~~~g~~~~~~~~~~pqsnG~~er~~~~lk~~l~~~~--~~~~~~~l~~~l~~y~~~~~~~ 435 (475)
....++.+..+.+..|..+|...|+.+..+++++|+.||.+||++++++..+++.. ...|.+.|..+++.||..++..
T Consensus 82 ~~i~sDnG~ef~s~~~~~~~~~~gI~~~~s~p~~P~~nG~vEr~~~tlk~~l~~~~~~~~~~~~~l~~~~~~yN~~~~~~ 161 (183)
T 3av9_A 82 KTVHTDNGSNFTSTTVKAACWWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGG 161 (183)
T ss_dssp CEEECSSHHHHHCHHHHHHHHHHTCEEECCCCSSHHHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHCBCC-
T ss_pred cEEEecCchhcchHHHHHHHHHCCCEEeecCCCCCcchhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcCCCCC
Confidence 34456667777788899999999999999999999999999999999999987642 3779999999999999999877
Q ss_pred C-CCChhhhhcCC
Q psy15955 436 L-GVSPAELHLGR 447 (475)
Q Consensus 436 ~-~~sP~~l~~gr 447 (475)
+ |.||+|++++.
T Consensus 162 l~~~tP~e~~~~~ 174 (183)
T 3av9_A 162 IGGYSAGERIVDI 174 (183)
T ss_dssp ---CBHHHHHHHH
T ss_pred CCCCCHHHHHhcc
Confidence 7 79999999764
No 109
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.22 E-value=1.8e-05 Score=63.34 Aligned_cols=107 Identities=17% Similarity=0.226 Sum_probs=67.7
Q ss_pred eeEEEEEEeec--cCcccccCCCccceEEEEEEeCceeeeeeec-ccccCCCCCeecceEEEeecccccccceEEEEEEe
Q psy15955 245 SVLTITLLKAR--NLKAKDINGKSDPYVKVWLQFGEKRIEKRKT-QIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMD 321 (475)
Q Consensus 245 ~~L~v~v~~a~--~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T-~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d 321 (475)
..|+|.+.++. .|+. .....|||+.|.+..... ..+.+| ...++|..|.||++|.-.|.. ++.|.|.|++
T Consensus 6 ~flRi~~~~~~~~~~~~--~~~~lDPy~aV~vdE~~~-~e~g~t~~~K~kT~~P~Wne~Fd~~V~~----Gr~l~i~Vfh 78 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQA--EDEANQPFCAVKMKEALS-TERGKTLVQKKPTMYPEWKSTFDAHIYE----GRVIQIVLMR 78 (126)
T ss_dssp CEEEEEEEEEECSSCCC--SSSSCCCEEEEEEEEEEE-ETTEEEEECCSCCBCCCTTCEEEEECCT----TCEEEEEEEE
T ss_pred ccEEeeeccccccccCC--ccccCCceEEEEeeeeEE-cccceeecccCCCCCcCccceEEeeeeC----CEEEEEEEEc
Confidence 45666654443 3332 234689999997742111 112244 666789999999998888763 5689999997
Q ss_pred ccCCCCCeeeEEEEEcCcCCCCCcccccccccccCCCcceeeeeccCCCC
Q psy15955 322 FDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKPDH 371 (475)
Q Consensus 322 ~~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~p~~~~s~w~~L~~s~ 371 (475)
... +|++.|+|++.++.. -....+.....|..|.+.+
T Consensus 79 ~a~----~fvAn~tV~~edL~~---------~c~~~~g~~e~WvdLeP~G 115 (126)
T 1yrk_A 79 AAE----EPVSEVTVGVSVLAE---------RCKKNNGKAEFWLDLQPQA 115 (126)
T ss_dssp ETT----EEEEEEEEEHHHHHH---------HHHTTTTEEEEEEECBSSC
T ss_pred CCC----CeeeEEEEEHHHHHh---------hhccCCCceEEEEecccCc
Confidence 553 999999996633221 0001234667788887754
No 110
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.07 E-value=2.3e-05 Score=63.56 Aligned_cols=106 Identities=16% Similarity=0.226 Sum_probs=67.0
Q ss_pred eeEEEEEEeeccCcccc-cCCCccceEEEEEEeCceeeeeeec-ccccCCCCCeecceEEEeecccccccceEEEEEEec
Q psy15955 245 SVLTITLLKARNLKAKD-INGKSDPYVKVWLQFGEKRIEKRKT-QIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDF 322 (475)
Q Consensus 245 ~~L~v~v~~a~~L~~~~-~~~~~dpyv~v~l~~~~~~~~~~~T-~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~ 322 (475)
..|+|.+.+..--+... .....|||+.|.+...- ...+.+| ...++|..|.||++|.-.|. ..+.|.|.|++.
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~-~te~gqtl~~KkkT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh~ 84 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYV-ESENGQMYIQKKPTMYPPWDSTFDAHIN----KGRVMQIIVKGK 84 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEE-EETTEEEEEEEEEEECCCSSSEEEECCC----SSCEEEEEEECS
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeee-eccCceeecccCCCCCccccceEeeeEE----CCeEEEEEEEcC
Confidence 45666654444322221 12357999999774221 1112345 55667899999999887776 356899999965
Q ss_pred cCCCCCeeeEEEEEcCcCCCCCcccccccccccC---CCcceeeeeccCCCC
Q psy15955 323 DNIGRNELIGRILLAGKNGSGASETKHWQDMITK---PRQTIVQWHRLKPDH 371 (475)
Q Consensus 323 ~~~~~d~~lG~~~i~l~~~~~~~~~~~w~~~~~~---p~~~~s~w~~L~~s~ 371 (475)
.. +|+..|+|++.+ +... .+.....|..|.+.+
T Consensus 85 a~----~fVAn~tV~~ed------------L~~~ck~~~g~~e~WvdLeP~G 120 (138)
T 2enj_A 85 NV----DLISETTVELYS------------LAERCRKNNGKTEIWLELKPQG 120 (138)
T ss_dssp SC----SCCEEEEEESHH------------HHHHHHHTTTCEEEEEECBSSC
T ss_pred CC----CeeeEEEEEHHH------------HHhhhccCCCceEEEEecccCc
Confidence 43 899999997643 2221 234567787787754
No 111
>1bco_A MUA domain II, bacteriophage MU transposase; polynucleotidyl transferase, DNA binding, endonuclease, integrase; 2.40A {Enterobacteria phage MU} SCOP: b.48.1.1 c.55.3.3 PDB: 1bcm_A
Probab=96.73 E-value=0.00057 Score=65.85 Aligned_cols=89 Identities=11% Similarity=0.095 Sum_probs=68.5
Q ss_pred CCC--cceeeeeccCCCCcc-------------c----ceeecccceecccCCC----CCCCCCchhhhh--HHHHHHhh
Q psy15955 356 KPR--QTIVQWHRLKPDHEM-------------Q----TFLQSVGVSHIRIPTY----HPASNGAAENMV--GVVKRFLR 410 (475)
Q Consensus 356 ~p~--~~~s~w~~L~~s~~f-------------~----~~~~~~g~~~~~~~~~----~pqsnG~~er~~--~~lk~~l~ 410 (475)
.|. ...++.+..+.+..+ + .+|..+||.+..+.++ +|+.|| +||++ ++++..+.
T Consensus 80 ~P~~~~i~sDnG~~f~s~~~~g~~~~~~~~~~~~~~~~~~~~~lgI~~~~~~p~~~~g~p~~kg-iEr~f~~~tlk~~~~ 158 (327)
T 1bco_A 80 IPEDFHITIDNTRGAANKWLTGGAPNRYRFKVKEDDPKGLFLLMGAKMHWTSVVAGKGWGQAKP-VERAFGVGGLEEYVD 158 (327)
T ss_dssp EESSCEEECCCTTSTTTTTTSCCCTTTTBSCBCCCCHHHHHHHHTCEEECSSSCTTCCCCCSSC-SSGGGSGGGGGGTTT
T ss_pred CCCCcEEEeeCchhhccccccccccccccccccccchhhHHHhcCeEEEecCcccCCCCCCccc-eeeeeccCcHhHHhc
Confidence 355 566777777766666 2 5889999999999999 999999 99999 99998774
Q ss_pred hcc------------------------ccchHHHHHHHHHHhcCccCCCC----CC-Chhhhhc
Q psy15955 411 KCN------------------------WNNVDEELLNFSQSYNSTPHTTL----GV-SPAELHL 445 (475)
Q Consensus 411 ~~~------------------------~~~~~~~l~~~l~~y~~~~~~~~----~~-sP~~l~~ 445 (475)
+.. ..+....|..++..||..||..+ |. ||.|++-
T Consensus 159 ~~~~~~g~~~g~~~~~~~~~~~~~~~t~~e~~~~l~~~i~~YN~r~h~~l~~~~g~~tP~e~~~ 222 (327)
T 1bco_A 159 KHPALAGAYTGPNPQAKPDNYGDRAVDAELFLKTLAEGVAMFNARTGRETEMCGGKLSFDDVFE 222 (327)
T ss_dssp TCGGGTTTBCCC--------CTTTCEEHHHHHHHHHHHHHHHHHCCCCCSTTTTTTCCHHHHHH
T ss_pred cCCccccccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHhCCCCccccccCCCCCHHHHHH
Confidence 331 13345667778888999999863 64 9999875
No 112
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=94.32 E-value=0.24 Score=53.87 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=70.0
Q ss_pred CceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeee-eeecccccCCCCCeecceEEEeecccccc-cceEEEEEE
Q psy15955 243 SNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIE-KRKTQIFKCNLNPVFNESFSFNVPWEKIR-ECSLNVMVM 320 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~-~~~T~~~~~t~nP~w~e~f~f~v~~~~l~-~~~l~i~V~ 320 (475)
-...+.|.|..+.++... ...+-||.+.+..+++... ...|..+....+|.|||.+.|++...+|. ++.|.|+||
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 456899999999998654 3468899998877776553 23455555577899999999998777764 567999999
Q ss_pred eccCC--C----------CCeeeEEEEEcCcCCC
Q psy15955 321 DFDNI--G----------RNELIGRILLAGKNGS 342 (475)
Q Consensus 321 d~~~~--~----------~d~~lG~~~i~l~~~~ 342 (475)
+.... + .+..||.+.+++.+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCc
Confidence 96432 1 2469999999987643
No 113
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=94.07 E-value=0.26 Score=54.05 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=68.7
Q ss_pred CceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeee-eecccccCCCCCeecceEEEeecccccc-cceEEEEEE
Q psy15955 243 SNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEK-RKTQIFKCNLNPVFNESFSFNVPWEKIR-ECSLNVMVM 320 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~-~~T~~~~~t~nP~w~e~f~f~v~~~~l~-~~~l~i~V~ 320 (475)
....+.|+|..+.++.... ....+-||++.+..+++.... ..|.. ....+|.|||.+.|++...+|. .+.|.|+||
T Consensus 353 ~~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred CCCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccc-cCCCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 3568899999998876432 334688999999877765533 33443 3356788999999998777765 467999999
Q ss_pred eccCC----CCCeeeEEEEEcCcCC
Q psy15955 321 DFDNI----GRNELIGRILLAGKNG 341 (475)
Q Consensus 321 d~~~~----~~d~~lG~~~i~l~~~ 341 (475)
+.... ..+..||.+.+++.+.
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCT
T ss_pred EecCccCcccccceeEEeeeeeEcc
Confidence 86642 1346899999998764
No 114
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=94.06 E-value=0.34 Score=42.84 Aligned_cols=43 Identities=21% Similarity=0.371 Sum_probs=37.3
Q ss_pred ceEEeeeecCCCCceeeeeEEeecccccccccceEEEEEEeeCC
Q psy15955 151 HRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDR 194 (475)
Q Consensus 151 ~~~kT~v~~~~~nP~w~e~f~f~~~~~~~~~~~~L~~~V~d~d~ 194 (475)
..++|.|...+.+|.|+|++.+. +|.+.....-|.|++++...
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~-LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVA-IPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEE-ECTTSSTTEEEEEEEEECCC
T ss_pred eeEEEEEEEcCCCCCceEeEEEe-eChhhcCCeEEEEEEEEecc
Confidence 35788899999999999999999 88888888899999987653
No 115
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=93.89 E-value=0.85 Score=40.30 Aligned_cols=58 Identities=14% Similarity=0.214 Sum_probs=46.1
Q ss_pred eeeeecccccCCCCCeecceEEEeecccccccceEEEEEEeccCCC----CCeeeEEEEEcC
Q psy15955 281 IEKRKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIG----RNELIGRILLAG 338 (475)
Q Consensus 281 ~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~~~~l~i~V~d~~~~~----~d~~lG~~~i~l 338 (475)
...++|.+...+.+|.|+|++.+.+|.+.....-|.|++++..... .+..+|-+.++|
T Consensus 76 ~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL 137 (220)
T 3l4c_A 76 ISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKL 137 (220)
T ss_dssp BSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEES
T ss_pred ceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEc
Confidence 3456888888899999999999999999888888999998765421 124678877766
No 116
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=93.86 E-value=0.33 Score=52.83 Aligned_cols=99 Identities=12% Similarity=0.142 Sum_probs=69.4
Q ss_pred CceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeecccccc-cceEEEEEEe
Q psy15955 243 SNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKIR-ECSLNVMVMD 321 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l~-~~~l~i~V~d 321 (475)
-...+.|.|..+...... .+...+.||++.+..+++.....+|..+.-+.+|.|||.+.|++...+|. ++.|.|+||+
T Consensus 216 ~~~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 294 (961)
T 1e7u_A 216 CDRKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYC 294 (961)
T ss_dssp CCSEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred ccCceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEe
Confidence 345788888877642211 12346889999888888776666666655667899999999998777764 5679999998
Q ss_pred ccCC----------------CCCeeeEEEEEcCcCCC
Q psy15955 322 FDNI----------------GRNELIGRILLAGKNGS 342 (475)
Q Consensus 322 ~~~~----------------~~d~~lG~~~i~l~~~~ 342 (475)
.... ++...||.+.+++.+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 295 GAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EEC--------------------CEEEEEEEESBCTT
T ss_pred cccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 5432 13458999999887643
No 117
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=90.61 E-value=0.36 Score=53.13 Aligned_cols=96 Identities=15% Similarity=0.122 Sum_probs=67.8
Q ss_pred CceeEEEEEEeeccCcccccCCCccceEEEEEEeCceeee-eeecccccCCCCCeecceEEEeecccccc-cceEEEEEE
Q psy15955 243 SNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIE-KRKTQIFKCNLNPVFNESFSFNVPWEKIR-ECSLNVMVM 320 (475)
Q Consensus 243 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~-~~~T~~~~~t~nP~w~e~f~f~v~~~~l~-~~~l~i~V~ 320 (475)
-...+.|.|..+.++... ...+-||.+.+..+++... ...|..+....+|.|||.+.|++...+|. ++.|.|+||
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 356899999999998654 3568999988877776553 23455555577899999999998777765 567999999
Q ss_pred eccCC----------------------CCCeeeEEEEEcCcCC
Q psy15955 321 DFDNI----------------------GRNELIGRILLAGKNG 341 (475)
Q Consensus 321 d~~~~----------------------~~d~~lG~~~i~l~~~ 341 (475)
+.... +.+..||.+.+++.+.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 428 AVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CC------------------------------CCEEEEESBCT
T ss_pred EecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 86311 1134899999988763
No 118
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=90.31 E-value=0.87 Score=49.50 Aligned_cols=95 Identities=15% Similarity=0.204 Sum_probs=63.9
Q ss_pred CCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCc---eEEeeeecCCCCceeeeeEEeeccccccc-ccceEEEE
Q psy15955 113 FDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKH---RLETKIKRRTLNPRWNETLYFEGFPIQKL-QSRVLHLH 188 (475)
Q Consensus 113 ~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~---~~kT~v~~~~~nP~w~e~f~f~~~~~~~~-~~~~L~~~ 188 (475)
.-...+.|+|.++.++... ..++-||.+.+.-++.. ...|..+.-..+|.|||...|. +...++ ....|.|+
T Consensus 214 ~~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~-i~i~dLPr~a~L~~t 289 (940)
T 2wxf_A 214 SLEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFD-ISVCDLPRMARLCFA 289 (940)
T ss_dssp TCCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEE-EEGGGCCTTCEEEEE
T ss_pred hcCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcc-cccccCCcccEEEEE
Confidence 3567899999999999754 34678888887533321 2345555556789999999998 666555 56789999
Q ss_pred EEeeCCC--C----------CCccccceeeccccc
Q psy15955 189 VFDYDRF--S----------RDDSIGEVFLPLCQV 211 (475)
Q Consensus 189 V~d~d~~--~----------~~~~iG~~~i~l~~l 211 (475)
||+.... + .+..||.+.++|-+-
T Consensus 290 i~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 290 LYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEEC----------------CEEEEEEEEESBCT
T ss_pred EEEecCCccCccccccccccccceEEEEeeeEECC
Confidence 9997431 1 134677777777553
No 119
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=87.37 E-value=1.1 Score=37.34 Aligned_cols=123 Identities=13% Similarity=0.118 Sum_probs=75.9
Q ss_pred CCCEEEEEEEEeecCCCCC--CCCCCCcEEEEEEeCCCCceEEeeeecCCCCceeeeeEEeecccccc-----cccceEE
Q psy15955 114 DNSTLILRVISAKELPAKD--MSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQK-----LQSRVLH 186 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~~~--~~~~~dpyv~v~l~~~~~~~~kT~v~~~~~nP~w~e~f~f~~~~~~~-----~~~~~L~ 186 (475)
..+.+.|+|.++. +.+.. ..+..+|..-+.+.=-+-+...|.++. +.+|.||-+-.|. +.+.+ ++...|.
T Consensus 16 gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~-V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 16 GENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYL-VHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEE-ECCSHHHHHHHHHCCEE
T ss_pred CCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEE-EEeCHHHHHHHhcCCEE
Confidence 4567888888776 32211 112345655555421244455666666 8899999887776 44433 3346799
Q ss_pred EEEEeeCCCCCCccccceeeccccccCCCC-cceeeccCCCCC--Ccccceeeeeee
Q psy15955 187 LHVFDYDRFSRDDSIGEVFLPLCQVDLSEK-PTFWKALKPPAK--DKCGELLTSLCY 240 (475)
Q Consensus 187 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~-~~~~~~L~~~~~--~~~G~l~l~l~~ 240 (475)
++++.... ..-..||.+.|+|.++..... .....+|....+ ..-|.|.+.++.
T Consensus 93 lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL 148 (156)
T 2yrb_A 93 LEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRL 148 (156)
T ss_dssp EEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEE
T ss_pred EEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEE
Confidence 99998753 345789999999999875533 234456655444 345666665554
No 120
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=86.76 E-value=3 Score=45.78 Aligned_cols=95 Identities=20% Similarity=0.272 Sum_probs=64.7
Q ss_pred CCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCc---eEEeeeecCCCCceeeeeEEeeccccccc-ccceEEEEE
Q psy15955 114 DNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKH---RLETKIKRRTLNPRWNETLYFEGFPIQKL-QSRVLHLHV 189 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~---~~kT~v~~~~~nP~w~e~f~f~~~~~~~~-~~~~L~~~V 189 (475)
-...+.|+|+++.++.... ....+-||.+.+.-++.. ..+|+.+. ..+|.|||...|. +.+.++ ..+.|.|+|
T Consensus 353 ~~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~-i~i~dLPr~arL~~tl 429 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYD-IYIPDLPRAARLCLSI 429 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEE-EEGGGCCTTCEEEEEE
T ss_pred CCCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEec-CccccCChhcEEEEEE
Confidence 4668999999998887433 334678999998644332 23344333 4578899999998 666655 457899999
Q ss_pred EeeCCC----CCCccccceeeccccc
Q psy15955 190 FDYDRF----SRDDSIGEVFLPLCQV 211 (475)
Q Consensus 190 ~d~d~~----~~~~~iG~~~i~l~~l 211 (475)
|+.... +.+..||.+.++|-+.
T Consensus 430 ~~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 430 CSVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCCCC-------CCEEEEEESBCT
T ss_pred EEecCccCcccccceeEEeeeeeEcc
Confidence 987642 1245788888888664
No 121
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=81.76 E-value=4.2 Score=44.27 Aligned_cols=78 Identities=15% Similarity=0.169 Sum_probs=51.3
Q ss_pred CCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCce--EEeeeecCCCCceeeeeEEeeccccccc-ccceEEEEEE
Q psy15955 114 DNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHR--LETKIKRRTLNPRWNETLYFEGFPIQKL-QSRVLHLHVF 190 (475)
Q Consensus 114 ~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~--~kT~v~~~~~nP~w~e~f~f~~~~~~~~-~~~~L~~~V~ 190 (475)
-...+.|+|+.+....... ...++-||.+.+.-++..- .+|..+.-+.+|.|||.+.|. +...++ ....|.|+||
T Consensus 216 ~~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~-i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 216 CDRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFS-IKIKDLPKGALLNLQIY 293 (961)
T ss_dssp CCSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEE-EEGGGCCTTCEEEEEEE
T ss_pred ccCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEec-cccccCCcccEEEEEEE
Confidence 4567999999886522111 2346788888775333222 244444446679999999997 555554 5678999999
Q ss_pred eeC
Q psy15955 191 DYD 193 (475)
Q Consensus 191 d~d 193 (475)
+..
T Consensus 294 ~~~ 296 (961)
T 1e7u_A 294 CGA 296 (961)
T ss_dssp EEE
T ss_pred ecc
Confidence 864
No 122
>4fcy_A Transposase; rnaseh, DDE transposase, DNA binding protein-DNA complex; HET: DNA; 3.71A {Enterobacteria phage MU} PDB: 2ezk_A 2ezl_A 2ezh_A 2ezi_A
Probab=79.01 E-value=0.75 Score=46.94 Aligned_cols=74 Identities=11% Similarity=-0.002 Sum_probs=34.3
Q ss_pred cccceeecccceecccCCCCCCCCCc---hhhhhHHHHHH-h-h---hc----cc-----------------cchHHHHH
Q psy15955 372 EMQTFLQSVGVSHIRIPTYHPASNGA---AENMVGVVKRF-L-R---KC----NW-----------------NNVDEELL 422 (475)
Q Consensus 372 ~f~~~~~~~g~~~~~~~~~~pqsnG~---~er~~~~lk~~-l-~---~~----~~-----------------~~~~~~l~ 422 (475)
.+..+|..+||......++.|+.+|+ +||+++++... + . .. .+ ......|.
T Consensus 286 ~~~~~~~~lGI~~~~~~~~~p~~kg~~k~IER~F~t~~~~~~~~~~~~~~~~~tg~~~~~r~~~~~~~~~t~~e~~~~l~ 365 (529)
T 4fcy_A 286 DPKGLFLLMGAKMHWTSVVAGKGWGQAKPVERAFGVGGLEEYVDKHPALAGAYTGPNPQAKPDNYGDRAVDAELFLKTLA 365 (529)
T ss_dssp CHHHHHHHTTEEEEC-----------------------CTTTTTTCGGGTTTCCCSCSSCCGGGHHHHCEEHHHHHHHHH
T ss_pred hHHHHHHHcCCeEEecCCCCCCCCCCcCceehhhhhHhHHHHHHhccccCCcccCCCccccccchhhhcCCHHHHHHHHH
Confidence 44567899999999999999999985 99999987521 1 1 11 00 12334566
Q ss_pred HHHHHhcCccCCCC-----CCChhhhhc
Q psy15955 423 NFSQSYNSTPHTTL-----GVSPAELHL 445 (475)
Q Consensus 423 ~~l~~y~~~~~~~~-----~~sP~~l~~ 445 (475)
.+...||+++|..+ +.||.+++-
T Consensus 366 ~~i~~yn~~~h~~~~~~~~~~tP~~~w~ 393 (529)
T 4fcy_A 366 EGVAMFNARTGRETEMCGGKLSFDDVFE 393 (529)
T ss_dssp HHHHHHHHCCCCCSTTTTTTSCHHHHHH
T ss_pred HHHHHHhcCccccCCCCCCCCCHHHHHH
Confidence 66778998887654 679998763
No 123
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=77.10 E-value=1.4 Score=48.67 Aligned_cols=77 Identities=18% Similarity=0.263 Sum_probs=54.2
Q ss_pred CCCCEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCCc---eEEeeeecCCCCceeeeeEEeeccccccc-ccceEEEE
Q psy15955 113 FDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKH---RLETKIKRRTLNPRWNETLYFEGFPIQKL-QSRVLHLH 188 (475)
Q Consensus 113 ~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~---~~kT~v~~~~~nP~w~e~f~f~~~~~~~~-~~~~L~~~ 188 (475)
.-...+.|+|.++.++... ...+-||.+.+.-++.. ...|..+.-..+|.|||.+.|. +...++ ....|.|+
T Consensus 350 ~~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~-i~~~dLPr~a~L~~t 425 (1092)
T 2y3a_A 350 DNNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFD-INICDLPRMARLCFA 425 (1092)
T ss_dssp CCCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEE-EESSSCCTTCEEEEE
T ss_pred hcCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeC-CccccCChhcEEEEE
Confidence 3567899999999998754 34678888776433321 1245555556789999999998 566555 46789999
Q ss_pred EEeeC
Q psy15955 189 VFDYD 193 (475)
Q Consensus 189 V~d~d 193 (475)
||+..
T Consensus 426 i~~~~ 430 (1092)
T 2y3a_A 426 VYAVL 430 (1092)
T ss_dssp CCCC-
T ss_pred EEEec
Confidence 99863
No 124
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=63.97 E-value=40 Score=27.83 Aligned_cols=98 Identities=15% Similarity=0.223 Sum_probs=64.2
Q ss_pred eeecCCceeEEEEEEeeccCcccc--cCCCccceEEEEEEeCceeeeeeecccccCCCCCeecceEEEeeccccc-----
Q psy15955 238 LCYHPSNSVLTITLLKARNLKAKD--INGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVPWEKI----- 310 (475)
Q Consensus 238 l~~~~~~~~L~v~v~~a~~L~~~~--~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~l----- 310 (475)
....+..+.+.+.|.++. +.+.. ..+..+|..-+.+..-+- +.+.|.+.. ..+|.+|-+-.|.|...++
T Consensus 11 ~~l~~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~df--Etq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL 86 (156)
T 2yrb_A 11 IHLERGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDF--ELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYI 86 (156)
T ss_dssp SSCCSSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTC--CCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHH
T ss_pred hhccCCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEece--Eeeeccccc-CCCCCcceEEEEEEEeCHHHHHHH
Confidence 344566778888887776 22211 123357777766644332 334666665 7899999998998865543
Q ss_pred ccceEEEEEEeccCCCCCeeeEEEEEcCcC
Q psy15955 311 RECSLNVMVMDFDNIGRNELIGRILLAGKN 340 (475)
Q Consensus 311 ~~~~l~i~V~d~~~~~~d~~lG~~~i~l~~ 340 (475)
....|.|++..... +....||.+.|++.+
T Consensus 87 ~~~~l~lELhqa~g-~~~~tla~~~I~l~~ 115 (156)
T 2yrb_A 87 QKNTITLEVHQAYS-TEYETIAACQLKFHE 115 (156)
T ss_dssp HHCCEEEEEEEECS-SCEEEEEEEEECCSH
T ss_pred hcCCEEEEEEEeeC-CCceEEEEEEEEhHH
Confidence 34678888887643 346799999997743
No 125
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=49.89 E-value=1e+02 Score=25.18 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=56.6
Q ss_pred eeeecCCceeEEEEEEeeccCcccccCCCccceEEEEEEeCce-ee-eeeecccccC--CCCCeecceEEEeecccccc-
Q psy15955 237 SLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEK-RI-EKRKTQIFKC--NLNPVFNESFSFNVPWEKIR- 311 (475)
Q Consensus 237 ~l~~~~~~~~L~v~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~-~~-~~~~T~~~~~--t~nP~w~e~f~f~v~~~~l~- 311 (475)
..-..|....|.|.|-.- ++... ..-.|||+.|++.+..+ .+ ..+.|.+... +..=.|+..++...+.+.+.
T Consensus 6 ~~~~~pg~t~l~v~Ie~i-glkda--~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~ 82 (152)
T 2qzq_A 6 RLPSEPGMTLLTLTIEKI-GLKDA--GQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPK 82 (152)
T ss_dssp CCCCCTTCCEEEEEEEEE-ECTTG--GGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCT
T ss_pred CCCCCCCCeEEEEEEEEE-EeCCH--HHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCC
Confidence 333445566777775444 66543 34579999999865433 22 2455665422 12234666655555666664
Q ss_pred cceEEEEEEeccCCCCC-eeeEEEEEcCc
Q psy15955 312 ECSLNVMVMDFDNIGRN-ELIGRILLAGK 339 (475)
Q Consensus 312 ~~~l~i~V~d~~~~~~d-~~lG~~~i~l~ 339 (475)
++.|.+++.++....+. ...+.+.+.++
T Consensus 83 G~aivfElkH~k~kkkk~S~kCw~f~~~d 111 (152)
T 2qzq_A 83 GAAIFFEFKHYKPKKRFTSTKCFAFMEMD 111 (152)
T ss_dssp TCEEEEEEEEEETTTTEEEEEEEEEEEGG
T ss_pred CcEEEEEEEEecccceeeeeeeEEEEEhh
Confidence 45688888887654322 24455555443
Done!