RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15955
         (475 letters)



>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus)
           [TaxId: 10116]}
          Length = 138

 Score =  144 bits (365), Expect = 2e-42
 Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 2/136 (1%)

Query: 232 GELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKC 291
           GELL SLCY  + + LT+ +LKAR+L   D++G SDPYVKV L   +KRI K+KT + KC
Sbjct: 2   GELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC 61

Query: 292 NLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQ 351
             N VFNE F F++P E + E S+  +V+D +   RNE+IGR++L G    G S   HW+
Sbjct: 62  TPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVL-GATAEG-SGGGHWK 119

Query: 352 DMITKPRQTIVQWHRL 367
           ++   PR+ I +WH L
Sbjct: 120 EICDFPRRQIAKWHML 135



 Score =  109 bits (274), Expect = 3e-29
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 103 GQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKH--RLETKIKRR 160
           G++  SL Y    +TL + V+ A+ LP  D+SG SDPYVKV L   KK   + +T +K+ 
Sbjct: 2   GELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC 61

Query: 161 TLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFW 220
           T N  +NE   F+  P + L+   +   V D +R SR++ IG + L       S    + 
Sbjct: 62  TPNAVFNELFVFD-IPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEG-SGGGHWK 119

Query: 221 KALKPPAK 228
           +    P +
Sbjct: 120 EICDFPRR 127


>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus)
           [TaxId: 10116]}
          Length = 157

 Score =  139 bits (350), Expect = 6e-40
 Identities = 67/145 (46%), Positives = 101/145 (69%), Gaps = 2/145 (1%)

Query: 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQI 288
           +K G++  SL Y P+   LT+ +L+A+NLK  D+ G SDPYVK+ L    KR++K+KT I
Sbjct: 9   EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTI 68

Query: 289 FKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETK 348
            K  LNP +NESFSF VP+E+I++  + V V+D+D IG+N+ IG++ + G N +G +E +
Sbjct: 69  KKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFV-GYNSTG-AELR 126

Query: 349 HWQDMITKPRQTIVQWHRLKPDHEM 373
           HW DM+  PR+ I QWH L+ + E+
Sbjct: 127 HWSDMLANPRRPIAQWHTLQVEEEV 151



 Score =  102 bits (255), Expect = 2e-26
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 15/143 (10%)

Query: 100 ENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRL--ETKI 157
           E +G I FSL Y      L + ++ AK L   D+ G SDPYVK+ L+ + K     +T I
Sbjct: 9   EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTI 68

Query: 158 KRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQV------ 211
           K+ TLNP +NE+  FE  P +++Q   + + V DYD+  ++D+IG+VF+           
Sbjct: 69  KKNTLNPYYNESFSFE-VPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRH 127

Query: 212 --DLSEKP----TFWKALKPPAK 228
             D+   P      W  L+   +
Sbjct: 128 WSDMLANPRRPIAQWHTLQVEEE 150


>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus)
           [TaxId: 10116]}
          Length = 143

 Score =  134 bits (339), Expect = 1e-38
 Identities = 64/140 (45%), Positives = 92/140 (65%), Gaps = 3/140 (2%)

Query: 87  SLVDMYIDNTEP--SENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVA 144
            ++D  ++  EP   E +G++ +SL+YDF N+ L++ +I A ELPA DM GTSDPYVKV 
Sbjct: 3   GILDSMVEKEEPKEEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVF 62

Query: 145 LLPDKKHRLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEV 204
           LLPDKK + ETK+ R+TLNP +NE   F+  P  +L  + L + V+D+DRFS+ D IGE 
Sbjct: 63  LLPDKKKKFETKVHRKTLNPVFNEQFTFK-VPYSELGGKTLVMAVYDFDRFSKHDIIGEF 121

Query: 205 FLPLCQVDLSEKPTFWKALK 224
            +P+  VD       W+ L+
Sbjct: 122 KVPMNTVDFGHVTEEWRDLQ 141



 Score =  112 bits (280), Expect = 4e-30
 Identities = 46/130 (35%), Positives = 77/130 (59%), Gaps = 2/130 (1%)

Query: 224 KPPAKDKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEK 283
           +P  ++K G+L  SL Y   N+ L + +++A  L A D+ G SDPYVKV+L   +K+  K
Sbjct: 13  EPKEEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKK--K 70

Query: 284 RKTQIFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSG 343
            +T++ +  LNPVFNE F+F VP+ ++   +L + V DFD   ++++IG   +       
Sbjct: 71  FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF 130

Query: 344 ASETKHWQDM 353
              T+ W+D+
Sbjct: 131 GHVTEEWRDL 140


>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus
           norvegicus) [TaxId: 10116]}
          Length = 145

 Score =  133 bits (335), Expect = 7e-38
 Identities = 61/142 (42%), Positives = 87/142 (61%), Gaps = 1/142 (0%)

Query: 228 KDKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQ 287
           K   GEL  SLCY P+  +LT+T++KA NLKA D+ G SDPYVK  L    +R++KRKT 
Sbjct: 3   KADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTS 62

Query: 288 IFKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASET 347
           I K  LNP +NE+  F+V  E +    L++ V+D+D IG NE+IG   + G   +     
Sbjct: 63  IKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRV-GPEAADPHGR 121

Query: 348 KHWQDMITKPRQTIVQWHRLKP 369
           +HW +M+  PR+ +  WH+L  
Sbjct: 122 EHWAEMLANPRKPVEHWHQLVE 143



 Score = 98.7 bits (245), Expect = 3e-25
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 3/132 (2%)

Query: 99  SENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKH--RLETK 156
             ++G+++FSL Y      L + +I A  L A D++G SDPYVK +L+ + +   + +T 
Sbjct: 3   KADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTS 62

Query: 157 IKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEK 216
           IK+ TLNP +NE L F+    + +++  L + V DYD    ++ IG   +     D   +
Sbjct: 63  IKKNTLNPTYNEALVFD-VAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGR 121

Query: 217 PTFWKALKPPAK 228
             + + L  P K
Sbjct: 122 EHWAEMLANPRK 133


>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus
           norvegicus) [TaxId: 10116]}
          Length = 137

 Score =  127 bits (320), Expect = 8e-36
 Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 2/137 (1%)

Query: 232 GELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKC 291
           G++L SL Y      L + +++  +L A D NG SDP+VK+WL+    +  K KTQI K 
Sbjct: 2   GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK 61

Query: 292 NLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQ 351
            LNP FNE F +++    + + SL++ V D+D    N+ IG   L           KHW 
Sbjct: 62  TLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWY 119

Query: 352 DMITKPRQTIVQWHRLK 368
           + +    + I +WH+L+
Sbjct: 120 ECLKNKDKKIERWHQLQ 136



 Score = 99.1 bits (246), Expect = 2e-25
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 103 GQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKH--RLETKIKRR 160
           G+I  SL Y      LI+ +I    L A D +G SDP+VK+ L PD     + +T+IK++
Sbjct: 2   GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK 61

Query: 161 TLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFW 220
           TLNP +NE  +++      L  + L + V+DYD    +D IG   L +      E+   W
Sbjct: 62  TLNPEFNEEFFYD-IKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGIS--AKGERLKHW 118

Query: 221 KALKP 225
                
Sbjct: 119 YECLK 123


>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis
           protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 125

 Score =  125 bits (316), Expect = 2e-35
 Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 5/126 (3%)

Query: 103 GQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK--KHRLETKIKRR 160
           GQ+   L +D     LI+ ++ AK+LP+++     +PYVK+  LPD+  K++  TK  ++
Sbjct: 1   GQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK 60

Query: 161 TLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFS--RDDSIGEVFLPLCQVDLSEKPT 218
           TL P+WN+T  +     ++ + R+L + ++D  R      + +GE+ + L    L ++P 
Sbjct: 61  TLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDDEPH 120

Query: 219 FWKALK 224
            W  L+
Sbjct: 121 -WYKLQ 125



 Score =  104 bits (259), Expect = 3e-27
 Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 4/122 (3%)

Query: 232 GELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKC 291
           G+L   L +      L +T+L A++L +++     +PYVK++         KR+T+  K 
Sbjct: 1   GQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK 60

Query: 292 NLNPVFNESFSFN-VPWEKIRECSLNVMVMDFDNIG--RNELIGRILLAGKNGSGASETK 348
            L P +N++F ++ V   + RE  L + + D   +    +E +G IL+     +   +  
Sbjct: 61  TLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILI-ELETALLDDEP 119

Query: 349 HW 350
           HW
Sbjct: 120 HW 121


>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 138

 Score =  121 bits (305), Expect = 1e-33
 Identities = 54/127 (42%), Positives = 83/127 (65%), Gaps = 1/127 (0%)

Query: 96  TEPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKD-MSGTSDPYVKVALLPDKKHRLE 154
           +  S  +G + FSLEY+F+    ++ +  A+ LPA D  S TSDPY+K+ +LP+KKH+++
Sbjct: 2   SSGSSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVK 61

Query: 155 TKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLS 214
           T++ R+TL+P ++ET  F G P  ++Q   LH  +  +DRFSRDD IGEV +PL  ++LS
Sbjct: 62  TRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121

Query: 215 EKPTFWK 221
           E      
Sbjct: 122 EGKMLMN 128



 Score = 89.4 bits (221), Expect = 7e-22
 Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 5/131 (3%)

Query: 230 KCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGK-SDPYVKVWLQFGEKRIEKRKTQI 288
             G L  SL Y+       + + +AR L A D     SDPY+K+ +   +K   K KT++
Sbjct: 7   GLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKH--KVKTRV 64

Query: 289 FKCNLNPVFNESFS-FNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLA-GKNGSGASE 346
            +  L+P F+E+F+ + +P+ +I+E +L+  ++ FD   R+++IG +L+          +
Sbjct: 65  LRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGK 124

Query: 347 TKHWQDMITKP 357
               +++I+ P
Sbjct: 125 MLMNREIISGP 135


>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId:
           10116]}
          Length = 142

 Score =  108 bits (271), Expect = 7e-29
 Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 13/134 (9%)

Query: 103 GQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDK-----------KH 151
           G+I   + YD     LI+ ++ A+ L  +D +G SDP+VKV LLP +           ++
Sbjct: 7   GEIQLQINYDL--GNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEY 64

Query: 152 RLETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQV 211
           +  TK  +++LNP WN+T+ ++   +++L  + L + V+DYDRFS +D +GEV + L   
Sbjct: 65  KRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSST 124

Query: 212 DLSEKPTFWKALKP 225
              +    W  LK 
Sbjct: 125 SHLDNTPRWYPLKE 138



 Score = 86.5 bits (213), Expect = 6e-21
 Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 12/132 (9%)

Query: 232 GELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRI---------E 282
           GE+   + Y      L I +L+ARNL  +D NG SDP+VKV+L  G  ++          
Sbjct: 7   GEIQLQINY--DLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEY 64

Query: 283 KRKTQIFKCNLNPVFNESFSF-NVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNG 341
           KR+T+  + +LNP +N++  + ++  E++ + +L V V D+D    N+ +G +L+   + 
Sbjct: 65  KRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSST 124

Query: 342 SGASETKHWQDM 353
           S    T  W  +
Sbjct: 125 SHLDNTPRWYPL 136


>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 132

 Score =  104 bits (261), Expect = 2e-27
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 100 ENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK--HRLETKI 157
           E  G+I+     D     LI+ V  AK L   D +G SDPYVK+ L+PD K   + +TK 
Sbjct: 1   ERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKT 58

Query: 158 KRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKP 217
            + +LNP WNET  F+       + R L + ++D+D  SR+D +G +   + ++  +   
Sbjct: 59  IKCSLNPEWNETFRFQLKE--SDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVD 116

Query: 218 TFWKALKPPAKDKC 231
             W  L    + + 
Sbjct: 117 G-WFKLLSQEEGEY 129



 Score = 96.7 bits (240), Expect = 1e-24
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 230 KCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIF 289
           + G +           VL + +  A+NL   D NG SDPYVK+ L    K   K+KT+  
Sbjct: 2   RRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTI 59

Query: 290 KCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKH 349
           KC+LNP +NE+F F +  E  ++  L+V + D+D   RN+ +G +          +    
Sbjct: 60  KCSLNPEWNETFRFQLK-ESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQK-AGVDG 117

Query: 350 WQDMITKP 357
           W  ++++ 
Sbjct: 118 WFKLLSQE 125


>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus
           norvegicus) [TaxId: 10116]}
          Length = 130

 Score =  101 bits (252), Expect = 2e-26
 Identities = 57/126 (45%), Positives = 85/126 (67%), Gaps = 5/126 (3%)

Query: 103 GQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTL 162
           G+I F+L Y + +  L++R++ A +LPAKD +G SDPYVK+ LLPD+K + +TK+ R+TL
Sbjct: 5   GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTL 64

Query: 163 NPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKP---TF 219
           NP +NET  F   P+ +L  R LH  V+D+DRFSR D IG+V L    ++L+E+P     
Sbjct: 65  NPIFNETFQFS-VPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDN-LLELAEQPPDRPL 122

Query: 220 WKALKP 225
           W+ +  
Sbjct: 123 WRDILE 128



 Score = 92.3 bits (228), Expect = 4e-23
 Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 4/128 (3%)

Query: 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQI 288
             CG +  +L Y   +  L + +L+A +L AKD NG SDPYVK++      R +K +T++
Sbjct: 2   APCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIY--LLPDRKKKFQTKV 59

Query: 289 FKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIG--RILLAGKNGSGASE 346
            +  LNP+FNE+F F+VP  ++ +  L+  V DFD   R++LIG   +    +      +
Sbjct: 60  HRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPD 119

Query: 347 TKHWQDMI 354
              W+D++
Sbjct: 120 RPLWRDIL 127


>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 138

 Score = 92.3 bits (228), Expect = 6e-23
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 5/135 (3%)

Query: 95  NTEPSENVGQIHFSLEYDFDNSTLILRVISAKELPAKDMSGTSDPYVKVALLPDKK-HRL 153
           ++       ++H+ L+YD   + L +  + A      +  G  D YV+ ++         
Sbjct: 5   SSGSWNQAPKLHYCLDYDCQKAELFVTRLEAVTS---NHDGGCDCYVQGSVANRTGSVEA 61

Query: 154 ETKIKRRTLNPRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDL 213
           +T +K+R L+  W E L       ++L +  L L +   DRFSR    GE+ L L    +
Sbjct: 62  QTALKKRQLHTTWEEGLVLP-LAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSV 120

Query: 214 SEKPTFWKALKPPAK 228
                 W  LK    
Sbjct: 121 PLGAAQWGELKTSGP 135



 Score = 86.9 bits (214), Expect = 5e-21
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 4/128 (3%)

Query: 229 DKCGELLTSLCYHPSNSVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQI 288
           ++  +L   L Y    + L +T L+A      + +G  D YV+           + +T +
Sbjct: 10  NQAPKLHYCLDYDCQKAELFVTRLEAVTS---NHDGGCDCYVQGS-VANRTGSVEAQTAL 65

Query: 289 FKCNLNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETK 348
            K  L+  + E     +  E++   +L + +   D   R+ + G + L     S      
Sbjct: 66  KKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAA 125

Query: 349 HWQDMITK 356
            W ++ T 
Sbjct: 126 QWGELKTS 133


>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 136

 Score = 90.2 bits (223), Expect = 3e-22
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 6/128 (4%)

Query: 117 TLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFP 176
           TL + ++SAK L   D     DPYV++      +       +     P WNET  F    
Sbjct: 11  TLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKS--NVAEGMGTTPEWNETFIFTVSE 68

Query: 177 IQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDKCGELLT 236
                +  L   +FD D  + DD++GE  +PL  V +              ++  GE+  
Sbjct: 69  ----GTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWV 124

Query: 237 SLCYHPSN 244
           +L + PS 
Sbjct: 125 ALSFKPSG 132



 Score = 75.2 bits (184), Expect = 6e-17
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 246 VLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNV 305
            L + L+ A+ L+  D     DPYV++  +      +++          P +NE+F F V
Sbjct: 11  TLEVVLVSAKGLEDADFLNNMDPYVQLTCRT----QDQKSNVAEGMGTTPEWNETFIFTV 66

Query: 306 PWEKIRECSLNVMVMDFDNIGRNELIGRILL 336
                    L   + D D    ++ +G   +
Sbjct: 67  SEG---TTELKAKIFDKDVGTEDDAVGEATI 94


>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 126

 Score = 85.5 bits (211), Expect = 9e-21
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 118 LILRVISAKELP---AKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEG 174
             + V+ A ++      DM  T DPYV++ +      R  T+     +NP WNET  F  
Sbjct: 5   FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFIL 64

Query: 175 FPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAK 228
            P    Q  VL + + D +    D+++G     +  + + EK           +
Sbjct: 65  DP---NQENVLEITLMDANYV-MDETLGTATFTVSSMKVGEKKEVPFIFNQVTE 114



 Score = 67.4 bits (164), Expect = 2e-14
 Identities = 24/135 (17%), Positives = 52/135 (38%), Gaps = 22/135 (16%)

Query: 243 SNSVLTITLLKARNLK---AKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNE 299
           S+   T+ +L+A  +      D+    DPYV++++        +++T+ F  ++NPV+NE
Sbjct: 1   SSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFI--STTPDSRKRTRHFNNDINPVWNE 58

Query: 300 SFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQ 359
           +F F +   +     + +M  ++     +E +G       +               K  +
Sbjct: 59  TFEFILDPNQENVLEITLMDANY---VMDETLGTATFTVSS--------------MKVGE 101

Query: 360 TIVQWHRLKPDHEMQ 374
                       EM 
Sbjct: 102 KKEVPFIFNQVTEMV 116


>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane
           domain-containing protein 2, MCTP2 {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 126

 Score = 77.1 bits (189), Expect = 9e-18
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 117 TLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGFP 176
            L ++V+ A +L A D SG SDP+  +        RL+T    + LNP WN+   F    
Sbjct: 7   ILQVKVLKAADLLAADFSGKSDPFCLL---ELGNDRLQTHTVYKNLNPEWNKVFTFPIKD 63

Query: 177 IQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDKCGELLT 236
           I      VL + VFD D     D +G+V +PL  +   +   +    K   +   G +  
Sbjct: 64  IH----DVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYL 119

Query: 237 SL 238
            +
Sbjct: 120 EM 121



 Score = 60.6 bits (146), Expect = 6e-12
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 246 VLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNV 305
           +L + +LKA +L A D +GKSDP+  +         ++ +T     NLNP +N+ F+F +
Sbjct: 7   ILQVKVLKAADLLAADFSGKSDPFCLLE-----LGNDRLQTHTVYKNLNPEWNKVFTFPI 61

Query: 306 PWEKIRECSLNVMVMDFDNIGRNELIGRILL 336
             +        V V D D     + +G++ +
Sbjct: 62  -KDIHDVLE--VTVFDEDGDKPPDFLGKVAI 89


>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 133

 Score = 71.7 bits (175), Expect = 9e-16
 Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 15/130 (11%)

Query: 116 STLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGF 175
           S L + VISAK    K       PYV+V +    K     +    T +P+W + L     
Sbjct: 6   SQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKT---EKCNNTNSPKWKQPLTVIVT 62

Query: 176 PIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLS-----EKPTFWKALKPPAK-- 228
           P+ K     LH  V+ +     D  +G   L + +   S     E+      L    +  
Sbjct: 63  PVSK-----LHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPT 117

Query: 229 DKCGELLTSL 238
           +  G+L   L
Sbjct: 118 ETIGDLSICL 127



 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 9/92 (9%)

Query: 245 SVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFN 304
           S L IT++ A+  + K       PYV+V +       + +KT+      +P + +  +  
Sbjct: 6   SQLQITVISAKLKENKKNWFGPSPYVEVTV-----DGQSKKTEKCNNTNSPKWKQPLTVI 60

Query: 305 VPWEKIRECSLNVMVMDFDNIGRNELIGRILL 336
           V         L+  V     +  + L+G   L
Sbjct: 61  VT----PVSKLHFRVWSHQTLKSDVLLGTAAL 88


>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1
           (PLC-D1), C-terminal domain {Rat (Rattus norvegicus)
           [TaxId: 10116]}
          Length = 131

 Score = 71.3 bits (174), Expect = 1e-15
 Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 240 YHPSNSVLTITLLKARNL--KAKDINGKSDPYVKVWLQFGEKRIEKRKTQ-IFKCNLNPV 296
           + P    L + ++  + L    K+ N   DP V V +    +    R+T  I     NP 
Sbjct: 1   WRPER--LRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPR 58

Query: 297 FNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILL 336
           ++  F F V    +       MV D+D+  +N+ IG+  +
Sbjct: 59  WDMEFEFEVTVPDLALVR--FMVEDYDSSSKNDFIGQSTI 96



 Score = 70.9 bits (173), Expect = 1e-15
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 117 TLILRVISAKELPAKDM--SGTSDPYVKVALLP---DKKHRLETKIKRRTLNPRWNETLY 171
            L +R+IS ++LP  +   +   DP V V +     D   R    I     NPRW+    
Sbjct: 5   RLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFE 64

Query: 172 FEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQ 210
           F    +      ++   V DYD  S++D IG+  +P   
Sbjct: 65  F---EVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNS 100


>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 122

 Score = 67.3 bits (164), Expect = 2e-14
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 21/127 (16%)

Query: 116 STLILRVISAKELPAKDMSGTSDPYVKVALL-----PDKKHRLETKIKRRTLNPRWNETL 170
           +TL + VIS + L  +        YV+V L      P +++R +      ++NP W E  
Sbjct: 1   TTLSITVISGQFLSERS----VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEP 56

Query: 171 YFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDK 230
            F    I   +   L + V +      +  +G   +P+     +    +          +
Sbjct: 57  -FVFEKILMPELASLRVAVMEEG----NKFLGHRIIPIN----ALNSGYHHL---CLHSE 104

Query: 231 CGELLTS 237
               LT 
Sbjct: 105 SNMPLTM 111



 Score = 56.5 bits (136), Expect = 1e-10
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 245 SVLTITLLKARNLKAKDINGKSDPYVKVWLQ---FGEKRIEKRKTQIFKCNLNPVFNESF 301
           + L+IT++  + L  + +      YV+V L       KR  + K      ++NPV+ E  
Sbjct: 1   TTLSITVISGQFLSERSV----RTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEP 56

Query: 302 SFNVPWEKIRECSLNVMVMDFDN 324
                       SL V VM+  N
Sbjct: 57  FVFEKILMPELASLRVAVMEEGN 79


>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 123

 Score = 65.9 bits (160), Expect = 6e-14
 Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 15/129 (11%)

Query: 119 ILRV-ISAKEL-PAKDMSGTSDPYVKVALLPDKKHR--LETKIKRRTLNPRWNETLYFEG 174
            LR+  ++ EL   +     S P+  V +              K+ T+ P W  T     
Sbjct: 4   FLRISFNSYELGSLQAEDDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAH- 62

Query: 175 FPIQKLQSRVLHLHVFDYDRFSR-DDSIGEVFLPLCQVDLSEKPTFWKALKPPAKDKCGE 233
                 + RV+ + +         + ++G   L       + K  FW  L+P       +
Sbjct: 63  ----IYEGRVIQIVLMRAAEDPMSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ-----AK 113

Query: 234 LLTSLCYHP 242
           +L  + Y  
Sbjct: 114 VLMCVQYFL 122



 Score = 49.0 bits (116), Expect = 6e-08
 Identities = 14/123 (11%), Positives = 35/123 (28%), Gaps = 17/123 (13%)

Query: 247 LTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFNVP 306
           L I+         +  +  S P+  V ++        +     K  + P +  +F  ++ 
Sbjct: 5   LRISFNSYELGSLQAEDDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIY 64

Query: 307 WEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQWHR 366
                   + +++M       +E+   +                 +   K       W  
Sbjct: 65  ----EGRVIQIVLMRAAEDPMSEVTVGV-------------SVLAERCKKNNGKAEFWLD 107

Query: 367 LKP 369
           L+P
Sbjct: 108 LQP 110


>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat
           (Rattus rattus) [TaxId: 10117]}
          Length = 136

 Score = 66.1 bits (160), Expect = 9e-14
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 25/143 (17%)

Query: 115 NSTLILRVISAKELPAKDMS-----------GTSDPYVKVALLPDKKHRLETKIKRRTLN 163
           N  L +++  A  L     S              DPY+ +    D     +T  K++T +
Sbjct: 5   NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALN--VDDSRIGQTATKQKTNS 62

Query: 164 PRWNETLYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQV--DLSEKPTFWK 221
           P W++    +         R + L VF       DD +    +   ++  + S     W 
Sbjct: 63  PAWHDEFVTDVC-----NGRKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWI 117

Query: 222 ALKPPAKDKCGELLTSLCYHPSN 244
            L+P      G++   +    S+
Sbjct: 118 DLEP-----EGKVYVIIDLSGSS 135



 Score = 58.0 bits (139), Expect = 5e-11
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 31/137 (22%)

Query: 244 NSVLTITLLKARNLKAKDI-----------NGKSDPYVKVWLQFGEKRIEKRKTQIFKCN 292
           N +L I + +A +LK                   DPY+ +            +T   +  
Sbjct: 5   NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALN----VDDSRIGQTATKQKT 60

Query: 293 LNPVFNESFSFNVPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQD 352
            +P +++ F  +V         + + V     IG ++ +    +             +++
Sbjct: 61  NSPAWHDEFVTDVC----NGRKIELAVFHDAPIGYDDFVANCTI------------QFEE 104

Query: 353 MITKPRQTIVQWHRLKP 369
           ++    +    W  L+P
Sbjct: 105 LLQNGSRHFEDWIDLEP 121


>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus)
           [TaxId: 10116]}
          Length = 128

 Score = 60.9 bits (147), Expect = 5e-12
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 14/121 (11%)

Query: 116 STLILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKRRTLNPRWNETLYFEGF 175
           S L + V  AK   A++     + YV    L  +  +  T    R   P W +   FE  
Sbjct: 2   SLLCVGVKKAKFDGAQE---KFNTYVT---LKVQNVKSTTIAV-RGSQPSWEQDFMFEIN 54

Query: 176 PIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDLSEK--PTFWKALKPPAKDKCGE 233
            +         + V++      D  +G V++PL  +  S +  P  W  L   A     E
Sbjct: 55  RLDLGL----TVEVWNKGLIW-DTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSE 109

Query: 234 L 234
           +
Sbjct: 110 I 110



 Score = 54.0 bits (129), Expect = 1e-09
 Identities = 19/129 (14%), Positives = 43/129 (33%), Gaps = 25/129 (19%)

Query: 245 SVLTITLLKARNLKAKDINGKSDPYVKVWLQFGEKRIEKRKTQIFKCNLNPVFNESFSFN 304
           S+L + + KA+   A++   K + YV + +Q       K  T   +    P + + F F 
Sbjct: 2   SLLCVGVKKAKFDGAQE---KFNTYVTLKVQ-----NVKSTTIAVR-GSQPSWEQDFMFE 52

Query: 305 VPWEKIRECSLNVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMITKPRQTIVQW 364
           +        ++ V          + ++G + +              + +     +   +W
Sbjct: 53  I-NRLDLGLTVEVWNKGLI---WDTMVGTVWIP------------LRTIRQSNEEGPGEW 96

Query: 365 HRLKPDHEM 373
             L     M
Sbjct: 97  LTLDSQAIM 105


>d1c6va_ c.55.3.2 (A:) Retroviral integrase, catalytic domain
           {Simian immunodeficiency virus [TaxId: 11723]}
          Length = 159

 Score = 35.3 bits (80), Expect = 0.007
 Identities = 17/107 (15%), Positives = 29/107 (27%), Gaps = 4/107 (3%)

Query: 344 ASETKHWQDMITKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPASNGAAENMVG 403
           A                                    G+ H     Y+P S G  E M  
Sbjct: 44  ALFLLKLAGRWPITHLHTDNGANFASQEVKMVA-WWAGIEHTFGVPYNPQSQGVVEAMNH 102

Query: 404 VVKRFLRK-CNWNNVDEELLNFSQ-SYNSTPHTTLG-VSPAELHLGR 447
            +K  + +     N  E ++  +    N      +G ++PAE  +  
Sbjct: 103 HLKNQIDRIREQANSVETIVLMAVHCMNHKRRGGIGDMTPAERLINM 149


>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
           recognition particle receptor FtsY {Thermus aquaticus
           [TaxId: 271]}
          Length = 207

 Score = 27.4 bits (60), Expect = 2.9
 Identities = 18/122 (14%), Positives = 42/122 (34%), Gaps = 10/122 (8%)

Query: 334 ILLAGKNGSGASET-----KHWQDMITKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIP 388
           +L+ G NG G + T     +++Q++  K         R     ++  + + + +  I+ P
Sbjct: 9   VLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGP 68

Query: 389 TYHPASNGAAENMVGVVKR-----FLRKCNWNNVDEELLNFSQSYNSTPHTTLGVSPAEL 443
                +  A + +  +  R     F+      +    L+   +             P E+
Sbjct: 69  EGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEV 128

Query: 444 HL 445
            L
Sbjct: 129 WL 130


>d2vn6a1 b.2.2.2 (A:12-152) Cohesin domain {Clostridium
           cellulolyticum [TaxId: 1521]}
          Length = 141

 Score = 26.0 bits (57), Expect = 6.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 89  VDMYIDNTEPSENVGQIHFSLEYD 112
           V +   +    +NVG  +F L YD
Sbjct: 19  VPVTFADVAKMKNVGTCNFYLGYD 42


>d6paxa2 a.4.1.5 (A:69-133) Pax-6 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 65

 Score = 24.6 bits (54), Expect = 6.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 454 DKLLPNPTCTQNKIPSVSN 472
           D+LL    CT + IPSVS+
Sbjct: 33  DRLLSEGVCTNDNIPSVSS 51


>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
           toxin zeta subunit {Streptococcus pyogenes [TaxId:
           1314]}
          Length = 273

 Score = 26.5 bits (57), Expect = 8.1
 Identities = 15/98 (15%), Positives = 26/98 (26%), Gaps = 5/98 (5%)

Query: 334 ILLAGKNGSGASETKHWQDMITKPRQTIVQWHRLKPDHEMQTFLQSVGVSHIRIPTYHPA 393
            LL G+ GSG +  +          +T      +  D   Q       +  +        
Sbjct: 35  FLLGGQPGSGKTSLRS-----AIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKH 89

Query: 394 SNGAAENMVGVVKRFLRKCNWNNVDEELLNFSQSYNST 431
               +  M   +   L    +N V E     +     T
Sbjct: 90  VTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQT 127


>d1m4ua_ g.17.1.7 (A:) Noggin {Human (Homo sapiens) [TaxId: 9606]}
          Length = 206

 Score = 25.7 bits (56), Expect = 9.9
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 7/52 (13%)

Query: 118 LILRVISAKELPAKDMSGTSDPYVKVALLPDKKHRLETKIKR---RTLNPRW 166
           L +R   +  LP  D+    DP       P +K   ET ++       +P +
Sbjct: 5   LHIRPAPSDNLPLVDLIEHPDPIFD----PKEKDLNETLLRSLLGGHYDPGF 52


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.132    0.392 

Gapped
Lambda     K      H
   0.267   0.0713    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,739,831
Number of extensions: 80973
Number of successful extensions: 252
Number of sequences better than 10.0: 1
Number of HSP's gapped: 191
Number of HSP's successfully gapped: 47
Length of query: 475
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 386
Effective length of database: 1,185,626
Effective search space: 457651636
Effective search space used: 457651636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.0 bits)