BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15959
(393 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D3YZP9|CCDC6_MOUSE Coiled-coil domain-containing protein 6 OS=Mus musculus GN=Ccdc6
PE=3 SV=1
Length = 469
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 260/334 (77%), Gaps = 23/334 (6%)
Query: 1 MADSASESDSNSMDGVALMMPP----------------------SPVTREQLQKRIESLQ 38
MADSASESD+++ G M SP E+L R+ SLQ
Sbjct: 1 MADSASESDTDAAGGGPAAMQSSCSATSGGSGGGGGGKSGGIVISPFRLEELTNRLASLQ 60
Query: 39 QQNRVLKVELETYKLQLRALQEENKNLRQTSVNIQAKAEQEEEFISNTLMKKIQALKKEK 98
Q+N+VLK+ELETYKL+ +ALQEEN++LR+ SV IQA+AEQEEEFISNTL KKIQAL+KEK
Sbjct: 61 QENKVLKIELETYKLKCKALQEENRDLRKASVTIQARAEQEEEFISNTLFKKIQALQKEK 120
Query: 99 ETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTIEQEQERVVNKLMRKIEKLEAETDA 158
ETLA +YE+EEEFLTN+LSRKL QL EK LEQ +EQEQE VNKLM+KI+KLE +T +
Sbjct: 121 ETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVNKLMKKIKKLENDTIS 180
Query: 159 KQNNLEQLRREKVELENTLEQEQEALVNKLWKRMDKLEAEKRILQIKLDQPVSDPSSPHD 218
KQ LEQLRREK++LENTLEQEQEALVN+LWKRMDKLEAEKRILQ KLDQPVS P SP D
Sbjct: 181 KQLTLEQLRREKIDLENTLEQEQEALVNRLWKRMDKLEAEKRILQEKLDQPVSAPPSPRD 240
Query: 219 MN-NGDTASNLSTHIHSLRSEVMRLRNQLANTQQEHTEKMERYVKDEKNVREENLRLQRK 277
++ D+ N+ HI L++EV RL+ QL Q +H+EKM +Y+++E+++REENLRLQRK
Sbjct: 241 ISMEIDSPENMMRHIRFLKNEVERLKKQLRAAQLQHSEKMAQYLEEERHMREENLRLQRK 300
Query: 278 LQREVERREALCRHLSESESSLEMEEERHYNEIA 311
LQRE+ERREALCR LSESESSLEM++ER++NE++
Sbjct: 301 LQREMERREALCRQLSESESSLEMDDERYFNEMS 334
>sp|Q16204|CCDC6_HUMAN Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6
PE=1 SV=2
Length = 474
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/341 (61%), Positives = 260/341 (76%), Gaps = 30/341 (8%)
Query: 1 MADSASESDSNSMDG-----------------------------VALMMPPSPVTREQLQ 31
MADSASESD++ G + + SP E+L
Sbjct: 1 MADSASESDTDGAGGNSSSSAAMQSSCSSTSGGGGGGGGGGGGGKSGGIVISPFRLEELT 60
Query: 32 KRIESLQQQNRVLKVELETYKLQLRALQEENKNLRQTSVNIQAKAEQEEEFISNTLMKKI 91
R+ SLQQ+N+VLK+ELETYKL+ +ALQEEN++LR+ SV IQA+AEQEEEFISNTL KKI
Sbjct: 61 NRLASLQQENKVLKIELETYKLKCKALQEENRDLRKASVTIQARAEQEEEFISNTLFKKI 120
Query: 92 QALKKEKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTIEQEQERVVNKLMRKIEK 151
QAL+KEKETLA +YE+EEEFLTN+LSRKL QL EK LEQ +EQEQE VNKLM+KI+K
Sbjct: 121 QALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVNKLMKKIKK 180
Query: 152 LEAETDAKQNNLEQLRREKVELENTLEQEQEALVNKLWKRMDKLEAEKRILQIKLDQPVS 211
LE +T +KQ LEQLRREK++LENTLEQEQEALVN+LWKRMDKLEAEKRILQ KLDQPVS
Sbjct: 181 LENDTISKQLTLEQLRREKIDLENTLEQEQEALVNRLWKRMDKLEAEKRILQEKLDQPVS 240
Query: 212 DPSSPHDMN-NGDTASNLSTHIHSLRSEVMRLRNQLANTQQEHTEKMERYVKDEKNVREE 270
P SP D++ D+ N+ HI L++EV RL+ QL Q +H+EKM +Y+++E+++REE
Sbjct: 241 APPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQLRAAQLQHSEKMAQYLEEERHMREE 300
Query: 271 NLRLQRKLQREVERREALCRHLSESESSLEMEEERHYNEIA 311
NLRLQRKLQRE+ERREALCR LSESESSLEM++ER++NE++
Sbjct: 301 NLRLQRKLQREMERREALCRQLSESESSLEMDDERYFNEMS 341
>sp|Q09350|YRU4_CAEEL Uncharacterized protein T09B9.4 OS=Caenorhabditis elegans
GN=T09B9.4 PE=4 SV=1
Length = 528
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 58 LQEENKNLRQTSVNIQAKAEQEEEFISNTLMKKIQALKKEKETLAHHYEQEEEFLTNDLS 117
L E NK LR +V + KAEQEEE+ISN+L+KKIQ L ++K+ L Y+++EE LT L
Sbjct: 166 LLEANKQLRIAAVQMFTKAEQEEEYISNSLLKKIQQLNQDKDYLVKKYQKDEESLTKSLM 225
Query: 118 RKLNQLTEEKYRLEQTIEQEQERVVNKLMRKIEKLEAETD----AKQNNLEQLRREKVEL 173
+ ++ + E E+++ +IE+L + Q L +LR EKV+
Sbjct: 226 ANVAKIPD-----VHGDEAAAEKLMADKQAEIERLRTYCSRAEKSYQEELMRLRAEKVDH 280
Query: 174 ENTLEQEQEALVNKLWKRMDKLEAEKRILQIKLD 207
E+ LEQEQE L+N L KRM ++ EKR LQ L+
Sbjct: 281 ESALEQEQELLINTLGKRMSQMNEEKRKLQQALE 314
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 56 RALQEENKNLRQTSVNIQAKAEQEEEFISNTLMKKIQALKKEKETLAHHYEQE--EEFLT 113
++ QEE LR V+ ++ EQE+E + NTL K++ + +EK L E F+
Sbjct: 264 KSYQEELMRLRAEKVDHESALEQEQELLINTLGKRMSQMNEEKRKLQQALEMAYLNGFVD 323
Query: 114 ND--LSRKLNQLTEEKYRLEQTIEQEQERVVNK----------LMRKIEKLEAETDAKQ- 160
D + L+ +KY VVN L+R ++ + +Q
Sbjct: 324 FDDTVEVALHASASQKYNGNSPNVSANSPVVNTNSPAVSTSSPLVRNTDQQSTSSYRQQL 383
Query: 161 NNLEQLRREKVELENTLEQEQ------EALVNKLWKRMDKLEA---EKRILQIKLDQPVS 211
N L E +L QE+ EA V KL +RM K+EA RI ++ D P++
Sbjct: 384 NETAHLHIENKKLVGMCNQERRRSQATEAEVKKLNQRMSKMEAVLEAIRIEAVRTDGPLA 443
>sp|Q54Q72|RDCII_DICDI PH domain-containing rcdII OS=Dictyostelium discoideum GN=rcdII
PE=2 SV=1
Length = 464
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 7/131 (5%)
Query: 34 IESLQQQNRVLKVELETYKLQLRALQEENKNLRQTSVNIQAKAEQEEEFISNTLMKKIQA 93
IE LQ+Q L T K + R L EE K LR + IQ E EEE+I+N MK +
Sbjct: 14 IEDLQRQ-------LLTEKNRNRTLVEELKQLRDSHARIQIVTENEEEYITNKFMKYLNQ 66
Query: 94 LKKEKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTIEQEQERVVNKLMRKIEKLE 153
LKKEKE LA EQEEE+LTN L +K+ + +EK LE +EQE+E +VNKL ++I+ +
Sbjct: 67 LKKEKEELALKVEQEEEYLTNTLQKKMLTIMKEKVDLENQLEQEEEFIVNKLQKQIQDVM 126
Query: 154 AETDAKQNNLE 164
+ A + LE
Sbjct: 127 KDKKALEKRLE 137
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 36/238 (15%)
Query: 86 TLMKKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTIEQEQERVVNKL 145
TL+++++ L+ + E EEE++TN + LNQL +EK L +EQE+E + N L
Sbjct: 30 TLVEELKQLRDSHARIQIVTENEEEYITNKFMKYLNQLKKEKEELALKVEQEEEYLTNTL 89
Query: 146 MRKIEKLEAETDAKQNNLEQLRREKVELENTLEQEQEALVNKLWKRMDKLEAEKRILQIK 205
+K + + +EKV+LEN LEQE+E +VNKL K++ + +K+ L+ +
Sbjct: 90 QKK--------------MLTIMKEKVDLENQLEQEEEFIVNKLQKQIQDVMKDKKALEKR 135
Query: 206 LDQPVSDPSSPHDMNNGDTASNLSTHIHSLRSEVMRLRNQLANTQQEHTEKMERYVKDEK 265
L+ ++D S + L+ EV+ LR+++ + +K +D
Sbjct: 136 LENEINDHRS----------------LLKLQDEVIVLRDKIKELESNGNKK-----EDID 174
Query: 266 NVREENLRLQRKLQREVERREALCRHLSESESSLEMEEERHYNEIAHSMRLVGSSPSS 323
++ EN L +K+ RE E+ + ++ S+LE+++ER++N + R + S P+S
Sbjct: 175 ALKAENFVLGQKIIREQEKLSKVNSENTKLMSNLEIDDERNFNNKSKRNRSI-SFPTS 231
>sp|A6PWD2|FHAD1_MOUSE Forkhead-associated domain-containing protein 1 OS=Mus musculus
GN=Fhad1 PE=2 SV=1
Length = 1420
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 26/128 (20%)
Query: 97 EKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTIEQEQER---VVNKLMRKIEKLE 153
EKE LA EQEE+ L K+ QLTEEK LE++I QE+ R + K ++ +LE
Sbjct: 671 EKEKLAEKLEQEEK-----LKAKIQQLTEEKAALEESIGQEKSRSEEALEKAQARVRELE 725
Query: 154 ----AETDAKQNN-----------LEQLRREKVELENTLEQEQEALVNKLWKRM---DKL 195
++ +A +N+ LE RR+ +LEN L Q++E N ++++ D L
Sbjct: 726 NHLASQKEALENSVAQEKRKMREMLEAERRKAQDLENQLTQQKEISENNTYEKLKMRDTL 785
Query: 196 EAEKRILQ 203
E EKR +Q
Sbjct: 786 EKEKRKIQ 793
>sp|Q4G0X9|CCD40_HUMAN Coiled-coil domain-containing protein 40 OS=Homo sapiens GN=CCDC40
PE=2 SV=2
Length = 1142
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 90 KIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTIEQEQERVVNKLMRKI 149
KI+ KKE++ + HH + L NDL +KLN L + + +EQ N+ +R +
Sbjct: 818 KIEQEKKEQKEIEHHMKD----LDNDL-KKLNMLMNKNRCSSEELEQNNRVTENEFVRSL 872
Query: 150 EKLEAETDAKQNNLEQLRREKVELENTLEQEQEALVNKLWKRMDKLEAEKRILQIKLDQP 209
+ E ET Q+ L QL EK L N L + + ++ LW++ +L E R
Sbjct: 873 KASERETIKMQDKLNQLSEEKATLLNQLVEAEHQIM--LWEKKIQLAKEMR--------- 921
Query: 210 VSDPSSPHDMNNGDTASNLSTHIHSLRSEVMRLR---NQLANTQQEHTEKMERYVKDEKN 266
S D G T I +++ E+ R++ QL Q++ ME V
Sbjct: 922 -----SSVDSEIG------QTEIRAMKGEIHRMKVRLGQLLKQQEKMIRAMELAV----- 965
Query: 267 VREENLRLQRKLQREVERREALCR 290
R E + Q + QR+++R+ AL R
Sbjct: 966 ARRETVTTQAEGQRKMDRK-ALTR 988
>sp|Q9P219|DAPLE_HUMAN Protein Daple OS=Homo sapiens GN=CCDC88C PE=1 SV=3
Length = 2028
Score = 38.5 bits (88), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 28 EQLQKRIESLQQQNRVLKVELETYK---LQLRALQEENKNLRQTSVNIQAKAEQEEEFIS 84
E L+ + LQ +NR L+ L+T + LQL L+ +NK L ++ ++ E F S
Sbjct: 662 EALEHESQGLQLENRTLRKSLDTLQNVSLQLEGLERDNKQLDAENLELRRLVETMR-FTS 720
Query: 85 NTLM---KKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQL-------TEEKYRLEQTI 134
L ++ Q L++EKE L + + L L +K +L + E RL+Q++
Sbjct: 721 TKLAQMERENQQLEREKEELRKNVD-----LLKALGKKSERLELSYQSVSAENLRLQQSL 775
Query: 135 EQEQERVVNKLMRKIEKLEAETDAKQNNLEQLRREKVELENTLEQEQEAL---VNKLWKR 191
E + L ++ +LEAE A + +LE LR +LE E++++AL V +L K
Sbjct: 776 ESSSHKT-QTLESELGELEAERQALRRDLEALRLANAQLEGA-EKDRKALEQEVAQLEKD 833
Query: 192 MDKLEAEKRIL--QIKLDQPVSDPSS 215
LE E + L Q++L V D S+
Sbjct: 834 KKLLEKEAKRLWQQVELKDAVLDDST 859
>sp|O60437|PEPL_HUMAN Periplakin OS=Homo sapiens GN=PPL PE=1 SV=4
Length = 1756
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 36/196 (18%)
Query: 22 PSPVTRE---QLQKRIESLQQQNRVLKVELETYKLQLRALQEENKNLRQTSV-----NIQ 73
P PV E QLQ+ + Q +N++L+ ELE +LQLRAL++E ++ Q V I+
Sbjct: 942 PDPVLEESFQQLQRTLAEEQHKNQLLQEELEALQLQLRALEQETRDGGQEYVVKEVLRIE 1001
Query: 74 AKAEQEEEFISNTLMKKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQT 133
Q +E + L ++++AL+++K +E E L L +++ L EEK R
Sbjct: 1002 PDRAQADEVLQ--LREELEALRRQKGA------REAEVLL--LQQRVAALAEEKSRA--- 1048
Query: 134 IEQEQERVVNKLMRKIE---KLEAETDAKQNNLEQLRREKVELENTLEQEQEALVNKLWK 190
QE+V K + K++ +LEAE Q + ++ ++ L ++QE ++ L
Sbjct: 1049 ----QEKVTEKEVVKLQNDPQLEAEYQQLQEDHQR--------QDQLREKQEEELSFLQD 1096
Query: 191 RMDKLEAEKRILQIKL 206
++ +LE E+ + + K+
Sbjct: 1097 KLKRLEKERAMAEGKI 1112
>sp|Q7NBF9|PLPA_MYCGA Fibronectin-binding protein PlpA OS=Mycoplasma gallisepticum
(strain R(low / passage 15 / clone 2)) GN=plpA PE=1 SV=2
Length = 854
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 25 VTREQLQKRIESLQQQNRVLKVELETYKLQLRALQEENKNLRQTSVNIQAKAEQEEEFIS 84
T +QL+ E+L+ N+ ++ +L+ + ++ +N Q V+ ++K EQ E ++
Sbjct: 418 TTNQQLKTSNEALEDSNKRIESQLQALLDSINDIKSKNNQPSQEEVDSRSKLEQRLEELA 477
Query: 85 NTLMKKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTIEQEQE----- 139
L + + + + E+ ++Q ++ L + +K+ LTE+ + +++ Q QE
Sbjct: 478 YKLDQTKEIIDETSESSRESFQQSKDQLIENFEKKIELLTEKLNQTQESFNQSQEAKQQQ 537
Query: 140 --RVVNKLMRKIEKLEAETDAKQNNLEQLRREKVELENTLEQEQEALVNKLWKRMDKLEA 197
K+ R IE+ + D+ QN +++ +++E+ LE + E+ +KL + K +
Sbjct: 538 DKEFAQKIERIIEQTKEANDSLQN---RVKESSLDMESKLENKFESFADKLTEITSKKIS 594
Query: 198 EK 199
EK
Sbjct: 595 EK 596
>sp|Q69YQ0|CYTSA_HUMAN Cytospin-A OS=Homo sapiens GN=SPECC1L PE=1 SV=2
Length = 1117
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 160/393 (40%), Gaps = 70/393 (17%)
Query: 30 LQKRIESLQQQNRVLKVELETYK-------LQLRALQEENKNLRQTSVNIQAKAEQEEEF 82
+++ IES Q+ L LE YK +++ L+ + +N +Q + + ++
Sbjct: 544 MERIIESEQKGKAALAATLEEYKATVASDQIEMNRLKAQLENEKQKVAELYSIHNSGDKS 603
Query: 83 ISNTLMKKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLT--EEKYRLEQTIEQEQER 140
L++ ++ K++ ETLA +++ ND +R + + E++YR ++E ++
Sbjct: 604 DIQDLLESVRLDKEKAETLASSLQEDLAHTRNDANRLQDAIAKVEDEYR---AFQEEAKK 660
Query: 141 VVNKLMRKIEKLEAETDAKQNNLEQLRREKVELENTLEQEQEA------LVNKLWKRMDK 194
+ L +EKL ++ D K+ ++ ELE+ +EQ + +++ L + K
Sbjct: 661 QIEDLNMTLEKLRSDLDEKETERSDMKETIFELEDEVEQHRAVKLHDNLIISDLENTVKK 720
Query: 195 LEAEKRILQIKLDQPVSDPSSPHDMNNGDTASNLSTHIHSLRSEVMRLRNQLANTQQEHT 254
L+ +K HDM + T LR E R A+ Q
Sbjct: 721 LQDQK-----------------HDMER-----EIKTLHRRLREESAEWRQFQADLQTAVV 758
Query: 255 EKMERYVKDEKNVREENLRLQRKLQREVERREALCRHLSESESSLEMEE----------- 303
+ +K E +EE L+R+L E+ E L + L E +S + EE
Sbjct: 759 --IANDIKSE--AQEEIGDLKRRLHEAQEKNEKLTKELEEIKSRKQEEERGRVYNYMNAV 814
Query: 304 ERHYNEIAHSMRLVGSSPSSSRPLSPGASMLTTKEPRCFACGQTTVMPIPPPVHSRPQRI 363
ER + M L S +SS P +P L + F + +P P + R
Sbjct: 815 ERDLAALRQGMGLSRRSSTSSEP-TPTVKTLI----KSF----DSASQVPNPAAAAIPR- 864
Query: 364 KTPLLSVEQPTSPEGAPTP----TLGSPMDISK 392
TPL T P A +P ++ P+ SK
Sbjct: 865 -TPLSPSPMKTPPAAAVSPMQRHSISGPISTSK 896
>sp|Q2KNA1|CYTSA_PANTR Cytospin-A OS=Pan troglodytes GN=SPECC1L PE=2 SV=1
Length = 1117
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 160/393 (40%), Gaps = 70/393 (17%)
Query: 30 LQKRIESLQQQNRVLKVELETYK-------LQLRALQEENKNLRQTSVNIQAKAEQEEEF 82
+++ IES Q+ L LE YK +++ L+ + +N +Q + + ++
Sbjct: 544 MERIIESEQKGKAALAATLEEYKATVASDQIEMNRLKAQLENEKQKVAELYSIHNSGDKS 603
Query: 83 ISNTLMKKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLT--EEKYRLEQTIEQEQER 140
L++ ++ K++ ETLA +++ ND +R + + E++YR ++E ++
Sbjct: 604 DIQDLLESVRLDKEKAETLASSLQEDLAHTRNDANRLQDAIAKVEDEYR---AFQEEAKK 660
Query: 141 VVNKLMRKIEKLEAETDAKQNNLEQLRREKVELENTLEQEQEA------LVNKLWKRMDK 194
+ L +EKL ++ D K+ ++ ELE+ +EQ + +++ L + K
Sbjct: 661 QIEDLNMTLEKLRSDLDEKETERSDMKETIFELEDEVEQHRAVKLHDNLIISDLENTVKK 720
Query: 195 LEAEKRILQIKLDQPVSDPSSPHDMNNGDTASNLSTHIHSLRSEVMRLRNQLANTQQEHT 254
L+ +K HDM + T LR E R A+ Q
Sbjct: 721 LQDQK-----------------HDMER-----EIKTLHRRLREESAEWRQFQADLQTAVV 758
Query: 255 EKMERYVKDEKNVREENLRLQRKLQREVERREALCRHLSESESSLEMEE----------- 303
+ +K E +EE L+R+L E+ E L + L E +S + EE
Sbjct: 759 --IANDIKSE--AQEEIGDLKRRLHEAQEKNEKLTKELEEIKSRKQEEERGRVYNYMNAV 814
Query: 304 ERHYNEIAHSMRLVGSSPSSSRPLSPGASMLTTKEPRCFACGQTTVMPIPPPVHSRPQRI 363
ER + M L S +SS P +P L + F + +P P + R
Sbjct: 815 ERDLAALRQGMGLSRRSSTSSEP-TPTVKTLI----KSF----DSASQVPNPAAAAIPR- 864
Query: 364 KTPLLSVEQPTSPEGAPTP----TLGSPMDISK 392
TPL T P A +P ++ P+ SK
Sbjct: 865 -TPLSPSPMKTPPAAAVSPMQRHSISGPISTSK 896
>sp|Q9BV73|CP250_HUMAN Centrosome-associated protein CEP250 OS=Homo sapiens GN=CEP250 PE=1
SV=2
Length = 2442
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 25 VTREQLQKRIESLQQQNRVLKVELETYKLQLRALQEENKNLRQTSVNIQAKAEQEEEFIS 84
VT+ QL+ +I+++ Q V++ E+ KL+L + + + R + A+AEQE
Sbjct: 785 VTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQE---GK 841
Query: 85 NTLMKKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTI-EQEQERVVN 143
L ++ A +KE L +E+E + +L++ L L EK LE + EQ+ E
Sbjct: 842 TALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAI 901
Query: 144 KLMRKIEKLEAETDAKQNNLEQLRREKVELENTLEQEQEALVN 186
+ R+ E+ +AE+ Q LE +E+V L TL Q Q+ L +
Sbjct: 902 QAQREEERTQAESALCQMQLE-TEKERVSLLETLLQTQKELAD 943
>sp|Q2KN97|CYTSA_CHICK Cytospin-A OS=Gallus gallus GN=SPECC1L PE=2 SV=2
Length = 1118
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 30 LQKRIESLQQQNRVLKVELETYKLQLRALQEENKNLRQTSVNIQAKAEQEEEFIS----- 84
+++ IES Q+ + LE YK + + Q E L+ A+ E E++ ++
Sbjct: 545 MERIIESEQKSKTAIASTLEEYKATVASDQIEMNRLK-------AQLEHEKQKVAELYSI 597
Query: 85 ---------NTLMKKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQL--TEEKYRLEQT 133
L++ ++ K++ ETLA ++E ND +R + + E++YR+
Sbjct: 598 HNSGDKSDIQDLLESVRLDKEKAETLASSLQEELAHTRNDANRLQDAIAKVEDEYRV--- 654
Query: 134 IEQEQERVVNKLMRKIEKLEAETDAKQNNLEQLRREKVELENTLEQ 179
++E ++ + L +EKL AE D K+ ++ ELE+ +EQ
Sbjct: 655 FQEEAKKQIEDLNVTLEKLRAELDEKETERSDMKETIFELEDEVEQ 700
>sp|Q2KNA0|CYTSA_CANFA Cytospin-A OS=Canis familiaris GN=SPECC1L PE=2 SV=1
Length = 1117
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 157/393 (39%), Gaps = 70/393 (17%)
Query: 30 LQKRIESLQQQNRVLKVELETYK-------LQLRALQEENKNLRQTSVNIQAKAEQEEEF 82
+++ IES Q+ L LE YK +++ L+ + +N +Q + + ++
Sbjct: 544 MERIIESEQKGKAALAATLEEYKATVASDQIEMNRLKAQLENEKQKVAELYSIHNSGDKS 603
Query: 83 ISNTLMKKIQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLT--EEKYRLEQTIEQEQER 140
L++ ++ K++ ETLA +++ ND +R + + E++YR ++E ++
Sbjct: 604 DIQDLLESVRLDKEKAETLASSLQEDLAHTRNDANRLQDTIAKVEDEYR---AFQEEAKK 660
Query: 141 VVNKLMRKIEKLEAETDAKQNNLEQLRREKVELENTLEQEQEA------LVNKLWKRMDK 194
+ +L +EKL +E + K+ ++ ELE+ +EQ + +++ L + K
Sbjct: 661 QIEELNMTLEKLRSELEEKETERSDMKETIFELEDEVEQHRAVKLHDNLIISDLENTVKK 720
Query: 195 LEAEKRILQIKLDQPVSDPSSPHDMNNGDTASNLSTHIHSLRSEVMRLRNQLANTQQEHT 254
L+ +K HDM + T LR E R A+ Q
Sbjct: 721 LQDQK-----------------HDMER-----EIKTLHRRLREESAEWRQFQADLQTAVV 758
Query: 255 EKMERYVKDEKNVREENLRLQRKLQREVERREALCRHLSESESSLEMEE----------- 303
+ +K E +EE L+R+L E+ E L + L E +S + EE
Sbjct: 759 --IANDIKSE--AQEEIGDLKRRLHEAQEKNEKLTKELEEIKSRKQEEERGRVYNYMNAV 814
Query: 304 ERHYNEIAHSMRLVGSSPSSSRPLSPGASMLTTKEPRCFACGQTTVMPIPPPVHSRPQRI 363
ER + M L S +SS P +P L T IP
Sbjct: 815 ERDLAALRQGMGLSRRSSTSSEP-TPTVKTLIKSFDSASQVPNPTAAAIP---------- 863
Query: 364 KTPLLSVEQPTSPEGAPTP----TLGSPMDISK 392
+TPL T P A +P ++ P+ SK
Sbjct: 864 RTPLSPSPMKTPPAAAVSPMQRHSISGPISTSK 896
>sp|Q66GS9|CP135_HUMAN Centrosomal protein of 135 kDa OS=Homo sapiens GN=CEP135 PE=1 SV=2
Length = 1140
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 25 VTREQLQKRIESLQQQNRVLKVELETYKLQLRALQE--ENKNLRQTSVNIQAKAEQEEEF 82
+ EQLQ+ ++ Q + + + ELE+ + Q++ L+E + NL+ TS Q+EE
Sbjct: 671 IVNEQLQRSVDDYQHRLSIKRGELESAQAQIKILEEKIDELNLKMTS--------QDEE- 721
Query: 83 ISNTLMKKIQALKKEKETLAHHYEQEEEFLTN---DLSRKLNQLTEEKYRL---EQTIEQ 136
++ + K I + KEK+ L +++ E + N +L+ K + + K + E ++ Q
Sbjct: 722 -AHVMKKTIGVIDKEKDFLQETVDEKTEKIANLQENLANKEKAVAQMKIMISECESSVNQ 780
Query: 137 EQERVVNKLMRKIEKLEAETDAKQNNLEQLRR 168
+E +VN+ R+I L + DA L+++ R
Sbjct: 781 LKETLVNR-DREINSLRRQLDAAHKELDEVGR 811
>sp|Q9US03|KLP2_SCHPO Kinesin-like protein 2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=klp2 PE=3 SV=1
Length = 817
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 145/316 (45%), Gaps = 58/316 (18%)
Query: 31 QKRIESLQQQNRVLKVELETYKLQLRALQEENKNLRQTSVNIQAKAEQEEEFISNTLMKK 90
QK +ESL+ ++ +++ Q A+ EEN + +Q +AE ++ F SN K
Sbjct: 235 QKGMESLE----IMLNSMKSENHQRMAMLEENHARVMETAELQHQAELQD-FASNIEQKA 289
Query: 91 ---IQALKKEKETLAHHYEQEEEFLTNDLSRKLNQLTEEKYRLEQTIEQ----EQERVVN 143
I K E ++ H+ + + LT++ K+++L EEK L + +++ +RV N
Sbjct: 290 NSLIMEYKNELQSAEEHFSHKIKELTSENELKISRLQEEKDSLLKKVQEGASLAMQRVQN 349
Query: 144 K-------LMRKIEKLEAETDAKQNNLEQLRREKVELENTLEQEQEALVNKLWKRMDKLE 196
K L I+ L+ E ++ + +EQL+RE + E +++ ++ +++ + KLE
Sbjct: 350 KHDLEKKRLQSAIQPLQEENNSLKQQIEQLQRE-LASETVVKENLKSSLDQQSANVQKLE 408
Query: 197 AEKRILQIKLDQPVSDPSSPHDMNNGDTASNLSTHIHSLRSEVMRLRNQLANTQQEHTEK 256
+ R L+ T L +++++++++ L L +
Sbjct: 409 STNRALE-------------------STIKTLEEDVYTMKNKIIELEGIL------KSAN 443
Query: 257 MERYVKDEKNVREENLRLQRKLQREVERREA----LCRH---LSESESS-LEMEEERHYN 308
+ER EK + EE LR RKL ++ + CR L + ES+ + ++ N
Sbjct: 444 VERDGLVEKLIAEETLR--RKLHNTIQELKGNIRVFCRVRPPLGDGESAQIAFPDQ---N 498
Query: 309 EIAHSMRLVGSSPSSS 324
A ++ +V +P SS
Sbjct: 499 SEASTIEIVAQAPGSS 514
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.123 0.326
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,777,526
Number of Sequences: 539616
Number of extensions: 5744542
Number of successful extensions: 61560
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 4092
Number of HSP's that attempted gapping in prelim test: 39353
Number of HSP's gapped (non-prelim): 14522
length of query: 393
length of database: 191,569,459
effective HSP length: 119
effective length of query: 274
effective length of database: 127,355,155
effective search space: 34895312470
effective search space used: 34895312470
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)