Query psy1596
Match_columns 375
No_of_seqs 320 out of 2767
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 17:25:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1596.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1596hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0628|consensus 100.0 1.6E-68 3.4E-73 526.2 18.6 276 2-375 40-315 (511)
2 PLN02590 probable tyrosine dec 100.0 2.5E-64 5.3E-69 522.3 24.6 266 2-375 97-367 (539)
3 PLN02880 tyrosine decarboxylas 100.0 6.2E-61 1.4E-65 494.4 23.2 265 3-375 50-319 (490)
4 PF00282 Pyridoxal_deC: Pyrido 100.0 4.9E-61 1.1E-65 480.1 19.4 269 2-375 6-274 (373)
5 TIGR03799 NOD_PanD_pyr putativ 100.0 1.2E-54 2.7E-59 449.7 23.6 275 5-375 59-345 (522)
6 TIGR03811 tyr_de_CO2_Ent tyros 100.0 2.2E-53 4.8E-58 444.8 23.5 252 25-375 64-395 (608)
7 KOG0629|consensus 100.0 5.2E-50 1.1E-54 391.6 16.7 260 3-374 70-332 (510)
8 PLN02263 serine decarboxylase 100.0 1.2E-47 2.6E-52 390.1 20.5 229 24-375 76-313 (470)
9 COG0076 GadB Glutamate decarbo 100.0 1.1E-45 2.4E-50 377.3 22.9 256 5-375 30-288 (460)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 1.8E-40 4E-45 337.2 22.1 251 5-375 14-273 (431)
11 PRK02769 histidine decarboxyla 100.0 5.3E-39 1.1E-43 322.0 19.7 216 42-375 20-243 (380)
12 PLN03032 serine decarboxylase; 100.0 7.2E-38 1.6E-42 312.8 19.0 220 42-375 22-246 (374)
13 cd06450 DOPA_deC_like DOPA dec 100.0 4.8E-34 1E-38 279.4 20.0 228 46-375 1-228 (345)
14 COG1104 NifS Cysteine sulfinat 99.9 1.1E-23 2.5E-28 208.3 16.0 169 160-375 43-214 (386)
15 PRK13520 L-tyrosine decarboxyl 99.9 4.6E-23 1E-27 203.7 19.8 182 152-375 50-232 (371)
16 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2E-22 4.3E-27 199.6 20.6 174 161-374 59-236 (373)
17 TIGR03531 selenium_SpcS O-phos 99.9 4.8E-22 1E-26 202.5 18.6 176 159-375 103-285 (444)
18 COG0520 csdA Selenocysteine ly 99.9 2.6E-21 5.6E-26 195.6 17.9 163 164-375 69-236 (405)
19 KOG1383|consensus 99.8 7E-21 1.5E-25 189.5 13.6 186 149-374 108-300 (491)
20 PLN02651 cysteine desulfurase 99.8 3.9E-20 8.5E-25 183.7 17.5 167 160-375 42-211 (364)
21 PRK05367 glycine dehydrogenase 99.8 2.7E-20 5.9E-25 204.5 17.4 178 154-372 535-712 (954)
22 TIGR00461 gcvP glycine dehydro 99.8 7E-20 1.5E-24 199.0 18.0 176 155-372 524-700 (939)
23 TIGR02006 IscS cysteine desulf 99.8 5.5E-19 1.2E-23 178.0 17.3 164 163-375 49-215 (402)
24 KOG1549|consensus 99.8 3.1E-19 6.7E-24 177.8 14.6 164 164-375 88-254 (428)
25 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 2.8E-18 6.1E-23 172.2 20.0 166 162-375 64-232 (387)
26 TIGR03402 FeS_nifS cysteine de 99.8 1.6E-18 3.5E-23 172.6 17.4 165 161-375 42-209 (379)
27 TIGR01977 am_tr_V_EF2568 cyste 99.8 2.4E-18 5.2E-23 170.6 17.1 164 161-375 44-211 (376)
28 PRK14012 cysteine desulfurase; 99.8 2.5E-18 5.5E-23 173.2 17.1 163 164-375 52-217 (404)
29 TIGR03235 DNA_S_dndA cysteine 99.8 3.1E-18 6.7E-23 169.0 17.1 167 161-375 42-211 (353)
30 cd06453 SufS_like Cysteine des 99.8 7.5E-18 1.6E-22 167.0 19.4 166 161-375 43-212 (373)
31 PRK04366 glycine dehydrogenase 99.8 7.5E-18 1.6E-22 174.2 17.5 172 156-372 108-280 (481)
32 PF00266 Aminotran_5: Aminotra 99.8 5.2E-17 1.1E-21 161.5 21.1 168 159-375 41-212 (371)
33 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 4.3E-17 9.3E-22 161.6 19.6 164 164-375 47-213 (361)
34 cd06451 AGAT_like Alanine-glyo 99.8 2.6E-17 5.7E-22 162.1 17.7 167 159-375 30-198 (356)
35 TIGR01979 sufS cysteine desulf 99.8 2.6E-17 5.5E-22 165.2 17.6 164 164-375 65-232 (403)
36 PF01212 Beta_elim_lyase: Beta 99.7 2.7E-17 5.8E-22 159.7 16.4 188 132-373 9-205 (290)
37 PRK02948 cysteine desulfurase; 99.7 3.7E-17 8.1E-22 163.0 17.2 166 161-375 43-211 (381)
38 cd00615 Orn_deC_like Ornithine 99.7 2.1E-17 4.6E-22 160.0 14.3 164 164-374 62-231 (294)
39 PLN02414 glycine dehydrogenase 99.7 3.5E-17 7.5E-22 179.9 17.3 171 156-371 563-737 (993)
40 COG2008 GLY1 Threonine aldolas 99.7 1.7E-17 3.7E-22 161.7 13.2 193 127-373 9-210 (342)
41 TIGR03403 nifS_epsilon cystein 99.7 5.4E-17 1.2E-21 162.0 17.2 150 200-375 61-213 (382)
42 PRK00451 glycine dehydrogenase 99.7 5.4E-17 1.2E-21 165.6 17.0 161 158-374 109-280 (447)
43 PRK09295 bifunctional cysteine 99.7 6E-17 1.3E-21 163.2 16.9 165 163-375 69-237 (406)
44 TIGR03392 FeS_syn_CsdA cystein 99.7 8.8E-17 1.9E-21 161.3 17.5 164 164-375 63-230 (398)
45 cd00613 GDC-P Glycine cleavage 99.7 1.4E-16 3.1E-21 159.2 18.2 170 152-372 55-229 (398)
46 cd01494 AAT_I Aspartate aminot 99.7 1.2E-16 2.6E-21 138.9 14.9 163 164-375 3-168 (170)
47 PRK10874 cysteine sulfinate de 99.7 1.5E-16 3.2E-21 159.9 17.4 165 163-375 65-233 (401)
48 TIGR02326 transamin_PhnW 2-ami 99.7 6E-16 1.3E-20 153.3 17.6 165 164-375 38-203 (363)
49 TIGR02539 SepCysS Sep-tRNA:Cys 99.7 1.7E-15 3.6E-20 151.2 20.0 163 164-374 54-219 (370)
50 PLN02855 Bifunctional selenocy 99.7 9.1E-16 2E-20 155.6 17.8 164 164-375 79-246 (424)
51 PLN02409 serine--glyoxylate am 99.7 9.8E-16 2.1E-20 154.7 17.0 169 160-375 41-213 (401)
52 PRK12566 glycine dehydrogenase 99.7 2.1E-15 4.5E-20 163.7 18.1 178 156-375 538-716 (954)
53 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 5.2E-15 1.1E-19 144.9 18.8 166 163-375 33-199 (355)
54 PLN02721 threonine aldolase 99.7 2.5E-15 5.4E-20 147.4 16.4 166 164-371 43-216 (353)
55 cd06502 TA_like Low-specificit 99.7 1.1E-15 2.3E-20 149.2 13.5 162 164-371 35-204 (338)
56 TIGR01976 am_tr_V_VC1184 cyste 99.6 4.6E-15 1E-19 148.4 17.6 167 158-375 57-228 (397)
57 PTZ00094 serine hydroxymethylt 99.6 4.1E-15 8.8E-20 152.6 14.4 165 159-373 78-255 (452)
58 TIGR01437 selA_rel uncharacter 99.6 2.4E-14 5.2E-19 143.0 17.4 173 159-375 43-220 (363)
59 PRK13479 2-aminoethylphosphona 99.6 3.3E-14 7.1E-19 141.0 17.5 165 163-375 39-205 (368)
60 TIGR01814 kynureninase kynuren 99.6 2.5E-14 5.4E-19 144.4 15.4 148 200-372 87-242 (406)
61 cd00609 AAT_like Aspartate ami 99.6 9.6E-14 2.1E-18 134.5 18.5 175 156-374 35-216 (350)
62 KOG1368|consensus 99.6 7.3E-15 1.6E-19 139.8 10.1 177 144-373 47-235 (384)
63 TIGR01822 2am3keto_CoA 2-amino 99.6 9.8E-14 2.1E-18 138.7 18.6 194 127-374 54-250 (393)
64 cd06454 KBL_like KBL_like; thi 99.6 1.9E-13 4.2E-18 133.7 20.2 187 128-368 18-207 (349)
65 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 1E-14 2.2E-19 147.3 11.0 166 164-374 69-251 (417)
66 cd00616 AHBA_syn 3-amino-5-hyd 99.6 1.1E-13 2.4E-18 135.7 17.0 152 164-370 21-175 (352)
67 PRK07179 hypothetical protein; 99.6 1.6E-13 3.4E-18 138.5 18.4 158 162-374 100-260 (407)
68 PLN02724 Molybdenum cofactor s 99.6 3.2E-14 6.9E-19 155.6 14.0 170 163-375 80-274 (805)
69 PRK13238 tnaA tryptophanase/L- 99.5 1.9E-13 4.1E-18 140.7 17.9 164 164-374 81-270 (460)
70 PRK08361 aspartate aminotransf 99.5 1.9E-13 4E-18 137.2 16.4 168 157-368 70-242 (391)
71 PRK05937 8-amino-7-oxononanoat 99.5 1.3E-12 2.9E-17 130.4 20.5 202 125-375 18-223 (370)
72 PRK06939 2-amino-3-ketobutyrat 99.5 7E-13 1.5E-17 132.1 18.0 174 153-374 79-254 (397)
73 COG0156 BioF 7-keto-8-aminopel 99.5 7.6E-13 1.6E-17 132.9 17.9 186 128-366 56-245 (388)
74 PLN03226 serine hydroxymethylt 99.5 5.1E-13 1.1E-17 138.0 15.3 167 158-373 77-256 (475)
75 PRK15029 arginine decarboxylas 99.5 4.6E-13 1E-17 144.1 15.4 168 164-374 208-397 (755)
76 COG0436 Aspartate/tyrosine/aro 99.5 1.1E-12 2.5E-17 132.4 16.8 166 122-338 37-209 (393)
77 cd00378 SHMT Serine-glycine hy 99.5 5E-13 1.1E-17 134.1 14.0 166 158-374 62-235 (402)
78 PRK00011 glyA serine hydroxyme 99.4 7.9E-13 1.7E-17 133.6 13.7 165 159-374 69-239 (416)
79 PRK11658 UDP-4-amino-4-deoxy-L 99.4 2.1E-12 4.5E-17 129.6 16.6 152 164-369 36-188 (379)
80 PRK08134 O-acetylhomoserine am 99.4 2E-12 4.4E-17 132.1 16.7 146 164-369 67-216 (433)
81 PRK06108 aspartate aminotransf 99.4 2E-12 4.3E-17 128.7 16.2 173 157-374 61-244 (382)
82 TIGR03588 PseC UDP-4-keto-6-de 99.4 2.8E-12 6.1E-17 128.3 16.9 161 164-373 32-195 (380)
83 PRK09082 methionine aminotrans 99.4 3.5E-12 7.6E-17 127.8 16.5 168 157-368 67-241 (386)
84 TIGR01329 cysta_beta_ly_E cyst 99.4 4E-12 8.6E-17 127.8 16.3 150 164-374 50-205 (378)
85 COG1003 GcvP Glycine cleavage 99.4 3.5E-12 7.7E-17 126.9 14.6 169 156-372 104-276 (496)
86 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.4 5.9E-12 1.3E-16 126.1 16.4 156 161-371 31-189 (375)
87 PRK08912 hypothetical protein; 99.4 6.8E-12 1.5E-16 125.6 16.4 174 157-374 63-244 (387)
88 TIGR02379 ECA_wecE TDP-4-keto- 99.4 6.3E-12 1.4E-16 126.3 16.1 128 162-339 32-160 (376)
89 cd00617 Tnase_like Tryptophana 99.4 6.1E-12 1.3E-16 128.5 15.9 161 164-370 56-242 (431)
90 PLN02376 1-aminocyclopropane-1 99.4 1E-11 2.3E-16 129.0 17.9 181 156-374 93-291 (496)
91 PRK08133 O-succinylhomoserine 99.4 1.7E-11 3.6E-16 123.7 18.7 146 164-369 64-213 (390)
92 PRK03080 phosphoserine aminotr 99.4 2.1E-12 4.5E-17 129.6 12.1 152 164-375 51-206 (378)
93 PRK05958 8-amino-7-oxononanoat 99.4 2.8E-11 6E-16 120.0 20.0 160 157-367 80-243 (385)
94 COG1103 Archaea-specific pyrid 99.4 1.3E-11 2.8E-16 116.5 16.4 163 164-374 64-229 (382)
95 PRK10534 L-threonine aldolase; 99.4 8.9E-12 1.9E-16 122.0 15.9 160 164-370 37-204 (333)
96 PRK05764 aspartate aminotransf 99.4 1E-11 2.2E-16 124.3 16.6 168 157-368 68-243 (393)
97 PRK05957 aspartate aminotransf 99.4 1.9E-11 4.1E-16 122.8 18.6 139 157-338 65-206 (389)
98 TIGR02618 tyr_phenol_ly tyrosi 99.4 1.2E-11 2.6E-16 125.8 16.7 173 147-373 65-263 (450)
99 PRK06207 aspartate aminotransf 99.4 4.3E-11 9.3E-16 121.1 20.7 167 157-368 78-256 (405)
100 PRK12414 putative aminotransfe 99.4 9.6E-12 2.1E-16 124.7 15.9 168 157-368 66-240 (384)
101 PRK07777 aminotransferase; Val 99.4 1.4E-11 2.9E-16 123.5 16.9 168 157-368 61-237 (387)
102 PLN02368 alanine transaminase 99.4 1.4E-11 3.1E-16 125.0 17.2 145 157-338 107-256 (407)
103 PRK05613 O-acetylhomoserine am 99.4 1.3E-11 2.8E-16 126.4 16.7 146 164-368 72-221 (437)
104 cd00614 CGS_like CGS_like: Cys 99.4 1.4E-11 3.1E-16 123.1 16.2 146 164-369 43-192 (369)
105 PRK06225 aspartate aminotransf 99.4 1.9E-11 4.1E-16 122.1 17.0 162 164-374 69-237 (380)
106 PLN02656 tyrosine transaminase 99.4 2.4E-11 5.3E-16 122.9 17.9 138 157-338 73-215 (409)
107 PTZ00377 alanine aminotransfer 99.4 1.8E-11 3.9E-16 126.6 17.2 144 157-337 115-263 (481)
108 PRK13237 tyrosine phenol-lyase 99.4 1.3E-11 2.7E-16 126.0 15.5 177 143-373 68-270 (460)
109 TIGR01825 gly_Cac_T_rel pyrido 99.4 2.6E-11 5.7E-16 120.7 17.4 163 155-368 72-238 (385)
110 PRK13034 serine hydroxymethylt 99.4 1.4E-11 3.1E-16 125.3 15.7 164 159-373 72-241 (416)
111 COG0399 WecE Predicted pyridox 99.4 2.8E-11 6E-16 121.0 17.0 156 164-374 37-194 (374)
112 TIGR01141 hisC histidinol-phos 99.3 2.7E-11 5.9E-16 119.0 16.8 163 164-374 57-222 (346)
113 PRK08574 cystathionine gamma-s 99.3 2.5E-11 5.3E-16 122.4 16.8 147 164-370 56-205 (385)
114 PRK13392 5-aminolevulinate syn 99.3 8.5E-11 1.8E-15 118.8 20.7 196 121-369 56-254 (410)
115 PRK07682 hypothetical protein; 99.3 3E-11 6.6E-16 120.5 16.9 167 157-368 57-231 (378)
116 PLN00175 aminotransferase fami 99.3 6.2E-11 1.4E-15 120.3 19.4 167 157-368 91-264 (413)
117 PRK15399 lysine decarboxylase 99.3 2.3E-11 5.1E-16 129.9 16.7 165 164-374 198-378 (713)
118 PRK08960 hypothetical protein; 99.3 2.7E-11 5.9E-16 121.4 16.2 165 157-367 69-238 (387)
119 TIGR01324 cysta_beta_ly_B cyst 99.3 2.5E-11 5.4E-16 122.1 15.8 147 164-370 53-203 (377)
120 TIGR01328 met_gam_lyase methio 99.3 3E-11 6.5E-16 122.0 16.5 147 164-370 62-212 (391)
121 TIGR03537 DapC succinyldiamino 99.3 5.1E-11 1.1E-15 117.8 17.7 169 157-368 36-211 (350)
122 PRK15400 lysine decarboxylase 99.3 1.8E-11 4E-16 130.7 15.0 164 164-373 198-377 (714)
123 PRK07337 aminotransferase; Val 99.3 3.3E-11 7.3E-16 120.7 16.1 165 157-368 67-237 (388)
124 PLN02187 rooty/superroot1 99.3 6.1E-11 1.3E-15 122.3 18.3 138 157-338 108-250 (462)
125 PRK07309 aromatic amino acid a 99.3 5.4E-11 1.2E-15 119.5 17.4 172 157-368 67-242 (391)
126 PRK08861 cystathionine gamma-s 99.3 4.7E-11 1E-15 120.6 16.9 147 164-370 56-206 (388)
127 PLN02955 8-amino-7-oxononanoat 99.3 1.7E-10 3.6E-15 118.7 20.9 197 128-368 119-324 (476)
128 PRK00950 histidinol-phosphate 99.3 6.5E-11 1.4E-15 117.0 17.3 156 164-368 72-228 (361)
129 PRK13578 ornithine decarboxyla 99.3 2.4E-11 5.3E-16 129.9 15.2 168 164-374 177-366 (720)
130 PRK07681 aspartate aminotransf 99.3 5.4E-11 1.2E-15 119.8 16.9 138 157-338 69-212 (399)
131 TIGR01326 OAH_OAS_sulfhy OAH/O 99.3 4.3E-11 9.3E-16 121.8 16.2 145 164-368 60-208 (418)
132 PLN02483 serine palmitoyltrans 99.3 6.3E-11 1.4E-15 123.0 17.7 168 152-367 137-315 (489)
133 PRK07811 cystathionine gamma-s 99.3 5.6E-11 1.2E-15 119.9 16.8 147 164-370 64-214 (388)
134 TIGR01821 5aminolev_synth 5-am 99.3 1.6E-10 3.4E-15 116.5 19.9 192 125-369 59-253 (402)
135 PLN00145 tyrosine/nicotianamin 99.3 5.6E-11 1.2E-15 121.3 16.9 138 157-338 94-236 (430)
136 PRK05942 aspartate aminotransf 99.3 5.2E-11 1.1E-15 119.7 16.4 173 157-374 73-255 (394)
137 PRK04311 selenocysteine syntha 99.3 4.2E-11 9E-16 123.4 15.9 158 164-375 130-304 (464)
138 PRK07050 cystathionine beta-ly 99.3 4.8E-11 1E-15 120.6 16.1 147 164-370 68-218 (394)
139 PLN02242 methionine gamma-lyas 99.3 5.8E-11 1.2E-15 121.0 16.7 147 164-370 79-230 (418)
140 PLN02509 cystathionine beta-ly 99.3 3.6E-11 7.9E-16 123.8 15.4 152 162-374 134-291 (464)
141 PRK07550 hypothetical protein; 99.3 8.4E-11 1.8E-15 117.7 17.6 173 157-373 67-247 (386)
142 PLN02231 alanine transaminase 99.3 6.1E-11 1.3E-15 124.3 17.3 145 157-338 168-317 (534)
143 PF00155 Aminotran_1_2: Aminot 99.3 2.9E-11 6.3E-16 119.2 13.9 174 158-368 45-226 (363)
144 PRK06767 methionine gamma-lyas 99.3 7.6E-11 1.6E-15 118.8 17.1 147 164-370 64-214 (386)
145 PLN03227 serine palmitoyltrans 99.3 2.1E-10 4.6E-15 115.8 20.3 190 128-370 15-216 (392)
146 PF01041 DegT_DnrJ_EryC1: DegT 99.3 6.3E-11 1.4E-15 118.2 16.1 147 164-365 28-177 (363)
147 PRK05994 O-acetylhomoserine am 99.3 7E-11 1.5E-15 120.7 16.8 147 164-370 66-216 (427)
148 PRK07503 methionine gamma-lyas 99.3 6.6E-11 1.4E-15 119.9 16.4 151 164-374 68-224 (403)
149 PRK08363 alanine aminotransfer 99.3 5.9E-11 1.3E-15 119.4 15.8 172 157-374 70-249 (398)
150 TIGR01325 O_suc_HS_sulf O-succ 99.3 7.8E-11 1.7E-15 118.4 16.6 146 164-369 57-206 (380)
151 PTZ00433 tyrosine aminotransfe 99.3 1.4E-10 3.1E-15 117.4 18.7 142 158-337 76-222 (412)
152 PRK08064 cystathionine beta-ly 99.3 6.4E-11 1.4E-15 119.5 16.1 150 164-374 57-212 (390)
153 PRK05939 hypothetical protein; 99.3 6.3E-11 1.4E-15 119.9 16.0 145 164-368 50-197 (397)
154 PRK08776 cystathionine gamma-s 99.3 8.9E-11 1.9E-15 119.2 17.2 147 164-370 63-213 (405)
155 TIGR01265 tyr_nico_aTase tyros 99.3 1.3E-10 2.8E-15 117.3 18.3 114 200-338 97-215 (403)
156 PRK06836 aspartate aminotransf 99.3 2.2E-10 4.9E-15 115.2 19.7 172 157-373 73-255 (394)
157 PRK07810 O-succinylhomoserine 99.3 9.7E-11 2.1E-15 118.8 17.2 146 164-369 73-222 (403)
158 PRK08248 O-acetylhomoserine am 99.3 8.6E-11 1.9E-15 120.2 16.9 146 164-369 67-216 (431)
159 TIGR00474 selA seryl-tRNA(sec) 99.3 6.1E-11 1.3E-15 121.9 15.8 158 164-375 125-299 (454)
160 PRK07812 O-acetylhomoserine am 99.3 7.7E-11 1.7E-15 120.7 16.2 146 164-368 72-221 (436)
161 PRK08249 cystathionine gamma-s 99.3 7.3E-11 1.6E-15 119.5 15.9 146 164-369 67-216 (398)
162 PRK06348 aspartate aminotransf 99.3 1E-10 2.2E-15 117.2 16.7 167 157-368 66-239 (384)
163 TIGR00858 bioF 8-amino-7-oxono 99.3 1.5E-10 3.3E-15 113.3 17.4 157 161-367 61-221 (360)
164 PRK07324 transaminase; Validat 99.3 5.4E-11 1.2E-15 119.0 14.4 142 200-368 81-227 (373)
165 PRK05968 hypothetical protein; 99.3 1.1E-10 2.4E-15 117.8 16.8 150 164-374 66-221 (389)
166 TIGR03540 DapC_direct LL-diami 99.3 9.1E-11 2E-15 117.2 16.0 167 157-368 67-242 (383)
167 PRK07504 O-succinylhomoserine 99.3 8.9E-11 1.9E-15 118.8 16.0 146 164-369 68-217 (398)
168 PRK09064 5-aminolevulinate syn 99.3 4.4E-10 9.6E-15 113.3 21.0 190 126-368 61-253 (407)
169 PRK06234 methionine gamma-lyas 99.3 1.4E-10 3.1E-15 117.4 17.4 147 164-370 67-219 (400)
170 PRK13580 serine hydroxymethylt 99.3 7.4E-11 1.6E-15 121.6 15.3 188 157-374 91-296 (493)
171 PRK08636 aspartate aminotransf 99.3 1.7E-10 3.7E-15 116.4 17.5 144 157-338 71-221 (403)
172 PRK15407 lipopolysaccharide bi 99.3 1.2E-10 2.7E-15 119.3 16.5 135 164-340 66-201 (438)
173 PLN02822 serine palmitoyltrans 99.3 3.4E-10 7.4E-15 117.3 19.9 187 127-366 125-319 (481)
174 PRK08045 cystathionine gamma-s 99.3 1.5E-10 3.3E-15 116.7 16.8 147 164-370 55-205 (386)
175 PRK13355 bifunctional HTH-doma 99.3 9.1E-11 2E-15 122.4 15.7 137 157-337 185-326 (517)
176 PRK09028 cystathionine beta-ly 99.3 1.1E-10 2.5E-15 117.9 15.9 132 201-369 78-213 (394)
177 PRK08114 cystathionine beta-ly 99.2 1.7E-10 3.6E-15 116.7 16.2 150 164-373 65-222 (395)
178 PRK06107 aspartate aminotransf 99.2 1.5E-10 3.3E-15 116.7 16.0 137 157-337 70-212 (402)
179 PLN02450 1-aminocyclopropane-1 99.2 1.9E-10 4E-15 118.8 16.9 145 157-337 86-236 (468)
180 PRK08068 transaminase; Reviewe 99.2 1.7E-10 3.8E-15 115.7 16.0 168 157-368 70-245 (389)
181 PLN02271 serine hydroxymethylt 99.2 1.1E-10 2.4E-15 121.2 14.9 169 159-374 192-372 (586)
182 PRK07683 aminotransferase A; V 99.2 4.8E-10 1E-14 112.5 19.0 167 157-368 65-238 (387)
183 PRK09276 LL-diaminopimelate am 99.2 2.2E-10 4.7E-15 114.6 16.4 167 157-368 69-244 (385)
184 PRK13393 5-aminolevulinate syn 99.2 9.5E-10 2.1E-14 111.1 20.7 188 128-368 62-252 (406)
185 TIGR02617 tnaA_trp_ase tryptop 99.2 7.1E-11 1.5E-15 119.7 12.3 185 145-373 66-276 (467)
186 KOG0257|consensus 99.2 2E-10 4.3E-15 114.2 15.0 167 122-337 40-217 (420)
187 PLN02607 1-aminocyclopropane-1 99.2 2.4E-10 5.1E-15 117.5 16.3 146 157-338 95-246 (447)
188 PRK09265 aminotransferase AlaT 99.2 2.2E-10 4.8E-15 115.5 15.8 114 199-337 95-213 (404)
189 PLN00143 tyrosine/nicotianamin 99.2 2.7E-10 5.9E-15 115.4 16.4 138 157-338 74-216 (409)
190 cd00610 OAT_like Acetyl ornith 99.2 3.3E-10 7.2E-15 113.7 16.9 173 159-374 77-271 (413)
191 TIGR02080 O_succ_thio_ly O-suc 99.2 3.1E-10 6.7E-15 114.3 16.1 147 164-370 54-204 (382)
192 PRK09147 succinyldiaminopimela 99.2 2.3E-10 5E-15 115.0 15.0 141 157-338 65-212 (396)
193 PRK06290 aspartate aminotransf 99.2 3.7E-10 8E-15 114.6 16.5 167 157-368 81-256 (410)
194 PRK06176 cystathionine gamma-s 99.2 3.5E-10 7.5E-15 113.9 16.1 146 164-370 53-202 (380)
195 PRK03317 histidinol-phosphate 99.2 3.9E-10 8.5E-15 112.2 16.3 166 158-368 66-233 (368)
196 PRK07671 cystathionine beta-ly 99.2 4.2E-10 9.1E-15 113.2 16.6 146 164-370 53-202 (377)
197 PRK06084 O-acetylhomoserine am 99.2 5.6E-10 1.2E-14 114.0 17.2 146 164-369 61-210 (425)
198 PRK07366 succinyldiaminopimela 99.2 3.4E-10 7.4E-15 113.4 15.2 168 157-368 68-244 (388)
199 PRK14807 histidinol-phosphate 99.2 1.2E-09 2.6E-14 108.2 18.9 157 164-368 62-218 (351)
200 PRK07568 aspartate aminotransf 99.2 5.4E-10 1.2E-14 112.0 16.3 172 157-373 66-246 (397)
201 PRK09148 aminotransferase; Val 99.2 6E-10 1.3E-14 112.7 16.4 169 157-368 68-243 (405)
202 PRK06855 aminotransferase; Val 99.2 1.1E-09 2.4E-14 111.8 18.5 167 157-368 73-248 (433)
203 TIGR01264 tyr_amTase_E tyrosin 99.2 1.2E-09 2.6E-14 110.0 17.8 137 157-338 73-214 (401)
204 PRK08247 cystathionine gamma-s 99.2 6.7E-10 1.4E-14 111.1 15.6 146 164-370 55-204 (366)
205 TIGR03576 pyridox_MJ0158 pyrid 99.2 7.7E-10 1.7E-14 110.1 15.6 153 158-369 51-210 (346)
206 PRK08175 aminotransferase; Val 99.2 1.3E-09 2.8E-14 109.6 17.4 169 157-368 67-242 (395)
207 PRK04870 histidinol-phosphate 99.1 1.6E-09 3.5E-14 107.2 17.2 154 164-364 66-219 (356)
208 PRK05387 histidinol-phosphate 99.1 1.9E-09 4E-14 106.3 17.6 152 164-368 63-215 (353)
209 PRK06702 O-acetylhomoserine am 99.1 1.3E-09 2.7E-14 111.6 16.8 148 164-370 64-215 (432)
210 PRK09257 aromatic amino acid a 99.1 2E-09 4.4E-14 108.3 17.4 171 157-367 69-250 (396)
211 PRK08056 threonine-phosphate d 99.1 2.1E-09 4.6E-14 106.6 17.2 155 164-368 58-217 (356)
212 TIGR03538 DapC_gpp succinyldia 99.1 8.9E-10 1.9E-14 110.7 14.7 142 157-338 64-211 (393)
213 PRK03244 argD acetylornithine 99.1 2.9E-09 6.4E-14 107.0 17.9 160 164-374 88-263 (398)
214 cd00611 PSAT_like Phosphoserin 99.1 2.2E-10 4.7E-15 114.1 9.6 158 161-375 44-204 (355)
215 PRK03321 putative aminotransfe 99.1 1.5E-09 3.3E-14 107.1 15.3 129 164-338 60-190 (352)
216 PRK03158 histidinol-phosphate 99.1 2.5E-09 5.3E-14 105.9 16.8 162 164-373 67-233 (359)
217 PRK09105 putative aminotransfe 99.1 4.2E-09 9.1E-14 105.4 18.0 160 164-373 81-244 (370)
218 PRK02731 histidinol-phosphate 99.1 2.1E-09 4.4E-14 106.7 15.3 162 164-374 70-237 (367)
219 PRK06460 hypothetical protein; 99.1 2.9E-09 6.2E-14 107.1 16.1 145 164-368 48-196 (376)
220 PRK07269 cystathionine gamma-s 99.1 1.4E-09 3.1E-14 108.9 13.7 149 164-373 57-209 (364)
221 PRK01688 histidinol-phosphate 99.1 3.2E-09 6.9E-14 105.3 15.6 156 164-368 60-218 (351)
222 PTZ00376 aspartate aminotransf 99.1 3.6E-09 7.8E-14 106.9 16.2 173 157-368 72-256 (404)
223 PRK05166 histidinol-phosphate 99.1 3.7E-09 8.1E-14 105.5 16.0 157 165-367 75-235 (371)
224 PRK15481 transcriptional regul 99.1 2.5E-09 5.5E-14 108.8 14.4 138 201-366 143-285 (431)
225 PRK07582 cystathionine gamma-l 99.0 4.2E-09 9.1E-14 105.4 15.5 144 164-371 54-201 (366)
226 TIGR01140 L_thr_O3P_dcar L-thr 99.0 5E-09 1.1E-13 103.0 15.3 153 164-374 50-206 (330)
227 PRK05367 glycine dehydrogenase 99.0 4.7E-09 1E-13 116.4 16.5 157 157-375 117-283 (954)
228 COG0075 Serine-pyruvate aminot 99.0 1.1E-08 2.3E-13 102.6 17.5 163 163-374 40-204 (383)
229 PRK05967 cystathionine beta-ly 99.0 5.6E-09 1.2E-13 105.7 15.5 144 164-367 67-214 (395)
230 COG1167 ARO8 Transcriptional r 99.0 4.2E-09 9.2E-14 108.6 14.9 172 157-373 132-309 (459)
231 PLN03026 histidinol-phosphate 99.0 8.8E-09 1.9E-13 103.4 16.4 156 164-367 89-244 (380)
232 PRK01533 histidinol-phosphate 99.0 5.2E-09 1.1E-13 104.6 14.6 156 164-368 67-227 (366)
233 KOG0630|consensus 99.0 1.2E-09 2.6E-14 110.1 8.4 129 241-370 230-368 (838)
234 TIGR01366 serC_3 phosphoserine 99.0 7.9E-10 1.7E-14 110.5 6.8 147 164-373 44-195 (361)
235 PRK03967 histidinol-phosphate 99.0 3.2E-08 6.9E-13 97.7 17.7 152 164-368 58-209 (337)
236 KOG0256|consensus 99.0 1E-08 2.2E-13 101.8 13.8 177 156-368 120-308 (471)
237 TIGR01364 serC_1 phosphoserine 99.0 3.4E-09 7.4E-14 105.6 10.6 155 161-375 37-196 (349)
238 PRK05355 3-phosphoserine/phosp 99.0 2.1E-09 4.6E-14 107.4 9.1 157 161-375 48-207 (360)
239 PF05889 SLA_LP_auto_ag: Solub 99.0 3.7E-09 8.1E-14 105.4 10.6 168 164-374 59-234 (389)
240 PRK04635 histidinol-phosphate 99.0 1.2E-08 2.6E-13 101.1 14.3 153 164-366 63-217 (354)
241 PRK00854 rocD ornithine--oxo-a 98.9 2.6E-08 5.6E-13 100.3 16.7 159 164-368 86-261 (401)
242 PLN02672 methionine S-methyltr 98.9 2.4E-08 5.1E-13 111.2 17.7 134 161-337 734-874 (1082)
243 PRK05839 hypothetical protein; 98.9 1E-08 2.2E-13 102.6 13.5 135 158-337 61-200 (374)
244 PRK07908 hypothetical protein; 98.9 3E-08 6.5E-13 98.0 16.5 154 164-374 61-216 (349)
245 TIGR03801 asp_4_decarbox aspar 98.9 3.1E-08 6.6E-13 103.5 16.8 145 201-368 157-315 (521)
246 PRK08637 hypothetical protein; 98.9 5.4E-08 1.2E-12 97.8 17.9 143 157-338 44-197 (388)
247 PRK06358 threonine-phosphate d 98.9 7.6E-08 1.7E-12 95.6 18.6 138 200-366 72-216 (354)
248 PRK04073 rocD ornithine--oxo-a 98.9 4.3E-08 9.4E-13 98.8 16.3 165 164-373 85-266 (396)
249 PRK09275 aspartate aminotransf 98.9 4.1E-08 8.9E-13 102.7 16.2 145 201-368 163-316 (527)
250 PTZ00125 ornithine aminotransf 98.9 8.1E-08 1.8E-12 96.5 17.9 167 164-374 76-259 (400)
251 TIGR01885 Orn_aminotrans ornit 98.9 1.1E-07 2.4E-12 95.9 18.7 164 162-368 80-260 (401)
252 TIGR03539 DapC_actino succinyl 98.9 3.2E-08 7E-13 98.2 14.6 128 157-337 56-187 (357)
253 PRK06434 cystathionine gamma-l 98.9 4E-08 8.6E-13 99.2 15.1 148 164-374 67-220 (384)
254 PRK02610 histidinol-phosphate 98.9 6.6E-08 1.4E-12 96.7 16.4 169 158-368 67-239 (374)
255 PRK07865 N-succinyldiaminopime 98.9 3.8E-08 8.2E-13 97.8 14.3 159 157-368 62-228 (364)
256 TIGR00707 argD acetylornithine 98.9 6.2E-08 1.3E-12 96.3 15.7 170 162-374 70-250 (379)
257 PRK07505 hypothetical protein; 98.8 8.3E-08 1.8E-12 96.9 16.3 161 160-368 90-256 (402)
258 COG1982 LdcC Arginine/lysine/o 98.8 6.3E-08 1.4E-12 100.6 15.3 164 164-373 73-242 (557)
259 COG1168 MalY Bifunctional PLP- 98.8 9.4E-08 2E-12 94.5 15.6 133 162-337 65-203 (388)
260 PRK08153 histidinol-phosphate 98.8 9E-08 2E-12 95.6 15.8 157 164-368 70-228 (369)
261 PRK08354 putative aminotransfe 98.8 4.6E-08 1E-12 95.4 12.7 142 164-368 43-187 (311)
262 PF00464 SHMT: Serine hydroxym 98.8 4.5E-08 9.7E-13 98.9 12.8 164 159-371 64-240 (399)
263 COG0112 GlyA Glycine/serine hy 98.8 2.9E-08 6.3E-13 98.4 10.7 166 158-374 69-240 (413)
264 TIGR03246 arg_catab_astC succi 98.8 1.8E-07 3.8E-12 94.6 16.6 163 163-372 79-257 (397)
265 PLN02397 aspartate transaminas 98.8 9.3E-08 2E-12 97.5 14.6 95 241-338 141-240 (423)
266 PRK07590 L,L-diaminopimelate a 98.8 9.2E-08 2E-12 96.8 14.3 162 157-368 76-254 (409)
267 PLN02414 glycine dehydrogenase 98.8 1.3E-07 2.8E-12 105.1 15.4 159 157-375 144-311 (993)
268 PRK14809 histidinol-phosphate 98.8 4.7E-07 1E-11 89.8 18.0 145 200-373 83-233 (357)
269 PRK04781 histidinol-phosphate 98.8 3.5E-07 7.6E-12 91.2 17.1 158 164-368 62-225 (364)
270 PRK01278 argD acetylornithine 98.7 1.9E-07 4.2E-12 93.6 14.6 170 162-373 74-254 (389)
271 PRK06425 histidinol-phosphate 98.7 1.9E-07 4.2E-12 91.8 14.3 151 164-368 43-198 (332)
272 PRK07049 methionine gamma-lyas 98.7 6.9E-07 1.5E-11 91.5 18.8 150 164-367 86-245 (427)
273 PRK02936 argD acetylornithine 98.7 3.5E-07 7.7E-12 91.2 16.3 161 160-373 70-246 (377)
274 PRK02627 acetylornithine amino 98.7 2.4E-07 5.2E-12 92.8 15.1 172 160-374 80-262 (396)
275 KOG0259|consensus 98.7 1.7E-07 3.8E-12 92.4 13.2 117 198-339 125-246 (447)
276 PRK03715 argD acetylornithine 98.7 3.5E-07 7.6E-12 92.6 15.7 154 201-374 95-259 (395)
277 KOG2040|consensus 98.7 2.1E-07 4.6E-12 96.7 14.1 172 157-372 578-752 (1001)
278 PRK07392 threonine-phosphate d 98.7 5.7E-07 1.2E-11 89.3 16.9 140 200-368 75-221 (360)
279 PRK09440 avtA valine--pyruvate 98.7 1E-07 2.3E-12 96.3 11.4 139 157-336 74-223 (416)
280 PRK05093 argD bifunctional N-s 98.7 9.3E-07 2E-11 89.3 17.4 130 163-337 84-230 (403)
281 PLN02624 ornithine-delta-amino 98.7 1.4E-06 3E-11 90.3 18.8 168 164-373 120-304 (474)
282 PF01053 Cys_Met_Meta_PP: Cys/ 98.6 8.7E-07 1.9E-11 89.6 16.3 145 164-368 58-207 (386)
283 PRK04260 acetylornithine amino 98.6 8.9E-07 1.9E-11 88.5 14.4 147 202-373 87-244 (375)
284 PRK12381 bifunctional succinyl 98.6 1.8E-06 3.9E-11 87.5 16.2 162 164-373 84-262 (406)
285 PF02347 GDC-P: Glycine cleava 98.6 1.6E-06 3.4E-11 88.3 15.6 156 157-373 106-267 (429)
286 KOG1359|consensus 98.5 3.4E-07 7.4E-12 87.8 9.3 162 152-367 103-267 (417)
287 TIGR03542 DAPAT_plant LL-diami 98.5 2E-06 4.3E-11 86.8 15.5 109 200-337 96-218 (402)
288 COG0079 HisC Histidinol-phosph 98.5 4.6E-06 9.9E-11 83.5 17.3 130 164-339 60-191 (356)
289 PRK14808 histidinol-phosphate 98.5 2.6E-06 5.7E-11 84.1 15.1 131 200-368 77-207 (335)
290 COG2873 MET17 O-acetylhomoseri 98.5 3E-06 6.5E-11 83.8 14.3 131 200-367 78-212 (426)
291 KOG1360|consensus 98.5 3E-06 6.5E-11 84.3 13.7 192 121-366 181-376 (570)
292 KOG1357|consensus 98.4 4.4E-07 9.4E-12 91.3 7.4 141 152-339 173-320 (519)
293 PRK05664 threonine-phosphate d 98.4 2.9E-06 6.3E-11 83.5 12.9 127 201-368 66-197 (330)
294 KOG2862|consensus 98.4 6.2E-06 1.3E-10 79.8 14.1 123 241-374 91-216 (385)
295 PRK05964 adenosylmethionine--8 98.4 9.6E-06 2.1E-10 82.7 15.9 158 201-374 104-281 (423)
296 PRK08117 4-aminobutyrate amino 98.4 1.6E-05 3.6E-10 81.3 17.3 172 161-373 86-286 (433)
297 PRK09264 diaminobutyrate--2-ox 98.3 4.5E-05 9.8E-10 78.0 19.7 153 202-373 105-278 (425)
298 PRK12403 putative aminotransfe 98.3 2.4E-05 5.2E-10 80.9 17.8 171 159-366 96-294 (460)
299 KOG0258|consensus 98.3 7.2E-06 1.6E-10 81.4 13.0 143 157-337 113-260 (475)
300 PRK06959 putative threonine-ph 98.3 5.9E-06 1.3E-10 81.8 12.6 145 164-368 56-203 (339)
301 PLN02760 4-aminobutyrate:pyruv 98.3 2.9E-05 6.3E-10 81.2 18.3 152 201-367 153-333 (504)
302 PRK05769 4-aminobutyrate amino 98.3 4.8E-05 1E-09 78.3 18.7 172 163-373 99-300 (441)
303 PRK12389 glutamate-1-semialdeh 98.3 5.1E-05 1.1E-09 77.7 18.4 145 201-373 111-278 (428)
304 TIGR00461 gcvP glycine dehydro 98.3 1.4E-05 3.1E-10 88.2 15.2 154 157-372 105-263 (939)
305 KOG0053|consensus 98.2 1.8E-05 3.8E-10 79.8 13.7 144 164-368 80-228 (409)
306 TIGR00713 hemL glutamate-1-sem 98.2 3.9E-05 8.3E-10 78.0 16.2 145 201-373 106-273 (423)
307 TIGR02407 ectoine_ectB diamino 98.2 9E-05 1.9E-09 75.5 18.8 154 202-374 101-275 (412)
308 TIGR03372 putres_am_tran putre 98.2 7.7E-05 1.7E-09 76.8 18.3 146 201-367 136-297 (442)
309 PRK00062 glutamate-1-semialdeh 98.2 4.5E-05 9.7E-10 78.0 16.0 115 201-337 108-243 (426)
310 PRK11522 putrescine--2-oxoglut 98.2 6.5E-05 1.4E-09 77.7 17.1 145 201-367 143-304 (459)
311 PRK04013 argD acetylornithine/ 98.2 3.9E-05 8.5E-10 77.1 14.9 156 164-373 69-240 (364)
312 PF00202 Aminotran_3: Aminotra 98.2 0.00014 3E-09 72.2 18.5 175 164-374 62-257 (339)
313 COG4992 ArgD Ornithine/acetylo 98.1 5E-05 1.1E-09 76.4 14.0 160 164-373 87-263 (404)
314 PRK06541 hypothetical protein; 98.1 0.00021 4.5E-09 74.0 19.1 152 201-367 114-294 (460)
315 COG1921 SelA Selenocysteine sy 98.1 6E-05 1.3E-09 75.7 14.4 148 200-374 84-233 (395)
316 PRK08360 4-aminobutyrate amino 98.1 0.00018 3.9E-09 74.1 18.2 169 164-373 87-283 (443)
317 TIGR00700 GABAtrnsam 4-aminobu 98.1 0.00033 7.1E-09 71.5 20.0 153 201-373 96-276 (420)
318 PRK06062 hypothetical protein; 98.1 0.00029 6.4E-09 72.7 19.6 146 201-367 114-287 (451)
319 PRK08593 4-aminobutyrate amino 98.1 0.00036 7.8E-09 71.9 20.2 153 201-373 105-286 (445)
320 PLN00144 acetylornithine trans 98.1 0.00012 2.7E-09 73.8 16.3 157 201-373 74-246 (382)
321 PLN02482 glutamate-1-semialdeh 98.1 0.0002 4.3E-09 74.4 17.7 164 161-374 139-325 (474)
322 PRK09792 4-aminobutyrate trans 98.1 0.00034 7.3E-09 71.5 19.1 152 201-373 103-277 (421)
323 PRK06058 4-aminobutyrate amino 98.1 0.00052 1.1E-08 70.6 20.5 173 162-374 100-299 (443)
324 KOG0634|consensus 98.0 4.6E-05 9.9E-10 76.7 12.0 117 200-337 125-249 (472)
325 PRK08088 4-aminobutyrate amino 98.0 0.00027 5.8E-09 72.2 18.1 168 164-373 87-278 (425)
326 COG0626 MetC Cystathionine bet 98.0 0.00021 4.6E-09 72.4 16.1 133 201-370 80-217 (396)
327 PRK04612 argD acetylornithine 98.0 0.00034 7.4E-09 71.3 17.8 149 201-373 100-266 (408)
328 COG0160 GabT 4-aminobutyrate a 98.0 0.00065 1.4E-08 69.8 19.6 151 200-369 118-297 (447)
329 PLN02452 phosphoserine transam 98.0 0.00017 3.8E-09 72.5 15.1 152 163-375 54-211 (365)
330 PRK06777 4-aminobutyrate amino 98.0 0.00054 1.2E-08 70.0 18.5 153 201-373 103-277 (421)
331 PRK07495 4-aminobutyrate amino 98.0 0.00077 1.7E-08 69.0 19.4 153 201-373 103-277 (425)
332 PF03841 SelA: L-seryl-tRNA se 97.9 6.6E-06 1.4E-10 81.8 4.0 106 257-374 106-223 (367)
333 PRK07481 hypothetical protein; 97.9 0.0011 2.4E-08 68.4 20.5 172 163-367 88-286 (449)
334 PRK00615 glutamate-1-semialdeh 97.9 0.00025 5.5E-09 72.8 15.7 162 163-373 95-279 (433)
335 TIGR00709 dat 2,4-diaminobutyr 97.9 0.00079 1.7E-08 69.3 18.6 152 203-373 106-285 (442)
336 PRK13360 omega amino acid--pyr 97.9 0.0011 2.3E-08 68.4 19.4 150 201-366 108-287 (442)
337 PRK06149 hypothetical protein; 97.9 0.00052 1.1E-08 77.2 18.5 154 201-373 643-824 (972)
338 PRK06082 4-aminobutyrate amino 97.9 0.00064 1.4E-08 70.4 17.8 164 161-368 113-302 (459)
339 PRK09221 beta alanine--pyruvat 97.9 0.0013 2.9E-08 67.7 19.3 150 201-365 111-289 (445)
340 PRK05639 4-aminobutyrate amino 97.8 0.002 4.3E-08 66.7 20.1 153 201-373 115-301 (457)
341 PRK06105 aminotransferase; Pro 97.8 0.0015 3.1E-08 67.7 19.0 168 163-366 94-290 (460)
342 COG3844 Kynureninase [Amino ac 97.8 9E-05 2E-09 72.4 9.1 161 159-370 74-235 (407)
343 TIGR01365 serC_2 phosphoserine 97.8 0.00016 3.6E-09 72.9 11.0 153 162-374 40-196 (374)
344 COG0403 GcvP Glycine cleavage 97.8 0.00096 2.1E-08 67.4 16.1 179 107-372 97-280 (450)
345 PRK06209 glutamate-1-semialdeh 97.8 0.00067 1.5E-08 69.6 15.5 138 201-367 106-255 (431)
346 PRK06943 adenosylmethionine--8 97.8 0.0021 4.5E-08 66.5 18.9 150 201-366 116-294 (453)
347 PRK07678 aminotransferase; Val 97.8 0.002 4.3E-08 66.6 18.6 167 164-367 92-286 (451)
348 TIGR00508 bioA adenosylmethion 97.7 0.0019 4.1E-08 66.2 18.0 150 201-366 107-280 (427)
349 PRK07046 aminotransferase; Val 97.7 0.00094 2E-08 69.0 15.9 157 160-374 114-296 (453)
350 COG3033 TnaA Tryptophanase [Am 97.7 0.00023 5E-09 70.4 10.3 126 244-370 125-275 (471)
351 PRK07030 adenosylmethionine--8 97.7 0.0029 6.4E-08 65.6 19.0 150 201-366 109-287 (466)
352 PRK07036 hypothetical protein; 97.7 0.0052 1.1E-07 63.8 20.9 152 201-367 114-294 (466)
353 PRK07480 putative aminotransfe 97.7 0.00098 2.1E-08 69.0 15.0 169 161-366 94-291 (456)
354 PRK07482 hypothetical protein; 97.7 0.0019 4.1E-08 66.9 17.0 151 201-367 113-293 (461)
355 PRK06918 4-aminobutyrate amino 97.7 0.0022 4.8E-08 66.1 17.3 171 163-373 99-298 (451)
356 PRK08742 adenosylmethionine--8 97.7 0.0035 7.6E-08 65.2 18.7 150 201-366 131-309 (472)
357 PRK06916 adenosylmethionine--8 97.6 0.0037 8.1E-08 64.7 18.8 150 201-366 118-296 (460)
358 PRK12462 phosphoserine aminotr 97.6 0.00066 1.4E-08 68.2 12.8 150 164-374 52-208 (364)
359 COG0001 HemL Glutamate-1-semia 97.6 0.0015 3.2E-08 66.5 15.2 167 157-373 89-278 (432)
360 PRK07986 adenosylmethionine--8 97.6 0.0018 3.9E-08 66.5 15.9 165 164-366 89-277 (428)
361 PRK06938 diaminobutyrate--2-ox 97.6 0.0032 6.9E-08 65.4 17.8 154 202-374 129-311 (464)
362 PRK05630 adenosylmethionine--8 97.6 0.0038 8.3E-08 63.9 18.1 146 201-366 102-273 (422)
363 PRK06931 diaminobutyrate--2-ox 97.6 0.005 1.1E-07 63.8 18.5 151 203-373 125-304 (459)
364 PRK06917 hypothetical protein; 97.6 0.0067 1.4E-07 62.6 19.3 167 164-367 77-273 (447)
365 KOG3843|consensus 97.6 0.00021 4.5E-09 68.2 7.4 122 244-373 105-235 (432)
366 TIGR00699 GABAtrns_euk 4-amino 97.6 0.0044 9.5E-08 64.3 17.7 160 201-365 124-324 (464)
367 PRK07483 hypothetical protein; 97.5 0.0086 1.9E-07 61.7 19.6 150 201-366 92-272 (443)
368 PRK06148 hypothetical protein; 97.5 0.0045 9.7E-08 70.1 18.8 155 201-374 682-865 (1013)
369 PRK05965 hypothetical protein; 97.5 0.011 2.4E-07 61.3 20.1 151 201-366 109-287 (459)
370 PRK06173 adenosylmethionine--8 97.4 0.0031 6.8E-08 64.7 14.8 152 201-368 106-281 (429)
371 TIGR03251 LAT_fam L-lysine 6-t 97.4 0.0035 7.7E-08 64.3 13.9 152 201-360 105-286 (431)
372 PRK12566 glycine dehydrogenase 97.2 0.0044 9.5E-08 68.9 13.6 103 243-372 169-277 (954)
373 PRK08297 L-lysine aminotransfe 97.1 0.0096 2.1E-07 61.4 14.6 156 200-365 111-296 (443)
374 KOG1358|consensus 97.0 0.003 6.5E-08 63.2 8.8 117 242-363 178-304 (467)
375 COG0161 BioA Adenosylmethionin 96.9 0.036 7.7E-07 57.1 16.0 143 164-339 90-263 (449)
376 COG3977 Alanine-alpha-ketoisov 96.8 0.0091 2E-07 58.1 9.6 89 275-374 167-260 (417)
377 KOG2467|consensus 96.7 0.0094 2E-07 59.4 9.6 171 159-375 84-264 (477)
378 PF12897 Aminotran_MocR: Alani 96.7 0.021 4.5E-07 57.5 12.1 147 164-340 72-222 (425)
379 KOG0633|consensus 96.6 0.0064 1.4E-07 58.1 7.3 90 244-337 113-203 (375)
380 KOG1401|consensus 96.3 0.12 2.7E-06 52.2 14.9 127 200-344 117-259 (433)
381 PF06838 Met_gamma_lyase: Meth 96.1 0.22 4.7E-06 50.0 14.8 149 164-366 57-225 (403)
382 KOG1404|consensus 96.0 0.039 8.5E-07 55.5 9.1 121 201-339 111-260 (442)
383 PLN02974 adenosylmethionine-8- 95.7 0.59 1.3E-05 52.0 18.2 80 280-360 567-653 (817)
384 KOG1402|consensus 95.0 0.13 2.8E-06 50.9 8.9 132 164-338 104-254 (427)
385 COG1448 TyrB Aspartate/tyrosin 93.7 3.7 7.9E-05 41.6 16.0 146 200-366 95-249 (396)
386 KOG1405|consensus 91.3 0.64 1.4E-05 46.5 7.2 83 278-360 254-341 (484)
387 PLN02994 1-aminocyclopropane-1 90.4 0.66 1.4E-05 41.0 5.8 46 157-221 92-139 (153)
388 COG4100 Cystathionine beta-lya 90.2 3.3 7.3E-05 40.8 10.7 88 244-338 110-214 (416)
389 KOG2040|consensus 86.3 13 0.00028 40.3 12.9 108 244-372 207-316 (1001)
390 COG2515 Acd 1-aminocyclopropan 82.7 22 0.00048 35.1 11.9 120 201-337 65-192 (323)
391 KOG1412|consensus 76.5 26 0.00057 34.8 10.3 122 198-339 98-225 (410)
392 KOG3846|consensus 70.1 14 0.00031 36.6 6.8 111 249-368 166-281 (465)
393 cd00951 KDGDH 5-dehydro-4-deox 68.8 9.5 0.00021 37.0 5.4 61 270-330 11-74 (289)
394 cd01455 vWA_F11C1-5a_type Von 67.7 18 0.00039 33.2 6.7 53 280-332 95-149 (191)
395 COG0329 DapA Dihydrodipicolina 66.5 8.4 0.00018 37.7 4.6 55 270-324 15-69 (299)
396 cd00950 DHDPS Dihydrodipicolin 66.5 9.6 0.00021 36.6 4.9 57 268-324 9-65 (284)
397 COG0386 BtuE Glutathione perox 65.9 32 0.00069 30.7 7.5 85 274-367 38-134 (162)
398 KOG1403|consensus 65.4 8.3 0.00018 38.1 4.1 126 201-342 104-260 (452)
399 PLN02417 dihydrodipicolinate s 63.3 15 0.00032 35.5 5.5 55 269-323 11-65 (280)
400 TIGR00674 dapA dihydrodipicoli 63.1 11 0.00024 36.3 4.6 57 268-324 7-63 (285)
401 PRK03620 5-dehydro-4-deoxygluc 63.0 15 0.00031 36.0 5.5 61 270-330 18-81 (303)
402 COG1932 SerC Phosphoserine ami 63.0 28 0.00062 35.0 7.5 152 164-374 53-210 (365)
403 PRK03170 dihydrodipicolinate s 62.5 13 0.00028 36.0 5.0 57 268-324 10-66 (292)
404 TIGR03249 KdgD 5-dehydro-4-deo 61.1 12 0.00027 36.3 4.6 54 270-323 16-69 (296)
405 TIGR02313 HpaI-NOT-DapA 2,4-di 60.6 14 0.00031 35.9 4.9 55 269-323 10-64 (294)
406 COG0108 RibB 3,4-dihydroxy-2-b 59.9 20 0.00044 33.2 5.4 49 280-329 141-189 (203)
407 cd00408 DHDPS-like Dihydrodipi 59.8 13 0.00028 35.5 4.5 53 269-324 7-62 (281)
408 TIGR00683 nanA N-acetylneurami 59.8 18 0.00039 35.2 5.4 54 270-323 11-65 (290)
409 PF06506 PrpR_N: Propionate ca 58.0 79 0.0017 28.1 9.0 69 242-329 79-147 (176)
410 PRK04147 N-acetylneuraminate l 58.0 15 0.00032 35.6 4.5 55 270-324 14-69 (293)
411 PF00926 DHBP_synthase: 3,4-di 57.2 26 0.00055 32.3 5.6 64 265-329 121-185 (194)
412 PF00701 DHDPS: Dihydrodipicol 54.6 16 0.00034 35.3 4.1 61 270-330 12-75 (289)
413 TIGR00506 ribB 3,4-dihydroxy-2 51.2 36 0.00079 31.5 5.6 64 265-329 126-190 (199)
414 cd00954 NAL N-Acetylneuraminic 49.8 25 0.00055 33.9 4.7 62 269-330 10-75 (288)
415 cd00952 CHBPH_aldolase Trans-o 49.0 33 0.00071 33.7 5.3 50 274-323 23-72 (309)
416 PF06415 iPGM_N: BPG-independe 47.9 41 0.00088 31.7 5.5 17 309-325 43-59 (223)
417 PRK00910 ribB 3,4-dihydroxy-2- 46.7 47 0.001 31.2 5.7 47 281-328 154-200 (218)
418 PF06620 DUF1150: Protein of u 45.5 57 0.0012 25.5 5.1 68 254-327 4-71 (76)
419 PRK00014 ribB 3,4-dihydroxy-2- 45.1 50 0.0011 31.3 5.6 50 281-332 158-207 (230)
420 PRK01792 ribB 3,4-dihydroxy-2- 44.8 52 0.0011 30.9 5.6 63 265-328 136-199 (214)
421 cd00953 KDG_aldolase KDG (2-ke 44.3 39 0.00085 32.6 5.0 55 269-324 10-64 (279)
422 PRK03353 ribB 3,4-dihydroxy-2- 43.5 56 0.0012 30.6 5.7 50 281-332 153-202 (217)
423 PRK13397 3-deoxy-7-phosphohept 42.6 90 0.0019 30.0 7.0 84 249-338 108-197 (250)
424 PRK12595 bifunctional 3-deoxy- 40.8 1.2E+02 0.0027 30.5 8.1 82 250-337 212-299 (360)
425 TIGR01274 ACC_deam 1-aminocycl 40.4 1.4E+02 0.003 29.5 8.3 75 202-292 68-150 (337)
426 PF02603 Hpr_kinase_N: HPr Ser 40.0 42 0.00091 28.5 4.0 47 276-330 64-110 (127)
427 TIGR01361 DAHP_synth_Bsub phos 39.9 1.1E+02 0.0024 29.3 7.3 84 250-337 119-206 (260)
428 smart00642 Aamy Alpha-amylase 39.5 95 0.0021 27.5 6.4 30 307-336 65-94 (166)
429 COG0300 DltE Short-chain dehyd 39.1 3.7E+02 0.008 26.0 11.0 66 243-311 32-100 (265)
430 COG1504 Uncharacterized conser 38.4 65 0.0014 27.1 4.6 48 275-330 47-94 (121)
431 COG2870 RfaE ADP-heptose synth 37.3 86 0.0019 32.3 6.2 94 246-344 95-196 (467)
432 cd00308 enolase_like Enolase-s 36.5 2.6E+02 0.0056 25.7 9.1 85 269-366 97-181 (229)
433 PRK13758 anaerobic sulfatase-m 36.2 1.9E+02 0.0041 28.7 8.6 88 274-362 36-126 (370)
434 PF08659 KR: KR domain; Inter 35.6 3.1E+02 0.0067 24.1 9.7 68 243-313 27-99 (181)
435 PF05913 DUF871: Bacterial pro 34.4 71 0.0015 32.2 5.2 57 278-334 12-69 (357)
436 PRK08057 cobalt-precorrin-6x r 34.1 71 0.0015 30.5 4.9 34 308-341 48-81 (248)
437 PF00128 Alpha-amylase: Alpha 33.3 39 0.00084 31.7 3.0 32 304-335 44-75 (316)
438 PRK13396 3-deoxy-7-phosphohept 33.2 1.8E+02 0.0038 29.4 7.7 71 265-338 209-284 (352)
439 TIGR00334 5S_RNA_mat_M5 ribonu 33.1 45 0.00097 30.2 3.2 54 274-338 9-62 (174)
440 TIGR01275 ACC_deam_rel pyridox 31.8 2.2E+02 0.0048 27.5 8.1 56 201-271 57-113 (311)
441 PF14488 DUF4434: Domain of un 31.8 2E+02 0.0043 25.6 7.1 57 275-331 15-84 (166)
442 COG1105 FruK Fructose-1-phosph 31.0 1.5E+02 0.0031 29.5 6.6 59 275-334 109-168 (310)
443 TIGR02109 PQQ_syn_pqqE coenzym 30.7 3E+02 0.0066 27.1 9.0 52 275-330 35-86 (358)
444 TIGR01362 KDO8P_synth 3-deoxy- 30.4 2.6E+02 0.0057 27.0 8.0 77 253-335 106-185 (258)
445 COG1954 GlpP Glycerol-3-phosph 29.8 75 0.0016 28.9 4.0 49 278-337 12-62 (181)
446 KOG0369|consensus 29.7 49 0.0011 36.2 3.2 31 308-338 167-197 (1176)
447 PF01301 Glyco_hydro_35: Glyco 29.4 88 0.0019 30.9 4.9 56 276-331 20-82 (319)
448 PLN02831 Bifunctional GTP cycl 29.4 1.2E+02 0.0025 31.8 5.9 51 281-332 177-227 (450)
449 PF03162 Y_phosphatase2: Tyros 29.0 1.1E+02 0.0024 27.2 5.0 68 244-311 36-108 (164)
450 cd07484 Peptidases_S8_Thermita 28.9 3.2E+02 0.0069 25.3 8.5 62 265-330 96-158 (260)
451 cd07492 Peptidases_S8_8 Peptid 28.4 3.3E+02 0.0072 24.6 8.3 31 299-329 95-125 (222)
452 cd00758 MoCF_BD MoCF_BD: molyb 28.3 3.5E+02 0.0076 22.7 7.8 58 255-319 24-81 (133)
453 PLN00125 Succinyl-CoA ligase [ 27.8 1.5E+02 0.0032 29.2 6.1 77 248-336 54-132 (300)
454 TIGR01019 sucCoAalpha succinyl 27.8 1.4E+02 0.003 29.2 5.9 52 280-336 74-125 (286)
455 KOG1411|consensus 27.7 98 0.0021 31.4 4.7 94 243-339 147-245 (427)
456 cd01840 SGNH_hydrolase_yrhL_li 27.6 1.4E+02 0.0031 25.3 5.4 63 265-331 52-115 (150)
457 COG4221 Short-chain alcohol de 27.5 5.6E+02 0.012 24.6 10.1 89 201-310 7-96 (246)
458 cd00886 MogA_MoaB MogA_MoaB fa 27.3 3.4E+02 0.0074 23.4 7.8 60 255-319 25-84 (152)
459 PF01972 SDH_sah: Serine dehyd 27.1 1.7E+02 0.0036 28.7 6.1 74 278-366 76-152 (285)
460 PF05670 DUF814: Domain of unk 26.8 42 0.0009 26.6 1.7 25 315-340 20-45 (90)
461 cd03315 MLE_like Muconate lact 26.7 2.7E+02 0.0059 26.2 7.6 87 268-367 131-217 (265)
462 PRK09311 bifunctional 3,4-dihy 26.7 1.5E+02 0.0032 30.5 6.1 50 281-332 144-193 (402)
463 PRK14019 bifunctional 3,4-dihy 26.4 1.3E+02 0.0029 30.4 5.6 50 281-332 143-192 (367)
464 PF07071 DUF1341: Protein of u 25.9 1.8E+02 0.0039 27.2 5.8 66 253-329 135-206 (218)
465 TIGR03278 methan_mark_10 putat 25.7 2.5E+02 0.0055 28.8 7.5 84 276-362 53-137 (404)
466 PRK09314 bifunctional 3,4-dihy 25.6 1.3E+02 0.0027 30.3 5.2 50 281-332 142-191 (339)
467 cd07018 S49_SppA_67K_type Sign 25.1 3.7E+02 0.008 24.8 8.0 90 277-369 29-148 (222)
468 CHL00073 chlN photochlorophyll 24.8 1.3E+02 0.0028 31.4 5.3 52 278-331 81-134 (457)
469 PRK07709 fructose-bisphosphate 24.1 2.6E+02 0.0056 27.3 6.9 79 277-363 26-110 (285)
470 COG0296 GlgB 1,4-alpha-glucan 24.1 71 0.0015 34.7 3.3 45 291-337 195-239 (628)
471 TIGR02026 BchE magnesium-proto 24.1 5.3E+02 0.011 27.0 9.8 66 262-336 35-103 (497)
472 PRK12485 bifunctional 3,4-dihy 23.9 1.6E+02 0.0035 29.9 5.6 66 265-332 126-192 (369)
473 PRK09441 cytoplasmic alpha-amy 23.8 70 0.0015 33.3 3.2 30 305-334 74-103 (479)
474 cd02911 arch_FMN Archeal FMN-b 23.8 2.5E+02 0.0055 26.3 6.7 53 278-336 124-177 (233)
475 TIGR02717 AcCoA-syn-alpha acet 23.7 1.9E+02 0.0041 30.0 6.3 57 279-336 74-132 (447)
476 PF05368 NmrA: NmrA-like famil 23.6 5.5E+02 0.012 23.1 9.2 75 243-330 25-99 (233)
477 PRK09319 bifunctional 3,4-dihy 23.4 1.6E+02 0.0035 31.5 5.7 50 281-332 147-196 (555)
478 PRK09318 bifunctional 3,4-dihy 23.3 1.7E+02 0.0037 29.9 5.7 48 283-332 131-178 (387)
479 PLN02522 ATP citrate (pro-S)-l 23.0 2.5E+02 0.0055 30.5 7.2 75 250-336 64-141 (608)
480 PRK05773 3,4-dihydroxy-2-butan 22.7 1.9E+02 0.0041 27.2 5.5 47 281-329 162-208 (219)
481 PRK05301 pyrroloquinoline quin 22.7 4.4E+02 0.0095 26.2 8.6 53 274-330 43-95 (378)
482 PRK05678 succinyl-CoA syntheta 22.3 2E+02 0.0044 28.1 5.9 52 280-336 76-127 (291)
483 PRK14045 1-aminocyclopropane-1 21.9 6.8E+02 0.015 24.5 9.6 17 202-218 72-88 (329)
484 TIGR02189 GlrX-like_plant Glut 21.9 4.2E+02 0.009 21.1 7.9 72 242-318 9-82 (99)
485 PRK09355 hydroxyethylthiazole 21.7 1.2E+02 0.0026 28.8 4.1 49 278-333 44-92 (263)
486 PF02110 HK: Hydroxyethylthiaz 21.4 84 0.0018 30.1 2.9 52 278-336 39-90 (246)
487 PF02571 CbiJ: Precorrin-6x re 21.4 78 0.0017 30.2 2.7 14 275-288 50-64 (249)
488 PF00106 adh_short: short chai 21.1 4.9E+02 0.011 21.7 9.7 49 263-314 51-99 (167)
489 PF13380 CoA_binding_2: CoA bi 20.7 2.6E+02 0.0057 23.1 5.5 49 278-335 64-112 (116)
490 COG0367 AsnB Asparagine syntha 20.5 6.5E+02 0.014 26.8 9.7 107 198-337 230-349 (542)
491 TIGR00381 cdhD CO dehydrogenas 20.3 2E+02 0.0044 29.4 5.5 48 276-332 200-247 (389)
492 COG3961 Pyruvate decarboxylase 20.2 3.1E+02 0.0068 29.2 6.9 197 38-307 249-470 (557)
493 TIGR01430 aden_deam adenosine 20.2 5.9E+02 0.013 24.6 8.8 69 263-332 124-194 (324)
494 KOG2790|consensus 20.2 5E+02 0.011 25.8 7.8 78 243-332 101-182 (370)
495 PRK06687 chlorohydrolase; Vali 20.1 2.5E+02 0.0053 28.4 6.2 53 280-332 164-218 (419)
No 1
>KOG0628|consensus
Probab=100.00 E-value=1.6e-68 Score=526.19 Aligned_cols=276 Identities=54% Similarity=0.929 Sum_probs=267.7
Q ss_pred CCCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhh
Q psy1596 2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYL 81 (375)
Q Consensus 2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (375)
+++|...|++||++++ + ++|+ ++.++|++||||||+||||||+++||+|++||||++++++.||+|..+
T Consensus 40 ~llP~~aPe~pE~~~~--I--l~D~----ekiI~PGitHw~hP~fhAyfpa~~s~~siladmLs~~i~~vGFtW~ss--- 108 (511)
T KOG0628|consen 40 DLLPSKAPEKPESWED--I--LGDL----EKIIMPGITHWQHPHFHAYFPAGNSYPSILADMLSGGIGCVGFTWASS--- 108 (511)
T ss_pred hhCCCCCCCChhhHHH--H--HHHH----HHHccCCCcccCCCceeeEccCccchHHHHHHHHhcccccccceeecC---
Confidence 5789999999999999 9 9999 999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596 82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK 161 (375)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~ 161 (375)
|++|+||
T Consensus 109 ---------------------Pa~TELE---------------------------------------------------- 115 (511)
T KOG0628|consen 109 ---------------------PACTELE---------------------------------------------------- 115 (511)
T ss_pred ---------------------cchHHHH----------------------------------------------------
Confidence 9999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
..+++||++|+++| +.|++.+. ..++|++++++|++++.++++||.++..+.+.+.|.+.+..+..
T Consensus 116 --~ivmDWL~kml~LP---------~~Fl~~~~---g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~ 181 (511)
T KOG0628|consen 116 --VIVMDWLGKMLGLP---------AEFLSLGL---GDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLA 181 (511)
T ss_pred --HHHHHHHHHHhcCc---------HHHhccCC---CCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhh
Confidence 99999999999999 78876553 67899999999999999999999999999998888888888889
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia 321 (375)
++++|+|+++|+|++||+.++++++|.+|+|+++.|+.+.|+++|++|.++|++||+|++|.|||.++++|+|++|..||
T Consensus 182 ~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc 261 (511)
T KOG0628|consen 182 RLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVC 261 (511)
T ss_pred hheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|+||||||||+|++.+||++|.+.+|||+|||+++++|||+++.++|+.+|
T Consensus 262 ~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 262 REEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred hhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 999999999999999999999999999999999999999999999999999998
No 2
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=2.5e-64 Score=522.28 Aligned_cols=266 Identities=39% Similarity=0.699 Sum_probs=243.0
Q ss_pred CCCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhh
Q psy1596 2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYL 81 (375)
Q Consensus 2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (375)
+++|..+|++|+++++ + ++|+ .+.++|+++||+||+||||+|+++++++++||||++++|+++++|..+
T Consensus 97 ~~l~~~~P~~g~~~~~--i--l~~~----~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~s--- 165 (539)
T PLN02590 97 DMLPDSAPERPESLKE--L--LDDV----SKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTS--- 165 (539)
T ss_pred HhcCCCCCCCCCCHHH--H--HHHH----HHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHhcccccCCcccC---
Confidence 4578899999999998 9 9998 899999999999999999999999999999999999999999999999
Q ss_pred hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596 82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK 161 (375)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~ 161 (375)
|++++||
T Consensus 166 ---------------------Pa~t~lE---------------------------------------------------- 172 (539)
T PLN02590 166 ---------------------PAATELE---------------------------------------------------- 172 (539)
T ss_pred ---------------------chhHHHH----------------------------------------------------
Confidence 9999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
+++++||++++|+| +.|+. + ..++|+||+|||+||++||++||++...+.+.. ..+
T Consensus 173 --~~vi~wl~~l~glp---------~~~~~-~----~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~--------~~~ 228 (539)
T PLN02590 173 --IIVLDWLAKLLQLP---------DHFLS-T----GNGGGVIQGTGCEAVLVVVLAARDRILKKVGKT--------LLP 228 (539)
T ss_pred --HHHHHHHHHHhCCC---------ccccc-C----CCCceEEcCchHHHHHHHHHHHHHHHHhhhccc--------CCC
Confidence 99999999999999 33331 1 236899999999999999999999765432111 135
Q ss_pred ceEEEecCCCchHHHHHHHHcCC---eEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLV---KMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE 316 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e 316 (375)
+++||+|+++|+|+.||+++.|. +++.||+| ++++||+++|+++|++++++|.+|++||+|+|||.+|+||||++
T Consensus 229 ~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~ 308 (539)
T PLN02590 229 QLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVP 308 (539)
T ss_pred CEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHH
Confidence 78999999999999999986554 69999998 46899999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|++||++||+||||||||||+++++|++++++.|+|+||||++|+||||++|++||++|
T Consensus 309 Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~ll 367 (539)
T PLN02590 309 LGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLW 367 (539)
T ss_pred HHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999986
No 3
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=6.2e-61 Score=494.39 Aligned_cols=265 Identities=42% Similarity=0.727 Sum_probs=240.8
Q ss_pred CCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhh
Q psy1596 3 VVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLR 82 (375)
Q Consensus 3 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (375)
.++..+|++|+++++ + ++++ .+.++|+++||+||+||||+++++++++++||+|++++|+++++|..+
T Consensus 50 ~~~~~~p~~~~~~~~--~--l~~~----~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~~~~~~~~s---- 117 (490)
T PLN02880 50 LLPDSAPNQPETLDQ--V--LDDV----QAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITS---- 117 (490)
T ss_pred hccccCCCCCCCHHH--H--HHHH----HHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHhhccCCcccccC----
Confidence 577889999999988 8 8888 888999999999999999999999999999999999999999999988
Q ss_pred hhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHH
Q psy1596 83 HQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKY 162 (375)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~l 162 (375)
|++++||
T Consensus 118 --------------------p~~~~lE----------------------------------------------------- 124 (490)
T PLN02880 118 --------------------PAATELE----------------------------------------------------- 124 (490)
T ss_pred --------------------cccHHHH-----------------------------------------------------
Confidence 9999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+++++||++++|+| +.|... ..++|+||+|||+||++||++||++...+.+... .++
T Consensus 125 -~~vi~wl~~l~g~p---------~~~~~~-----~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~--------~~~ 181 (490)
T PLN02880 125 -MIVLDWLAKLLNLP---------EQFLST-----GNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA--------LEK 181 (490)
T ss_pred -HHHHHHHHHHhCCC---------chhhcC-----CCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc--------cCC
Confidence 99999999999999 333210 2367999999999999999999998654322111 246
Q ss_pred eEEEecCCCchHHHHHHHHcCC---eEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLV---KMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
++||+|+++|||+.||+++.|. +++.||+|+ +++||+++|+++|++++++|.+|++||+|+|||.+|++|||++|
T Consensus 182 ~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI 261 (490)
T PLN02880 182 LVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLEL 261 (490)
T ss_pred eEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHH
Confidence 7999999999999999986554 589999974 78999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|++||+|+|||||||++++++|++++++.|+++||||++|+||||++|++||++|
T Consensus 262 ~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~ll 319 (490)
T PLN02880 262 GKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLW 319 (490)
T ss_pred HHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999986
No 4
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=4.9e-61 Score=480.10 Aligned_cols=269 Identities=34% Similarity=0.555 Sum_probs=234.1
Q ss_pred CCCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhh
Q psy1596 2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYL 81 (375)
Q Consensus 2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (375)
..+|..+|++|++.++ + ++|+ .+.+.|++++|+||+||+|+++++++++++||+|++++|+|+++|..+
T Consensus 6 ~~~~~~lp~~~~~~~~--v--l~~~----~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~--- 74 (373)
T PF00282_consen 6 ARLDEELPEEGESLEE--V--LKDL----REILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEAS--- 74 (373)
T ss_dssp GGCHCCHHSSHH-HHH--H--HHHH----HHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTS---
T ss_pred hcCccccccCCCCHHH--H--HHHH----HHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccc---
Confidence 4578999999999999 9 8999 888999999999999999999999999999999999999999999988
Q ss_pred hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596 82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK 161 (375)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~ 161 (375)
|++++||
T Consensus 75 ---------------------P~~~~~E---------------------------------------------------- 81 (373)
T PF00282_consen 75 ---------------------PAATEIE---------------------------------------------------- 81 (373)
T ss_dssp ---------------------HHHHHHH----------------------------------------------------
T ss_pred ---------------------cccccch----------------------------------------------------
Confidence 9999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
+++++|+++++|+|. .+.. ...++|+||+|||+||++|+++||++..++.+..+.. ..+
T Consensus 82 --~~vi~~l~~l~g~~~---------~~~~-----~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~-----~~~ 140 (373)
T PF00282_consen 82 --REVIRWLADLFGLPE---------SFTF-----SKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVE-----EIP 140 (373)
T ss_dssp --HHHHHHHHHHTTGSG---------GTTS-----TTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTT-----HCS
T ss_pred --HHHHHHHHHHhCCcc---------cccc-----cCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccc-----ccc
Confidence 999999999999992 2210 0237899999999999999999999887654433211 035
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia 321 (375)
+++||+|+.+|||+.|++.+.|..++.||+|++|+||+++|+++|+++.++|.+|++|++|+|||.+|++|||++|+++|
T Consensus 141 ~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~ 220 (373)
T PF00282_consen 141 KPVIYVSEQAHYSIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADIC 220 (373)
T ss_dssp SEEEEEETTS-THHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHH
T ss_pred ccccccccccccHHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhc
Confidence 78999999999999999998888899999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++++||||||||||+++++|+++++..|+++||||++|+||||++|++||++|
T Consensus 221 ~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l 274 (373)
T PF00282_consen 221 EKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLL 274 (373)
T ss_dssp HHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEE
T ss_pred cccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEE
Confidence 999999999999999999999999999999999999999999999999999985
No 5
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=1.2e-54 Score=449.68 Aligned_cols=275 Identities=19% Similarity=0.245 Sum_probs=231.7
Q ss_pred CCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCC-CChHHHHHHHHHHhhccccccchhhhhhhh
Q psy1596 5 PKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPAL-NSYPSLLGDMLSDAINCLGFTWVRTEYLRH 83 (375)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (375)
...+|++|++.++ + ++++ .+.++++++||+||+|||||+++ +++.+.++| |++++|+|+++|..|
T Consensus 59 ~~~~p~~~~~~~~--~--~~~~----~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~s----- 124 (522)
T TIGR03799 59 SAEIPEQPTFVSE--H--TQFL----LDKLVAHSVHTASPSFIGHMTSALPYFMLPLSK-LMVALNQNLVKIETS----- 124 (522)
T ss_pred ccCCCCCCCChHH--H--HHHH----HHHHHcCCCCCCCCCeEEeccCCCchHHHHHHH-HHHHhcCCcceeecC-----
Confidence 5679999999888 8 8888 88899999999999999999996 333344788 677999999999999
Q ss_pred hhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHH
Q psy1596 84 QNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYS 163 (375)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le 163 (375)
|++++||
T Consensus 125 -------------------pa~t~lE------------------------------------------------------ 131 (522)
T TIGR03799 125 -------------------KAFTPLE------------------------------------------------------ 131 (522)
T ss_pred -------------------cchHHHH------------------------------------------------------
Confidence 9999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh-----
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE----- 238 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~----- 238 (375)
+++++||+++++.+. ++|...--...+.++|+||+|||+||++||++||++.....+. ..+....+
T Consensus 132 ~~v~~wl~~l~~~~~--------~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~-~~~~~~~gl~~~~ 202 (522)
T TIGR03799 132 RQVLGMMHHLVYGQD--------DDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGD-FKGVAREGLFAAL 202 (522)
T ss_pred HHHHHHHHHHhccCc--------ccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccc-ccccccccchhhh
Confidence 999999999996331 2221000000134679999999999999999999986432111 00111111
Q ss_pred ---hcCceEEEecCCCchHHHHHHHHcCC---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 239 ---INSRLVAYCSDQAHSSVEKAGLIGLV---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 239 ---~~~~~vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
..++++||+|+.+|+|+.|++++.+. +++.||+|++|+||+++|+++|+++.++|.+|++|++|+|||++|++|
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD 282 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID 282 (522)
T ss_pred hhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC
Confidence 12467999999999999999976544 899999999999999999999999988899999999999999999999
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
||++|+++|+++|+|+|||||||++.++++++++++.|+++|||+++|+||||++|+|||++|
T Consensus 283 pl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~ll 345 (522)
T TIGR03799 283 PLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVL 345 (522)
T ss_pred CHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999985
No 6
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=2.2e-53 Score=444.80 Aligned_cols=252 Identities=18% Similarity=0.168 Sum_probs=214.7
Q ss_pred cchhhhHhhhhcccccCCCC-CceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhcccc
Q psy1596 25 DVGFYYLRHFAELITHWQSP-YMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINA 103 (375)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 103 (375)
++...+.+.+.+++++|+|| ||+||+++++++||++||++++++|+|+.+|+.| |
T Consensus 64 ~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~S------------------------P 119 (608)
T TIGR03811 64 DVLDELSSRLRTESVPWHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESS------------------------P 119 (608)
T ss_pred HHHHHHHHHHhcCCCCCCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccC------------------------c
Confidence 33333378888999999999 9999999999999999999999999999999999 9
Q ss_pred ccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCC
Q psy1596 104 ACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTP 183 (375)
Q Consensus 104 ~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~ 183 (375)
++++|| +++++||++|+|++
T Consensus 120 ~~t~lE------------------------------------------------------~~vi~~la~l~G~~------ 139 (608)
T TIGR03811 120 ATSQME------------------------------------------------------EEVGKEFATLMGYK------ 139 (608)
T ss_pred hHHHHH------------------------------------------------------HHHHHHHHHHhCCC------
Confidence 999999 99999999999998
Q ss_pred CchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHH-----HHhhc----cCCcchh------------------
Q psy1596 184 SLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAI-----RKYQQ----SHPELEH------------------ 236 (375)
Q Consensus 184 ~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~-----~~~~~----~~~~~~~------------------ 236 (375)
. ++|+||||||+||++||++||+.+. .+.+. +..+|+.
T Consensus 140 --------------~-~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~ 204 (608)
T TIGR03811 140 --------------N-GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQ 204 (608)
T ss_pred --------------C-CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccc
Confidence 2 5799999999999999999999641 11000 0001100
Q ss_pred ------h-----hhcCce-EEEecCCCchHHHHHHHHcC---CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEE
Q psy1596 237 ------A-----EINSRL-VAYCSDQAHSSVEKAGLIGL---VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG 301 (375)
Q Consensus 237 ------~-----~~~~~~-vV~~S~~aH~Sv~kaa~lg~---~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~ 301 (375)
. ....++ ++++|+.+|||+.||+.+.| .+++.||+|++++||+++|+++|+++.++|.+|++||+
T Consensus 205 ~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVa 284 (608)
T TIGR03811 205 IDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVG 284 (608)
T ss_pred hhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEE
Confidence 0 001223 79999999999999997544 37999999999999999999999999999999999999
Q ss_pred EcCCCCccccccHHHHHHHH---HhcCC--EEEEecccccCc--cc------------------------------chhh
Q psy1596 302 TLGTTGACAFDNLEELGPIC---EKEGL--WLHVDAAYAGSS--FI------------------------------CPEF 344 (375)
Q Consensus 302 t~GtT~tGavDpl~eI~~ia---~~~~i--wlHVDaA~gg~~--~~------------------------------~~~~ 344 (375)
|+|||++|+||||++|+++| +++|+ ||||||||||++ ++ ++++
T Consensus 285 taGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~ 364 (608)
T TIGR03811 285 VVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREV 364 (608)
T ss_pred EcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhH
Confidence 99999999999999999999 67887 699999999975 22 2467
Q ss_pred hhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 345 RKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 345 ~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++++|+++||||++||||||++||+||+++
T Consensus 365 ~~~l~gle~ADSItvDpHK~g~~Py~~G~ll 395 (608)
T TIGR03811 365 YNAYKAISEAESVTIDPHKMGYIPYSAGGIV 395 (608)
T ss_pred HHHHhcCcCceEEEeCcccccccCCCeEEEE
Confidence 8899999999999999999999999999874
No 7
>KOG0629|consensus
Probab=100.00 E-value=5.2e-50 Score=391.62 Aligned_cols=260 Identities=26% Similarity=0.337 Sum_probs=239.0
Q ss_pred CCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhh
Q psy1596 3 VVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLR 82 (375)
Q Consensus 3 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (375)
.+.-++|+++++.+| + +.++ +..+...+...|||||....++..+.+++|+||+++.|.|.||++..
T Consensus 70 l~nlel~~~~esl~q--i--l~~c-----r~tl~y~vKTgHprffNQl~~glD~~~Lag~wlT~t~Ntn~~TYEiA---- 136 (510)
T KOG0629|consen 70 LFNLELRDQPESLAQ--I--LEDC-----RDTLKYSVKTGHPRFFNQLSSGLDPIGLAGEWLTSTANTNMFTYEIA---- 136 (510)
T ss_pred HhCcccCCChhhHHH--H--HHHH-----HHHHHhhhccCCCcchhhhccCCCHHHHHHHHHHhccCCCCceEEec----
Confidence 356789999999999 8 8888 77889999999999999999999999999999999999999999766
Q ss_pred hhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHH
Q psy1596 83 HQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKY 162 (375)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~l 162 (375)
|..+-+|
T Consensus 137 --------------------PvF~lmE----------------------------------------------------- 143 (510)
T KOG0629|consen 137 --------------------PVFVLME----------------------------------------------------- 143 (510)
T ss_pred --------------------ceEEeeh-----------------------------------------------------
Confidence 9999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
++|+..+.++.|++ ..++|+|.+||+.||++|+.+||.+..++.+..+. ...|.
T Consensus 144 -~~vl~km~~ivGw~--------------------~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm-----~~~p~ 197 (510)
T KOG0629|consen 144 -EEVLAKMREIVGWE--------------------EGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGM-----FALPP 197 (510)
T ss_pred -HHHHHHHHHHhCCC--------------------CCCCceecCCchhHHHHHHHHHHhhcCchhhhhhh-----hcCCc
Confidence 99999999999999 34789999999999999999999876655433221 12467
Q ss_pred eEEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
+++|+|+++|||+.|++.. |...++.|++|+.|+|++++||+.|-++.++|..||+|.+|+|||+.|++|||+.|++
T Consensus 198 lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iad 277 (510)
T KOG0629|consen 198 LILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIAD 277 (510)
T ss_pred EEEEecccchhhHHHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHH
Confidence 8999999999999999853 4578999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
+|++|++|+||||||||+.+++..+|+++.|+|+|||++++|||++++|..||++
T Consensus 278 iC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~ 332 (510)
T KOG0629|consen 278 ICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAF 332 (510)
T ss_pred HHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHH
Confidence 9999999999999999999999999999999999999999999999999999975
No 8
>PLN02263 serine decarboxylase
Probab=100.00 E-value=1.2e-47 Score=390.06 Aligned_cols=229 Identities=19% Similarity=0.201 Sum_probs=200.8
Q ss_pred ccchhhhHhhhhcccccCCCCCceeecCCCCCh-HHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhccc
Q psy1596 24 SDVGFYYLRHFAELITHWQSPYMHAYFPALNSY-PSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDIN 102 (375)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (375)
+++..-|.+.+.|..+| |+|| |...++ ++.++++|...+|+.++.|..+
T Consensus 76 ~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s------------------------ 125 (470)
T PLN02263 76 ASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIES------------------------ 125 (470)
T ss_pred HHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccC------------------------
Confidence 34444448889998877 9999 888899 8999999999999999999887
Q ss_pred c---ccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCC
Q psy1596 103 A---ACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTK 179 (375)
Q Consensus 103 p---~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~ 179 (375)
| .++++| +++++|+++++|+|.
T Consensus 126 ~~~~~s~~~E------------------------------------------------------~~Vi~wla~L~g~p~- 150 (470)
T PLN02263 126 NYGVHSRQFE------------------------------------------------------VGVLDWFARLWEIEK- 150 (470)
T ss_pred CcchhHHHHH------------------------------------------------------HHHHHHHHHHhCCCC-
Confidence 6 577788 999999999999982
Q ss_pred CCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH
Q psy1596 180 DPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG 259 (375)
Q Consensus 180 ~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa 259 (375)
+..+|+||+||||||++|+++||++. ++.++|+|+++|+|+.||+
T Consensus 151 ------------------~~~~G~vtsGGTEaNL~Al~aARe~~-----------------~~~vvy~S~~aH~Sv~KAa 195 (470)
T PLN02263 151 ------------------NEYWGYITNCGTEGNLHGILVGREVF-----------------PDGILYASRESHYSVFKAA 195 (470)
T ss_pred ------------------CCCeEEEeCcHHHHHHHHHHHHHhhc-----------------CCcEEEEcCCccHHHHHHH
Confidence 34579999999999999999999852 2358999999999999999
Q ss_pred HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCC-----EEEEeccc
Q psy1596 260 LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGL-----WLHVDAAY 334 (375)
Q Consensus 260 ~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~i-----wlHVDaA~ 334 (375)
++.+.+++.||+|++|+||+++|+++|++++ .+|++|++|+|||.+|++|||++|+++|+++|+ ||||||||
T Consensus 196 ~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~ 272 (470)
T PLN02263 196 RMYRMECVKVDTLVSGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGAL 272 (470)
T ss_pred HhcCCcceEeccCCCCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccc
Confidence 9988899999999999999999999998764 369999999999999999999999999999997 99999999
Q ss_pred ccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 335 AGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 335 gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
||+++...+....+.+.+.+|||++|+|||+++|++||++|
T Consensus 273 GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll 313 (470)
T PLN02263 273 FGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQI 313 (470)
T ss_pred hhhHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEE
Confidence 99876332223345666779999999999999999999985
No 9
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=377.27 Aligned_cols=256 Identities=24% Similarity=0.300 Sum_probs=227.2
Q ss_pred CCCCCCCCCCcccccccccccchhhhHh-hhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhh
Q psy1596 5 PKLIPNQGETSKQENDLRNSDVGFYYLR-HFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRH 83 (375)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (375)
...+|+.|.+.++ + +.++ .. .+.+...+++||+++.|..+...++++++++++.++|+|...|..+
T Consensus 30 ~~~~p~~g~p~~~--v--~~~l----~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~----- 96 (460)
T COG0076 30 SRMAPEKGEPLEE--V--LDEL----AELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDES----- 96 (460)
T ss_pred hccCCccCCchhh--H--HHHH----HHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccC-----
Confidence 4568999999888 8 7777 23 4677888899999999999999999999999999999999999999
Q ss_pred hhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHH
Q psy1596 84 QNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYS 163 (375)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le 163 (375)
|+++++|
T Consensus 97 -------------------p~a~~~E------------------------------------------------------ 103 (460)
T COG0076 97 -------------------PAAAELE------------------------------------------------------ 103 (460)
T ss_pred -------------------hhHHHHH------------------------------------------------------
Confidence 9999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++++|+++|+|+| ....|+||+||||||++|++++|+++.+...... + .....+
T Consensus 104 ~~~v~~l~~l~~~~--------------------~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~-~----~~~~~P 158 (460)
T COG0076 104 ERVVNMLSDLLGAP--------------------EEASGTFTSGGTEANLLALLAARERWRKRALAES-G----KPGGKP 158 (460)
T ss_pred HHHHHHHHHHhCCC--------------------CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc-c----ccCCCC
Confidence 99999999999998 4578999999999999999999998764321110 0 001245
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
+||+|+.+|+|+.|++++.|..++.+|++. +++||+++|+++|++++..| +||+|+|||.+|.+|||++|++||+
T Consensus 159 ~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~ia~ia~ 234 (460)
T COG0076 159 NIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEELADIAE 234 (460)
T ss_pred eEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHHHHHHH
Confidence 899999999999999999999999999877 89999999999999998866 7999999999999999999999999
Q ss_pred hcCCEEEEecccccCcccchhhhhh-hcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 323 KEGLWLHVDAAYAGSSFICPEFRKW-LAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~~~~~~~~-~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++++|+||||||||+.+..++++.. ..+++.||||++|+|||+++|++||+++
T Consensus 235 ~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 235 EYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred HcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence 9999999999999999877777776 6899999999999999999999999874
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.8e-40 Score=337.21 Aligned_cols=251 Identities=14% Similarity=0.129 Sum_probs=205.9
Q ss_pred CCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhh
Q psy1596 5 PKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQ 84 (375)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (375)
...+|++|.+.++ + ++.+ .+.+. ..+-.||+|++|+..+..+. +.|++..++|++.+.|..+
T Consensus 14 ~~~~p~~~~~~~~--~--~~~~----~~~iy--ld~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~------ 75 (431)
T TIGR01788 14 KYRMPEEEMPPDA--A--YQLI----HDELS--LDGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEY------ 75 (431)
T ss_pred cccCCCCCCCHHH--H--HHHH----HHHhh--hcCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccC------
Confidence 4578999998888 7 6776 44432 36778999999999887666 6999999999998899777
Q ss_pred hccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHH
Q psy1596 85 NRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSS 164 (375)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~ 164 (375)
|..+++| +
T Consensus 76 ------------------~~~~~le------------------------------------------------------~ 83 (431)
T TIGR01788 76 ------------------PQTAEIE------------------------------------------------------N 83 (431)
T ss_pred ------------------ccHHHHH------------------------------------------------------H
Confidence 8888888 9
Q ss_pred HHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceE
Q psy1596 165 KVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 244 (375)
Q Consensus 165 ~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~v 244 (375)
++++|+++++|++.. . +...|++||||||||++|+.++|++...+.+..+. ...+++
T Consensus 84 ~~~~~la~llg~~~~-------~----------~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~------~~~~~~ 140 (431)
T TIGR01788 84 RCVNMLADLWHAPAK-------D----------AEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGK------PTDKPN 140 (431)
T ss_pred HHHHHHHHHhCCCCC-------C----------CCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCcE
Confidence 999999999999820 0 13567889999999999999998653322111100 012458
Q ss_pred EEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 245 AYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 245 V~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
||+|+.+|+|+.|++++.+.+++.||+|++ ++||+++|+++|+++ +++|++|+|||++|++|||++|+++|++
T Consensus 141 ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~ 214 (431)
T TIGR01788 141 LVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDE 214 (431)
T ss_pred EEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHH
Confidence 999999999999999877789999999875 699999999999865 5699999999999999999999999999
Q ss_pred c------CCEEEEecccccCcc--cchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 324 E------GLWLHVDAAYAGSSF--ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 324 ~------~iwlHVDaA~gg~~~--~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+ |+|+||||||||+++ .+++.+..+. ++++||+++|+|||+++|+|||+||
T Consensus 215 ~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~ 273 (431)
T TIGR01788 215 YNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVI 273 (431)
T ss_pred HHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEE
Confidence 9 999999999999864 2455554444 6789999999999999999999986
No 11
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=5.3e-39 Score=322.01 Aligned_cols=216 Identities=23% Similarity=0.263 Sum_probs=182.4
Q ss_pred CCCCceeecCCCCCh-HHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhcccc----ccccccccccccc
Q psy1596 42 QSPYMHAYFPALNSY-PSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINA----ACSTTNSKHHAVE 116 (375)
Q Consensus 42 ~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~lE~~~~~~~ 116 (375)
+||++|.++|...++ ++.+++++....|+.+ .|... + .+.++|
T Consensus 20 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~g-np~~~------------------------~~~g~~~~~~e------- 67 (380)
T PRK02769 20 HNQYFNVGYPEAADFDYSALKRFFSFSINNCG-DPYSK------------------------SNYPLNSFDFE------- 67 (380)
T ss_pred HhhhcccCCCchhhcCHHHHHHHHHhhhccCC-Ccccc------------------------CCCCCChHHHH-------
Confidence 799999999999988 6999999999998654 45433 2 134444
Q ss_pred cccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCC
Q psy1596 117 KTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFL 196 (375)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~ 196 (375)
+++++|+++++|++.
T Consensus 68 -----------------------------------------------~~~~~~~a~l~g~~~------------------ 82 (380)
T PRK02769 68 -----------------------------------------------RDVMNFFAELFKIPF------------------ 82 (380)
T ss_pred -----------------------------------------------HHHHHHHHHHhCCCC------------------
Confidence 999999999999983
Q ss_pred CCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCC
Q psy1596 197 RPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLS 276 (375)
Q Consensus 197 ~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~ 276 (375)
+..+|+|||||||||++|++++|+.. ++.+||+|+.+|+|+.|++++.+.+.+.||++++|+
T Consensus 83 -~~~~G~~TsGgTean~~a~~~ar~~~-----------------~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~ 144 (380)
T PRK02769 83 -NESWGYITNGGTEGNLYGCYLARELF-----------------PDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGE 144 (380)
T ss_pred -CCCCEEEecChHHHHHHHHHHHHHhC-----------------CCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCc
Confidence 23469999999999999999998742 235899999999999999987777888999999999
Q ss_pred cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcC---CEEEEecccccCcccchhhhhhhcCCCc
Q psy1596 277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG---LWLHVDAAYAGSSFICPEFRKWLAGVEY 353 (375)
Q Consensus 277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~---iwlHVDaA~gg~~~~~~~~~~~~~gie~ 353 (375)
||+++|+++|+++ +..|++|++++|||++|++||+++|+++|+++| +|+|||||||++.+...+.+..++..+.
T Consensus 145 id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~ 221 (380)
T PRK02769 145 IDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADG 221 (380)
T ss_pred CcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCC
Confidence 9999999999876 556889999999999999999999999999998 6999999999987643332223444447
Q ss_pred ccEEEEcCcccCCCCCcceeeC
Q psy1596 354 ANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 354 aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+||+++|+|||+++|+|||++|
T Consensus 222 vDsis~s~HK~~~~P~g~G~l~ 243 (380)
T PRK02769 222 IDSIAISGHKFIGSPMPCGIVL 243 (380)
T ss_pred CCEEEECCcccCCCCCCcEEEE
Confidence 8999999999999999999985
No 12
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=7.2e-38 Score=312.78 Aligned_cols=220 Identities=20% Similarity=0.217 Sum_probs=178.0
Q ss_pred CCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhcccccccccccccccccccccc
Q psy1596 42 QSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHY 121 (375)
Q Consensus 42 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~ 121 (375)
++.+|.||.....--++.+..|+....|..+.-|... ..+..+.++|
T Consensus 22 ~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~---------------------~~g~~a~~~e------------ 68 (374)
T PLN03032 22 KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIES---------------------NYGVHSRQFE------------ 68 (374)
T ss_pred hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccC---------------------CCCccHHHHH------------
Confidence 7788999987776667888888887777665444322 0012344444
Q ss_pred CCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc
Q psy1596 122 KPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF 201 (375)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~ 201 (375)
+++++|+++++|++. +..+
T Consensus 69 ------------------------------------------~~v~~~ia~llg~~~-------------------~~~~ 87 (374)
T PLN03032 69 ------------------------------------------VGVLDWFARLWELEK-------------------DEYW 87 (374)
T ss_pred ------------------------------------------HHHHHHHHHHhCCCC-------------------ccCC
Confidence 999999999999983 3346
Q ss_pred EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHH
Q psy1596 202 ITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDK 281 (375)
Q Consensus 202 GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~ 281 (375)
|+|||||||||++|++++|+.. ++.+||+|+.+|+|+.|++++.+..++.||+|++|+||+++
T Consensus 88 G~fTsGGTEaNl~al~~ar~~~-----------------~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~ 150 (374)
T PLN03032 88 GYITTCGTEGNLHGILVGREVF-----------------PDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDD 150 (374)
T ss_pred EEEeCchHHHHHHHHHHHHHhC-----------------CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHH
Confidence 9999999999999999998742 22479999999999999998877788999999999999999
Q ss_pred HHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcC-----CEEEEecccccCcccchhhhhhhcCCCcccE
Q psy1596 282 LIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG-----LWLHVDAAYAGSSFICPEFRKWLAGVEYANS 356 (375)
Q Consensus 282 Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~-----iwlHVDaA~gg~~~~~~~~~~~~~gie~aDS 356 (375)
|+++|++++. .|++|++++|||++|++||+++|+++|+++| +|+|||||||++.+........++..+.+||
T Consensus 151 L~~~i~~~~~---~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDS 227 (374)
T PLN03032 151 LERALAKNRD---KPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGS 227 (374)
T ss_pred HHHHHHHcCC---CCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcE
Confidence 9999987532 4889999999999999999999999999996 5999999999986532111122233356899
Q ss_pred EEEcCcccCCCCCcceeeC
Q psy1596 357 IAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 357 i~~d~HK~l~~P~~~g~l~ 375 (375)
+++|+|||+++|+|||+|+
T Consensus 228 is~s~HK~~g~P~g~G~ll 246 (374)
T PLN03032 228 VSVSGHKFLGCPMPCGVAL 246 (374)
T ss_pred EEECcccccCCCcCeEEEE
Confidence 9999999999999999985
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=4.8e-34 Score=279.43 Aligned_cols=228 Identities=37% Similarity=0.521 Sum_probs=192.9
Q ss_pred ceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhccccccccccccccccccccccCCCC
Q psy1596 46 MHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTS 125 (375)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~ 125 (375)
|+++|++++.++++++|+++.++|++..+|..+ |..+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~------------------------~~~~~le---------------- 40 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDES------------------------PAATEME---------------- 40 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccC------------------------chhHHHH----------------
Confidence 788999999999999999999999999888877 8888888
Q ss_pred CchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe
Q psy1596 126 PFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ 205 (375)
Q Consensus 126 ~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft 205 (375)
+++++|+++++|++. ....++||
T Consensus 41 --------------------------------------~~~~~~~~~~~g~~~-------------------~~~~~~~t 63 (345)
T cd06450 41 --------------------------------------AEVVNWLAKLFGLPS-------------------EDADGVFT 63 (345)
T ss_pred --------------------------------------HHHHHHHHHHhCCCC-------------------CCCCEEEe
Confidence 999999999999972 23469999
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHH
Q psy1596 206 TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEA 285 (375)
Q Consensus 206 sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~a 285 (375)
+|||+||++++.+++.+..++.+.... ...++.+|++++.+|+|+.+++.+.+.+++.||+++++.+|+++|+++
T Consensus 64 ~ggt~a~~~al~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 138 (345)
T cd06450 64 SGGSESNLLALLAARDRARKRLKAGGG-----RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAA 138 (345)
T ss_pred CChhHHHHHHHHHHHHHhhhhhhcccc-----cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHH
Confidence 999999999999998754322111000 001245899999999999999987788999999988899999999999
Q ss_pred HHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccC
Q psy1596 286 IERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWL 365 (375)
Q Consensus 286 I~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l 365 (375)
|+++.++|..+.+|+++.++|++|.++|+++|+++|+++|+|+|+|+||+++.......+....+++.+|++++++|||+
T Consensus 139 i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l 218 (345)
T cd06450 139 IDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYG 218 (345)
T ss_pred HHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhh
Confidence 99877777778889999999999999999999999999999999999999987654444443445667999999999999
Q ss_pred CCCCcceeeC
Q psy1596 366 MVHFDCTAMW 375 (375)
Q Consensus 366 ~~P~~~g~l~ 375 (375)
++|++||+++
T Consensus 219 ~~p~g~g~~~ 228 (345)
T cd06450 219 LVPLGCSAVL 228 (345)
T ss_pred CCCcchHHHH
Confidence 9999999864
No 14
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=1.1e-23 Score=208.33 Aligned_cols=169 Identities=18% Similarity=0.220 Sum_probs=141.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
+++-+++++++++++|.+ + ...+|||||||+|.+|+..+......+
T Consensus 43 ~~~ve~AR~~iA~llga~--------------------~-~eIiFTSG~TEsnNlaI~g~~~a~~~~------------- 88 (386)
T COG1104 43 RKAVEEAREQIAKLLGAD--------------------P-EEIIFTSGATESNNLAIKGAALAYRNA------------- 88 (386)
T ss_pred HHHHHHHHHHHHHHhCCC--------------------C-CeEEEecCCcHHHHHHHHhhHHhhhcc-------------
Confidence 344478899999999998 2 579999999999999998754432111
Q ss_pred cCceEEEecCCCchHHHHHHH-H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596 240 NSRLVAYCSDQAHSSVEKAGL-I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE 316 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~kaa~-l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e 316 (375)
..+-.|++|...|.|+...++ + .|.++.++|+|.+|++|+++|+++|++++ .+|.+.+.++++|.++||+|
T Consensus 89 ~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T------~LVSim~aNnE~G~IQpI~e 162 (386)
T COG1104 89 QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDT------ILVSIMHANNETGTIQPIAE 162 (386)
T ss_pred cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCc------eEEEEEecccCeeecccHHH
Confidence 023379999999999999985 4 47899999999999999999999999774 48999999999999999999
Q ss_pred HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++|++++++||||++++.+.+..+- ..+ .+|.+++|+||+ +.|.|+|+||
T Consensus 163 i~~i~k~~~i~fHvDAvQa~Gkipi~~-----~~~-~vD~ls~SaHK~-~GpkGiGaLy 214 (386)
T COG1104 163 IGEICKERGILFHVDAVQAVGKIPIDL-----EEL-GVDLLSFSAHKF-GGPKGIGALY 214 (386)
T ss_pred HHHHHHHcCCeEEEehhhhcCceeccc-----ccc-CcceEEeehhhc-cCCCceEEEE
Confidence 999999999999999999999875431 111 279999999996 5799999987
No 15
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=4.6e-23 Score=203.72 Aligned_cols=182 Identities=20% Similarity=0.258 Sum_probs=145.0
Q ss_pred CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596 152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH 231 (375)
Q Consensus 152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~ 231 (375)
++..+.+...+++++.+++++++|.+. ..+++|+|||++|..++.+++....
T Consensus 50 ~~~~~~~~~~~~~~~~~~la~~~g~~~---------------------~~~~~~~ggt~a~~~a~~~~~~~~~------- 101 (371)
T PRK13520 50 DPGLFPGTAKLEEEAVEMLGELLHLPD---------------------AYGYITSGGTEANIQAVRAARNLAK------- 101 (371)
T ss_pred CcccCccHHHHHHHHHHHHHHHhCCCC---------------------CCeEEecCcHHHHHHHHHHHHhhcc-------
Confidence 333345677888999999999999872 2579999999999999988765310
Q ss_pred CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
.++..|++++.+|+|+.+++...|.+++.||+++++.+|+++|+++|+++ +.+|+++.++|++|.+
T Consensus 102 --------~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~vi~~~~~~~tG~~ 167 (371)
T PRK13520 102 --------AEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDN------TIGIVGIAGTTELGQV 167 (371)
T ss_pred --------CCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhC------CEEEEEEcCCcCCccc
Confidence 12357899999999999998877889999999888999999999999754 3467788899999999
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCccc-chhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+|+++|+++|+++|+++|||+||+++.+. .......-.....+|++++++|||+++|.++|.++
T Consensus 168 ~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~ 232 (371)
T PRK13520 168 DPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGIL 232 (371)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEE
Confidence 99999999999999999999999986531 11100000113357999999999999999998663
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.90 E-value=2e-22 Score=199.58 Aligned_cols=174 Identities=21% Similarity=0.284 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
.+++++++++++++|.+. ..+++++|||++|+.++.+++..... + .
T Consensus 59 ~~~~~~~~~la~~~g~~~---------------------~~~~~~~g~~~~~~~~~~~~~~~~~~--~-----------~ 104 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPD---------------------AYGYIVSGGTEANIQAVRAAKNLARE--E-----------K 104 (373)
T ss_pred HHHHHHHHHHHHHhCCCC---------------------CCeEEeccHHHHHHHHHHHHHHHHhc--c-----------C
Confidence 344899999999999972 34789999999999988776542110 0 1
Q ss_pred CceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
++..|++++.+|+++.++++..|.+++.+|+++++.+|+++|++++++++ ..++.+.++|++|.++|+++|+++
T Consensus 105 ~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l 178 (373)
T TIGR03812 105 RTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKI 178 (373)
T ss_pred CCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHH
Confidence 23478999999999999998888899999998899999999999997642 345666689999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchh----hhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPE----FRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~----~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
|+++|+|+|||+||+++.+.... +....-....+|++++|+|||++.|.++|.+
T Consensus 179 ~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~ 236 (373)
T TIGR03812 179 ALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGI 236 (373)
T ss_pred HHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEE
Confidence 99999999999999876431100 0000001125799999999999999999854
No 17
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.89 E-value=4.8e-22 Score=202.50 Aligned_cols=176 Identities=19% Similarity=0.147 Sum_probs=136.9
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH-HHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS-ESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT-~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
...+.+++.+|+++++|.+ ....+++++||| +++.+++.+++.+.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~--------------------~~~~a~~v~~~Tg~al~laL~alr~~~-------------- 148 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR--------------------SIKSAFVVPLATGMSLSLCLSALRHKR-------------- 148 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC--------------------CCCEEEEECCHHHHHHHHHHHHcCCcC--------------
Confidence 3455588899999999998 334589999999 78989988776421
Q ss_pred hhcCceEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596 238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL 314 (375)
Q Consensus 238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl 314 (375)
.++..|+++..+|.|+.||+.+.|.+++.|++ ++++.||+++|+++|++... ..+.+|+.|.+++..|..|||
T Consensus 149 --~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL 224 (444)
T TIGR03531 149 --PKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDI 224 (444)
T ss_pred --CCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCH
Confidence 01235667778899999999999999999995 46799999999999985321 224456655556667799999
Q ss_pred HHHHHHHHhcCCEEEEecccccCcccchhhhhhh-cCC--CcccEEEEcCcccCCCCCcceeeC
Q psy1596 315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWL-AGV--EYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~-~gi--e~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++|+++|++||+|+|||+|||... +.+.++. .++ +++|++++|+|||+.+|.++|+++
T Consensus 225 ~eIa~la~k~gI~lIvDaAyg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~ 285 (444)
T TIGR03531 225 EEIAKICANYDIPHIVNNAYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIY 285 (444)
T ss_pred HHHHHHHHHcCCEEEEECcCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEE
Confidence 999999999999999999999743 3333333 343 368999999999999999998863
No 18
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=2.6e-21 Score=195.64 Aligned_cols=163 Identities=20% Similarity=0.185 Sum_probs=136.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHH-HHHHHHHHhhccCCcchhhhhcCc
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLA-GRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~a-ar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+++++.+++++|.+ +....+||+|.|+++.....+ .+.. .++
T Consensus 69 e~aRe~va~~~~a~--------------------~~~eIvft~~tT~aln~va~~l~~~~-----------------~~g 111 (405)
T COG0520 69 EAAREAVARFLNAD--------------------SSDEIVFTRGTTEALNLVARGLGRSL-----------------KPG 111 (405)
T ss_pred HHHHHHHHHHhCCC--------------------CCCeEEEeCChhHHHHHHHHHhhhhh-----------------cCC
Confidence 88999999999998 345699999999995544443 3220 134
Q ss_pred eEEEecCCCchHHHHHHH-H---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGL-I---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG 318 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~-l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~ 318 (375)
+.|++|+..|.|+.-.++ + .|.+++.||++++|.++.+++++.|.+.+ .+|+++..++.+|.+.|+++|+
T Consensus 112 deIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~T------klvais~vSn~tG~~~pv~~I~ 185 (405)
T COG0520 112 DEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKT------KLVALSHVSNVTGTVNPVKEIA 185 (405)
T ss_pred CEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCc------eEEEEECccccccccchHHHHH
Confidence 689999999999998874 3 47899999999999999999999877654 4999999999999999999999
Q ss_pred HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++|+++|+|+.||||++.+.+... ++.+ .||.+.+++|||++.|.|+|+||
T Consensus 186 ~la~~~ga~v~VDaaq~~~h~~id-----v~~l-~~Df~afsgHKwl~gP~GiGvLy 236 (405)
T COG0520 186 ELAHEHGALVLVDAAQAAGHLPID-----VQEL-GCDFLAFSGHKWLLGPTGIGVLY 236 (405)
T ss_pred HHHHHcCCEEEEECccccCccCCC-----chhc-CCCEEEEcccccccCCCceEEEE
Confidence 999999999999999999976432 1111 47999999999999999999997
No 19
>KOG1383|consensus
Probab=99.85 E-value=7e-21 Score=189.45 Aligned_cols=186 Identities=17% Similarity=0.148 Sum_probs=159.2
Q ss_pred cCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhh
Q psy1596 149 DKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQ 228 (375)
Q Consensus 149 ~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~ 228 (375)
++-+++++++..+++.+++++++.||+-+ +...|..|+|||||.+.+....|++.....+
T Consensus 108 N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~--------------------~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~ 167 (491)
T KOG1383|consen 108 NPLHPDEFPVVRKLEAECVNMIANLFNAP--------------------SDSCGCGTVGGSESGLAAKKSYRNRRKAQKG 167 (491)
T ss_pred CccCccccchhHHHHHHHHHHHHHHhcCC--------------------ccccCccccccchHHHHHHHHHHHHHHhccC
Confidence 67788888999999999999999999998 3367899999999988888877776533211
Q ss_pred ccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596 229 QSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG 307 (375)
Q Consensus 229 ~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~ 307 (375)
..++.++++...|.+++|+++..+.+++.||++ .+++||+.++.++|.+. .++||+.+|++.
T Consensus 168 -----------I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eN------ti~lv~~~~~~p 230 (491)
T KOG1383|consen 168 -----------IDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDEN------TIMLVGSLPNFP 230 (491)
T ss_pred -----------CCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccc------eEEEEEEcCCCC
Confidence 235678999999999999999999999999998 78999999999999886 459999999999
Q ss_pred ccccccHHHHHHHHHh-cCCEEEEecccccCccc--c---hhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 308 ACAFDNLEELGPICEK-EGLWLHVDAAYAGSSFI--C---PEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 308 tGavDpl~eI~~ia~~-~~iwlHVDaA~gg~~~~--~---~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
+|.+||+++|.++..+ +++.+|||+|-|++... . .++.. ++.++-|++.|.||.+++|.|.|.+
T Consensus 231 ~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdF---r~p~V~Sisa~~HKYGl~~~G~~~v 300 (491)
T KOG1383|consen 231 TGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDF---RVPGVTSISADGHKYGLAPAGSSWV 300 (491)
T ss_pred ccchhhHHHHHHHHHHHhCCceeecccCccccccccccCcccccc---CCCCceeEeeccceeeeeecCcEEE
Confidence 9999999999999998 99999999999998652 1 12222 3456799999999999999999875
No 20
>PLN02651 cysteine desulfurase
Probab=99.84 E-value=3.9e-20 Score=183.73 Aligned_cols=167 Identities=16% Similarity=0.147 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
.++.+++++.+++++|.+. ...+||+|+|+++..++..+.....
T Consensus 42 ~~~~~~~r~~la~~~g~~~---------------------~~v~~t~~~t~a~~~~l~~~~~~~~--------------- 85 (364)
T PLN02651 42 EDAVEKARAQVAALIGADP---------------------KEIIFTSGATESNNLAIKGVMHFYK--------------- 85 (364)
T ss_pred HHHHHHHHHHHHHHhCCCC---------------------CeEEEeCCHHHHHHHHHHHHHHhcc---------------
Confidence 3344788999999999862 3589999999999998877654211
Q ss_pred cCceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596 240 NSRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE 316 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e 316 (375)
.++..|+++...|.|+.+.+. ..+.+++.||+++++.+|+++|+++|+++ +.+|+++..++.+|.+.|+++
T Consensus 86 ~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~------t~lv~v~~~~n~tG~~~~l~~ 159 (364)
T PLN02651 86 DKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPD------TALVSVMAVNNEIGVIQPVEE 159 (364)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCC------cEEEEEECCCCCceecccHHH
Confidence 134578999999999888753 34678999999888999999999999654 347888999999999999999
Q ss_pred HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++|+++|+++|||+|++++..... +..+ .+|++++++||| +.|.|+|++|
T Consensus 160 I~~~~~~~g~~~~vD~a~~~g~~~~~-----~~~~-~~D~~~~s~hK~-~gp~G~g~l~ 211 (364)
T PLN02651 160 IGELCREKKVLFHTDAAQAVGKIPVD-----VDDL-GVDLMSISGHKI-YGPKGVGALY 211 (364)
T ss_pred HHHHHHHcCCEEEEEcchhhCCcccC-----cccC-CCCEEEechhhh-CCCCceEEEE
Confidence 99999999999999999999865332 1222 369999999998 6899999986
No 21
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.84 E-value=2.7e-20 Score=204.53 Aligned_cols=178 Identities=13% Similarity=0.060 Sum_probs=141.5
Q ss_pred hhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCc
Q psy1596 154 IVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPE 233 (375)
Q Consensus 154 ~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~ 233 (375)
....|+.+++.++.+||++++|++. ..+...||+++++.+|+++|.....+ +
T Consensus 535 e~~qG~l~~i~e~q~~l~eltG~d~----------------------~sl~~~~ga~ge~agL~a~r~~~~~~-G----- 586 (954)
T PRK05367 535 EQAAGYRELIDQLEAWLAEITGYDA----------------------VSLQPNAGAQGEYAGLLAIRAYHESR-G----- 586 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC----------------------EEECccHHHHHHHHHHHHHHHHhhcc-C-----
Confidence 3456889999999999999999982 22334577899999998887643211 0
Q ss_pred chhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 234 LEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 234 ~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
..++.+|++|+.+|.|+.+++.+.|.+++.||+|.+|++|+++|+++|+++. ..+++|++|.++|..+..||
T Consensus 587 -----~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~---~~la~V~it~pst~G~~e~~ 658 (954)
T PRK05367 587 -----EGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHA---DNLAAIMITYPSTHGVFEET 658 (954)
T ss_pred -----CCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccC---CCeEEEEEEcCCCCeeecCC
Confidence 0134589999999999999998889999999999899999999999997632 23778999999988444599
Q ss_pred HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
+++|+++|+++|+|+|||||++++...... .+--.||++++|+|||+++|+|+|
T Consensus 659 I~eI~~i~h~~G~~v~VDgA~~~al~~l~~-----pg~~GADi~~~s~HK~f~~P~G~G 712 (954)
T PRK05367 659 IREICEIVHEHGGQVYLDGANMNAQVGLAR-----PGDIGADVSHLNLHKTFCIPHGGG 712 (954)
T ss_pred HHHHHHHHHHcCCEEEEECcChhhccCCCC-----hhhcCCCEEEecCcccCCCCcCCC
Confidence 999999999999999999999765332111 122258999999999999999977
No 22
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.83 E-value=7e-20 Score=199.02 Aligned_cols=176 Identities=12% Similarity=0.033 Sum_probs=145.5
Q ss_pred hhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596 155 VILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL 234 (375)
Q Consensus 155 ~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~ 234 (375)
.-.|..++..++..||++++|++ ..++..++|+++++++|+++|.+...+ .
T Consensus 524 ~sqG~lq~i~elq~~l~eltGmd----------------------~~Sl~p~aGA~gE~agL~aiR~y~~~r--g----- 574 (939)
T TIGR00461 524 QVEGYQELIAQLEKWLCSITGFD----------------------AISLQPNSGAQGEYAGLRVIRSYHESR--G----- 574 (939)
T ss_pred HhHHHHHHHHHHHHHHHHHHCCC----------------------CcccCCchHHHHHHHHHHHHHHHHHhc--C-----
Confidence 34678899999999999999998 246788899999999999998754211 1
Q ss_pred hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596 235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN- 313 (375)
Q Consensus 235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp- 313 (375)
..++.+|++|+.+|.++.+++...|.+++.||+|++|++|+++|+++|++. +..+.+|++|.++| +|.+++
T Consensus 575 ----e~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~~ 646 (939)
T TIGR00461 575 ----ENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEPT 646 (939)
T ss_pred ----CCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhc---CCceEEEEEEeCCc-Cceeccc
Confidence 023568999999999999999888899999999999999999999999752 23477999999998 799977
Q ss_pred HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
+++|+++|+++|.|++||||+..+...... .|-..||++++|+||++++|.|+|
T Consensus 647 I~eI~~iah~~G~~v~VDgAq~~al~~l~~-----Pg~~GaDi~~~s~HKtf~~P~G~G 700 (939)
T TIGR00461 647 IQHACDIVHSFGGQVYLDGANMNAQVGLTS-----PGDLGADVCHLNLHKTFCIPHGGG 700 (939)
T ss_pred HHHHHHHHHHcCCEEEEEecChhhCCCCCC-----ccccCCCEEEecCCccCCCCCCCC
Confidence 999999999999999999999664332211 133358999999999999999884
No 23
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.81 E-value=5.5e-19 Score=178.00 Aligned_cols=164 Identities=15% Similarity=0.149 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
.+++++.+++++|.+. ...+||+|+|+++..++.+...... .++
T Consensus 49 ~~~~r~~la~~~g~~~---------------------~~v~~~~g~t~a~~~~l~~l~~~~~---------------~~g 92 (402)
T TIGR02006 49 VENARNQVAELIGADS---------------------REIVFTSGATESNNLAIKGIAHFYK---------------SKG 92 (402)
T ss_pred HHHHHHHHHHHhCCCC---------------------CeEEEeCCHHHHHHHHHHHHHHhhc---------------CCC
Confidence 3678899999999762 3589999999999988766543110 134
Q ss_pred eEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
..|+++..+|.|+..++. ..+.+++.||+++++.+|+++|+++|++. +.+|+++..++++|.+.|+++|++
T Consensus 93 ~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~------~~lv~v~~~~n~tG~~~~~~~I~~ 166 (402)
T TIGR02006 93 NHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDD------TILVSIMHVNNEIGVIQDIAAIGE 166 (402)
T ss_pred CEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCC------CEEEEEECCCcCceecccHHHHHH
Confidence 578999999999988763 24789999999989999999999998643 448888999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+|+++|+|+|||+|++.+..... +... .+|++++++||++ .|.|+|++|
T Consensus 167 l~~~~g~~livD~a~a~g~~~~~-----~~~~-~~D~~~~s~~K~~-gp~G~G~l~ 215 (402)
T TIGR02006 167 ICRERKVFFHVDAAQSVGKIPIN-----VNEL-KVDLMSISGHKIY-GPKGIGALY 215 (402)
T ss_pred HHHHcCCEEEEEcchhcCCcccC-----cccc-CCCEEEEehhhhc-CCCceEEEE
Confidence 99999999999999998865321 1121 4799999999965 699999985
No 24
>KOG1549|consensus
Probab=99.81 E-value=3.1e-19 Score=177.84 Aligned_cols=164 Identities=20% Similarity=0.164 Sum_probs=134.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++++.+|+|+|.+. .+.+||+|+||||.+++..--..... ..+-
T Consensus 88 E~aR~~VAklInAd~---------------------~dIiFts~ATEs~Nlvl~~v~~~~~~--------------~~~k 132 (428)
T KOG1549|consen 88 EAAREQVAKLINADP---------------------SDIVFTSGATESNNLVLKGVARFFGD--------------KTKK 132 (428)
T ss_pred HHHHHHHHHHhCCCC---------------------CcEEEeCCchHHHHHHHHHhhccccc--------------cccc
Confidence 688999999999982 23999999999998887653221100 0122
Q ss_pred EEEecCCCchHHHHHHH-H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL-I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~-l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
.|++.+.+|.|+.++++ + -|..++.||++++|-.|.+.|+++|+.++ .+|.+.+-+++.|.+.|++||+++
T Consensus 133 ~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T------~lv~I~~Vnn~~gv~~Pv~EI~~i 206 (428)
T KOG1549|consen 133 HIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKT------RLVSIMHVNNEIGVLQPVKEIVKI 206 (428)
T ss_pred eEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCc------eEEEEEecccCccccccHHHHHHH
Confidence 79999999999999985 2 46899999999999999999999999864 488999999999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++++.+|+|+||+.+..... .+. + .+|.+++++|||++.|- +|+||
T Consensus 207 cr~~~v~v~~DaAQavG~i~vD-V~e----l-n~D~~s~s~HK~ygp~~-iGaLY 254 (428)
T KOG1549|consen 207 CREEGVQVHVDAAQAVGKIPVD-VQE----L-NADFLSISAHKIYGPPG-IGALY 254 (428)
T ss_pred hCcCCcEEEeehhhhcCCcccc-HHH----c-CchheeeecccccCCCc-ceEEE
Confidence 9999999999999999976432 222 2 46999999999987554 99987
No 25
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.80 E-value=2.8e-18 Score=172.24 Aligned_cols=166 Identities=11% Similarity=0.010 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
...++.+.+++++|.+ ..+||+|||++|..++.+... +
T Consensus 64 ~~~~l~~~lA~~~g~~-----------------------~~~~~~g~t~a~~~al~~l~~-------------------~ 101 (387)
T PRK09331 64 PIADFHEDLAEFLGMD-----------------------EARVTHGAREGKFAVMHSLCK-------------------K 101 (387)
T ss_pred HHHHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHhcC-------------------C
Confidence 3488899999999986 258999999999888876532 3
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhh-cCCccEEEEEEcCCCCccccccHHHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKK-KHLIPFFVCGTLGTTGACAFDNLEELG 318 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~-~g~~p~~Vv~t~GtT~tGavDpl~eI~ 318 (375)
+..|+++..+|+|...++.+.|.+++.+|+ ++++.+|+++|+++|++..+ .+..+.+|+.+.+++.+|.+.|+++|+
T Consensus 102 gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~ 181 (387)
T PRK09331 102 GDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVA 181 (387)
T ss_pred CCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHH
Confidence 457899999999999998888899999998 67899999999999976421 123467888899999999999999999
Q ss_pred HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++|+++|+++|||+||+.+.+..+- +. . .+|.++.++|||++.|.++|+++
T Consensus 182 ~la~~~g~~livD~a~~~g~~~~~~-~~--~---g~D~~~~s~~K~l~~~~~~G~l~ 232 (387)
T PRK09331 182 KVAHEYGIPFLLNGAYTVGRMPVDG-KK--L---GADFIVGSGHKSMAASAPSGVLA 232 (387)
T ss_pred HHHHHcCCEEEEECCcccCCcCCCH-HH--c---CCCEEEeeCcccccCCCCEEEEE
Confidence 9999999999999999987642221 11 1 36999999999999999999874
No 26
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.80 E-value=1.6e-18 Score=172.64 Aligned_cols=165 Identities=19% Similarity=0.175 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
...+++++++++++|.+. ...+||+|||+++..++.+..... .
T Consensus 42 ~~~~~~r~~la~~~g~~~---------------------~~i~~t~~~t~a~~~al~~~~~~~----------------~ 84 (379)
T TIGR03402 42 KAVEEAREQVAKLLGAEP---------------------DEIIFTSGGTESDNTAIKSALAAQ----------------P 84 (379)
T ss_pred HHHHHHHHHHHHHhCCCC---------------------CeEEEeCcHHHHHHHHHHHHHHhc----------------C
Confidence 334788999999999862 358999999999999887664310 0
Q ss_pred CceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
++.+|+++..+|.++...+. ..|.+++.||.+++|.+|+++|+++|+++ +.+|+.+..++.+|.+.|+++|
T Consensus 85 ~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~------~~lv~i~~~~n~tG~~~~~~~I 158 (379)
T TIGR03402 85 EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDD------TALVSVMWANNETGTIFPIEEI 158 (379)
T ss_pred CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCC------cEEEEEEcccCCeeecccHHHH
Confidence 23478899999999887653 25789999999888999999999998653 4578888899999999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|+++|+++|+|++++.+....+ +.. ..+|++++++|| ++.|.|+|++|
T Consensus 159 ~~l~~~~g~~vivD~~~~~g~~~~~-----~~~-~~~D~~~~s~~K-~~gp~G~g~l~ 209 (379)
T TIGR03402 159 GEIAKERGALFHTDAVQAVGKIPID-----LKE-MNIDMLSLSGHK-LHGPKGVGALY 209 (379)
T ss_pred HHHHHHcCCEEEEECcccccccccC-----ccc-CCCCEEEEcHHH-cCCCCceEEEE
Confidence 9999999999999999998754221 111 147999999999 67899999986
No 27
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.79 E-value=2.4e-18 Score=170.59 Aligned_cols=164 Identities=15% Similarity=0.175 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
....++++++++++|.+ .....+||+|+|+++..++.+...
T Consensus 44 ~~~~~~~~~la~~~~~~--------------------~~~~v~~~~g~t~al~~~~~~~~~------------------- 84 (376)
T TIGR01977 44 REVEETRQLLAKLFNAP--------------------SSAHVVFTNNATTALNIALKGLLK------------------- 84 (376)
T ss_pred HHHHHHHHHHHHHhCcC--------------------CCCeEEEeCCHHHHHHHHHHhccC-------------------
Confidence 34478899999999987 233689999999998877654211
Q ss_pred CceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE 316 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e 316 (375)
++..|+++..+|.++..+. ...+.+++.|+.++++.+|+++|+++++++ +.+|+.+.++|++|.+.|+++
T Consensus 85 ~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~ 158 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEE 158 (376)
T ss_pred CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHH
Confidence 2457889999999887653 344789999999888999999999998543 558889999999999999999
Q ss_pred HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|.++|+++|++++||+|++.+...... . -..+|++++++|||++.|.|+|++|
T Consensus 159 i~~l~~~~~~~livD~a~~~g~~~~~~-~-----~~~~D~~~~s~~K~l~~p~g~g~l~ 211 (376)
T TIGR01977 159 IGELAQENGIFFILDAAQTAGVIPIDM-T-----ELAIDMLAFTGHKGLLGPQGTGGLY 211 (376)
T ss_pred HHHHHHHcCCEEEEEhhhccCccCCCc-h-----hcCCCEEEecccccccCCCCceEEE
Confidence 999999999999999999988653221 1 1247999999999999999999874
No 28
>PRK14012 cysteine desulfurase; Provisional
Probab=99.79 E-value=2.5e-18 Score=173.17 Aligned_cols=163 Identities=17% Similarity=0.179 Sum_probs=131.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++++++++++|.+. ..++||+|||+++.+++.+...... .++.
T Consensus 52 ~~~r~~ia~~~g~~~---------------------~~v~~~~g~t~al~~~l~~l~~~~~---------------~~gd 95 (404)
T PRK14012 52 DIARNQIADLIGADP---------------------REIVFTSGATESDNLAIKGAAHFYQ---------------KKGK 95 (404)
T ss_pred HHHHHHHHHHcCcCc---------------------CeEEEeCCHHHHHHHHHHHHHHhhc---------------CCCC
Confidence 678899999999862 3589999999999988876543210 1345
Q ss_pred EEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
.|+++..+|.|+..++. ..|.+++.|+++++|.+|+++|+++|+++ +.+|+++..++++|.+.|+++|.++
T Consensus 96 ~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~l 169 (404)
T PRK14012 96 HIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDD------TILVSIMHVNNEIGVIQDIAAIGEI 169 (404)
T ss_pred EEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCC------CEEEEEECcCCCccchhhHHHHHHH
Confidence 78999999999988764 24789999999989999999999999654 3488899999999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++|+++|+|+|++.+....+ +.. ..+|++++++||+ +.|.|+|++|
T Consensus 170 a~~~g~~vivD~a~~~g~~~~~-----~~~-~~~D~~~~s~~K~-~gp~g~G~l~ 217 (404)
T PRK14012 170 CRERGIIFHVDAAQSVGKVPID-----LSK-LKVDLMSFSAHKI-YGPKGIGALY 217 (404)
T ss_pred HHHcCCEEEEEcchhcCCcccC-----ccc-CCCCEEEEehhhc-cCCCceEEEE
Confidence 9999999999999998765322 111 1479999999995 5688999875
No 29
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.79 E-value=3.1e-18 Score=169.05 Aligned_cols=167 Identities=18% Similarity=0.175 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
.+.+++++++++++|.+. ...+||+|+|+++..++.+....... .
T Consensus 42 ~~~~~~r~~la~~~g~~~---------------------~~v~~~~g~t~a~~~~l~~l~~~~~~--------------~ 86 (353)
T TIGR03235 42 KAVERARKQVAEALGADT---------------------EEVIFTSGATESNNLAILGLARAGEQ--------------K 86 (353)
T ss_pred HHHHHHHHHHHHHhCCCC---------------------CeEEEeCCHHHHHHHHHHHHHHhccc--------------C
Confidence 445789999999999872 35899999999998887665432100 0
Q ss_pred CceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
.+..|+++...|.|+..+.. ..|.+++.||.++++.+|+++|++++++. +.+|+++.+++++|.+.|+++|
T Consensus 87 g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I 160 (353)
T TIGR03235 87 GKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPD------TLLVSIMHVNNETGSIQPIREI 160 (353)
T ss_pred CCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCC------CEEEEEEcccCCceeccCHHHH
Confidence 12579999999999988753 24789999999888999999999998542 4588889999999999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|+++|+|+|||+|++.+....+ +.. ..+|++++++||| +.|.|+|++|
T Consensus 161 ~~l~~~~~~~~ivD~a~~~g~~~~~-----~~~-~~~D~~~~s~~K~-~gp~g~g~l~ 211 (353)
T TIGR03235 161 AEVLEAHEAFFHVDAAQVVGKITVD-----LSA-DRIDLISCSGHKI-YGPKGIGALV 211 (353)
T ss_pred HHHHHHcCCEEEEEchhhcCCcccc-----ccc-cCCCEEEeehhhc-CCCCceEEEE
Confidence 9999999999999999998865322 111 1479999999999 5799999875
No 30
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.78 E-value=7.5e-18 Score=167.04 Aligned_cols=166 Identities=16% Similarity=0.128 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
+...++++++++++|.+ +....++|+|+|+++..++.+..... .
T Consensus 43 ~~~~~~~~~la~~~~~~--------------------~~~~v~~~~g~t~a~~~~~~~l~~~~----------------~ 86 (373)
T cd06453 43 DAYEAAREKVARFINAP--------------------SPDEIIFTRNTTEAINLVAYGLGRAN----------------K 86 (373)
T ss_pred HHHHHHHHHHHHHhCCC--------------------CCCeEEEeCCHHHHHHHHHHHhhhcC----------------C
Confidence 33478889999999987 33468899999999888776654310 0
Q ss_pred CceEEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE 316 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e 316 (375)
++..|++++.+|.+...+ ++..+.+++.|+.++++++|+++|++++.++ +.+|+.+.++|++|.++|+++
T Consensus 87 ~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~ 160 (373)
T cd06453 87 PGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTER------TKLVAVTHVSNVLGTINPVKE 160 (373)
T ss_pred CCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCC------ceEEEEeCcccccCCcCCHHH
Confidence 234788999999996543 3355789999999988999999999999653 447888999999999999999
Q ss_pred HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|.++|+++|+|||+|+||+.+....+ . ..+ .+|++++++|||++. .++|+++
T Consensus 161 i~~~~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~d~~~~s~~K~~~~-~g~g~~~ 212 (373)
T cd06453 161 IGEIAHEAGVPVLVDGAQSAGHMPVD-V----QDL-GCDFLAFSGHKMLGP-TGIGVLY 212 (373)
T ss_pred HHHHHHHcCCEEEEEhhhhcCceeee-c----ccc-CCCEEEeccccccCC-CCcEEEE
Confidence 99999999999999999987754221 1 111 469999999999876 7888764
No 31
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.77 E-value=7.5e-18 Score=174.16 Aligned_cols=172 Identities=16% Similarity=0.089 Sum_probs=133.7
Q ss_pred hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
..|+.+++.++.+|+++++|++. ..++.++|+.+++.++.++|.....+
T Consensus 108 sqG~lel~~~~~~~la~l~G~~~----------------------~~l~~~~GA~a~~~~l~~~r~~~~~~--------- 156 (481)
T PRK04366 108 VQGALELMYELQEWLKEITGMDA----------------------VTLQPAAGAHGELTGLLMIRAYHEAR--------- 156 (481)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCc----------------------eEEEeCcHHHHHHHHHHHHHHHhhcc---------
Confidence 45777888999999999999972 24666788888887776555422110
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccH
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNL 314 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl 314 (375)
+..++..|++++..|.++.+.+...|.+++.||++++|.+|+++|+++|.+++ .+|+++.++ .+|.+ +|+
T Consensus 157 --Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t------~~V~v~~Pn-~tG~~~~dl 227 (481)
T PRK04366 157 --GDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDT------AALMLTNPN-TLGLFERNI 227 (481)
T ss_pred --CcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCC------eEEEEeCCC-CccccchHH
Confidence 00123478999999999999998889999999998889999999999997543 367778877 78988 699
Q ss_pred HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
++|+++|+++|.|+|||+|+..+.+- .... +-..||++++|+||||++|+++|
T Consensus 228 ~eI~~~a~~~gal~iVD~a~~~~~~g--~~~~---~~~GaD~~~~~~hK~l~~P~g~G 280 (481)
T PRK04366 228 LEIAEIVHEAGGLLYYDGANLNAILG--KARP---GDMGFDVVHLNLHKTFSTPHGGG 280 (481)
T ss_pred HHHHHHHHHcCCEEEEEecChhhhcc--cCCc---cccCCCEEEEechhhcCCCCCCC
Confidence 99999999999999999999755221 1111 11247999999999999999886
No 32
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.76 E-value=5.2e-17 Score=161.50 Aligned_cols=168 Identities=18% Similarity=0.125 Sum_probs=137.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
..++-+++.+.+++++|.+ .....+|++|+|+++..++...+...
T Consensus 41 ~~~~~~~~r~~la~~lg~~--------------------~~~~v~~~~~~t~a~~~~~~~l~~~~--------------- 85 (371)
T PF00266_consen 41 FAEILEEAREALAKLLGAP--------------------PDEEVVFTSNGTEALNAVASSLLNPL--------------- 85 (371)
T ss_dssp HHHHHHHHHHHHHHHHTSS--------------------TTEEEEEESSHHHHHHHHHHHHHHHG---------------
T ss_pred hhHHHHHHHHHHHHhcCCc--------------------cccccccccccchhhhhhhhcccccc---------------
Confidence 3445578999999999998 32468999999998888777665421
Q ss_pred hcCceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596 239 INSRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL 314 (375)
Q Consensus 239 ~~~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl 314 (375)
.++..|+++...|+|...++ ...+.+++.||.+.++.+|+++++++|.++ +.+|+.++.++.+|.+.|+
T Consensus 86 -~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~------~~lv~~~~~~~~tG~~~pi 158 (371)
T PF00266_consen 86 -KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPD------TRLVSISHVENSTGVRNPI 158 (371)
T ss_dssp -TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTT------ESEEEEESBETTTTBBSSH
T ss_pred -ccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccc------cceEEeecccccccEEeee
Confidence 13457999999999999654 246889999999889999999999999754 4489999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++|+++|+++|++++||++++.+.+..+ +..+ .+|.+++++|| ++.|.|+|++|
T Consensus 159 ~~I~~~~~~~~~~~~vD~~~~~g~~~id-----~~~~-~~D~~~~s~~K-l~gp~G~g~l~ 212 (371)
T PF00266_consen 159 EEIAKLAHEYGALLVVDAAQSAGCVPID-----LDEL-GADFLVFSSHK-LGGPPGLGFLY 212 (371)
T ss_dssp HHHHHHHHHTTSEEEEE-TTTTTTSS-------TTTT-TESEEEEESTS-TTSSSTEEEEE
T ss_pred ceehhhhhccCCceeEechhcccccccc-----cccc-ccceeeecccc-cCCCCchhhhe
Confidence 9999999999999999999999876432 1222 47999999999 88899999986
No 33
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.76 E-value=4.3e-17 Score=161.65 Aligned_cols=164 Identities=12% Similarity=0.040 Sum_probs=132.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..++|+|||+++..++.+... ++.
T Consensus 47 ~~l~~~la~~~g~~-----------------------~i~~~~g~t~al~~~l~~~~~-------------------~gd 84 (361)
T cd06452 47 KDFHHDLAEFLGMD-----------------------EARVTPGAREGKFAVMHSLCE-------------------KGD 84 (361)
T ss_pred HHHHHHHHHHcCCc-----------------------eEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence 78889999999885 378999999998888765422 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCC--CcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKL--SLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g--~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
.|+++..+|++...++...|.+++.||.+.++ .+|+++|++++++..++ +..+.+|+++.+++.+|.++|+++|+++
T Consensus 85 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~ 164 (361)
T cd06452 85 WVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKV 164 (361)
T ss_pred EEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHH
Confidence 78899999999998888888999999987654 89999999999753321 2236688889999999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++|+++|+|+||+.+....+. .. . .+|.++.++||+++.|.++|+++
T Consensus 165 ~~~~~~~vivD~a~~~g~~~~~~-~~--~---~~d~~~~s~~K~l~~~~~~G~l~ 213 (361)
T cd06452 165 CHEYGVPLLLNGAYTVGRMPVSG-KE--L---GADFIVGSGHKSMAASAPIGVLA 213 (361)
T ss_pred HHHcCCeEEEECCcccCCcCCCH-HH--c---CCCEEEecCCccccCCCCeEEEE
Confidence 99999999999999976531111 11 1 36999999999999888888763
No 34
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.75 E-value=2.6e-17 Score=162.13 Aligned_cols=167 Identities=12% Similarity=-0.066 Sum_probs=131.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
..++.+++++++++++|.+ .....++|+|||+++..++.+...
T Consensus 30 ~~~~~~~~~~~la~~~g~~--------------------~~~~~~~~~~~t~al~~~~~~~~~----------------- 72 (356)
T cd06451 30 FLALMDEILEGLRYVFQTE--------------------NGLTFLLSGSGTGAMEAALSNLLE----------------- 72 (356)
T ss_pred HHHHHHHHHHHHHHHhcCC--------------------CCCEEEEecCcHHHHHHHHHHhCC-----------------
Confidence 4455578999999999986 233478999999998888765421
Q ss_pred hcCceEEEecCCCchHH--HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596 239 INSRLVAYCSDQAHSSV--EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE 316 (375)
Q Consensus 239 ~~~~~vV~~S~~aH~Sv--~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e 316 (375)
++..|+++...|++. ...++..+.+++.+|.++++.+|+++|++++++. .|.+|+++.+++.+|.+.|+++
T Consensus 73 --~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~~~~ 145 (356)
T cd06451 73 --PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQH-----DIKAVTLTHNETSTGVLNPLEG 145 (356)
T ss_pred --CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhcc-----CCCEEEEeccCCCcccccCHHH
Confidence 234677888888873 4555667789999999888899999999999751 1457888888999999999999
Q ss_pred HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++|+++|+++++|++|+.+....+- .. ..+|.++.++|||++.|.|+|+++
T Consensus 146 i~~~a~~~~~~li~D~~~~~g~~~~~~-----~~-~~~d~~~~s~~K~l~~p~g~G~l~ 198 (356)
T cd06451 146 IGALAKKHDALLIVDAVSSLGGEPFRM-----DE-WGVDVAYTGSQKALGAPPGLGPIA 198 (356)
T ss_pred HHHHHHhcCCEEEEeeehhccCccccc-----cc-cCccEEEecCchhccCCCCcceeE
Confidence 999999999999999999866432111 01 136999999999999999999874
No 35
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.75 E-value=2.6e-17 Score=165.19 Aligned_cols=164 Identities=16% Similarity=0.108 Sum_probs=129.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++++.+++++|.+ .+...+||+|+|+++..++.+..... ..++.
T Consensus 65 ~~~r~~ia~~~~~~--------------------~~~~v~~~~g~t~~l~~~~~~~~~~~---------------~~~g~ 109 (403)
T TIGR01979 65 EAVREKVAKFINAA--------------------SDEEIVFTRGTTESINLVAYSWGDSN---------------LKAGD 109 (403)
T ss_pred HHHHHHHHHHhCcC--------------------CCCeEEEeCCHHHHHHHHHHHhhhhc---------------CCCCC
Confidence 67889999999987 33468999999999776665432210 01345
Q ss_pred EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++.+|.|... .+...|.+++.||++++|.+|+++|++++.++ +.+|+.+.+++.+|.+.|+++|++
T Consensus 110 ~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~------~~lv~~~~~~~~tG~~~~~~~i~~ 183 (403)
T TIGR01979 110 EIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEK------TKLVAITHVSNVLGTVNPVEEIAK 183 (403)
T ss_pred EEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccC------CeEEEEEcccccccccCCHHHHHH
Confidence 79999999988653 34456789999999989999999999998653 558889999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+|+++|+++|||+||+.+.... .. ... .+|.+++++||++ .|.|+|++|
T Consensus 184 ~~~~~~~~~ivD~a~~~g~~~~-~~----~~~-~~d~~~~s~~K~~-gp~G~g~l~ 232 (403)
T TIGR01979 184 LAHQVGAKVLVDGAQAVPHMPV-DV----QAL-DCDFYVFSGHKMY-GPTGIGVLY 232 (403)
T ss_pred HHHHcCCEEEEEchhhcCcccc-Cc----ccc-CCCEEEEeccccc-CCCCceEEE
Confidence 9999999999999998875421 11 111 3699999999975 588999875
No 36
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.75 E-value=2.7e-17 Score=159.66 Aligned_cols=188 Identities=19% Similarity=0.158 Sum_probs=142.4
Q ss_pred hhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHH
Q psy1596 132 GKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASES 211 (375)
Q Consensus 132 ~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~A 211 (375)
+++.+.+...|.-+. .|.+|+.+ .++.+.++++||.+ ..+|+++||+|
T Consensus 9 ~~m~~a~~~a~~gd~-~Yg~D~~~--------~~l~~~i~~l~g~e-----------------------~a~f~~sGT~A 56 (290)
T PF01212_consen 9 PAMLEAMAAANVGDD-AYGEDPTT--------ARLEERIAELFGKE-----------------------AALFVPSGTMA 56 (290)
T ss_dssp HHEEHHHHHTTSB-C-CTTSSHHH--------HHHHHHHHHHHTSS-----------------------EEEEESSHHHH
T ss_pred HHHHHHHHccccCCc-ccCCChhH--------HHHHHHHHHHcCCC-----------------------EEEEeCCCChH
Confidence 456666655565444 78888888 99999999999998 25899999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHH--H-HHcCCeEEEEecCCCCCcCHHHHHHHHHH
Q psy1596 212 TLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKA--G-LIGLVKMRYIESDDKLSLRGDKLIEAIER 288 (375)
Q Consensus 212 nl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka--a-~lg~~~v~~Vp~d~~g~md~e~Le~aI~~ 288 (375)
|.+++.+... +...|++.+.+|..+.+. . .+.|.+++.|+.+++|+||+++|++++++
T Consensus 57 n~~al~~~~~-------------------~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~ 117 (290)
T PF01212_consen 57 NQLALRAHLR-------------------PGESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEE 117 (290)
T ss_dssp HHHHHHHHHH-------------------TTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHH
T ss_pred HHHHHHHHHh-------------------cCCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhh
Confidence 9999988763 234789999999988874 2 57899999999877799999999999988
Q ss_pred hhhcCCccEEEEEEcCCCCc-ccc---ccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCc
Q psy1596 289 DKKKHLIPFFVCGTLGTTGA-CAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPS 362 (375)
Q Consensus 289 ~~~~g~~p~~Vv~t~GtT~t-Gav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~H 362 (375)
......+|.+|..+..++.. |.+ +.|++|.++|+++|+.+|+|||.-+.+... ...+... ..+|++++++.
T Consensus 118 ~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~t 194 (290)
T PF01212_consen 118 HGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGT 194 (290)
T ss_dssp HTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETT
T ss_pred ccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEE
Confidence 55433446666666655443 654 788899999999999999999987665422 1234444 45799999999
Q ss_pred ccCCCCCccee
Q psy1596 363 KWLMVHFDCTA 373 (375)
Q Consensus 363 K~l~~P~~~g~ 373 (375)
|.+++|.|.=+
T Consensus 195 K~~g~~~Gavl 205 (290)
T PF01212_consen 195 KNGGAPGGAVL 205 (290)
T ss_dssp STT-SSSEEEE
T ss_pred cccccccceEE
Confidence 99999987543
No 37
>PRK02948 cysteine desulfurase; Provisional
Probab=99.74 E-value=3.7e-17 Score=162.96 Aligned_cols=166 Identities=13% Similarity=0.058 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
.+.+++++++++++|.+. ...+||+|+|+++..++.+...... .
T Consensus 43 ~~~~~~r~~la~~~g~~~---------------------~~i~~~~g~t~a~~~~~~~~~~~~~---------------~ 86 (381)
T PRK02948 43 SLLQVCRKTFAEMIGGEE---------------------QGIYFTSGGTESNYLAIQSLLNALP---------------Q 86 (381)
T ss_pred HHHHHHHHHHHHHhCCCC---------------------CeEEEeCcHHHHHHHHHHHHHHhcc---------------C
Confidence 445788999999999762 3578999999999988876643210 1
Q ss_pred CceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
++.+|+++...|.|+...+. ..|.+++.||++++|.+|+++|++++++. +.+|+.+.++++||.+.|+++|
T Consensus 87 ~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I 160 (381)
T PRK02948 87 NKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPD------TVLASIQHANSEIGTIQPIAEI 160 (381)
T ss_pred CCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCC------CEEEEEECCcCCcEeehhHHHH
Confidence 23578899999999888753 45789999999888999999999988643 4588999999999999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|+++|+++|||++++.+..... +.. ..+|.+++++||++ .|.|+|++|
T Consensus 161 ~~l~~~~~~~vivD~~~~~g~~~~~-----~~~-~~~d~~~~s~~K~~-gp~G~G~l~ 211 (381)
T PRK02948 161 GALLKKYNVLFHSDCVQTFGKLPID-----VFE-MGIDSLSVSAHKIY-GPKGVGAVY 211 (381)
T ss_pred HHHHHHcCCEEEEEChhhccccccC-----ccc-CCCCEEEecHHhcC-CCCcEEEEE
Confidence 9999999999999999887653211 111 14799999999975 599999874
No 38
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.74 E-value=2.1e-17 Score=159.97 Aligned_cols=164 Identities=14% Similarity=0.017 Sum_probs=127.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+. ..++|+|+|++|..++.+... ++.
T Consensus 62 ~~~~~~~A~~~ga~~----------------------~~~~~~Gst~a~~~~l~al~~-------------------~gd 100 (294)
T cd00615 62 KEAQELAARAFGAKH----------------------TFFLVNGTSSSNKAVILAVCG-------------------PGD 100 (294)
T ss_pred HHHHHHHHHHhCCCC----------------------EEEEcCcHHHHHHHHHHHcCC-------------------CCC
Confidence 788899999999761 234588889999888776532 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCC--C----CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD--K----LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~----g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
.|+++..+|.|+..++.+.+.+++.++++. + +.+|+++|++++++.. .+.+|+.+.+ |.+|.+.|+++|
T Consensus 101 ~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I 175 (294)
T cd00615 101 KILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKI 175 (294)
T ss_pred EEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHH
Confidence 899999999999999988888888887642 2 4799999999997532 2557777877 679999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
+++|+++|++++||+||++...+.+.+...... ..+|.++.++||++..|.++|++
T Consensus 176 ~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~-~~~div~~S~hK~l~g~~~~~~l 231 (294)
T cd00615 176 VEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM-AGADIVVQSTHKTLPALTQGSMI 231 (294)
T ss_pred HHHHHhcCCeEEEECcchhhhccCcccCcchhh-cCCcEEEEchhcccchHhHHHHH
Confidence 999999999999999999865444432211111 25799999999999887777664
No 39
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.74 E-value=3.5e-17 Score=179.87 Aligned_cols=171 Identities=16% Similarity=0.093 Sum_probs=139.7
Q ss_pred hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH----HHHHHHHHHHHHHHHHHhhccC
Q psy1596 156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS----ESTLICLLAGRTEAIRKYQQSH 231 (375)
Q Consensus 156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT----~Anl~AL~aar~~~~~~~~~~~ 231 (375)
..|..++-.++.+||++++|++ ..+||+++| +++++++.+..+.. +
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~~-----------------------~v~f~pnaga~ge~a~~~vi~~~~~~~----G--- 612 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGFD-----------------------SFSLQPNAGAAGEYAGLMVIRAYHLSR----G--- 612 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-----------------------eEEEcCCCcHHHHHHHHHHHHHHHhcc----C---
Confidence 4688888899999999999997 379999999 88887777653210 0
Q ss_pred CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
...+.+|+++..+|.++.+++.+.|.+++.||+|++|.+|+++|+++|++.++ ...+|++|.++|..|.+
T Consensus 613 -------d~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e 682 (993)
T PLN02414 613 -------DHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYE 682 (993)
T ss_pred -------CCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCC---CeEEEEEECCCcccccc
Confidence 01345899999999999999988899999999999999999999999985332 24589999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC 371 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~ 371 (375)
+||++|+++|+++|+.++||||+..+...... .+--.+|.++++.|||++.|.|.
T Consensus 683 ~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~-----p~~~GaD~~~~s~HK~f~~P~G~ 737 (993)
T PLN02414 683 EGIDEICDIIHDNGGQVYMDGANMNAQVGLTS-----PGFIGADVCHLNLHKTFCIPHGG 737 (993)
T ss_pred chHHHHHHHHHHcCCEEEEEecCHHhccCcCC-----ccccCCCEEEecCCccCCcCccc
Confidence 99999999999999999999999776422111 01124799999999999999983
No 40
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.7e-17 Score=161.71 Aligned_cols=193 Identities=17% Similarity=0.228 Sum_probs=151.4
Q ss_pred chhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC
Q psy1596 127 FQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT 206 (375)
Q Consensus 127 ~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts 206 (375)
.....+++.+.+...|.+....|+.|+.+ +++.+++++++|.. .++|++
T Consensus 9 ~~g~~~~m~eam~~a~~~~~~~YG~D~~~--------~~~e~~~ae~~g~~-----------------------a~~Fv~ 57 (342)
T COG2008 9 VAGPTPEMREALAAANAVGDDVYGEDPTT--------NALEQRIAELFGKE-----------------------AALFVP 57 (342)
T ss_pred cCCCCHHHHHHHHhccccCCCCCCCCHHH--------HHHHHHHHHHhCCc-----------------------eEEEec
Confidence 44556788889999998888899999888 99999999999874 489999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH---HHcCCeEEEEecCCCCCcCHHHHH
Q psy1596 207 TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG---LIGLVKMRYIESDDKLSLRGDKLI 283 (375)
Q Consensus 207 GGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa---~lg~~~v~~Vp~d~~g~md~e~Le 283 (375)
+||+||.++|.+..+ +...|+|.+.+|....++. .++++..+.+...++|+|++++|+
T Consensus 58 sGT~aN~lal~~~~~-------------------~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~ 118 (342)
T COG2008 58 SGTQANQLALAAHCQ-------------------PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVE 118 (342)
T ss_pred CccHHHHHHHHHhcC-------------------CCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHH
Confidence 999999999988754 2347999999999998853 356666666655689999999999
Q ss_pred HHHHHhh-hcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEE
Q psy1596 284 EAIERDK-KKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSI 357 (375)
Q Consensus 284 ~aI~~~~-~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi 357 (375)
.+|..+. ....+|.++..|.-| +.|.| |.|++|.++|+++|+.||+|||.-+.++.. +..+.+.. .+||+
T Consensus 119 ~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~---~~D~v 194 (342)
T COG2008 119 AAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKS---YVDSV 194 (342)
T ss_pred HhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHh---hCCEE
Confidence 9998643 334456666666554 77987 667777889999999999999987776543 22233333 46999
Q ss_pred EEcCcccCCCCCccee
Q psy1596 358 AFNPSKWLMVHFDCTA 373 (375)
Q Consensus 358 ~~d~HK~l~~P~~~g~ 373 (375)
+|.+.|.|+.|.++=+
T Consensus 195 ~~~~tK~g~~~~gAiv 210 (342)
T COG2008 195 SFCLTKGGGAPVGAIV 210 (342)
T ss_pred EEecccCCcceeeeEE
Confidence 9999999999887533
No 41
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.74 E-value=5.4e-17 Score=162.00 Aligned_cols=150 Identities=17% Similarity=0.219 Sum_probs=118.3
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCC
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLS 276 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~ 276 (375)
...+||+|+|+++..++.+....... + .++..|+++..+|.|+..++. ..|.+++.||++++|.
T Consensus 61 ~~i~~t~g~teal~~~~~~~~~~~~~--~-----------~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~ 127 (382)
T TIGR03403 61 DDIIITSCATESNNWVLKGVYFDEIL--K-----------GGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGT 127 (382)
T ss_pred CeEEEeCCHHHHHHHHHHHHHHhhcc--c-----------CCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCC
Confidence 46899999999998887755321000 0 013468999999999988753 3578999999998899
Q ss_pred cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccE
Q psy1596 277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANS 356 (375)
Q Consensus 277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDS 356 (375)
+|+++|++++++. +.+|+++.+++++|.+.|+++|.++|+++|+++|||++++.+....+ .. . ..+|+
T Consensus 128 ~d~~~l~~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~-~~--~---~~~D~ 195 (382)
T TIGR03403 128 ITAEQVREAITEK------TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVD-VQ--K---AGVDF 195 (382)
T ss_pred CCHHHHHHhcccC------CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccC-cc--c---cCCCE
Confidence 9999999998654 34788899999999999999999999999999999999998754321 11 1 24799
Q ss_pred EEEcCcccCCCCCcceeeC
Q psy1596 357 IAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 357 i~~d~HK~l~~P~~~g~l~ 375 (375)
+++++||| +.|.|+|++|
T Consensus 196 ~~~s~~K~-~gp~G~g~l~ 213 (382)
T TIGR03403 196 LSFSAHKF-HGPKGVGGLY 213 (382)
T ss_pred EEEcchhh-CCCCceEEEE
Confidence 99999998 5699999875
No 42
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.74 E-value=5.4e-17 Score=165.59 Aligned_cols=161 Identities=12% Similarity=0.021 Sum_probs=118.2
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
|..+...+...|+++++|++. ..+++|+|||+++..+++ ++..
T Consensus 109 g~~~~~~e~~~~la~l~g~~~---------------------~~v~~~~g~t~~~~~~~~-a~~~--------------- 151 (447)
T PRK00451 109 GTLQAIFEYQTMICELTGMDV---------------------ANASMYDGATALAEAALM-AVRI--------------- 151 (447)
T ss_pred HHHHHHHHHHHHHHHHhCCCc---------------------ceEEecCcHHHHHHHHHH-HHHh---------------
Confidence 344444677789999999982 247899999985544443 3321
Q ss_pred hhcCceEEEecCCCchHHHHHHHH----cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 238 EINSRLVAYCSDQAHSSVEKAGLI----GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 238 ~~~~~~vV~~S~~aH~Sv~kaa~l----g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
.++..|++++.+|.++.+++.. .|.+++.||++++ ++|+++|+++|+++ +.+|+++.+ |.+|.++|
T Consensus 152 --~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~------t~~v~l~~p-n~tG~v~~ 221 (447)
T PRK00451 152 --TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDD------TAAVVVQYP-NFFGVIED 221 (447)
T ss_pred --cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCC------eEEEEEECC-CCCCeeCC
Confidence 0234788999999999998753 5789999999877 99999999999654 346777777 78999999
Q ss_pred HHHHHHHHHhcCCEEEE--ecccccCcccchhhhhhhcCCCcccEEEEcCccc-----CCCCCcceee
Q psy1596 314 LEELGPICEKEGLWLHV--DAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKW-----LMVHFDCTAM 374 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHV--DaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~-----l~~P~~~g~l 374 (375)
+++|+++|+++|+|++| |... .+.+..+ +--.+|.++.++||| ++.| ++|.+
T Consensus 222 l~~I~~~a~~~~~~~iv~~d~~~-~g~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l 280 (447)
T PRK00451 222 LEEIAEIAHAGGALFIVGVDPVS-LGLLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFF 280 (447)
T ss_pred HHHHHHHHHHCCCEEEEEcChHH-hccCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHH
Confidence 99999999999999998 6442 2222111 112579999999997 3334 56654
No 43
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.73 E-value=6e-17 Score=163.20 Aligned_cols=165 Identities=12% Similarity=0.014 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
.+++++.+++++|.+ ++...+||+|+|+++..++.+..... ..++
T Consensus 69 ~~~~r~~la~~~~~~--------------------~~~~v~~t~g~t~~l~~~~~~~~~~~---------------~~~g 113 (406)
T PRK09295 69 MENVRKQAALFINAR--------------------SAEELVFVRGTTEGINLVANSWGNSN---------------VRAG 113 (406)
T ss_pred HHHHHHHHHHHcCcC--------------------CCCeEEEeCCHHHHHHHHHHHhhhhc---------------CCCc
Confidence 367889999999974 23468999999999877665432110 0134
Q ss_pred eEEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG 318 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~ 318 (375)
..|++++.+|.+.... ++..+.+++.||.++++.+|+++|+++++++ +.+|+++..++.+|.+.|+++|+
T Consensus 114 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~------t~lv~l~~~~n~tG~~~~~~~i~ 187 (406)
T PRK09295 114 DNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDER------TRLLAITHVSNVLGTENPLAEMI 187 (406)
T ss_pred CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCC------cEEEEEecchhcccccCCHHHHH
Confidence 5799999999876443 3456789999999888999999999998653 45888899999999999999999
Q ss_pred HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++|+++|++++||+||+.+....+ +.. ..+|.+++++|| ++.|.|+|++|
T Consensus 188 ~~~~~~~~~vivD~a~~~g~~~~~-----~~~-~~~D~~~~s~~K-~~gp~G~G~l~ 237 (406)
T PRK09295 188 ALAHQHGAKVLVDGAQAVMHHPVD-----VQA-LDCDFYVFSGHK-LYGPTGIGILY 237 (406)
T ss_pred HHHHHcCCEEEEEcccccCccccC-----chh-cCCCEEEeehhh-ccCCCCcEEEE
Confidence 999999999999999988754221 111 146999999999 55699999875
No 44
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.73 E-value=8.8e-17 Score=161.34 Aligned_cols=164 Identities=12% Similarity=-0.003 Sum_probs=128.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++.+++++|.+ ++...+||+|+|+++..++.+..... ..++.
T Consensus 63 ~~~r~~la~~~g~~--------------------~~~~i~~t~g~t~~l~~~~~~~~~~~---------------~~~gd 107 (398)
T TIGR03392 63 ELARQQVARFLNAP--------------------DAENIVWTRGTTESINLVAQSYARPR---------------LQPGD 107 (398)
T ss_pred HHHHHHHHHHhCCC--------------------CCCeEEEeCChHHHHHHHHHHhhhcc---------------CCCCC
Confidence 67889999999985 23468999999999887776542100 01345
Q ss_pred EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++.+|.|... .+...|.+++.||++.++.+|+++|+++|.+. +.+|+.+..++.+|.+.|+++|++
T Consensus 108 ~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~i~~ 181 (398)
T TIGR03392 108 EIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR------TRILALGQMSNVTGGCPDLARAIT 181 (398)
T ss_pred EEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC------ceEEEEECccccccccCCHHHHHH
Confidence 79999999988533 34566889999999888899999999999654 347888899999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+|+++|++++||++|+.+.... ... .+ .+|.+++++||+ +.|.|+|++|
T Consensus 182 ~~~~~~~~~ivD~a~~~~~~~~-~~~----~~-~~d~~~~s~~K~-~gp~G~G~l~ 230 (398)
T TIGR03392 182 LAHQYGAVVVVDGAQGVVHGPP-DVQ----AL-DIDFYAFSGHKL-YGPTGIGVLY 230 (398)
T ss_pred HHHHcCCEEEEEhhhhcCCCCC-Chh----hc-CCCEEEEecccc-cCCCceEEEE
Confidence 9999999999999998765321 211 11 369999999995 5688999875
No 45
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.73 E-value=1.4e-16 Score=159.24 Aligned_cols=170 Identities=15% Similarity=0.093 Sum_probs=127.0
Q ss_pred CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596 152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH 231 (375)
Q Consensus 152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~ 231 (375)
++....|..++++++.+++++++|.+. ...+++++|+.+...++.+++...
T Consensus 55 ~~~~~~g~~~~~~~~~~~la~~~g~~~---------------------~~v~~~~~g~~~~~~~~~~~~~~~-------- 105 (398)
T cd00613 55 QPEISQGRLQALFELQTMLCELTGMDV---------------------ANASLQDEATAAAEAAGLAAIRAY-------- 105 (398)
T ss_pred ChhhhhhHHHHHHHHHHHHHHHHCCCc---------------------cceeccCchHHHHHHHHHHHHhcc--------
Confidence 344457788888999999999999872 135677766655544444443210
Q ss_pred CcchhhhhcCceEEEecCCCchHHHHHHHHcC----CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596 232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGL----VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG 307 (375)
Q Consensus 232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~----~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~ 307 (375)
.++..|++++..|.+...++.+.+ .+++.||+++++.+|+++|++++.++ +.+|+++.++ .
T Consensus 106 --------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------t~~viv~~~~-~ 170 (398)
T cd00613 106 --------HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE------VAALMVQYPN-T 170 (398)
T ss_pred --------cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC------eEEEEEECCC-C
Confidence 024578899999999999886544 78999999878899999999998543 3467777775 6
Q ss_pred ccccccH-HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 308 ACAFDNL-EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 308 tGavDpl-~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
+|.+.++ ++|+++|+++|+|+++|++++.+...... +-..+|+++.++|||+ .|+++|
T Consensus 171 ~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~------~~~~~d~~~~s~~K~~-~p~g~G 229 (398)
T cd00613 171 LGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPP------GEYGADIVVGNLQKTG-VPHGGG 229 (398)
T ss_pred CceecchHHHHHHHHHhcCCEEEEEeccccccCCCCh------HHcCCCEEEeeccccC-CCCCCC
Confidence 8999885 99999999999999999998765432211 1114799999999999 887655
No 46
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.72 E-value=1.2e-16 Score=138.90 Aligned_cols=163 Identities=20% Similarity=0.061 Sum_probs=125.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.++++++++.+ ...+++++|||+|+..++.+++. ++.
T Consensus 3 ~~~~~~l~~~~~~~---------------------~~~~~~~~~~t~a~~~~~~~~~~-------------------~~~ 42 (170)
T cd01494 3 EELEEKLARLLQPG---------------------NDKAVFVPSGTGANEAALLALLG-------------------PGD 42 (170)
T ss_pred HHHHHHHHHHcCCC---------------------CCcEEEeCCcHHHHHHHHHHhCC-------------------CCC
Confidence 57889999999722 24589999999999999887643 123
Q ss_pred EEEecCCCchHHH-HHHHHcCCeEEEEecCCCCCcCHH--HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVE-KAGLIGLVKMRYIESDDKLSLRGD--KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~-kaa~lg~~~v~~Vp~d~~g~md~e--~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
.|++++..|.+.. ..+...+.+++.++.++++..+.+ .+++.. ....|.+++.+..++.+|...|+++|+++
T Consensus 43 ~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~ 117 (170)
T cd01494 43 EVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKI 117 (170)
T ss_pred EEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHH
Confidence 6888999999888 677778889999998765544332 333322 23347789999999999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++|+++|+|+||+++....+... .....+|.++.++|||++. .++|+++
T Consensus 118 ~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~ 168 (170)
T cd01494 118 AKEYGILLLVDAASAGGASPAPGVL---IPEGGADVVTFSLHKNLGG-EGGGVVI 168 (170)
T ss_pred HHHcCCEEEEecccccccccccccc---cccccCCEEEEEcccccCC-CceEEEE
Confidence 9999999999999999876432211 1124589999999999988 7888874
No 47
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.72 E-value=1.5e-16 Score=159.88 Aligned_cols=165 Identities=13% Similarity=0.047 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
-+++++.+++++|.+ ++...+||+|+|+++..++.+..... ..++
T Consensus 65 ~~~~r~~la~~~g~~--------------------~~~~i~~~~~~t~~i~~~~~~~~~~~---------------~~~g 109 (401)
T PRK10874 65 YEAAREQVAQLLNAP--------------------DAKNIVWTRGTTESINLVAQSYARPR---------------LQPG 109 (401)
T ss_pred HHHHHHHHHHHcCCC--------------------CCCEEEEECCHHHHHHHHHHHhhhcc---------------CCCc
Confidence 378889999999984 23468999999999877765542100 0134
Q ss_pred eEEEecCCCchHHH----HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596 243 LVAYCSDQAHSSVE----KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG 318 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~----kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~ 318 (375)
..|++++.+|.|.. +.++..|.+++.||.++++.+|+++|+++|+++ +.+|+.+..++.||.+.|+++|+
T Consensus 110 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~i~ 183 (401)
T PRK10874 110 DEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPR------TRILALGQMSNVTGGCPDLARAI 183 (401)
T ss_pred CEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcC------cEEEEEeCCcccccCcCCHHHHH
Confidence 57999999998753 334556789999999888999999999999654 44788899999999999999999
Q ss_pred HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++|+++|++++||+||+.+.... .. ..+ .+|.+++++||+ +.|.|+|++|
T Consensus 184 ~l~~~~g~~~ivD~a~~~g~~~~-~~----~~~-~~d~~~~s~~K~-~gp~G~G~l~ 233 (401)
T PRK10874 184 TLAHQAGMVVMVDGAQGAVHFPA-DV----QAL-DIDFYAFSGHKL-YGPTGIGVLY 233 (401)
T ss_pred HHHHHcCCEEEEECCcccccccC-Cc----hhc-CCCEEEEecccc-cCCCccEEEE
Confidence 99999999999999998765422 11 122 379999999995 6799999875
No 48
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.69 E-value=6e-16 Score=153.32 Aligned_cols=165 Identities=7% Similarity=-0.036 Sum_probs=128.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+. +....++|+|||+++..++.+... .++.
T Consensus 38 ~~~r~~la~l~~~~~-------------------~~~~i~~t~~~t~al~~~~~~l~~------------------~~~~ 80 (363)
T TIGR02326 38 EQIRQQLLALATAEE-------------------GYTSVLLQGSGTFAVEAVIGSAVP------------------KDGK 80 (363)
T ss_pred HHHHHHHHHHhCCCC-------------------CceEEEEcCCCHHHHHHHHHhcCC------------------CCCe
Confidence 678999999999972 223578999999999887765422 0233
Q ss_pred EEEecCCCchHH-HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 244 VAYCSDQAHSSV-EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 244 vV~~S~~aH~Sv-~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
+++++...|.+. .+.+...|.+++.||+++++.+|+++|++++++... +.+|+.+...|.||.+.|+++|+++|+
T Consensus 81 vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~i~~I~~l~~ 156 (363)
T TIGR02326 81 LLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPA----ITHIALVHCETTTGILNPIEAVAKLAH 156 (363)
T ss_pred EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCC----ccEEEEEeecCCccccCcHHHHHHHHH
Confidence 566666666663 455666778999999988899999999999976422 335777888999999999999999999
Q ss_pred hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++|++++||++++.+....+ +..+ .+|.++.++|||++.|.|.|+++
T Consensus 157 ~~g~~livD~~~~~g~~~~~-----~~~~-~~D~~~~s~~K~l~~p~G~G~l~ 203 (363)
T TIGR02326 157 RHGKVTIVDAMSSFGGIPID-----IAEL-HIDYLISSANKCIQGVPGFGFVI 203 (363)
T ss_pred HcCCEEEEEccccccCcccc-----hhhc-CccEEEecCccccccCCcceEEE
Confidence 99999999999987654221 1111 36999999999999999999874
No 49
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.69 E-value=1.7e-15 Score=151.24 Aligned_cols=163 Identities=13% Similarity=0.071 Sum_probs=129.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.+..+.+++++|.+. ..+++||+++|..++.+... ++.
T Consensus 54 ~~~~e~lA~~~g~~~-----------------------~~i~~g~~~a~~~~~~~l~~-------------------~gd 91 (370)
T TIGR02539 54 HDFLEDLAEFLGMDE-----------------------ARVTHGAREGKFAVMHALCK-------------------EGD 91 (370)
T ss_pred HHHHHHHHHHhCCCc-----------------------eEEECChHHHHHHHHHHhhC-------------------CCC
Confidence 566777999999872 57899999999887765432 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
.|+++...|+|...++++.+.+++.+|.+ +++.+|+++|+++|++.... +..+.+|+.+.+++++|.+.|+++|+++
T Consensus 92 ~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~l 171 (370)
T TIGR02539 92 WVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKV 171 (370)
T ss_pred EEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHH
Confidence 78899999999998888889999999986 45889999999999753321 1235678888899999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
|+++|++++||+||+.+.+.. .... ..+|.++.++|||++.+.++|++
T Consensus 172 a~~~~~~livDea~~~g~~~~-~~~~-----~~~di~v~s~sK~~~~~g~~G~l 219 (370)
T TIGR02539 172 CREKGVPLLLNCAYTVGRMPV-SAKE-----IGADFIVGSGHKSMAASGPCGVL 219 (370)
T ss_pred HHHcCCeEEEECccccCCcCC-CHHH-----cCCCEEEeeCcccccCCCCEEEE
Confidence 999999999999999874221 1111 13699999999999876767765
No 50
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.68 E-value=9.1e-16 Score=155.57 Aligned_cols=164 Identities=12% Similarity=0.021 Sum_probs=127.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++++.+++++|.+ ++...+||+|+|+++...+....... ..++.
T Consensus 79 ~~~r~~la~~~~~~--------------------~~~~v~~t~g~t~al~~i~~~~~~~~---------------~~~gd 123 (424)
T PLN02855 79 ELARKKVAAFINAS--------------------TSREIVFTRNATEAINLVAYTWGLAN---------------LKPGD 123 (424)
T ss_pred HHHHHHHHHHcCCC--------------------CCCEEEEeCCHHHHHHHHHHHhhhhc---------------CCCcC
Confidence 67889999999986 23468999999999776654321000 01345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++..+|.|...+. +..|.+++.||++.++.+|+++|+++|++. +.+|+.+..++.+|.+.|+++|++
T Consensus 124 ~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~I~~ 197 (424)
T PLN02855 124 EVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEK------TKLVATHHVSNVLGSILPVEDIVH 197 (424)
T ss_pred EEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccC------ceEEEEeCccccccccCCHHHHHH
Confidence 7899999998865543 345789999999877889999999999653 458889999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+|+++|++++||++|+.+....+ +... .+|.+++++||+ +.|.|+|++|
T Consensus 198 l~~~~g~~vivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~-~gp~G~G~l~ 246 (424)
T PLN02855 198 WAHAVGAKVLVDACQSVPHMPVD-----VQTL-GADFLVASSHKM-CGPTGIGFLW 246 (424)
T ss_pred HHHHcCCEEEEEhhhhcCCcCCC-----chhc-CCCEEEeecccc-cCCCccEEEE
Confidence 99999999999999987653221 1111 369999999995 6699999875
No 51
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.68 E-value=9.8e-16 Score=154.68 Aligned_cols=169 Identities=14% Similarity=0.006 Sum_probs=131.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
.++.+++.+++++++|.+ .....+++++||.++..++....+
T Consensus 41 ~~~~~~~~~~l~~~~g~~--------------------~~~~vi~~~~gt~a~~~a~~~~~~------------------ 82 (401)
T PLN02409 41 PALTKELLEDVKYIFKTK--------------------SGTPFIFPTTGTGAWESALTNTLS------------------ 82 (401)
T ss_pred HHHHHHHHHHHHHHhCCC--------------------CCCEEEEeCCcHHHHHHHHHhcCC------------------
Confidence 445589999999999987 223578999999988776654211
Q ss_pred cCceEEEecCCCchHHH--HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 240 NSRLVAYCSDQAHSSVE--KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~--kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
++..|++++..|++.. ..++..|.+++.|+.+.++.+|+++|++++++++. ..+.+|+.+..+|.||.+-|+++|
T Consensus 83 -~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~--~~~k~v~~~~~~~~tG~~~~~~~i 159 (401)
T PLN02409 83 -PGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTN--HKIKAVCVVHNETSTGVTNDLAGV 159 (401)
T ss_pred -CCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcC--CCccEEEEEeecccccccCCHHHH
Confidence 3456888888997764 44555678999999876667999999999986421 125588889999999999999999
Q ss_pred HHH--HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 318 GPI--CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 318 ~~i--a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++ |+++|++++||++++.+..... +..+ .+|.+++++|||++.|.|+|++|
T Consensus 160 ~~l~~~~~~g~~~vvD~v~s~g~~~id-----~~~~-~~D~~~~s~~K~l~~P~G~G~l~ 213 (401)
T PLN02409 160 RKLLDCAQHPALLLVDGVSSIGALDFR-----MDEW-GVDVALTGSQKALSLPTGLGIVC 213 (401)
T ss_pred HHHHhhhccCcEEEEEcccccCCcccc-----cccc-CccEEEEcCccccCcCCCcceeE
Confidence 999 9999999999999987654211 1111 36999999999999999999885
No 52
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.66 E-value=2.1e-15 Score=163.73 Aligned_cols=178 Identities=12% Similarity=0.040 Sum_probs=140.4
Q ss_pred hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC-ChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596 156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT-TASESTLICLLAGRTEAIRKYQQSHPEL 234 (375)
Q Consensus 156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts-GGT~Anl~AL~aar~~~~~~~~~~~~~~ 234 (375)
-.|+.++-.+..+|+++++|++. ..+.. +|+++++.++++.|.+...+ +
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~-----------------------~Sl~p~sGA~gE~A~Lmair~yh~~~-G------ 587 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDA-----------------------ICMQPNSGAQGEYAGLLAIRRYHRSR-G------ 587 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCe-----------------------EeecCCchHHHHHHHHHHHHHHHHhc-C------
Confidence 45777777888899999999982 24555 78899999999888654321 1
Q ss_pred hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596 235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL 314 (375)
Q Consensus 235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl 314 (375)
...+.+|+++..+|.+....+...|.+++.||+|++|.+|+++|++.|++... ...+|+.|.+++..+..+|+
T Consensus 588 ----e~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~---~laaVmiT~Pnt~Gv~e~~V 660 (954)
T PRK12566 588 ----QSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGD---RLSCLMITYPSTHGVYEEGI 660 (954)
T ss_pred ----CCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCC---CEEEEEEEecCcCceecchH
Confidence 11345899999999888777778899999999999999999999999974221 25688899998888777899
Q ss_pred HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++|+++|+++|..++||||+..+....... +--.||.+++++|||+++|.|.|..|
T Consensus 661 ~eI~~iah~~Galv~vDgA~~~a~~~l~~P-----g~~GADi~~~s~HKtf~~P~G~GGP~ 716 (954)
T PRK12566 661 REICEVVHQHGGQVYMDGANLNAQVGLARP-----ADIGADVSHMNLHKTFCIPHGGGGPG 716 (954)
T ss_pred HHHHHHHHHcCCEEEEEeeChhhccCCCCh-----hhcCCCEEEecCCcccCcCccCCCCc
Confidence 999999999999999999997543322111 11257999999999999999999764
No 53
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.66 E-value=5.2e-15 Score=144.90 Aligned_cols=166 Identities=11% Similarity=0.006 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
.+.+.+.+++++|.+. +....++++|||+++..++...... ++
T Consensus 33 ~~~~~~~la~~~~~~~-------------------~~~~i~~~~~gt~~l~~~~~~~~~~------------------~~ 75 (355)
T TIGR03301 33 TDQVRDRLLALAGGDD-------------------NHTCVLLQGSGTFAVEATIGSLVPR------------------DG 75 (355)
T ss_pred HHHHHHHHHHHhcCCC-------------------CCcEEEEeCCcHHHHHHHHHhccCC------------------CC
Confidence 3788999999999982 2235678999999998887664321 12
Q ss_pred eEEEecCCCchH-HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596 243 LVAYCSDQAHSS-VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321 (375)
Q Consensus 243 ~vV~~S~~aH~S-v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia 321 (375)
.+++++...+.+ +..++...|.+++.|+.++++.+|+++|++++++.. ...+|+.+...|.+|.+.|+++|+++|
T Consensus 76 ~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~~~~G~~~~~~~i~~l~ 151 (355)
T TIGR03301 76 KLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADP----DITHVATVHHETTTGILNPLEAIAKVA 151 (355)
T ss_pred eEEEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCC----CceEEEEEecCCcccchhHHHHHHHHH
Confidence 245555555544 445566678889999988788999999999997532 244677788889999999999999999
Q ss_pred HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++++++++||++++.+.... .+. .. .+|.+..++|||++.|.|+|+++
T Consensus 152 ~~~~~~livD~~~s~g~~~~-~~~----~~-~~d~~~~s~~K~l~~~~G~g~~~ 199 (355)
T TIGR03301 152 RSHGAVLIVDAMSSFGAIPI-DIE----EL-DVDALIASANKCLEGVPGFGFVI 199 (355)
T ss_pred HHcCCEEEEEeccccCCccc-chh----hc-CccEEEecCCcccccCCceeEEE
Confidence 99999999999887664321 111 11 36999999999998898988764
No 54
>PLN02721 threonine aldolase
Probab=99.65 E-value=2.5e-15 Score=147.40 Aligned_cols=166 Identities=17% Similarity=0.168 Sum_probs=119.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ .++++++||++++.++.+.... ++.
T Consensus 43 ~~l~~~la~~~~~~-----------------------~~~~~~~Gs~a~~~~l~~~~~~------------------~gd 81 (353)
T PLN02721 43 LRLEEEMAKIFGKE-----------------------AALFVPSGTMGNLISVLVHCDV------------------RGS 81 (353)
T ss_pred HHHHHHHHHHhCCc-----------------------eeEEecCccHHHHHHHHHHccC------------------CCC
Confidence 56777788888866 2689999999998777664320 245
Q ss_pred EEEecCCCchHHHHH---HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcC-CccEEEEEEc-CCCCcccc---ccHH
Q psy1596 244 VAYCSDQAHSSVEKA---GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKH-LIPFFVCGTL-GTTGACAF---DNLE 315 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka---a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g-~~p~~Vv~t~-GtT~tGav---Dpl~ 315 (375)
.|++++.+|+++.+. +...|.+++.+|.++++.+|+++|+++|++....+ ..+.+|+.+. .++++|.+ ++++
T Consensus 82 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~ 161 (353)
T PLN02721 82 EVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTD 161 (353)
T ss_pred eEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHH
Confidence 788999999988873 45678899999988889999999999997532211 1244555544 45567765 4589
Q ss_pred HHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596 316 ELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC 371 (375)
Q Consensus 316 eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~ 371 (375)
+|+++|+++|+|+|+|+||..+........ ....++.+|++++++|||+..|.|+
T Consensus 162 ~l~~l~~~~g~~livD~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~sK~l~~~~G~ 216 (353)
T PLN02721 162 KVGELAKRHGLKLHIDGARIFNASVALGVP-VHRLVKAADSVSVCLSKGLGAPVGS 216 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhhcchhhhCCC-HHHHhhhCCEEEEecccccCCceee
Confidence 999999999999999999865432111111 1111245799999999999988664
No 55
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.65 E-value=1.1e-15 Score=149.19 Aligned_cols=162 Identities=19% Similarity=0.225 Sum_probs=118.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+++++++| + ...++++|||+++..++.+... ++.
T Consensus 35 ~~l~~~~a~~~g-~----------------------~~~~~~~~gt~a~~~~~~~l~~-------------------~gd 72 (338)
T cd06502 35 AKLEARAAELFG-K----------------------EAALFVPSGTAANQLALAAHTQ-------------------PGG 72 (338)
T ss_pred HHHHHHHHHHhC-C----------------------CeEEEecCchHHHHHHHHHhcC-------------------CCC
Confidence 788899999999 5 2479999999998887765432 245
Q ss_pred EEEecCCCchHHHHH---HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcC-CccEEEEEEcCCCCcc--ccccHHHH
Q psy1596 244 VAYCSDQAHSSVEKA---GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKH-LIPFFVCGTLGTTGAC--AFDNLEEL 317 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka---a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g-~~p~~Vv~t~GtT~tG--avDpl~eI 317 (375)
.|++++.+|.++.++ +.+.|.+++.+|.+. +.+|+++|++++++..+.+ ..+.+|+.+.+++..| ..+++++|
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i 151 (338)
T cd06502 73 SVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAI 151 (338)
T ss_pred eEEEecCcceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHH
Confidence 788999999987653 356788999999865 7899999999997532111 1355677777766433 35889999
Q ss_pred HHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVHFDC 371 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P~~~ 371 (375)
+++|+++|+++|+|+||..+..... ...... ..+|.++.++|||++.|.|+
T Consensus 152 ~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g~ 204 (338)
T cd06502 152 SALAKENGLPLHLDGARLANAAAALGVALKTYK---SGVDSVSFCLSKGGGAPVGA 204 (338)
T ss_pred HHHHHHcCCeEeechHHHHHHHHhcCCCHHHHH---hcCCEEEEeccccCCCccce
Confidence 9999999999999999854322111 111111 35799999999999988654
No 56
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.65 E-value=4.6e-15 Score=148.44 Aligned_cols=167 Identities=14% Similarity=0.125 Sum_probs=126.3
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
+..++.+++++.+++++|.+. ...++++|+|+++...+.+.....
T Consensus 57 ~~~~~~~~l~~~ia~~~~~~~---------------------~~v~~~~~~t~~l~~~~~~~~~~~-------------- 101 (397)
T TIGR01976 57 RADQVVDDAREAVADLLNADP---------------------PEVVFGANATSLTFLLSRAISRRW-------------- 101 (397)
T ss_pred HHHHHHHHHHHHHHHHcCCCC---------------------CeEEEeCCHHHHHHHHHHHHHhcC--------------
Confidence 334555789999999999872 247899999998765554432110
Q ss_pred hhcCceEEEecCCCchHHHHH----HHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 238 EINSRLVAYCSDQAHSSVEKA----GLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 238 ~~~~~~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
.++..|++++..|.|.... ++..|.+++.++.++ ++.+|+++|+++|+++ +.+|+.+.+++.+|.+.
T Consensus 102 --~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~------~~lv~i~~~~n~tG~~~ 173 (397)
T TIGR01976 102 --GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPR------TRLVAVTAASNTLGSIV 173 (397)
T ss_pred --CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCC------ceEEEEeCCCCCCCccC
Confidence 1345788999999887644 345788999999875 7899999999998643 44888999999999999
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++|+++|+++|++++||+|++.+.... .... . .+|.+++++|||++.+ +|+++
T Consensus 174 ~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-~~~~--~---~~d~~~~s~~K~~g~~--~G~l~ 228 (397)
T TIGR01976 174 DLAAITELVHAAGALVVVDAVHYAPHGLI-DVQA--T---GADFLTCSAYKFFGPH--MGILW 228 (397)
T ss_pred CHHHHHHHHHHcCCEEEEehhhhccccCC-CHHH--c---CCCEEEEechhhcCCc--eEEEE
Confidence 99999999999999999999997654321 1111 1 3699999999998643 67653
No 57
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.62 E-value=4.1e-15 Score=152.60 Aligned_cols=165 Identities=13% Similarity=0.045 Sum_probs=120.9
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe---CChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ---TTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft---sGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
...+|+.+++.++++||.+. ..-+++ +|||++|+.++.+...
T Consensus 78 ~~~iE~~ar~~~a~lf~a~~---------------------~~~~~~~~~~sgt~an~~v~~al~~-------------- 122 (452)
T PTZ00094 78 VDKIENLCQKRALEAFGLDP---------------------EEWGVNVQPYSGSPANFAVYTALLQ-------------- 122 (452)
T ss_pred HHHHHHHHHHHHHHHhCCCc---------------------ccceeecCCCchHHHHHHHHHHhcC--------------
Confidence 46666678889999999872 112355 8999999998876521
Q ss_pred hhhhcCceEEEecCCCchHHHHHHH-Hc-------C--CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGL-IG-------L--VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT 305 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~-lg-------~--~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt 305 (375)
++..|++++..|.+....+. +. + .++..++++.+|.+|+++|++++++.+ |.+|+++ .
T Consensus 123 -----~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~-----~~lvi~~--~ 190 (452)
T PTZ00094 123 -----PHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFR-----PKLIIAG--A 190 (452)
T ss_pred -----CCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhC-----CCEEEEe--C
Confidence 24578899999988765431 11 1 234456677789999999999997532 3344433 4
Q ss_pred CCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 306 TGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 306 T~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+.+|.+.|+++|+++|+++|+++|||+||+.+.+...-.. ..+..+|.+++++|||++.|.|.++
T Consensus 191 s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~---~~~~~~D~l~~S~hK~l~GP~Gg~l 255 (452)
T PTZ00094 191 SAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP---SPFPYADVVTTTTHKSLRGPRSGLI 255 (452)
T ss_pred CCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC---CCCCCCcEEEcCCccCCCCCCceEE
Confidence 5799999999999999999999999999999976432111 1234689999999999999998443
No 58
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.60 E-value=2.4e-14 Score=142.97 Aligned_cols=173 Identities=14% Similarity=0.057 Sum_probs=119.7
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
...+.+++.+++++++|.+ ..++|+|+|+|+..++.+..... .+.... ... ..
T Consensus 43 ~~~~~~~~~~~~a~~~g~~-----------------------~~~~~~g~t~al~~al~al~~~G-d~~~~~--~~~-~s 95 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVE-----------------------DAVIVSSASAGIAQSVAAVITRG-NRYLVE--NLH-DS 95 (363)
T ss_pred HHHHHHHHHHHHHHhhCCC-----------------------eEEEEcCHHHHHHHHHHHHhcCC-Ccchhh--ccc-cc
Confidence 4455688999999999875 36999999999999998764310 000000 000 00
Q ss_pred hcCceEEEecCCCchHH-----HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 239 INSRLVAYCSDQAHSSV-----EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 239 ~~~~~vV~~S~~aH~Sv-----~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
..++..|+++. .|+.. ..++.+.|.+++.++. ++.+|+++|+++|.+.++ .+++++...+.+|.+-|
T Consensus 96 ~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~~~t~-----ai~~v~~~~~~~g~~~~ 167 (363)
T TIGR01437 96 KIEVNEVVLPK-GHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAITEKTA-----AILYIKSHHCVQKSMLS 167 (363)
T ss_pred ccccceEEEEC-ccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcChhce-----EEEEEecCCCCcCCcCC
Confidence 11223566765 55443 3445678888888876 456999999999986543 23445666778999999
Q ss_pred HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|+++|+++|+++|+|+||+... +... .+ .+|.+++++|||+..|. .|+++
T Consensus 168 ~~~i~~~a~~~gi~vivD~a~~~~~------~~~~-~~-g~D~~~~S~~K~l~gp~-~G~l~ 220 (363)
T TIGR01437 168 VEDAAQVAQEHNLPLIVDAAAEEDL------QKYY-RL-GADLVIYSGAKAIEGPT-SGLVL 220 (363)
T ss_pred HHHHHHHHHHcCCeEEEECCCCCch------HHHH-Hc-CCCEEEEeCCcccCCCc-eEEEE
Confidence 9999999999999999999997321 1101 11 36999999999999997 67653
No 59
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.60 E-value=3.3e-14 Score=141.04 Aligned_cols=165 Identities=10% Similarity=0.022 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
..++.+.+++++|.+. +....++|++||+++..++.+... ++
T Consensus 39 ~~~~~~~l~~l~~~~~-------------------~~~~i~~~~~gt~~l~~~~~~l~~-------------------~~ 80 (368)
T PRK13479 39 TASVRAKLVAIATGEE-------------------GYTCVPLQGSGTFSVEAAIGSLVP-------------------RD 80 (368)
T ss_pred HHHHHHHHHHHhCCCC-------------------CceEEEEcCCcHHHHHHHHHhccC-------------------CC
Confidence 4789999999999862 223467899999998888776532 12
Q ss_pred eEEEecCCCchHH--HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 243 LVAYCSDQAHSSV--EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 243 ~vV~~S~~aH~Sv--~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
..+++....++.. .+.+...|.+++.||.++++.+|+++|++++++..+ +.+|..+..+|.+|.+.|+++|+++
T Consensus 81 ~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~~~~i~~l 156 (368)
T PRK13479 81 GKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPR----ITHVALVHCETTTGILNPLDEIAAV 156 (368)
T ss_pred CeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCC----CcEEEEEcccCccccccCHHHHHHH
Confidence 2444544555544 355666788999999987788999999999875321 3367788899999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
|+++|++++||++++.+.... . +... .+|.++.++|||++.|.|+|+++
T Consensus 157 ~~~~~~~livDa~~~~g~~~~---~--~~~~-~~d~~v~s~~K~l~g~~G~G~l~ 205 (368)
T PRK13479 157 AKRHGKRLIVDAMSSFGAIPI---D--IAEL-GIDALISSANKCIEGVPGFGFVI 205 (368)
T ss_pred HHHcCCEEEEEcccccCCccc---c--cccc-CceEEEecCccccccCCCceEEE
Confidence 999999999998887664321 1 1111 46999999999999999999874
No 60
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.58 E-value=2.5e-14 Score=144.38 Aligned_cols=148 Identities=13% Similarity=0.025 Sum_probs=111.7
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH----HHcCCeE----EEEec
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG----LIGLVKM----RYIES 271 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa----~lg~~~v----~~Vp~ 271 (375)
...+||+|+|+++..++...... . .++.+|+++..+|.|+..++ +..|.++ +.++.
T Consensus 87 ~~v~~~~~~t~~l~~~~~~~~~~-------~---------~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (406)
T TIGR01814 87 DEVVVMNTLTINLHLLLASFYKP-------T---------PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP 150 (406)
T ss_pred CcEEEeCCchHHHHHHHHHhcCC-------c---------CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc
Confidence 35799999999987776543110 0 01236889999999976654 3345565 56777
Q ss_pred CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC
Q psy1596 272 DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV 351 (375)
Q Consensus 272 d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi 351 (375)
+++|.+|+++++++++... ..+.+|+++..++.+|.+.|+++|+++|+++|++++||++++++.+... +...
T Consensus 151 ~~~g~~~~~~l~~~~~~~~---~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id-----~~~~ 222 (406)
T TIGR01814 151 REEETLRLEDILDTIEKNG---DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLD-----LHDW 222 (406)
T ss_pred CCCCccCHHHHHHHHHhcC---CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccc-----cccC
Confidence 7778999999999986432 1255888999999999999999999999999999999999999876321 1111
Q ss_pred CcccEEEEcCcccCCCCCcce
Q psy1596 352 EYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 352 e~aDSi~~d~HK~l~~P~~~g 372 (375)
.+|.+++++||||+.|.|+|
T Consensus 223 -gvD~~~~s~hK~l~g~pG~~ 242 (406)
T TIGR01814 223 -GVDFACWCTYKYLNAGPGAG 242 (406)
T ss_pred -CCCEEEEcCccccCCCCCeE
Confidence 46999999999998777843
No 61
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.58 E-value=9.6e-14 Score=134.54 Aligned_cols=175 Identities=15% Similarity=0.049 Sum_probs=128.9
Q ss_pred hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
..+..++++.+.+++...+|.+. .....++++|||+++..++.+...
T Consensus 35 ~~~~~~l~~~l~~~l~~~~~~~~-------------------~~~~~~~~~~~t~a~~~~~~~~~~-------------- 81 (350)
T cd00609 35 DPGLPELREAIAEWLGRRGGVDV-------------------PPEEIVVTNGAQEALSLLLRALLN-------------- 81 (350)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCC-------------------CcceEEEecCcHHHHHHHHHHhCC--------------
Confidence 35677788888888888887652 334688999999998887766532
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH--HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG--DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~--e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
++..|+++..+|.++..+++..+.+++.|+.++++.++. +.+++.+.. .+.+|+++.+++++|.+.|
T Consensus 82 -----~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~ 150 (350)
T cd00609 82 -----PGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLS 150 (350)
T ss_pred -----CCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccC
Confidence 235799999999999999988889999999988887776 555544322 2557888889999999987
Q ss_pred HHHH---HHHHHhcCCEEEEecccccCcccchhhhh-hhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596 314 LEEL---GPICEKEGLWLHVDAAYAGSSFICPEFRK-WLAGVEYANSIAFNPSKWLM-VHFDCTAM 374 (375)
Q Consensus 314 l~eI---~~ia~~~~iwlHVDaA~gg~~~~~~~~~~-~~~gie~aDSi~~d~HK~l~-~P~~~g~l 374 (375)
++++ .++|+++|+|+|+|+||+++......... ...+...+|.+..++||+++ .+.++|++
T Consensus 151 ~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i 216 (350)
T cd00609 151 EEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYL 216 (350)
T ss_pred HHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEE
Confidence 6555 48999999999999999886542211100 01122246888999999988 45566765
No 62
>KOG1368|consensus
Probab=99.58 E-value=7.3e-15 Score=139.77 Aligned_cols=177 Identities=16% Similarity=0.171 Sum_probs=130.4
Q ss_pred ccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHH
Q psy1596 144 VVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEA 223 (375)
Q Consensus 144 ~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~ 223 (375)
+...-|..|+.+ .++...+++++|-+ .|+|+++||++|++|++..+.+
T Consensus 47 vgDdVyGeD~tt--------~rLE~~vA~l~GKE-----------------------AgLFv~SGTmgNllaIm~Hc~~- 94 (384)
T KOG1368|consen 47 VGDDVYGEDPTT--------NRLEQRVAELFGKE-----------------------AGLFVPSGTMGNLLAIMVHCHQ- 94 (384)
T ss_pred cCcccccCCccH--------HHHHHHHHHHhCcc-----------------------ceeeecccccccHHHHHHHhcC-
Confidence 344456667776 77788889998866 4899999999999999988763
Q ss_pred HHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH---HHcCCeEEEEecCCCCCcCHHHHHHHHHHhh-hcCCccEEE
Q psy1596 224 IRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG---LIGLVKMRYIESDDKLSLRGDKLIEAIERDK-KKHLIPFFV 299 (375)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa---~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~-~~g~~p~~V 299 (375)
++-.|++.+.+|.-..++. .++++.+++|...++|.||++++|++|.... .-..+|.-+
T Consensus 95 -----------------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~L 157 (384)
T KOG1368|consen 95 -----------------RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKL 157 (384)
T ss_pred -----------------CCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceE
Confidence 3447999999996665542 5789999999999999999999999998433 223344434
Q ss_pred EEEcCCC-Ccc-ccccH---HHHHHHHHhcCCEEEEecccccCccc---chhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596 300 CGTLGTT-GAC-AFDNL---EELGPICEKEGLWLHVDAAYAGSSFI---CPEFRKWLAGVEYANSIAFNPSKWLMVHFDC 371 (375)
Q Consensus 300 v~t~GtT-~tG-avDpl---~eI~~ia~~~~iwlHVDaA~gg~~~~---~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~ 371 (375)
++.-.|- .+| .+-|| ++|.++|+++|+.||+|||.-+.+.. +| .+.. .+.+||+++.+.|.|++|.|+
T Consensus 158 IclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~-vk~i---~~~fDSVsiCLSKglgAPVGS 233 (384)
T KOG1368|consen 158 ICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVP-VKKI---CSAFDSVSICLSKGLGAPVGS 233 (384)
T ss_pred EEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCC-HHHH---HHhhhhhhhhhhccCCCCccc
Confidence 4333333 345 66554 55667899999999999997665532 22 1222 245799999999999999987
Q ss_pred ee
Q psy1596 372 TA 373 (375)
Q Consensus 372 g~ 373 (375)
=+
T Consensus 234 Vi 235 (384)
T KOG1368|consen 234 VI 235 (384)
T ss_pred EE
Confidence 43
No 63
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.57 E-value=9.8e-14 Score=138.68 Aligned_cols=194 Identities=11% Similarity=-0.037 Sum_probs=134.3
Q ss_pred chhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC
Q psy1596 127 FQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT 206 (375)
Q Consensus 127 ~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts 206 (375)
.+++.....+.+.+... .+ +.+....|+..+..++.+.+++++|.+ ..++++
T Consensus 54 ~~~v~~~~~~~~~~~~~----~~-~~s~~~~G~~~~~~~le~~ia~~~g~~-----------------------~~ii~~ 105 (393)
T TIGR01822 54 HPDLIQAAKDALDEHGF----GM-SSVRFICGTQDIHKELEAKIAAFLGTE-----------------------DTILYA 105 (393)
T ss_pred CHHHHHHHHHHHHHhCC----CC-CCcCcccCChHHHHHHHHHHHHHhCCC-----------------------cEEEEC
Confidence 44555555555554211 12 223444576666688889999999875 268889
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHH
Q psy1596 207 TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAI 286 (375)
Q Consensus 207 GGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI 286 (375)
||++||..++.+..+ ++..|++++.+|.|+..++++.+.+.+.++ .+|+++|+++|
T Consensus 106 ~~~~a~~~~~~~l~~-------------------~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i 161 (393)
T TIGR01822 106 SCFDANGGLFETLLG-------------------AEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQL 161 (393)
T ss_pred chHHHHHHHHHHhCC-------------------CCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHH
Confidence 999998866544311 345799999999999998877665554443 37999999999
Q ss_pred HHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcCcc
Q psy1596 287 ERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNPSK 363 (375)
Q Consensus 287 ~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~HK 363 (375)
++....+..+.+|+.....+++|.+.|+++|+++|++||+||++|++|+.+.... ..+. ...++ ..+|.++.++||
T Consensus 162 ~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~-~~~~~~~~~~~~~~~di~~~s~sK 240 (393)
T TIGR01822 162 KEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGP-TGRGSHELCGVMGRVDIITGTLGK 240 (393)
T ss_pred HhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCC-CCCchHHhcCCCCCCeEEEEEChH
Confidence 8754333345577777677899999999999999999999999999997654311 1000 01222 257999999999
Q ss_pred cCCCCCcceee
Q psy1596 364 WLMVHFDCTAM 374 (375)
Q Consensus 364 ~l~~P~~~g~l 374 (375)
++..+ ..|++
T Consensus 241 ~l~g~-r~G~~ 250 (393)
T TIGR01822 241 ALGGA-SGGFT 250 (393)
T ss_pred HhhCC-CcEEE
Confidence 98654 34654
No 64
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.57 E-value=1.9e-13 Score=133.68 Aligned_cols=187 Identities=13% Similarity=0.034 Sum_probs=132.6
Q ss_pred hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596 128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT 207 (375)
Q Consensus 128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG 207 (375)
+++...+.+.+.+.+. ..++.....|.....+++.+++++++|.+ ..+++++
T Consensus 18 ~~v~~a~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----------------------~~iv~~s 69 (349)
T cd06454 18 PEVIEAAKEALDKYGV-----GAGGSRLISGTSDLHEELEEELAEFHGKE-----------------------AALVFSS 69 (349)
T ss_pred HHHHHHHHHHHHHhCC-----CCCCcCeecCCchHHHHHHHHHHHHhCCC-----------------------CEEEecc
Confidence 5666666666654211 11222233355556688899999999876 2478888
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596 208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE 287 (375)
Q Consensus 208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~ 287 (375)
||++|+.++.+... ++..|++++..|.++..++...+.+++.++. +|++.|+++|+
T Consensus 70 g~~a~~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~ 125 (349)
T cd06454 70 GYAANDGVLSTLAG-------------------KGDLIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLR 125 (349)
T ss_pred HHHHHHHHHHHhcC-------------------CCCEEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHH
Confidence 89999877654432 2457889999999999888777778877763 58899999997
Q ss_pred HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhc-CCCcccEEEEcCccc
Q psy1596 288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLA-GVEYANSIAFNPSKW 364 (375)
Q Consensus 288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~-gie~aDSi~~d~HK~ 364 (375)
+.. +...+.+|+.+..++.+|.+.|+++|+++|+++|+++++|++|+.+.+. +.... ... ....+|.++.++||+
T Consensus 126 ~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~ 203 (349)
T cd06454 126 EAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYG-PHGRGVEEFGGLTDDVDIIMGTLGKA 203 (349)
T ss_pred Hhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccC-CCCCChhhhccccccCcEEEeechhh
Confidence 643 1224667888888899999999999999999999999999999865431 11000 011 123579999999999
Q ss_pred CCCC
Q psy1596 365 LMVH 368 (375)
Q Consensus 365 l~~P 368 (375)
++.+
T Consensus 204 ~~~~ 207 (349)
T cd06454 204 FGAV 207 (349)
T ss_pred hccc
Confidence 8764
No 65
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.57 E-value=1e-14 Score=147.33 Aligned_cols=166 Identities=19% Similarity=0.158 Sum_probs=123.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.+..+.++++||.+ ++ -++|.|.|.+|..+++++.. ++.
T Consensus 69 ~eAe~~aA~~fGAd---------~t-------------~flvnGsT~g~~a~i~a~~~-------------------~gd 107 (417)
T PF01276_consen 69 KEAEELAARAFGAD---------KT-------------FFLVNGSTSGNQAMIMALCR-------------------PGD 107 (417)
T ss_dssp HHHHHHHHHHHTES---------EE-------------EEESSHHHHHHHHHHHHHTT-------------------TTC
T ss_pred HHHHHHHHHhcCCC---------eE-------------EEEecCchHHHHHHHHHhcC-------------------CCC
Confidence 78899999999988 21 24556666778888777643 456
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCC-----CCcCH-----HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-----LSLRG-----DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-----g~md~-----e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
.|+++..+|-|+..|+.+.+..++.|+..++ +.+++ +.|+++|++...... |.+|++|.+ |..|.+-|
T Consensus 108 ~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~-~~~vvlt~P-TY~Gv~~d 185 (417)
T PF01276_consen 108 KVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKA-PRLVVLTSP-TYYGVCYD 185 (417)
T ss_dssp EEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHC-ESEEEEESS--TTSEEE-
T ss_pred EEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccC-ceEEEEeCC-CCCeEEEC
Confidence 8999999999999999999999998877421 24666 999999998654322 556888877 78899999
Q ss_pred HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCccc-------EEEEcCcccCCCCCcceee
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN-------SIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD-------Si~~d~HK~l~~P~~~g~l 374 (375)
+++|+++|+++++.|+||.|||+...|.+-++..+. -.|| .++-|.||.|..-..+++|
T Consensus 186 i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~l 251 (417)
T PF01276_consen 186 IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSML 251 (417)
T ss_dssp HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEE
T ss_pred HHHHHHHhcccCCEEEEEccccccccCCCCccchhh--ccCccccccceeeeechhhcccccccceEE
Confidence 999999999999999999999999888755443322 1478 9999999999988888776
No 66
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.56 E-value=1.1e-13 Score=135.71 Aligned_cols=152 Identities=13% Similarity=0.055 Sum_probs=116.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..++++|||+|+..++.+.+. .++.
T Consensus 21 ~~~~~~la~~~~~~-----------------------~~~~~~sgt~al~~~l~~l~~------------------~~gd 59 (352)
T cd00616 21 REFEKAFAEYLGVK-----------------------YAVAVSSGTAALHLALRALGI------------------GPGD 59 (352)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHcCC------------------CCCC
Confidence 77888999999865 368999999999888876521 1345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
.|+++..+|.++..++...|.+++.+++++ ++.+|+++|++++++. +.+|+.+ +.+|.+.|+++|.++|+
T Consensus 60 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~l~~ 130 (352)
T cd00616 60 EVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPR------TKAIIPV---HLYGNPADMDAIMAIAK 130 (352)
T ss_pred EEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcC------CeEEEEE---CCCCCcCCHHHHHHHHH
Confidence 799999999999999888888999999986 7899999999988532 3355555 46899999999999999
Q ss_pred hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEc--CcccCCCCCc
Q psy1596 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFN--PSKWLMVHFD 370 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d--~HK~l~~P~~ 370 (375)
++|+++++|+||+.+...... .+.. .+|..+++ .|||+..+.|
T Consensus 131 ~~~i~li~D~a~~~g~~~~~~---~~~~--~~d~~~~S~~~~K~~~~~~g 175 (352)
T cd00616 131 RHGLPVIEDAAQALGATYKGR---KVGT--FGDAGAFSFHPTKNLTTGEG 175 (352)
T ss_pred HcCCeEEEECCCCCCCeECCE---Eccc--CcceeEEcCCCCCCCcccCc
Confidence 999999999999877543211 1111 13555666 5599855443
No 67
>PRK07179 hypothetical protein; Provisional
Probab=99.56 E-value=1.6e-13 Score=138.51 Aligned_cols=158 Identities=14% Similarity=0.000 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
...++.+.|++++|.+ ..+||+||++||..++.+... +
T Consensus 100 ~~~~le~~la~~~g~~-----------------------~~~~~~sG~~An~~~l~~l~~-------------------~ 137 (407)
T PRK07179 100 PKPQFEKKLAAFTGFE-----------------------SCLLCQSGWAANVGLLQTIAD-------------------P 137 (407)
T ss_pred HHHHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHhCC-------------------C
Confidence 4467778999998876 258999999999888865432 2
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia 321 (375)
+..|+++...|.|+..++...+.+++.++. .|+++|+++|++. .+.+|++...++++|.+.|+++|.++|
T Consensus 138 g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~pl~~I~~l~ 207 (407)
T PRK07179 138 NTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAPLADIVDIA 207 (407)
T ss_pred CCEEEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHhc-----CCeEEEECCCCCCCCccccHHHHHHHH
Confidence 346888999999999888777776655543 5999999999652 144777777889999999999999999
Q ss_pred HhcCCEEEEecccccCcccchhhhhh--hcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596 322 EKEGLWLHVDAAYAGSSFICPEFRKW--LAGV-EYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 322 ~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gi-e~aDSi~~d~HK~l~~P~~~g~l 374 (375)
+++|+++|+|++|+.+..- +.-+.. ..++ +.+|.++.++||+++.+ +|++
T Consensus 208 ~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~--~G~l 260 (407)
T PRK07179 208 EEFGCVLVVDESHSLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAGR--AGII 260 (407)
T ss_pred HHcCCEEEEECcccccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhcc--CeEE
Confidence 9999999999999865321 110000 1123 35799999999998754 5554
No 68
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.55 E-value=3.2e-14 Score=155.56 Aligned_cols=170 Identities=12% Similarity=-0.078 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
-+++++.++++||.+. +.-..+||+|+|+|+.+....... .++
T Consensus 80 ~e~aR~~ia~~lga~~-------------------~~~~VvFtsnaT~alnlva~~l~~------------------~~g 122 (805)
T PLN02724 80 IESARQQVLEYFNAPP-------------------SDYACVFTSGATAALKLVGETFPW------------------SSE 122 (805)
T ss_pred HHHHHHHHHHHhCCCc-------------------cceEEEEeCChHHHHHHHHHHCCC------------------CCC
Confidence 3788999999999862 112579999999997655432210 123
Q ss_pred eEEEecCCCchHHHHHHHH---cCCeEEEEecC--------CCCCcCH--HHHHHHHHH----hhhcCCccEEEEEEcCC
Q psy1596 243 LVAYCSDQAHSSVEKAGLI---GLVKMRYIESD--------DKLSLRG--DKLIEAIER----DKKKHLIPFFVCGTLGT 305 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d--------~~g~md~--e~Le~aI~~----~~~~g~~p~~Vv~t~Gt 305 (375)
..|+++...|.|+.....+ .|.+++.++++ +.+.++. ++|++.++. ....+..+.+|++++.+
T Consensus 123 d~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vs 202 (805)
T PLN02724 123 SHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSEC 202 (805)
T ss_pred CeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccc
Confidence 4688899999998855433 46788888876 4555654 667776531 11112234589999999
Q ss_pred CCccccccHHHHHHHHHhc-------C-CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 306 TGACAFDNLEELGPICEKE-------G-LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 306 T~tGavDpl~eI~~ia~~~-------~-iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+.+|.+.|+++|..+++.. + ++++||||++.+..... .+ .+ .+|.+++++|||++.|.|+|+||
T Consensus 203 N~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piD-v~----~~-~~Dfl~~S~HK~~GgP~G~G~L~ 274 (805)
T PLN02724 203 NFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPD-LS----RY-PADFVVVSFYKIFGYPTGLGALL 274 (805)
T ss_pred cCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCC-hh----hc-CCCEEEEecceeccCCCCceEEE
Confidence 9999999999876655532 3 57999999999876432 11 12 47999999999999999999986
No 69
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.54 E-value=1.9e-13 Score=140.70 Aligned_cols=164 Identities=17% Similarity=0.130 Sum_probs=115.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ .+++|+|||+|+..++.+..+ ++.
T Consensus 81 ~~Lreaia~~~~~~-----------------------~vv~t~ggt~A~~~~~~all~-------------------pGD 118 (460)
T PRK13238 81 YRLEDAVKDIFGYP-----------------------YTIPTHQGRAAEQILFPVLIK-------------------KGD 118 (460)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEECCCHHHHHHHHHHHhCC-------------------CCC
Confidence 45566677777765 379999999999988765422 345
Q ss_pred EEEecCCCchHHHHH-HHHcCCeEEEEecCC--------C--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc-c-
Q psy1596 244 VAYCSDQAHSSVEKA-GLIGLVKMRYIESDD--------K--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC-A- 310 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~d~--------~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG-a- 310 (375)
|++++. |+....+ +.+.|.+++.+++++ . |.+|+++|+++|.+... ..+.+|+++.++|.+| .
T Consensus 119 -Vii~~p-~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG~v 194 (460)
T PRK13238 119 -VVPSNY-HFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNSAGGQP 194 (460)
T ss_pred -EEccCC-cccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCCCCCcC
Confidence 666655 5555554 578888999999853 2 44999999999975321 1255888899999987 3
Q ss_pred --cccHHHHHHHHHhcCCEEEEeccccc-Ccccch----hhhhh-hc-----CCCcccEEEEcCcccCCCCCcceee
Q psy1596 311 --FDNLEELGPICEKEGLWLHVDAAYAG-SSFICP----EFRKW-LA-----GVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 311 --vDpl~eI~~ia~~~~iwlHVDaA~gg-~~~~~~----~~~~~-~~-----gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
.+++++|+++|++||+++++|+|+.. ++.+.. .++.. +. -...+|++++++||.+++|.| |++
T Consensus 195 ~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i 270 (460)
T PRK13238 195 VSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLL 270 (460)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEE
Confidence 46789999999999999999998844 222221 11110 00 013589999999999999986 544
No 70
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.53 E-value=1.9e-13 Score=137.20 Aligned_cols=168 Identities=13% Similarity=0.069 Sum_probs=125.5
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++++.+|+.+.+|.+. ++...++|+|+++++..++.+...
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~--------------- 115 (391)
T PRK08361 70 AGIPELREAIAEYYKKFYGVDV-------------------DVDNVIVTAGAYEATYLAFESLLE--------------- 115 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCC-------------------CcccEEEeCChHHHHHHHHHHhcC---------------
Confidence 4667777888888888878653 345689999999998877765422
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN- 313 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp- 313 (375)
++..|++++.+|.++...+...|.+++.+|+++ ++.+|+++|++.+++. +.+|+.+.++|+||.+-+
T Consensus 116 ----~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~i~~p~NPtG~~~~~ 185 (391)
T PRK08361 116 ----EGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKR------TRMIVINYPNNPTGATLDK 185 (391)
T ss_pred ----CCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccc------cEEEEEeCCCCCCCcCcCH
Confidence 245788999999999988888888999999865 4579999999988753 336777889999999877
Q ss_pred --HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 314 --LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 314 --l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++|+++|+++++++++|++|+....-..............+.++.+++|.++.|
T Consensus 186 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~ 242 (391)
T PRK08361 186 EVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMT 242 (391)
T ss_pred HHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCc
Confidence 8999999999999999999997653211110011110112367889999987655
No 71
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.51 E-value=1.3e-12 Score=130.36 Aligned_cols=202 Identities=15% Similarity=0.044 Sum_probs=134.1
Q ss_pred CCchhhhhhHHHHhhhccccccc--ccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcE
Q psy1596 125 SPFQKVIGKLSSKIKSHNVVVTE--ADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFI 202 (375)
Q Consensus 125 ~~~~~~~~~~~~~~~~~n~~~~~--~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~G 202 (375)
..-+.+.++..+.+.+.....+. ...+.+..+.|...+.+++.+.+++++|.+ ..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-----------------------~~ 74 (370)
T PRK05937 18 SRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-----------------------EA 74 (370)
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-----------------------eE
Confidence 33355666666655553211121 233456667888888899999999999987 13
Q ss_pred EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHH
Q psy1596 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKL 282 (375)
Q Consensus 203 vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~L 282 (375)
++.++|+.+|+. +..+.. .++..|+++...|.|+..++.+.....+.++ ..|+++|
T Consensus 75 l~~~sG~~a~~~-~~~~~~------------------~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l 130 (370)
T PRK05937 75 FIVPSGYMANLG-LCAHLS------------------SVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHL 130 (370)
T ss_pred EEECChHHHHHH-HHHHhC------------------CCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHH
Confidence 666667778753 222110 1234788889999999999875433333343 4689999
Q ss_pred HHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcCCCcccEEEEc
Q psy1596 283 IEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAGVEYANSIAFN 360 (375)
Q Consensus 283 e~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gie~aDSi~~d 360 (375)
+++|++..+.+....+|+++..++++|.+.|+++|+++|+++|+++|||+||+.+.+-. ..+.. ..+....+.+..+
T Consensus 131 ~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~-~g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 131 ESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGD-DGKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCC-CCCchHHhhCCCCCcEEEEe
Confidence 99998653322234466677889999999999999999999999999999999764321 11110 1133333455677
Q ss_pred CcccCCCCCcceeeC
Q psy1596 361 PSKWLMVHFDCTAMW 375 (375)
Q Consensus 361 ~HK~l~~P~~~g~l~ 375 (375)
++|.+ .|.|+++++
T Consensus 210 lsK~~-g~~G~~vl~ 223 (370)
T PRK05937 210 YSKAL-GSMGAALLS 223 (370)
T ss_pred chhhh-hcCceEEEc
Confidence 88976 578888875
No 72
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.51 E-value=7e-13 Score=132.13 Aligned_cols=174 Identities=11% Similarity=-0.084 Sum_probs=123.5
Q ss_pred chhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCC
Q psy1596 153 SIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHP 232 (375)
Q Consensus 153 ~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~ 232 (375)
+....|...+++++.+++++++|.+ ..+++++|++++..++.+..
T Consensus 79 ~~~~~G~~~l~~~l~~~la~~~g~~-----------------------~~i~~tsG~~a~~~~~~~l~------------ 123 (397)
T PRK06939 79 VRFICGTQDLHKELEEKLAKFLGTE-----------------------DAILYSSCFDANGGLFETLL------------ 123 (397)
T ss_pred cccccCCcHHHHHHHHHHHHHhCCC-----------------------cEEEEcChHHHHHHHHHHhC------------
Confidence 3445677788899999999999865 13555666888877654431
Q ss_pred cchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 233 ELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 233 ~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
.++..|++++.+|.++..++.+.+.+++.++. +|+++|++.+++....+..+.+|+...-.+.+|.++
T Consensus 124 -------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~ 191 (397)
T PRK06939 124 -------GKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA 191 (397)
T ss_pred -------CCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC
Confidence 13467999999999999998887777777764 589999999976432222355666555567889999
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccc-hhhhhhhcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGV-EYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gi-e~aDSi~~d~HK~l~~P~~~g~l 374 (375)
++++|.++|+++|+|+++|++|+.+..-- ........++ +.+|.++.++||++..+ -.|.+
T Consensus 192 ~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v 254 (397)
T PRK06939 192 PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYT 254 (397)
T ss_pred CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEE
Confidence 99999999999999999999996432211 0000111232 34689999999999544 34554
No 73
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.50 E-value=7.6e-13 Score=132.89 Aligned_cols=186 Identities=18% Similarity=0.096 Sum_probs=145.4
Q ss_pred hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596 128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT 207 (375)
Q Consensus 128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG 207 (375)
+.+.....+.+++.... .+.++.+.|+..++.++.+.|++++|.+ ..++-++
T Consensus 56 ~~~~~a~~~~~~~~g~g-----~~gsR~i~G~~~~h~~LE~~lA~f~g~e-----------------------~al~f~S 107 (388)
T COG0156 56 PELIEAAKAAIRRYGVG-----AGGSRLISGTSDLHVELEEELADFLGAE-----------------------AALLFSS 107 (388)
T ss_pred HHHHHHHHHHHHHhCCC-----CCCcCcccCCcHHHHHHHHHHHHHhCCC-----------------------cEEEEcc
Confidence 44555666666664322 2367888999999999999999999998 2567777
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596 208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE 287 (375)
Q Consensus 208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~ 287 (375)
|-.||+-.+.+... ++++|+..+..|.|+..++++.+.+++..+.+ |+++||+.++
T Consensus 108 Gy~AN~~~i~~l~~-------------------~~dli~~D~lnHASiidG~rls~a~~~~f~Hn-----D~~~Le~~l~ 163 (388)
T COG0156 108 GFVANLGLLSALLK-------------------KGDLIFSDELNHASIIDGIRLSRAEVRRFKHN-----DLDHLEALLE 163 (388)
T ss_pred cchhHHHHHHHhcC-------------------CCcEEEEechhhhhHHHHHHhCCCcEEEecCC-----CHHHHHHHHH
Confidence 88888877765433 35689999999999999999999999998874 8999999999
Q ss_pred HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhh--cCC--CcccEEEEcCcc
Q psy1596 288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWL--AGV--EYANSIAFNPSK 363 (375)
Q Consensus 288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~--~gi--e~aDSi~~d~HK 363 (375)
+....+..+.+||.-.-.++.|.+.||++|++++++|+.|+.||.||+.+.+= +.-+... .|+ +..|.+.-++-|
T Consensus 164 ~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~~~vdi~~gTlsK 242 (388)
T COG0156 164 EARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEPEEVDIIVGTLGK 242 (388)
T ss_pred hhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCCccceEEEEEchh
Confidence 86644334567777777888999999999999999999999999999998642 2212111 144 346999999999
Q ss_pred cCC
Q psy1596 364 WLM 366 (375)
Q Consensus 364 ~l~ 366 (375)
.++
T Consensus 243 AlG 245 (388)
T COG0156 243 ALG 245 (388)
T ss_pred hhc
Confidence 987
No 74
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.48 E-value=5.1e-13 Score=138.00 Aligned_cols=167 Identities=13% Similarity=-0.004 Sum_probs=117.2
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcE--EEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFI--TFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~G--vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
...++|+.+.+...++||... ...+ +=.++|+.||+.++.+...
T Consensus 77 ~~d~lE~~~~~~~~~~f~~~~--------------------~~~~~nv~~~SG~~AN~av~~aL~~-------------- 122 (475)
T PLN03226 77 YIDQIETLCQKRALEAFRLDP--------------------EKWGVNVQPLSGSPANFAVYTALLQ-------------- 122 (475)
T ss_pred hHHHHHHHHHHHHHHHhCCCc--------------------ceeEEecCcCchHHHHHHHHHHhCC--------------
Confidence 346677777888999998772 1111 1137999999988877533
Q ss_pred hhhhcCceEEEecC------CCchHHHHHHHHcCCeEE----EEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596 236 HAEINSRLVAYCSD------QAHSSVEKAGLIGLVKMR----YIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG 304 (375)
Q Consensus 236 ~~~~~~~~vV~~S~------~aH~Sv~kaa~lg~~~v~----~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G 304 (375)
++..|++.+ .+|.+...++++....+. ..+++ ++|.+|+++|++++.+. .|.+|+++
T Consensus 123 -----pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~-----~pklIv~~-- 190 (475)
T PLN03226 123 -----PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF-----RPKLIIAG-- 190 (475)
T ss_pred -----CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc-----CCeEEEEe--
Confidence 345677634 566666666555443322 33444 67999999999998753 24455443
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.+.+|..-|+++|.++|+++|.+++||+||+.+.+...... ..++.+|.++.++||||+.|.|..+
T Consensus 191 ~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~---~p~~~~Div~~t~hK~L~GP~Gg~I 256 (475)
T PLN03226 191 ASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA---SPFEYCDVVTTTTHKSLRGPRGGMI 256 (475)
T ss_pred cCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC---CCCCCCeEEEecCcccccCCCceEE
Confidence 35578888999999999999999999999999876432211 1234689999999999999999444
No 75
>PRK15029 arginine decarboxylase; Provisional
Probab=99.48 E-value=4.6e-13 Score=144.06 Aligned_cols=168 Identities=16% Similarity=0.106 Sum_probs=132.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+..+++||.+ . .-.+|.|.|.+|+.++.++.. ++.
T Consensus 208 ~eAq~~aA~~fgA~---------~-------------t~FlvNGST~gn~a~i~a~~~-------------------~gd 246 (755)
T PRK15029 208 GESEKYAARVFGAD---------R-------------SWSVVVGTSGSNRTIMQACMT-------------------DND 246 (755)
T ss_pred HHHHHHHHHHhCCC---------c-------------EEEEeCChhHHHHHHHHHhcC-------------------CCC
Confidence 67888999999987 2 236677777888877766543 355
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecC--CC---CCcC-----HHHHHHHHHHhhh----cCCccEEEEEEcCCCCcc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD--DK---LSLR-----GDKLIEAIERDKK----KHLIPFFVCGTLGTTGAC 309 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~---g~md-----~e~Le~aI~~~~~----~g~~p~~Vv~t~GtT~tG 309 (375)
.|+++..+|-|+..|+.+.+..++.+++. +. +.++ ++.++++|++... .+.+|.+|++|.+ |..|
T Consensus 247 ~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~G 325 (755)
T PRK15029 247 VVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDG 325 (755)
T ss_pred EEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcc
Confidence 89999999999999999999999988753 21 3355 9999999976431 3456778999987 7889
Q ss_pred ccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC-------Cccc-EEEEcCcccCCCCCcceee
Q psy1596 310 AFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV-------EYAN-SIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 310 avDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi-------e~aD-Si~~d~HK~l~~P~~~g~l 374 (375)
.+-|+++|+++|+++++.||||.|||+...|.|.+... ..+ ..|| .++-|.||+|.+-..+++|
T Consensus 326 v~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~-sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~L 397 (755)
T PRK15029 326 VCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH-YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYI 397 (755)
T ss_pred eeeCHHHHHHHHHhcCCeEEEECccccccccCcccccc-ccccccccccCCCceEEEEchhhcccchhhhhhh
Confidence 99999999999999999999999999998888876531 122 3588 9999999999877666654
No 76
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.47 E-value=1.1e-12 Score=132.43 Aligned_cols=166 Identities=14% Similarity=0.101 Sum_probs=131.8
Q ss_pred CCCCCchh-hhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC
Q psy1596 122 KPTSPFQK-VIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN 200 (375)
Q Consensus 122 ~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~ 200 (375)
.|+.+.|. ++..+.+.+...+. ..-. ..|..++++.+.+++.+..|++.+ ...
T Consensus 37 ~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~-------~~G~~~LReaia~~~~~~~~~~~~------------------~~~ 90 (393)
T COG0436 37 EPDFPTPEHIIEAAIEALEEGGT-HYTP-------SAGIPELREAIAEKYKRRYGLDVD------------------PEE 90 (393)
T ss_pred CCCCCCCHHHHHHHHHHHhcccC-CCCC-------CCCCHHHHHHHHHHHHHHhCCCCC------------------CCC
Confidence 34555555 44444455555432 1112 257788889999999999987631 223
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC---CCCCc
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD---DKLSL 277 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d---~~g~m 277 (375)
..++|.|+++|+..++.+..+ ++..|++++..+.++.....+.|.+++.||++ .++.+
T Consensus 91 eiivt~Ga~~al~~~~~a~~~-------------------pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~ 151 (393)
T COG0436 91 EIIVTAGAKEALFLAFLALLN-------------------PGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKP 151 (393)
T ss_pred eEEEeCCHHHHHHHHHHHhcC-------------------CCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcC
Confidence 489999999999999887654 45679999999999999999999999999974 48999
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
|++.|+++|++.++ +|+.+.++|+||++ +.+++|+++|++||+||++|.+|....
T Consensus 152 d~~~l~~~i~~ktk------~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~ 209 (393)
T COG0436 152 DLEDLEAAITPKTK------AIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELV 209 (393)
T ss_pred CHHHHHhhcCccce------EEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcc
Confidence 99999999988543 89999999999998 679999999999999999999998864
No 77
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.47 E-value=5e-13 Score=134.08 Aligned_cols=166 Identities=13% Similarity=-0.020 Sum_probs=113.2
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
+...+++.+.+++++++|.+. ..++++|||+++..++.+...
T Consensus 62 ~~~~l~~~~~~~~~~~~g~~~----------------------~~v~~~sgt~a~~~~l~~l~~---------------- 103 (402)
T cd00378 62 YVDEIEDLAIERAKKLFGAEY----------------------ANVQPHSGSQANLAVYFALLE---------------- 103 (402)
T ss_pred HHHHHHHHHHHHHHHHhCCCc----------------------eeeecCCcHHHHHHHHHHhcC----------------
Confidence 345666667889999999871 135555789999877765422
Q ss_pred hhcCceEEEecCCCchHHHHH-----HHHcCCeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc
Q psy1596 238 EINSRLVAYCSDQAHSSVEKA-----GLIGLVKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC 309 (375)
Q Consensus 238 ~~~~~~vV~~S~~aH~Sv~ka-----a~lg~~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG 309 (375)
++..|++++.+|.+.... +...|.+++.++.+. ++.+|+++|++++.+.. +.+|+.+.+ .+|
T Consensus 104 ---~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~-----~~~v~~~~~--~~~ 173 (402)
T cd00378 104 ---PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFK-----PKLIVAGAS--AYP 173 (402)
T ss_pred ---CCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCC-----CCEEEecCc--ccC
Confidence 345788888888655332 333455566666532 68999999999986431 335554443 457
Q ss_pred ccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 310 AFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 310 avDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
...|+++|+++|+++|+++++|++|..+.......... +..+|.++.++|||+..|.+.+++
T Consensus 174 ~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~G~~gg~i~ 235 (402)
T cd00378 174 RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLRGPRGGLIL 235 (402)
T ss_pred CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCCCCCceEEE
Confidence 77899999999999999999999985543321111111 124699999999999777776654
No 78
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.45 E-value=7.9e-13 Score=133.60 Aligned_cols=165 Identities=13% Similarity=0.028 Sum_probs=113.4
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
...+|+.+++++++++|.+. .-+++++||+|+..++.+...
T Consensus 69 ~~~~e~~~~~~la~~~g~~~----------------------~~i~~~sgt~al~~~l~~l~~----------------- 109 (416)
T PRK00011 69 VDVVEQLAIDRAKELFGAEY----------------------ANVQPHSGSQANAAVYFALLK----------------- 109 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCc----------------------eeeecCCchHHHHHHHHHhcC-----------------
Confidence 44555667789999999872 124445678888776654421
Q ss_pred hcCceEEEecCCCchHHHHH---HHHc--CCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 239 INSRLVAYCSDQAHSSVEKA---GLIG--LVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 239 ~~~~~vV~~S~~aH~Sv~ka---a~lg--~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
++..|+++..+|.++... ..+. +.+++.++.+ +++.+|+++|+++|++.. |.+|+.+ .+.+|...
T Consensus 110 --~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~k~v~~~--~~~~~~~~ 180 (416)
T PRK00011 110 --PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHK-----PKLIIAG--ASAYSRPI 180 (416)
T ss_pred --CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcC-----CCEEEEC--CCcCCCcc
Confidence 345788999998765321 1222 4577788876 468999999999997521 3344443 24567778
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
|+++|+++|+++|+++++|+||+.+......+.. .++.+|.++.++|||+..|.+..++
T Consensus 181 ~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~---~~~~~di~~~S~~K~l~g~~gg~i~ 239 (416)
T PRK00011 181 DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPS---PVPHADVVTTTTHKTLRGPRGGLIL 239 (416)
T ss_pred CHHHHHHHHHHcCCEEEEECcchhcccccCccCC---CCCCCcEEEecCCcCCCCCCceEEE
Confidence 9999999999999999999999765432211111 1225799999999999777766554
No 79
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.45 E-value=2.1e-12 Score=129.62 Aligned_cols=152 Identities=14% Similarity=0.064 Sum_probs=116.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..++|+|||+|+.+++.+..- .++.
T Consensus 36 ~~le~~la~~~g~~-----------------------~~v~~~sgt~al~lal~al~~------------------~~Gd 74 (379)
T PRK11658 36 QALEQAFCQLTGNQ-----------------------HAIAVSSATAGMHITLMALGI------------------GPGD 74 (379)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHcCC------------------CCCC
Confidence 67778888888876 268899999999888865411 1345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
.|+++..+|.+...++...|.+++.++++. .+.+|+++|+++|.+. +.+|+.+ +.+|...|+++|+++|+
T Consensus 75 ~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~------tkav~~~---~~~G~~~d~~~i~~~a~ 145 (379)
T PRK11658 75 EVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPR------TKAIIPV---HYAGAPADLDAIRAIGE 145 (379)
T ss_pred EEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccC------CeEEEEe---CCCCCcCCHHHHHHHHH
Confidence 799999999999888888889999999874 4579999999998653 2355533 45899999999999999
Q ss_pred hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
++|+++++|+||+.+...... . + |-...+.++++.+|++..+-
T Consensus 146 ~~gi~vi~D~a~a~g~~~~~~--~-~-g~~g~~~~Sf~~~K~l~~g~ 188 (379)
T PRK11658 146 RYGIPVIEDAAHAVGTYYKGR--H-I-GARGTAIFSFHAIKNITCAE 188 (379)
T ss_pred HcCCeEEEECCCccCCeECCe--e-c-CCCCCEEEeCCCCCcCcccC
Confidence 999999999999976543211 1 1 11124788999999886543
No 80
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.45 E-value=2e-12 Score=132.15 Aligned_cols=146 Identities=11% Similarity=0.036 Sum_probs=115.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.++++.|.. ..++|++||+|+.+++.+... ++.
T Consensus 67 ~~le~~lA~l~g~~-----------------------~av~~sSGt~Al~~al~~ll~-------------------~Gd 104 (433)
T PRK08134 67 AVLEERVAALEGGV-----------------------GAIATASGQAALHLAIATLMG-------------------AGS 104 (433)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence 77888899998865 259999999999988765421 345
Q ss_pred EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+....+. -.|.+++.++++ |+++|+++|++.+ .+|++...++++|.+-|+++|++
T Consensus 105 ~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~~~l~~~i~~~T------klV~~e~~~np~g~v~Di~~I~~ 173 (433)
T PRK08134 105 HIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-----DIDGWRAAIRPNT------RLLFGETLGNPGLEVLDIPTVAA 173 (433)
T ss_pred EEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-----CHHHHHHhcCCCC------eEEEEECCCcccCcccCHHHHHH
Confidence 78999999987766542 246788888764 8999999997643 37788888999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|++++||++|+.+....|. -. .||.+++|+|||++.+-
T Consensus 174 la~~~gi~livD~t~a~~~~~~pl----~~---GaD~vv~S~tK~l~g~g 216 (433)
T PRK08134 174 IAHEAGVPLLVDSTFTTPYLLRPF----EH---GADLVYHSATKFLGGHG 216 (433)
T ss_pred HHHHcCCEEEEECCCcccccCCch----hc---CCCEEEeccccccCCCC
Confidence 999999999999999887653321 11 47999999999987654
No 81
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.45 E-value=2e-12 Score=128.69 Aligned_cols=173 Identities=16% Similarity=0.158 Sum_probs=126.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+.+|.+. ++...++|+|+++++..++.+...
T Consensus 61 ~G~~~lr~~la~~~~~~~~~~~-------------------~~~~i~~t~g~~~al~~~~~~l~~--------------- 106 (382)
T PRK06108 61 LGIPELREALARYVSRLHGVAT-------------------PPERIAVTSSGVQALMLAAQALVG--------------- 106 (382)
T ss_pred CCCHHHHHHHHHHHHHHhCCCc-------------------CcceEEEeCChHHHHHHHHHHhcC---------------
Confidence 4567788899999999888653 334688999999998777665422
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
++..|++++.+|..+...+...|.+++.+|.+. ++.+|+++|++++++. +.+|+.+.++++||.+
T Consensus 107 ----~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~NPtG~~~~ 176 (382)
T PRK06108 107 ----PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPR------TRALFINSPNNPTGWTAS 176 (382)
T ss_pred ----CCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCCCCCcccC
Confidence 234688899999999888888888999999863 4679999999988542 3467778899999976
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccCccc----chhhhhhhcCCCcccEEEEcCcccCCC-CCcceee
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGSSFI----CPEFRKWLAGVEYANSIAFNPSKWLMV-HFDCTAM 374 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~----~~~~~~~~~gie~aDSi~~d~HK~l~~-P~~~g~l 374 (375)
+++++|+++|+++|+|+++|.+|+....- .+.+.... ....-..+..+++|.++. ...+|.+
T Consensus 177 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~~ 244 (382)
T PRK06108 177 RDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIA-EPDDRIIFVNSFSKNWAMTGWRLGWL 244 (382)
T ss_pred HHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcC-CCcCCEEEEeechhhccCcccceeee
Confidence 56889999999999999999999876432 01111111 111124567799997653 4456665
No 82
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.44 E-value=2.8e-12 Score=128.30 Aligned_cols=161 Identities=14% Similarity=0.141 Sum_probs=119.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..++++|||+|+..++.+..- .++.
T Consensus 32 ~~le~~la~~~g~~-----------------------~~v~~~sgt~al~~~l~al~~------------------~~Gd 70 (380)
T TIGR03588 32 PAFEEALAEYVGAK-----------------------YAVAFNSATSALHIACLALGV------------------GPGD 70 (380)
T ss_pred HHHHHHHHHHHCCC-----------------------eEEEEcCHHHHHHHHHHHcCC------------------CCCC
Confidence 56777788888876 257788999998888765411 1345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
.|+++..+|.+...++...|.+++.++++ +++.+|+++|+++|++... ..+.+|+.+ +.+|...++++|+++|+
T Consensus 71 ~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~--~~t~~v~~~---~~~G~~~~~~~i~~l~~ 145 (380)
T TIGR03588 71 RVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKG--KLPKAIVPV---DFAGKSVDMQAIAALAK 145 (380)
T ss_pred EEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccC--CCceEEEEe---CCCCccCCHHHHHHHHH
Confidence 79999999999998888888899999986 4688999999999974211 123455544 35798999999999999
Q ss_pred hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccCCCCCccee
Q psy1596 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWLMVHFDCTA 373 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l~~P~~~g~ 373 (375)
++|+++++|+||+.+..+.. +. +...+.+|..++++| ||+..+-|..+
T Consensus 146 ~~~~~lI~D~a~a~g~~~~~--~~-~g~~~~~d~~~~S~~~~K~~~~~~GG~v 195 (380)
T TIGR03588 146 KHGLKIIEDASHALGAEYGG--KP-VGNCRYADATVFSFHPVKIITTAEGGAV 195 (380)
T ss_pred HcCCEEEEECCCcccCccCC--Ee-CCCccccceEEEecCCCCcccccCceEE
Confidence 99999999999998754321 11 111124699999999 88877644333
No 83
>PRK09082 methionine aminotransferase; Validated
Probab=99.43 E-value=3.5e-12 Score=127.85 Aligned_cols=168 Identities=10% Similarity=0.019 Sum_probs=126.0
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++++.+|+.+++|.+.+ .....++|+|+|+++..++.+...
T Consensus 67 ~G~~~lr~~~a~~l~~~~~~~~~------------------~~~~i~~t~G~~~al~~~~~~~~~--------------- 113 (386)
T PRK09082 67 TGVAALREAIAAKTARLYGRQYD------------------ADSEITVTAGATEALFAAILALVR--------------- 113 (386)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCC------------------CCCcEEEeCCHHHHHHHHHHHHcC---------------
Confidence 46778889999999999998631 112588999999998887765422
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D 312 (375)
++..|+++..+|.++..+++..|.+++.+|.+ +++.+|+++|++++++. +.+|+.+.++++||.+ +
T Consensus 114 ----~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~ 183 (386)
T PRK09082 114 ----PGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWSAA 183 (386)
T ss_pred ----CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCCHH
Confidence 34578899999999999998888899999986 46889999999988642 4467777889999976 8
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
++++|+++|+++++++++|.+|+....-. +.... +.++..-.-+.-++.|.++.|
T Consensus 184 ~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~-~~~~~~~~i~~~S~SK~~~~~ 241 (386)
T PRK09082 184 DMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLR-HPELRERAFVVSSFGKTYHVT 241 (386)
T ss_pred HHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhh-CcCccCcEEEEeechhhccch
Confidence 89999999999999999999997643211 01111 122222345667889987644
No 84
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.42 E-value=4e-12 Score=127.79 Aligned_cols=150 Identities=11% Similarity=0.039 Sum_probs=115.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..+++++|+.|+..++. .. .++.
T Consensus 50 ~~le~~la~l~g~~-----------------------~~l~~~sG~~al~~~l~-ll-------------------~~Gd 86 (378)
T TIGR01329 50 TALESLLAKLDKAD-----------------------RAFAFSSGMAALDVITR-LL-------------------NNGD 86 (378)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHH-Hh-------------------CCCC
Confidence 78889999998876 25778888876544332 11 1345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..|.+..+.+ ...|.+++.++.+ |+++++++|++. +.+|+.+.+++++|.+-|+++|++
T Consensus 87 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-----d~~~le~~i~~~------tklv~le~psnptg~v~dl~~I~~ 155 (378)
T TIGR01329 87 EIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT-----DLDKVKAALGPK------TKLVLLESPTNPLQKIVDIRKISE 155 (378)
T ss_pred EEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCeeecHHHHHH
Confidence 7888999998876643 3357788888763 899999998643 448888999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM 374 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l 374 (375)
+|+++|++++||++|+.+....|- -. .+|.+..++|||++.|.+ .|++
T Consensus 156 la~~~g~~vivD~a~~~~~~~~~l----~~---g~Di~v~S~tK~l~G~~~~~~G~v 205 (378)
T TIGR01329 156 MAHAQNALVVVDNTMMSPLLCNPL----EL---GADIVYHSATKFLAGHSDVMAGVL 205 (378)
T ss_pred HHHHcCCEEEEECCCcccccCChh----hc---CCcEEEEecceeccCCccceeEEE
Confidence 999999999999999776432221 11 469999999999999877 7765
No 85
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.41 E-value=3.5e-12 Score=126.87 Aligned_cols=169 Identities=15% Similarity=0.156 Sum_probs=136.2
Q ss_pred hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596 156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ-TTASESTLICLLAGRTEAIRKYQQSHPEL 234 (375)
Q Consensus 156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~ 234 (375)
..|..++-.++.+||+++.|++. ..++ ..|+++-+++|++.|.+...+
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~Da-----------------------vsLQP~AGAqGE~aGll~Ir~YHe~r-------- 152 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDA-----------------------VSLQPNAGAQGEYAGLLAIRAYHESR-------- 152 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCce-----------------------eeccCCCCcchhhHHHHHHHHHHHHc--------
Confidence 46778888999999999999982 2333 367888999999988865332
Q ss_pred hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-cc
Q psy1596 235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DN 313 (375)
Q Consensus 235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dp 313 (375)
+...|.++++++.+|-.....+.++|.+|+.|+++++|.+|+++|++++.++++ ++..|.++| .|.+ .+
T Consensus 153 ---G~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~ 222 (496)
T COG1003 153 ---GEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLA------ALMITNPST-LGVFEED 222 (496)
T ss_pred ---CCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhcccee------EEEeccCcc-cccchhh
Confidence 112466899999999999999999999999999999999999999999986544 788898876 5666 78
Q ss_pred HHHHHHHHHhcCCEEEEecccccCc--ccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSS--FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~--~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
|.||++|.+++|..+..|||---.. +..| |-=.+|.+-+|.||++-+|.|.|
T Consensus 223 I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP-------Gd~G~DV~HlNLHKTF~iPHGGG 276 (496)
T COG1003 223 IREICEIVHEAGGQVYYDGANLNAIVGLARP-------GDMGFDVVHLNLHKTFCIPHGGG 276 (496)
T ss_pred HHHHHHHHHHcCCEEEecCcchhhhhccccc-------cccccceEEeecccccccCCCCC
Confidence 9999999999999999999853321 1122 21246999999999999999876
No 86
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.41 E-value=5.9e-12 Score=126.10 Aligned_cols=156 Identities=11% Similarity=0.068 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
.+.+++.+++++.+|.+ ..++|+|||.|+.+++.++.- .
T Consensus 31 ~~~~~~e~~la~~~g~~-----------------------~~v~~~sgt~al~~~l~~~~~------------------~ 69 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSA-----------------------KVLLTPSCTAALEMAALLLDI------------------Q 69 (375)
T ss_pred HHHHHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHhCC------------------C
Confidence 34478889999988775 378999999998776654310 1
Q ss_pred CceEEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
++..|+++..+|.++..++...|.+++.+++|++ +.+|+++|+++|++. +.+|+.+ +.+|...++++|.+
T Consensus 70 ~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~------tk~i~~~---~~~G~~~~~~~i~~ 140 (375)
T PRK11706 70 PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPK------TRAIVPV---HYAGVACEMDTIMA 140 (375)
T ss_pred CCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCC------CeEEEEe---CCCCCccCHHHHHH
Confidence 3457999999999999999888899999999765 589999999998653 3355554 35898899999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccCCCCCcc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWLMVHFDC 371 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l~~P~~~ 371 (375)
+|+++|+++++|+||+.+..... +. ... ..|.-++|+| |.+...-+.
T Consensus 141 la~~~~i~vIeD~a~a~g~~~~~--~~-~g~--~~~~~~~Sf~~~K~l~~g~gG 189 (375)
T PRK11706 141 LAKKHNLFVVEDAAQGVMSTYKG--RA-LGT--IGHIGCFSFHETKNYTAGEGG 189 (375)
T ss_pred HHHHcCCEEEEECccccccccCC--ee-eec--CcCEEEEeCCCCccccccCCe
Confidence 99999999999999998763221 11 111 2355566666 988654333
No 87
>PRK08912 hypothetical protein; Provisional
Probab=99.40 E-value=6.8e-12 Score=125.63 Aligned_cols=174 Identities=12% Similarity=-0.003 Sum_probs=126.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|..++++.+.+|+.+.+|++. ++. ..++|+|+++++..++.+..+
T Consensus 63 ~G~~~lr~~ia~~~~~~~g~~~-------------------~~~~~i~~t~G~~~al~~~~~~~~~-------------- 109 (387)
T PRK08912 63 MGLPELRQAVAAHYARFQGLDL-------------------DPETEVMVTSGATEALAAALLALVE-------------- 109 (387)
T ss_pred CCcHHHHHHHHHHHHHHhCCCC-------------------CCcccEEEeCCcHHHHHHHHHHhcC--------------
Confidence 4566778888889988888763 333 689999999998666654321
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-- 312 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-- 312 (375)
++..|++++.+|..+...+...|.+++.+|.++ ++.+|+++|++++... +.+|+.+.++++||.+-
T Consensus 110 -----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~ 178 (387)
T PRK08912 110 -----PGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPR 178 (387)
T ss_pred -----CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCH
Confidence 345788999999999988888888999999864 6789999999988542 34677788999999874
Q ss_pred -cHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596 313 -NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGVEYANSIAFNPSKWLMVH-FDCTAM 374 (375)
Q Consensus 313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gie~aDSi~~d~HK~l~~P-~~~g~l 374 (375)
.+++|+++|+++++++++|.+|+....-...+.. .+.++..-+.+..+++|.++.| .-+|.+
T Consensus 179 ~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 244 (387)
T PRK08912 179 EELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV 244 (387)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEE
Confidence 5888999999999999999999754321101111 1122223467889999987643 225543
No 88
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.40 E-value=6.3e-12 Score=126.30 Aligned_cols=128 Identities=13% Similarity=0.108 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
+.++..+++++.+|.+ ..++|+|||+|+..++.+.. ..+
T Consensus 32 ~~~~~e~~la~~~g~~-----------------------~~v~~~sgt~aL~~~l~al~------------------~~p 70 (376)
T TIGR02379 32 FSRRCETWLENRTGTK-----------------------KALLTPSCTAALEMAALLLD------------------IQP 70 (376)
T ss_pred HHHHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHcC------------------CCC
Confidence 3478889999988765 37999999999877765431 024
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
+..|+++..+|.+...++...|.+++.+++|++ +.+|+++|++++++. +.+|+. ++.+|..-++++|.++
T Consensus 71 Gd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~------tk~Iip---~~~~G~~~d~~~I~~l 141 (376)
T TIGR02379 71 GDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHR------TKAIVP---VHYAGVACDMDTIMAL 141 (376)
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcC------ceEEEE---eCCCCCccCHHHHHHH
Confidence 567999999999999998888899999999865 689999999998653 335554 4567999999999999
Q ss_pred HHhcCCEEEEecccccCcc
Q psy1596 321 CEKEGLWLHVDAAYAGSSF 339 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~ 339 (375)
|+++|+++++|+||+.+..
T Consensus 142 a~~~~i~vIeDaa~~~g~~ 160 (376)
T TIGR02379 142 ANKHQLFVIEDAAQGVMST 160 (376)
T ss_pred HHHCCCEEEEECccccCCc
Confidence 9999999999999998753
No 89
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.39 E-value=6.1e-12 Score=128.49 Aligned_cols=161 Identities=16% Similarity=0.060 Sum_probs=112.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..++|+|||+|+..++.+... ++.
T Consensus 56 ~~Leeaia~~~g~~-----------------------~vv~t~~Gt~Al~la~~al~~-------------------pGD 93 (431)
T cd00617 56 YDLEDAVQDLFGFK-----------------------HIIPTHQGRGAENILFSILLK-------------------PGR 93 (431)
T ss_pred HHHHHHHHHHHCCC-----------------------eEEEcCCHHHHHHHHHHHhCC-------------------CCC
Confidence 55666677777776 379999999999988866432 234
Q ss_pred EEEecCCCchHHHH-HHHHcCCeEEEEecCC----------CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-ccc
Q psy1596 244 VAYCSDQAHSSVEK-AGLIGLVKMRYIESDD----------KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-CAF 311 (375)
Q Consensus 244 vV~~S~~aH~Sv~k-aa~lg~~~v~~Vp~d~----------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-Gav 311 (375)
+| ++ ..|+.... ++.+.|.+++.+++++ .|.||+++|+++|++... ..+.+|+++.+++.+ |.+
T Consensus 94 ~V-~~-~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~ 169 (431)
T cd00617 94 TV-PS-NMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQP 169 (431)
T ss_pred EE-cc-CCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCcc
Confidence 55 44 45655444 4578888999998863 245999999999975411 124467788888877 665
Q ss_pred ---ccHHHHHHHHHhcCCEEEEecccccC-cccc----hhhh-----hhhc-CCCcccEEEEcCcccCCCCCc
Q psy1596 312 ---DNLEELGPICEKEGLWLHVDAAYAGS-SFIC----PEFR-----KWLA-GVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 312 ---Dpl~eI~~ia~~~~iwlHVDaA~gg~-~~~~----~~~~-----~~~~-gie~aDSi~~d~HK~l~~P~~ 370 (375)
++|++|.++|++||+|||.|+|+... +.+. +.++ .... -...+|++++++||-+.+|.|
T Consensus 170 ~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G 242 (431)
T cd00617 170 VSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG 242 (431)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc
Confidence 57889999999999999999997643 2221 1111 1110 113589999999998888874
No 90
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.39 E-value=1e-11 Score=129.04 Aligned_cols=181 Identities=15% Similarity=0.139 Sum_probs=130.5
Q ss_pred hcchhHHHHHHHHHHHHHcC--CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCc
Q psy1596 156 ILDRDKYSSKVLDFVSKENA--TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPE 233 (375)
Q Consensus 156 ~~g~~~le~~v~~wLa~llG--~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~ 233 (375)
..|...+++++.+|+.+..| .+. ++...++|+|+++++.+.+.+..+
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v-------------------~pe~Ivit~Ga~~al~~l~~~l~~------------ 141 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTF-------------------DPERVVMSGGATGANETIMFCLAD------------ 141 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcC-------------------ChhhEEEccchHHHHHHHHHHhCC------------
Confidence 35777788999999999888 332 345689999999998877765432
Q ss_pred chhhhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596 234 LEHAEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA 310 (375)
Q Consensus 234 ~~~~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa 310 (375)
++..|+++...+..+...+. ..|.+++.||++ +++.+|+++|++++++..+.+..+.+|+.+.++++||.
T Consensus 142 -------pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~ 214 (496)
T PLN02376 142 -------PGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214 (496)
T ss_pred -------CCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCc
Confidence 35679999999999998776 478899999984 56789999999987654433445667778899999999
Q ss_pred c---ccHHHHHHHHHhcCCEEEEecccccCcccchhh---hhhhcCCC----cccE--EEEcCcccCCCC-Ccceee
Q psy1596 311 F---DNLEELGPICEKEGLWLHVDAAYAGSSFICPEF---RKWLAGVE----YANS--IAFNPSKWLMVH-FDCTAM 374 (375)
Q Consensus 311 v---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~---~~~~~gie----~aDS--i~~d~HK~l~~P-~~~g~l 374 (375)
+ +.+++|+++|+++++++++|.+|+....-.+.+ ........ ..|- +..++.|.++.| +-+|.+
T Consensus 215 ~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~l 291 (496)
T PLN02376 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIV 291 (496)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEE
Confidence 8 457788899999999999999999754221111 11111100 0122 357999998655 555554
No 91
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.39 E-value=1.7e-11 Score=123.75 Aligned_cols=146 Identities=11% Similarity=0.054 Sum_probs=113.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..++|+||++|+..++.+... ++.
T Consensus 64 ~~le~~la~l~g~~-----------------------~~v~~ssG~~Ai~~al~al~~-------------------~Gd 101 (390)
T PRK08133 64 TMFQERLAALEGAE-----------------------ACVATASGMAAILAVVMALLQ-------------------AGD 101 (390)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence 67888899998865 268999999999988765421 345
Q ss_pred EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+.... +...|.+++.++++ |+++++++|++. +.+|+++.+++++|.+.|+++|++
T Consensus 102 ~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~------tklV~ie~p~NptG~v~dl~~I~~ 170 (390)
T PRK08133 102 HVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT-----DLDAWRAAVRPN------TKLFFLETPSNPLTELADIAALAE 170 (390)
T ss_pred EEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCCcCCHHHHHH
Confidence 788898888765543 33467788888764 789999988653 347888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|+++++|++|+.+....| ... .+|.++.++||+++.+-
T Consensus 171 la~~~gi~livD~t~~~~~~~~p----l~~---g~Divv~S~sK~~~g~g 213 (390)
T PRK08133 171 IAHAAGALLVVDNCFCTPALQQP----LKL---GADVVIHSATKYLDGQG 213 (390)
T ss_pred HHHHcCCEEEEECCCcccccCCc----hhh---CCcEEEeecceeecCCc
Confidence 99999999999999977654332 111 36999999999987654
No 92
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.39 E-value=2.1e-12 Score=129.59 Aligned_cols=152 Identities=11% Similarity=-0.122 Sum_probs=113.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC-ChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT-TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts-GGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+++++.+++++|.+ +....+|++ +||+++-.++..... .++
T Consensus 51 ~~~r~~l~~l~~~~--------------------~~~~v~~~~gs~T~~~~~~~~~l~~------------------~~~ 92 (378)
T PRK03080 51 KRVIEGTRELLSLP--------------------EGYEVGIVPGSDTGAWEMALWSLLG------------------ARR 92 (378)
T ss_pred HHHHHHHHHHhCCC--------------------CCceEEEECCchHHHHHHHHHhcCC------------------CCc
Confidence 78999999999997 334578775 889887766644311 012
Q ss_pred eEEEecCCCchHHHHH--HHHcCC-eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKA--GLIGLV-KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~ka--a~lg~~-~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
..++. ...|.+.... ++-.+. +++.++.+..+.+|+++++. . ..|+++..+|.+|.+.|+++|++
T Consensus 93 ~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~~-----~------~~V~~~h~~t~tG~~~pi~~I~~ 160 (378)
T PRK03080 93 VDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVDF-----D------RDVVFTWNGTTTGVRVPVARWIG 160 (378)
T ss_pred ceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcCC-----C------CCEEEEecCCccceeccchhhcc
Confidence 23444 4677775443 233356 88888887777888776432 1 14788999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|++++||++++.+..... +. .+|.+.+++||||+.|.|+|++|
T Consensus 161 --~~~g~~~vVDa~qs~G~~pid-----v~---~iD~~~~s~~K~l~~P~G~g~l~ 206 (378)
T PRK03080 161 --ADREGLTICDATSAAFALPLD-----WS---KLDVYTFSWQKVLGGEGGHGMAI 206 (378)
T ss_pred --ccCCCeEEEecccccccCCCC-----HH---HCcEEEEehhhhCCCCCceEEEE
Confidence 889999999999999876432 11 25999999999999999999986
No 93
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.39 E-value=2.8e-11 Score=120.01 Aligned_cols=160 Identities=13% Similarity=0.056 Sum_probs=114.1
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.+...+..++.+++++++|.+ ..+++++|+++++.++.+..
T Consensus 80 ~g~~~~~~~l~~~la~~~~~~-----------------------~~i~~~~g~~~~~~~l~~~~---------------- 120 (385)
T PRK05958 80 TGNSPAHEALEEELAEWFGAE-----------------------RALLFSSGYAANLAVLTALA---------------- 120 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCC-----------------------cEEEECcHHHHHHHHHHHhC----------------
Confidence 344555678899999998854 35888889998887654321
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE 316 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e 316 (375)
.++..|++++..|.+...++.+.+.+++.+|. .|++.|++.++.... .+.+++.....+.+|.++++++
T Consensus 121 ---~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~---~~~lvi~~~~~~~~G~~~~l~~ 189 (385)
T PRK05958 121 ---GKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRA---GRALIVTESVFSMDGDLAPLAE 189 (385)
T ss_pred ---CCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccC---CCeEEEEEecccCCCCcCCHHH
Confidence 13457889999999999998888888888875 388999999875311 1345555556778999999999
Q ss_pred HHHHHHhcCCEEEEecccccCccc-ch-hhhhhhcCCC-ccc-EEEEcCcccCCC
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFI-CP-EFRKWLAGVE-YAN-SIAFNPSKWLMV 367 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~-~~-~~~~~~~gie-~aD-Si~~d~HK~l~~ 367 (375)
|+++|+++|+|+++|++|+.+.+- .. .+.. ..++. ..| .+..++||+++.
T Consensus 190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~-~~~~~~~~~~i~~~s~sK~~~~ 243 (385)
T PRK05958 190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAA-EAGLAGEPDVILVGTLGKALGS 243 (385)
T ss_pred HHHHHHHhCCEEEEECcccccccCCCCCchHH-hhCCCCCCceEEEEechhhccc
Confidence 999999999999999999755321 00 0101 11221 223 567899999864
No 94
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.39 E-value=1.3e-11 Score=116.52 Aligned_cols=163 Identities=13% Similarity=0.066 Sum_probs=138.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
....+.|++++|++. .=+|.|+-++-+..+.+... +++
T Consensus 64 ~~F~~dlaeFlg~D~-----------------------~R~t~GARe~KfavMhal~~-------------------~gd 101 (382)
T COG1103 64 KDFLEDLAEFLGMDE-----------------------VRVTAGAREAKFAVMHALCK-------------------EGD 101 (382)
T ss_pred HHHHHHHHHHhCCce-----------------------eeecccchhhHHHHHHHhcc-------------------CCC
Confidence 556667999999982 46788999988877766543 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcC-CccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKH-LIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g-~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
.|++...+||+-.-|+...|.++..||.. ++++++++...+.|++-.+++ ..|.+.+.|......|.+.|-+.+++|
T Consensus 102 ~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~i 181 (382)
T COG1103 102 WVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKI 181 (382)
T ss_pred EEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHH
Confidence 78899999999999999999999999964 578999999999999877764 678899999999999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
|+++++++.+.+||..+-+... .+.+ .||+|+-|+||.+-+.-+||+|
T Consensus 182 c~e~gvPlllN~AYt~Grmpvs-----~ke~-g~DFiVgSGHKsmAAs~PiGvl 229 (382)
T COG1103 182 CREYGVPLLLNCAYTVGRMPVS-----GKEI-GADFIVGSGHKSMAASAPIGVL 229 (382)
T ss_pred HHHcCCceEeecceeecccccc-----cccc-CCCEEEecCccchhccCCeeEE
Confidence 9999999999999999865321 1112 5899999999999999999986
No 95
>PRK10534 L-threonine aldolase; Provisional
Probab=99.39 E-value=8.9e-12 Score=121.98 Aligned_cols=160 Identities=19% Similarity=0.182 Sum_probs=107.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..++++||+++++.++.+... ++.
T Consensus 37 ~~L~~~la~~~g~~-----------------------~~~v~~~g~~a~~~~l~~~~~-------------------~gd 74 (333)
T PRK10534 37 NALQDYAAELSGKE-----------------------AALFLPTGTQANLVALLSHCE-------------------RGE 74 (333)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEeCchHHHHHHHHHHhcC-------------------CCC
Confidence 67788889988987 248999999999988875422 234
Q ss_pred EEEecCCCchHHHHH--H-HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHH---HH
Q psy1596 244 VAYCSDQAHSSVEKA--G-LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLE---EL 317 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka--a-~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~---eI 317 (375)
.|+++...|.+..++ + .+++.+++.++.++++.+|+++|++++.+...++..+.+|+.+ ++++|.+-+.+ +|
T Consensus 75 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~--np~~G~v~~~~~l~~i 152 (333)
T PRK10534 75 EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLE--NTHNGKVLPREYLKQA 152 (333)
T ss_pred eeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEe--cCCCCeecCHHHHHHH
Confidence 577888888654432 3 3455677888888889999999999986432111123345544 44569986554 55
Q ss_pred HHHHHhcCCEEEEecccccCccc--chhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFI--CPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~--~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+++|+++++|++||+||...... ........ ...|.++++++|.++.+.|
T Consensus 153 ~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~~G 204 (333)
T PRK10534 153 WEFTRERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTPVG 204 (333)
T ss_pred HHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCccc
Confidence 67899999999999998743210 11111111 2347778899998877743
No 96
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.39 E-value=1e-11 Score=124.28 Aligned_cols=168 Identities=11% Similarity=0.064 Sum_probs=122.8
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..|... ++...++|+|+++++..++.+...
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~-------------------~~~~i~~~~g~~~a~~~~~~~~~~--------------- 113 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDY-------------------DPSQVIVTTGAKQALYNAFMALLD--------------- 113 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCC-------------------CHHHEEEeCCcHHHHHHHHHHhcC---------------
Confidence 3556777888888877777542 234589999999998877665422
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|++++.+|..+..+++..|.+++.+|.+ +.+.+|+++|++++++. +.+|+++.+++++|.+
T Consensus 114 ----~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~ 183 (393)
T PRK05764 114 ----PGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPK------TKALILNSPSNPTGAVYSP 183 (393)
T ss_pred ----CCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCcc------ceEEEEECCCCCCCcccCH
Confidence 23478899999999988888888899999986 35689999999988542 2367778889999987
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++++|+++|++|++|+++|.+|+....-.+ .......+...-+-+..++.|.++.|
T Consensus 184 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~ 243 (393)
T PRK05764 184 EELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMT 243 (393)
T ss_pred HHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCc
Confidence 6799999999999999999999986532111 11121112222356777899998755
No 97
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.39 E-value=1.9e-11 Score=122.79 Aligned_cols=139 Identities=13% Similarity=0.096 Sum_probs=110.8
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+++++.+|.+.+ ++...++|+|+++++..++.+..+
T Consensus 65 ~G~~~lr~~~~~~l~~~~g~~~~------------------~~~~i~~t~G~~~~l~~~~~~~~~--------------- 111 (389)
T PRK05957 65 QGIPPLLEAITQKLQQDNGIELN------------------NEQAIVVTAGSNMAFMNAILAITD--------------- 111 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCC------------------CCCeEEEeCChHHHHHHHHHHhcC---------------
Confidence 56667778999999999997621 134578999999988776654321
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN--- 313 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp--- 313 (375)
++..|++++..+......++..|.+++.+|.++++.+|+++|+++|++. +.+|+.+.++++||.+-+
T Consensus 112 ----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~klv~~~~p~NPtG~~~~~~~ 181 (389)
T PRK05957 112 ----PGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPK------TRAIVTISPNNPTGVVYPEAL 181 (389)
T ss_pred ----CCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcC------ceEEEEeCCCCCCCcCcCHHH
Confidence 3457888888887777766777889999999888899999999998643 346777889999999865
Q ss_pred HHHHHHHHHhcCCEEEEecccccCc
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+++|+++|+++|+++++|.+|+...
T Consensus 182 ~~~i~~~a~~~~~~li~De~y~~~~ 206 (389)
T PRK05957 182 LRAVNQICAEHGIYHISDEAYEYFT 206 (389)
T ss_pred HHHHHHHHHHcCcEEEEeccchhcc
Confidence 9999999999999999999998653
No 98
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.38 E-value=1.2e-11 Score=125.79 Aligned_cols=173 Identities=16% Similarity=0.143 Sum_probs=120.2
Q ss_pred cccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHH
Q psy1596 147 EADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRK 226 (375)
Q Consensus 147 ~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~ 226 (375)
+.|.|++.+ .++.+.+++++|++ ..++|++||.|..++..+.
T Consensus 65 e~yag~~s~--------~~lE~~va~~~G~~-----------------------~av~v~sGT~Al~ll~~l~------- 106 (450)
T TIGR02618 65 EAYAGSRNF--------YHLERTVRELYGFK-----------------------YVVPTHQGRGAENLLSQIA------- 106 (450)
T ss_pred hhhcCCCcH--------HHHHHHHHHHHCCC-----------------------eEEEcCCHHHHHHHHHHhC-------
Confidence 457777666 78888899999987 3799999999955432111
Q ss_pred hhccCCcchhhhhcCceEEEecCCCchHHHHH-HHHcCCeEEEEecC----------CCCCcCHHHHHHHHHHhhhcCCc
Q psy1596 227 YQQSHPELEHAEINSRLVAYCSDQAHSSVEKA-GLIGLVKMRYIESD----------DKLSLRGDKLIEAIERDKKKHLI 295 (375)
Q Consensus 227 ~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~d----------~~g~md~e~Le~aI~~~~~~g~~ 295 (375)
+.++.+| +..+|++-.++ ..+.|..++-++.+ .+|.||+++|+++|++... ...
T Consensus 107 ------------l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~ 171 (450)
T TIGR02618 107 ------------IKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKI 171 (450)
T ss_pred ------------CCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-ccc
Confidence 0133444 66888888887 46666666666443 3689999999999985322 123
Q ss_pred cEEEEEEcCCCCc-ccc---ccHHHHHHHHHhcCCEEEEeccccc-Ccccc----hhhhh-----hhcC-CCcccEEEEc
Q psy1596 296 PFFVCGTLGTTGA-CAF---DNLEELGPICEKEGLWLHVDAAYAG-SSFIC----PEFRK-----WLAG-VEYANSIAFN 360 (375)
Q Consensus 296 p~~Vv~t~GtT~t-Gav---Dpl~eI~~ia~~~~iwlHVDaA~gg-~~~~~----~~~~~-----~~~g-ie~aDSi~~d 360 (375)
+ +|+++..++.. |.. +++++|.++|++||+++|.|||+.. .+++. +.+.. ..+. ...+|+++++
T Consensus 172 ~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S 250 (450)
T TIGR02618 172 P-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMS 250 (450)
T ss_pred C-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEe
Confidence 3 45555555544 666 7899999999999999999999988 44442 11211 1111 3468999999
Q ss_pred CcccCCCCCccee
Q psy1596 361 PSKWLMVHFDCTA 373 (375)
Q Consensus 361 ~HK~l~~P~~~g~ 373 (375)
+||-.++|.|.-+
T Consensus 251 ~~Kd~~~~~GG~l 263 (450)
T TIGR02618 251 GKKDCLVNIGGFL 263 (450)
T ss_pred eccCCCCCCceEE
Confidence 9999999996543
No 99
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.38 E-value=4.3e-11 Score=121.07 Aligned_cols=167 Identities=11% Similarity=0.045 Sum_probs=123.5
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++.+.+|+++.+|.+. ++ ...++|+|+++++..++.+..+
T Consensus 78 ~G~~~LR~aia~~l~~~~g~~~-------------------~~~~~I~it~Ga~~al~~~~~~l~~-------------- 124 (405)
T PRK06207 78 RGDADIRELLAARLAAFTGAPV-------------------DAADELIITPGTQGALFLAVAATVA-------------- 124 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCCEEEeCCcHHHHHHHHHHhcC--------------
Confidence 4566777899999999999863 33 5689999999998777665422
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-----CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-----DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA 310 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-----~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa 310 (375)
++..|++...++......+...|.+++.|+++ +++.+|+++|++++++. +.+|+.+.++|+||.
T Consensus 125 -----~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~ 193 (405)
T PRK06207 125 -----RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAG------VRVFLFSNPNNPAGV 193 (405)
T ss_pred -----CCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhc------CeEEEECCCCCCCCc
Confidence 34578899999999888888888899999875 35789999999998653 337888889999999
Q ss_pred cc---cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC-ccc--EEEEcCcccCCCC
Q psy1596 311 FD---NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-YAN--SIAFNPSKWLMVH 368 (375)
Q Consensus 311 vD---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~aD--Si~~d~HK~l~~P 368 (375)
+- .+++|+++|+++|+||++|.+|+-...-...+.. +..+. ..| .+.-++.|.++.|
T Consensus 194 ~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~lp 256 (405)
T PRK06207 194 VYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTH-LRALPIDPENVITIMGPSKTESLS 256 (405)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCc-hhcCCCCcCcEEEEecchhhccCc
Confidence 85 4888999999999999999999875321100000 11110 011 4667889988756
No 100
>PRK12414 putative aminotransferase; Provisional
Probab=99.38 E-value=9.6e-12 Score=124.71 Aligned_cols=168 Identities=11% Similarity=0.049 Sum_probs=123.0
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+++++|.+.+ .....++|+||++++..++.+...
T Consensus 66 ~G~~~lr~~ia~~l~~~~g~~~~------------------~~~~i~it~g~~~al~~~~~~l~~--------------- 112 (384)
T PRK12414 66 AGIAALREALAEKTERLYGARYD------------------PASEVTVIASASEGLYAAISALVH--------------- 112 (384)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCC------------------CCCcEEEECChHHHHHHHHHHhcC---------------
Confidence 45677778999999999998631 123589999999998776654321
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D 312 (375)
++..|++++.+|......++..|.+++.||.+ +++.+|++.|++++++. +.+|+.+.++++||.+ +
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~s~~ 182 (384)
T PRK12414 113 ----PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVFSAA 182 (384)
T ss_pred ----CCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCCCHH
Confidence 34578889999988888888778899999987 46789999999988542 4467777899999997 7
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccc-h--hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFIC-P--EFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~-~--~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
++++|+++|+++|+|+++|++|.-...-. + .... +.++..--.+.-++.|.++.|
T Consensus 183 ~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~-~~~~~~~~i~~~SfSK~~~~p 240 (384)
T PRK12414 183 DLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMAR-HRELAERSVIVSSFGKSYHVT 240 (384)
T ss_pred HHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCccc-CcCccCcEEEEecccccccCc
Confidence 89999999999999999999998543210 0 0111 111111125777899987644
No 101
>PRK07777 aminotransferase; Validated
Probab=99.38 E-value=1.4e-11 Score=123.47 Aligned_cols=168 Identities=11% Similarity=0.010 Sum_probs=123.1
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|..++++.+.+|+.+.+|++. .+. ..++|+|||+++..++.+...
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~~i~~t~G~~~al~~~~~~~~~-------------- 107 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEY-------------------DPDTEVLVTVGATEAIAAAVLGLVE-------------- 107 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEeCCcHHHHHHHHHHhcC--------------
Confidence 4567777888889988888863 222 588999999998776653321
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC---CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK---LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~---g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav- 311 (375)
++..|++....|.++..++.+.+.+++.++.+++ +.+|+++|++++.+. +.+|+.+.++++||.+
T Consensus 108 -----~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~ 176 (387)
T PRK07777 108 -----PGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVL 176 (387)
T ss_pred -----CCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccC
Confidence 2346888889998888888888888888988653 579999999988542 3467777888999987
Q ss_pred --ccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCCCcccEEEEcCcccCCCC
Q psy1596 312 --DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++++|+++|+++++++++|.+|+....-...+.. .+.+....+.+..+++|.++.|
T Consensus 177 ~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (387)
T PRK07777 177 TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVT 237 (387)
T ss_pred CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCc
Confidence 56999999999999999999999764321110000 1122233467889999998755
No 102
>PLN02368 alanine transaminase
Probab=99.38 E-value=1.4e-11 Score=124.98 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=115.5
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++++.+|+.+..|++. ++...++|+|++++...++.+...
T Consensus 107 ~G~~~LR~aia~~~~~~~g~~~-------------------~~~~I~it~Ga~~al~~~~~~l~~--------------- 152 (407)
T PLN02368 107 RGLPGVRKEVAEFIERRDGYPS-------------------DPELIFLTDGASKGVMQILNAVIR--------------- 152 (407)
T ss_pred CCCHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEcccHHHHHHHHHHHHcC---------------
Confidence 3556777888999988888763 334689999999998777765431
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
.++..|++.+.++..+...+.+.|.+++.||+++ ++.+|+++|++++++...++..+.+++.+.++|+||.+
T Consensus 153 ---~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~ 229 (407)
T PLN02368 153 ---GEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSE 229 (407)
T ss_pred ---CCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCH
Confidence 0345788999999999999988888999999864 47899999999997643333345678888899999998
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+.+++|+++|++||+||++|.+|+-..
T Consensus 230 e~l~~l~~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 230 ANLREILKFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccc
Confidence 668888899999999999999998754
No 103
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.37 E-value=1.3e-11 Score=126.44 Aligned_cols=146 Identities=10% Similarity=0.054 Sum_probs=111.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..+++++|+.|+..++.+... ++.
T Consensus 72 ~~le~~la~l~g~~-----------------------~~v~fsSG~~Ai~~al~~ll~-------------------~Gd 109 (437)
T PRK05613 72 EALENRIASLEGGV-----------------------HAVAFASGQAAETAAILNLAG-------------------AGD 109 (437)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence 77888899998765 368888888888776654311 345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+..... ...|.+++.++ +. .|+++|+++|++.+ .+|+....++++|.+-||++|++
T Consensus 110 ~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~---~d~e~l~~~l~~~t------k~V~~e~~~Np~~~v~di~~I~~ 179 (437)
T PRK05613 110 HIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-NP---DDPESWQAAVQPNT------KAFFGETFANPQADVLDIPAVAE 179 (437)
T ss_pred EEEECCCccHHHHHHHHHHHHhcCeEEEEEC-CC---CCHHHHHHhCCccC------eEEEEECCCCCCCcccCHHHHHH
Confidence 7899999999885433 23567888887 32 28999999987643 36667778889999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+|+++|+.++||++++.+....|. -.| ||.+++++|||++.+
T Consensus 180 la~~~gi~livD~t~a~g~~~~p~----~~G---aDivv~S~~K~l~G~ 221 (437)
T PRK05613 180 VAHRNQVPLIVDNTIATAALVRPL----ELG---ADVVVASLTKFYTGN 221 (437)
T ss_pred HHHHcCCeEEEECCCccccccChH----HhC---CCEEEeeccceecCC
Confidence 999999999999999887654332 224 699999999998654
No 104
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.37 E-value=1.4e-11 Score=123.08 Aligned_cols=146 Identities=14% Similarity=0.100 Sum_probs=114.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..+++++|++|+..++.+... ++.
T Consensus 43 ~~le~~la~l~g~~-----------------------~a~~~~sG~~Ai~~~l~~l~~-------------------~gd 80 (369)
T cd00614 43 DALEKKLAALEGGE-----------------------AALAFSSGMAAISTVLLALLK-------------------AGD 80 (369)
T ss_pred HHHHHHHHHHHCCC-----------------------CEEEEcCHHHHHHHHHHHHcC-------------------CCC
Confidence 77888899988865 368999999999998876532 245
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+....+ ...+.+++.++.+ |+++|++++++. +.+|+...+++++|.+.|+++|++
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~ 149 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-----DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAE 149 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHH
Confidence 7888988998776543 3456778888764 588999888542 457888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|++++||++|+.+....| .-. .+|.++.+++|+++.+-
T Consensus 150 la~~~g~~livD~t~~~~~~~~~----~~~---g~Divv~S~tK~l~g~~ 192 (369)
T cd00614 150 LAHEHGALLVVDNTFATPYLQRP----LEL---GADIVVHSATKYIGGHS 192 (369)
T ss_pred HHHHcCCEEEEECCCcchhcCCh----hhh---CCcEEEeccceeccCCC
Confidence 99999999999999988654222 111 36999999999998654
No 105
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.36 E-value=1.9e-11 Score=122.10 Aligned_cols=162 Identities=11% Similarity=0.045 Sum_probs=115.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++++++++|.+. ...++|+|+|+++..++.+... ++.
T Consensus 69 ~~lr~~ia~~l~~~~---------------------~~v~~~~g~t~al~~~~~~~~~-------------------~gd 108 (380)
T PRK06225 69 PELRELILKDLGLDD---------------------DEALITAGATESLYLVMRAFLS-------------------PGD 108 (380)
T ss_pred HHHHHHHHHhcCCCC---------------------CcEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence 667888889888762 3689999999998888765421 234
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEEL 317 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI 317 (375)
.|++++.++......+...|.+++.+|++. ++.+|+++|++++.+. +.+|+.+.++++||.+ +++++|
T Consensus 109 ~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~i 182 (380)
T PRK06225 109 NAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDEN------TRLIYLIDPLNPLGSSYTEEEIKEF 182 (380)
T ss_pred EEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCC------ceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 678888888887777777788899998742 4689999999988643 3367777888999986 679999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM 374 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l 374 (375)
+++|+++|+++++|++|+....-.+.... +. .....+..+++|+++.| .-+|.+
T Consensus 183 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~--~~~~i~~~s~SK~~g~~G~RiG~i 237 (380)
T PRK06225 183 AEIARDNDAFLLHDCTYRDFAREHTLAAE-YA--PEHTVTSYSFSKIFGMAGLRIGAV 237 (380)
T ss_pred HHHHHHCCcEEEEehhHHHHhccCCchhh-cC--CCCEEEEeechhhcCCccceeEEE
Confidence 99999999999999998643210010000 11 12244556888998644 235654
No 106
>PLN02656 tyrosine transaminase
Probab=99.36 E-value=2.4e-11 Score=122.95 Aligned_cols=138 Identities=8% Similarity=0.080 Sum_probs=109.9
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++.+.+|+.+..|.+. ++...++|+|+++++..++.+..+
T Consensus 73 ~G~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~--------------- 118 (409)
T PLN02656 73 VGLPQARRAIAEYLSRDLPYKL-------------------SLDDVFITSGCTQAIDVALSMLAR--------------- 118 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCCC-------------------CcccEEEeCChHHHHHHHHHHHhC---------------
Confidence 3556677888888888777653 345689999999998777765422
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|++++.+|..+...+.+.+.+++.+|++ +++.+|+++|++++++. +.+|+.+.++++||.+
T Consensus 119 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~s~ 188 (409)
T PLN02656 119 ----PGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGNVYSY 188 (409)
T ss_pred ----CCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCCCCCH
Confidence 34578899999988877777788899999984 35689999999988543 3467777899999998
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+++++|+++|+++++|+++|++|+...
T Consensus 189 ~~~~~i~~~a~~~~~~ii~De~y~~~~ 215 (409)
T PLN02656 189 QHLKKIAETAEKLKILVIADEVYGHLA 215 (409)
T ss_pred HHHHHHHHHHHHcCCEEEEehhhhhcc
Confidence 789999999999999999999998653
No 107
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.36 E-value=1.8e-11 Score=126.59 Aligned_cols=144 Identities=17% Similarity=0.101 Sum_probs=116.4
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++++.+|+.+..|++. ++...++|+|+++++..++.+...
T Consensus 115 ~G~~~LR~aia~~~~~~~g~~~-------------------~~~~I~it~Ga~~al~~~~~~l~~--------------- 160 (481)
T PTZ00377 115 AGYPFVRKAVAAFIERRDGVPK-------------------DPSDIFLTDGASSGIKLLLQLLIG--------------- 160 (481)
T ss_pred cCCHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEcCCHHHHHHHHHHHhcc---------------
Confidence 4667777888999988888774 345689999999998888765531
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN- 313 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp- 313 (375)
.+++.|++...++.++...+.+.|.+++.||+++ ++.+|+++|++++++..+++..+.+|+.+.++|+||.+-+
T Consensus 161 ---~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~ 237 (481)
T PTZ00377 161 ---DPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTR 237 (481)
T ss_pred ---CCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCH
Confidence 0345799999999999999988888999999863 4689999999999865444434656777789999999855
Q ss_pred --HHHHHHHHHhcCCEEEEecccccC
Q psy1596 314 --LEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 314 --l~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
+++|+++|++|++||++|.+|+-.
T Consensus 238 e~~~~i~~~a~~~~~~iI~De~Y~~l 263 (481)
T PTZ00377 238 DVMEEIIKFCYEKGIVLMADEVYQEN 263 (481)
T ss_pred HHHHHHHHHHHHCCCEEEEehhhHhh
Confidence 899999999999999999999864
No 108
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.36 E-value=1.3e-11 Score=125.99 Aligned_cols=177 Identities=12% Similarity=0.072 Sum_probs=121.2
Q ss_pred cccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHH
Q psy1596 143 VVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTE 222 (375)
Q Consensus 143 ~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~ 222 (375)
-+..+.|.||+.+ .++.+.+++++|.+ ..++|++||.|+.++..+..
T Consensus 68 ~vGDd~Yagd~s~--------~~LE~~vAe~lG~e-----------------------~aV~v~sGTaAl~ll~~l~v-- 114 (460)
T PRK13237 68 MIGDEAYAGSRNF--------YHLEETVQEYYGFK-----------------------HVVPTHQGRGAENLLSRIAI-- 114 (460)
T ss_pred hhcchhhcCCCcH--------HHHHHHHHHHHCCC-----------------------eEEEeCCHHHHHHHHHHhCC--
Confidence 3444567777666 77888888999987 27999999999887432110
Q ss_pred HHHHhhccCCcchhhhhcCceEEEecCCCchHHHHH-HHHcCCeEEEEec----------CCCCCcCHHHHHHHHHHhhh
Q psy1596 223 AIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKA-GLIGLVKMRYIES----------DDKLSLRGDKLIEAIERDKK 291 (375)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~----------d~~g~md~e~Le~aI~~~~~ 291 (375)
.++.+| +..+|.+-.++ ....|...+-+.. ...|.||+++|+++|++...
T Consensus 115 -----------------~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~ 175 (460)
T PRK13237 115 -----------------KPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA 175 (460)
T ss_pred -----------------CCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC
Confidence 123343 78888888888 4566655544431 24689999999999985422
Q ss_pred cCCccEEEEEEcCCCCcc-c---cccHHHHHHHHHhcCCEEEEecccccCcc-cc----hhhhhhh-----cC-CCcccE
Q psy1596 292 KHLIPFFVCGTLGTTGAC-A---FDNLEELGPICEKEGLWLHVDAAYAGSSF-IC----PEFRKWL-----AG-VEYANS 356 (375)
Q Consensus 292 ~g~~p~~Vv~t~GtT~tG-a---vDpl~eI~~ia~~~~iwlHVDaA~gg~~~-~~----~~~~~~~-----~g-ie~aDS 356 (375)
. .+.+|+++..++..| . .+++++|.++|++||+++|.|||+..+.. +. +.|+..- +. ...+|.
T Consensus 176 ~--~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~ 253 (460)
T PRK13237 176 E--NIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADG 253 (460)
T ss_pred C--ccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcE
Confidence 1 122455565566664 2 46899999999999999999999987643 22 2232211 11 246899
Q ss_pred EEEcCcccCCCCCccee
Q psy1596 357 IAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 357 i~~d~HK~l~~P~~~g~ 373 (375)
+++|+||.+.+|.|..+
T Consensus 254 ~t~S~~K~~~~~~GG~i 270 (460)
T PRK13237 254 CTMSGKKDCLVNIGGFL 270 (460)
T ss_pred EEEeCCCCCCCCCceEE
Confidence 99999999999985443
No 109
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.36 E-value=2.6e-11 Score=120.74 Aligned_cols=163 Identities=12% Similarity=-0.001 Sum_probs=118.6
Q ss_pred hhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596 155 VILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL 234 (375)
Q Consensus 155 ~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~ 234 (375)
...|...+++++.+++++++|.+ ..+++++|+++++.++.+..+
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~-----------------------~~i~~~sG~~a~~~a~~~~~~------------- 115 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTE-----------------------AALVFQSGFNTNQGVLSALLR------------- 115 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCC-----------------------cEEEECcHHHHHHHHHHHhCC-------------
Confidence 44567778899999999998865 136666778898877665422
Q ss_pred hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596 235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL 314 (375)
Q Consensus 235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl 314 (375)
++.+|++++..|.++..++.+.+.+++.++ .+|+++|++.+++... ..+.+|+.....+.+|.+.|+
T Consensus 116 ------~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~ 182 (385)
T TIGR01825 116 ------KGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPL 182 (385)
T ss_pred ------CCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCH
Confidence 345788999999999888887777666554 4799999998876432 124466666667889999999
Q ss_pred HHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCC-CcccEEEEcCcccCCCC
Q psy1596 315 EELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGV-EYANSIAFNPSKWLMVH 368 (375)
Q Consensus 315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gi-e~aDSi~~d~HK~l~~P 368 (375)
++|+++|++||+|+++|++|+.+.+-. +.... .++ ...|.+..++||+++.+
T Consensus 183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~ 238 (385)
T TIGR01825 183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH--FGLEDKVDIQVGTLSKAIGVV 238 (385)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh--cCCCcCCcEEEEeccHHhhcC
Confidence 999999999999999999997653310 00011 122 24688889999998754
No 110
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.36 E-value=1.4e-11 Score=125.26 Aligned_cols=164 Identities=12% Similarity=-0.025 Sum_probs=113.7
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
..++|+.+.+.+++++|.+. .-+++++||.||+.++.+...
T Consensus 72 ~~~lE~~~~~~la~l~g~~~----------------------alv~~~SG~~A~~~~l~al~~----------------- 112 (416)
T PRK13034 72 VDEVEALAIERAKQLFGCDY----------------------ANVQPHSGSQANGAVYLALLK----------------- 112 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCc----------------------eEEecCCcHHHHHHHHHHhcC-----------------
Confidence 33444444459999998761 124568999999988876522
Q ss_pred hcCceEEEecCCCchH-HHHHHHH--cCCeE--EEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 239 INSRLVAYCSDQAHSS-VEKAGLI--GLVKM--RYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 239 ~~~~~vV~~S~~aH~S-v~kaa~l--g~~~v--~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
++..|+++...|.+ +..+++. .+... +.++++ ..+.+|+++|++.++.. .|.+|+.+ .+.+|..-
T Consensus 113 --~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~klVi~~--~~~~g~~~ 183 (416)
T PRK13034 113 --PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH-----KPKLIIAG--FSAYPREL 183 (416)
T ss_pred --CCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc-----CCeEEEEC--CCcccccc
Confidence 45689999999988 3334432 22222 344443 35679999999998652 14455443 34567777
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
|+++|.++|+++|++++||+||+.+....+.+ ...+..+|.++.++|||+..|.|..+
T Consensus 184 dl~~l~~la~~~g~~livD~Aha~G~~~~g~~---~~~~~~~Di~~~s~~K~l~g~~GG~v 241 (416)
T PRK13034 184 DFARFREIADEVGALLMVDMAHIAGLVAAGEH---PNPFPHAHVVTTTTHKTLRGPRGGMI 241 (416)
T ss_pred CHHHHHHHHHHcCCEEEEeCcccccCcccCCC---CCCCCCceEEEEeCcccCCCCCCeEE
Confidence 99999999999999999999999987654321 12335689999999999988887544
No 111
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.35 E-value=2.8e-11 Score=120.97 Aligned_cols=156 Identities=16% Similarity=0.142 Sum_probs=125.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
++..+++++.+|.+ ..+.+++||.|+.+||++.- +.+++
T Consensus 37 ~~FE~~~ae~~G~k-----------------------~ava~~sgT~AL~laL~al~------------------ig~GD 75 (374)
T COG0399 37 RRFEQAFAEYLGVK-----------------------YAVAVSSGTAALHLALLALA------------------IGPGD 75 (374)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEecChHHHHHHHHHhcC------------------CCCCC
Confidence 77888999999987 36999999999999997532 12566
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
.|+++..+..+...+....|.+++.|.+| +.+.||++.||++|++.++ +|+.. ...|..-++++|.+||+
T Consensus 76 eVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tK------AIipV---hl~G~~~dm~~i~~la~ 146 (374)
T COG0399 76 EVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTK------AIIPV---HLAGQPCDMDAIMALAK 146 (374)
T ss_pred EEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCe------EEEEe---hhccCCCCHHHHHHHHH
Confidence 89999999999999999999999999998 4599999999999988643 55544 35677779999999999
Q ss_pred hcCCEEEEecccccCcccchhhhhhhc-CCCcccEEEEcCcccCCCCCcceee
Q psy1596 323 KEGLWLHVDAAYAGSSFICPEFRKWLA-GVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~-gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
+||++++.|+|++.++. |+.+.- .+..+-+++|-++|.+.+- ..|++
T Consensus 147 ~~~l~vIEDaAqa~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav 194 (374)
T COG0399 147 RHGLPVIEDAAQAHGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAV 194 (374)
T ss_pred HcCCeEEEEcchhccCe----ecCcccccccceEEEEecCCCCcccc-CceEE
Confidence 99999999999999874 333322 3556788999999976543 55554
No 112
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.35 E-value=2.7e-11 Score=119.04 Aligned_cols=163 Identities=14% Similarity=0.043 Sum_probs=116.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++.+++++|.+. ...++|+|+|+++..++.+... ++.
T Consensus 57 ~~lr~~ia~~~~~~~---------------------~~i~~~~G~~~~l~~~~~~l~~-------------------~gd 96 (346)
T TIGR01141 57 AELKQALADYYGVDP---------------------EQILLGNGSDEIIELLIRAFLE-------------------PGD 96 (346)
T ss_pred HHHHHHHHHHhCcCh---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence 467777888888651 3578999999987666554321 234
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++++.++..+...+...|.+++.+|.++++.+|+++|++++.+. +.+|+.+.++++||.+-+++++.++|+.
T Consensus 97 ~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~ 170 (346)
T TIGR01141 97 AVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLER 170 (346)
T ss_pred EEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 6888888877666667778889999999888999999999976432 3477788899999999999999999988
Q ss_pred c--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596 324 E--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM 374 (375)
Q Consensus 324 ~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l 374 (375)
+ ++++++|++|+..... +.........+ .+.+..+++|+++.| ..+|.+
T Consensus 171 ~~~~~~ii~D~~y~~~~~~-~~~~~~~~~~~-~~i~~~S~sK~~g~~G~r~G~~ 222 (346)
T TIGR01141 171 TPEDALVVVDEAYGEFSGE-PSTLPLLAEYP-NLIVLRTLSKAFGLAGLRIGYA 222 (346)
T ss_pred CCCCcEEEEECchhhhcCC-ccHHHHHhhCC-CEEEEehhhHhhhchhhhceee
Confidence 7 9999999999853211 01111122221 234567889998544 346655
No 113
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.35 E-value=2.5e-11 Score=122.39 Aligned_cols=147 Identities=14% Similarity=0.025 Sum_probs=113.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..++++||+.|+..++.+... ++.
T Consensus 56 ~~lE~~lA~l~g~~-----------------------~~l~~~sG~~Ai~~~l~~ll~-------------------~GD 93 (385)
T PRK08574 56 RPLEEALAKLEGGV-----------------------DALAFNSGMAAISTLFFSLLK-------------------AGD 93 (385)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence 77888899998865 358899999999888765421 345
Q ss_pred EEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
.|+++...|.+....+.. .+.+++.+. +|+++|+++|++. .+.+|+...+++++|.+-|+++|+++
T Consensus 94 ~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~------~d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~dl~~I~~l 162 (385)
T PRK08574 94 RVVLPMEAYGTTLRLLKSLEKFGVKVVLAY------PSTEDIIEAIKEG-----RTKLVFIETMTNPTLKVIDVPEVAKA 162 (385)
T ss_pred EEEEcCCCchhHHHHHHHhhccCcEEEEEC------CCHHHHHHhcCcc-----CceEEEEECCCCCCCEecCHHHHHHH
Confidence 788999999998877632 345555543 3688899888641 14477788899999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
|+++|+++++|++|+.+....| +.. .+|.++.++||+++.|-+
T Consensus 163 a~~~gi~livD~t~a~~~~~~~----l~~---GaDivv~S~sK~l~g~~d 205 (385)
T PRK08574 163 AKELGAILVVDNTFATPLLYRP----LRH---GADFVVHSLTKYIAGHND 205 (385)
T ss_pred HHHcCCEEEEECCCCccccCCh----hhh---CCcEEEeeCceeecCCCC
Confidence 9999999999999987754322 112 369999999999988765
No 114
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.35 E-value=8.5e-11 Score=118.77 Aligned_cols=196 Identities=11% Similarity=-0.016 Sum_probs=131.6
Q ss_pred cCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC
Q psy1596 121 YKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN 200 (375)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~ 200 (375)
|.+-.+.+.+...+.+.+..... ..+.+..+.+......++.+.+++++|.+
T Consensus 56 yl~l~~~p~v~~a~~~~~~~~~~-----~~~~s~~~~~~~~~~~~Le~~la~~~g~~----------------------- 107 (410)
T PRK13392 56 YLGMGQHPDVIGAMVDALDRYGA-----GAGGTRNISGTSHPHVLLERELADLHGKE----------------------- 107 (410)
T ss_pred ccCCCCCHHHHHHHHHHHHHcCC-----CCchhhhcccChHHHHHHHHHHHHHhCCC-----------------------
Confidence 44444445555555555544221 11223333444444478889999999865
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHH
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGD 280 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e 280 (375)
..++.++|++||..++...... .++.+|+++...|.|+..++.+.+.+++.++.+ |.+
T Consensus 108 ~~i~~~sG~~a~~~~i~~l~~~-----------------~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~ 165 (410)
T PRK13392 108 SALLFTSGYVSNDAALSTLGKL-----------------LPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLA 165 (410)
T ss_pred CEEEECcHHHHHHHHHHHHhcC-----------------CCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHH
Confidence 2577788899998887643210 123478888889999998888888887777643 667
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcC-CCcccEE
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAG-VEYANSI 357 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~g-ie~aDSi 357 (375)
.|++.+++... ..+.+|+.+.+++++|.+-|+++|.++|+++|+++++|+||+.+.+ .+..+.. ..+ .+..|.+
T Consensus 166 ~l~~~l~~~~~--~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~~g~g~~~~~~~~~~~div 242 (410)
T PRK13392 166 DLEEQLASVDP--DRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY-GARGGGIAERDGLMDRIDMI 242 (410)
T ss_pred HHHHHHHhccC--CCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-CCCCCchhhhccCCCCCcEE
Confidence 78887765321 1355788899999999999999999999999999999999995432 1111110 112 2456888
Q ss_pred EEcCcccCCCCC
Q psy1596 358 AFNPSKWLMVHF 369 (375)
Q Consensus 358 ~~d~HK~l~~P~ 369 (375)
+.+++|+++.+-
T Consensus 243 ~~tlsK~~g~~G 254 (410)
T PRK13392 243 QGTLAKAFGCLG 254 (410)
T ss_pred EEEChHhhhccc
Confidence 889999887653
No 115
>PRK07682 hypothetical protein; Validated
Probab=99.34 E-value=3e-11 Score=120.47 Aligned_cols=167 Identities=15% Similarity=0.100 Sum_probs=123.2
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++++.+|+.+.+|.+. ++ ...++|+|+++++..++.+..+
T Consensus 57 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~~i~~t~G~~~al~~~~~~l~~-------------- 103 (378)
T PRK07682 57 AGLLELRQEIAKYLKKRFAVSY-------------------DPNDEIIVTVGASQALDVAMRAIIN-------------- 103 (378)
T ss_pred CCcHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEeCChHHHHHHHHHHhCC--------------
Confidence 4667788899999999888763 22 3589999999998877654422
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
++..|++++.+|..+...+...+.+++.++.+ +++.+|+++|++++.+. +.+|+.+.++++||.+
T Consensus 104 -----~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s 172 (378)
T PRK07682 104 -----PGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLN 172 (378)
T ss_pred -----CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcC
Confidence 34578899999998888887777888888874 46789999999988642 3466677899999987
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+.+++|+++|++|++++++|.+|+....-.+ .... +.+...-..+.-++.|.++.|
T Consensus 173 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~ 231 (378)
T PRK07682 173 KSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFAS-IKGMRERTILISGFSKGFAMT 231 (378)
T ss_pred HHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhh-cccccCCEEEEecCcccccCh
Confidence 4699999999999999999999987542110 0111 112212246677889998754
No 116
>PLN00175 aminotransferase family protein; Provisional
Probab=99.34 E-value=6.2e-11 Score=120.29 Aligned_cols=167 Identities=13% Similarity=0.113 Sum_probs=123.0
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|..++++.+.+|+.+..|++. ++. ..++|+|+++++..++.+..+
T Consensus 91 ~G~~~Lr~aia~~~~~~~g~~~-------------------~~~~~I~vt~G~~~al~~~~~~l~~-------------- 137 (413)
T PLN00175 91 FGVPELNSAIAERFKKDTGLVV-------------------DPEKEVTVTSGCTEAIAATILGLIN-------------- 137 (413)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCCEEEeCCHHHHHHHHHHHhCC--------------
Confidence 3667778889999998888763 222 578999999998776654321
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|++.+..|..+...++..|.+++.|+.+ +++.+|+++|++++... +.+|+.+.++++||.+
T Consensus 138 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~------~k~i~i~~p~NPtG~~~s~ 206 (413)
T PLN00175 138 -----PGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSK------TRAILINTPHNPTGKMFTR 206 (413)
T ss_pred -----CCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcC------ceEEEecCCCCCCCcCCCH
Confidence 34578889999999988888888999999986 45789999999998643 3367778899999998
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCCCcccEEEEcCcccCCCC
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gie~aDSi~~d~HK~l~~P 368 (375)
+.+++|+++|++|++|+++|.+|..... .+.... .+.+...-..+..++.|.++.|
T Consensus 207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~-~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 207 EELELIASLCKENDVLAFTDEVYDKLAF-EGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred HHHHHHHHHHHHcCcEEEEecccCcccc-CCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 5688899999999999999999987542 111100 0112111234557889988644
No 117
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.34 E-value=2.3e-11 Score=129.92 Aligned_cols=165 Identities=12% Similarity=0.111 Sum_probs=128.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.+..+..|++||.+ . .-.+|.|.|.+|..++.++.. ++.
T Consensus 198 ~eAe~~aA~~fgAd---------~-------------tyfvvNGTS~~n~av~~a~~~-------------------~Gd 236 (713)
T PRK15399 198 LEAEEYIARTFGAE---------Q-------------SYIVTNGTSTSNKIVGMYAAP-------------------AGS 236 (713)
T ss_pred HHHHHHHHHHhCCC---------c-------------EEEEeCChHHHHHHHHHHhcC-------------------CCC
Confidence 67888999999987 2 236677778889888877643 456
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCC--C---CCcCH-----HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD--K---LSLRG-----DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~---g~md~-----e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
.|+++..+|-|+..++.+.|..++.+++.. . |.+++ +.++++|++.... ..|..+++|.+ |..|.+-+
T Consensus 237 ~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd 314 (713)
T PRK15399 237 TLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYN 314 (713)
T ss_pred EEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeC
Confidence 899999999999999999999999887642 2 34555 9999999876432 35788999987 88999999
Q ss_pred HHHHHHHHHhcCCEE-EEecccccCcccchhhhhh--hcCCCcccEE---EEcCcccCCCCCcceee
Q psy1596 314 LEELGPICEKEGLWL-HVDAAYAGSSFICPEFRKW--LAGVEYANSI---AFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 314 l~eI~~ia~~~~iwl-HVDaA~gg~~~~~~~~~~~--~~gie~aDSi---~~d~HK~l~~P~~~g~l 374 (375)
+++|+++| |+.+ |||.|||+...|.|.++.. +.+...+|.+ +-|.||.|.+-..++++
T Consensus 315 ~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~i 378 (713)
T PRK15399 315 TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLI 378 (713)
T ss_pred HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheee
Confidence 99999999 6665 8999999998888765422 2222247888 99999999877766654
No 118
>PRK08960 hypothetical protein; Provisional
Probab=99.34 E-value=2.7e-11 Score=121.37 Aligned_cols=165 Identities=12% Similarity=0.027 Sum_probs=119.6
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++.+.+|+.+..|++. ++...++|+|+++++..++.+...
T Consensus 69 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~it~G~~~al~~~~~~~~~--------------- 114 (387)
T PRK08960 69 RGLPALREAIAGFYAQRYGVDV-------------------DPERILVTPGGSGALLLASSLLVD--------------- 114 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------ChhhEEEccCcHHHHHHHHHHhcC---------------
Confidence 4667777888888888878763 345689999999998776654321
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-- 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-- 312 (375)
++..|++++.+|.+....+...+.+++.||+++ ++.+|+++|++++++. ..+|+.+.++++||.+-
T Consensus 115 ----~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~~ 184 (387)
T PRK08960 115 ----PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNAD------TVGALVASPANPTGTLLSR 184 (387)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCcc------ceEEEEECCCCCCCcCcCH
Confidence 345789999999999998887788899999864 3579999999988653 23667777999999974
Q ss_pred -cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 313 -NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
.+++|+++|+++|+|+++|.+|..... ...... +..+..--.+.-+++|.++.
T Consensus 185 ~~~~~l~~~~~~~~~~li~De~Y~~~~~-~~~~~~-~~~~~~~vi~~~S~SK~~g~ 238 (387)
T PRK08960 185 DELAALSQALRARGGHLVVDEIYHGLTY-GVDAAS-VLEVDDDAFVLNSFSKYFGM 238 (387)
T ss_pred HHHHHHHHHHHHcCCEEEEEcccccccc-CCCCCC-hhhccCCEEEEeecccccCC
Confidence 567788889999999999999976432 111111 11221112456789998753
No 119
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.33 E-value=2.5e-11 Score=122.08 Aligned_cols=147 Identities=12% Similarity=0.071 Sum_probs=111.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.|+++.|.+ ..++++||++|+..++.+... ++.
T Consensus 53 ~~lE~~lA~l~g~~-----------------------~~~~~~sG~~Ai~~al~all~-------------------~GD 90 (377)
T TIGR01324 53 FALQDAMCELEGGA-----------------------GCYLYPSGLAAVTNSILAFVK-------------------AGD 90 (377)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECcHHHHHHHHHHHhcC-------------------CCC
Confidence 66778888887755 378999999999988865421 345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..+.+....+ ...+.+++.++.+ +.++|+++|++. +.+|+.+.+++++|.+.||++|++
T Consensus 91 ~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~-----~~e~l~~~i~~~------tklV~lesp~Np~g~~~dl~~I~~ 159 (377)
T TIGR01324 91 HVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL-----IGEDIATLIQPN------TKVLFLEAPSSITFEIQDIPAIAK 159 (377)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCcHHHHHHHHH
Confidence 7888888886665533 2345666666432 237788887643 448899999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|+|++||++|+.+...-| ... .+|.+..+.|||++.+-+
T Consensus 160 la~~~g~~livD~t~a~g~~~~p----l~~---gaDivv~S~tK~l~G~~d 203 (377)
T TIGR01324 160 AARNPGIVIMIDNTWAAGLLFKP----LEH---GVDISIQAGTKYLVGHSD 203 (377)
T ss_pred HHHHcCCEEEEECCCccccccCc----ccc---CceEEEecCceeccCCCC
Confidence 99999999999999998865432 112 469999999999988765
No 120
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.33 E-value=3e-11 Score=121.97 Aligned_cols=147 Identities=11% Similarity=0.027 Sum_probs=112.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..+++++|+.|+..++.+... ++.
T Consensus 62 ~~le~~lA~l~g~~-----------------------~av~~~sG~~Ai~~~l~al~~-------------------~Gd 99 (391)
T TIGR01328 62 SNLEGRIAFLEGTE-----------------------AAVATSSGMGAIAATLLTILK-------------------AGD 99 (391)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence 67888899999876 268999999998877655421 244
Q ss_pred EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+.... +...|.+++.++.+ |+++++++|.+. +.+|+...+++++|.+-|+++|++
T Consensus 100 ~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~-----d~e~l~~~i~~~------tklV~le~p~Np~G~v~dl~~I~~ 168 (391)
T TIGR01328 100 HLISDECLYGCTFALLEHALTKFGIQVDFINMA-----IPEEVKAHIKDN------TKIVYFETPANPTMKLIDMERVCR 168 (391)
T ss_pred EEEEecCcchHHHHHHHHHHhcCCeEEEEECCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHH
Confidence 688888877544333 33456778877764 789999988653 347888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|++++||+||+.+....| .. ..+|.++.+++|+++.+-+
T Consensus 169 la~~~gi~livD~a~a~~~~~~~----~~---~g~Divv~S~sK~lgg~g~ 212 (391)
T TIGR01328 169 DAHSQGVKVIVDNTFATPMLTNP----VA---LGVDVVVHSATKYIGGHGD 212 (391)
T ss_pred HHHHcCCEEEEECCCchhccCCc----hh---cCCCEEEccccccccCCCC
Confidence 99999999999999987543211 11 2479999999999987765
No 121
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.33 E-value=5.1e-11 Score=117.82 Aligned_cols=169 Identities=15% Similarity=0.113 Sum_probs=121.5
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|..++++++.+|+.+..|++. ++. ..++|+|++++...++.+..+. +
T Consensus 36 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~Iiit~Gs~~ai~~~~~~~~~~----------g-- 84 (350)
T TIGR03537 36 LGTKALREAISGWFERRFGVKL-------------------DPDAQVLPSAGSKEAIFHFPLVFIDP----------E-- 84 (350)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEcCChHHHHHHHHHHHcCC----------C--
Confidence 4566777889999988888763 333 6899999999987766544220 0
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-C-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-D-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
.++..|+++..++..+..++...|.+++.||.+ + ++.+|+++|++++.+. +.+|+++.++++||.+-+
T Consensus 85 ----~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~ 154 (350)
T TIGR03537 85 ----EDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEE------TKIVWINYPHNPTGATAP 154 (350)
T ss_pred ----CCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhc------cEEEEEeCCCCCcCcccC
Confidence 012478899999999999999889999999986 3 4568999999998753 346777789999998755
Q ss_pred ---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc-cEEEEcCcccCCCC
Q psy1596 314 ---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA-NSIAFNPSKWLMVH 368 (375)
Q Consensus 314 ---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a-DSi~~d~HK~l~~P 368 (375)
+++|+++|+++|+++++|.+|+-...-.+.. . ......- .-+..+++|.++.|
T Consensus 155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~-~-~~~~~~~~~i~~~s~SK~~g~~ 211 (350)
T TIGR03537 155 RSYLKETIAMCREHGIILCSDECYTEIYFGEPPH-S-ALEVGIENVLAFHSLSKRSGMT 211 (350)
T ss_pred HHHHHHHHHHHHHcCcEEEEeccccccccCCCCC-c-hhhcCcCCEEEEeecccccCCc
Confidence 8999999999999999999998542211100 0 0111111 23444899987654
No 122
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.33 E-value=1.8e-11 Score=130.74 Aligned_cols=164 Identities=10% Similarity=0.098 Sum_probs=127.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.+..+..|++||.+ . .-.+|.|.|.+|..++.++.. ++.
T Consensus 198 ~eAe~~AA~~fgAd---------~-------------tyfvvNGTS~~n~av~~a~~~-------------------~Gd 236 (714)
T PRK15400 198 KEAEEYIARVFNAD---------R-------------SYMVTNGTSTANKIVGMYSAP-------------------AGS 236 (714)
T ss_pred HHHHHHHHHHhCCC---------c-------------EEEEeCchHHHHHHHHHHhcC-------------------CCC
Confidence 67889999999987 2 235667778888888776543 356
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCC--C---CCcC-----HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD--K---LSLR-----GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~---g~md-----~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
.|+++..+|-|+..|+.+.|..++.++++. . |.++ ++.++++|++.... ..|+.+++|.+ |..|.+-+
T Consensus 237 ~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~p-TYdG~~yd 314 (714)
T PRK15400 237 TVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLYN 314 (714)
T ss_pred EEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECC-CCccEecC
Confidence 899999999999999999999999987642 2 2345 89999999875432 35778888887 88999999
Q ss_pred HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC-Ccc---c--EEEEcCcccCCCCCccee
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV-EYA---N--SIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi-e~a---D--Si~~d~HK~l~~P~~~g~ 373 (375)
+++|+++|+.++ +|||.|||+...|.|.++.. .++ ..+ | .++-|.||.|.+-..+++
T Consensus 315 ~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~-sam~~ga~~~~~i~vtQStHKtL~alTQaS~ 377 (714)
T PRK15400 315 TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASM 377 (714)
T ss_pred HHHHHHHhCCCC--EEEEccchhhhccCcccCCc-ChhhcCCCCCCceEEEEchhhcccchhHHhH
Confidence 999999999887 79999999998888876421 122 234 5 899999999876555544
No 123
>PRK07337 aminotransferase; Validated
Probab=99.33 E-value=3.3e-11 Score=120.67 Aligned_cols=165 Identities=15% Similarity=0.078 Sum_probs=120.1
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..|.+. ++...++|+|++++...++.+..+
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~--------------- 112 (388)
T PRK07337 67 LGLAPLREAIAAWYARRFGLDV-------------------APERIVVTAGASAALLLACLALVE--------------- 112 (388)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------ChHhEEEecCcHHHHHHHHHHhcC---------------
Confidence 4567777888899988888763 334588999999997766654321
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|++++.+|.+....+...+.+++.+|.++ ++.+|+++|++.+.+. +.+|+.+.++++||.+
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~ 182 (388)
T PRK07337 113 ----RGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGER------TRGVLLASPSNPTGTSIAP 182 (388)
T ss_pred ----CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCcc------ceEEEEECCCCCCCcCcCH
Confidence 345799999999999888877778899999863 5789999999988643 3366778899999997
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEE-EcCcccCCCC
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIA-FNPSKWLMVH 368 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~-~d~HK~l~~P 368 (375)
+++++|+++|+++++|+++|.+|..... .+...... .+ ..+.|+ .+++|.++.|
T Consensus 183 ~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~-~~-~~~vi~~~S~SK~~~~~ 237 (388)
T PRK07337 183 DELRRIVEAVRARGGFTIVDEIYQGLSY-DAAPVSAL-SL-GDDVITINSFSKYFNMT 237 (388)
T ss_pred HHHHHHHHHHHHCCCEEEEecccccccc-CCCCcChh-hc-cCCEEEEEechhhcCCc
Confidence 4588899999999999999999986432 11100111 11 124554 4899988544
No 124
>PLN02187 rooty/superroot1
Probab=99.32 E-value=6.1e-11 Score=122.26 Aligned_cols=138 Identities=9% Similarity=0.080 Sum_probs=110.7
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+.+|++. ++...++|+|+++++..++.+..+
T Consensus 108 ~G~~~lR~aiA~~~~~~~~~~~-------------------~~~~I~it~G~~~al~~~~~~l~~--------------- 153 (462)
T PLN02187 108 AGILPARRAVADYMNRDLPHKL-------------------TPEDIFLTAGCNQGIEIVFESLAR--------------- 153 (462)
T ss_pred CChHHHHHHHHHHHHHhcCCCC-------------------CcccEEEeCCHHHHHHHHHHHhcC---------------
Confidence 4566777888888888777663 445689999999998887765432
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|++++.++..+...+...|.+++.++.. +++.+|+++|++++++. +.+|+.+.++++||.+
T Consensus 154 ----pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~v~s~ 223 (462)
T PLN02187 154 ----PNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGNVYSH 223 (462)
T ss_pred ----CCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCCccCH
Confidence 34578899999988888888888899999873 56889999999887543 3477888899999998
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+.+++|+++|+++|+||++|.+|+-..
T Consensus 224 e~l~~i~~~a~~~~i~iI~DE~Y~~l~ 250 (462)
T PLN02187 224 DHLKKVAETARKLGIMVISDEVYDRTI 250 (462)
T ss_pred HHHHHHHHHHHHCCCEEEEeccccccc
Confidence 458899999999999999999998743
No 125
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.32 E-value=5.4e-11 Score=119.55 Aligned_cols=172 Identities=14% Similarity=0.045 Sum_probs=122.6
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..|++.+ .....++|+|+|+++..++.+...
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~------------------~~~~i~it~G~~~al~~~~~~~~~--------------- 113 (391)
T PRK07309 67 AGLLELRQAAADFVKEKYNLDYA------------------PENEILVTIGATEALSASLTAILE--------------- 113 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCC------------------CCCcEEEeCChHHHHHHHHHHhcC---------------
Confidence 35667778888898887787521 124689999999998887665421
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D 312 (375)
++..|++...+|..+...++..|.+++.+|.++ ++.+|+++|++++++..+ .+.+|+.+.++|+||.+ +
T Consensus 114 ----~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~---~~~~i~l~~P~NPtG~~~s~~ 186 (391)
T PRK07309 114 ----PGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGD---KLKAVILNYPANPTGVTYSRE 186 (391)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCC---CeEEEEEECCCCCCCcCcCHH
Confidence 244688888999988888888888999999865 467999999999875321 24577778889999986 5
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
++++|+++|++||+++++|++|+....-.+.......-...--.+.-+++|.++.|
T Consensus 187 ~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 242 (391)
T PRK07309 187 QIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMT 242 (391)
T ss_pred HHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCc
Confidence 69999999999999999999998654211100000000111125667899987655
No 126
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.32 E-value=4.7e-11 Score=120.57 Aligned_cols=147 Identities=12% Similarity=0.086 Sum_probs=113.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.|+++.|.+ ..++|+||++|+..++.+... ++.
T Consensus 56 ~~Le~~lA~leg~e-----------------------~ivvt~gg~~Ai~~~l~all~-------------------~Gd 93 (388)
T PRK08861 56 GLLEQTLSELESGK-----------------------GAVVTNCGTSALNLWVSALLG-------------------PDD 93 (388)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHHcC-------------------CCC
Confidence 67888899988754 479999999999888765421 345
Q ss_pred EEEecCCCchHHHHHH-H---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG-L---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa-~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++..+|.+..+.+ . ..+.+++.++. .|++++++++++. +.+|+++.+++++|.+-|+++|++
T Consensus 94 ~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-----~d~e~l~~~i~~~------tklV~lesP~NPtG~v~dl~~I~~ 162 (388)
T PRK08861 94 LIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-----SDAAALDAALAKK------PKLILLETPSNPLVRVVDIAELCQ 162 (388)
T ss_pred EEEEcCCchHHHHHHHHHHHhcCCeEEEEECC-----CCHHHHHHhcCcC------CeEEEEECCCCCCCcccCHHHHHH
Confidence 7888888887665543 2 23456666642 5889999888653 448888899999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|++++||.+|+.+....| .-. .||.++.++|||++.|-+
T Consensus 163 la~~~gi~vIvDea~~~~~~~~p----l~~---GaDivv~S~tK~l~G~~d 206 (388)
T PRK08861 163 KAKAVGALVAVDNTFLTPVLQKP----LEL---GADFVIHSTTKYINGHSD 206 (388)
T ss_pred HHHHcCCEEEEECCccccccCCC----ccc---CCCEEEeecceeccCCCc
Confidence 99999999999999987654322 111 479999999999998876
No 127
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.32 E-value=1.7e-10 Score=118.71 Aligned_cols=197 Identities=14% Similarity=0.033 Sum_probs=140.7
Q ss_pred hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596 128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT 207 (375)
Q Consensus 128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG 207 (375)
+++.....+.+++-. ...+.+..+.|+..+++++.+.|++++|.+ ..++.++
T Consensus 119 p~v~~a~~~ai~~yG-----~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e-----------------------~all~sS 170 (476)
T PLN02955 119 PTISNAAANAAKEYG-----MGPKGSALICGYTTYHRLLESSLADLKKKE-----------------------DCLVCPT 170 (476)
T ss_pred HHHHHHHHHHHHHcC-----CCCCCcCccccChHHHHHHHHHHHHHHCCC-----------------------cEEEECC
Confidence 455666666665543 244567788999999999999999999987 2589999
Q ss_pred hHHHHHHHHHHHHHHH--HHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc----CCeEEEEecCCCCCcCHHH
Q psy1596 208 ASESTLICLLAGRTEA--IRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG----LVKMRYIESDDKLSLRGDK 281 (375)
Q Consensus 208 GT~Anl~AL~aar~~~--~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg----~~~v~~Vp~d~~g~md~e~ 281 (375)
|..||+.++.+..... ..... .+ ...++..|++.+..|.|+..++++. +.+++.++.+ |+++
T Consensus 171 Gy~AN~~~i~aL~~~~~~~~~~~--~~-----~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~ 238 (476)
T PLN02955 171 GFAANMAAMVAIGSVASLLAASG--KP-----LKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYH 238 (476)
T ss_pred hHHHHHHHHHHHhhccccccccc--cc-----cCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHH
Confidence 9999998886642100 00000 00 0013457899999999999999886 4677777765 8999
Q ss_pred HHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcCC-CcccEEE
Q psy1596 282 LIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAGV-EYANSIA 358 (375)
Q Consensus 282 Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gi-e~aDSi~ 358 (375)
|++++++...+ ..+||...-.++.|.+-|+++|.++|++||++|+||.||+.+.+ -+.-+.. ..|+ ...|.++
T Consensus 239 Le~~L~~~~~~---~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~-G~~G~G~~e~~g~~~di~ii~ 314 (476)
T PLN02955 239 LNSLLSSCKMK---RKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVC-GENGGGVAEEFNCEADVDLCV 314 (476)
T ss_pred HHHHHHhCCCC---ceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCcee-cCCCCcHHHHhCCCCCCcEEE
Confidence 99999875432 33555555577889999999999999999999999999998754 2211111 1122 3579999
Q ss_pred EcCcccCCCC
Q psy1596 359 FNPSKWLMVH 368 (375)
Q Consensus 359 ~d~HK~l~~P 368 (375)
.++-|.++..
T Consensus 315 ~TLsKA~G~~ 324 (476)
T PLN02955 315 GTLSKAAGCH 324 (476)
T ss_pred EeCccchhcc
Confidence 9999987643
No 128
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.32 E-value=6.5e-11 Score=117.05 Aligned_cols=156 Identities=15% Similarity=0.066 Sum_probs=109.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE-eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf-tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
.++++.+++++|.+. ...++ |+|+++++..++.+... ++
T Consensus 72 ~~lr~~ia~~~~~~~---------------------~~i~~~~~Ga~~~i~~~~~~~~~-------------------~g 111 (361)
T PRK00950 72 PELREALSKYTGVPV---------------------ENIIVGGDGMDEVIDTLMRTFID-------------------PG 111 (361)
T ss_pred HHHHHHHHHHhCCCH---------------------HHEEEeCCCHHHHHHHHHHHhcC-------------------CC
Confidence 566777788888762 24567 45666665555443211 23
Q ss_pred eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
..|++++.++..+...++..|.+++.+|.++++.+|+++|+++++.. +.+|+.+.++++||.+-++++|.++|+
T Consensus 112 d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~ 185 (361)
T PRK00950 112 DEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILE 185 (361)
T ss_pred CEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence 46888888777777777778889999998888899999999988542 336777789999999999999999999
Q ss_pred hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
++|+++++|++|+... ...........+. -.+.-++.|.++.|
T Consensus 186 ~~~~~li~De~y~~~~--~~~~~~~~~~~~~-vi~~~S~SK~~g~~ 228 (361)
T PRK00950 186 STDALVFVDEAYVEFA--EYDYTPLALEYDN-LIIGRTFSKVFGLA 228 (361)
T ss_pred HCCcEEEEECchhhhC--ccchHHHHHhcCC-EEEEEeehHhhcCc
Confidence 9999999999997643 1112222222111 12345888987654
No 129
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.31 E-value=2.4e-11 Score=129.88 Aligned_cols=168 Identities=14% Similarity=0.032 Sum_probs=127.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.+..+..+++||.+ . .-.+|.|.|.+|..++.++.. ++.
T Consensus 177 ~eAq~~AA~~fgAd---------~-------------tyFlvNGTS~gn~a~i~a~~~-------------------~Gd 215 (720)
T PRK13578 177 KDAQKHAAKVFNAD---------K-------------TYFVLNGTSASNKVVTNALLT-------------------PGD 215 (720)
T ss_pred HHHHHHHHHHhCCC---------c-------------eEEEeCChhHHHHHHHHHhcC-------------------CCC
Confidence 68899999999987 2 236677778888888877653 356
Q ss_pred EEEecCCCchHHHHH-HHHcCCeEEEEecC--CC---CCcCHHH-----HHHHHHHh-h--hcCCcc-EEEEEEcCCCCc
Q psy1596 244 VAYCSDQAHSSVEKA-GLIGLVKMRYIESD--DK---LSLRGDK-----LIEAIERD-K--KKHLIP-FFVCGTLGTTGA 308 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~d--~~---g~md~e~-----Le~aI~~~-~--~~g~~p-~~Vv~t~GtT~t 308 (375)
.|++...+|-|+..+ +.+.|..++.++++ +. |.++++. |+++|++. . ++...| .++++|.+ |..
T Consensus 216 ~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYd 294 (720)
T PRK13578 216 LVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYD 294 (720)
T ss_pred EEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCc
Confidence 899999999999996 68899999988764 22 3456544 99999875 1 122345 57788876 788
Q ss_pred cccccHHHHHHH-HHhcCCEEEEecccccCcccchhhhhhhc-CC-Cccc----EEEEcCcccCCCCCcceee
Q psy1596 309 CAFDNLEELGPI-CEKEGLWLHVDAAYAGSSFICPEFRKWLA-GV-EYAN----SIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 309 GavDpl~eI~~i-a~~~~iwlHVDaA~gg~~~~~~~~~~~~~-gi-e~aD----Si~~d~HK~l~~P~~~g~l 374 (375)
|.+-++++|+++ ++.++ .||||.|||+...|.|.|+.+-. .+ ..+| .++-|.||.|.+=..++++
T Consensus 295 G~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~L 366 (720)
T PRK13578 295 GTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQI 366 (720)
T ss_pred ceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhh
Confidence 999999999998 68888 99999999999988886544211 12 3589 9999999998765555543
No 130
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.31 E-value=5.4e-11 Score=119.80 Aligned_cols=138 Identities=9% Similarity=0.066 Sum_probs=110.7
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++.+.+|+.+..|++. ++ ...++|+|++++...++.+..+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~I~it~G~~~al~~~~~~~~~-------------- 115 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVIL-------------------NADKEVLLLMGSQDGLVHLPMVYAN-------------- 115 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCC-------------------CCCCeEEECCCcHHHHHHHHHHhCC--------------
Confidence 5777788899999998888763 33 4688899999987776654322
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
++..|++++.++..+...+...|.+++.||++++ +.+|+++|++++... +.+|+.+.++++||.+-+
T Consensus 116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~~~s 184 (399)
T PRK07681 116 -----PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADK------AKMMILNFPGNPVPAMAH 184 (399)
T ss_pred -----CCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCcCcCCC
Confidence 3457899999999998888888899999998743 578999999888542 347778888999999854
Q ss_pred ---HHHHHHHHHhcCCEEEEecccccCc
Q psy1596 314 ---LEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 314 ---l~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+++|+++|+++|+||++|.+|+...
T Consensus 185 ~~~~~~i~~~a~~~~~~iI~De~y~~~~ 212 (399)
T PRK07681 185 EDFFKEVIAFAKKHNIIVVHDFAYAEFY 212 (399)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhhe
Confidence 8889999999999999999998653
No 131
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.31 E-value=4.3e-11 Score=121.83 Aligned_cols=145 Identities=12% Similarity=0.096 Sum_probs=111.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..+++++|+.|+..++.+... ++.
T Consensus 60 ~~le~~lA~l~g~~-----------------------~~v~~~sG~~Ai~~al~~l~~-------------------~Gd 97 (418)
T TIGR01326 60 DVLEQRIAALEGGV-----------------------AALAVASGQAAITYAILNLAQ-------------------AGD 97 (418)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEEccHHHHHHHHHHHHhC-------------------CCC
Confidence 67888899998865 369999999999888876532 234
Q ss_pred EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+... .+...|.+++.++.+ |+++|+++|++. +.+|++..+++++|.+-|+++|++
T Consensus 98 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~------t~~V~le~p~NPtg~v~dl~~I~~ 166 (418)
T TIGR01326 98 NIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD-----DPEEFEKAIDEN------TKAVFAETIGNPAINVPDIEAIAE 166 (418)
T ss_pred EEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHH
Confidence 67788877754433 334567788888753 889999988653 347777888999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+|+++|++++||++|+.+....| .. ..+|.++.+++|+++.+
T Consensus 167 la~~~~i~livD~t~~~~~~~~~----l~---~g~Divv~S~sK~l~g~ 208 (418)
T TIGR01326 167 VAHAHGVPLIVDNTFATPYLCRP----ID---HGADIVVHSATKYIGGH 208 (418)
T ss_pred HHHHcCCEEEEECCCchhhcCCc----hh---cCCeEEEECccccccCC
Confidence 99999999999999986533222 11 13799999999998754
No 132
>PLN02483 serine palmitoyltransferase
Probab=99.31 E-value=6.3e-11 Score=122.98 Aligned_cols=168 Identities=14% Similarity=0.033 Sum_probs=119.5
Q ss_pred CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596 152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH 231 (375)
Q Consensus 152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~ 231 (375)
.++...|+.....++.+.+++++|.+ ..++.++|+.+|+.++.+...
T Consensus 137 ~sr~~~g~~~~~~ele~~lA~~~g~~-----------------------~ai~~~~G~~an~~~i~al~~---------- 183 (489)
T PLN02483 137 SSRVDGGTTKLHRELEELVARFVGKP-----------------------AAIVFGMGYATNSTIIPALIG---------- 183 (489)
T ss_pred ccccccCCcHHHHHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHhCC----------
Confidence 44555666677788999999999966 146667788888865544321
Q ss_pred CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcC-------CccEEEEEEcC
Q psy1596 232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKH-------LIPFFVCGTLG 304 (375)
Q Consensus 232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g-------~~p~~Vv~t~G 304 (375)
++..|++++..|.|+..++++.|.+++.++.+ |+++|++.+++....+ ....+|+...-
T Consensus 184 ---------~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v 249 (489)
T PLN02483 184 ---------KGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI 249 (489)
T ss_pred ---------CCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence 34579999999999999999999999999965 6788888887533211 11123444334
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC--CcccEEEEcCcccCCC
Q psy1596 305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV--EYANSIAFNPSKWLMV 367 (375)
Q Consensus 305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi--e~aDSi~~d~HK~l~~ 367 (375)
.+++|.+.++++|+++|++||+++++|+||+.+.. -+..+. ...++ ..+|.+..+++|.++.
T Consensus 250 ~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~ 315 (489)
T PLN02483 250 YSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPADVDIMMGTFTKSFGS 315 (489)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCcccCcEEEEecchhccc
Confidence 47889999999999999999999999999986542 111000 01122 3569999999998865
No 133
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.31 E-value=5.6e-11 Score=119.86 Aligned_cols=147 Identities=13% Similarity=0.058 Sum_probs=112.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++.|.+ .++++++|++|+..++.+... ++.
T Consensus 64 ~~Le~~lA~~~g~~-----------------------~~i~~~sG~~Ai~~~l~all~-------------------~Gd 101 (388)
T PRK07811 64 TALEEQLAALEGGA-----------------------YGRAFSSGMAATDCLLRAVLR-------------------PGD 101 (388)
T ss_pred HHHHHHHHHHhCCC-----------------------ceEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence 67788899988876 247778899988888766532 345
Q ss_pred EEEecCCCchHHHHHH-HH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG-LI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa-~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+....+ .+ .+.+++.++. .|+++|+++|+++ +.+|+++.+++++|.+.|+++|++
T Consensus 102 ~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-----~d~e~l~~~i~~~------tklV~ie~p~NPtg~~~dl~~I~~ 170 (388)
T PRK07811 102 HIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL-----SDLDAVRAAITPR------TKLIWVETPTNPLLSITDIAALAE 170 (388)
T ss_pred EEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC-----CCHHHHHHhcCcC------CeEEEEECCCCCcceecCHHHHHH
Confidence 7888999998665543 22 2455555553 4899999998653 348888899999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|+++++|++|+.+....| ... .+|.++.+++|+++.|-+
T Consensus 171 la~~~gi~lIvD~a~a~~~~~~p----~~~---gaDivv~S~sK~l~g~~~ 214 (388)
T PRK07811 171 LAHDAGAKVVVDNTFASPYLQQP----LAL---GADVVVHSTTKYIGGHSD 214 (388)
T ss_pred HHHHcCCEEEEECCCCccccCCc----hhh---CCcEEEecCceeecCCCC
Confidence 99999999999999987654222 111 479999999999997754
No 134
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.31 E-value=1.6e-10 Score=116.46 Aligned_cols=192 Identities=11% Similarity=-0.012 Sum_probs=132.8
Q ss_pred CCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE
Q psy1596 125 SPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF 204 (375)
Q Consensus 125 ~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf 204 (375)
...+++...+.+.+.+.+. ..+.+....|......++.+.+++++|.+ ..++
T Consensus 59 ~~~p~v~~a~~~~~~~~~~-----~~~~s~~~~g~~~~~~~Le~~la~~~g~~-----------------------~~l~ 110 (402)
T TIGR01821 59 GQHPEVLQAMHETLDKYGA-----GAGGTRNISGTNIPHVELEAELADLHGKE-----------------------SALV 110 (402)
T ss_pred CCCHHHHHHHHHHHHHcCC-----CCcchhhhhCCcHHHHHHHHHHHHHhCCC-----------------------eEEE
Confidence 3345555666555554321 11224444565666688999999999855 2588
Q ss_pred eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHH
Q psy1596 205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIE 284 (375)
Q Consensus 205 tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~ 284 (375)
+++|++||..++.+++.. .++.+|+++...|.|+..++.+.+..++.++. .|+++|++
T Consensus 111 ~~sG~~an~~ai~~l~~~-----------------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~ 168 (402)
T TIGR01821 111 FTSGYVANDATLATLAKI-----------------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEK 168 (402)
T ss_pred ECchHHHHHHHHHHhhCC-----------------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHH
Confidence 888999999998776531 02346777778899999988877777666654 37899999
Q ss_pred HHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcC
Q psy1596 285 AIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNP 361 (375)
Q Consensus 285 aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~ 361 (375)
.++.... ..+.+|+....++++|.+.|+++|.++|+++|++++||+||+.+.+ .+.... ...++ +..|.+...+
T Consensus 169 ~l~~~~~--~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-g~~g~g~~~~~~~~~~~div~~t~ 245 (402)
T TIGR01821 169 LLQSVDP--NRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-GPRGGGIAERDGLMHRIDIIEGTL 245 (402)
T ss_pred HHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-CCCCCccchhccCCCCCeEEEEec
Confidence 8874321 1255788888999999999999999999999999999999985432 121111 01122 3468887899
Q ss_pred cccCCCCC
Q psy1596 362 SKWLMVHF 369 (375)
Q Consensus 362 HK~l~~P~ 369 (375)
.|.++.+-
T Consensus 246 sKa~g~~G 253 (402)
T TIGR01821 246 AKAFGVVG 253 (402)
T ss_pred hhhhccCC
Confidence 99987543
No 135
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.31 E-value=5.6e-11 Score=121.34 Aligned_cols=138 Identities=7% Similarity=0.056 Sum_probs=109.2
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++.+.+++.+-.|++. ++...++|+|+|+++.+++.+..+
T Consensus 94 ~G~~~lr~aia~~~~~~~~~~~-------------------~~~~v~it~G~~~al~l~~~~l~~--------------- 139 (430)
T PLN00145 94 VGLLPARRAIAEYLSRDLPYEL-------------------STDDIYLTAGCAQAIEIIMSVLAQ--------------- 139 (430)
T ss_pred ccCHHHHHHHHHHHhhccCCCC-------------------ChhhEEEeCCHHHHHHHHHHHhcC---------------
Confidence 3566677777777777666653 345689999999998887765421
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN- 313 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp- 313 (375)
++..|++++.++..+...+.+.+.+++.+++ ++++.+|+++|++++++. +.+++.+.++++||.+-+
T Consensus 140 ----~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~P~NPtG~v~~~ 209 (430)
T PLN00145 140 ----PGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADEN------TVAMVIINPNNPCGSVYSY 209 (430)
T ss_pred ----CCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcC------ceEEEEeCCCCCCCCCCCH
Confidence 3457899999998888888888888888876 356889999999988653 347888889999999865
Q ss_pred --HHHHHHHHHhcCCEEEEecccccCc
Q psy1596 314 --LEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 314 --l~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+++|+++|+++|+++++|.+|+...
T Consensus 210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~ 236 (430)
T PLN00145 210 EHLAKIAETARKLGILVIADEVYDHLT 236 (430)
T ss_pred HHHHHHHHHHHHcCCEEEEeccchhhc
Confidence 8889999999999999999998643
No 136
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.31 E-value=5.2e-11 Score=119.71 Aligned_cols=173 Identities=13% Similarity=0.059 Sum_probs=122.2
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++++.+|+.+.+|.+. ++. ..++|+|+++++..++.+..+
T Consensus 73 ~G~~~lr~aia~~~~~~~~~~~-------------------~~~~~i~vt~G~~~al~~~~~~~~~-------------- 119 (394)
T PRK05942 73 EGTASFRQAITDWYHRRYGVEL-------------------DPDSEALPLLGSKEGLTHLALAYVN-------------- 119 (394)
T ss_pred CCCHHHHHHHHHHHHHHHCCCc-------------------CCCCeEEEccChHHHHHHHHHHhCC--------------
Confidence 4666788899999998888763 223 367789999998777654321
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
++..|++++.++..+...+...|.+++.||.+. ++.+|+++|++++.+. +.+|+.+.++++||.+-+
T Consensus 120 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~~~s 188 (394)
T PRK05942 120 -----PGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTATAP 188 (394)
T ss_pred -----CCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCCcCC
Confidence 345799999999988888777788999999863 4579999999988642 447777788999999855
Q ss_pred ---HHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596 314 ---LEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM 374 (375)
Q Consensus 314 ---l~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l 374 (375)
+++|+++|+++++|+++|++|+-...-. +.... +.+.....-..-++.|.++ ...-+|.+
T Consensus 189 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~-~~~~~~~~i~~~SfSK~~~~~GlRiG~i 255 (394)
T PRK05942 189 REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLE-IPGAKDIGVEFHTLSKTYNMAGWRVGFV 255 (394)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhh-CCCccccEEEEecchhccCChhhheeee
Confidence 8899999999999999999998643210 00100 1111112234567779664 33446654
No 137
>PRK04311 selenocysteine synthase; Provisional
Probab=99.31 E-value=4.2e-11 Score=123.42 Aligned_cols=158 Identities=11% Similarity=0.035 Sum_probs=111.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.+++++|.+ ..+++++|+.|+..++.+. . ++.
T Consensus 130 ~~~e~~lA~l~Gae-----------------------~a~vv~sgtaAl~l~l~~l-~-------------------~Gd 166 (464)
T PRK04311 130 RALAALLCALTGAE-----------------------DALVVNNNAAAVLLALNAL-A-------------------AGK 166 (464)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHh-C-------------------CCC
Confidence 57889999999876 2688999999988777432 1 234
Q ss_pred EEEecCCCchHH------HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC--cc--cccc
Q psy1596 244 VAYCSDQAHSSV------EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG--AC--AFDN 313 (375)
Q Consensus 244 vV~~S~~aH~Sv------~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~--tG--avDp 313 (375)
.|++|+..|+++ ...+...|.+++.|+++ ...++++++++|.+++ .+|+.+..++. +| .+-|
T Consensus 167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~T------klV~~vh~sN~~i~G~~~~~d 238 (464)
T PRK04311 167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENT------ALLLKVHTSNYRIEGFTKEVS 238 (464)
T ss_pred EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccC------eEEEEEcCCCccccccCCcCC
Confidence 788898877743 22344567888888764 3468999999997653 36666666664 45 5679
Q ss_pred HHHHHHHHHhcCCEEEEecccccCc----c---cchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSS----F---ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~----~---~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|+++|++||+++++|++.|... . -.|.....+. ..||.+++++|||++.|. +|+++
T Consensus 239 l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~--~GaDiv~fSg~K~LgGp~-~G~i~ 304 (464)
T PRK04311 239 LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLA--AGVDLVTFSGDKLLGGPQ-AGIIV 304 (464)
T ss_pred HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHh--cCCcEEEecCcccccCCc-eEEEE
Confidence 9999999999999999999654321 0 1122222111 147999999999999995 78763
No 138
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.31 E-value=4.8e-11 Score=120.63 Aligned_cols=147 Identities=9% Similarity=0.062 Sum_probs=113.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.++++.|.+ .+++++|||+|+..++.+... ++.
T Consensus 68 ~~Le~~lA~l~g~~-----------------------~~l~~~sgt~Ai~~~l~al~~-------------------~GD 105 (394)
T PRK07050 68 LALAQRLAEIEGGR-----------------------HALLQPSGLAAISLVYFGLVK-------------------AGD 105 (394)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEeccHHHHHHHHHHHHhC-------------------CCC
Confidence 67888899988754 479999999999988876522 346
Q ss_pred EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..|.+.... +...|.+++.++.+ +.++|+++|++. +.+|+.+.+++.+|.+.++++|++
T Consensus 106 ~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~-----~~~~l~~~i~~~------tklV~le~p~Np~~~~~di~~I~~ 174 (394)
T PRK07050 106 DVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL-----IGAGIADLIQPN------TRLIWLEAPGSVTMEVPDVPAITA 174 (394)
T ss_pred EEEEecCCcccHHHHHHHHHHhcCeEEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCccHhhHHHHHH
Confidence 799999999876653 34457778777643 457788887543 447888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|+++++|+||+.+...-| +..| +|.++.+++|++...-+
T Consensus 175 ia~~~gi~livD~a~a~~~~~~~----l~~G---aDi~v~S~tK~~~g~~~ 218 (394)
T PRK07050 175 AARARGVVTAIDNTYSAGLAFKP----FEHG---VDISVQALTKYQSGGSD 218 (394)
T ss_pred HHHHcCCEEEEECCcccccccCH----HHcC---CeEEEEECCceecCCCC
Confidence 99999999999999988754322 2223 69999999999865543
No 139
>PLN02242 methionine gamma-lyase
Probab=99.31 E-value=5.8e-11 Score=121.00 Aligned_cols=147 Identities=13% Similarity=0.087 Sum_probs=112.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..++|+||++|+..++.+... ++.
T Consensus 79 ~~LE~~lA~l~g~~-----------------------~~l~~~sG~~Ai~~al~al~~-------------------~GD 116 (418)
T PLN02242 79 LNLGRQMAALEGTE-----------------------AAYCTASGMSAISSVLLQLCS-------------------SGG 116 (418)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEEccHHHHHHHHHHHHhC-------------------CCC
Confidence 78889999998876 258999999999988876532 345
Q ss_pred EEEecCCCchHHHHHH-----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG-----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG 318 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa-----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~ 318 (375)
.|+++...+......+ +..+.+++.++.+ |+++|+++|++. .+.+|+.+.+++++|.+.|+++|+
T Consensus 117 ~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~-----d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~ 186 (418)
T PLN02242 117 HVVASNTLYGGTHALLAHFLPRKCNITTTFVDIT-----DLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELA 186 (418)
T ss_pred EEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCC-----CHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHH
Confidence 7888888776665544 2345566656542 899999988642 144788889999999999999999
Q ss_pred HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
++|+++|++++||.+|+.. .+.+. . .| +|.+..+++|+++.+-+
T Consensus 187 ~la~~~gi~livDea~~~~-~~~~~--~--~g---~divv~S~SK~l~g~g~ 230 (418)
T PLN02242 187 RIAHEKGVTVVVDNTFAPM-VLSPA--R--LG---ADVVVHSISKFISGGAD 230 (418)
T ss_pred HHHHHhCCEEEEECCCCcc-CCCHH--H--cC---CcEEEEeCccccCCCCC
Confidence 9999999999999999643 23221 1 13 69999999999877654
No 140
>PLN02509 cystathionine beta-lyase
Probab=99.31 E-value=3.6e-11 Score=123.85 Aligned_cols=152 Identities=11% Similarity=0.079 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
..+++.++++++.|-+ ..+++++|+.++ .++.... .+
T Consensus 134 t~~aLE~~lA~leg~e-----------------------~ai~~~SG~aAi-~~il~ll-------------------~~ 170 (464)
T PLN02509 134 TRDALESLLAKLDKAD-----------------------RAFCFTSGMAAL-SAVTHLI-------------------KN 170 (464)
T ss_pred HHHHHHHHHHHHhCCC-----------------------EEEEeCcHHHHH-HHHHHHh-------------------CC
Confidence 3488899999987754 357778887654 3333221 13
Q ss_pred ceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
+..|++++..|.+..+.+ ...|.+++.++. .|+++|+++|.+. +.+|+++.+++++|.+.||++|
T Consensus 171 GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~-----~d~e~l~~ai~~~------TklV~lesPsNPtG~i~Dl~~I 239 (464)
T PLN02509 171 GEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT-----TNLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKI 239 (464)
T ss_pred CCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC-----CCHHHHHHhCCcC------CeEEEEECCCCCCCCHHHHHHH
Confidence 457889999998877543 345777777764 3788999888543 3488889999999999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM 374 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l 374 (375)
+++|+++|++++||+||+.+....| . + ..+|.+++++|||+..|-+ +|++
T Consensus 240 ~~lAk~~g~~lIVD~A~a~~~~~~p----l--~-~gaDivv~S~tK~l~G~gdv~gG~v 291 (464)
T PLN02509 240 AEMAHAQGALVLVDNSIMSPVLSRP----L--E-LGADIVMHSATKFIAGHSDVMAGVL 291 (464)
T ss_pred HHHHHHcCCEEEEECCccccccCCh----h--h-cCCcEEEecCcccccCCCccceeEE
Confidence 9999999999999999987754222 1 1 2479999999999998876 6654
No 141
>PRK07550 hypothetical protein; Provisional
Probab=99.30 E-value=8.4e-11 Score=117.72 Aligned_cols=173 Identities=10% Similarity=-0.036 Sum_probs=121.7
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++.+.+++.+..|... .+...++|+|+++++..++.+...
T Consensus 67 ~G~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~--------------- 112 (386)
T PRK07550 67 EGLPELREAYAAHYSRLYGAAI-------------------SPEQVHITSGCNQAFWAAMVTLAG--------------- 112 (386)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CcceEEEecCcHHHHHHHHHHhcC---------------
Confidence 4677788888889988888763 335688899999998776655422
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-- 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-- 312 (375)
++..|++++.++......++..|.+++.|+.++ .+.+|+++|++++++. +.+|+.+.++++||.+-
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~P~NPtG~~~~~ 182 (386)
T PRK07550 113 ----AGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPR------TRAIALVTPNNPTGVVYPP 182 (386)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhccc------CcEEEEeCCCCCCCcccCH
Confidence 345789999988887777788889999999963 4668999999999753 33566677899999874
Q ss_pred -cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC-cc-cEEEEcCcccCCCC-Cccee
Q psy1596 313 -NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-YA-NSIAFNPSKWLMVH-FDCTA 373 (375)
Q Consensus 313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~a-DSi~~d~HK~l~~P-~~~g~ 373 (375)
.+++|+++|+++|+++++|++|+....-.......+...+ .. ..+..+++|.++.| ..+|.
T Consensus 183 ~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 247 (386)
T PRK07550 183 ELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGA 247 (386)
T ss_pred HHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEe
Confidence 5889999999999999999999864210000000111100 11 23467999988644 33444
No 142
>PLN02231 alanine transaminase
Probab=99.30 E-value=6.1e-11 Score=124.30 Aligned_cols=145 Identities=14% Similarity=0.101 Sum_probs=118.5
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..|++. ++...++|+|+++++..++.+...
T Consensus 168 ~G~~~lReaIA~~~~~r~g~~~-------------------~pe~I~iT~Ga~~ai~~~~~~l~~--------------- 213 (534)
T PLN02231 168 QGIKGLRDAIAAGIEARDGFPA-------------------DPNDIFLTDGASPAVHMMMQLLIR--------------- 213 (534)
T ss_pred CCcHHHHHHHHHHHHhccCCCC-------------------CcccEEEeCCHHHHHHHHHHHhcc---------------
Confidence 5777888888999988878774 445789999999998887766532
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
.++..|++...++..+..++.+.+.+++.++.++ ++.+|+++|++++++...++..+.+|+.+.++|+||.+
T Consensus 214 ---~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~ 290 (534)
T PLN02231 214 ---SEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAE 290 (534)
T ss_pred ---CCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCH
Confidence 0245788999999999888888888999999874 47899999999998765555456677778889999998
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+.+++|+++|++||+||++|.+|.-..
T Consensus 291 e~l~~Iv~~a~~~~l~lI~DEvY~~l~ 317 (534)
T PLN02231 291 ENQRDIVEFCKQEGLVLLADEVYQENV 317 (534)
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcc
Confidence 678899999999999999999998753
No 143
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.30 E-value=2.9e-11 Score=119.19 Aligned_cols=174 Identities=20% Similarity=0.179 Sum_probs=122.7
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
|...+++.+.+|+.+--|++. +....+++++|+.+++..+......
T Consensus 45 g~~~lr~~ia~~~~~~~~~~~-------------------~~~~~i~~~~G~~~~~~~~~~~~~~--------------- 90 (363)
T PF00155_consen 45 GYPELREAIADFLGRRYGVPV-------------------DPEANILVTSGAQAALFLLLRLLKI--------------- 90 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTHHT-------------------TGGEGEEEESHHHHHHHHHHHHHHS---------------
T ss_pred hhHHHHHHHHHHhhhccCccc-------------------ccceEEEEecccccchhhhhhcccc---------------
Confidence 566666777777775555552 2221456666666665555443310
Q ss_pred hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596 238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D 312 (375)
Q Consensus 238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D 312 (375)
.++..|++.+..|..+...++..+.+++.+|.+ +++.+|+++|++.+++...++..+.+|+.+.++++||.+ +
T Consensus 91 --~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~ 168 (363)
T PF00155_consen 91 --NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLE 168 (363)
T ss_dssp --STTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HH
T ss_pred --cccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccc
Confidence 134579999999999999999888889999864 788999999999999866555335678888899999987 5
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccchhh---hhhhcCCCcccEEEEcCcccCCCC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEF---RKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~---~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
.+.+|+++|++||+|+++|.+|+....-.+.+ ...+..- .---+.-++.|.++.|
T Consensus 169 ~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~ 226 (363)
T PF00155_consen 169 ELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDED-DNVIVVGSLSKSFGLP 226 (363)
T ss_dssp HHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTT-STEEEEEESTTTTTSG
T ss_pred cccchhhhhcccccceeeeeceeccccCCCccCccccccccc-ccceeeeecccccccc
Confidence 66677777999999999999999976543221 1112211 1136888999987655
No 144
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.30 E-value=7.6e-11 Score=118.77 Aligned_cols=147 Identities=9% Similarity=0.049 Sum_probs=109.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..+++++|+.++..++.+... ++.
T Consensus 64 ~~Le~~lA~l~G~~-----------------------~al~~~sG~~Ai~~~l~al~~-------------------~Gd 101 (386)
T PRK06767 64 KLFEERMAVLEGGE-----------------------EALAFGSGMAAISATLIGFLK-------------------AGD 101 (386)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence 77888999998865 258889999887776654321 345
Q ss_pred EEEecCCCchHHHHHHH-H---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL-I---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~-l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+....+. + .+.++..++. .|+++++++|++. +.+|++..+++++|.+-|+++|++
T Consensus 102 ~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~-----~d~~~l~~~i~~~------tklV~lesp~NptG~v~dl~~I~~ 170 (386)
T PRK06767 102 HIICSNGLYGCTYGFLEVLEEKFMITHSFCDM-----ETEADIENKIRPN------TKLIFVETPINPTMKLIDLKQVIR 170 (386)
T ss_pred EEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC-----CCHHHHHHhhCcC------ceEEEEeCCCCCCceecCHHHHHH
Confidence 78888888877666543 2 2344444433 3889999988643 347888899999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|++++||+||+.+....| .. ..+|.++.+++|++..+-+
T Consensus 171 la~~~g~~vivD~a~a~~~~~~p----l~---~g~Div~~S~sK~l~g~g~ 214 (386)
T PRK06767 171 VAKRNGLLVIVDNTFCSPYLQRP----LE---LGCDAVVHSATKYIGGHGD 214 (386)
T ss_pred HHHHcCCEEEEECCCcccccCCc----hh---cCCcEEEecCcceecCCCC
Confidence 99999999999999976543222 11 2469999999999987754
No 145
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.30 E-value=2.1e-10 Score=115.81 Aligned_cols=190 Identities=8% Similarity=-0.010 Sum_probs=128.8
Q ss_pred hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596 128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT 207 (375)
Q Consensus 128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG 207 (375)
+++.....+.+++-.+ ..+.++.+-|+.....++.+.+++++|.+ ..++.++
T Consensus 15 ~~~~~~~~~a~~~~g~-----~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-----------------------~al~~~s 66 (392)
T PLN03227 15 PTLRQTALESLSHYGC-----GSCGPRGFYGTIDAHLELEQCMAEFLGTE-----------------------SAILYSD 66 (392)
T ss_pred HHHHHHHHHHHHHhCC-----CCcccccccCChHHHHHHHHHHHHHhCCC-----------------------cEEEecC
Confidence 4556666666655321 12233334555556688889999999876 2588888
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596 208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE 287 (375)
Q Consensus 208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~ 287 (375)
|+.+|..++.+... ++..|++++..|.|+..++.+.+.+++.++.+ |++++++.++
T Consensus 67 G~~a~~~~i~~l~~-------------------~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-----d~~~l~~~~~ 122 (392)
T PLN03227 67 GASTTSSTVAAFAK-------------------RGDLLVVDRGVNEALLVGVSLSRANVRWFRHN-----DMKDLRRVLE 122 (392)
T ss_pred cHHHHHHHHHHhCC-------------------CCCEEEEeccccHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHH
Confidence 88888866655321 45689999999999999988877788777764 4566666554
Q ss_pred Hhhh--------cCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhh-hcCCCccc
Q psy1596 288 RDKK--------KHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKW-LAGVEYAN 355 (375)
Q Consensus 288 ~~~~--------~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~-~~gie~aD 355 (375)
.... ....+.+|++....+++|.+-|+++|.++|++||+++++|.+|+.+..-- .-..+. +.....+|
T Consensus 123 ~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~D 202 (392)
T PLN03227 123 QVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAE 202 (392)
T ss_pred HhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCce
Confidence 3221 11235567777777889999999999999999999999999998543210 001110 11124579
Q ss_pred EEEEcCcccCCCCCc
Q psy1596 356 SIAFNPSKWLMVHFD 370 (375)
Q Consensus 356 Si~~d~HK~l~~P~~ 370 (375)
.++.+.+|.++ |.+
T Consensus 203 iv~~slsk~~g-~~g 216 (392)
T PLN03227 203 IVTFSLENAFG-SVG 216 (392)
T ss_pred EEEeechhhhh-ccC
Confidence 99999999865 443
No 146
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.30 E-value=6.3e-11 Score=118.19 Aligned_cols=147 Identities=14% Similarity=0.103 Sum_probs=109.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
++..+.+++++|.+ .++.+++||.|+.+|+.+..- .++.
T Consensus 28 ~~fE~~~a~~~g~~-----------------------~~~~~~sgt~Al~~al~~l~~------------------~~gd 66 (363)
T PF01041_consen 28 EEFEKEFAEYFGVK-----------------------YAVAVSSGTSALHLALRALGL------------------GPGD 66 (363)
T ss_dssp HHHHHHHHHHHTSS-----------------------EEEEESSHHHHHHHHHHHTTG------------------GTTS
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEeCChhHHHHHHHHhcCC------------------CcCc
Confidence 77888889998876 479999999999999887321 2456
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
.|+++..+..+...++...|.+++.+++| +++.||+++|+++|++.++ +|+++ ...|...++++|.++|+
T Consensus 67 eVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~------ai~~~---h~~G~~~d~~~i~~~~~ 137 (363)
T PF01041_consen 67 EVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTK------AILVV---HLFGNPADMDAIRAIAR 137 (363)
T ss_dssp EEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HHHHHHHHH
T ss_pred eEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCcc------EEEEe---cCCCCcccHHHHHHHHH
Confidence 89999999999999999999999999998 7899999999999997753 56655 46788889999999999
Q ss_pred hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccC
Q psy1596 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWL 365 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l 365 (375)
++|++++.|+|++.++.. +...-| ...|..++|+| |.+
T Consensus 138 ~~~i~lIeD~a~a~g~~~----~g~~~G-~~gd~~~fSf~~~K~i 177 (363)
T PF01041_consen 138 KHGIPLIEDAAQAFGARY----KGRPVG-SFGDIAIFSFHPTKII 177 (363)
T ss_dssp HTT-EEEEE-TTTTT-EE----TTEETT-SSSSEEEEESSTTSSS
T ss_pred HcCCcEEEccccccCcee----CCEecc-CCCCceEecCCCCCCC
Confidence 999999999999998643 222222 23477777765 766
No 147
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.30 E-value=7e-11 Score=120.67 Aligned_cols=147 Identities=12% Similarity=0.035 Sum_probs=114.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.++++.|.+ ..+++++|+.|+..++.+... ++.
T Consensus 66 ~~le~~lA~l~g~~-----------------------~al~~~SG~~Ai~~al~all~-------------------pGd 103 (427)
T PRK05994 66 AVLEERVAALEGGT-----------------------AALAVASGHAAQFLVFHTLLQ-------------------PGD 103 (427)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHHHHHhC-------------------CCC
Confidence 66788889988765 268999999999988766532 345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+..+.. ...+.+++.++.+ |+++|+++|++. +.+|+++.+++++|.+-|+++|++
T Consensus 104 ~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~------tklV~vesp~NptG~v~dl~~I~~ 172 (427)
T PRK05994 104 EFIAARKLYGGSINQFGHAFKSFGWQVRWADAD-----DPASFERAITPR------TKAIFIESIANPGGTVTDIAAIAE 172 (427)
T ss_pred EEEEecCcchhHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHH
Confidence 7888888888665543 3356788887753 889999998653 447888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|++++||++|+.+...-| .. ..+|.++.++|||++.+-+
T Consensus 173 la~~~gi~livD~a~a~~~~~~p----l~---~gaDivv~S~tK~lgg~~~ 216 (427)
T PRK05994 173 VAHRAGLPLIVDNTLASPYLIRP----IE---HGADIVVHSLTKFLGGHGN 216 (427)
T ss_pred HHHHcCCEEEEECCccccccCCc----cc---cCCcEEEEcCccccCCCCC
Confidence 99999999999999987643222 11 1479999999999987653
No 148
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.29 E-value=6.6e-11 Score=119.94 Aligned_cols=151 Identities=12% Similarity=0.003 Sum_probs=112.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..+++++|+.|+..++.+.. .++.
T Consensus 68 ~~le~~lA~l~g~~-----------------------~~i~~~sG~~Al~~~l~~ll-------------------~~Gd 105 (403)
T PRK07503 68 ALLEQRMASLEGGE-----------------------AAVALASGMGAITATLWTLL-------------------RPGD 105 (403)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHHHHHc-------------------CCCC
Confidence 77888899998876 25888999998777765431 1345
Q ss_pred EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|..... .+...|.+++.++.+ |+++|+++|++. +.+|+...+++++|.+-|+++|++
T Consensus 106 ~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~------tklV~le~p~NPtG~~~di~~I~~ 174 (403)
T PRK07503 106 EVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-----DPAALKAAISDK------TRMVYFETPANPNMRLVDIAAVAE 174 (403)
T ss_pred EEEEccCccchHHHHHHHHHhhCCEEEEEeCCC-----CHHHHHHhcCcc------CcEEEEeCCCCCCCeeeCHHHHHH
Confidence 78888887754333 233456777777764 789999988653 347777889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM 374 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l 374 (375)
+|+++|+++++|++|+.+....| . + -.+|.++.+++|+++.+-+ .|++
T Consensus 175 la~~~gi~lIvD~a~a~~~~~~~----l--~-~g~Di~v~S~tK~l~g~gd~~gG~v 224 (403)
T PRK07503 175 IAHGAGAKVVVDNTYCTPYLQRP----L--E-LGADLVVHSATKYLGGHGDITAGLV 224 (403)
T ss_pred HHHHcCCEEEEECCCcccccCCc----h--h-hCCCEEEccccccccCCCceeEEEE
Confidence 99999999999999987533211 1 1 1469999999999987654 5654
No 149
>PRK08363 alanine aminotransferase; Validated
Probab=99.29 E-value=5.9e-11 Score=119.39 Aligned_cols=172 Identities=9% Similarity=-0.034 Sum_probs=120.4
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..|... ++...++|+|+|+++..++.+..+
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~it~G~~~al~~~~~~~~~--------------- 115 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDI-------------------TPDDVRVTAAVTEALQLIFGALLD--------------- 115 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEeCCHHHHHHHHHHHhCC---------------
Confidence 4566777888888877777653 334689999999998887765422
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEE-ecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYI-ESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-- 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~V-p~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-- 312 (375)
++..|++++.+|.++...+...+.+++.+ +.+ +.+.+|+++|++++.+. +.+|+.+.++++||.+-
T Consensus 116 ----~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~ 185 (398)
T PRK08363 116 ----PGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEK------TKAIAVINPNNPTGALYEK 185 (398)
T ss_pred ----CCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcc------eEEEEEECCCCCCCcCcCH
Confidence 34578999999999988887767777777 454 34679999999988543 34677788999999874
Q ss_pred -cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc-cEE-EEcCcccC-CCCCcceee
Q psy1596 313 -NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA-NSI-AFNPSKWL-MVHFDCTAM 374 (375)
Q Consensus 313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a-DSi-~~d~HK~l-~~P~~~g~l 374 (375)
++++|+++|+++|+++++|++|+.... .+.... ...+... ..+ .-+++|++ ....-+|.+
T Consensus 186 ~~~~~l~~~a~~~~~~li~Deay~~~~~-~~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 249 (398)
T PRK08363 186 KTLKEILDIAGEHDLPVISDEIYDLMTY-EGKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYI 249 (398)
T ss_pred HHHHHHHHHHHHcCeEEEEhhhhhhhcc-CCcccC-HHHcCcCCcEEEEecchhccCCccceEEEE
Confidence 499999999999999999999986432 111100 1111111 233 45899984 444555543
No 150
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.29 E-value=7.8e-11 Score=118.45 Aligned_cols=146 Identities=10% Similarity=0.047 Sum_probs=110.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..+++++|++|+..++.+... ++.
T Consensus 57 ~~le~~la~l~g~~-----------------------~~~~~~sG~~Ai~~al~al~~-------------------~Gd 94 (380)
T TIGR01325 57 AAFEERIAALEGAE-----------------------RAVATATGMSAIQAALMTLLQ-------------------AGD 94 (380)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence 67788899998875 258899999999988865422 234
Q ss_pred EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+... .+...+.+++.++.+ |+++|++++++. +.+|+...+++++|.+.|+++|++
T Consensus 95 ~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~ 163 (380)
T TIGR01325 95 HVVASRSLFGSTVGFISEILPRFGIEVSFVDPT-----DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAE 163 (380)
T ss_pred EEEEecCCcchHHHHHHHHHHHhCCEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHH
Confidence 57777777755433 233456788888764 788998887543 447888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|++++||++|+.+....| . -. .+|.++.++||+++.+-
T Consensus 164 la~~~gi~livD~a~~~~~~~~p-l---~~---g~Divv~S~sK~l~g~g 206 (380)
T TIGR01325 164 LAHAIGALLVVDNVFATPVLQQP-L---KL---GADVVVYSATKHIDGQG 206 (380)
T ss_pred HHHHcCCEEEEECCCcccccCCc-h---hh---CCCEEEeeccceecCCC
Confidence 99999999999999986543222 1 11 36999999999998763
No 151
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.29 E-value=1.4e-10 Score=117.39 Aligned_cols=142 Identities=13% Similarity=0.090 Sum_probs=106.1
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
|..++++.+.+|+.+.++.+.+ .|...++...++|+|+++++..++.+...
T Consensus 76 G~~~Lr~aia~~~~~~~~~~~~-------------~~~~~~~~~i~it~G~~~al~~~~~~~~~---------------- 126 (412)
T PTZ00433 76 GSPEAREAVATYWRNSFVHKES-------------LKSTIKKDNVVLCSGVSHAILMALTALCD---------------- 126 (412)
T ss_pred CcHHHHHHHHHHHHhhcccccc-------------ccCCCChhhEEEeCChHHHHHHHHHHhcC----------------
Confidence 3445557777777765542100 00000345689999999999887765432
Q ss_pred hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596 238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D 312 (375)
Q Consensus 238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D 312 (375)
++..|+++..+|..+...+...|.+++.+|.+ +++.+|+++|++++++. +.+|+.+.++++||.+ +
T Consensus 127 ---~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~NPtG~~~s~~ 197 (412)
T PTZ00433 127 ---EGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDR------TKALIMTNPSNPCGSNFSRK 197 (412)
T ss_pred ---CCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccC------ceEEEEeCCCCCCCcccCHH
Confidence 34578899999999988888888899999985 35789999999888653 3467788899999975 6
Q ss_pred cHHHHHHHHHhcCCEEEEecccccC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
++++|+++|+++|++|++|.+|...
T Consensus 198 ~~~~l~~~a~~~~~~ii~De~y~~~ 222 (412)
T PTZ00433 198 HVEDIIRLCEELRLPLISDEIYAGM 222 (412)
T ss_pred HHHHHHHHHHHcCCeEEEecccccc
Confidence 7888999999999999999999864
No 152
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.29 E-value=6.4e-11 Score=119.51 Aligned_cols=150 Identities=9% Similarity=0.026 Sum_probs=113.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++.|.+ ..+++++|+.++..++. ... ++.
T Consensus 57 ~~le~~lA~l~g~~-----------------------~~v~~~sG~~ai~~~l~-~l~-------------------~Gd 93 (390)
T PRK08064 57 EALEDIIAELEGGT-----------------------KGFAFASGMAAISTAFL-LLS-------------------KGD 93 (390)
T ss_pred HHHHHHHHHHhCCC-----------------------CeEEECCHHHHHHHHHH-HhC-------------------CCC
Confidence 77888999998865 24777888877665553 111 234
Q ss_pred EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..|.+.... +...|.+++.|+.+ |++++++++++. +.+|+++.+++++|.+-|+++|.+
T Consensus 94 ~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~------tklV~l~~p~NptG~~~dl~~I~~ 162 (390)
T PRK08064 94 HVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT-----NLEEVAQNIKPN------TKLFYVETPSNPLLKVTDIRGVVK 162 (390)
T ss_pred EEEEccCccchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCcEeccHHHHHH
Confidence 688888888755543 33467788888864 788898888653 348888999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM 374 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l 374 (375)
+|+++|++++||+||+.+....|. -. .+|.++.++|||++.|.+ .|++
T Consensus 163 la~~~g~~vvvD~a~~~~~~~~~~----~~---g~Divv~S~tK~~~G~~~~laG~~ 212 (390)
T PRK08064 163 LAKAIGCLTFVDNTFLTPLLQKPL----DL---GADVVLHSATKFLAGHSDVLAGLA 212 (390)
T ss_pred HHHHcCCEEEEECCCCcccccCch----hh---CCcEEEeecceeccCCccceeEEE
Confidence 999999999999999876543321 11 369999999999988876 4654
No 153
>PRK05939 hypothetical protein; Provisional
Probab=99.29 E-value=6.3e-11 Score=119.95 Aligned_cols=145 Identities=14% Similarity=0.078 Sum_probs=110.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.|+++.|.. ..+.+++|+.|+..++.+... ++.
T Consensus 50 ~~lE~~la~leg~~-----------------------~~v~~ssG~~Ai~~~l~all~-------------------~Gd 87 (397)
T PRK05939 50 AALEAKITKMEGGV-----------------------GTVCFATGMAAIAAVFLTLLR-------------------AGD 87 (397)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHHcC-------------------CCC
Confidence 67788888887765 257788888888777755421 345
Q ss_pred EEEecCCCchH---HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 244 VAYCSDQAHSS---VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~S---v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
.|++++..|.+ +.+.+...|.+++.++.+ |+++|+++|++. +.+|+++.+++++|.+.|+++|+++
T Consensus 88 ~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-----d~e~l~~~l~~~------tklV~vesp~NptG~v~dl~~I~~l 156 (397)
T PRK05939 88 HLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-----DVQNVAAAIRPN------TRMVFVETIANPGTQVADLAGIGAL 156 (397)
T ss_pred EEEECCCccccHHHHHHHHHhcCCEEEEECCC-----CHHHHHHhCCCC------CeEEEEECCCCCCCCHHhHHHHHHH
Confidence 68888887644 344454567788888763 889999998643 4478888999999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
|+++|++++||++|+.+..+-|. .. .+|.+..++||+++.+
T Consensus 157 a~~~gi~livD~t~a~~~~~~~~----~~---gaDivv~S~sK~~~g~ 197 (397)
T PRK05939 157 CRERGLLYVVDNTMTSPWLFRPK----DV---GASLVINSLSKYIAGH 197 (397)
T ss_pred HHHcCCEEEEECCcccccccCcc----cc---CCEEEEecCeecccCC
Confidence 99999999999999876433221 11 4799999999999865
No 154
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.29 E-value=8.9e-11 Score=119.15 Aligned_cols=147 Identities=13% Similarity=0.047 Sum_probs=109.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.++++.|.+ ..+++++|++++.+++.+... ++.
T Consensus 63 ~~Le~~lA~l~g~~-----------------------~~v~~~sG~~Ai~~~l~all~-------------------pGD 100 (405)
T PRK08776 63 DLLGEALAELEGGA-----------------------GGVITATGMGAINLVLNALLQ-------------------PGD 100 (405)
T ss_pred HHHHHHHHHHhCCC-----------------------ceEEEcCHHHHHHHHHHHHhC-------------------CCC
Confidence 67788899988765 258899999887766654421 345
Q ss_pred EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++..++...... +...+.+++.++. .|+++|++++++. +.+|+++.+++++|.+.++++|++
T Consensus 101 ~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~-----~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~ 169 (405)
T PRK08776 101 TLVVPHDAYGGSWRLFNALAKKGHFALITADL-----TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIE 169 (405)
T ss_pred EEEEccCCchHHHHHHHHHHHhcCcEEEEECC-----CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHH
Confidence 678888888764332 2345667777654 4889999888643 447888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|++++||++|+.+....| . . ..+|.+..++||+++.|-+
T Consensus 170 la~~~gi~vIvD~a~a~~~~~~p----l-~--~gaDivv~S~tK~l~g~~~ 213 (405)
T PRK08776 170 AAHKVGALTVVDNTFLSPALQKP----L-E--FGADLVLHSTTKYINGHSD 213 (405)
T ss_pred HHHHcCCEEEEECCCcccccCCc----c-c--ccCCEEEecCceeecCCCC
Confidence 99999999999999987543222 1 1 1479999999999988754
No 155
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.29 E-value=1.3e-10 Score=117.26 Aligned_cols=114 Identities=11% Similarity=0.137 Sum_probs=92.7
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCc
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSL 277 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~m 277 (375)
...++|+|+|+++..++.+..+ ++..|+++..++..+...+...+.+++.++.+ +++.+
T Consensus 97 ~~ii~t~G~t~al~~~~~~l~~-------------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (403)
T TIGR01265 97 DDVVLTSGCSQAIEICIEALAN-------------------PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEI 157 (403)
T ss_pred HHEEEecChHHHHHHHHHHhCC-------------------CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCcc
Confidence 4589999999999888776532 23468899999988888777777888888874 45789
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
|++++++++.+. +.+|+.+.+++++|.+ +++++|+++|+++|+|+++|++|+...
T Consensus 158 d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~ 215 (403)
T TIGR01265 158 DLDGLEALADEK------TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMV 215 (403)
T ss_pred CHHHHHHHhCcC------ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccc
Confidence 999999988543 3367778889999988 469999999999999999999998754
No 156
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.29 E-value=2.2e-10 Score=115.20 Aligned_cols=172 Identities=13% Similarity=0.027 Sum_probs=121.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..+.+. ++...++|+|+++++..++.+...
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~--------------- 118 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPL-------------------TADHIVMTCGAAGALNVALKAILN--------------- 118 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CcCcEEEeCChHHHHHHHHHHhcC---------------
Confidence 4566666777778777666542 334689999999998776654321
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--- 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--- 312 (375)
++..|++++.++..+...+...+.+++.+|.+++ +.+|+++|++++++. +.+|+++.++++||.+-
T Consensus 119 ----~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~~ 188 (394)
T PRK06836 119 ----PGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPK------TKAVIINSPNNPTGVVYSEE 188 (394)
T ss_pred ----CCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcC------ceEEEEeCCCCCCCcCCCHH
Confidence 2457888999998888877777889999999766 789999999998653 34677788999999984
Q ss_pred cHHHHHHHHHh------cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596 313 NLEELGPICEK------EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA 373 (375)
Q Consensus 313 pl~eI~~ia~~------~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~ 373 (375)
.+++|+++|++ ||+|+++|.+|+....-...........+ -..+..++.|.++.| .-+|.
T Consensus 189 ~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~pGlRiG~ 255 (394)
T PRK06836 189 TLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYD-NSIVVYSFSKSLSLPGERIGY 255 (394)
T ss_pred HHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccC-cEEEEecchhhccCcceeeEE
Confidence 57778888998 89999999999864321000001111122 246678899988644 34444
No 157
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.29 E-value=9.7e-11 Score=118.80 Aligned_cols=146 Identities=9% Similarity=-0.045 Sum_probs=111.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.|+++.|.+ ..+++++|+.|+..++.+... ++.
T Consensus 73 ~~le~~lA~l~g~~-----------------------~al~~~sG~~Ai~~~l~all~-------------------~Gd 110 (403)
T PRK07810 73 SMFEERLRLIEGAE-----------------------ACFATASGMSAVFTALGALLG-------------------AGD 110 (403)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECChHHHHHHHHHHHhC-------------------CCC
Confidence 67888899998865 369999999999887765421 345
Q ss_pred EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|..... .+...|.+++.++.+ |+++|+++|++.+ .+|++..+++++|.+-|+++|++
T Consensus 111 ~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~t------klV~~esp~Nptg~v~dl~~I~~ 179 (403)
T PRK07810 111 RLVAARSLFGSCFVVCNEILPRWGVETVFVDGE-----DLSQWEEALSVPT------QAVFFETPSNPMQSLVDIAAVSE 179 (403)
T ss_pred EEEEccCCcchHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcCc------eEEEEECCCCCCCeecCHHHHHH
Confidence 78888877644333 334457788888743 8999999987643 37888999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|++++||++|+.+...-| +-. .+|.++.++||++..+-
T Consensus 180 la~~~g~~vivD~a~a~~~~~~~----~~~---gaDivv~S~tK~l~g~g 222 (403)
T PRK07810 180 LAHAAGAKVVLDNVFATPLLQRG----LPL---GADVVVYSGTKHIDGQG 222 (403)
T ss_pred HHHHcCCEEEEECCCCccccCCh----hhc---CCcEEEccCCceecCCc
Confidence 99999999999999987654322 111 36999999999987643
No 158
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.29 E-value=8.6e-11 Score=120.18 Aligned_cols=146 Identities=10% Similarity=0.044 Sum_probs=112.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.++++.|.+ ..++|+||+.|+..++..... ++.
T Consensus 67 ~~Le~~lA~leg~~-----------------------~al~~~sG~~Ai~~al~~ll~-------------------~GD 104 (431)
T PRK08248 67 DVFEKRIAALEGGI-----------------------GALAVSSGQAAITYSILNIAS-------------------AGD 104 (431)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence 67788899988755 369999999999888865422 345
Q ss_pred EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|...... +...|.+++.|+. .|+++|+++|++. +.+|+++.+++++|.+-|+++|++
T Consensus 105 ~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~-----~d~e~l~~ai~~~------tklV~l~sp~NPtG~v~di~~I~~ 173 (431)
T PRK08248 105 EIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP-----SDPENFEAAITDK------TKALFAETIGNPKGDVLDIEAVAA 173 (431)
T ss_pred EEEEccCchhhHHHHHHHHHHhCCEEEEEECC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHH
Confidence 788888887654443 3346778888876 3889999988643 347778889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|++++||++|+.+....| . .. .+|.++.++|||++.|-
T Consensus 174 la~~~gi~vIvD~t~a~~~~~~p-l---~~---gaDivv~S~tK~lgg~g 216 (431)
T PRK08248 174 IAHEHGIPLIVDNTFASPYLLRP-I---EH---GADIVVHSATKFIGGHG 216 (431)
T ss_pred HHHHcCCEEEEeCCCCccccCCh-h---Hc---CCCEEEEcCccccCCCC
Confidence 99999999999999986543332 1 12 37999999999998774
No 159
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.29 E-value=6.1e-11 Score=121.91 Aligned_cols=158 Identities=11% Similarity=0.005 Sum_probs=110.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.+++++|.+ ..+++++|+.|++.++.+. . ++.
T Consensus 125 ~~le~~lA~l~gae-----------------------~alvv~sg~aAi~l~l~~l-~-------------------~Gd 161 (454)
T TIGR00474 125 SHVEGLLCELTGAE-----------------------DALVVNNNAAAVLLALNTL-A-------------------KGK 161 (454)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHh-C-------------------CcC
Confidence 77889999999986 1477888999987777431 1 234
Q ss_pred EEEecCCCch------HHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC--cc--cccc
Q psy1596 244 VAYCSDQAHS------SVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG--AC--AFDN 313 (375)
Q Consensus 244 vV~~S~~aH~------Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~--tG--avDp 313 (375)
.|++|+..|. ++...+...|.+++.++++ +..|+++++++|.+++ .+|+.+..++. .| .+-|
T Consensus 162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T------~lv~~~h~sN~~~~G~~~~~d 233 (454)
T TIGR00474 162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENT------ALLLKVHTSNYRIVGFTEEVS 233 (454)
T ss_pred EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCC------EEEEEEccCcccccCCCCCCC
Confidence 7888887763 3333445568888888764 3468999999997653 35666666654 46 5789
Q ss_pred HHHHHHHHHhcCCEEEEecccccCc-------ccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSS-------FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~-------~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+++|+++|+++|+.++||++.|... .-.|....... ..||.+++++|||++.|. +|+++
T Consensus 234 l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~--~GaDiv~fSg~K~LgGp~-~G~i~ 299 (454)
T TIGR00474 234 IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIA--AGVDLVTFSGDKLLGGPQ-AGIIV 299 (454)
T ss_pred HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhH--cCCCEEEecCccccCCCe-EEEEE
Confidence 9999999999999999998744310 01111111111 147999999999999995 67653
No 160
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.28 E-value=7.7e-11 Score=120.70 Aligned_cols=146 Identities=12% Similarity=0.056 Sum_probs=110.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++.|.+ ..+++++|+.|+..++.+... ++.
T Consensus 72 ~~Le~~lA~l~g~~-----------------------~av~~sSG~aAi~~al~all~-------------------~Gd 109 (436)
T PRK07812 72 DVVEQRIAALEGGV-----------------------AALLLASGQAAETFAILNLAG-------------------AGD 109 (436)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEEccHHHHHHHHHHHHhC-------------------CCC
Confidence 67788899988876 269999999998888865422 345
Q ss_pred EEEecCCCchHHHHHHH--H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL--I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~--l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+....+. + .+.+++.++ +. -|+++++++|++. +.+|++...++++|.+-|+++|++
T Consensus 110 ~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~---~d~e~l~~ai~~~------tklV~ie~~sNp~G~v~Dl~~I~~ 179 (436)
T PRK07812 110 HIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP---DDLDAWRAAVRPN------TKAFFAETISNPQIDVLDIPGVAE 179 (436)
T ss_pred EEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC---CCHHHHHHhCCCC------CeEEEEECCCCCCCeecCHHHHHH
Confidence 67888888877665442 2 355666654 22 3899999888643 347888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+|+++|++++||++++.+....| ... .+|.++.++|||++.+
T Consensus 180 la~~~gi~liVD~t~a~~~~~~p----l~~---GaDivv~S~tK~lgg~ 221 (436)
T PRK07812 180 VAHEAGVPLIVDNTIATPYLIRP----LEH---GADIVVHSATKYLGGH 221 (436)
T ss_pred HHHHcCCEEEEECCCcccccCCc----hhc---CCCEEEEecccccCCC
Confidence 99999999999999987654322 112 4799999999998754
No 161
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.28 E-value=7.3e-11 Score=119.48 Aligned_cols=146 Identities=14% Similarity=0.019 Sum_probs=111.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..+++++|+.|+..++.+... ++.
T Consensus 67 ~~le~~lA~l~g~~-----------------------~~i~~ssG~~Ai~~~l~all~-------------------~GD 104 (398)
T PRK08249 67 QAFEEKVRILEGAE-----------------------AATAFSTGMAAISNTLYTFLK-------------------PGD 104 (398)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEeCChHHHHHHHHHHhcC-------------------CCC
Confidence 78889999998865 258888999888877765421 345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+..... ...|.+++.++. .|+++++++|++. +.+|+++.+++++|.+-|+++|++
T Consensus 105 ~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~-----~d~e~l~~~i~~~------tklV~ie~p~NPtg~v~dl~~I~~ 173 (398)
T PRK08249 105 RVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET-----GDHEQIEAEIAKG------CDLLYLETPTNPTLKIVDIERLAA 173 (398)
T ss_pred EEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCccCCHHHHHH
Confidence 7899999998765543 234666665543 5899999998653 347888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|++++||++|+.+....| .. ..+|.++.+++|+++.+-
T Consensus 174 la~~~gi~livD~t~a~~~~~~~----l~---~~~Divv~S~sK~l~g~~ 216 (398)
T PRK08249 174 AAKKVGALVVVDNTFATPINQNP----LA---LGADLVIHSATKFLSGHA 216 (398)
T ss_pred HHHHcCCEEEEECCcCccccCCc----hh---hCCCEEeccCceecCCCC
Confidence 99999999999999986543221 11 147999999999988654
No 162
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.28 E-value=1e-10 Score=117.24 Aligned_cols=167 Identities=17% Similarity=0.078 Sum_probs=121.0
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..|++. ++...++|+|+++++..++.+...
T Consensus 66 ~G~~~lr~~ia~~~~~~~~~~~-------------------~~~~i~it~G~~~al~~~~~~~~~--------------- 111 (384)
T PRK06348 66 GGDVELIEEIIKYYSKNYDLSF-------------------KRNEIMATVGACHGMYLALQSILD--------------- 111 (384)
T ss_pred CCcHHHHHHHHHHHHHHhCCCC-------------------ChhhEEEcCChHHHHHHHHHHhcC---------------
Confidence 3556677888999988888763 345689999999998877765432
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|+++..++.....++...+.+++.+|.+ +++.+|+++|++++++. +.+|+.+.++++||.+
T Consensus 112 ----~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~ 181 (384)
T PRK06348 112 ----PGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSK------TKAIILNSPNNPTGAVFSK 181 (384)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcC------ccEEEEeCCCCCCCcCCCH
Confidence 34578899999999999888778888888863 45679999999988643 2356666799999987
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+.+++|+++|++++++|++|.+|+....-.+ .... +.+...-..+.-++.|.++.|
T Consensus 182 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~vi~~~SfSK~~~l~ 239 (384)
T PRK06348 182 ETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMAT-LAGMPERTITFGSFSKDFAMT 239 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEecccccceeCCCccchhh-cCCCcCcEEEEecchhccCCc
Confidence 5688999999999999999999987543111 0111 111111124556889988644
No 163
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.28 E-value=1.5e-10 Score=113.34 Aligned_cols=157 Identities=13% Similarity=0.034 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
.+..++.+.+++++|.+ ..+++++|+++++.++.+...
T Consensus 61 ~~~~~l~~~la~~~~~~-----------------------~~i~~~~G~~~~~~~l~~~~~------------------- 98 (360)
T TIGR00858 61 PLHEELEEELAEWKGTE-----------------------AALLFSSGYLANVGVISALVG------------------- 98 (360)
T ss_pred HHHHHHHHHHHHHhCCC-----------------------CEEEECchHHHHHHHHHHhCC-------------------
Confidence 33466778888887754 247777778888766543321
Q ss_pred CceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
++..|++++..|.+...++.+.+.+++.++. +|++.|++.+++... ..+.+|+.....+.+|.+.++++|.++
T Consensus 99 ~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~--~~~~~v~~~~~~~~~G~~~~~~~i~~l 171 (360)
T TIGR00858 99 KGDLILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNRG--ERRKLIVTDGVFSMDGDIAPLPQLVAL 171 (360)
T ss_pred CCCEEEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHccc--CCCeEEEEeCCccCCCCCcCHHHHHHH
Confidence 3457889999999999998888888887763 689999999875321 123466666667889999999999999
Q ss_pred HHhcCCEEEEecccccCcccch--hhhhhhcCC--CcccEEEEcCcccCCC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICP--EFRKWLAGV--EYANSIAFNPSKWLMV 367 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gi--e~aDSi~~d~HK~l~~ 367 (375)
|+++|+++++|++|+.+..-.. .... ..++ ...|.+..++||+++.
T Consensus 172 ~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~ 221 (360)
T TIGR00858 172 AERYGAWLMVDDAHGTGVLGEDGRGTLE-HFGLKPEPVDIQVGTLSKALGS 221 (360)
T ss_pred HHHcCcEEEEECcccccCcCCCCCchHH-hcCCCccCCcEEEEechhhhhc
Confidence 9999999999999985432100 0011 1222 2458888999998865
No 164
>PRK07324 transaminase; Validated
Probab=99.28 E-value=5.4e-11 Score=119.01 Aligned_cols=142 Identities=13% Similarity=-0.002 Sum_probs=103.6
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCc
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSL 277 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~m 277 (375)
...++|+|+++++..++.+... ++..|+++..+|.++...++..|.+++.+|+++ ++.+
T Consensus 81 ~~vi~t~G~~~al~~~~~~l~~-------------------~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~ 141 (373)
T PRK07324 81 ENILQTNGATGANFLVLYALVE-------------------PGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLP 141 (373)
T ss_pred hhEEEcCChHHHHHHHHHHhCC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCC
Confidence 3578999999999888765432 345788899999998888888888999999864 3568
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA 354 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a 354 (375)
|+++|++++.+. +.+|+.+.++++||.+-+ +++|+++|+++|+++++|++|..... .+.........++
T Consensus 142 d~~~l~~~~~~~------~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~-~~~~~s~~~~~~~- 213 (373)
T PRK07324 142 DLDELRRLVRPN------TKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDE-DGSTPSIADLYEK- 213 (373)
T ss_pred CHHHHHHhCCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccc-CCCCCChhhccCC-
Confidence 999999887543 347888899999998865 99999999999999999999976432 1111011111111
Q ss_pred cEEEEcCcccCCCC
Q psy1596 355 NSIAFNPSKWLMVH 368 (375)
Q Consensus 355 DSi~~d~HK~l~~P 368 (375)
.-..-++.|.++.|
T Consensus 214 ~I~~~s~SK~~~~~ 227 (373)
T PRK07324 214 GISTNSMSKTYSLP 227 (373)
T ss_pred EEEEecchhhcCCc
Confidence 13345888987644
No 165
>PRK05968 hypothetical protein; Provisional
Probab=99.28 E-value=1.1e-10 Score=117.77 Aligned_cols=150 Identities=12% Similarity=0.113 Sum_probs=112.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.+++++|.+ ..+++++|+.|+..++.+... ++.
T Consensus 66 ~~le~~lA~l~g~~-----------------------~av~~~sG~~Ai~~al~al~~-------------------~Gd 103 (389)
T PRK05968 66 RAFEEMLAKLEGAE-----------------------DARGFASGMAAISSTVLSFVE-------------------PGD 103 (389)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence 77888999998876 247788899888877754321 345
Q ss_pred EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+... .+...|.+++.++.+ |+++|++++. . +.+|++..+++.++.+.|+++|++
T Consensus 104 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~-~------tklV~ie~pt~~~~~~~dl~~i~~ 171 (389)
T PRK05968 104 RIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR-----DEEAVAKALP-G------AKLLYLESPTSWVFELQDVAALAA 171 (389)
T ss_pred EEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC-----CHHHHHHhcc-c------CCEEEEECCCCCCCcHHHHHHHHH
Confidence 68888888876543 334457788887653 8899998873 2 236777888899999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM 374 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l 374 (375)
+|+++|+.++||++|+.+...-| ...| +|.++.++||++..|-+ .|++
T Consensus 172 la~~~gi~vivD~a~a~~~~~~p----~~~g---~Divv~S~tK~l~g~~~~~gG~i 221 (389)
T PRK05968 172 LAKRHGVVTMIDNSWASPVFQRP----ITLG---VDLVIHSASKYLGGHSDTVAGVV 221 (389)
T ss_pred HHHHcCCEEEEECCCcchhccCc----hhcC---CcEEEeeccccccCCCCeEEEEE
Confidence 99999999999999987643222 1123 69999999999998754 5654
No 166
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.28 E-value=9.1e-11 Score=117.25 Aligned_cols=167 Identities=14% Similarity=0.075 Sum_probs=118.4
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++.+.+|+++.+|.+. +.. ..++|+|+++++..++.+..+
T Consensus 67 ~G~~~lr~~ia~~~~~~~~~~~-------------------~~~~~vi~t~G~~~~l~~~~~~~~~-------------- 113 (383)
T TIGR03540 67 EGMLAYRQAVADWYKRRFGVEL-------------------DPETEVLSLIGSKEGIAHIPLAFVN-------------- 113 (383)
T ss_pred CCCHHHHHHHHHHHHHhhCCCC-------------------CCCCeEEECCCcHHHHHHHHHHhCC--------------
Confidence 3556777888999998888863 222 467788889987776654321
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
++..|++++.++..+..+++..|.+++.||.++ ++.+|+++|++++.+. +.+|+.+.++|+||.+-+
T Consensus 114 -----~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~~~~ 182 (383)
T TIGR03540 114 -----PGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGAVAP 182 (383)
T ss_pred -----CCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCccCC
Confidence 345799999999888888888888999999863 3668999999988542 447777788999999855
Q ss_pred ---HHHHHHHHHhcCCEEEEecccccCccc---chhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 314 ---LEELGPICEKEGLWLHVDAAYAGSSFI---CPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 314 ---l~eI~~ia~~~~iwlHVDaA~gg~~~~---~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++|+++|++|++++++|.+|+-...- .+.+.. +.+...-....-++.|.++.|
T Consensus 183 ~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~-~~~~~~~~i~~~SfSK~~g~~ 242 (383)
T TIGR03540 183 LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLE-VDGAKDVGIEFHSLSKTYNMT 242 (383)
T ss_pred HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCccc-CCCcccCEEEEEecccccCCc
Confidence 899999999999999999999753221 011111 111111234456777987543
No 167
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.28 E-value=8.9e-11 Score=118.84 Aligned_cols=146 Identities=11% Similarity=0.033 Sum_probs=111.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+. .+++++|+.++..++.+... ++.
T Consensus 68 ~~Le~~lA~l~G~~~-----------------------~~~~~sG~~Ai~~~l~~~l~-------------------~Gd 105 (398)
T PRK07504 68 DMFEKRMCALEGAED-----------------------ARATASGMAAVTAAILCQVK-------------------AGD 105 (398)
T ss_pred HHHHHHHHHHhCCCe-----------------------eeEecCHHHHHHHHHHHHhC-------------------CCC
Confidence 678888999999872 36788999998766654221 345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...+.+..... ...+.+++.++ .+|+++++++|++. +.+|+++.+++++|.+-|+++|.+
T Consensus 106 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~~~------tklV~lesp~NptG~v~dl~~I~~ 174 (398)
T PRK07504 106 HVVAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVRPN------TKVFFLESPTNPTLEVIDIAAVAK 174 (398)
T ss_pred EEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcCcC------ceEEEEECCCCCCcEecCHHHHHH
Confidence 7888888887765543 23466777764 27999999998653 448889999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|++++||++|+.+....|. -. .+|.++.++|||++.+-
T Consensus 175 la~~~gi~lvvD~a~a~~~~~~~~----~~---gaDivv~S~sK~l~g~g 217 (398)
T PRK07504 175 IANQAGAKLVVDNVFATPLFQKPL----EL---GAHIVVYSATKHIDGQG 217 (398)
T ss_pred HHHHcCCEEEEECCccccccCCch----hh---CCCEEEeeccccccCCc
Confidence 999999999999999876443221 11 37999999999997653
No 168
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.27 E-value=4.4e-10 Score=113.27 Aligned_cols=190 Identities=13% Similarity=0.030 Sum_probs=129.4
Q ss_pred CchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe
Q psy1596 126 PFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ 205 (375)
Q Consensus 126 ~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft 205 (375)
+.+++...+.+.+..... ..+.+..+.|......++.+.|++++|.+ ..++.
T Consensus 61 ~~p~v~~a~~~~~~~~~~-----~~~~s~~~~g~~~~~~~l~~~la~~~g~~-----------------------~~~~~ 112 (407)
T PRK09064 61 QHPKVIEAMIEALDRCGA-----GAGGTRNISGTNHYHVELERELADLHGKE-----------------------AALVF 112 (407)
T ss_pred CCHHHHHHHHHHHHHcCC-----CCCCcCcCccCHHHHHHHHHHHHHHhCCC-----------------------cEEEE
Confidence 334555555555444322 11233444455555688889999998855 24777
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHH
Q psy1596 206 TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEA 285 (375)
Q Consensus 206 sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~a 285 (375)
++|++||..++..++.. .++.+|+.+...|.|+..++.+.+.+++.++. .|+++|++.
T Consensus 113 ~sG~~an~~ai~~l~~~-----------------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~ 170 (407)
T PRK09064 113 TSGYVSNDATLSTLAKL-----------------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEEL 170 (407)
T ss_pred CcHHHHHHHHHHHHhCC-----------------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHH
Confidence 88999999888766431 02346777888899998888877777766664 378999999
Q ss_pred HHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcCc
Q psy1596 286 IERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNPS 362 (375)
Q Consensus 286 I~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~H 362 (375)
++.... ..+.+|+.+...+++|.+.|+++|.++|+++|++++||+||+.+.+ .+.... ...++ +..|.++.+++
T Consensus 171 l~~~~~--~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~-g~~g~g~~~~~~~~~~~div~~t~s 247 (407)
T PRK09064 171 LAAADP--DRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMY-GPRGGGIAERDGLMDRIDIIEGTLA 247 (407)
T ss_pred HHhccC--CCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccccc-CCCCCChHHhcCCCCCCeEEEEecc
Confidence 874321 1255788888889999999999999999999999999999984421 111100 11222 35688888999
Q ss_pred ccCCCC
Q psy1596 363 KWLMVH 368 (375)
Q Consensus 363 K~l~~P 368 (375)
|.++.+
T Consensus 248 Ka~g~~ 253 (407)
T PRK09064 248 KAFGVM 253 (407)
T ss_pred hhhhcc
Confidence 987643
No 169
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.27 E-value=1.4e-10 Score=117.39 Aligned_cols=147 Identities=11% Similarity=0.081 Sum_probs=112.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++.|.+ ..++++||+.|+..++.+... ++.
T Consensus 67 ~~Le~~iA~~~g~~-----------------------~~l~~~sG~~Ai~~al~~ll~-------------------~Gd 104 (400)
T PRK06234 67 TEVENKLALLEGGE-----------------------AAVVAASGMGAISSSLWSALK-------------------AGD 104 (400)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHHHHHhC-------------------CCC
Confidence 67778888888754 258999999998777654321 345
Q ss_pred EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+.... +...|.+++.++.+ |+++|+++|++. +.+|+.+.+++++|.+-|+++|++
T Consensus 105 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-----d~e~l~~~i~~~------tklI~iesP~NPtG~v~dl~~I~~ 173 (400)
T PRK06234 105 HVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-----NLEEVRNALKAN------TKVVYLETPANPTLKVTDIKAISN 173 (400)
T ss_pred EEEEecCccchHHHHHHHHHhhCCeEEEEECCC-----CHHHHHHHhccC------CeEEEEECCCCCCCCcCCHHHHHH
Confidence 788888887665443 34567788888753 899999998653 347888899999999999999999
Q ss_pred HHHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++ |+++++|++|+.+....|. +. .+|.++.+++|++..+-+
T Consensus 174 la~~~~~~i~livDea~~~~~~~~~l------~~-g~Divv~S~sK~l~g~g~ 219 (400)
T PRK06234 174 IAHENNKECLVFVDNTFCTPYIQRPL------QL-GADVVVHSATKYLNGHGD 219 (400)
T ss_pred HHHhcCCCCEEEEECCCCchhcCCch------hh-CCcEEEeeccccccCCCC
Confidence 99997 9999999999876442221 11 479999999999987653
No 170
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.27 E-value=7.4e-11 Score=121.56 Aligned_cols=188 Identities=14% Similarity=0.015 Sum_probs=117.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHH-----HHHhhc--
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEA-----IRKYQQ-- 229 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~-----~~~~~~-- 229 (375)
....++|..+++...++||.+. .-+=--+||.||+.+.++..... +.+.+.
T Consensus 91 ~~~d~ie~l~~~ra~~lf~a~~----------------------anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~ 148 (493)
T PRK13580 91 QNVDTVEWEAAEHAKELFGAEH----------------------AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKT 148 (493)
T ss_pred chHHHHHHHHHHHHHHHhCCCc----------------------ccccCCCcHHHHHHHHHHHhcccccCcchhcccccc
Confidence 3467888999999999999872 11334578999998888766420 000000
Q ss_pred ----cCCcchhh-hhcCceEEEec---CCCchHHHHHHHHcC--CeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEE
Q psy1596 230 ----SHPELEHA-EINSRLVAYCS---DQAHSSVEKAGLIGL--VKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFF 298 (375)
Q Consensus 230 ----~~~~~~~~-~~~~~~vV~~S---~~aH~Sv~kaa~lg~--~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~ 298 (375)
...+|+.- ....+..|+.- .-.|.+.-....+.+ .+.+..++| ++|.+|.++|++.+.+.+ | .
T Consensus 149 ~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~-----p-l 222 (493)
T PRK13580 149 VNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFK-----P-L 222 (493)
T ss_pred ccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcC-----C-E
Confidence 00011100 00011233222 223333322222222 345556665 579999999999998653 4 4
Q ss_pred EEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 299 Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
|+++..++. +.+-|+++|+++|+++|.+++||+||+.+.+....+......+..+|.++.++||||+.|.| |++
T Consensus 223 vii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I 296 (493)
T PRK13580 223 ILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLV 296 (493)
T ss_pred EEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEE
Confidence 555666555 55779999999999999999999999998764222211122345789999999999988997 443
No 171
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.27 E-value=1.7e-10 Score=116.39 Aligned_cols=144 Identities=17% Similarity=0.179 Sum_probs=111.9
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++.+.+|+.+..|++. ... ..++|+|++++...++.+..+
T Consensus 71 ~G~~~lR~~ia~~l~~~~~~~~-------------------~~~~~I~it~G~~~al~~~~~~l~~-------------- 117 (403)
T PRK08636 71 KGIYKLRLAICNWYKRKYNVDL-------------------DPETEVVATMGSKEGYVHLVQAITN-------------- 117 (403)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCeEEECCChHHHHHHHHHHhCC--------------
Confidence 5677788899999999888773 233 488999999988777765432
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCcccc-
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAF- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGav- 311 (375)
++..|++.+.++..+...+...|.+++.||.+ +++.+|+++|.+.+++..++ +..+.+|+.+.++++||.+
T Consensus 118 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~ 192 (403)
T PRK08636 118 -----PGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATV 192 (403)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccC
Confidence 35689999999999888888888899999874 45789998775555443322 2235688888889999987
Q ss_pred --ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 --DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+.+++|+++|++|++||++|.+|+-..
T Consensus 193 s~~~~~~l~~~a~~~~~~II~De~Y~~l~ 221 (403)
T PRK08636 193 EKSFYERLVALAKKERFYIISDIAYADIT 221 (403)
T ss_pred CHHHHHHHHHHHHHcCcEEEEeccchhhc
Confidence 667889999999999999999998653
No 172
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.26 E-value=1.2e-10 Score=119.26 Aligned_cols=135 Identities=10% Similarity=0.088 Sum_probs=105.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..++|+|||+|++.++.++...+..+. ++.++.
T Consensus 66 ~~fe~~lA~~~g~~-----------------------~~v~~~sGt~al~~aL~al~~~~~~~~----------~~~pGd 112 (438)
T PRK15407 66 DAFEKKLAEFLGVR-----------------------YALLVNSGSSANLLAFSALTSPKLGDR----------ALKPGD 112 (438)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHHhhcccccc----------CCCCCC
Confidence 66778888888875 268999999999999887643221100 112456
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
.|+++..+|.+...++...|.+++.++++ +++.+|+++|+++|.+. +.+|+++. ..|...++++|.++|+
T Consensus 113 ~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~------tkaVi~~~---~~G~p~dl~~I~~la~ 183 (438)
T PRK15407 113 EVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSPK------TKAIMIAH---TLGNPFDLAAVKAFCD 183 (438)
T ss_pred EEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcC------CeEEEEeC---CCCChhhHHHHHHHHH
Confidence 89999999999999988888899999886 57889999999998653 23555553 3567789999999999
Q ss_pred hcCCEEEEecccccCccc
Q psy1596 323 KEGLWLHVDAAYAGSSFI 340 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~~~ 340 (375)
++|+++++|+||+.++..
T Consensus 184 ~~gi~vIeDaa~a~G~~~ 201 (438)
T PRK15407 184 KHNLWLIEDNCDALGSTY 201 (438)
T ss_pred HCCCEEEEECccchhhhc
Confidence 999999999999988754
No 173
>PLN02822 serine palmitoyltransferase
Probab=99.26 E-value=3.4e-10 Score=117.32 Aligned_cols=187 Identities=13% Similarity=0.069 Sum_probs=127.8
Q ss_pred chhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC
Q psy1596 127 FQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT 206 (375)
Q Consensus 127 ~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts 206 (375)
.+++...+.+.+++... ....++.+-|+...+.++.+.|++++|.+ ...++++
T Consensus 125 ~~~i~ea~~~al~~~G~-----g~~g~r~~yg~~~~~~~Lee~La~~~~~~----------------------~~i~~s~ 177 (481)
T PLN02822 125 NEKIKESCTSALEKYGV-----GSCGPRGFYGTIDVHLDCETKIAKFLGTP----------------------DSILYSY 177 (481)
T ss_pred CHHHHHHHHHHHHHhCC-----CCcccCccccCHHHHHHHHHHHHHHhCCC----------------------CEEEECC
Confidence 34455555555554322 11233445577777789999999999866 2355665
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHH
Q psy1596 207 TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAI 286 (375)
Q Consensus 207 GGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI 286 (375)
|++ ++..++.+... ++.+|++....|+++..++.+.+.+++.++.+ |.+.|++.+
T Consensus 178 G~~-a~~sai~a~~~-------------------~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l 232 (481)
T PLN02822 178 GLS-TIFSVIPAFCK-------------------KGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTL 232 (481)
T ss_pred HHH-HHHHHHHHhCC-------------------CCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHH
Confidence 555 66555543211 34578899999999999999988899999876 667788777
Q ss_pred HHhhhc----CCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC--CcccEEE
Q psy1596 287 ERDKKK----HLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV--EYANSIA 358 (375)
Q Consensus 287 ~~~~~~----g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi--e~aDSi~ 358 (375)
++..+. .....+|+.....+++|.+-|+++|+++|++||++|++|.+|+.+.+ -+..+. ...++ +..|.++
T Consensus 233 ~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvl-G~~G~G~~e~~~v~~~~~dii~ 311 (481)
T PLN02822 233 EKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVL-GKSGRGLSEHFGVPIEKIDIIT 311 (481)
T ss_pred HHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCChHHHcCCCCCCCeEEE
Confidence 653322 11224777777778899999999999999999999999999985532 111110 11233 3679999
Q ss_pred EcCcccCC
Q psy1596 359 FNPSKWLM 366 (375)
Q Consensus 359 ~d~HK~l~ 366 (375)
.++.|.++
T Consensus 312 ~s~sKalg 319 (481)
T PLN02822 312 AAMGHALA 319 (481)
T ss_pred ecchhhhh
Confidence 99999986
No 174
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.26 E-value=1.5e-10 Score=116.72 Aligned_cols=147 Identities=11% Similarity=0.069 Sum_probs=111.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.++|+++.|.+ ..++++||++++..++.+... ++.
T Consensus 55 ~~L~~~lA~l~g~~-----------------------~~i~~~sg~~Ai~~~l~~l~~-------------------~GD 92 (386)
T PRK08045 55 DVVQRALAELEGGA-----------------------GAVLTNTGMSAIHLVTTVFLK-------------------PGD 92 (386)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHHcC-------------------CCC
Confidence 78889999998743 379999999988877764321 345
Q ss_pred EEEecCCCchHHHHHH-H---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG-L---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa-~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..|.+....+ . .++.++..++ ..|++++++++++. +.+|+.+.+++++|.+-|+++|++
T Consensus 93 ~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-----~~d~e~l~~~l~~~------tklV~l~sP~NPtG~v~di~~I~~ 161 (386)
T PRK08045 93 LLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-----QGDEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICH 161 (386)
T ss_pred EEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-----CCCHHHHHHhcccC------CeEEEEECCCCCCCEecCHHHHHH
Confidence 7889999987655433 2 2444555553 26899999988653 347888899999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|++++||++|+.+....| .-. .+|.+..++|||++.+-+
T Consensus 162 ia~~~g~~vivDeay~~~~~~~p----l~~---gaDivv~S~tK~l~G~~d 205 (386)
T PRK08045 162 LAREAGAVSVVDNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSD 205 (386)
T ss_pred HHHHcCCEEEEECCCCccccCCc----hhh---CCCEEEeecceeccCCCC
Confidence 99999999999999987754222 111 369999999999987765
No 175
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.26 E-value=9.1e-11 Score=122.44 Aligned_cols=137 Identities=9% Similarity=-0.045 Sum_probs=105.9
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++++.+|+.+..+... ++...++|+|+++++..++.+..+
T Consensus 185 ~G~~~lReaia~~~~~~~~~~~-------------------~~~~I~it~G~~eal~~~~~~l~~--------------- 230 (517)
T PRK13355 185 KGLFSARKAIMQYAQLKGLPNV-------------------DVDDIYTGNGVSELINLSMSALLD--------------- 230 (517)
T ss_pred cChHHHHHHHHHHHHhcCCCCC-------------------ChhHEEEeCcHHHHHHHHHHHhCC---------------
Confidence 3555666666666655432221 334689999999998877765422
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN- 313 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp- 313 (375)
++..|++++.++..+...+.+.|.+++.+++++ ++.+|+++|++++.+. +.+|+.+.++++||.+-+
T Consensus 231 ----~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~------~k~i~i~nP~NPTG~v~~~ 300 (517)
T PRK13355 231 ----DGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSR------TKAIVIINPNNPTGALYPR 300 (517)
T ss_pred ----CCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCcCH
Confidence 345789999999999988888888999998864 5789999999988643 347788889999999855
Q ss_pred --HHHHHHHHHhcCCEEEEecccccC
Q psy1596 314 --LEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 314 --l~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
+++|+++|++|++||++|.+|.-.
T Consensus 301 ~~l~~i~~~a~~~~~~ii~DE~Y~~~ 326 (517)
T PRK13355 301 EVLQQIVDIAREHQLIIFSDEIYDRL 326 (517)
T ss_pred HHHHHHHHHHHHcCcEEEEehhhhhh
Confidence 899999999999999999999854
No 176
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.26 E-value=1.1e-10 Score=117.94 Aligned_cols=132 Identities=11% Similarity=0.022 Sum_probs=101.3
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCC
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLS 276 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~ 276 (375)
..++++||++|+..++.+..+ ++..|++++..|.+....+ ...|.+++.++.+
T Consensus 78 ~~~~~~sG~~Ai~~~l~all~-------------------~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~---- 134 (394)
T PRK09028 78 GTALYPSGAAAISNALLSFLK-------------------AGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM---- 134 (394)
T ss_pred cEEEECCHHHHHHHHHHHHhC-------------------CCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC----
Confidence 368999999999888765422 3457888888886776543 1245666666543
Q ss_pred cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccE
Q psy1596 277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANS 356 (375)
Q Consensus 277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDS 356 (375)
+.+.|++++++. +.+|+++.+++++|.+.||++|+++|+++|+|+.||++|+.+...-|. -. .||.
T Consensus 135 -~~e~l~~~l~~~------TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl----~~---GaDi 200 (394)
T PRK09028 135 -IGEGIRELIRPN------TKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPF----EM---GVDI 200 (394)
T ss_pred -CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCcc----cc---CceE
Confidence 457788887543 448999999999999999999999999999999999999987543332 12 3799
Q ss_pred EEEcCcccCCCCC
Q psy1596 357 IAFNPSKWLMVHF 369 (375)
Q Consensus 357 i~~d~HK~l~~P~ 369 (375)
+..+.|||++.+-
T Consensus 201 vv~S~tK~l~Gh~ 213 (394)
T PRK09028 201 SIQAATKYIVGHS 213 (394)
T ss_pred EEEeCCeEecCCC
Confidence 9999999999883
No 177
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.25 E-value=1.7e-10 Score=116.74 Aligned_cols=150 Identities=9% Similarity=0.020 Sum_probs=116.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.|+++-|-. ..+++++|+.|+..++.+... ++.
T Consensus 65 ~~le~~la~LEg~~-----------------------~a~~~~SGmaAi~~~~~~ll~-------------------~GD 102 (395)
T PRK08114 65 FSLQEAMCELEGGA-----------------------GCALYPCGAAAVANAILAFVE-------------------QGD 102 (395)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEEhHHHHHHHHHHHHHcC-------------------CCC
Confidence 66777888875433 478889999998887765421 345
Q ss_pred EEEecCCCchHHHHHHH--H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL--I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~--l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+..+.+. + .|++++.++. .|.+.++++|+++ +.+|.+...++++|.+-||++|++
T Consensus 103 ~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-----~d~~~l~~~l~~~------TrlV~~EtpsNp~~~v~DI~~Ia~ 171 (395)
T PRK08114 103 HVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP-----LIGADIAKLIQPN------TKVVFLESPGSITMEVHDVPAIVA 171 (395)
T ss_pred EEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-----CCHHHHHHhcCCC------ceEEEEECCCCCCCEeecHHHHHH
Confidence 78899999988887652 2 4678888764 3788999998754 348999999999999999999999
Q ss_pred HHHhcC--CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC--ccee
Q psy1596 320 ICEKEG--LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF--DCTA 373 (375)
Q Consensus 320 ia~~~~--iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~--~~g~ 373 (375)
+|++++ +.++||++|+.+..+-|. -.| ||.+..+.|||++.+- .+|+
T Consensus 172 ia~~~g~g~~lvVDnT~a~p~~~~pl----~~G---aDivv~S~tKyl~Ghsdv~~G~ 222 (395)
T PRK08114 172 AVRSVNPDAVIMIDNTWAAGVLFKAL----DFG---IDISIQAGTKYLVGHSDAMIGT 222 (395)
T ss_pred HHHHhCCCCEEEEECCCccccccCHH----HcC---CcEEEEcCcccccCCCcceeEE
Confidence 999984 999999999998654332 224 7999999999999995 4554
No 178
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.25 E-value=1.5e-10 Score=116.73 Aligned_cols=137 Identities=13% Similarity=0.070 Sum_probs=105.6
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++.+.+|+++.+|.+. .+...++|+|+++|+..++.+...
T Consensus 70 ~G~~~lr~~ia~~l~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~~~~--------------- 115 (402)
T PRK06107 70 NGTPALRKAIIAKLERRNGLHY-------------------ADNEITVGGGAKQAIFLALMATLE--------------- 115 (402)
T ss_pred CCCHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEeCCHHHHHHHHHHHhcC---------------
Confidence 4666777899999999888863 334689999999998887754211
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|++++.++.....++...+..++.++++ +++.+|+++|++++++. +.+|+.+.++++||.+
T Consensus 116 ----~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~ 185 (402)
T PRK06107 116 ----AGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVYSR 185 (402)
T ss_pred ----CCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCcCH
Confidence 34578898888777777776666677788874 34679999999988532 4467778899999976
Q ss_pred ccHHHHHHHHHhc-CCEEEEecccccC
Q psy1596 312 DNLEELGPICEKE-GLWLHVDAAYAGS 337 (375)
Q Consensus 312 Dpl~eI~~ia~~~-~iwlHVDaA~gg~ 337 (375)
+.+++|+++|+++ ++++++|.+|+-.
T Consensus 186 ~~~~~l~~~a~~~~~~~iI~De~y~~l 212 (402)
T PRK06107 186 AELRALADVLLRHPHVLVLTDDIYDHI 212 (402)
T ss_pred HHHHHHHHHHHHcCCeEEEEehhcccc
Confidence 5678889999998 9999999999753
No 179
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.25 E-value=1.9e-10 Score=118.85 Aligned_cols=145 Identities=14% Similarity=0.102 Sum_probs=113.1
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++++.+|+.+.+|.+.. . ++...++|+|+++++...+.+..+
T Consensus 86 ~G~~~LR~aiA~~l~~~~~~~~~---------v--------~~~~Iiit~Ga~~al~~l~~~l~~--------------- 133 (468)
T PLN02450 86 HGLPAFKNALAEFMSEIRGNKVT---------F--------DPNKLVLTAGATSANETLMFCLAE--------------- 133 (468)
T ss_pred CChHHHHHHHHHHHHHhhCCCCC---------c--------ChHHeEEccChHHHHHHHHHHhCC---------------
Confidence 46667778889999888775410 0 234578899999987766654432
Q ss_pred hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
++..|++++..+..+...+. ..|.+++.||++ +++.+|+++|++++++..+++..+.+|+.+.++|+||.+
T Consensus 134 ----pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s 209 (468)
T PLN02450 134 ----PGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTT 209 (468)
T ss_pred ----CCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccC
Confidence 35579999999988888776 578899999984 567889999999998755555556678888899999988
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
+.+++|.++|+++++|+++|.+|+..
T Consensus 210 ~e~l~~ll~~a~~~~~~iI~DE~Y~~~ 236 (468)
T PLN02450 210 RTELNLLVDFITAKNIHLISDEIYSGT 236 (468)
T ss_pred HHHHHHHHHHHHHCCcEEEEEcccccc
Confidence 56788899999999999999999864
No 180
>PRK08068 transaminase; Reviewed
Probab=99.24 E-value=1.7e-10 Score=115.65 Aligned_cols=168 Identities=11% Similarity=0.030 Sum_probs=118.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|..++++++.+|+.+.+|.+. ++. ..++|+||+++...++.+...
T Consensus 70 ~g~~~lr~aia~~~~~~~g~~~-------------------~~~~~i~it~G~~~~l~~~~~~~~~-------------- 116 (389)
T PRK08068 70 RGYPFLKEAAADFYKREYGVTL-------------------DPETEVAILFGGKAGLVELPQCLMN-------------- 116 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCccEEEcCCcHHHHHHHHHHhCC--------------
Confidence 4566777888888887778763 333 578899999987776543221
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
++..|++.+.++..+..++...|.+++.||+++ ++.+|+++|++++.+. +.+|+.+.++++||.+
T Consensus 117 -----~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPTG~~~s 185 (389)
T PRK08068 117 -----PGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNNPTGAVAT 185 (389)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCCcCC
Confidence 345789999999999888888889999999964 4678999999988542 3467777789999998
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc--CCCcccEEEEcCcccCCCC
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA--GVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~--gie~aDSi~~d~HK~l~~P 368 (375)
+.+++|+++|+++++++++|.||+-...-.......+. +...-.-+.-++.|.++.|
T Consensus 186 ~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~ 245 (389)
T PRK08068 186 KAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMA 245 (389)
T ss_pred HHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCc
Confidence 45678888999999999999999753211000000111 1111124566889987543
No 181
>PLN02271 serine hydroxymethyltransferase
Probab=99.24 E-value=1.1e-10 Score=121.24 Aligned_cols=169 Identities=11% Similarity=-0.054 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
.+++|..+++...++||.+. . ..+.-|---+||.||+.++++..+
T Consensus 192 iD~iE~la~era~~lF~~~~--------~----------~~gaNVQp~SGs~AN~aV~~ALl~----------------- 236 (586)
T PLN02271 192 IDQIERLCCERALAAFGLDS--------E----------KWGVNVQPYSCTSANFAVYTGLLL----------------- 236 (586)
T ss_pred HHHHHHHHHHHHHHHhCCcc--------c----------ccccceeeccHHHHHHHHHHHhcC-----------------
Confidence 45888999999999999872 0 011124445999999998876532
Q ss_pred hcCceEEEecCC---CchHHHH------HHHHcCCeEEEEe--cC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC
Q psy1596 239 INSRLVAYCSDQ---AHSSVEK------AGLIGLVKMRYIE--SD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT 306 (375)
Q Consensus 239 ~~~~~vV~~S~~---aH~Sv~k------aa~lg~~~v~~Vp--~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT 306 (375)
+++.|+..+. .|.+... .+...+..+..+| +| ++|.+|.++|++...+. .|.+|++..-+.
T Consensus 237 --PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~-----rPKLII~g~Say 309 (586)
T PLN02271 237 --PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDF-----RPKILICGGSSY 309 (586)
T ss_pred --CCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhc-----CCeEEEECchhc
Confidence 3456766544 4555421 1223344455555 64 67999999999955432 266676643222
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 307 GACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 307 ~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
. ..-|+++|++||+++|++++||+||..+.+....+. ..+.+||.++.+.||||..|.|..++
T Consensus 310 p--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~---sP~~~aDvvt~TTHKtLrGPrGG~I~ 372 (586)
T PLN02271 310 P--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECV---NPFDYCDIVTSTTHKSLRGPRGGIIF 372 (586)
T ss_pred c--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCC---CCCcCCcEEEeCCcccCCCCCceEEE
Confidence 2 667899999999999999999999999876443221 23456899999999999999994444
No 182
>PRK07683 aminotransferase A; Validated
Probab=99.24 E-value=4.8e-10 Score=112.53 Aligned_cols=167 Identities=13% Similarity=0.108 Sum_probs=121.6
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|..++++++.+|+.+..|++. ++. ..++|+|+++|+..++.+...
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~-------------------~~~~~I~~t~G~~~al~~~~~~l~~-------------- 111 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHY-------------------SPESEIIVTIGASEAIDIAFRTILE-------------- 111 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEeCChHHHHHHHHHHhCC--------------
Confidence 4567778888888888778763 233 689999999998877654321
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|+++..++.....++...|.+++.++.++ ++.+|+++|++.+.+. +.+|+.+.++++||.+
T Consensus 112 -----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~i~i~~p~NPtG~~~s~ 180 (387)
T PRK07683 112 -----PGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEK------TRCVVLPYPSNPTGVTLSK 180 (387)
T ss_pred -----CCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCH
Confidence 235788899888888888887888999999864 5678899999987643 3467778899999997
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++++|+++|+++|+++++|++|+....-.+ ..... .+...-.-+.-++.|.++.|
T Consensus 181 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~vi~~~s~SK~~~~p 238 (387)
T PRK07683 181 EELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHF-PEMREKTIVINGLSKSHSMT 238 (387)
T ss_pred HHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhc-cCCcCCeEEEeeccccccCc
Confidence 5699999999999999999999987532111 01111 01111135567899998866
No 183
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.24 E-value=2.2e-10 Score=114.60 Aligned_cols=167 Identities=14% Similarity=0.083 Sum_probs=117.6
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++.+.+|+.+.+|.+. ++. ..++|+|++++...++.+..+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~ii~t~G~~~~i~~~~~~~~~-------------- 115 (385)
T PRK09276 69 EGMLEFRKAVADWYKRRFGVEL-------------------DPETEVISLIGSKEGIAHIPLAFVN-------------- 115 (385)
T ss_pred CCcHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEccCcHHHHHHHHHHhCC--------------
Confidence 3456677888899988888753 222 367788999988776654322
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc-
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD- 312 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD- 312 (375)
++..|++++.++..+...++..|.+++.+|.++ .+.+|++++++.+.+. +.+|+.+.++|+||.+-
T Consensus 116 -----~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~ 184 (385)
T PRK09276 116 -----PGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGAVAD 184 (385)
T ss_pred -----CCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCCCCC
Confidence 345788999999888888888888999999853 4668999998887532 34777778999999984
Q ss_pred --cHHHHHHHHHhcCCEEEEecccccCccc---chhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 313 --NLEELGPICEKEGLWLHVDAAYAGSSFI---CPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 313 --pl~eI~~ia~~~~iwlHVDaA~gg~~~~---~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
.+++|+++|+++++|+++|.+|+....- .+.... +.+...-..+.-++.|.++.|
T Consensus 185 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~~ 244 (385)
T PRK09276 185 LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLE-VPGAKDVGIEFHSLSKTYNMT 244 (385)
T ss_pred HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhc-cCCCcCCEEEEecchhhcCCc
Confidence 4789999999999999999999864321 111111 111111134456788987544
No 184
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.23 E-value=9.5e-10 Score=111.11 Aligned_cols=188 Identities=13% Similarity=0.051 Sum_probs=128.0
Q ss_pred hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596 128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT 207 (375)
Q Consensus 128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG 207 (375)
+++...+.+.+.+-.. ..+.+....++...+.++.+.|++++|.+ ..++.++
T Consensus 62 p~v~~a~~~~~~~~~~-----~~~~s~~~~~~~~~~~~le~~la~~~g~~-----------------------~~~~~~S 113 (406)
T PRK13393 62 PAVLAAMHEALDTCGA-----GAGGTRNISGTNHYHVLLEAELADLHGKE-----------------------AALLFTS 113 (406)
T ss_pred HHHHHHHHHHHHHcCC-----CCcccccccCChHHHHHHHHHHHHHhCCC-----------------------cEEEeCC
Confidence 4455555555544321 11224444455556688899999999865 2577778
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596 208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE 287 (375)
Q Consensus 208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~ 287 (375)
|++||..++.+.... .++.+|+++...|.|+..++++.+.+++.++. .|+++|++.++
T Consensus 114 G~~An~~ai~~l~~~-----------------~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~ 171 (406)
T PRK13393 114 GYVSNWAALSTLGSR-----------------LPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLS 171 (406)
T ss_pred cHHHHHHHHHHhhcC-----------------CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHH
Confidence 889999988743211 02347888889999999998887777777775 37888998886
Q ss_pred HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcCccc
Q psy1596 288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNPSKW 364 (375)
Q Consensus 288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~HK~ 364 (375)
.... ..+.+|+....++++|.+.|+++|.++|+++|+++++|+||+.+.+ .+.-.. ...++ +..|.+.-++-|.
T Consensus 172 ~~~~--~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~~G~g~~~~~~~~~~~~i~~~tlsKa 248 (406)
T PRK13393 172 DLDP--HRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLY-GPRGGGIAEREGLADRLTIIEGTLAKA 248 (406)
T ss_pred hccC--CCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCchhhhcCCCCCCeEEEEeCchh
Confidence 4321 1245777778889999999999999999999999999999985432 111110 01122 3357776788998
Q ss_pred CCCC
Q psy1596 365 LMVH 368 (375)
Q Consensus 365 l~~P 368 (375)
++.+
T Consensus 249 ~g~~ 252 (406)
T PRK13393 249 FGVM 252 (406)
T ss_pred hccc
Confidence 7754
No 185
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.23 E-value=7.1e-11 Score=119.68 Aligned_cols=185 Identities=15% Similarity=0.116 Sum_probs=119.4
Q ss_pred cccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHH
Q psy1596 145 VTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAI 224 (375)
Q Consensus 145 ~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~ 224 (375)
..+.|.+|+.+ .++.+.++++||++ ..++|..|+.++.++..+......
T Consensus 66 GDD~Y~gdpSv--------~~Lee~vael~G~E-----------------------~alpthqGRgaE~Il~~~~~~~~g 114 (467)
T TIGR02617 66 GDEAYSGSRSY--------YALAESVKNIFGYQ-----------------------YTIPTHQGRGAEQIYIPVLIKKRE 114 (467)
T ss_pred CCcccccCchH--------HHHHHHHHHHhCCc-----------------------eEEECCCCchHHHHHHHhhccccc
Confidence 44667777777 78899999999998 268899999999888766543100
Q ss_pred HHhhccCCcchhhhhcCceEEEecCCCchHHHHH-HHHcCCeEEEEec----------CCCCCcCHHHHHHHHHHhhhcC
Q psy1596 225 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKA-GLIGLVKMRYIES----------DDKLSLRGDKLIEAIERDKKKH 293 (375)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~----------d~~g~md~e~Le~aI~~~~~~g 293 (375)
.+.. + .....+++...|+---++ +.++|..++.+++ ..+|.||+++|+++|++.-. .
T Consensus 115 ~e~g-----~------~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~ 182 (467)
T TIGR02617 115 QEKG-----L------DRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-N 182 (467)
T ss_pred cccc-----c------cccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-C
Confidence 0000 0 000013344445444344 4688888777643 23689999999999986422 1
Q ss_pred CccEEEEEEcCCCC-ccc---cccHHHHHHHHHhcCCEEEEecccccC-cccch---------hhhhhhc-CCCcccEEE
Q psy1596 294 LIPFFVCGTLGTTG-ACA---FDNLEELGPICEKEGLWLHVDAAYAGS-SFICP---------EFRKWLA-GVEYANSIA 358 (375)
Q Consensus 294 ~~p~~Vv~t~GtT~-tGa---vDpl~eI~~ia~~~~iwlHVDaA~gg~-~~~~~---------~~~~~~~-gie~aDSi~ 358 (375)
.++ ++..+..+|. -|. .++|.++.++|++||+.+|+|||.-+. +.+.. ..+...+ -...+|+++
T Consensus 183 ~i~-~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt 261 (467)
T TIGR02617 183 NVP-YIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLA 261 (467)
T ss_pred Cce-eeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEE
Confidence 233 3334433333 343 488999999999999999999998663 43211 1111111 125689999
Q ss_pred EcCcccCCCCCccee
Q psy1596 359 FNPSKWLMVHFDCTA 373 (375)
Q Consensus 359 ~d~HK~l~~P~~~g~ 373 (375)
+|+-|.+++|.|+-+
T Consensus 262 ~slsKglgApvGg~L 276 (467)
T TIGR02617 262 MSAKKDAMVPMGGLL 276 (467)
T ss_pred EEcCCCCCCcccceE
Confidence 999999999998644
No 186
>KOG0257|consensus
Probab=99.23 E-value=2e-10 Score=114.18 Aligned_cols=167 Identities=13% Similarity=0.099 Sum_probs=127.6
Q ss_pred CCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc
Q psy1596 122 KPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF 201 (375)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~ 201 (375)
-++.+.|++.-+....+...- ...+-++ .-|+.++.+.+.+.+++++|.... ....
T Consensus 40 fp~~~~P~fv~ea~~~~~~~~-~~~qYt~-----~~G~p~L~~aL~k~~se~~~~~~~------------------~~~e 95 (420)
T KOG0257|consen 40 FPDFPPPKFVTEAAKNAAKEP-STNQYTR-----GYGLPQLRKALAKAYSEFYGGLLD------------------PDDE 95 (420)
T ss_pred CCCCCCcHHHHHHHHHHhccc-hhccccc-----cCCchHHHHHHHHHHHHHhccccC------------------Cccc
Confidence 456677776665554433321 1111111 135666678888888887776521 3346
Q ss_pred EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--------C
Q psy1596 202 ITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--------D 273 (375)
Q Consensus 202 GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--------~ 273 (375)
.++|.|+.++.+.++++..+ +++.|++-+....+.....++.|...+.||.. +
T Consensus 96 VlVT~GA~~ai~~~~~~l~~-------------------~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~ 156 (420)
T KOG0257|consen 96 VLVTAGANEAISSALLGLLN-------------------PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSS 156 (420)
T ss_pred EEEecCchHHHHHHHHHHcC-------------------CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCc
Confidence 89999999999998887654 45688899999999999999988887877764 6
Q ss_pred CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596 274 KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 274 ~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
++.+|.+.||.+|.+.++ +|+.+.++|++|.+ ..|++|++||++||+|++.|.+|...
T Consensus 157 ~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~ 217 (420)
T KOG0257|consen 157 DWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWL 217 (420)
T ss_pred cccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHH
Confidence 789999999999988654 89999999999998 56899999999999999999999774
No 187
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.22 E-value=2.4e-10 Score=117.45 Aligned_cols=146 Identities=14% Similarity=0.106 Sum_probs=115.0
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++++.+++.+.+|... .+ ++...++|+|+|+++.+.+.+..+
T Consensus 95 ~G~~~LR~aiA~~l~~~~~~~~---------~v--------~p~~Ivit~G~t~al~~l~~~l~~--------------- 142 (447)
T PLN02607 95 HGLKSFRQAMASFMEQIRGGKA---------RF--------DPDRIVLTAGATAANELLTFILAD--------------- 142 (447)
T ss_pred cchHHHHHHHHHHHHHhcCCCC---------Cc--------CHHHeEEcCChHHHHHHHHHHhCC---------------
Confidence 5777788888999988877421 00 334688999999997766554322
Q ss_pred hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
++..|+++...+..+...+. ..+.+++.|+.+ +++.+|+++|++++++..+.|..+.+|+.+.++|++|.+
T Consensus 143 ----pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s 218 (447)
T PLN02607 143 ----PGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQ 218 (447)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccC
Confidence 34578899999988888775 467888999886 346799999999998876667667778889999999987
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+.+++|.++|+++++++++|.+|+...
T Consensus 219 ~e~l~~l~~~~~~~~i~lI~DEiYa~~~ 246 (447)
T PLN02607 219 RSVLEDILDFVVRKNIHLVSDEIYSGSV 246 (447)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 458899999999999999999998754
No 188
>PRK09265 aminotransferase AlaT; Validated
Probab=99.22 E-value=2.2e-10 Score=115.52 Aligned_cols=114 Identities=15% Similarity=-0.007 Sum_probs=91.5
Q ss_pred CCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCC
Q psy1596 199 PNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLS 276 (375)
Q Consensus 199 ~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~ 276 (375)
+...++|+|+++++..++.+... ++..|++++.+|..+..++...+.+++.++++. ++.
T Consensus 95 ~~~i~~t~G~~~~l~~~~~~~~~-------------------~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~ 155 (404)
T PRK09265 95 VDDIYIGNGVSELIVMAMQALLN-------------------NGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWF 155 (404)
T ss_pred cccEEEeCChHHHHHHHHHHhCC-------------------CCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCC
Confidence 34688999999988777654321 345788999999998888877777888888753 577
Q ss_pred cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccC
Q psy1596 277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
+|+++|++++.+. +.+|+.+.++++||.+-+ +++|+++|+++|+++++|.+|+..
T Consensus 156 ~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 213 (404)
T PRK09265 156 PDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKI 213 (404)
T ss_pred CCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhc
Confidence 9999999988543 346777889999999866 999999999999999999999864
No 189
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.22 E-value=2.7e-10 Score=115.37 Aligned_cols=138 Identities=9% Similarity=0.070 Sum_probs=109.2
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++++.+|+.+..|++. ++...++|+|+++++..++.+..+
T Consensus 74 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~I~it~G~~~al~~~~~~l~~--------------- 119 (409)
T PLN00143 74 GGILPARRAIADYLSNDLPYQL-------------------SPDDVYLTLGCKHAAEIIIKVLAR--------------- 119 (409)
T ss_pred CCCHHHHHHHHHHHHhhcCCCC-------------------CHhhEEEecChHHHHHHHHHHHcC---------------
Confidence 3566677888888888777763 345688999999998887765432
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-- 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-- 312 (375)
++..|+++..++..+...+...+.+++.++.+ +++.+|+++|++++++. +..++.+.++|+||.+-
T Consensus 120 ----~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~NPTG~~~s~ 189 (409)
T PLN00143 120 ----PEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADEN------TIAMVIINPGNPCGSVYSY 189 (409)
T ss_pred ----CCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccC------CEEEEEECCCCCCCCccCH
Confidence 34578899999988888888888899999874 45689999999887543 33667777999999984
Q ss_pred -cHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 313 -NLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 313 -pl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
.+++|+++|+++++++++|.+|....
T Consensus 190 ~~~~~l~~~a~~~~~~ii~De~Y~~l~ 216 (409)
T PLN00143 190 EHLNKIAETARKLGILVIADEVYGHIV 216 (409)
T ss_pred HHHHHHHHHHHHcCCeEEEEccccccc
Confidence 58888899999999999999998753
No 190
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.22 E-value=3.3e-10 Score=113.74 Aligned_cols=173 Identities=15% Similarity=0.061 Sum_probs=117.9
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
....+.++.+.|++++|.+. ...+|++|||+||..++.++|...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~---------------------~~v~~~~sgsea~~~al~~~~~~~--------------- 120 (413)
T cd00610 77 YNEPAVELAELLLALTPEGL---------------------DKVFFVNSGTEAVEAALKLARAYT--------------- 120 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCC---------------------CEEEEcCcHHHHHHHHHHHHHHHc---------------
Confidence 45566899999999988531 257999999999999999987531
Q ss_pred hcCceEEEecCCCchHHHHHHHHcCC------------eEEEEecCC------CCCcCHHHHHHHHHHhhhcCCccEEEE
Q psy1596 239 INSRLVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDD------KLSLRGDKLIEAIERDKKKHLIPFFVC 300 (375)
Q Consensus 239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~------~g~md~e~Le~aI~~~~~~g~~p~~Vv 300 (375)
.++.+++.+..-|.+...++.+.+. +++.+|.++ +...|+++|++++++. +..+.+|+
T Consensus 121 -~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi 196 (413)
T cd00610 121 -GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVI 196 (413)
T ss_pred -CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEE
Confidence 0123555666677777666554322 356777653 3445899999998753 12345666
Q ss_pred EEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 301 GTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 301 ~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
++-..+.+|.+-+ +++|.++|++||+++++|++|++.......+.....++ ..|.++++ |+++..+.+|.+
T Consensus 197 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~ 271 (413)
T cd00610 197 VEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAV 271 (413)
T ss_pred EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEE
Confidence 6666667788766 99999999999999999999986422111111111233 35766665 999877777765
No 191
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.21 E-value=3.1e-10 Score=114.32 Aligned_cols=147 Identities=11% Similarity=0.093 Sum_probs=111.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++.|-+ .+++|+||++|+..++.+... ++.
T Consensus 54 ~~le~~lA~l~g~~-----------------------~v~~~~gg~~Ai~~~l~all~-------------------~GD 91 (382)
T TIGR02080 54 DLLQQALAELEGGA-----------------------GAVVTNTGMSAIHLVTTALLG-------------------PDD 91 (382)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHHHHHcC-------------------CCC
Confidence 77888999988733 378999999998887765422 345
Q ss_pred EEEecCCCchHHHHHH-HH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG-LI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa-~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+....+ .+ ++.++..++. .|+++|+++|++. +.+|+.+.+++++|.+-|+++|++
T Consensus 92 ~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~-----~d~~~l~~ai~~~------tklV~l~~p~NPtG~~~dl~~I~~ 160 (382)
T TIGR02080 92 LLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ-----GDEQALRAALAQK------PKLVLIETPSNPLLRVVDIAKICH 160 (382)
T ss_pred EEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcC------ceEEEEECCCCCCCEecCHHHHHH
Confidence 7889999987665543 22 3445554432 3889999998653 447888899999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|+++.||.+|+.+....| +.. .+|.++.+++||+..+-+
T Consensus 161 la~~~g~~vvvD~a~~~~~~~~p----l~~---gaDivv~S~sK~l~G~~~ 204 (382)
T TIGR02080 161 LAKAVGAVVVVDNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSD 204 (382)
T ss_pred HHHHcCCEEEEECCCcccccCCc----hhh---CCCEEEeecceeccCCCC
Confidence 99999999999999986643222 111 369999999999987765
No 192
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.21 E-value=2.3e-10 Score=115.02 Aligned_cols=141 Identities=11% Similarity=0.123 Sum_probs=108.5
Q ss_pred cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596 157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL 234 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~ 234 (375)
.|..++++.+.+|+.+..|++ . ++ ...++|+|+++++..++.+..+. +
T Consensus 65 ~G~~~lr~~ia~~~~~~~g~~~~-------------------~~~~~i~it~G~~~al~~~~~~l~~~-----~------ 114 (396)
T PRK09147 65 AGLPALREAIAAWLERRYGLPAL-------------------DPATQVLPVNGSREALFAFAQTVIDR-----D------ 114 (396)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcC-------------------CccceEEECCChHHHHHHHHHHHcCC-----C------
Confidence 355667788889998888875 3 23 25778899999887766654320 0
Q ss_pred hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596 235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF- 311 (375)
Q Consensus 235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav- 311 (375)
..+..|+++..++..+..++...|.+++.||+++ ++.+|+++|++.+.+. +.+++.+.++++||.+
T Consensus 115 -----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~~~ 183 (396)
T PRK09147 115 -----GPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGNPTGAVL 183 (396)
T ss_pred -----CCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCCCcCccC
Confidence 0145788999998888888888888999999863 3689999999887542 3466677899999988
Q ss_pred --ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 --DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+.+++|+++|++|++||++|.+|+-..
T Consensus 184 s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 212 (396)
T PRK09147 184 PLDDWKKLFALSDRYGFVIASDECYSEIY 212 (396)
T ss_pred CHHHHHHHHHHHHHcCeEEEeeccccccc
Confidence 578899999999999999999998753
No 193
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.21 E-value=3.7e-10 Score=114.64 Aligned_cols=167 Identities=11% Similarity=0.020 Sum_probs=121.9
Q ss_pred cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596 157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPEL 234 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~ 234 (375)
.|...+++.+.+|+.+..|++ . ++. ..++|+|+++++..++.+..+
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~-------------------~~~~~I~it~Gs~~al~~~~~~~~~------------- 128 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDI-------------------DPVTEVIHSIGSKPALAMLPSCFIN------------- 128 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcC-------------------CCcceEEEccCHHHHHHHHHHHhCC-------------
Confidence 467788889999998888875 3 233 588999999987666654322
Q ss_pred hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
++..|++...++..+...++..|.+++.||.++ ++.+|+++|++++.+. +.+|+.+.++++||.+-
T Consensus 129 ------~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~ 196 (410)
T PRK06290 129 ------PGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVA 196 (410)
T ss_pred ------CCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCC
Confidence 345788899998888888888888999999874 4678999999888542 34777778999999984
Q ss_pred c---HHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 313 N---LEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 313 p---l~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+ +++|+++|++|++||++|.+|+....-. +.+.. +.+....+-+.-++.|.++.|
T Consensus 197 s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~-~~~~~~~~I~i~SfSK~~g~~ 256 (410)
T PRK06290 197 TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLS-VPGAKEVGVEIHSLSKAYNMT 256 (410)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhc-CCCccccEEEEeechhhcCCc
Confidence 4 7888889999999999999998653211 01111 111123457778889987543
No 194
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.21 E-value=3.5e-10 Score=113.90 Aligned_cols=146 Identities=12% Similarity=0.038 Sum_probs=108.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.++++.|.+ ..+++++|+.|+..++ .+.. ++.
T Consensus 53 ~~Le~~la~l~g~~-----------------------~al~~~SG~~Al~~~l-~~l~-------------------pGd 89 (380)
T PRK06176 53 FALEELIADLEGGV-----------------------KGFAFASGLAGIHAVF-SLFQ-------------------SGD 89 (380)
T ss_pred HHHHHHHHHHhCCC-----------------------CEEEECCHHHHHHHHH-HHcC-------------------CCC
Confidence 67888899998865 2588888988775433 2211 345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..|.+....+ ...+.+++.++. .|+++|+++++++ +.+|++..+++++|.+-|+++|++
T Consensus 90 ~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~-----~d~e~l~~ai~~~------t~lV~lesP~Nptg~~~di~~I~~ 158 (380)
T PRK06176 90 HVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT-----SDLSQIKKAIKPN------TKALYLETPSNPLLKITDLAQCAS 158 (380)
T ss_pred EEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC-----CCHHHHHHhcCcC------ceEEEEECCCCCCceecCHHHHHH
Confidence 7888888876655443 234667776664 3899999988653 447888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|++++||++|+......| . + -.+|.+++++||++..|-+
T Consensus 159 la~~~gi~vivD~t~a~~~~~~p----~--~-~gaDivv~S~tK~l~g~~d 202 (380)
T PRK06176 159 VAKDHGLLTIVDNTFATPYYQNP----L--L-LGADIVVHSGTKYLGGHSD 202 (380)
T ss_pred HHHHcCCEEEEECCccccccCCc----c--c-cCCCEEEecCceeccCCcc
Confidence 99999999999999987533222 1 1 1479999999999988764
No 195
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.21 E-value=3.9e-10 Score=112.16 Aligned_cols=166 Identities=15% Similarity=0.016 Sum_probs=121.7
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
|...+++.+.+|+.+..|.+. ++...++|+|+++++..++.+..+
T Consensus 66 g~~~lr~aia~~~~~~~~~~~-------------------~~~~I~it~G~~~~l~~~~~~~~~---------------- 110 (368)
T PRK03317 66 DAVALRADLAAYLTAQTGVGL-------------------TVENVWAANGSNEILQQLLQAFGG---------------- 110 (368)
T ss_pred chHHHHHHHHHHhhhhccCCC-------------------ChhhEEECCCHHHHHHHHHHHhcC----------------
Confidence 456677888889888888763 334688899999988777765432
Q ss_pred hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
++..|++...++..+..++...+.+++.++.++++.+|+++|++++++.. +.+|+.+.++++||.+-+.+++
T Consensus 111 ---~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l 182 (368)
T PRK03317 111 ---PGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDV 182 (368)
T ss_pred ---CCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHH
Confidence 34568889999988888888778888888877778899999999987431 2356677899999999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccc-hhhhhhhcCCCcccEEE-EcCcccCCCC
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGVEYANSIA-FNPSKWLMVH 368 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gie~aDSi~-~d~HK~l~~P 368 (375)
.++++..+++|++|.+|+....-. +........ .-+.+. -++.|.++.|
T Consensus 183 ~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~ 233 (368)
T PRK03317 183 EAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFA 233 (368)
T ss_pred HHHHHHCCceEEEeCCchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccc
Confidence 999999999999999998753110 111111111 114443 4999987644
No 196
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.21 E-value=4.2e-10 Score=113.15 Aligned_cols=146 Identities=12% Similarity=0.078 Sum_probs=108.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.++++.|.+ ..+++++|+.++..++ ... .++.
T Consensus 53 ~~Le~~lA~l~g~~-----------------------~~~~~~sG~aai~~~~-~~l-------------------~~Gd 89 (377)
T PRK07671 53 AALEELIAVLEGGH-----------------------AGFAFGSGMAAITAVM-MLF-------------------SSGD 89 (377)
T ss_pred HHHHHHHHHHhCCC-----------------------ceEEeCCHHHHHHHHH-HHh-------------------CCCC
Confidence 77888899998876 2478888887654433 211 1345
Q ss_pred EEEecCCCchHHHHHH-H---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG-L---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa-~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...|.+..+.+ . ..|.+++.++. .|+++|+++|++. +.+|++..+++++|.+.|+++|++
T Consensus 90 ~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~-----~d~~~l~~ai~~~------tklV~le~P~NPtg~~~dl~~I~~ 158 (377)
T PRK07671 90 HVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT-----SNLEEVEEAIRPN------TKAIYVETPTNPLLKITDIKKIST 158 (377)
T ss_pred EEEECCCccchHHHHHHHHHhcCCeEEEEECC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHH
Confidence 7888888887554432 2 24667777764 3899999998654 347888899999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|++++||++|+......| .-. .+|.++.+++||++.|-+
T Consensus 159 la~~~g~~lvvD~a~~~~~~~~p----~~~---g~Divv~S~sK~l~G~~~ 202 (377)
T PRK07671 159 IAKEKGLLTIVDNTFMTPYWQSP----ISL---GADIVLHSATKYLGGHSD 202 (377)
T ss_pred HHHHcCCEEEEECCCCccccCCh----hhh---CCeEEEecCcccccCCcc
Confidence 99999999999999986533222 111 469999999999988754
No 197
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.20 E-value=5.6e-10 Score=114.02 Aligned_cols=146 Identities=11% Similarity=-0.031 Sum_probs=108.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|+++.|.+ ..+++++|++|+..++.+... ++.
T Consensus 61 ~~Le~~lA~l~g~~-----------------------~~l~~ssG~~Ai~~al~al~~-------------------~Gd 98 (425)
T PRK06084 61 DVLEQRVAALEGGV-----------------------GALAVASGMAAITYAIQTIAE-------------------AGD 98 (425)
T ss_pred HHHHHHHHHHhCCC-----------------------ceeEehhHHHHHHHHHHHHhC-------------------CCC
Confidence 67788889888754 358999999998888876532 234
Q ss_pred EEEecCCCchHHHHHHH-H---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL-I---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~-l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...+......+. . .+.++..++. .|+++|+++|+++ +.+|++..+++++|.+-|+++|++
T Consensus 99 ~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-----~d~e~le~ai~~~------tklV~lesp~NPtG~v~dl~~I~~ 167 (425)
T PRK06084 99 NIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH-----DDIAALEALIDER------TKAVFCESIGNPAGNIIDIQALAD 167 (425)
T ss_pred EEEEeCCCcchHHHHHHHhcccceeEEEEECC-----CCHHHHHHHhccC------CcEEEEeCCCCCCCeecCHHHHHH
Confidence 67777777665554432 2 2445555543 4899999999764 337777889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
+|+++|++++||++|+.+....| .-. .+|.++.++|||++.+-
T Consensus 168 la~~~~i~vVvD~a~a~~~~~~p----~~~---gaDivv~S~tK~l~G~g 210 (425)
T PRK06084 168 AAHRHGVPLIVDNTVATPVLCRP----FEH---GADIVVHSLTKYIGGHG 210 (425)
T ss_pred HHHHcCCEEEEECCCcccccCCh----hhc---CCCEEEECchhcccccc
Confidence 99999999999999997654322 111 37999999999998664
No 198
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.19 E-value=3.4e-10 Score=113.41 Aligned_cols=168 Identities=11% Similarity=-0.010 Sum_probs=118.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++++.+|+.+..|++. ++. ..++|+|+++++..++.+...
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~I~it~Gs~~al~~~~~~l~~-------------- 114 (388)
T PRK07366 68 HGTLDFREAAAQWYEQRFGLAV-------------------DPETEVLPLIGSQEGTAHLPLAVLN-------------- 114 (388)
T ss_pred CCCHHHHHHHHHHHHHhhCCcC-------------------CCcCeEEECCCcHHHHHHHHHHhCC--------------
Confidence 4566777888899988888763 333 477788999988776654322
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
++..|++.+.++..+...++..|.+++.||.++ .+.+|.+++++.+... +.+|+.+.++++||.+
T Consensus 115 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~~~s 183 (388)
T PRK07366 115 -----PGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTAIAP 183 (388)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCccCC
Confidence 345788999999999888888889999999864 3568888888776432 3466777799999998
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCc-cc--EEEEcCcccCCCC
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEY-AN--SIAFNPSKWLMVH 368 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~-aD--Si~~d~HK~l~~P 368 (375)
+.+++|+++|+++++||++|.+|+-...-.......+..+.. -+ .+.-++.|.++.|
T Consensus 184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~ 244 (388)
T PRK07366 184 LSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMG 244 (388)
T ss_pred HHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 567788889999999999999998653211000001111211 12 2456899988644
No 199
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.19 E-value=1.2e-09 Score=108.21 Aligned_cols=157 Identities=15% Similarity=0.035 Sum_probs=113.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+++.+++.++.+ +...++|+|+++++..++.+... ++.
T Consensus 62 ~~lr~~ia~~~~~~---------------------~~~i~it~G~~~~l~~~~~~l~~-------------------~gd 101 (351)
T PRK14807 62 EKLREELARYCSVV---------------------PTNIFVGNGSDEIIHLIMLAFIN-------------------KGD 101 (351)
T ss_pred HHHHHHHHHHhCCC---------------------cccEEEecCHHHHHHHHHHHhcC-------------------CCC
Confidence 45566666667765 23578999999987766654321 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++++.++..+...++..|.+++.|+.++++.+|+++|++++++. .+.+|+.+.++++||.+-+.++|.++|++
T Consensus 102 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~ 176 (351)
T PRK14807 102 VVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEK 176 (351)
T ss_pred EEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 6888888888777777888889999999888899999999998642 13467777899999999999999999999
Q ss_pred cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
++.++++|++|+... .......+...+ --.+.-++.|.++.|
T Consensus 177 ~~~~~ivDe~y~~~~--~~~~~~~~~~~~-~vi~~~S~SK~~~~~ 218 (351)
T PRK14807 177 SRGIVVVDEAYFEFY--GNTIVDVINEFE-NLIVLRTLSKAFGLA 218 (351)
T ss_pred CCCEEEEeCcchhhc--ccchHHHhhhCC-CEEEEecchHhcccc
Confidence 899999999997532 111111111111 124567888988644
No 200
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.19 E-value=5.4e-10 Score=112.00 Aligned_cols=172 Identities=15% Similarity=0.073 Sum_probs=112.0
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++++.+++.+ .|.+. ++...++|+|||+++..++.+...
T Consensus 66 ~g~~~lr~~ia~~~~~-~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~--------------- 110 (397)
T PRK07568 66 QGIPELREAFAKYYKK-WGIDV-------------------EPDEILITNGGSEAILFAMMAICD--------------- 110 (397)
T ss_pred CCCHHHHHHHHHHHHH-hCCCC-------------------CcceEEEcCChHHHHHHHHHHhcC---------------
Confidence 3455555666666653 35442 334688999999998877654321
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCC-C-cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc-
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKL-S-LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD- 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g-~-md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD- 312 (375)
++..|++++..+..+...++..|.+++.|+.+ +++ . .++++|++++++. +.+|+.+.++++||.+-
T Consensus 111 ----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~ 180 (397)
T PRK07568 111 ----PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPK------TKAILISNPGNPTGVVYT 180 (397)
T ss_pred ----CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCcc------ceEEEEECCCCCCCccCC
Confidence 23467788877776666667778899999985 333 3 3579999888543 33677788999999874
Q ss_pred --cHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcCCCcccEEEEcCcccCCC-CCccee
Q psy1596 313 --NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAGVEYANSIAFNPSKWLMV-HFDCTA 373 (375)
Q Consensus 313 --pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gie~aDSi~~d~HK~l~~-P~~~g~ 373 (375)
++++|+++|+++|+++++|.+|+....-.+..... +.+...--.+.-+++|.++. -.-+|.
T Consensus 181 ~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 246 (397)
T PRK07568 181 KEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGC 246 (397)
T ss_pred HHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEE
Confidence 68999999999999999999998753211111111 11111111345588998764 333443
No 201
>PRK09148 aminotransferase; Validated
Probab=99.18 E-value=6e-10 Score=112.66 Aligned_cols=169 Identities=11% Similarity=0.052 Sum_probs=118.2
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++.+.+|+.+.+|.+. .+. ..++|+|+++++..++.+...
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~I~it~G~~~al~~~~~~l~~-------------- 114 (405)
T PRK09148 68 KGIPGLRRAQAAYYARRFGVKL-------------------NPDTQVVATLGSKEGFANMAQAITA-------------- 114 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEcCChHHHHHHHHHHhcC--------------
Confidence 4666777888888888778763 233 589999999998777655432
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc--
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-- 313 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-- 313 (375)
++..|++++.++..+...+...|.+++.||+++++. +++.++++++.... .+.+|+.+.++++||.+-+
T Consensus 115 -----~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~~~---~~~~v~l~~P~NPtG~~~s~~ 185 (405)
T PRK09148 115 -----PGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE-FFPALERAVRHSIP---KPIALIVNYPSNPTAYVADLD 185 (405)
T ss_pred -----CCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC-CccCHHHHHhhccc---cceEEEEeCCCCCCCcCCCHH
Confidence 345788999999888888877888999999865442 45667776654322 2568888889999999854
Q ss_pred -HHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 314 -LEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 314 -l~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++|+++|+++++++++|.+|+....-. +.... +.+......+.-++.|.++.|
T Consensus 186 ~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~-~~~~~~~~i~~~SfSK~~~~p 243 (405)
T PRK09148 186 FYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQ-VPGAKDVTVEFTSMSKTFSMA 243 (405)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhh-CCCccCcEEEEeccccccCCc
Confidence 5788999999999999999998643211 11111 111111123467899987644
No 202
>PRK06855 aminotransferase; Validated
Probab=99.18 E-value=1.1e-09 Score=111.83 Aligned_cols=167 Identities=12% Similarity=-0.036 Sum_probs=115.7
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++.+.+|+.+..|++. ++...++|+|+++++..++. ..+
T Consensus 73 ~G~~~LReaia~~~~~~~g~~~-------------------~~~~I~it~G~~~al~~~~~-l~~--------------- 117 (433)
T PRK06855 73 KGVLETREFLAELNNKRGGAQI-------------------TPDDIIFFNGLGDAIAKIYG-LLR--------------- 117 (433)
T ss_pred CCCHHHHHHHHHHHHhccCCCC-------------------CHhHEEEcCcHHHHHHHHHH-hcC---------------
Confidence 5667777889999988878763 33468899999999766652 211
Q ss_pred hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
++..|++.+.++.....+.. ..+.+++.||++ +++.+|+++|+++++... .+.+++.+.++|+||.+
T Consensus 118 ----~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NPTG~~~s 189 (433)
T PRK06855 118 ----REARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNPTGAVYP 189 (433)
T ss_pred ----CCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCCCCcCCC
Confidence 34578889999887654433 457788888886 346799999999986321 13356667799999998
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+.+++|+++|++||+||++|.+|+....-. +.+...... .+ -.+.-++.|.+.+|
T Consensus 190 ~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~-~~-~I~~~S~SK~~~~p 248 (433)
T PRK06855 190 KEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD-VP-GIALKGISKELPWP 248 (433)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCc-CC-eEEEecCccccCCC
Confidence 567888899999999999999998753211 111221111 01 14557889987544
No 203
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.17 E-value=1.2e-09 Score=110.04 Aligned_cols=137 Identities=10% Similarity=0.089 Sum_probs=102.8
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..++++++.+|+.+ .|.+. ++...++|+|+++++..++.+...
T Consensus 73 ~g~~~lr~aia~~~~~-~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~--------------- 117 (401)
T TIGR01264 73 VGALSAREAIASYYHN-PDGPI-------------------EADDVVLCSGCSHAIEMCIAALAN--------------- 117 (401)
T ss_pred CCCHHHHHHHHHHHhh-cCCCC-------------------CHHHEEECcChHHHHHHHHHHhCC---------------
Confidence 3455566666677665 23332 234578999999998877765432
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|++++.++..+...+...|.+++.++.+ +++.+|++.|++++++. +.+|+.+.++++||.+
T Consensus 118 ----~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~ 187 (401)
T TIGR01264 118 ----AGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEK------TAALIVNNPSNPCGSVFSR 187 (401)
T ss_pred ----CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccC------ceEEEEcCCCCCCCCCCCH
Confidence 23468888888888887788778888888875 35789999999988643 2366777899999988
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+++++|+++|+++|+++++|.+|....
T Consensus 188 ~~~~~l~~~a~~~~~~ii~De~y~~~~ 214 (401)
T TIGR01264 188 QHLEEILAVAERQCLPIIADEIYGDMV 214 (401)
T ss_pred HHHHHHHHHHHHCCCEEEEEhhhhhhc
Confidence 569999999999999999999998653
No 204
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.16 E-value=6.7e-10 Score=111.11 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=109.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++.|.+ ..++++||+.++..++ .... ++.
T Consensus 55 ~~le~~la~l~g~~-----------------------~~~~~~sG~~ai~~~~-~ll~-------------------~Gd 91 (366)
T PRK08247 55 GVLEQAIADLEGGD-----------------------QGFACSSGMAAIQLVM-SLFR-------------------SGD 91 (366)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHH-HHhC-------------------CCC
Confidence 77888999999886 1488999998876543 2211 234
Q ss_pred EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..+.+... .+...|.+++.++. .|+++|+++|++. +.+|+...+++++|.+.++++|++
T Consensus 92 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~-----~d~~~l~~~i~~~------tklv~le~P~NP~~~~~dl~~I~~ 160 (366)
T PRK08247 92 ELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT-----ASLKAIEQAITPN------TKAIFIETPTNPLMQETDIAAIAK 160 (366)
T ss_pred EEEEecCCcCcHHHHHHHHhhccCceEEEECC-----CCHHHHHHhcccC------ceEEEEECCCCCCCcHHHHHHHHH
Confidence 67788887765433 33345678887775 3899999998653 347888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|+++++|.+|+......|. - ..+|.++.+++|++..+-+
T Consensus 161 la~~~g~~lIvD~t~~~~~~~~p~----~---~g~di~i~S~sK~~~g~~d 204 (366)
T PRK08247 161 IAKKHGLLLIVDNTFYTPVLQRPL----E---EGADIVIHSATKYLGGHND 204 (366)
T ss_pred HHHHcCCEEEEECCCccccccCch----h---cCCcEEEeecceeccCCCc
Confidence 999999999999999765443221 1 2479999999999986543
No 205
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.16 E-value=7.7e-10 Score=110.06 Aligned_cols=153 Identities=14% Similarity=0.019 Sum_probs=107.0
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
|...+++++.+++++++|.+. ...++++||+++|..++.+..+
T Consensus 51 g~~~~~~~Le~~lA~~~g~~~---------------------e~ilv~~gg~~a~~~~~~al~~---------------- 93 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLGGPE---------------------EKILVFNRTSSAILATILALEP---------------- 93 (346)
T ss_pred CCHHHHHHHHHHHHHHcCCCc---------------------ceEEEECCHHHHHHHHHHHhCC----------------
Confidence 566888999999999999962 2479999999999988876532
Q ss_pred hhcCceEEEe---cCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 238 EINSRLVAYC---SDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 238 ~~~~~~vV~~---S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++..|++ +...|.|+..++++.+.+++.+ .|+++|+. . . .+.+|+.| |++++|.+
T Consensus 94 ---~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~-------~~l~~l~~----~-~---~~~lIiit-g~s~~G~v~~~ 154 (346)
T TIGR03576 94 ---PGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES-------DELSELKK----I-D---GTSLVVIT-GSTMDLKVVSE 154 (346)
T ss_pred ---CCCEEEECCCCCCCchhHHHHHHHcCCEEecc-------CCHHHHhh----C-c---CceEEEEE-CCCCCCcccCH
Confidence 2334553 3679999999998887765332 14444322 1 1 13355555 67889998
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCcccc-hhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
++|++|+++|+++|+|++||.||+.+.... ........ .+|.+..+++|++..+.
T Consensus 155 ~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~---~~divv~s~SKalaG~r 210 (346)
T TIGR03576 155 EDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDL---GADLVVTSTDKLMDGPR 210 (346)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHc---CCcEEEeccchhccccc
Confidence 899999999999999999999999764321 11000011 25889999999764443
No 206
>PRK08175 aminotransferase; Validated
Probab=99.16 E-value=1.3e-09 Score=109.62 Aligned_cols=169 Identities=12% Similarity=0.075 Sum_probs=118.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|..++++.+.+|+.+..|++. ++. ..++|+|++++....+.+...
T Consensus 67 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~i~~t~G~~~~l~~~~~~~~~-------------- 113 (395)
T PRK08175 67 RGIPRLRRAISRWYQDRYDVDI-------------------DPESEAIVTIGSKEGLAHLMLATLD-------------- 113 (395)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEccCcHHHHHHHHHHhCC--------------
Confidence 4677788889999998888763 233 578899998987665443221
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc--
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-- 313 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-- 313 (375)
++..|++++.++......+...|.+++.||.++++ .++++|+++++.... .+.+|+.+.++++||.+-+
T Consensus 114 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~l~~~l~~~~~---~~~~v~i~~p~NPtG~~~~~~ 184 (395)
T PRK08175 114 -----HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV-DFFNELERAIRESYP---KPKMMILGFPSNPTAQCVELE 184 (395)
T ss_pred -----CCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCC-CcHHHHHHHHhhccC---CceEEEEeCCCCCCCCCCCHH
Confidence 34578899999988888887778899999987543 468999998865211 2457777778999998744
Q ss_pred -HHHHHHHHHhcCCEEEEecccccCccc---chhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 314 -LEELGPICEKEGLWLHVDAAYAGSSFI---CPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 314 -l~eI~~ia~~~~iwlHVDaA~gg~~~~---~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++|+++|+++|+++++|.+|+....- .+.+.. +.+......++.++.|.++.|
T Consensus 185 ~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~p 242 (395)
T PRK08175 185 FFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQ-VPGAKDVAVEFFTLSKSYNMA 242 (395)
T ss_pred HHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhc-CCCcccCEEEEeeccccccCc
Confidence 589999999999999999999764321 111111 111111123568999998655
No 207
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.14 E-value=1.6e-09 Score=107.18 Aligned_cols=154 Identities=12% Similarity=0.062 Sum_probs=110.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++++++.+|.+ .....++|+|+++++..++.+..+ ++.
T Consensus 66 ~~lr~~ia~~~~~~--------------------~~~~I~~t~G~~~~i~~~~~~~~~-------------------~gd 106 (356)
T PRK04870 66 AALKAALRAAMGVP--------------------AGADVLLGNGSDELIQLLALACAK-------------------PGA 106 (356)
T ss_pred HHHHHHHHHHhCcC--------------------CCCcEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence 56677788888876 212467888888877665544321 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++++.++..+...+...|.+++.+|.++++.+|+++|++++.+.. +.+|+.+.++|+||.+-+.+++.++++.
T Consensus 107 ~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~ 181 (356)
T PRK04870 107 TVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTGNLFDDADVERIIEA 181 (356)
T ss_pred EEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHH
Confidence 78899999998888888889999999998888999999999986421 3367777899999999888888888777
Q ss_pred cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCccc
Q psy1596 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKW 364 (375)
Q Consensus 324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~ 364 (375)
.++++++|++|..... ..+...+...++ --+.-++.|+
T Consensus 182 ~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~~~S~SK~ 219 (356)
T PRK04870 182 APGLVVVDEAYQPFAG--DSWLPRLARFPN-LLVMRTVSKL 219 (356)
T ss_pred CCCEEEEECCchhhcC--cchHHHHhhCCC-EEEEecchhh
Confidence 6899999999975421 111111222222 2467788894
No 208
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.14 E-value=1.9e-09 Score=106.33 Aligned_cols=152 Identities=12% Similarity=-0.055 Sum_probs=111.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++.+++.++.+ +...++|+|+++++..++.+..+ ++.
T Consensus 63 ~~lr~aia~~~~~~---------------------~~~I~it~G~~~al~~~~~~l~~-------------------~gd 102 (353)
T PRK05387 63 DALRQAIAAYYGLD---------------------PEQVFVGNGSDEVLAHAFLAFFN-------------------HDR 102 (353)
T ss_pred HHHHHHHHHHhCCC---------------------HHHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence 46677777777765 23589999999998887765532 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++++.+|..+...+...|.+++.+|.++++.+|+++|++ . ..+|+.+.++|+||.+-+.+++.++++.
T Consensus 103 ~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~ 172 (353)
T PRK05387 103 PLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR----P------NGGIIFPNPNAPTGIALPLAEIERILAA 172 (353)
T ss_pred EEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh----c------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 78899998877776677778899999998889999999863 1 1257788899999999999999999987
Q ss_pred c-CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 324 E-GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 324 ~-~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+ ++++++|.+|+-..-. .........+ -..+..++.|.++.|
T Consensus 173 ~~~~~livDe~y~~~~~~--~~~~~~~~~~-~~i~~~S~SK~~~~~ 215 (353)
T PRK05387 173 NPDSVVVIDEAYVDFGGE--SAIPLIDRYP-NLLVVQTFSKSRSLA 215 (353)
T ss_pred CCCcEEEEeCcccccCCc--chHHHHhhCC-CEEEEEehhHhhcch
Confidence 6 9999999999643211 1111111111 246788999987644
No 209
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.14 E-value=1.3e-09 Score=111.56 Aligned_cols=148 Identities=13% Similarity=0.088 Sum_probs=113.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+++.+.++++.|-. ..+.+++|+.|+.+++.+... ++.
T Consensus 64 ~~lE~~la~leg~~-----------------------~av~~~SG~aAi~~al~all~-------------------~GD 101 (432)
T PRK06702 64 AAFEQKLAELEGGV-----------------------GAVATASGQAAIMLAVLNICS-------------------SGD 101 (432)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHhcC-------------------CCC
Confidence 67788888887765 368999999999999876521 345
Q ss_pred EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...+.+.... +...|.+++.+. ..+|+++|+++|++.+ .+|++..++++++.+-||++|++
T Consensus 102 ~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd----~~~d~~~l~~~I~~~T------k~I~~e~pgnP~~~v~Di~~I~~ 171 (432)
T PRK06702 102 HLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN----PNLTADEIVALANDKT------KLVYAESLGNPAMNVLNFKEFSD 171 (432)
T ss_pred EEEECCCchHHHHHHHHHHHHHCCCEEEEEC----CCCCHHHHHHhCCcCC------eEEEEEcCCCccccccCHHHHHH
Confidence 899999988766665 334567777774 3479999999997653 36777889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
+|+++|+++.+|.+|+...+.-| +-.| ||-+.-|..||+...-+
T Consensus 172 iA~~~gi~livD~T~~tP~~~~p----l~~G---ADIvv~S~TKy~~Ghsd 215 (432)
T PRK06702 172 AAKELEVPFIVDNTLATPYLCQA----FEHG---ANIIVHSTTKYIDGHAS 215 (432)
T ss_pred HHHHcCCEEEEECCCCchhhCCh----hhcC---CCEEEEccccccCCCcc
Confidence 99999999999999975433222 1223 79999999998776543
No 210
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.13 E-value=2e-09 Score=108.26 Aligned_cols=171 Identities=12% Similarity=0.022 Sum_probs=117.9
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc--EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF--ITFQTTASESTLICLLAGRTEAIRKYQQSHPEL 234 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~--GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~ 234 (375)
.|..++++++.+|+.+.-+... ++.. +++|+|+++|+..++.+....
T Consensus 69 ~G~~~lR~aia~~~~~~~~~~~-------------------~~~~i~v~iT~Ga~~al~~~~~~l~~~------------ 117 (396)
T PRK09257 69 EGLAAYRQAVQELLFGADSPAL-------------------AAGRVATVQTPGGTGALRVGADFLKRA------------ 117 (396)
T ss_pred CCCHHHHHHHHHHhcCCCCccc-------------------ccCeEEEEecCCccHHHHHHHHHHHHh------------
Confidence 5666677777888765432211 1223 489999999988876533210
Q ss_pred hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec-C-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596 235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES-D-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF- 311 (375)
Q Consensus 235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav- 311 (375)
.++..|++.+.++..+...+...|.+++.+|. + +++.+|+++|++++++... ...+++.+.++|+||.+
T Consensus 118 -----~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~---~~~~~i~~~p~NPTG~~~ 189 (396)
T PRK09257 118 -----FPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPA---GDVVLLHGCCHNPTGADL 189 (396)
T ss_pred -----CCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCC
Confidence 13468999999999999999988999999997 3 4578999999999874211 13466667789999987
Q ss_pred --ccHHHHHHHHHhcCCEEEEecccccCccc-chhhhhh--hcCC-CcccEEEEcCcccCCC
Q psy1596 312 --DNLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKW--LAGV-EYANSIAFNPSKWLMV 367 (375)
Q Consensus 312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~--~~gi-e~aDSi~~d~HK~l~~ 367 (375)
+.+++|+++|++|++|+++|.+|.....- .+..... +.+. +++ .+.-++.|.++.
T Consensus 190 s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~v-i~i~SfSK~~~~ 250 (396)
T PRK09257 190 TPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLEL-LVASSFSKNFGL 250 (396)
T ss_pred CHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcE-EEEEEcCCcCcc
Confidence 67888999999999999999999875421 0011110 1111 121 456789998765
No 211
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.13 E-value=2.1e-09 Score=106.63 Aligned_cols=155 Identities=13% Similarity=0.080 Sum_probs=104.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+++.+++.+|.+. ...++|+|+++++..++.+. . ++.
T Consensus 58 ~~lr~~ia~~~~~~~---------------------~~i~it~Ga~~~l~~~~~~l-~-------------------~g~ 96 (356)
T PRK08056 58 RHLHQALARHHQVPA---------------------SWILAGNGETESIFAVVSGL-K-------------------PRR 96 (356)
T ss_pred HHHHHHHHHHhCcCh---------------------hhEEECCCHHHHHHHHHHHh-C-------------------CCC
Confidence 567778888888762 35788999999877665532 1 122
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELG 318 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~ 318 (375)
++ +...++..+...++..|.+++.+|.++ ++.+| +++++.+.+ .+.+|+.+.++++||.+-+ +++|+
T Consensus 97 vi-v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~ 168 (356)
T PRK08056 97 AM-IVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIA 168 (356)
T ss_pred EE-EeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHH
Confidence 33 445666666677788888999999864 34455 344454432 1336777889999999866 88899
Q ss_pred HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
++|+++++|+++|++|.....-...+-..+... ....+..+++|+++.|
T Consensus 169 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~ 217 (356)
T PRK08056 169 ERCKSLNIALILDEAFIDFIPDETGFIPQLADN-PHLWVLRSLTKFYAIP 217 (356)
T ss_pred HHHHhcCCEEEEecchhccCCcchHHHHHhccC-CCEEEEEechhhccCc
Confidence 999999999999999976532111111112222 2356789999998844
No 212
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.13 E-value=8.9e-10 Score=110.66 Aligned_cols=142 Identities=13% Similarity=0.102 Sum_probs=107.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|..++++.+.+|+.+..|++.+ + ++ ...++|+|++++...++.+..+. +
T Consensus 64 ~G~~~lr~aia~~~~~~~~~~~~---------~--------~~~~~i~it~Ga~~al~~~~~~l~~~----------g-- 114 (393)
T TIGR03538 64 KGLPELRQAIARWLERRFDLPTG---------V--------DPERHVLPVNGTREALFAFAQAVINP----------G-- 114 (393)
T ss_pred CCCHHHHHHHHHHHHHhhCCccc---------C--------CCCceEEECCCcHHHHHHHHHHHcCC----------C--
Confidence 45667778888999888887610 0 22 24788999999987776654321 0
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
....|++++.++..+...++..|.+++.||+++ ++.+|+++|++++.+. +.+|+.+.++++||.+
T Consensus 115 -----d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPtG~~~s 183 (393)
T TIGR03538 115 -----QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRR------CQLLFVCSPGNPTGAVLS 183 (393)
T ss_pred -----CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhc------ceEEEEeCCCCCcCcccC
Confidence 112488888998888887888888999999853 3678999999988653 3366677899999988
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+.+++|+++|++|+++|++|.+|+-..
T Consensus 184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~ 211 (393)
T TIGR03538 184 LDTLKKLIELADQYGFIIASDECYSELY 211 (393)
T ss_pred HHHHHHHHHHHHHCCEEEEECcchhhcc
Confidence 458999999999999999999998643
No 213
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.12 E-value=2.9e-09 Score=107.01 Aligned_cols=160 Identities=14% Similarity=0.050 Sum_probs=107.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.++|++++|.+ .....+|++||++||..|+.+++... ++.
T Consensus 88 ~~la~~l~~~~~~~--------------------~~~~v~~~~sgsea~~~al~~~~~~g-----------------~~~ 130 (398)
T PRK03244 88 IALAERLVELLGAP--------------------EGGRVFFCNSGAEANEAAFKLARLTG-----------------RTK 130 (398)
T ss_pred HHHHHHHHHhCCCC--------------------CCCEEEEeCchHHHHHHHHHHHHHHC-----------------CCe
Confidence 67889999988754 22468999999999999999887620 123
Q ss_pred EEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
+|.....-|.+...+..+.+. ++..+|. .|+++|++++.+ .+.+|++.-..+++|.+
T Consensus 131 ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~------~~~aviiep~~~~~G~~ 199 (398)
T PRK03244 131 IVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDD------DTAAVFLEPIQGEAGVV 199 (398)
T ss_pred EEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcC------CeEEEEEecccCCCCCc
Confidence 455555556665555544332 2333332 378999988842 24466677677889998
Q ss_pred cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
-| +++|.++|++||+++++|++|++.......+.....++ ..|.+++ .|+++..+..|.+
T Consensus 200 ~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~ 263 (398)
T PRK03244 200 PPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGAC 263 (398)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEE
Confidence 66 99999999999999999999987432211111112344 4677766 5998865666654
No 214
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.12 E-value=2.2e-10 Score=114.06 Aligned_cols=158 Identities=11% Similarity=-0.077 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC-hHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT-ASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG-GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
++-+++++.++++||.+ .+...+||+| ||+++-.++...... .
T Consensus 44 ~~~~~~r~~l~~l~~~~--------------------~~~~vvf~~gs~T~a~~~~~~~l~~~----------------~ 87 (355)
T cd00611 44 AIVNEAESDLRELLNIP--------------------DNYKVLFLQGGATGQFAAVPLNLLGD----------------K 87 (355)
T ss_pred HHHHHHHHHHHHHhCCC--------------------CCceEEEEcCCchHHHHHHHHhcCCC----------------C
Confidence 33478899999999986 3456899988 999977666543110 0
Q ss_pred cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCc-C-HHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSL-R-GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~m-d-~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
.+.++|+.....|.+..-+ +-.+.+++.++.+++|.. + ++..+..+.++ +.+|+++..+|.+|.+ ++
T Consensus 88 ~~~~~i~~g~~~~~~~~~a-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~lV~~~h~~t~tG~~--~~-- 156 (355)
T cd00611 88 GTADYVVTGAWSAKAAKEA-KRYGGVVVIVAAKEEGKYTKIPDVETWDLAPD------AAYVHYCSNETIHGVE--FD-- 156 (355)
T ss_pred CeEEEEECCHHHHHHHHHH-HhcCCCcEEEecccccCCCCCCCHhhcCCCCC------CCEEEEeCCcccccEE--cc--
Confidence 1345677776666664333 333578888887655433 4 23232333322 4489999999999997 22
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++++.+|+.+.|||+++.+....+- + ..|.+..++||+++ |.|.|++|
T Consensus 157 -~i~~~~g~~~~VDa~qs~g~~~idv-~-------~~~~~~ss~~K~lG-P~G~g~l~ 204 (355)
T cd00611 157 -EVPDTGGVPLVADMSSNILSRPIDV-S-------KFGVIYAGAQKNLG-PAGVTVVI 204 (355)
T ss_pred -eecccCCCeEEEEccccccCCCCCH-H-------HhCEEEeecccccC-CCceEEEE
Confidence 4555699999999999999764321 1 12434455999765 99999985
No 215
>PRK03321 putative aminotransferase; Provisional
Probab=99.11 E-value=1.5e-09 Score=107.13 Aligned_cols=129 Identities=9% Similarity=0.004 Sum_probs=97.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++.+++++|.+ +...++|+|+++++..++.+.. .++.
T Consensus 60 ~~lr~~ia~~~~~~---------------------~~~I~~~~G~~~~l~~~~~~~~-------------------~~gd 99 (352)
T PRK03321 60 VELRAALAEHLGVP---------------------PEHVAVGCGSVALCQQLVQATA-------------------GPGD 99 (352)
T ss_pred HHHHHHHHHHhCcC---------------------HHHEEECCCHHHHHHHHHHHhc-------------------CCCC
Confidence 55667777777765 2357888888877665544321 1345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|+++..+.......++..|.+++.+|.++++.+|++++++++++. +.+|+.+.+++++|.+-+.++|.++|++
T Consensus 100 ~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~l~~l~~~ 173 (352)
T PRK03321 100 EVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDR------TRLIFVCNPNNPTGTVVTPAELARFLDA 173 (352)
T ss_pred EEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence 6778877766666666777889999999867889999999988642 3367777899999999999999999987
Q ss_pred --cCCEEEEecccccCc
Q psy1596 324 --EGLWLHVDAAYAGSS 338 (375)
Q Consensus 324 --~~iwlHVDaA~gg~~ 338 (375)
+++++++|++|+...
T Consensus 174 ~~~~~~ii~De~y~~~~ 190 (352)
T PRK03321 174 VPADVLVVLDEAYVEYV 190 (352)
T ss_pred CCCCeEEEEechHHHhc
Confidence 599999999998653
No 216
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.11 E-value=2.5e-09 Score=105.91 Aligned_cols=162 Identities=14% Similarity=0.041 Sum_probs=113.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++++++.+|.+. ...++|+|+++++..++.+..+ ++.
T Consensus 67 ~~lr~~ia~~~~~~~---------------------~~i~~t~G~~~~l~~~~~~~~~-------------------~gd 106 (359)
T PRK03158 67 PELRTKVAKHLGVDE---------------------EQLLFGAGLDEVIQMISRALLN-------------------PGT 106 (359)
T ss_pred HHHHHHHHHHhCCCH---------------------HHEEECCCHHHHHHHHHHHHhC-------------------CCC
Confidence 556777777777651 3578999999987655443321 245
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++++.++..+...+...|.+++.+|.+ ++.+|+++|++++++. +.+|+.+.++++||.+-+.++|.++++.
T Consensus 107 ~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~ 179 (359)
T PRK03158 107 NTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLES 179 (359)
T ss_pred EEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 78899999988888888888899999997 6789999999887542 3366778899999999999999988887
Q ss_pred --cCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596 324 --EGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA 373 (375)
Q Consensus 324 --~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~ 373 (375)
+|+++++|.+|+....-. +.....+... .-..+.-++.|.++.| .-+|.
T Consensus 180 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~ 233 (359)
T PRK03158 180 VPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGY 233 (359)
T ss_pred CCCCcEEEEECchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhheh
Confidence 599999999997654211 1110111111 1134556888987644 33343
No 217
>PRK09105 putative aminotransferase; Provisional
Probab=99.10 E-value=4.2e-09 Score=105.39 Aligned_cols=160 Identities=13% Similarity=0.038 Sum_probs=112.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++.+++.+|++. ...++|+|+++++..++.+..+ ++.
T Consensus 81 ~~Lr~aia~~~~v~~---------------------e~I~it~Gs~~ai~~~~~~l~~-------------------~gd 120 (370)
T PRK09105 81 DDLRTLFAAQEGLPA---------------------DHVMAYAGSSEPLNYAVLAFTS-------------------PTA 120 (370)
T ss_pred HHHHHHHHHHhCcCh---------------------hhEEEcCChHHHHHHHHHHHcC-------------------CCC
Confidence 456666777788762 3588999999998877765422 245
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++++.+|..+...++..|.+++.+|.++++.+|+++|++.. +. +.+|+.+.++++||.+-+.++|.++++.
T Consensus 121 ~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~ 193 (370)
T PRK09105 121 GLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLAN 193 (370)
T ss_pred EEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHh
Confidence 7888999999998888888899999999888899999998752 11 3367778899999999888888777654
Q ss_pred --cCCEEEEecccccCcccchhhhhhhcCCCcccEEEE-cCcccCCCC-Cccee
Q psy1596 324 --EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF-NPSKWLMVH-FDCTA 373 (375)
Q Consensus 324 --~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~-d~HK~l~~P-~~~g~ 373 (375)
+++|+++|.+|.-+.. .+....... ...+.+++ ++.|.++.| +-+|.
T Consensus 194 ~~~~~~lIvDEaY~~f~~-~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~ 244 (370)
T PRK09105 194 KPAGSVLLVDEAYIHFSD-APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGL 244 (370)
T ss_pred CCCCcEEEEECchHHhcc-CcchHHHHh--hCCCEEEEecccHhhcCCccceee
Confidence 4899999999954321 111111111 12355665 677876533 22444
No 218
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.09 E-value=2.1e-09 Score=106.68 Aligned_cols=162 Identities=11% Similarity=-0.036 Sum_probs=109.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.+++++|.+. ...++|+|+++++...+.+... ++.
T Consensus 70 ~~lr~~ia~~~~~~~---------------------~~i~~t~G~~~~l~~~~~~l~~-------------------~gd 109 (367)
T PRK02731 70 FELKAALAEKFGVDP---------------------ERIILGNGSDEILELLARAYLG-------------------PGD 109 (367)
T ss_pred HHHHHHHHHHhCcCH---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence 456677777777751 3468888888876554433211 234
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++++.+|..+...+...|.+++.+|. +++.+|+++|++++++. +.+|+.+.++++||.+-+.++|.++++.
T Consensus 110 ~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~ 182 (367)
T PRK02731 110 EVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAG 182 (367)
T ss_pred EEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHh
Confidence 7888888887777666777889999998 45779999999988632 4477778999999999999999999887
Q ss_pred c--CCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596 324 E--GLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM 374 (375)
Q Consensus 324 ~--~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l 374 (375)
. ++|+++|++|.....-. +.. ..+..-++ ..+..++.|.++.| +.+|.+
T Consensus 183 ~~~~~~li~De~y~~~~~~~~~~~~~-~~~~~~~~-~i~~~S~SK~~g~~G~RiG~l 237 (367)
T PRK02731 183 VPPDVLVVLDEAYAEYVRRKDYEDGL-ELVAKFPN-VVVTRTFSKAYGLAGLRVGYG 237 (367)
T ss_pred CCCCcEEEEECcHHHhccCcCcccHH-HHHhhcCC-EEEEeeehHhhcCcccceeee
Confidence 5 89999999997643211 111 11111111 23444778976533 455654
No 219
>PRK06460 hypothetical protein; Provisional
Probab=99.08 E-value=2.9e-09 Score=107.07 Aligned_cols=145 Identities=13% Similarity=0.002 Sum_probs=100.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++++|.+ ..+++++|++++..++.+... ++.
T Consensus 48 ~~L~~~lA~l~g~~-----------------------~~v~~~sG~~ai~~~l~al~~-------------------~Gd 85 (376)
T PRK06460 48 LELTKKIVELENAE-----------------------MGVAFSSGMGAISTTALALLK-------------------PGN 85 (376)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence 67788899998876 146678888887776654321 234
Q ss_pred EEEecCCCc----hHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAH----SSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH----~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...+ ..+.+.+...|.+++.++.++ .+.+++++++ .+.+|++..+++++|.+-|+++|++
T Consensus 86 ~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~-----~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~ 154 (376)
T PRK06460 86 SVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGS-----DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSK 154 (376)
T ss_pred EEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCC-----HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHH
Confidence 666765433 333445566677888887642 2334443322 2458888999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+|+++|++++||++|+.+.... .+.. .+|.++.++||+++.+
T Consensus 155 la~~~g~~vivDea~~~~~~~~----~l~~---~~divv~S~sK~l~G~ 196 (376)
T PRK06460 155 VCKENGSILIVDATFSTPINQK----PLEL---GADIVVHSASKFLAGH 196 (376)
T ss_pred HHHHcCCEEEEECCcCccccCC----hhhc---CCCEEEeecceeccCC
Confidence 9999999999999998653211 1111 3699999999998643
No 220
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.08 E-value=1.4e-09 Score=108.91 Aligned_cols=149 Identities=13% Similarity=0.073 Sum_probs=105.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++.|-+ .+++++||++|+..++. +.. ++.
T Consensus 57 ~~le~~lA~leg~~-----------------------~~v~~~sG~aAi~~~l~-~l~-------------------~GD 93 (364)
T PRK07269 57 AKLEETLAAIESAD-----------------------YALATSSGMSAIVLAFS-VFP-------------------VGS 93 (364)
T ss_pred HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHH-HhC-------------------CCC
Confidence 67778888887654 47999999999887773 211 234
Q ss_pred EEEecCCCchHHHHHHHH--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLI--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia 321 (375)
.|+++...+.....-... .... +.. .+.+|+++++++|++. +.+|++..+++++|.+-|+++|+++|
T Consensus 94 ~VI~~~~~yg~~~~~~~~~~~~~~---~~~--~~~~d~~~l~~~i~~~------TklV~lesP~NPtg~~~di~~I~~la 162 (364)
T PRK07269 94 KVVAVRDLYGGSFRWFNQQEKEGR---FHF--TYANTEEELIAAIEED------TDIVYIETPTNPLMVEFDIEKVAKLA 162 (364)
T ss_pred EEEEecCCcCchHHHHHHHHhcCc---EEE--EecCCHHHHHHhcCcC------ceEEEEECCCCCCCeeeCHHHHHHHH
Confidence 567776665433332211 1111 111 1236899999999754 34888999999999999999999999
Q ss_pred HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--cee
Q psy1596 322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTA 373 (375)
Q Consensus 322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~ 373 (375)
+++|++++||.+|+......| . + ..+|.++.|+||++..+-+ .|+
T Consensus 163 ~~~gi~vvvD~t~~~~~~~~p----l--~-~gaDivv~S~tK~l~g~~d~~gG~ 209 (364)
T PRK07269 163 HAKGAKVIVDNTFYSPIYQRP----I--E-LGADIVLHSATKYLSGHNDVLAGV 209 (364)
T ss_pred HHcCCEEEEECCCcccccCCc----h--h-hCCcEEEecCceeccCCCcccceE
Confidence 999999999999876543222 1 1 1479999999999987776 454
No 221
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.07 E-value=3.2e-09 Score=105.31 Aligned_cols=156 Identities=13% Similarity=0.044 Sum_probs=112.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC-c
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS-R 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~-~ 242 (375)
.++.+++++.+|++. ...++|+|+++++..++.+... + +
T Consensus 60 ~~l~~~~a~~~g~~~---------------------~~I~~~~Gs~e~i~~~~~~~~~-------------------~g~ 99 (351)
T PRK01688 60 KAVIENYAAYAGVKP---------------------EQVLVSRGADEGIELLIRAFCE-------------------PGK 99 (351)
T ss_pred HHHHHHHHHHhCCCH---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence 688899999999872 3578999999998777655322 2 2
Q ss_pred eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
..|++++.+|..+...++..|.+++.||.++++.+|+++|+++++ . +.+|+.+.++++||.+-+.++|.++++
T Consensus 100 ~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~-~------~~lv~l~nPnNPTG~~~~~~~l~~l~~ 172 (351)
T PRK01688 100 DAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNLD-G------VKVVYVCSPNNPTGNLINPQDLRTLLE 172 (351)
T ss_pred CEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhcc-C------CcEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 468889999999888888888999999998889999999998873 2 336777899999999987777666655
Q ss_pred hc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 323 KE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 323 ~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
.. +.++++|+||.-+... +.....+...+. =.+.-++.|+++.|
T Consensus 173 ~~~~~~~vivDEay~~f~~~-~s~~~~~~~~~n-~iv~rSfSK~~gla 218 (351)
T PRK01688 173 LTRGKAIVVADEAYIEFCPQ-ASLAGWLAEYPH-LVILRTLSKAFALA 218 (351)
T ss_pred hCCCCcEEEEECchhhcCCC-CChHHHHhhCCC-EEEEecchHhhcCH
Confidence 32 6899999999765311 111112211111 13567888977633
No 222
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.07 E-value=3.6e-09 Score=106.90 Aligned_cols=173 Identities=10% Similarity=0.010 Sum_probs=118.7
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEE--EeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFIT--FQTTASESTLICLLAGRTEAIRKYQQSHPEL 234 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gv--ftsGGT~Anl~AL~aar~~~~~~~~~~~~~~ 234 (375)
.|..++++++.+|+.+.-+.+. ++...+ .|.||++|...++.+.+.-.
T Consensus 72 ~G~~~lR~aia~~~~~~~~~~~-------------------~~~~v~~~~t~G~~~al~~~~~~l~~~~----------- 121 (404)
T PTZ00376 72 EGLQSFIEAAQKLLFGEASYAL-------------------AEKRIATVQALSGTGALRLGFEFLKRFL----------- 121 (404)
T ss_pred CCCHHHHHHHHHHhcCCCcccc-------------------ccCeEEEeeccCcchHHHHHHHHHHHhc-----------
Confidence 5666677777888755433221 222445 48899999877665443211
Q ss_pred hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596 235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF- 311 (375)
Q Consensus 235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav- 311 (375)
.++..|++.+.++..+...++..|.+++.||.. +++.+|++.+++++++... ...+++.+.++|+||.+
T Consensus 122 -----~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NPTG~~~ 193 (404)
T PTZ00376 122 -----PAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNPTGVDP 193 (404)
T ss_pred -----CCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCC
Confidence 135689999999999999999999999999983 4588999999999975321 13467778899999988
Q ss_pred --ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCC-Ccc-c-EEEEcCcccCCCC
Q psy1596 312 --DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGV-EYA-N-SIAFNPSKWLMVH 368 (375)
Q Consensus 312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gi-e~a-D-Si~~d~HK~l~~P 368 (375)
+.+++|+++|++|++|+++|.+|.....-.. .... ...+ +.. . .+.-++.|.+++|
T Consensus 194 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~~~ 256 (404)
T PTZ00376 194 TEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYA-IRLFAERGVEFLVAQSFSKNMGLY 256 (404)
T ss_pred CHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHH-HHHHHhcCCcEEEEEeCCCccccc
Confidence 6788889999999999999999986543110 1110 1111 111 2 4556889988754
No 223
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.06 E-value=3.7e-09 Score=105.45 Aligned_cols=157 Identities=13% Similarity=0.049 Sum_probs=109.6
Q ss_pred HHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceE
Q psy1596 165 KVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 244 (375)
Q Consensus 165 ~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~v 244 (375)
.+++++++.+|.+. ...++|+|+++++...+.+... ++..
T Consensus 75 ~lr~~ia~~~~~~~---------------------~~i~~t~G~~~~l~~~~~~~~~-------------------~gd~ 114 (371)
T PRK05166 75 ALREAIAARTGVPA---------------------DRIILGNGSEDLIAVICRAVLR-------------------PGDR 114 (371)
T ss_pred HHHHHHHHHhCcCH---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCCE
Confidence 56677788888762 3578999999987665544311 3457
Q ss_pred EEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh-
Q psy1596 245 AYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK- 323 (375)
Q Consensus 245 V~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~- 323 (375)
|++...++......++..|.+++.||.++++.+|+++|++++++. +.+|+.+.++++||.+-+.+++.++++.
T Consensus 115 vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~ 188 (371)
T PRK05166 115 VVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARA------PRMLMFSNPSNPVGSWLTADQLARVLDAT 188 (371)
T ss_pred EEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 888999998888888888889999999888899999999988653 2367778999999999877766666653
Q ss_pred -cCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 324 -EGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 324 -~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
.++++++|++|+-...-. +.....+.....--.+.-++.|.++.
T Consensus 189 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l 235 (371)
T PRK05166 189 PPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGL 235 (371)
T ss_pred CCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhc
Confidence 489999999998654100 11111111110011356688998763
No 224
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.05 E-value=2.5e-09 Score=108.81 Aligned_cols=138 Identities=14% Similarity=0.007 Sum_probs=102.0
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHH
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGD 280 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e 280 (375)
..++|+|+++++..++.+..+ ++..|++.+.++..+...+...|.+++.||++++| +|++
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~-------------------pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~ 202 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLL-------------------PGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPE 202 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCC-------------------CCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHH
Confidence 588999999998877765432 34578999999999999998888999999997765 9999
Q ss_pred HHHHHHHHhhhcCCccEEEEEE-cCCCCccccccH---HHHHHHHHhc-CCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGT-LGTTGACAFDNL---EELGPICEKE-GLWLHVDAAYAGSSFICPEFRKWLAGVEYAN 355 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t-~GtT~tGavDpl---~eI~~ia~~~-~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD 355 (375)
+|++++++. +.+++.+ .++++||.+-+. ++|.++|+++ ++||++|.+|+-... .+ +...+.....--
T Consensus 203 ~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~-~~-~~~~~~~~~~~v 274 (431)
T PRK15481 203 KLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSS-SP-YHSVIPQTTQRW 274 (431)
T ss_pred HHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhcc-CC-CCCCCcCCCCCE
Confidence 999998642 3355555 789999998665 5999999999 999999999986531 11 111111110112
Q ss_pred EEEEcCcccCC
Q psy1596 356 SIAFNPSKWLM 366 (375)
Q Consensus 356 Si~~d~HK~l~ 366 (375)
.+.-++.|.++
T Consensus 275 i~~~SfSK~~~ 285 (431)
T PRK15481 275 ALIRSVSKALG 285 (431)
T ss_pred EEEeeeccccC
Confidence 46678899887
No 225
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.05 E-value=4.2e-09 Score=105.44 Aligned_cols=144 Identities=15% Similarity=-0.008 Sum_probs=102.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++. . ...+++++|+.++..++.+... ++.
T Consensus 54 ~~Le~~lA~l~--~----------------------~~~v~~~sG~~Ai~~~l~all~-------------------~Gd 90 (366)
T PRK07582 54 RALEAALGELE--G----------------------AEALVFPSGMAAITAVLRALLR-------------------PGD 90 (366)
T ss_pred HHHHHHHHHHc--C----------------------CCEEEECCHHHHHHHHHHHhcC-------------------CCC
Confidence 66777788876 2 1368889999888776654311 345
Q ss_pred EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..|+.....+. ..|.+++.|+.++++. .+.+. +.+|+...+++++|.+.|+++|++
T Consensus 91 ~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~--------~~~~~------t~lV~le~p~NPtg~v~di~~I~~ 156 (366)
T PRK07582 91 TVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE--------AALAG------ADLVLAETPSNPGLDVCDLAALAA 156 (366)
T ss_pred EEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH--------HhccC------ceEEEEECCCCCCCCccCHHHHHH
Confidence 78888888877766542 2467888888754321 11111 336777889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC 371 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~ 371 (375)
+|+++|++++||++|+.+....| +. + .+|.++.++|||+..|-|+
T Consensus 157 ~a~~~g~~lvVD~t~~~~~~~~p-----~~-~-g~Divv~S~sK~l~G~~g~ 201 (366)
T PRK07582 157 AAHAAGALLVVDNTTATPLGQRP-----LE-L-GADLVVASDTKALTGHSDL 201 (366)
T ss_pred HHHHcCCEEEEECCCCCccccCc-----hh-c-CCcEEEecccccccCCCCe
Confidence 99999999999999964322222 11 1 3699999999999887763
No 226
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.04 E-value=5e-09 Score=102.99 Aligned_cols=153 Identities=12% Similarity=-0.011 Sum_probs=108.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++++++++|.+. ...++|+|+++++..+. .+.. ++
T Consensus 50 ~~lr~~la~~~~~~~---------------------~~i~~t~G~~~~i~~~~-~~l~-------------------~g- 87 (330)
T TIGR01140 50 DELRAAAAAYYGLPA---------------------ASVLPVNGAQEAIYLLP-RLLA-------------------PG- 87 (330)
T ss_pred HHHHHHHHHHhCCCh---------------------hhEEECCCHHHHHHHHH-HHhC-------------------CC-
Confidence 677888899888751 34678888888766532 2221 23
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~i 320 (375)
.|++.+.+|.++...+...|.+++.++ |++.|++++++ +.+|+.+.+++++|.+-+ +++|+++
T Consensus 88 ~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~~-------~~~v~i~~p~NPtG~~~~~~~~~~l~~~ 153 (330)
T TIGR01140 88 RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALEE-------LDVLVLCNPNNPTGRLIPPETLLALAAR 153 (330)
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhccc-------CCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 477778899998888887888888887 88999888732 226777889999999866 7778889
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM 374 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l 374 (375)
|+++|+++++|.+|+.... .+.+..... ...-+.+..+++|+++.| ..+|.+
T Consensus 154 a~~~~~~ii~De~y~~~~~-~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i 206 (330)
T TIGR01140 154 LRARGGWLVVDEAFIDFTP-DASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFV 206 (330)
T ss_pred hHhcCCEEEEECcccccCC-ccchhhHhc-cCCCEEEEEecchhhcCchhhhhhe
Confidence 9999999999999986642 111222111 112357788999998755 445554
No 227
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.03 E-value=4.7e-09 Score=116.35 Aligned_cols=157 Identities=11% Similarity=0.020 Sum_probs=109.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|+.+.-.+...++++|+|++. ....++.++|.+.-.++++.+...
T Consensus 117 QG~Leal~~~Qt~la~LtG~~~---------------------anaSl~d~aTAa~ea~~~a~~~~~------------- 162 (954)
T PRK05367 117 QGRLEALLNFQTMVADLTGLEI---------------------ANASLLDEATAAAEAMALAKRVSK------------- 162 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCCh---------------------hhccccccHHHHHHHHHHhhhhcc-------------
Confidence 5565555788899999999983 345788888877554433332210
Q ss_pred hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
.++..|++++..|.+....++ -.|.+++.+|.+++ ++ .+ ..+.++.+. .+.+|.+.
T Consensus 163 ---~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~--------~~------~~~~vlvq~-p~~~G~i~ 222 (954)
T PRK05367 163 ---SKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD--------HD------DVFGVLLQY-PGTSGEVR 222 (954)
T ss_pred ---CCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC--------cc------cEEEEEEec-CCCCeeec
Confidence 012479999999999887652 35789999987542 11 11 134555555 57899999
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCccc-chhhhhhhcCCCcccEEEEcCcccCCCCCc-----ceeeC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKWLAGVEYANSIAFNPSKWLMVHFD-----CTAMW 375 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~~~gie~aDSi~~d~HK~l~~P~~-----~g~l~ 375 (375)
|+++|+++|+++|+++.||+.+.+..++ .|. .+ .||.++.++|||+ +|.+ +|+|+
T Consensus 223 d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pg------e~-GaDi~vgs~qkfg-~P~g~GGP~aGfla 283 (954)
T PRK05367 223 DYTALIAAAHARGALVAVAADLLALTLLTPPG------EM-GADIAVGSAQRFG-VPMGFGGPHAAYFA 283 (954)
T ss_pred cHHHHHHHHHHcCCEEEEEehhhhccCCCChh------hc-CCCEEEeeCcccC-CCCCCCCCCEEEEE
Confidence 9999999999999999999976333322 221 11 4799999999996 7777 77654
No 228
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.03 E-value=1.1e-08 Score=102.60 Aligned_cols=163 Identities=12% Similarity=0.021 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
-+++.+.|..+|+.+ ...--+++++||.+.=.++..... ++
T Consensus 40 ~~~~~~~L~~v~~t~--------------------~~~~~ll~gsGt~amEAav~sl~~-------------------pg 80 (383)
T COG0075 40 MKEVLEKLRKVFGTE--------------------NGDVVLLSGSGTLAMEAAVASLVE-------------------PG 80 (383)
T ss_pred HHHHHHHHHHHhcCC--------------------CCcEEEEcCCcHHHHHHHHHhccC-------------------CC
Confidence 378889999999876 223356778888776555544322 33
Q ss_pred eEEEecCCCchH--HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596 243 LVAYCSDQAHSS--VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI 320 (375)
Q Consensus 243 ~vV~~S~~aH~S--v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i 320 (375)
..|++....-++ +.+-+...+.+++.|..+..-.+|+++++++|+++.. ...|.+++.-|+||...|+++|+++
T Consensus 81 dkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~ 156 (383)
T COG0075 81 DKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKA 156 (383)
T ss_pred CeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHH
Confidence 455555555444 3334556677888888876677999999999985432 3489999999999999999999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
|++||..++||+.=+.+..-. +..-.|+ |.+....+|.+.+|.|.|++
T Consensus 157 ~k~~g~l~iVDaVsS~Gg~~~---~vd~wgi---Dv~itgSQK~l~~PPGla~v 204 (383)
T COG0075 157 AKEHGALLIVDAVSSLGGEPL---KVDEWGI---DVAITGSQKALGAPPGLAFV 204 (383)
T ss_pred HHHcCCEEEEEecccCCCccc---chhhcCc---cEEEecCchhccCCCcccee
Confidence 999999999999777654322 2112354 99999999999999999876
No 229
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.03 E-value=5.6e-09 Score=105.72 Aligned_cols=144 Identities=9% Similarity=0.089 Sum_probs=108.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
+.+.+.++.+-|-+ ..+++++|+.|+..++.+..+ ++.
T Consensus 67 ~~Le~~la~le~~~-----------------------~~v~~sSG~aAi~~~l~all~-------------------~GD 104 (395)
T PRK05967 67 DALCKAIDALEGSA-----------------------GTILVPSGLAAVTVPFLGFLS-------------------PGD 104 (395)
T ss_pred HHHHHHHHHHhCCC-----------------------CEEEECcHHHHHHHHHHHhcC-------------------CCC
Confidence 66777787764432 368888899988877765422 456
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..+.+....+ ...|.++..++.+ +.++|+++|++. +.+|+++.++|+++.+.||++|++
T Consensus 105 ~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-----~~e~l~~al~~~------TklV~lesPsNP~l~v~dl~~I~~ 173 (395)
T PRK05967 105 HALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-----IGAGIAKLMRPN------TKVVHTEAPGSNTFEMQDIPAIAE 173 (395)
T ss_pred EEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHH
Confidence 8999999998877543 3356777777543 457788888654 348999999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
+|+++|++++||++|+.+...-| +..| ||-+.-+..|++..
T Consensus 174 la~~~g~~vvVD~t~a~p~~~~p----l~~G---aDivv~S~tKy~~G 214 (395)
T PRK05967 174 AAHRHGAIVMMDNTWATPLYFRP----LDFG---VDISIHAATKYPSG 214 (395)
T ss_pred HHHHhCCEEEEECCccCceecCh----hHcC---CCEEEEecccccCC
Confidence 99999999999999987654322 2234 69999999998543
No 230
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.02 E-value=4.2e-09 Score=108.60 Aligned_cols=172 Identities=12% Similarity=-0.003 Sum_probs=122.8
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+++....|+.. .+...++|+|+++|+.+.+.+..+
T Consensus 132 ~G~~~LR~~ia~~l~~~~g~~~-------------------~~~~IiiT~G~q~al~l~~~~l~~--------------- 177 (459)
T COG1167 132 AGLPELREAIAAYLLARRGISC-------------------EPEQIVITSGAQQALDLLLRLLLD--------------- 177 (459)
T ss_pred CCcHHHHHHHHHHHHHhcCCcc-------------------CcCeEEEeCCHHHHHHHHHHHhCC---------------
Confidence 5666677888888887788874 344789999999987765544322
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---cc
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DN 313 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dp 313 (375)
+++.|++.+.+|+....+....|.+++.||+|++| ||+++|+++++... +-++.+.-...++||.+ +.
T Consensus 178 ----pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~~~----~k~~y~~P~~qNPtG~tms~~r 248 (459)
T COG1167 178 ----PGDTVLVEDPTYPGALQALEALGARVIPVPVDEDG-IDPEALEEALAQWK----PKAVYVTPTFQNPTGVTMSLER 248 (459)
T ss_pred ----CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCC-CCHHHHHHHHhhcC----CcEEEECCCCCCCCCCccCHHH
Confidence 46789999999999999999999999999999777 99999999998752 11233333345677776 66
Q ss_pred HHHHHHHHHhcCCEEEEecccccCcccchh---hhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGSSFICPE---FRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~---~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
-++|.++|++||+||+-|..|+-...-.+. .+.+.. -++ =...-++.|.+..-.-+|.
T Consensus 249 R~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~-~~r-Viy~gSFSK~l~PglRlG~ 309 (459)
T COG1167 249 RKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDA-PGR-VIYLGSFSKTLAPGLRLGY 309 (459)
T ss_pred HHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCC-CCC-EEEEeeehhhcccccceee
Confidence 789999999999999999999886543111 111111 001 1244567787765555554
No 231
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.02 E-value=8.8e-09 Score=103.39 Aligned_cols=156 Identities=13% Similarity=0.044 Sum_probs=112.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++++.+++.+|.+. ...++|+|+++++..++.+..+ ++.
T Consensus 89 ~~lr~~ia~~~~~~~---------------------~~I~~t~Ga~~~i~~~~~~~~~-------------------~gd 128 (380)
T PLN03026 89 RRLRAALAEDSGLES---------------------ENILVGCGADELIDLLMRCVLD-------------------PGD 128 (380)
T ss_pred HHHHHHHHHHhCcCh---------------------hhEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence 567788888888762 3578999999998776654321 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++++.++..+...++..|.+++.+|.++++.+|+++|+++++.. .+.+|+.+.++++||.+-+.+++.++++.
T Consensus 129 ~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~ 203 (380)
T PLN03026 129 KIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILEL 203 (380)
T ss_pred EEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhc
Confidence 7888888887777777778889999999878899999999988422 13477778899999999999999999986
Q ss_pred cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
. +|+++|.||.-...- ......+..- .-..+.-++.|.++.
T Consensus 204 ~-~~vi~DeaY~~~~~~-~~~~~~~~~~-~~viv~~SfSK~~gl 244 (380)
T PLN03026 204 P-ILVVLDEAYIEFSTQ-ESRMKWVKKY-DNLIVLRTFSKRAGL 244 (380)
T ss_pred C-CEEEEECcchhhcCC-cchHHHHHhC-CCEEEEecchHhhcC
Confidence 5 999999999654211 1111111111 113567788998763
No 232
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.01 E-value=5.2e-09 Score=104.63 Aligned_cols=156 Identities=11% Similarity=0.010 Sum_probs=105.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+++.+++.+|.+. ...++|+|+++++..++.+... ++.
T Consensus 67 ~~Lr~aia~~~~~~~---------------------~~I~vt~Gs~e~i~~~~~~l~~-------------------~gd 106 (366)
T PRK01533 67 TTLRQTIANKLHVKM---------------------EQVLCGSGLDEVIQIISRAVLK-------------------AGD 106 (366)
T ss_pred HHHHHHHHHHhCCCc---------------------ceEEECCCHHHHHHHHHHHhcC-------------------CCC
Confidence 456666777777762 3588999999998777665422 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH---H
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP---I 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~---i 320 (375)
.|++++.++..+...+...|.+++.||.+ ++.+|+++|++++++. +.+|+.+.++++||.+-+.+++.+ +
T Consensus 107 ~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~~~------~~~v~i~~P~NPTG~~~~~~~l~~l~~~ 179 (366)
T PRK01533 107 NIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVDND------TKIVWICNPNNPTGTYVNDRKLTQFIEG 179 (366)
T ss_pred EEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhCcC------CcEEEEeCCCCCCCCCcCHHHHHHHHHh
Confidence 78899999999999888888999999986 4569999999988643 236777789999999966555555 4
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCc--ccEEEEcCcccCCCC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEY--ANSIAFNPSKWLMVH 368 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~--aDSi~~d~HK~l~~P 368 (375)
|++++ ++++|.+|.....- ......+..++. --.+.-++.|.++.|
T Consensus 180 ~~~~~-~~iiDe~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~ 227 (366)
T PRK01533 180 ISENT-LIVIDEAYYEYVTA-KDFPETLPLLEKHKNILVLRTFSKAYGLA 227 (366)
T ss_pred CCCCC-EEEEEccHHHhhcc-ccCcchhHHhccCCCEEEEeCchHHhcCh
Confidence 55555 67789999743211 000001111111 124567888987644
No 233
>KOG0630|consensus
Probab=98.98 E-value=1.2e-09 Score=110.07 Aligned_cols=129 Identities=22% Similarity=0.314 Sum_probs=102.2
Q ss_pred CceEEEecCCCchHHHH-HHH-HcC--CeEEEEec-C---CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 241 SRLVAYCSDQAHSSVEK-AGL-IGL--VKMRYIES-D---DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~k-aa~-lg~--~~v~~Vp~-d---~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
..+++|+|+..|.-... +|+ +|- ..+..++- | -.|+||...+++.|++|..+|++|.++++..|++.+|.+|
T Consensus 230 aaPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 230 AAPTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred cCceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 46799999999976554 565 443 23444442 2 2469999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhcC-CEEEEecccccCcccchhhhhhhc-CCCcccEEEEcCcccCCCCCc
Q psy1596 313 NLEELGPICEKEG-LWLHVDAAYAGSSFICPEFRKWLA-GVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 313 pl~eI~~ia~~~~-iwlHVDaA~gg~~~~~~~~~~~~~-gie~aDSi~~d~HK~l~~P~~ 370 (375)
.|-.|.+||++++ +|+|.-| +|..++.|.+....+- -.+..||++++.--||++|--
T Consensus 310 mi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSa 368 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSA 368 (838)
T ss_pred HHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCC
Confidence 9999999999997 9999988 6777777755222211 125679999999999999853
No 234
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.97 E-value=7.9e-10 Score=110.49 Aligned_cols=147 Identities=10% Similarity=-0.082 Sum_probs=99.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+++.+.+++++|.+ +....+|+ +|||.++-.++...... +.
T Consensus 44 ~~~r~~l~~l~~~~--------------------~~~~v~f~~gs~T~a~~~~~~~l~~~------------------~~ 85 (361)
T TIGR01366 44 GRVREGLAELFSLP--------------------DGYEVILGNGGATAFWDAATFGLIEK------------------KS 85 (361)
T ss_pred HHHHHHHHHHhCCC--------------------CCceEEEECCchhHHHHHHHHhcccc------------------cc
Confidence 78899999999987 33457786 55999987777543210 11
Q ss_pred eEEEecCCCchHHHH-HHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596 243 LVAYCSDQAHSSVEK-AGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG 318 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~k-aa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~ 318 (375)
.++ +.-.|.+-.. .+.+ .+ +++.++.+....++. .+.+ .+.+|++|+.+|.+|.+.|+++|
T Consensus 86 l~i--~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~-----~~~~------~~~lV~~~h~et~tG~~~pi~~I- 150 (361)
T TIGR01366 86 LHL--SFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEP-----QADP------GVDVIAWAHNETSTGVAVPVRRP- 150 (361)
T ss_pred cEE--ecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCC-----ccCC------CCCEEEEcccCCccceecccccc-
Confidence 233 3333432222 2222 23 567777654443433 1222 25589999999999999999998
Q ss_pred HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
++++|+.++||++++.+....+- +.+|.+++++|||++.|-|.++
T Consensus 151 --~~~~g~~~iVDavqs~g~~~idv--------~~~D~~~~s~~K~lg~~~Gl~~ 195 (361)
T TIGR01366 151 --EGSDDALVVIDATSGAGGLPVDI--------AETDVYYFAPQKNFASDGGLWL 195 (361)
T ss_pred --cccCCCeEEEEcCccccCCCCCH--------HHCCEEEEEchhhcCCCCceEE
Confidence 58899999999999998764431 1269999999999998866555
No 235
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=98.96 E-value=3.2e-08 Score=97.66 Aligned_cols=152 Identities=11% Similarity=-0.004 Sum_probs=107.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+++++++.+|++ +...++|+|+++++...+.+. ++.
T Consensus 58 ~~lr~~ia~~~~~~---------------------~~~I~~t~G~~~~l~~~~~~~---------------------~gd 95 (337)
T PRK03967 58 DPLREAIAEFYGLD---------------------AENIAVGNGSDELISYLVKLF---------------------EGK 95 (337)
T ss_pred HHHHHHHHHHhCcC---------------------cceEEEcCCHHHHHHHHHHHh---------------------CCC
Confidence 45666777777765 245789999999875443221 124
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|+++...+..+...+...|.+++.|+.++++.+|++.|++++.+ ..+++.+.++++||.+-+.++|.++++
T Consensus 96 ~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-------~~~v~~~~P~NPtG~~~~~~~l~~i~~- 167 (337)
T PRK03967 96 HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAKN-------ASAVFICSPNNPTGNLQPEEEILKVLE- 167 (337)
T ss_pred eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHh-
Confidence 688889998877777778888999999988889999999886421 225667889999999999999999995
Q ss_pred cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++++++|.+|+...- ..+.......++ =-+..++.|.++.|
T Consensus 168 ~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~l~S~SK~~~l~ 209 (337)
T PRK03967 168 TGKPVVLDEAYAEFSG--KSLIGLIDEYPN-LILLRTFSKAFGLA 209 (337)
T ss_pred cCCEEEEECchhhhcc--cchHHHHhhCCC-EEEEecchHhhcch
Confidence 7999999999986421 111111111111 13557899987744
No 236
>KOG0256|consensus
Probab=98.96 E-value=1e-08 Score=101.77 Aligned_cols=177 Identities=15% Similarity=0.130 Sum_probs=137.2
Q ss_pred hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
+.|...+++++.+.|.+.-|-+. .| ++...++|.|+|.+|-+.+.+..+
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v---------~f--------dP~~~Vv~~G~T~ane~l~fcLad-------------- 168 (471)
T KOG0256|consen 120 YHGLPSFRQAVAEFMERARGNRV---------KF--------DPERVVVTNGATSANETLMFCLAD-------------- 168 (471)
T ss_pred ccCchHHHHHHHHHHHHHhCCCC---------cc--------CccceEEecccchhhHHHHHHhcC--------------
Confidence 46777788899999999877763 33 566789999999998765554332
Q ss_pred hhhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav- 311 (375)
|+...+++..-+..+.+-++ ..|+++++|.++ +++++++++||+++.+.++.|.+..-|+.|-++++.|.+
T Consensus 169 -----pgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~ 243 (471)
T KOG0256|consen 169 -----PGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTL 243 (471)
T ss_pred -----CCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCcc
Confidence 45678888888888888775 578899888874 578999999999999999999999999999999999998
Q ss_pred --ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc---CCC-cccE--EEEcCcccCCCC
Q psy1596 312 --DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA---GVE-YANS--IAFNPSKWLMVH 368 (375)
Q Consensus 312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~---gie-~aDS--i~~d~HK~l~~P 368 (375)
+.+..+.+.+.++||.+++|..|++...-.++++..+. ..+ .-|. |.++..|=++.|
T Consensus 244 ~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~Glp 308 (471)
T KOG0256|consen 244 SPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLP 308 (471)
T ss_pred CHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCC
Confidence 45777778889999999999999998754444432211 111 2233 678888888877
No 237
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.96 E-value=3.4e-09 Score=105.55 Aligned_cols=155 Identities=10% Similarity=-0.098 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC-hHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT-ASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG-GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
++-+++++.|+++||.| .....+|++| ||+|+-.++...... .
T Consensus 37 ~~~~~~~~~l~~l~~~~--------------------~~~~v~~~~gsgT~a~ea~~~nl~~~-------~--------- 80 (349)
T TIGR01364 37 AVANEAESDLRELLNIP--------------------DNYEVLFLQGGATGQFAAVPLNLLAE-------G--------- 80 (349)
T ss_pred HHHHHHHHHHHHHhCCC--------------------CCceEEEEcCCchHHHHHHHHhcCCC-------C---------
Confidence 33478899999999986 2345677766 999877766543210 0
Q ss_pred cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCC----CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHH
Q psy1596 240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKL----SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLE 315 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g----~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~ 315 (375)
.+.+++..+...|....-+-+++. +..+..++.+ ..|++.++. .+ .+.+|..|...|.||...+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-- 148 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV--VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-- 148 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC--cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc--
Confidence 123466677777777555555654 5556654333 345554441 11 2558999999999999865
Q ss_pred HHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 316 ELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 316 eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
++++.+++.++||++.+.+....+ .+ ..|.+++++||+++ |.|.|++|
T Consensus 149 ---~l~~~~~~l~iVDavss~g~~~id-~~-------~~d~~~~ssqK~lg-P~Glg~l~ 196 (349)
T TIGR01364 149 ---ELPDVKNAPLVADMSSNILSRPID-VS-------KFGLIYAGAQKNIG-PAGLTVVI 196 (349)
T ss_pred ---eecccCCCeEEEEccccccCccCC-HH-------HccEEEEecccccC-CCceEEEE
Confidence 667778999999999999876432 11 23799999999986 99999875
No 238
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.95 E-value=2.1e-09 Score=107.44 Aligned_cols=157 Identities=11% Similarity=-0.075 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
++-+++.+.|+++||.| .....+|++|++.+.+.|...-.-. .+ .
T Consensus 48 ~~~~~~~~~l~~l~~~~--------------------~~~~v~~~~gsgt~~~Ea~~~nl~~------~g---------~ 92 (360)
T PRK05355 48 AVAEEAEADLRELLNIP--------------------DNYKVLFLQGGASLQFAMVPMNLLG------GG---------K 92 (360)
T ss_pred HHHHHHHHHHHHHhCCC--------------------CCcEEEEEcCCchHHHHHHHHhcCC------CC---------C
Confidence 34478999999999986 2345677766666655554332110 00 1
Q ss_pred CceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHH-HHHHhhhcCCccEEEEEEcCCCCccccc-cHHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIE-AIERDKKKHLIPFFVCGTLGTTGACAFD-NLEEL 317 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~-aI~~~~~~g~~p~~Vv~t~GtT~tGavD-pl~eI 317 (375)
+.+++..+...|.+.+-+-+++. . ..++.+. .+..+..++++ +|+++ +.+|..|...|.||... ||++|
T Consensus 93 ~~l~i~~G~fg~r~~~~a~~~g~-~-~~~~~~~~~g~~~~~~~~~~~l~~~------~~~V~~th~eTstGv~~~~i~~i 164 (360)
T PRK05355 93 KADYVDTGSWSKKAIKEAKKYGE-V-NVAASSEDDGFTYIPPLDEWQLSDD------AAYVHYTSNETIDGTEFHELPDT 164 (360)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-c-eEEecccccCCCCCCChhhccCCCC------CCEEEEccCCCcceEecCccccc
Confidence 23567778888888665556663 3 5555543 56666666666 56432 45899999999999996 78777
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+|+.++||++.+.+....+- + ..|.++++.||+++ |.|.|++|
T Consensus 165 ------~g~l~vVDavss~g~~~idv-----~---~~d~~~~ssqK~lg-P~Glg~l~ 207 (360)
T PRK05355 165 ------GDVPLVADMSSDILSRPIDV-----S---KFGLIYAGAQKNIG-PAGLTIVI 207 (360)
T ss_pred ------CCCcEEEEcCccccCccCCH-----H---HccEEEEecccccc-CCceEEEE
Confidence 89999999999998764321 1 23799999999876 99999885
No 239
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.95 E-value=3.7e-09 Score=105.37 Aligned_cols=168 Identities=18% Similarity=0.095 Sum_probs=114.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH-HHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS-ESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT-~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+.++..+-+.+|++ +....++++.+| ++..+++.+.|.+ + ..
T Consensus 59 n~l~~d~~~~~G~~--------------------~~~~~~~vP~atgm~l~l~l~~l~~r--~---------------~a 101 (389)
T PF05889_consen 59 NSLVLDALRLAGLR--------------------SVKSCFVVPMATGMSLTLCLLALRMR--P---------------KA 101 (389)
T ss_dssp HHHHHHHHHHTTHT--------------------THCEEEEESS-HHHHHHHHHHHHHHH--C---------------T-
T ss_pred HHHHHHHHHHcCCc--------------------cccceEEEecccccHHHHHHHHHhcc--c---------------CC
Confidence 55555566668887 334567788887 5666777777622 1 12
Q ss_pred eEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNLEELG 318 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl~eI~ 318 (375)
..|+.+...|+|-.||+...|.+++.||. .+.-..|.+++|++|++. |..+.+++.|.-+-..+-. |++.+|+
T Consensus 102 ~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~Ia 178 (389)
T PF05889_consen 102 KYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIA 178 (389)
T ss_dssp -EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHH
T ss_pred ceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHH
Confidence 36889999999999999999999999985 344567789999999654 3346778888766667766 6699999
Q ss_pred HHHHhcCCEEEEecccccCcccchhhhhhhc---CCCcccEEEEcCcccCCCCCcceee
Q psy1596 319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLA---GVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~---gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
+||++||++..|.+|||.-.-. +.+++. -..+.|.+.-+.-|-+.+|.|-+++
T Consensus 179 kiC~~~~IPhlvNnAYgvQ~~~---~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~ 234 (389)
T PF05889_consen 179 KICKEYDIPHLVNNAYGVQSSK---CMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIM 234 (389)
T ss_dssp HHHHHHT--EEEEGTTTTT-HH---HHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEE
T ss_pred HHHHHcCCceEEccchhhhHHH---HHHHHHHHHhcCCcceeeeecCCCEEecCCCcEE
Confidence 9999999999999999995321 111111 1236788888888888888776553
No 240
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=98.95 E-value=1.2e-08 Score=101.13 Aligned_cols=153 Identities=12% Similarity=-0.016 Sum_probs=109.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR- 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~- 242 (375)
.++.+.+++.+|.+. ...++|+|+++++..++.+... ++
T Consensus 63 ~~Lr~aia~~~~~~~---------------------~~I~it~Gs~~~i~~~~~~~~~-------------------~g~ 102 (354)
T PRK04635 63 PELINAYSAYAGVAP---------------------EQILTSRGADEAIELLIRAFCE-------------------PGQ 102 (354)
T ss_pred HHHHHHHHHHhCcCH---------------------HHEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence 566777778788762 3589999999998777654321 22
Q ss_pred eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
..|++.+.++..+...++..|.+++.||.++++.+|++.+++ + . .+.+|+.+.++++||.+-+.+++.++++
T Consensus 103 d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~ 174 (354)
T PRK04635 103 DSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIE 174 (354)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHH
Confidence 468888898888888788888899999998788999998873 3 1 1347778899999999999999999887
Q ss_pred hc-CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 323 KE-GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 323 ~~-~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
.. ++++++|+||.-.... ..........+.. .+.-+++|+++
T Consensus 175 ~~~~~~vivDeay~~~~~~-~s~~~~~~~~~~~-iv~~S~SK~~~ 217 (354)
T PRK04635 175 MTPDAIVVVDEAYIEFCPE-YSVADLLASYPNL-VVLRTLSKAFA 217 (354)
T ss_pred hCCCcEEEEeCchHhhccC-cchHHHHhhCCCE-EEEechHHHhh
Confidence 63 6999999999764311 0111111111111 35678999876
No 241
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.95 E-value=2.6e-08 Score=100.26 Aligned_cols=159 Identities=13% Similarity=0.082 Sum_probs=105.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|++++|.+ ..+|+++||+||..|+.++|.....+ + +.+. .+..
T Consensus 86 ~~l~~~l~~~~~~~-----------------------~~~~~~SGs~A~e~al~~a~~~~~~~-~-g~~~------~~~~ 134 (401)
T PRK00854 86 APLYEELAALTGSH-----------------------KVLPMNSGAEAVETAIKAVRKWGYEV-K-GVPE------GQAE 134 (401)
T ss_pred HHHHHHHHhhCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHHHHhc-c-CCCC------CCce
Confidence 67778888887654 47999999999999999998642110 0 0000 0123
Q ss_pred EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
+|..+..-|-+..-+..+++ ..++.+|. .|+++|+++|.+. +.+|+.....+++|.+
T Consensus 135 vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~------~~aii~e~~~~~~G~~ 203 (401)
T PRK00854 135 IIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAITPN------TVAFLVEPIQGEAGVI 203 (401)
T ss_pred EEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCC------eEEEEEccccCCCCCc
Confidence 56666666776554443321 12334442 4889999988642 4478888888999998
Q ss_pred cc----HHHHHHHHHhcCCEEEEecccccCcccchh-hhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPE-FRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~-~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
-| +++|+++|++||+++++|++|.+... .+. +.....++ .+|.++++ |++..-
T Consensus 204 ~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg 261 (401)
T PRK00854 204 IPPAGYFTRVRELCTANNVTLILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGG 261 (401)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCC
Confidence 65 99999999999999999999985322 221 11112343 35877775 887644
No 242
>PLN02672 methionine S-methyltransferase
Probab=98.94 E-value=2.4e-08 Score=111.24 Aligned_cols=134 Identities=19% Similarity=0.241 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
++...+.+|+++..|++. ++ ...++|+|+++++..++.+..+
T Consensus 734 dlr~aLa~~la~~~Gv~~-------------------d~~e~IIvt~Gs~elL~lll~aLl~------------------ 776 (1082)
T PLN02672 734 DPRPSILQFIKSNYGFPT-------------------DSCTEFVYGDTSLALFNKLVLCCVQ------------------ 776 (1082)
T ss_pred HHHHHHHHHHHHHhCcCC-------------------CCCCEEEEeCCHHHHHHHHHHHHcC------------------
Confidence 345899999999999983 22 2456666655555455443322
Q ss_pred cCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC-CCcccc---cc
Q psy1596 240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT-TGACAF---DN 313 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt-T~tGav---Dp 313 (375)
++..|++...++..+..++.+.|.+++.||++ +++.+|.+.|++++++... + +|+.+.++ |+||.+ +.
T Consensus 777 -pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~----~-~I~L~nPnhNPTG~v~S~ee 850 (1082)
T PLN02672 777 -EGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKK----P-WVYISGPTINPTGLLYSNSE 850 (1082)
T ss_pred -CCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC----C-EEEEECcCCCCcCccCCHHH
Confidence 34578899999999999999889999999986 3688999999999854211 2 57777776 999998 67
Q ss_pred HHHHHHHHHhcCCEEEEecccccC
Q psy1596 314 LEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 314 l~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
+++|+++|++||++|++|.+|+..
T Consensus 851 Le~Llela~k~di~VIsDEaYsdL 874 (1082)
T PLN02672 851 IEEILSVCAKYGARVIIDTSFSGL 874 (1082)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCcc
Confidence 889999999999999999999854
No 243
>PRK05839 hypothetical protein; Provisional
Probab=98.94 E-value=1e-08 Score=102.60 Aligned_cols=135 Identities=10% Similarity=-0.004 Sum_probs=100.1
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
|...+++.+.+|+++..|.+. ++...++|+|++++....+.+....
T Consensus 61 G~~~lr~aia~~l~~~~g~~~-------------------~~~~I~it~G~~~al~~~~~~~~~~--------------- 106 (374)
T PRK05839 61 GEESLREAQRGFFKRRFKIEL-------------------KENELIPTFGTREVLFNFPQFVLFD--------------- 106 (374)
T ss_pred CCHHHHHHHHHHHHHHhCCCC-------------------CcceEEEecCcHHHHHHHHHHHhcC---------------
Confidence 455677888899999888763 3456888999998876655443210
Q ss_pred hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596 238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D 312 (375)
Q Consensus 238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D 312 (375)
.++..|+++..++..+...+...|.+++.||.+++ +.+|.++. .++ . +.+|+.+.++|+||.+ +
T Consensus 107 --~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~~-~------~k~v~i~nP~NPTG~~~s~~ 175 (374)
T PRK05839 107 --KQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--ELQ-E------VDLVILNSPNNPTGRTLSLE 175 (374)
T ss_pred --CCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hhc-c------ccEEEEeCCCCCcCcccCHH
Confidence 02357889999999999998888899999998643 55554433 221 1 3366777899999987 6
Q ss_pred cHHHHHHHHHhcCCEEEEecccccC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
.+++|+++|+++|+||++|.+|+-.
T Consensus 176 ~l~~i~~~~~~~~~~ii~DE~Y~~~ 200 (374)
T PRK05839 176 ELIEWVKLALKHDFILINDECYSEI 200 (374)
T ss_pred HHHHHHHHHHHcCCEEEeccchhhc
Confidence 6888889999999999999999864
No 244
>PRK07908 hypothetical protein; Provisional
Probab=98.94 E-value=3e-08 Score=97.96 Aligned_cols=154 Identities=16% Similarity=0.081 Sum_probs=105.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+++++++.+|.+. ...++|+|+++++..++. . . ++
T Consensus 61 ~~lr~aia~~~~~~~---------------------~~I~it~Ga~~al~~~~~-l-~-------------------~~- 97 (349)
T PRK07908 61 RRARAAVAARHGRTP---------------------DEVLLLAGAAEGFALLAR-L-R-------------------PR- 97 (349)
T ss_pred HHHHHHHHHHhCcCh---------------------hhEEECCCHHHHHHHHHh-c-C-------------------CC-
Confidence 566777777778762 358999999999876554 1 1 12
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.+++...+.......++..|.+++.+|.++++.+|+++++ +. +.+++.+.++++||.+-+.++|.++|++
T Consensus 98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l~----~~------~~~i~l~np~NPTG~~~~~~~l~~l~~~ 167 (349)
T PRK07908 98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAVP----DD------ADLVVIGNPTNPTSVLHPAEQLLALRRP 167 (349)
T ss_pred eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHhc----cC------CCEEEEcCCCCCCCCCcCHHHHHHHHhc
Confidence 2344567776667777778889999999877889998653 11 3367778899999999999999999975
Q ss_pred cCCEEEEecccccCcccchhhhhhhcCCCcccEEEE-cCcccCC-CCCcceee
Q psy1596 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF-NPSKWLM-VHFDCTAM 374 (375)
Q Consensus 324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~-d~HK~l~-~P~~~g~l 374 (375)
+.++++|++|+-... . .. ..+.....-+.+.+ +++|.++ ...-+|.+
T Consensus 168 -~~~iIvDe~y~~~~~-~-~~-~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~ 216 (349)
T PRK07908 168 -GRILVVDEAFADAVP-G-EP-ESLAGDDLPGVLVLRSLTKTWSLAGLRVGYA 216 (349)
T ss_pred -CCEEEEECcchhhcc-C-Cc-cccccccCCCEEEEeecccccCCccceeeee
Confidence 889999999975321 1 10 01111222356777 8999775 33445654
No 245
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=98.93 E-value=3.1e-08 Score=103.54 Aligned_cols=145 Identities=10% Similarity=0.066 Sum_probs=101.1
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc--CCeEEEEecCC--C--
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG--LVKMRYIESDD--K-- 274 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg--~~~v~~Vp~d~--~-- 274 (375)
..++|+||++++..++.+.....+ +.+++.|++....+..+...+.+. +.+++.|+.++ +
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~l--------------l~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g 222 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANEL--------------LKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDG 222 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhc--------------CCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccc
Confidence 688999999998887765322111 124568999999999988887764 56777887742 2
Q ss_pred ---CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhc--CCEEEEecccccCcccchhhhh
Q psy1596 275 ---LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKE--GLWLHVDAAYAGSSFICPEFRK 346 (375)
Q Consensus 275 ---g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~--~iwlHVDaA~gg~~~~~~~~~~ 346 (375)
+++|.++|++++++. +.+|+++.++|+||.+ +.+++|+++|+++ ++||++|.+|+-... .+..
T Consensus 223 ~~~~~~d~~~l~~~~~~~------~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s 293 (521)
T TIGR03801 223 THTWQYPDKELEKLRDPS------IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRS 293 (521)
T ss_pred cccCCCCHHHHHHhcCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccc
Confidence 789999999876543 3377777899999998 4588889999987 999999999986431 1111
Q ss_pred hhcCCCcccEEEEcCcccCCCC
Q psy1596 347 WLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 347 ~~~gie~aDSi~~d~HK~l~~P 368 (375)
...-...--.+.-++.|.+++|
T Consensus 294 l~~~~~~~vI~v~SfSK~fg~~ 315 (521)
T TIGR03801 294 LFAELPYNTIGVYSFSKYFGAT 315 (521)
T ss_pred hhhhCCCCEEEEEcchhhccCc
Confidence 1111111124556888977543
No 246
>PRK08637 hypothetical protein; Provisional
Probab=98.92 E-value=5.4e-08 Score=97.76 Aligned_cols=143 Identities=10% Similarity=-0.043 Sum_probs=101.0
Q ss_pred cchhHHHHHHHHHHHHHcC-CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENA-TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG-~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++.+.+++.+.-+ +.. + +....++|+|+++++.+.+.+..+
T Consensus 44 ~G~~~lr~~ia~~~~~~~~~~~~--------~----------~~~~I~it~G~~~al~~~~~~l~~-------------- 91 (388)
T PRK08637 44 QGIPELRDLWQEKMLRENPSLSG--------K----------KMSLPIVTNALTHGLSLVADLFVD-------------- 91 (388)
T ss_pred CCCHHHHHHHHHHHhccCccccc--------c----------ccceeeEccchHHHHHHHHHHhcC--------------
Confidence 4566666666667665432 110 0 113468899999988776654322
Q ss_pred hhhhcCceEEEecCCCchHHHHHH-HHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAG-LIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-- 311 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa-~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-- 311 (375)
++..|++...++..+...+ ...|.+++.||.+ +++.+|+++|+++++..... ...+++.+.++++||.+
T Consensus 92 -----~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~~~s 164 (388)
T PRK08637 92 -----QGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNK--GKVIVILNFPNNPTGYTPT 164 (388)
T ss_pred -----CCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccC--CCEEEEEeCCCCCCCCCCC
Confidence 3457899999998888875 4678899999983 55679999999998721111 13456667789999987
Q ss_pred -ccHHHHHHHHHh-----cCCEEEEecccccCc
Q psy1596 312 -DNLEELGPICEK-----EGLWLHVDAAYAGSS 338 (375)
Q Consensus 312 -Dpl~eI~~ia~~-----~~iwlHVDaA~gg~~ 338 (375)
+.+++|+++|++ +++||++|.+|....
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~ 197 (388)
T PRK08637 165 EKEATAIVEAIKELADAGTKVVAVVDDAYFGLF 197 (388)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEecccchhcc
Confidence 668888888775 899999999998653
No 247
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.92 E-value=7.6e-08 Score=95.59 Aligned_cols=138 Identities=14% Similarity=0.105 Sum_probs=95.0
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCc
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSL 277 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~m 277 (375)
...++|+|+++++..++.+. . + ..|++.+.++..+...+...|.+++.+|.++ ++.+
T Consensus 72 ~~i~it~Ga~~~l~~~~~~~-~-------------------~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 130 (354)
T PRK06358 72 ENVILGNGATELIFNIVKVT-K-------------------P-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAA 130 (354)
T ss_pred hhEEECCCHHHHHHHHHHHh-C-------------------C-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCc
Confidence 45899999999987666532 1 1 2477888888888888888888999999864 3578
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA 354 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a 354 (375)
| +++.+.+.+. +.+|+.+.++++||.+- .+.+|+++|+++++|+++|.+|.-...- +.....+..+...
T Consensus 131 d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~-~~~~~~~~~~~~~ 202 (354)
T PRK06358 131 N-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEE-NETISMINYLENF 202 (354)
T ss_pred c-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCC-ccchhHHHhccCC
Confidence 8 5555555321 34677788999999884 5889999999999999999999765421 1100111111111
Q ss_pred c--EEEEcCcccCC
Q psy1596 355 N--SIAFNPSKWLM 366 (375)
Q Consensus 355 D--Si~~d~HK~l~ 366 (375)
+ -+.-++.|.++
T Consensus 203 ~~vi~~~S~SK~~g 216 (354)
T PRK06358 203 KNLIIIRAFTKFFA 216 (354)
T ss_pred CCEEEEEechhhcc
Confidence 1 34568889876
No 248
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.90 E-value=4.3e-08 Score=98.80 Aligned_cols=165 Identities=16% Similarity=0.079 Sum_probs=105.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|+++.+.+ ..+|+++||+||..|+.++|.......+. .. .++.
T Consensus 85 ~~l~~~l~~~~~~~-----------------------~~~~~~SGseA~e~Alk~a~~~~~~~~g~-~~-------~r~~ 133 (396)
T PRK04073 85 GPWYEKVAKLTGKD-----------------------MVLPMNTGAEAVETAIKAARRWAYDVKGV-EP-------NKAE 133 (396)
T ss_pred HHHHHHHHhcCCCC-----------------------eEEEcCChHHHHHHHHHHHHHHhhhccCC-CC-------CCCE
Confidence 56777787776543 46899999999999999998752110000 00 0123
Q ss_pred EEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
+|.+...-|-+..-++.+.+.. +..+|.+ |+++|++++++. +.+|+++...+++|.+
T Consensus 134 ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~~~------~~~viiep~~~~~G~~ 202 (396)
T PRK04073 134 IIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAAITPN------TAAFLVEPIQGEAGIN 202 (396)
T ss_pred EEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHhcccC------eEEEEEcCccCCCCCc
Confidence 5555566776666665543311 2333322 789999888532 4477788787889987
Q ss_pred cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596 312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA 373 (375)
Q Consensus 312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~ 373 (375)
-| +++|.++|++||+++++|++|.+....-..+.....++ ..|.+++ .|.++.+ +..|.
T Consensus 203 ~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~ 266 (396)
T PRK04073 203 IPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISC 266 (396)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceE
Confidence 44 89999999999999999999987432111111112233 3687776 5987765 44444
No 249
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.89 E-value=4.1e-08 Score=102.72 Aligned_cols=145 Identities=10% Similarity=0.088 Sum_probs=99.8
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC--CeEEEEecC--CCCC
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL--VKMRYIESD--DKLS 276 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~--~~v~~Vp~d--~~g~ 276 (375)
..++|+||++++..++.+.....+ +.+++.|++....+..+...+.+.+ .+++.++.+ +++.
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~l--------------l~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~ 228 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGL--------------LKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQ 228 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhc--------------CCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCC
Confidence 689999999998888775332111 1245689999999999988887754 455666654 4588
Q ss_pred cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHh--cCCEEEEecccccCcccchhhhhhhcCC
Q psy1596 277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEK--EGLWLHVDAAYAGSSFICPEFRKWLAGV 351 (375)
Q Consensus 277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~--~~iwlHVDaA~gg~~~~~~~~~~~~~gi 351 (375)
+|+++|++++++. +.+|+++.++|+||.+ +.+++|+++|++ +++||++|.+|+-... .+.....-+
T Consensus 229 ~d~~~l~~~~~~~------tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~ 299 (527)
T PRK09275 229 YPDSELEKLRDPS------IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVL 299 (527)
T ss_pred CCHHHHHhhcCCC------CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhC
Confidence 9999999977543 3477788899999998 458888999965 5999999999987531 111111111
Q ss_pred CcccEEEEcCcccCCCC
Q psy1596 352 EYANSIAFNPSKWLMVH 368 (375)
Q Consensus 352 e~aDSi~~d~HK~l~~P 368 (375)
..--.+.-++.|.+++|
T Consensus 300 ~~~~I~v~SfSK~f~mt 316 (527)
T PRK09275 300 PYNTILVYSFSKYFGAT 316 (527)
T ss_pred CCCEEEEeehhhhccCc
Confidence 11123455778876543
No 250
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=98.89 E-value=8.1e-08 Score=96.46 Aligned_cols=167 Identities=13% Similarity=0.047 Sum_probs=107.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.+++++|.+ ..+|+++||+||..|+..+|.....+.+. + ..+..
T Consensus 76 ~~~~~~l~~~~~~~-----------------------~~~~~~SGs~A~e~al~~~~~~~~~~~~~--~------~~~~~ 124 (400)
T PTZ00125 76 GLAEKYITDLFGYD-----------------------KVLPMNSGAEAGETALKFARKWGYEVKGI--P------ENQAK 124 (400)
T ss_pred HHHHHHHHhCCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHHHHhccCC--C------CCCCe
Confidence 66777777776654 36899999999999999998642111000 0 00233
Q ss_pred EEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
++.....-|-+...++.+.+.. +..++. .|+++|+++++.. .+.+|++.-..+++|.+
T Consensus 125 vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~-----~~~~v~~ep~~~~~G~~ 194 (400)
T PTZ00125 125 IIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY-----NDVEALEKLLQDP-----NVAAFIVEPIQGEAGVI 194 (400)
T ss_pred EEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC-----CCHHHHHHHhCCC-----CeEEEEEcCccCCCCCc
Confidence 5666666777776666543321 122222 3899999998621 24466666667788987
Q ss_pred cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC-cceee
Q psy1596 312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF-DCTAM 374 (375)
Q Consensus 312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~-~~g~l 374 (375)
-+ +++|.++|++||+++++|++|.+.......+.....++ ..|.++++ |++..++ ..|++
T Consensus 195 ~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v 259 (400)
T PTZ00125 195 VPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAV 259 (400)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEE
Confidence 66 99999999999999999999975322111111112344 35888775 9988665 56644
No 251
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.88 E-value=1.1e-07 Score=95.89 Aligned_cols=164 Identities=13% Similarity=0.023 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
...++.+.|++++|.+ ..+|+++|++||..|+..+|.....+.+. ...
T Consensus 80 ~~~~l~~~l~~~~~~~-----------------------~~~~~~SGs~A~e~ai~~a~~~~~~~~~~---------~~~ 127 (401)
T TIGR01885 80 VFGEFAEYVTKLFGYD-----------------------KVLPMNTGAEAVETAIKLARKWGYKVKGI---------PEN 127 (401)
T ss_pred HHHHHHHHHHhhcCCC-----------------------EEEEeCccHHHHHHHHHHHHHHhhhhcCC---------CCC
Confidence 3477888888888765 36899999999999999998753211000 012
Q ss_pred ceEEEecCCC-chHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596 242 RLVAYCSDQA-HSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA 308 (375)
Q Consensus 242 ~~vV~~S~~a-H~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t 308 (375)
+.+|++.+.+ |-+..-++.+.+. .+..+|.+ |+++|+++|++.. ....+|+.....+++
T Consensus 128 ~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~avi~E~v~~~~ 199 (401)
T TIGR01885 128 QAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHG---PNVCAFIVEPIQGEA 199 (401)
T ss_pred CCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhcC---CCEEEEEEeCccCCC
Confidence 3466666666 5565666555321 23344432 7899999996531 223455555455567
Q ss_pred ccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 309 CAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 309 GavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
|.+-+ +++|.++|++||+++++|++|.+.......+.....++ ..|.++++ |.+...
T Consensus 200 G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g 260 (401)
T TIGR01885 200 GVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGG 260 (401)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCC
Confidence 88765 99999999999999999999865322111111112233 46888875 987643
No 252
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.88 E-value=3.2e-08 Score=98.22 Aligned_cols=128 Identities=11% Similarity=0.048 Sum_probs=94.0
Q ss_pred cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++++.+|+.+..|.+ . ++...++|+|++++...++.+..-
T Consensus 56 ~G~~~lr~~ia~~~~~~~~~~~~-------------------~~~~I~it~G~~~~i~~~~~~l~~-------------- 102 (357)
T TIGR03539 56 WGTPELREAIVDWLERRRGVPGL-------------------DPTAVLPVIGTKELVAWLPTLLGL-------------- 102 (357)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCC-------------------CcCeEEEccChHHHHHHHHHHHcC--------------
Confidence 466777789999999888875 3 345688899999987665443210
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D 312 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D 312 (375)
.++..|++++.+|.++..++...|.+++.++ |++.|+. . .+.+|+.+.++++||.+ +
T Consensus 103 ----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l~~----~-----~~~~v~~~~p~NPtG~~~~~~ 162 (357)
T TIGR03539 103 ----GPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTELDP----V-----GPDLIWLNSPGNPTGRVLSVD 162 (357)
T ss_pred ----CCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------ChhhcCc----c-----CccEEEEeCCCCCcCccCCHH
Confidence 1345788999999999888877777776663 2333321 1 24467777899999986 4
Q ss_pred cHHHHHHHHHhcCCEEEEecccccC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
.+++|+++|+++|+|+++|.+|+..
T Consensus 163 ~~~~i~~~a~~~~~~ii~De~y~~~ 187 (357)
T TIGR03539 163 ELRAIVAWARERGAVVASDECYLEL 187 (357)
T ss_pred HHHHHHHHHHHcCeEEEEecchhhh
Confidence 6888999999999999999999753
No 253
>PRK06434 cystathionine gamma-lyase; Validated
Probab=98.88 E-value=4e-08 Score=99.22 Aligned_cols=148 Identities=13% Similarity=0.084 Sum_probs=102.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.++++.|.+ ..+.+++|+.|+.+++.+... ++.
T Consensus 67 ~~lE~~la~leg~~-----------------------~av~~sSG~aAi~~al~all~-------------------~GD 104 (384)
T PRK06434 67 QAFEEKYAVLENAE-----------------------HALSFSSGMGAITSAILSLIK-------------------KGK 104 (384)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence 66777788888765 368999999998888865421 345
Q ss_pred EEEecCCCchHHH----HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVE----KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~----kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...+.... ..+...|.+++.+++++...++ ++.+ .+.+|+....++.++.+.||++|++
T Consensus 105 ~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~-------l~~~-----~tklv~~e~~snpt~~v~Di~~I~~ 172 (384)
T PRK06434 105 RILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD-------FDPS-----NYDLIYAESITNPTLKVPDIKNVSS 172 (384)
T ss_pred EEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee-------ecCC-----CeeEEEEEcCCCCCceeecHHHHHH
Confidence 6777765322222 3334467888888876422222 1111 1447888889999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM 374 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l 374 (375)
+|++++ +.||++++.....-| + + ..+|.+++|+||++..+-+ .|++
T Consensus 173 la~~~~--lvVD~t~~s~~~~~p-----l-~-~gaDivv~S~tK~i~G~~d~~gG~v 220 (384)
T PRK06434 173 FCHEND--VIVDATFASPYNQNP-----L-D-LGADVVIHSATKYISGHSDVVMGVA 220 (384)
T ss_pred HHHHcC--eEEECCCCCcccCCc-----h-h-cCCCEEEeecccccCCCCCceEEEE
Confidence 999998 567999976533211 1 1 1479999999999988776 5554
No 254
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.87 E-value=6.6e-08 Score=96.69 Aligned_cols=169 Identities=15% Similarity=0.040 Sum_probs=111.5
Q ss_pred chhHHHHHHHHHHHHHcC--CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 158 DRDKYSSKVLDFVSKENA--TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG--~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
|...+++.+.+|+.+..| ++. ++...++|+|+++++..++.+....
T Consensus 67 G~~~Lr~aia~~~~~~~~~~~~v-------------------~~~~I~it~Ga~~al~~~~~~~~~~------------- 114 (374)
T PRK02610 67 GHEALKQAIAEYVNESAAGSSQI-------------------TPANISVGNGSDELIRSLLIATCLG------------- 114 (374)
T ss_pred chHHHHHHHHHHhCccccccCCC-------------------CHHHEEEcCChHHHHHHHHHHHcCC-------------
Confidence 556666777777776542 332 3345889999999876655443210
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL 314 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl 314 (375)
++..|++.+.++..+...++..|.+++.++.++ ++.+|+++|++++++... ..+.+|+.+.++++||.+-+.
T Consensus 115 -----g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~--~~~k~i~l~~P~NPTG~~~s~ 187 (374)
T PRK02610 115 -----GEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQN--PPVRVVFVVHPNSPTGNPLTA 187 (374)
T ss_pred -----CCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCCCCH
Confidence 112688899999999988888899999999865 478999999999865211 124577777899999999665
Q ss_pred HHHHHHHH-hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 315 EELGPICE-KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 315 ~eI~~ia~-~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++..+.+ .+++||++|.+|.-..... .... +..... =-+.-++.|.++.|
T Consensus 188 ~~l~~l~~~~~~~~iI~De~Y~~~~~~~-~~~~-~~~~~~-~ivi~SfSK~~g~~ 239 (374)
T PRK02610 188 AELEWLRSLPEDILVVIDEAYFEFSQTT-LVGE-LAQHPN-WVILRTFSKAFRLA 239 (374)
T ss_pred HHHHHHHhccCCcEEEEeccccccCccc-hHHH-HhcCCC-EEEEEecchhccCc
Confidence 55555442 1489999999997643211 1111 111111 13567889988544
No 255
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.86 E-value=3.8e-08 Score=97.82 Aligned_cols=159 Identities=9% Similarity=0.021 Sum_probs=106.7
Q ss_pred cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|...+++.+.+|+.+..|.+ . ++...++|+|+++++..++.+..-
T Consensus 62 ~G~~~lr~~ia~~l~~~~~~~~~-------------------~~~~I~it~G~~~~i~~~~~~l~~-------------- 108 (364)
T PRK07865 62 AGTPELREAIVGWLARRRGVTGL-------------------DPAAVLPVIGSKELVAWLPTLLGL-------------- 108 (364)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCC-------------------CcccEEEccChHHHHHHHHHHHcC--------------
Confidence 456677789999999888875 3 345688999999987664443210
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D 312 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D 312 (375)
.++..|++++.+|.++..++...|.+++.++ +.+++++ ..+.+|+.+.++++||.+ +
T Consensus 109 ----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-------~~~~l~~---------~~~~~v~~~~p~NPtG~~~~~~ 168 (364)
T PRK07865 109 ----GPGDVVVIPELAYPTYEVGARLAGATVVRAD-------SLTELGP---------QRPALIWLNSPSNPTGRVLGVD 168 (364)
T ss_pred ----CCCCEEEECCCCcccHHHHHHhcCCEEEecC-------ChhhCCc---------ccceEEEEcCCCCCCCccCCHH
Confidence 1345788999999999988887787777764 2233321 124567777899999976 6
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccchhh---hhhhcCCC-cccEEEEcCcccCCCC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEF---RKWLAGVE-YANSIAFNPSKWLMVH 368 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~---~~~~~gie-~aDSi~~d~HK~l~~P 368 (375)
.+++|+++|+++|+|+++|.+|+....-.+.. .....+.. .-..++-++.|.++.|
T Consensus 169 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 228 (364)
T PRK07865 169 HLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLA 228 (364)
T ss_pred HHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCC
Confidence 68899999999999999999998643211000 00000100 1135677899987543
No 256
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.86 E-value=6.2e-08 Score=96.32 Aligned_cols=170 Identities=14% Similarity=0.033 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
...++.+++++++|.+ ..+++.||++++..++.+++..... .+. .+
T Consensus 70 ~~~~l~~~la~~~g~~-----------------------~~~~~~sg~~a~~~a~~~~~~~~~~-~~~----------~~ 115 (379)
T TIGR00707 70 PQEELAEKLVEHSGAD-----------------------RVFFCNSGAEANEAALKLARKYTGD-KGK----------EK 115 (379)
T ss_pred HHHHHHHHHHhhCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHHhhc-cCC----------CC
Confidence 3478899999998865 3789999999999999887643210 000 01
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeE---EEEecCCCCCc----CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKM---RYIESDDKLSL----RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v---~~Vp~d~~g~m----d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
+.+++.+..-|.+...+...++... ...+...+... |+++|++.+.+. +.+|+.+..++.+|.+
T Consensus 116 ~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~ 189 (379)
T TIGR00707 116 KKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDE------TAAVIVEPIQGEGGVNPAS 189 (379)
T ss_pred CeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhC------eeEEEEEccccCCCCccCC
Confidence 2244444444555444443332211 11222222222 899999988653 3356666555555643
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
+++++|.++|+++++++++|++|.+.............++ ..|.++ +.|.++..+..|.+
T Consensus 190 ~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~ 250 (379)
T TIGR00707 190 AEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGAT 250 (379)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEE
Confidence 4699999999999999999999975422111011111232 246554 58999865666654
No 257
>PRK07505 hypothetical protein; Provisional
Probab=98.85 E-value=8.3e-08 Score=96.88 Aligned_cols=161 Identities=16% Similarity=0.057 Sum_probs=106.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
.+...++.+.|++++|.. .+++++|++||..++..++..... .
T Consensus 90 ~~~~~~l~~~la~~~~~~------------------------~~~~~sG~~a~~~ai~~~~~~~~~---~---------- 132 (402)
T PRK07505 90 SQILKDLEEALSELFGAS------------------------VLTFTSCSAAHLGILPLLASGHLT---G---------- 132 (402)
T ss_pred hHHHHHHHHHHHHHhCCC------------------------EEEECChHHHHHHHHHHHHhcccC---C----------
Confidence 344578889999988753 477778899999888766532100 0
Q ss_pred cCceEEEecCCCchHHHHH--HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 240 NSRLVAYCSDQAHSSVEKA--GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~ka--a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
.++.+|+.+...|.|+... ....+.+++.+|.+ |+++|++++++. +.+++++.+.+.+|.+.++++|
T Consensus 133 ~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~~~~~------~~~~vl~~p~~~~G~~~~~~~i 201 (402)
T PRK07505 133 GVPPHMVFDKNAHASLNILKGICADETEVETIDHN-----DLDALEDICKTN------KTVAYVADGVYSMGGIAPVKEL 201 (402)
T ss_pred CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC-----CHHHHHHHHhcC------CCEEEEEecccccCCcCCHHHH
Confidence 0223667778999987542 22234577788763 889999988643 2367777888999999999999
Q ss_pred HHHHHhcCCEEEEecccccCcc--cchhhhhhhcCC--CcccEEEEcCcccCCCC
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSF--ICPEFRKWLAGV--EYANSIAFNPSKWLMVH 368 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~--~~~~~~~~~~gi--e~aDSi~~d~HK~l~~P 368 (375)
.++|++++++|++|++|+.+.+ ....+.....++ ....-++.++-|.++.+
T Consensus 202 ~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~ 256 (402)
T PRK07505 202 LRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS 256 (402)
T ss_pred HHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc
Confidence 9999999999999999853211 111111111122 12234455888987654
No 258
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.84 E-value=6.3e-08 Score=100.58 Aligned_cols=164 Identities=13% Similarity=0.051 Sum_probs=123.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+..++.||.+. .-.++.|.|.||...+.+... ++.
T Consensus 73 ~eAqe~aA~~fgAd~----------------------tyFvvNGTS~ank~vi~a~~~-------------------~GD 111 (557)
T COG1982 73 KEAQELAARVFGADH----------------------TYFVVNGTSTANKAVINAVLT-------------------PGD 111 (557)
T ss_pred HHHHHHHHHHhCCCc----------------------eEEEECCccHHHHHHHHhhcC-------------------CCC
Confidence 788999999999882 124555666777777665543 456
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEec--CC----CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIES--DD----KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~----~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
.|++....|-|+..++.+.|...+.+.. |+ -|.++.+.+++++.+..... .++++|.+ |..|.+-++++|
T Consensus 112 ~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnp-TYdGv~~n~~~i 187 (557)
T COG1982 112 KVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNP-TYDGVCYNLRKI 187 (557)
T ss_pred EEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecC-ccceEeecHHHH
Confidence 8999999999999998888887777765 33 26799999999987654321 36677765 788999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.+.+.++++|+.+|.|++...-+++..-... --..+|.++-|.||.+.+=..+|.
T Consensus 188 ~~~~~~~~a~v~~deah~~~~~~~~~l~~~~-~~~~~~~~tqS~HK~l~alSQaS~ 242 (557)
T COG1982 188 VELLHHYGAWVLYDEAHPAHFDFSPMLPESA-LNGGADFVTQSTHKLLAALSQASM 242 (557)
T ss_pred HHHHhhcCceEEhhhcCcccccccccCcchh-hhcCceEEEechhhhhhhhhhhHH
Confidence 9999999999999999999766554322211 012479999999999876544443
No 259
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=98.83 E-value=9.4e-08 Score=94.46 Aligned_cols=133 Identities=11% Similarity=0.079 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
+-+++.+|.++-.++.. .+.+.+|++|---++.+++.+... +
T Consensus 65 ~~~ai~~w~~~r~~~~i-------------------~~e~i~~~p~VVpgi~~~I~~~T~-------------------~ 106 (388)
T COG1168 65 LYAAIAHWFKQRHQWEI-------------------KPEWIVFVPGVVPGISLAIRALTK-------------------P 106 (388)
T ss_pred HHHHHHHHHHHhcCCCC-------------------CcceEEEcCcchHhHHHHHHHhCc-------------------C
Confidence 44899999999999984 345677877766666555544322 3
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLE 315 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~ 315 (375)
+..|++....++.+.++....+.++...|. |..+.||.++||+++.+.. +.+.+.+.+.|++|.| |.|.
T Consensus 107 gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~Grvwt~eeL~ 181 (388)
T COG1168 107 GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTGRVWTKEELR 181 (388)
T ss_pred CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCCccccHHHHH
Confidence 456888889999999999999989988886 3456789999999998653 3367778899999998 8899
Q ss_pred HHHHHHHhcCCEEEEecccccC
Q psy1596 316 ELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 316 eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
+|++||++||+.++.|..|+=.
T Consensus 182 ~i~elc~kh~v~VISDEIHaDl 203 (388)
T COG1168 182 KIAELCLRHGVRVISDEIHADL 203 (388)
T ss_pred HHHHHHHHcCCEEEeecccccc
Confidence 9999999999999999987654
No 260
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.83 E-value=9e-08 Score=95.58 Aligned_cols=157 Identities=10% Similarity=-0.076 Sum_probs=106.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+++.+++.+|++. ...++|+|+++++..++.+..+ ++.
T Consensus 70 ~~Lr~~ia~~~~~~~---------------------~~I~it~G~~~~l~~~~~~~~~-------------------~gd 109 (369)
T PRK08153 70 HDLRHALAAHHGVAP---------------------ENIMVGEGIDGLLGLIVRLYVE-------------------PGD 109 (369)
T ss_pred HHHHHHHHHHhCCCH---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence 455666666667751 3578888888877665554322 345
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|++.+.+|..+...+...+.+++.||.++++ +|+++|++.+.... +.+|+.+.++++||.+-+.+++.++++.
T Consensus 110 ~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~-~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~ 183 (369)
T PRK08153 110 PVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR-EDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEA 183 (369)
T ss_pred EEEECCCcchHHHHHHHHcCCeEEEeeCCCCC-CCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 78899999999988877777899999986664 89998887765321 3366667899999999887777777664
Q ss_pred c--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 324 E--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 324 ~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
. ++||++|.+|+-...- ..... +.....--.+.-++.|.++.|
T Consensus 184 ~~~~~~lI~DE~y~~~~~~-~~~~~-~~~~~~~~i~~~SfSK~~g~~ 228 (369)
T PRK08153 184 LPETTLLVLDEAYCETAPA-GAAPP-IDTDDPNVIRMRTFSKAYGLA 228 (369)
T ss_pred CCCCcEEEEeCchhhhcCc-ccchh-hhhcCCCEEEEecchHhccCc
Confidence 3 8999999999764321 00111 111111124566889987644
No 261
>PRK08354 putative aminotransferase; Provisional
Probab=98.81 E-value=4.6e-08 Score=95.36 Aligned_cols=142 Identities=15% Similarity=0.021 Sum_probs=100.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+++++.+|.. .++|+|+++++...+.... ++.
T Consensus 43 ~~l~~~ia~~~~~~------------------------I~vt~G~~~al~~~~~~~~--------------------~gd 78 (311)
T PRK08354 43 EWLEEEFSKLFGEP------------------------IVITAGITEALYLIGILAL--------------------RDR 78 (311)
T ss_pred HHHHHHHHHHHCCC------------------------EEECCCHHHHHHHHHHhhC--------------------CCC
Confidence 45677888887633 6899999999765443211 234
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~i 320 (375)
.|++.+.++..+.++++..|.+++.++ +|++.|++++++ +.+++.+.++++||.+ +.+++|+++
T Consensus 79 ~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~ 145 (311)
T PRK08354 79 KVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDA 145 (311)
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHH
Confidence 788999999999999988888886653 688999887752 2257778899999998 457778888
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
|+++|+|+++|.+|+....- . .. .. -+ ---+.-++.|.+++|
T Consensus 146 a~~~~~~li~De~y~~f~~~-~--~~-~~-~~-~vi~~~S~SK~~~l~ 187 (311)
T PRK08354 146 VEDRNALLILDEAFIDFVKK-P--ES-PE-GE-NIIKLRTFTKSYGLP 187 (311)
T ss_pred hhhcCcEEEEeCcchhcccc-c--cc-cC-CC-cEEEEeccHhhcCCc
Confidence 99999999999999775321 1 00 00 01 123456778988754
No 262
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.81 E-value=4.5e-08 Score=98.91 Aligned_cols=164 Identities=13% Similarity=0.064 Sum_probs=102.5
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcE--EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFI--TFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~G--vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
..++|.-+++.++++||.+. ..+. +=.-+||.||+.++.+..+
T Consensus 64 id~iE~la~~ra~~lF~~~~--------------------~~w~anvqp~SGs~An~av~~aLl~--------------- 108 (399)
T PF00464_consen 64 IDEIEELAIERAKELFGAEP--------------------KEWYANVQPHSGSQANLAVYMALLK--------------- 108 (399)
T ss_dssp HHHHHHHHHHHHHHHHT-ST--------------------TTEEEE---SSHHHHHHHHHHHHT----------------
T ss_pred hhHHHHHHHHHHHHHhCCCc--------------------ccceEEeecCCchHHHHHHHHHHHh---------------
Confidence 56788899999999999982 1222 2346899999888877654
Q ss_pred hhhcCceEEEec---CCCchHHHHHHH------Hc-CCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596 237 AEINSRLVAYCS---DQAHSSVEKAGL------IG-LVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT 305 (375)
Q Consensus 237 ~~~~~~~vV~~S---~~aH~Sv~kaa~------lg-~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt 305 (375)
+++.|+.- .-.|.|.-.... .+ ..+++..++| +++.+|.+++++.+++.+ |.+|++- .
T Consensus 109 ----pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k-----PklIi~G--~ 177 (399)
T PF00464_consen 109 ----PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHK-----PKLIICG--A 177 (399)
T ss_dssp ----TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-------SEEEEE---
T ss_pred ----hcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcC-----CCEEEEC--c
Confidence 22333322 234555433221 11 2467778887 789999999999998763 6565543 3
Q ss_pred CCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596 306 TGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC 371 (375)
Q Consensus 306 T~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~ 371 (375)
+..--.-|++++.+||++.|.+|++|+||-++.+....+.. .+++||.++.+.||.|..|-+.
T Consensus 178 S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~---P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 178 SSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPN---PFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-----GCCTSSEEEEESSGGG-SSS-E
T ss_pred hhccCccCHHHHHHHHHhcCcEEEecccccccceehheecC---ccccceEEEeeccccccccCce
Confidence 44444567899999999999999999999877554433322 3567999999999999999874
No 263
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.80 E-value=2.9e-08 Score=98.41 Aligned_cols=166 Identities=13% Similarity=0.024 Sum_probs=119.2
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596 158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 237 (375)
Q Consensus 158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~ 237 (375)
-.+++|..+++...+|||.+.. -+=-.+||+||+.+..+..+
T Consensus 69 ~VD~vE~laierak~LFga~~a----------------------nVQPhSGs~AN~av~~All~---------------- 110 (413)
T COG0112 69 YVDEVEELAIERAKKLFGAEYA----------------------NVQPHSGSQANQAVYLALLQ---------------- 110 (413)
T ss_pred eHHHHHHHHHHHHHHHhCCCcc----------------------ccCCCCchHHHHHHHHHHcC----------------
Confidence 3577889999999999998731 13345789999998877644
Q ss_pred hhcCceEEEecCC---CchHHHHHHHHcC--CeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 238 EINSRLVAYCSDQ---AHSSVEKAGLIGL--VKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 238 ~~~~~~vV~~S~~---aH~Sv~kaa~lg~--~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
|++.|+.-+. .|-+--....+.| .+++..++| +++.+|.|++++.+.+.+ |.+|+ +|.+..--.
T Consensus 111 ---pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~k-----PK~ii--~G~SaY~r~ 180 (413)
T COG0112 111 ---PGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVK-----PKLII--AGGSAYSRP 180 (413)
T ss_pred ---CCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhC-----CCEEE--ECccccccc
Confidence 2334443333 3433332222333 356666777 679999999999998764 66554 466777777
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
-|++++.+||++.|.+|.+|.||-++.+..-.+. ..+++||.++.+.||+|..|-|.=+|
T Consensus 181 id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p---~P~~~AdvVTtTTHKTlrGPrGG~Il 240 (413)
T COG0112 181 IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHP---NPLPHADVVTTTTHKTLRGPRGGIIL 240 (413)
T ss_pred cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCC---CCCCccceEeCCcccCCCCCCceEEE
Confidence 8899999999999999999999977754433222 35778999999999999999875443
No 264
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.79 E-value=1.8e-07 Score=94.58 Aligned_cols=163 Identities=13% Similarity=0.045 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+.++.+.|+++++.+ ...|+++||+||..|+.+||.....+.+ . .+.
T Consensus 79 ~~~la~~L~~~~~~~-----------------------~~~f~~SGseA~e~Alk~ar~~~~~~~~---~-------~r~ 125 (397)
T TIGR03246 79 VLRLAKKLVDATFAD-----------------------KVFFCNSGAEANEAALKLARRYALDKHG---A-------DKS 125 (397)
T ss_pred HHHHHHHHHhhCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHHHHhcCC---C-------CCC
Confidence 367777888876533 4799999999999999999875322100 0 123
Q ss_pred eEEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA 310 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa 310 (375)
.+|.....-|-+..-++.+.+. .+..+|.+ |+++|+++|.+. +.+|+..-.....|.
T Consensus 126 ~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aavi~Epi~~~~G~ 194 (397)
T TIGR03246 126 EIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAAAKALISDK------TCAVIVEPIQGEGGV 194 (397)
T ss_pred EEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC-----CHHHHHHHhccC------eEEEEEecccCCCCC
Confidence 3566666778776655555432 23334432 789999988532 345666644444553
Q ss_pred ----cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 311 ----FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 311 ----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
.+.+++|.++|++||+++++|.+|.|....-.-+.....++ ..|.+++ -|.++.-+..|
T Consensus 195 ~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pig 257 (397)
T TIGR03246 195 VPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIG 257 (397)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCccee
Confidence 36699999999999999999999865422111111112244 4687764 67664333344
No 265
>PLN02397 aspartate transaminase
Probab=98.79 E-value=9.3e-08 Score=97.48 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=79.1
Q ss_pred CceEEEecCCCchHHHHHHHHcCCeEEEEec-C-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHH
Q psy1596 241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIES-D-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLE 315 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~ 315 (375)
+++.|++++.++......+.+.|.+++.||. + +++.+|++.+++.+++.. .+..+++.+.++|+||.+ +.++
T Consensus 141 pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPTG~v~s~e~l~ 217 (423)
T PLN02397 141 PGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPTGVDPTPEQWE 217 (423)
T ss_pred CCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHH
Confidence 3457999999999999999998999999987 3 357899999998886431 124577778899999998 6788
Q ss_pred HHHHHHHhcCCEEEEecccccCc
Q psy1596 316 ELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 316 eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+|+++|++||+|+++|.+|....
T Consensus 218 ~i~~~a~~~~~~vI~De~Y~~l~ 240 (423)
T PLN02397 218 QISDLIKSKNHLPFFDSAYQGFA 240 (423)
T ss_pred HHHHHHHhCCcEEEEecccCCcc
Confidence 89999999999999999998764
No 266
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.79 E-value=9.2e-08 Score=96.77 Aligned_cols=162 Identities=14% Similarity=0.032 Sum_probs=105.4
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..|++. ++...++|+|++++... +....
T Consensus 76 ~G~~~LR~aia~~~~~~~g~~~-------------------~~~~I~it~Ga~~al~~-l~~~~---------------- 119 (409)
T PRK07590 76 QGYDFLREKIAENDYQARGCDI-------------------SADEIFISDGAKCDTGN-ILDIF---------------- 119 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCcC-------------------ChhhEEECCCHHHHHHH-HHHhc----------------
Confidence 4566677888888887777763 34467888888888654 22211
Q ss_pred hhhcCceEEEecCCCchHHHHHHHHcCCe-----------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGLIGLVK-----------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT 305 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-----------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt 305 (375)
.++..|++.+.++..+...+...|.+ ++.||+++++.+.++ +++ ..+.+|+.+.++
T Consensus 120 ---~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~~~---------~~~k~i~l~nP~ 186 (409)
T PRK07590 120 ---GPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPE-LPE---------EKVDIIYLCFPN 186 (409)
T ss_pred ---CCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCccc-Ccc---------cCceEEEEeCCC
Confidence 13457889999999998888776654 888998644333332 111 124466667899
Q ss_pred CCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc-c-EE-EEcCcccCCCC
Q psy1596 306 TGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA-N-SI-AFNPSKWLMVH 368 (375)
Q Consensus 306 T~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a-D-Si-~~d~HK~l~~P 368 (375)
++||.+ +.+++|+++|++|++||++|.+|+-...- ...-..+..+... + .| .-++.|.++.|
T Consensus 187 NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~~p 254 (409)
T PRK07590 187 NPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISD-PSLPHSIYEIEGARECAIEFRSFSKTAGFT 254 (409)
T ss_pred CCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccC-CCCCcchhhCCCcccceEEEecCccccCCc
Confidence 999988 56788889999999999999999864321 1000111122111 2 33 45899988644
No 267
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.76 E-value=1.3e-07 Score=105.07 Aligned_cols=159 Identities=6% Similarity=-0.074 Sum_probs=109.7
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|+.+.-.+...++++|+|++. ....++.++|.+.-.++++.+...
T Consensus 144 QG~lqal~~~Qt~ia~LtG~~~---------------------anaSL~d~aTAaaea~~~a~~~~~------------- 189 (993)
T PLN02414 144 QGRLESLLNYQTMITDLTGLPM---------------------SNASLLDEGTAAAEAMAMCNNILK------------- 189 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCCh---------------------hhEeecCChHHHHHHHHHHHhccc-------------
Confidence 5555555788899999999983 357889999987655544432210
Q ss_pred hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
.++..|++++..|.+....++ -.|.+++.+|.++. + ...+ ..+.++... .+.+|.+.
T Consensus 190 ---g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~~------~v~~vlvq~-P~~~G~v~ 250 (993)
T PLN02414 190 ---GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSSG------DVCGVLVQY-PATDGEVL 250 (993)
T ss_pred ---CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cccC------ceEEEEEec-CCCCeEEc
Confidence 023479999999999988763 24778888887431 1 0111 133444443 46799999
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc-----ceeeC
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD-----CTAMW 375 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~-----~g~l~ 375 (375)
|+++|+++|+++|+.+.| +|...+......... + .||.++.++|||+ +|.| +|+|+
T Consensus 251 dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge----~-GADi~vgsgqKwg-~P~G~GGP~aGfla 311 (993)
T PLN02414 251 DYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGE----W-GADIVVGSAQRFG-VPMGYGGPHAAFLA 311 (993)
T ss_pred CHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhh----c-cCcEEEECCCccc-cCCCCCCCCeeEEE
Confidence 999999999999999999 888776544421111 1 4799999999997 6766 56653
No 268
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.76 E-value=4.7e-07 Score=89.76 Aligned_cols=145 Identities=12% Similarity=0.020 Sum_probs=95.7
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCc
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSL 277 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~m 277 (375)
...++|+|+++++..++.+..+ ++..|++.+.++......+.+.+.+++.+|.+ +++.+
T Consensus 83 ~~I~it~G~~~al~~~~~~~~~-------------------~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~ 143 (357)
T PRK14809 83 EQVWLANGGDGALDYLARAMLD-------------------PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQ 143 (357)
T ss_pred ceEEECCCHHHHHHHHHHHhcC-------------------CCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCc
Confidence 3578999999988766654322 34578888888877777777778888888874 35678
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc--CCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYAN 355 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD 355 (375)
|.+++++.+. . +.+|+.+.++++||.+-+.+++.++++.. +++|++|.+|+.... .+.....+.. .-.
T Consensus 144 ~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~-~~~~~~~~~~--~~~ 213 (357)
T PRK14809 144 TADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAE-RPSAVALVEE--RDD 213 (357)
T ss_pred CHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccC-CchhHHHHhh--CCC
Confidence 8888777642 1 23677778999999997777776666543 789999999986532 1111111111 112
Q ss_pred E-EEEcCcccCCCC-Cccee
Q psy1596 356 S-IAFNPSKWLMVH-FDCTA 373 (375)
Q Consensus 356 S-i~~d~HK~l~~P-~~~g~ 373 (375)
. +.-++.|.++.| +-+|.
T Consensus 214 vi~~~SfSK~~~~~GlRiG~ 233 (357)
T PRK14809 214 VAVLRTFSKAYGLAGLRLGY 233 (357)
T ss_pred EEEEecchhHhcCcchhhee
Confidence 2 345888988644 33443
No 269
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.75 E-value=3.5e-07 Score=91.25 Aligned_cols=158 Identities=10% Similarity=-0.034 Sum_probs=105.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR- 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~- 242 (375)
..+++.+++.+|.+. ...++|+|+++++..++.+... ++
T Consensus 62 ~~lr~~ia~~~~~~~---------------------~~I~~t~G~~~~l~~~~~~~~~-------------------~g~ 101 (364)
T PRK04781 62 PGLRSALAALYGCAP---------------------EQLLIGRGSDEAIDLLVRALCV-------------------PGR 101 (364)
T ss_pred HHHHHHHHHHhCcCh---------------------HHEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence 566777788888762 3578999999998776654321 22
Q ss_pred eEEEecCCCchHHHHHHHHcCCeEEEEecC--C-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESD--D-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
..|++++..+..+...++..|.+++.||.+ + .+.+|++++++.+... .+.+|+++.++++||.+-+.+++.+
T Consensus 102 ~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~ 176 (364)
T PRK04781 102 DAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIER 176 (364)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHH
Confidence 467888888766666667788899999974 2 3468999886655321 1346677789999999988887777
Q ss_pred HHHh--cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 320 ICEK--EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 320 ia~~--~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+++. +++|+++|.+|+-... .+.........++ =.+.-++.|.++.|
T Consensus 177 l~~~~~~~~~iI~Deay~~f~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~ 225 (364)
T PRK04781 177 ALQALQGKALVVVDEAYGEFSD-VPSAVGLLARYDN-LAVLRTLSKAHALA 225 (364)
T ss_pred HHHhCCCCcEEEEeCcchhhcC-CcchHHHHhhCCC-EEEEecChhhcccc
Confidence 7764 4899999999986532 1111111111111 14567888977644
No 270
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.73 E-value=1.9e-07 Score=93.64 Aligned_cols=170 Identities=16% Similarity=0.088 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
.+.++.+.|+++.+.+ ..+|++|||+||..|+.++|.....+ + .. .+
T Consensus 74 ~~~~la~~l~~~~~~~-----------------------~v~~~~sGseA~~~al~~ar~~~~~~-G--~~-------~r 120 (389)
T PRK01278 74 EQERLAERLVENSFAD-----------------------KVFFTNSGAEAVECAIKTARRYHYGK-G--HP-------ER 120 (389)
T ss_pred HHHHHHHHHHhhCCCC-----------------------EEEEcCCcHHHHHHHHHHHHHHHHhc-C--CC-------CC
Confidence 3467777888775432 47999999999999999998753221 0 00 01
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEE---EecCCCCC----cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc----
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRY---IESDDKLS----LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA---- 310 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~---Vp~d~~g~----md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa---- 310 (375)
+.+|.....-|.+..-+..+++..... .|..++.. .|+++|+++|+++ +.+|+.+-..+.+|.
T Consensus 121 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~ 194 (389)
T PRK01278 121 YRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAP 194 (389)
T ss_pred CEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCC
Confidence 234555555565555554444322111 12112222 5899999998642 345666644445552
Q ss_pred cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 311 FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 311 vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
-+.+++|.++|++||+++++|.+|.+......-+.....++ ..|.++ +.|.+..-+..|.
T Consensus 195 ~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~l~~G~~ig~ 254 (389)
T PRK01278 195 DEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGV-TPDIMA--VAKGIGGGFPLGA 254 (389)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCC-CCCEEE--EehhccCCcceEE
Confidence 26899999999999999999999986532111001111233 246554 4687753333443
No 271
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.73 E-value=1.9e-07 Score=91.82 Aligned_cols=151 Identities=11% Similarity=0.004 Sum_probs=103.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++.+|.+. ...++|+|+++++..++.. .. ++.
T Consensus 43 ~~lr~~ia~~~~~~~---------------------~~I~it~Gs~~~l~~~~~~-~~-------------------~~~ 81 (332)
T PRK06425 43 TDIEDQIKIYTQGLK---------------------IKVLIGPGLTHFIYRLLSY-IN-------------------VGN 81 (332)
T ss_pred HHHHHHHHHHhCCCc---------------------ceEEECCCHHHHHHHHHHH-hC-------------------CCc
Confidence 778888999999872 3478899999987766532 11 222
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~i 320 (375)
++ +.+.++..+...++..|.+++.||.++ ..+|.+.+++ . .+.+|+.+.++++||.+ +.+++|+++
T Consensus 82 vv-~~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~ 150 (332)
T PRK06425 82 II-IVEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEI 150 (332)
T ss_pred EE-EeCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHH
Confidence 44 448899999999999999999999875 4456655542 1 13467777899999997 557788888
Q ss_pred HHhcCCEEEEecccccCcccc-hhhhhhhcCCCcccE-EEEcCcccCCCC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGVEYANS-IAFNPSKWLMVH 368 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gie~aDS-i~~d~HK~l~~P 368 (375)
|+++++||++|.+|+-...-. +........- -.. +.-++.|.++.|
T Consensus 151 a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~--~~vi~~~SfSK~~~l~ 198 (332)
T PRK06425 151 CRKKGALLFIDEAFIDFVPNRAEEDVLLNRSY--GNVIIGRSLTKILGIP 198 (332)
T ss_pred HHHcCCEEEEecchhccccccchhHHHHhccC--CCEEEEeecHHhcCCc
Confidence 999999999999998653211 1111111111 123 445889987744
No 272
>PRK07049 methionine gamma-lyase; Validated
Probab=98.73 E-value=6.9e-07 Score=91.46 Aligned_cols=150 Identities=13% Similarity=-0.001 Sum_probs=109.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.|+++.|.+ ..++++||+.|+..++.+..+ ++.
T Consensus 86 ~~Le~~lA~leg~~-----------------------~~iv~~sG~~Ai~~~l~al~~-------------------~Gd 123 (427)
T PRK07049 86 EIVEDRLAVYEGAE-----------------------SAALFSSGMSAIATTLLAFVR-------------------PGD 123 (427)
T ss_pred HHHHHHHHHHhCCC-----------------------cEEEEccHHHHHHHHHHHHhC-------------------CCC
Confidence 67778888887744 378999999997777655432 345
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++++..+......+ ...|.+++.++. ..|.++|+++|++..++. .+.+|++..++|++|.+-++++|.+
T Consensus 124 ~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~----~~d~~~l~~~l~~~~~~~-~tklv~lesP~NPtg~v~d~~~l~~ 198 (427)
T PRK07049 124 VILHSQPLYGGTETLLAKTFRNFGVGAVGFAD----GLSEAAIGAAAEAAAAKG-RVSLILIETPANPTNSLVDVAAVRR 198 (427)
T ss_pred EEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC----CCCHHHHHHHHHhhccCC-CceEEEEECCCCCCCcccCHHHHHH
Confidence 7888888887776653 234666666652 257889998887543222 2557888899999999999999999
Q ss_pred HHHh------cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 320 ICEK------EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 320 ia~~------~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
++++ ++++++||.+|.......| +.. .+|-+.-++.|.++.
T Consensus 199 la~~~~~~~~~~~~vvvDety~~~~~~~p----l~~---g~divv~S~SK~~gG 245 (427)
T PRK07049 199 VADAIEARQGHRPIIACDNTLLGPVFQKP----LEH---GADLSVYSLTKYVGG 245 (427)
T ss_pred HHHHhhhcccCCCEEEEECCccccccCCc----ccc---CCCEEEEcCceeecC
Confidence 9987 8999999999877543222 111 369999999999884
No 273
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.73 E-value=3.5e-07 Score=91.20 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
.+++.++.+++++..+.+ ..+|+++|++||..|+..+|...
T Consensus 70 ~~~~~~la~~l~~~~~~~-----------------------~~~~~~sG~~a~~~A~~~a~~~~---------------- 110 (377)
T PRK02936 70 NSLQEEVASLLAENSAGD-----------------------LVFFCNSGAEANEAALKLARKHT---------------- 110 (377)
T ss_pred CHHHHHHHHHHHhcCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHhc----------------
Confidence 445577777777765432 47999999999999999887531
Q ss_pred cCceEEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596 240 NSRLVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG 307 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~ 307 (375)
.++.++.....-|-+..-++.+.+. .+..+|.+ |+++|++.+.+. +.+|+.....+.
T Consensus 111 g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~------~~~ii~e~i~~~ 179 (377)
T PRK02936 111 GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEE------VAAVMLEVVQGE 179 (377)
T ss_pred CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC-----CHHHHHHhccCC------eEEEEEecccCC
Confidence 0123566666778776666544332 11223322 789999988543 335666555555
Q ss_pred cccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 308 ACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 308 tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.|.+ +.+++|.++|++||+++++|.+|.+.......+.....++ ..|.++ +.|.+..-+..|.
T Consensus 180 ~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~ 246 (377)
T PRK02936 180 GGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGA 246 (377)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCC-CCcEEE--EcccccCCCccEE
Confidence 5554 4599999999999999999999976422110011011233 246554 6898774334443
No 274
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=98.73 E-value=2.4e-07 Score=92.75 Aligned_cols=172 Identities=12% Similarity=0.042 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
...+.++.++|+++.|.+ ..+||+||++|+..|+.+++..... .. .
T Consensus 80 ~~~~~~la~~l~~~~~~~-----------------------~v~~~~gg~eA~~~al~~a~~~~~~-~~----------~ 125 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD-----------------------KVFFCNSGAEANEAAIKLARKYGHK-KG----------I 125 (396)
T ss_pred CHHHHHHHHHHHhhcCCC-----------------------EEEECCCcHHHHHHHHHHHHHHhcc-cC----------C
Confidence 445578889999886654 4799999999999999998864211 00 0
Q ss_pred cCceEEEecCCCchHHHHHHHHcCCeEE---EEecCCCC----CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc--
Q psy1596 240 NSRLVAYCSDQAHSSVEKAGLIGLVKMR---YIESDDKL----SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-- 310 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~---~Vp~d~~g----~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-- 310 (375)
.+..++.....-|-...-+..+.+.... ..+..++. .-|+++|++++.+. +.+|+.+...+++|.
T Consensus 126 ~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~ 199 (396)
T PRK02627 126 EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNP 199 (396)
T ss_pred CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCcc
Confidence 0122444445556444444444432211 11211111 12899999988432 345666555556662
Q ss_pred --cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 311 --FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 311 --vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
-+.+++|.++|++||++|++|.+|++.............++ ..|.+++ -|.++..+..|.+
T Consensus 200 ~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~~~~G~rig~~ 262 (396)
T PRK02627 200 ADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGI-EPDIMTL--AKGLGGGVPIGAV 262 (396)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCC-CCCEEEE--cchhhCCcccEEE
Confidence 25699999999999999999999986422110000001233 3466654 5887754555543
No 275
>KOG0259|consensus
Probab=98.72 E-value=1.7e-07 Score=92.43 Aligned_cols=117 Identities=9% Similarity=0.164 Sum_probs=95.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCC
Q psy1596 198 PPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKL 275 (375)
Q Consensus 198 ~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g 275 (375)
...+.++|+|.++|+-+++.+.-+ ++.-|+++.....-..--+...+.++|.... +.++
T Consensus 125 ~a~DV~ltsGC~qAIe~~i~~LA~-------------------p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~w 185 (447)
T KOG0259|consen 125 TADDVVLTSGCSQAIELAISSLAN-------------------PGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDW 185 (447)
T ss_pred CcCceEEeccchHHHHHHHHHhcC-------------------CCCceecCCCCCchHHHhhhhcCceeEeecccCcccc
Confidence 446789999999999888765422 3446889988866555556777888887764 6899
Q ss_pred CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596 276 SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSF 339 (375)
Q Consensus 276 ~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~ 339 (375)
++|++.+|.++++.+ ++++++-+++++|.| +.|++|+++|+|+++.++.|..|+-...
T Consensus 186 eIDL~~veal~DENT------~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vf 246 (447)
T KOG0259|consen 186 EIDLDGVEALADENT------VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVF 246 (447)
T ss_pred eechHHHHHhhccCe------eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeec
Confidence 999999999998874 478888899999988 8999999999999999999999987543
No 276
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.71 E-value=3.5e-07 Score=92.60 Aligned_cols=154 Identities=12% Similarity=0.040 Sum_probs=97.7
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEE---EEecCCCC--
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMR---YIESDDKL-- 275 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~---~Vp~d~~g-- 275 (375)
..+|+++||+||..|+..+|.... +.+ + .++.+|.....-|-+..-++.+.+.... ..|.....
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~-~~~---~-------~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~ 163 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGR-KHK---N-------GAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPK 163 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhh-ccC---C-------CCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCcee
Confidence 479999999999999999986421 000 0 1233566677788888777766543211 11111111
Q ss_pred --CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc
Q psy1596 276 --SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA 349 (375)
Q Consensus 276 --~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~ 349 (375)
.-|+++|++++++. ..+|++.-...+.|.+-+ +++|.++|++||+++++|.++.|....-.-+.....
T Consensus 164 ~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~ 237 (395)
T PRK03715 164 AELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELS 237 (395)
T ss_pred eCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhc
Confidence 24788999888532 346666655566677755 999999999999999999999874332211111123
Q ss_pred CCCcccEEEEcCcccCCCCCcceee
Q psy1596 350 GVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 350 gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
++ ..|.+++. |.++..++.|++
T Consensus 238 gv-~PDi~t~g--K~lg~G~p~~av 259 (395)
T PRK03715 238 GI-EPDIMTLG--KGIGGGVPLAAL 259 (395)
T ss_pred CC-CCceeeeh--hhhhCCcceEEE
Confidence 55 47887774 877764555543
No 277
>KOG2040|consensus
Probab=98.71 E-value=2.1e-07 Score=96.71 Aligned_cols=172 Identities=15% Similarity=0.116 Sum_probs=132.7
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELE 235 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~ 235 (375)
.|.+++-.++..||+++.|++. ..|+ .+|.++-..+|++.|.+...+ ++
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D~-----------------------~s~QPNsGA~GEYaGL~~IRaY~~~k-ge------ 627 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGFDS-----------------------FSLQPNSGAQGEYAGLRVIRAYLESK-GE------ 627 (1001)
T ss_pred hhHHHHHHHHHHHhheeecccc-----------------------eeecCCCCcccchhhHHHHHHHHHhc-cC------
Confidence 5677777899999999999982 2333 245566777888877764321 11
Q ss_pred hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccH
Q psy1596 236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNL 314 (375)
Q Consensus 236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl 314 (375)
..+-+.+++-.+|-.....+.+.|.+++.|.++.+|.+|..+|++..++...+ -.++.+|.++|. |.+ ..|
T Consensus 628 ----~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~---Laa~MvTYPST~-GvfE~~i 699 (1001)
T KOG2040|consen 628 ----GHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDN---LAALMVTYPSTH-GVFEEGI 699 (1001)
T ss_pred ----CcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhh---hheeEEeccccc-ccccccH
Confidence 23558899999999999999999999999999999999999999998876543 457889999874 555 679
Q ss_pred HHHHHHHHhcCCEEEEecccccC-cccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 315 EELGPICEKEGLWLHVDAAYAGS-SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 315 ~eI~~ia~~~~iwlHVDaA~gg~-~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
++++++.++||--+..|||---. .-+|. .|--.+|..-++.||++.+|.|.|
T Consensus 700 ~d~cd~iHehGGQVYlDGANMNAqVGlc~------pGd~GaDV~HLNLHKTFcIPHGGG 752 (1001)
T KOG2040|consen 700 DDICDIIHEHGGQVYLDGANMNAQVGLCR------PGDIGADVCHLNLHKTFCIPHGGG 752 (1001)
T ss_pred HHHHHHHHhcCCEEEecCCCccceecccC------CccccccceeecccceeeecCCCC
Confidence 99999999999999999985322 11221 122257999999999999999876
No 278
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=98.71 E-value=5.7e-07 Score=89.33 Aligned_cols=140 Identities=14% Similarity=-0.045 Sum_probs=94.4
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCC---
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLS--- 276 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~--- 276 (375)
...++|+|+++++..++.+. . ++..|++.+.++..+...+...|.+++.||.++++.
T Consensus 75 ~~I~it~G~~~~i~~~~~~l-~-------------------~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 134 (360)
T PRK07392 75 EWILPGNGAAELLTWAGREL-A-------------------QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPG 134 (360)
T ss_pred hhEEECCCHHHHHHHHHHHh-C-------------------CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcc
Confidence 35788999998877665432 1 123688899999999999988889999999875443
Q ss_pred --cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCC
Q psy1596 277 --LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVE 352 (375)
Q Consensus 277 --md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie 352 (375)
.+++.+++... .+.+++.+.++++||.+-+.++|.++++++++ +++|.+|.....-. +.....+..-+
T Consensus 135 ~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~ 206 (360)
T PRK07392 135 LTLRLQTLPPQLT-------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYP 206 (360)
T ss_pred cccCHHHHHHhcc-------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCC
Confidence 34555443321 24477778899999999999999999999985 67799998754210 01111111111
Q ss_pred cccEEEEcCcccCCCC
Q psy1596 353 YANSIAFNPSKWLMVH 368 (375)
Q Consensus 353 ~aDSi~~d~HK~l~~P 368 (375)
.+ .+.-++.|.++.|
T Consensus 207 ~v-i~i~S~SK~~~l~ 221 (360)
T PRK07392 207 NL-IILRSLTKFYSLP 221 (360)
T ss_pred CE-EEEEechhhhcCC
Confidence 11 3455889988744
No 279
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.69 E-value=1e-07 Score=96.32 Aligned_cols=139 Identities=14% Similarity=0.107 Sum_probs=94.6
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|...+++.+.+|+.+..|.+. ++...++|+|+++++..++.+..... ..
T Consensus 74 ~G~~~LR~aia~~~~~~~g~~v-------------------~~~~I~it~Ga~~al~~~~~~l~~~~-----~~------ 123 (416)
T PRK09440 74 QGKDELIEALAALLNERYGWNI-------------------SPQNIALTNGSQSAFFYLFNLFAGRR-----AD------ 123 (416)
T ss_pred CCCHHHHHHHHHHHHHHhCCCC-------------------ChhhEEEccChHHHHHHHHHHHhccc-----cC------
Confidence 3556777888999988888763 33468899999998777665443210 00
Q ss_pred hhhcCceEEEe-cCCCchHHHHHHHHcC----CeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596 237 AEINSRLVAYC-SDQAHSSVEKAGLIGL----VKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA 308 (375)
Q Consensus 237 ~~~~~~~vV~~-S~~aH~Sv~kaa~lg~----~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t 308 (375)
.++..|++ .+.++..+...+...+ ..++.+++++ ++.+|+++|+ +.. .+.+++.+.++++|
T Consensus 124 ---~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~P~NPT 192 (416)
T PRK09440 124 ---GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSRPTNPT 192 (416)
T ss_pred ---CCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEecCCCCC
Confidence 02345667 5777777766554222 2223334433 3579999997 221 24577788899999
Q ss_pred ccc---ccHHHHHHHHHhcCCEEEEeccccc
Q psy1596 309 CAF---DNLEELGPICEKEGLWLHVDAAYAG 336 (375)
Q Consensus 309 Gav---Dpl~eI~~ia~~~~iwlHVDaA~gg 336 (375)
|.+ +.+++|+++|+++++|+++|.+|+-
T Consensus 193 G~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~ 223 (416)
T PRK09440 193 GNVLTDEELEKLDALARQHNIPLLIDNAYGP 223 (416)
T ss_pred CccCCHHHHHHHHHHHHHcCCcEEEeCCccc
Confidence 998 5588899999999999999999974
No 280
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.67 E-value=9.3e-07 Score=89.34 Aligned_cols=130 Identities=12% Similarity=0.118 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+.++.+.|+++.+.+ ...|+++||+||..|+..+|.......+ ..++
T Consensus 84 ~~~l~~~l~~~~~~~-----------------------~~~~~~sGseA~e~a~klar~~~~~~~~----------~~~~ 130 (403)
T PRK05093 84 ALRLAKKLIDATFAE-----------------------RVFFANSGAEANEAAFKLARRYACDRHG----------PEKT 130 (403)
T ss_pred HHHHHHHHHhhCCCC-----------------------EEEEeCchHHHHHHHHHHHHHHHhhcCC----------CCCC
Confidence 357778888876443 4689999999999999999875421100 0123
Q ss_pred eEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA 310 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa 310 (375)
.+|.....-|-+..-+..+++ .++..+|.+ |+++|++.+.+. +.+|+.. +...+|.
T Consensus 131 ~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aaiiie-p~~~~gg 198 (403)
T PRK05093 131 EIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVIDDH------TCAVVVE-PIQGEGG 198 (403)
T ss_pred eEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhcCC------eEEEEEe-cccCCCC
Confidence 466677777877665544322 123334332 789999888532 3456655 4455543
Q ss_pred -c----ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596 311 -F----DNLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 311 -v----Dpl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
+ +.+++|.++|++||+++++|.+|.+.
T Consensus 199 ~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~ 230 (403)
T PRK05093 199 VIPATPEFLQGLRELCDQHNALLIFDEVQTGM 230 (403)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 3 45999999999999999999999864
No 281
>PLN02624 ornithine-delta-aminotransferase
Probab=98.66 E-value=1.4e-06 Score=90.33 Aligned_cols=168 Identities=14% Similarity=0.055 Sum_probs=103.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|++++|++ ..+|+++||+||-.|+..||.....+.+. +. .+..
T Consensus 120 ~~la~~L~~~~~~~-----------------------~~~f~~SGseA~e~AlklAr~~~~~~~g~--~~------~~~~ 168 (474)
T PLN02624 120 PEFAEYLTSMFGYD-----------------------MVLPMNTGAEGVETAIKLARKWGYEKKGI--PK------NEAI 168 (474)
T ss_pred HHHHHHHHhhcCCC-----------------------eEEEeCChHHHHHHHHHHHHHHHHhhcCC--CC------CCcE
Confidence 66778888887654 36899999999999999998752211000 00 0112
Q ss_pred EEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
+|.....-|-...-+..+.+. .+..+|.+ |++.|+++++.. +....+|++.-..+++|.+
T Consensus 169 ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v 240 (474)
T PLN02624 169 IVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKIFEED---GDRIAAFLFEPIQGEAGVV 240 (474)
T ss_pred EEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHHHHhC---CCCEEEEEECCccCCCCCc
Confidence 333433344333333322211 12334332 789999998642 2235577777777788987
Q ss_pred cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596 312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA 373 (375)
Q Consensus 312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~ 373 (375)
-| |++|.++|++||+++++|++|.|.......+.....++ ..|.++++ |.++.. +.+|.
T Consensus 241 ~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~piga 304 (474)
T PLN02624 241 IPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSA 304 (474)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCccee
Confidence 65 99999999999999999999986432111111112344 46888875 877655 34444
No 282
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.65 E-value=8.7e-07 Score=89.61 Aligned_cols=145 Identities=14% Similarity=0.111 Sum_probs=108.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.|+++-|-. ..+++++|..|+..++.+... ++.
T Consensus 58 ~~le~~la~Le~g~-----------------------~a~~~~SGmaAi~~~l~~ll~-------------------~Gd 95 (386)
T PF01053_consen 58 RALEQRLAALEGGE-----------------------DALLFSSGMAAISAALLALLK-------------------PGD 95 (386)
T ss_dssp HHHHHHHHHHHT-S-----------------------EEEEESSHHHHHHHHHHHHS--------------------TTB
T ss_pred HHHHHHHHHhhccc-----------------------ceeeccchHHHHHHHHHhhcc-------------------cCC
Confidence 67778888886544 468899999998887776532 245
Q ss_pred EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|+++...+....+-+. -.++++..++. -|+++|++++++. +.+|.+..+++++..+-||++|++
T Consensus 96 ~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-----~d~~~l~~~l~~~------t~~v~~EspsNP~l~v~Dl~~i~~ 164 (386)
T PF01053_consen 96 HIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-----TDLEALEAALRPN------TKLVFLESPSNPTLEVPDLEAIAK 164 (386)
T ss_dssp EEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-----TSHHHHHHHHCTT------EEEEEEESSBTTTTB---HHHHHH
T ss_pred ceEecCCccCcchhhhhhhhcccCcEEEEeCc-----hhHHHHHhhcccc------ceEEEEEcCCCcccccccHHHHHH
Confidence 68888887777666553 25778887765 3899999999874 448999999999999999999999
Q ss_pred HHHhcC-CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 320 ICEKEG-LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 320 ia~~~~-iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+|+++| +.+.||..++.+...-| +-.| ||-+.-|..|++...
T Consensus 165 ~a~~~g~~~~vVDnT~atp~~~~p----L~~G---aDivv~S~TKyl~Gh 207 (386)
T PF01053_consen 165 LAKEHGDILVVVDNTFATPYNQNP----LELG---ADIVVHSATKYLSGH 207 (386)
T ss_dssp HHHHTTT-EEEEECTTTHTTTC-G----GGGT----SEEEEETTTTTTTS
T ss_pred HHHHhCCceEEeeccccceeeecc----CcCC---ceEEEeeccccccCC
Confidence 999998 99999999999855433 2224 799999999998644
No 283
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.59 E-value=8.9e-07 Score=88.49 Aligned_cols=147 Identities=12% Similarity=0.031 Sum_probs=91.2
Q ss_pred EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEE------EEecCCCC
Q psy1596 202 ITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMR------YIESDDKL 275 (375)
Q Consensus 202 GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~------~Vp~d~~g 275 (375)
.+|++|||+||..|+..+|... .++.+|.....-|-+...++.+.+.+.. .++.....
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~----------------~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKAT----------------GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA 150 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhc----------------CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe
Confidence 6899999999999999998641 0123555667779887777655432111 01100001
Q ss_pred -CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc----cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcC
Q psy1596 276 -SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD----NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAG 350 (375)
Q Consensus 276 -~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD----pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~g 350 (375)
..|+++|++++.+. ..+|+.....+++|.+- .+++|.++|+++|+++++|++|.+......-+.....+
T Consensus 151 ~~~dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~ 224 (375)
T PRK04260 151 IFNDLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYG 224 (375)
T ss_pred CCCCHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhC
Confidence 24889999887532 34666666666777763 49999999999999999999997643211111111224
Q ss_pred CCcccEEEEcCcccCCCCCccee
Q psy1596 351 VEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 351 ie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+ .-|.+ ++.|.+..-+..|.
T Consensus 225 ~-~pdi~--t~sK~l~~G~~ig~ 244 (375)
T PRK04260 225 I-EPDIF--TLAKGLANGVPVGA 244 (375)
T ss_pred C-CCCEE--EecccccCCcceEE
Confidence 3 34644 57897763233443
No 284
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.57 E-value=1.8e-06 Score=87.52 Aligned_cols=162 Identities=15% Similarity=0.092 Sum_probs=99.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|+++++.+ ..+|+++||+||-.|+.+||.....+.. . .+..
T Consensus 84 ~~la~~l~~~~~~~-----------------------~v~~~~sGseA~e~Alk~ar~~~~~~~~---~-------~r~~ 130 (406)
T PRK12381 84 LRLAKKLIDATFAD-----------------------RVFFCNSGAEANEAALKLARKYAHDRYG---S-------HKSG 130 (406)
T ss_pred HHHHHHHHhhCCCC-----------------------eEEEcCCcHHHHHHHHHHHHHHHhhcCC---C-------CCCe
Confidence 56777888876433 4799999999999999999875321100 0 1223
Q ss_pred EEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA- 310 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa- 310 (375)
++.....-|-+..-++.+++.. +..+|. -|+++|++.+++. +.+|+.. +...+|.
T Consensus 131 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~------~aaviiE-Pv~~~gg~ 198 (406)
T PRK12381 131 IVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALIDDQ------TCAVIVE-PIQGEGGV 198 (406)
T ss_pred EEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhccCC------eeEEEEe-CCcCCCCC
Confidence 5555666676665454554421 222332 3789999888532 3355554 5555553
Q ss_pred ----cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 311 ----FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 311 ----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.+.+++|.++|++||+++++|.+|.+....-.-+.....++ ..|.++ .-|.++.-+..|.
T Consensus 199 ~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~t--~sK~l~gG~~ig~ 262 (406)
T PRK12381 199 IPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDVLT--TAKALGGGFPIGA 262 (406)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCC-CCCEEE--ehhhhhCCCceEE
Confidence 47899999999999999999999966432111111112244 357654 4687754344443
No 285
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.57 E-value=1.6e-06 Score=88.33 Aligned_cols=156 Identities=11% Similarity=0.056 Sum_probs=95.7
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|+.+.--+...+++++.|+|.. ..-+..++|.+-=.++++.|...
T Consensus 106 QG~Lq~lfe~Qs~i~eLTGmdva---------------------NaSlyd~atA~aEa~~ma~r~~~------------- 151 (429)
T PF02347_consen 106 QGRLQALFEYQSMICELTGMDVA---------------------NASLYDGATAAAEAMLMAVRATK------------- 151 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSEE----------------------SEBSSCCHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHHHHhhCCCcc---------------------CCCCCChhHHHHHHHHHHHHhcc-------------
Confidence 56666667889999999999830 11233444433222222233211
Q ss_pred hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
.++-.|++++..|......++ ..+.+++.+|.++++..| .+ ....|+++.++ ..|.++
T Consensus 152 ---~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~~------~~a~v~vq~Pn-~~G~~e 213 (429)
T PF02347_consen 152 ---RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------DD------DTAAVMVQNPN-TFGVFE 213 (429)
T ss_dssp ---T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------ST------TEEEEEEESS--TTSB--
T ss_pred ---cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------cc------CeEEEEeecCC-CCceEe
Confidence 012379999999998887654 257789999998888887 22 25689999885 579998
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCc--ccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSS--FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~--~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
++++|+++++++|..+++ +|--.+. +-.|. . - .||-+ +.-||.+++|.+.|.
T Consensus 214 d~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pg--e--~---GADI~-vg~~Q~fg~p~~~GG 267 (429)
T PF02347_consen 214 DIKEIADIAHAAGALVIV-GADPNALGGLKSPG--E--Y---GADIV-VGEHQTFGIPMGFGG 267 (429)
T ss_dssp THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GG--G--G---T-SEE-EECCTTTT---CCC-
T ss_pred eHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChh--h--c---CccEE-eeCCCCCcccCCCCC
Confidence 899999999999999887 7654332 22232 1 1 37988 777999999998873
No 286
>KOG1359|consensus
Probab=98.54 E-value=3.4e-07 Score=87.81 Aligned_cols=162 Identities=13% Similarity=-0.003 Sum_probs=119.1
Q ss_pred CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596 152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH 231 (375)
Q Consensus 152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~ 231 (375)
...+.+|++.+++.+...++++-|-+ +-++.+++-.||.-++.+..+
T Consensus 103 svrfIcGtq~iHk~LE~kiAqfh~rE-----------------------D~ilypscfdANag~feail~---------- 149 (417)
T KOG1359|consen 103 SVRFICGTQDIHKLLESKIAQFHGRE-----------------------DTILYPSCFDANAGAFEAILT---------- 149 (417)
T ss_pred ceeEEecchHHHHHHHHHHHHHhCCC-----------------------ceEEeccccccchHHHHHhcC----------
Confidence 45678999999999999999987665 247777777787666655432
Q ss_pred CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCccc
Q psy1596 232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACA 310 (375)
Q Consensus 232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGa 310 (375)
+...|+..+..|.|+..+.+|.. ..+.+|+-.||..+.+.-+. -+-+|+|-| .++.|.
T Consensus 150 ---------pedAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~---r~klv~TDg~FSMDGd 208 (417)
T KOG1359|consen 150 ---------PEDAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKM---RLKLVVTDGVFSMDGD 208 (417)
T ss_pred ---------hhhhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhh---eEEEEEecceeccCCC
Confidence 34568888999999999988765 45667888898877654433 224555554 557799
Q ss_pred cccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 311 FDNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 311 vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
+.|+++|+.++++||..+.+|.+|+-+.+=. ......+.-..++|-+.-..-|.++.
T Consensus 209 iaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg 267 (417)
T KOG1359|consen 209 IAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG 267 (417)
T ss_pred cccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC
Confidence 9999999999999999999999999874311 01122222234689888888888774
No 287
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.54 E-value=2e-06 Score=86.83 Aligned_cols=109 Identities=16% Similarity=0.083 Sum_probs=78.2
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC-----------eEEE
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV-----------KMRY 268 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~-----------~v~~ 268 (375)
...++|+|++++... +..... ++..|++...++..+...++..|. +++.
T Consensus 96 d~I~it~Ga~~al~~-l~~l~~-------------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 155 (402)
T TIGR03542 96 EEIFISDGAKCDVFR-LQSLFG-------------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITY 155 (402)
T ss_pred HHEEECCCcHHHHHH-HHHhcC-------------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEE
Confidence 457888888888765 222111 234688899999988888887777 8888
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
||.++++.++++. ++ . ..+.+|+.+.++++||.+ +.+++|+++|++++++|++|.+|+-.
T Consensus 156 v~~~~~~~~~~~~-~~---~-----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~ 218 (402)
T TIGR03542 156 LPCTKENNFIPDL-PE---E-----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAF 218 (402)
T ss_pred eecchhhCCCCCc-cc---c-----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhh
Confidence 9886433333331 11 0 113467777899999998 45889999999999999999999864
No 288
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=98.52 E-value=4.6e-06 Score=83.52 Aligned_cols=130 Identities=15% Similarity=0.074 Sum_probs=100.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.+++.+|.. +....++..|+++.+-..+.+.+. ++.
T Consensus 60 ~~l~~a~a~~~~~~--------------------~~~~V~~gnGsde~i~~l~~~~~~-------------------~gd 100 (356)
T COG0079 60 RELRAALAEYYGVV--------------------DPENVLVGNGSDELIELLVRAFVE-------------------PGD 100 (356)
T ss_pred HHHHHHHHHHhCCC--------------------CcceEEEcCChHHHHHHHHHHhhc-------------------CCC
Confidence 67788888888832 123345566666766555544432 234
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|+++..+.......++..|.+++.||.++ +++|++++.+++.++ +-+|+.+.++++||..-+.++|.++++.
T Consensus 101 ~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~------~~lv~i~nPNNPTG~~~~~~~l~~l~~~ 173 (356)
T COG0079 101 TVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDK------TKLVFLCNPNNPTGTLLPREELRALLEA 173 (356)
T ss_pred EEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 788899998888888999999999999988 999999999999873 3388888999999999777777777765
Q ss_pred c--CCEEEEecccccCcc
Q psy1596 324 E--GLWLHVDAAYAGSSF 339 (375)
Q Consensus 324 ~--~iwlHVDaA~gg~~~ 339 (375)
. +.++.||.||.=+.-
T Consensus 174 ~~~~~~vVvDEAY~eF~~ 191 (356)
T COG0079 174 LPEGGLVVIDEAYIEFSP 191 (356)
T ss_pred CCCCcEEEEeCchhhcCC
Confidence 4 889999999977543
No 289
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.51 E-value=2.6e-06 Score=84.06 Aligned_cols=131 Identities=15% Similarity=0.017 Sum_probs=94.3
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG 279 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~ 279 (375)
...++|+|+++++..++.+. + .|++.+.++..+..++.+.|.+++.+|.++++.++.
T Consensus 77 ~~i~it~Ga~~~i~~~~~~~-d----------------------~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 133 (335)
T PRK14808 77 NNVSVGNGADEIIYVMMLMF-D----------------------RSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPE 133 (335)
T ss_pred ceEEEcCCHHHHHHHHHHHh-C----------------------cEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCCh
Confidence 46889999999988776542 1 367788999999999999999999999988887664
Q ss_pred HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEE
Q psy1596 280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF 359 (375)
Q Consensus 280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~ 359 (375)
.. +. ...+|+.+.++|+||.+-+.+++.+++ ++++||++|.+|.-..- ..+...+...++ =.+.-
T Consensus 134 ~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~--~~~~~~~~~~~~-vi~~~ 198 (335)
T PRK14808 134 VN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHG--ESYVDLLKKYEN-LAVIR 198 (335)
T ss_pred hH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcC--CchHHHHHhCCC-EEEEE
Confidence 32 11 123777888999999999999999998 58999999999976421 111111222211 13556
Q ss_pred cCcccCCCC
Q psy1596 360 NPSKWLMVH 368 (375)
Q Consensus 360 d~HK~l~~P 368 (375)
++.|.++.|
T Consensus 199 S~SK~~~l~ 207 (335)
T PRK14808 199 TFSKAFSLA 207 (335)
T ss_pred echhhccCc
Confidence 889987744
No 290
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.48 E-value=3e-06 Score=83.76 Aligned_cols=131 Identities=14% Similarity=0.105 Sum_probs=98.2
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCc---hHHHH-HHHHcCCeEEEEecCCCC
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAH---SSVEK-AGLIGLVKMRYIESDDKL 275 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH---~Sv~k-aa~lg~~~v~~Vp~d~~g 275 (375)
..++-+++|..|..+|+..... +++.|+.|..-+ +.... ...-.|++++.|..+
T Consensus 78 ~aa~a~aSG~AA~~~ai~~la~-------------------aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~--- 135 (426)
T COG2873 78 VAALAVASGQAAITYAILNLAG-------------------AGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD--- 135 (426)
T ss_pred hhhhhhccchHHHHHHHHHhcc-------------------CCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC---
Confidence 3467788999999888875432 234555554433 22222 234567889988765
Q ss_pred CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596 276 SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN 355 (375)
Q Consensus 276 ~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD 355 (375)
|++.++++|+++++ +|.+..-.++.+.|-||+.|++||+++++.++||-.++...++-|. -. .||
T Consensus 136 --d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~----~h---GAD 200 (426)
T COG2873 136 --DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPI----EH---GAD 200 (426)
T ss_pred --CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecchh----hc---CCC
Confidence 79999999999876 5666666689999999999999999999999999999998554331 22 379
Q ss_pred EEEEcCcccCCC
Q psy1596 356 SIAFNPSKWLMV 367 (375)
Q Consensus 356 Si~~d~HK~l~~ 367 (375)
-|+=|..||++.
T Consensus 201 IVvHS~TK~igG 212 (426)
T COG2873 201 IVVHSATKYIGG 212 (426)
T ss_pred EEEEeecccccC
Confidence 999999999874
No 291
>KOG1360|consensus
Probab=98.46 E-value=3e-06 Score=84.27 Aligned_cols=192 Identities=16% Similarity=0.106 Sum_probs=132.1
Q ss_pred cCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC
Q psy1596 121 YKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN 200 (375)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~ 200 (375)
|-....-|+++..+.+-|.+.. .-.|..+.+.|+...+..+.+.|++|-+-+ .
T Consensus 181 YLgms~Hp~V~~A~~~tl~~hG-----~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~---------a------------- 233 (570)
T KOG1360|consen 181 YLGMSRHPEVLDAMHDTLDRHG-----AGAGGTRNISGHSKHHVRLEAELADLHQKE---------A------------- 233 (570)
T ss_pred cccccCChHHHHHHHHHHHHcC-----CCcCCccccCCCCchhhhHHHHHHHHhcCc---------c-------------
Confidence 3333344556666655555532 123455667888888899999999986655 2
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHH
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGD 280 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e 280 (375)
.++-++.-.||-..|...-. ..|+.+||..+..|.|+..+.+-.+..-.....+ |++
T Consensus 234 -ALlFsSCfVANDstLftLak-----------------~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHN-----D~~ 290 (570)
T KOG1360|consen 234 -ALLFSSCFVANDSTLFTLAK-----------------KLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHN-----DLD 290 (570)
T ss_pred -eeeeeeeeeccchHHHHHHH-----------------HCCCcEEeccccchHHHHHHhhhcCCcceeeccC-----CHH
Confidence 23333334444433332211 1356789999999999999998887765566665 899
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhh---hhhhcCC-CcccE
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEF---RKWLAGV-EYANS 356 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~---~~~~~gi-e~aDS 356 (375)
+|++.+++... ..|.+|......++.|+|-||+||++++++||..-.+|..|+.+.+ -|.- ... +|+ .+.|.
T Consensus 291 hL~~lL~~~~~--svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlY-G~rGaGvger-dGvm~kvDi 366 (570)
T KOG1360|consen 291 HLEQLLQSSPK--SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLY-GPRGAGVGER-DGVMHKVDI 366 (570)
T ss_pred HHHHHHHhCCC--CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccc-cCCCCCcccc-CCcchhhhh
Confidence 99999987543 4688899888899999999999999999999999999999887643 1110 001 233 56788
Q ss_pred EEEcCcccCC
Q psy1596 357 IAFNPSKWLM 366 (375)
Q Consensus 357 i~~d~HK~l~ 366 (375)
|+=..-|.++
T Consensus 367 IsGTLgKafG 376 (570)
T KOG1360|consen 367 ISGTLGKAFG 376 (570)
T ss_pred cccchhhhcc
Confidence 8877777543
No 292
>KOG1357|consensus
Probab=98.43 E-value=4.4e-07 Score=91.27 Aligned_cols=141 Identities=11% Similarity=0.051 Sum_probs=105.2
Q ss_pred CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596 152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH 231 (375)
Q Consensus 152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~ 231 (375)
.+....|+.+.++++.+-.++++|.+. ..+|..| -..|-+.+-+.
T Consensus 173 ss~~e~G~~~~hkelE~l~A~f~g~e~----------------------a~vF~mG-f~TNs~~~p~l------------ 217 (519)
T KOG1357|consen 173 SSRHEAGTTEEHKELEELVARFLGVED----------------------AIVFSMG-FATNSMNIPSL------------ 217 (519)
T ss_pred ccchhcccHHHHHHHHHHHHHhcCCcc----------------------eEEEecc-ccccccCccee------------
Confidence 345568999999999999999999982 2344333 22221111111
Q ss_pred CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCC-------ccEEEEEEcC
Q psy1596 232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHL-------IPFFVCGTLG 304 (375)
Q Consensus 232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~-------~p~~Vv~t~G 304 (375)
+.++..|+..+..|.|+.-+|++.|+.+|....+ |+..||+.|++....|. .-++|+.-.-
T Consensus 218 -------~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegi 285 (519)
T KOG1357|consen 218 -------LGKGSLIISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGI 285 (519)
T ss_pred -------ecCCcceeeccccchheeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccc
Confidence 1134568888999999999999999999999987 78889999987654432 1234444445
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596 305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSF 339 (375)
Q Consensus 305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~ 339 (375)
.++.|.++++.++..++++|..+||+|+||.++++
T Consensus 286 ysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~ 320 (519)
T KOG1357|consen 286 YSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAM 320 (519)
T ss_pred eeccCeecccHHHHHhhccccEEEEeecccccccc
Confidence 56889999999999999999999999999999875
No 293
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.42 E-value=2.9e-06 Score=83.45 Aligned_cols=127 Identities=9% Similarity=-0.041 Sum_probs=87.9
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHH
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGD 280 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e 280 (375)
..++|+|+++++..++.+ .++..|++.+.++..+...++..|.+++.||.+
T Consensus 66 ~I~it~Gs~~al~~~~~~---------------------~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~-------- 116 (330)
T PRK05664 66 QLLPVAGSQAAIQALPRL---------------------RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA-------- 116 (330)
T ss_pred CEEECcCHHHHHHHHHHc---------------------cCCCEEEEcCCChHHHHHHHHHcCCeEEEechh--------
Confidence 378899999987654321 124578899999999999999888899988863
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCccc--
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN-- 355 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD-- 355 (375)
++++++++ +.+++.+.++++||.+ +.+++|+++|+++++|+++|.+|....-. +... .+..-|
T Consensus 117 ~~~~~~~~-------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~-~s~~----~~~~~~~v 184 (330)
T PRK05664 117 EVEAALDS-------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ-HSLA----ACAHRPGL 184 (330)
T ss_pred hHhhhhcC-------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc-cccc----ccccCCCE
Confidence 35555531 2256777899999988 45777777889999999999999654210 1111 111112
Q ss_pred EEEEcCcccCCCC
Q psy1596 356 SIAFNPSKWLMVH 368 (375)
Q Consensus 356 Si~~d~HK~l~~P 368 (375)
.+.-++.|.++.|
T Consensus 185 i~~~SfSK~~gl~ 197 (330)
T PRK05664 185 IVLRSFGKFFGLA 197 (330)
T ss_pred EEEeeccccccCC
Confidence 4677889988644
No 294
>KOG2862|consensus
Probab=98.40 E-value=6.2e-06 Score=79.83 Aligned_cols=123 Identities=16% Similarity=0.097 Sum_probs=92.3
Q ss_pred CceEEEecCCCchHHHHH--HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-HHHH
Q psy1596 241 SRLVAYCSDQAHSSVEKA--GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-LEEL 317 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~ka--a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-l~eI 317 (375)
|++.+++-...-.+-.-+ ++--|.++..|+.+-......+.+++.+++. .|.+|++|.|.|.||..+| ++.+
T Consensus 91 Pgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh-----~p~~vfv~hgdsSTgV~q~~~~~~ 165 (385)
T KOG2862|consen 91 PGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQH-----KPKAVFVTHGDSSTGVLQDLLAIS 165 (385)
T ss_pred CCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhc-----CCceEEEEecCccccccchHHHHH
Confidence 344454444443433332 2334678888888877789999999999875 3779999999999999988 7778
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
.++|++|+..|.||+.-..+.. ++...-.| +|..-.-..|-+++|.|.|++
T Consensus 166 g~lc~k~~~lllVD~VaSlggt---~F~mDewg---VDvaytgSQKaL~aP~GLsii 216 (385)
T KOG2862|consen 166 GELCHKHEALLLVDTVASLGGT---EFEMDEWG---VDVAYTGSQKALGAPAGLSII 216 (385)
T ss_pred HHHhhcCCeEEEEechhhcCCc---cceehhhc---ccEEEecchhhcCCCCCccee
Confidence 8999999999999997666543 22222234 499999999999999998874
No 295
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.38 E-value=9.6e-06 Score=82.71 Aligned_cols=158 Identities=16% Similarity=0.060 Sum_probs=88.3
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~ 268 (375)
...|+++|||||-.|+..||.....+ +. . .++.+|.....-|-...-+..+.+. .+..
T Consensus 104 ~v~f~~sGseA~e~A~klar~~~~~~-~~--~-------~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~ 173 (423)
T PRK05964 104 HVFFSDSGSVAVEVALKMALQYWRNR-GE--P-------GRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVT 173 (423)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEE
Confidence 47999999999999999999753221 00 0 0122444444445433333332211 1233
Q ss_pred EecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccc
Q psy1596 269 IESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFIC 341 (375)
Q Consensus 269 Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~ 341 (375)
+|.. +....+.++|++.|++.. ..+.+|++.- .....|.+ +.+++|.++|++||+.+++|.++.+....-
T Consensus 174 ~~~~~~d~~~~~~~~l~~~l~~~~---~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G 250 (423)
T PRK05964 174 APFPPDGYEQATLDALEALLEKHA---GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG 250 (423)
T ss_pred eCCCcchhHHHHHHHHHHHHHhCC---CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc
Confidence 3332 111223788888886432 1233444432 13334433 559999999999999999999997643211
Q ss_pred hhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596 342 PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM 374 (375)
Q Consensus 342 ~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l 374 (375)
.-+.....++ ..|.++++ |+++.. ++.|++
T Consensus 251 ~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av 281 (423)
T PRK05964 251 TLFACEQAGV-SPDIMCLS--KGLTGGYLPLAAT 281 (423)
T ss_pred chhHHHhcCC-CCCeeeee--hhhhcCcccceEE
Confidence 1111112344 46877765 998665 355543
No 296
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.37 E-value=1.6e-05 Score=81.26 Aligned_cols=172 Identities=12% Similarity=-0.007 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
+.+.++.+.|++++. + .....+|+++||+||..|+..||... .
T Consensus 86 ~~~~~la~~L~~~~~-~--------------------~~~~v~f~~SGseA~e~AlklAr~~t----------------g 128 (433)
T PRK08117 86 ESILKLAEELAEITP-G--------------------GLDCFFFSNSGAEAIEGALKLAKHVT----------------K 128 (433)
T ss_pred HHHHHHHHHHHHhCC-C--------------------CCCEEEEeCcHHHHHHHHHHHHHHhc----------------C
Confidence 334778888888762 1 11247899999999999999998742 0
Q ss_pred CceEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCCC------------cCHHHHHHHHHHhhhcCCc
Q psy1596 241 SRLVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKLS------------LRGDKLIEAIERDKKKHLI 295 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g~------------md~e~Le~aI~~~~~~g~~ 295 (375)
++.+|.....-|-+..-++.+.+ ..+..+|..+.++ -|.++|++.+++... +..
T Consensus 129 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~ 207 (433)
T PRK08117 129 RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEE 207 (433)
T ss_pred CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC-CCc
Confidence 12355566666766655543221 1233444322221 156677777764211 123
Q ss_pred cEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596 296 PFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC 371 (375)
Q Consensus 296 p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~ 371 (375)
+.+|++.--..+.|.+-+ +++|.++|++||+.+++|.+|+|....-.-+.....++ ..|. +.+-|.++.-+..
T Consensus 208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi--~t~sK~lg~G~pi 284 (433)
T PRK08117 208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDI--MTIAKGIASGLPL 284 (433)
T ss_pred EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCE--eehhhhccCCCcc
Confidence 445555544455677766 99999999999999999999997432111110011233 2464 4667887643444
Q ss_pred ee
Q psy1596 372 TA 373 (375)
Q Consensus 372 g~ 373 (375)
|+
T Consensus 285 ga 286 (433)
T PRK08117 285 SA 286 (433)
T ss_pred ee
Confidence 44
No 297
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.34 E-value=4.5e-05 Score=77.97 Aligned_cols=153 Identities=15% Similarity=0.095 Sum_probs=87.6
Q ss_pred EEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596 202 ITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY 268 (375)
Q Consensus 202 Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~ 268 (375)
..|+ ++|||||-.|+..||... . ++.+|.....-|-...-++.+.+ ..+..
T Consensus 105 ~~f~~~sGseA~e~AlklAr~~t-g---------------r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~ 168 (425)
T PRK09264 105 VQFTGPTGTNAVEAALKLARKVT-G---------------RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTR 168 (425)
T ss_pred EEEeCCCHHHHHHHHHHHHHHhc-C---------------CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEE
Confidence 4564 799999999999999752 0 12233344444543333332211 13455
Q ss_pred EecCCCC--C-cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccc
Q psy1596 269 IESDDKL--S-LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFIC 341 (375)
Q Consensus 269 Vp~d~~g--~-md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~ 341 (375)
+|..... . -|+++|++.+++.......+.+|++.--....|.+ +.+++|.++|++||+++++|.++.|....-
T Consensus 169 ~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG 248 (425)
T PRK09264 169 MPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG 248 (425)
T ss_pred eCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc
Confidence 5543211 1 26788898886532111124455555433444543 579999999999999999999998753222
Q ss_pred hhhhhhhcCCCcccEEEEcCcccCCC-CCccee
Q psy1596 342 PEFRKWLAGVEYANSIAFNPSKWLMV-HFDCTA 373 (375)
Q Consensus 342 ~~~~~~~~gie~aDSi~~d~HK~l~~-P~~~g~ 373 (375)
..+.....++ ..|.++++ |.++. -+.+|+
T Consensus 249 ~~~~~~~~~v-~PDi~t~~--K~l~~~G~piga 278 (425)
T PRK09264 249 TFFSFERAGI-TPDIVTLS--KSISGYGLPMAL 278 (425)
T ss_pred HHHHHhhcCC-CCCEEEec--cccCCCccceEE
Confidence 1111112344 46888775 97653 333444
No 298
>PRK12403 putative aminotransferase; Provisional
Probab=98.34 E-value=2.4e-05 Score=80.90 Aligned_cols=171 Identities=14% Similarity=0.027 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
....+.++.+.|+++++-+ -...+|+++||+||-.|+..||...... +.
T Consensus 96 ~~~~~~~lae~L~~~~p~~---------------------~~~v~f~~SGseA~e~AiklAr~~~~~~-g~--------- 144 (460)
T PRK12403 96 THPAVIELSELLFSLLPGH---------------------YSHAIYTNSGSEANEVLIRTVRRYWQVL-GK--------- 144 (460)
T ss_pred CCHHHHHHHHHHHHhCCCC---------------------cCEEEEeCCcHHHHHHHHHHHHHHHHhh-CC---------
Confidence 3444577888888887522 1247999999999999999999753211 00
Q ss_pred hcCceEEEe-cCCCchHHHHHHHHcCCe-----------EEEEecCCCC----Cc--------CHHHHHHHHHHhhhcCC
Q psy1596 239 INSRLVAYC-SDQAHSSVEKAGLIGLVK-----------MRYIESDDKL----SL--------RGDKLIEAIERDKKKHL 294 (375)
Q Consensus 239 ~~~~~vV~~-S~~aH~Sv~kaa~lg~~~-----------v~~Vp~d~~g----~m--------d~e~Le~aI~~~~~~g~ 294 (375)
..+.+|++ ...-|-+..-++.+.+.. +..+|....+ .+ +.+.|++.+.+... .
T Consensus 145 -~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~--~ 221 (460)
T PRK12403 145 -PQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGA--E 221 (460)
T ss_pred -CCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCC--C
Confidence 01223332 333477766665554322 2333321100 01 13556666643211 1
Q ss_pred ccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 295 IPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 295 ~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
.+.+|++.--....|.+-+ +++|.++|++||+.|++|.+++|......-+.....|++ .|-++ .-|.++
T Consensus 222 ~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~-PDiv~--~gK~lg 294 (460)
T PRK12403 222 NVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFE-PDTLS--IAKGLT 294 (460)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCC-CCeEE--Eccccc
Confidence 2445555444445566666 999999999999999999999876443322222223563 68887 578766
No 299
>KOG0258|consensus
Probab=98.33 E-value=7.2e-06 Score=81.40 Aligned_cols=143 Identities=17% Similarity=0.168 Sum_probs=103.5
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|..-+++.|.+.+.+-=|.|. ++....+|+|+|.|...-|......
T Consensus 113 qGv~~vR~~VA~~I~rRDG~p~-------------------~p~dI~LT~GAS~ai~~il~l~~~~-------------- 159 (475)
T KOG0258|consen 113 QGVPGVRKHVAEFIERRDGIPA-------------------DPEDIFLTTGASPAIRSILSLLIAG-------------- 159 (475)
T ss_pred cCChhHHHHHHHHHHhccCCCC-------------------CHHHeeecCCCcHHHHHHHHHHhcC--------------
Confidence 3444556778888888777663 5667899999999977666554331
Q ss_pred hhhcCceEEEecCCCchHHHHHHH-HcCCe-EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVK-MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--- 311 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~-v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--- 311 (375)
++.-|+++-.-+.-....+. +++.. ...+.-..+|.+|+++|++.+++.+ ++..|.++|+.-+-++||.+
T Consensus 160 ----~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~ 234 (475)
T KOG0258|consen 160 ----KKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSE 234 (475)
T ss_pred ----CCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcH
Confidence 23346665544433333333 44433 2344445689999999999999887 78888888888888999988
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596 312 DNLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 312 Dpl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
..|++|..+|.++++.|..|..|=-.
T Consensus 235 e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 235 ENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred HHHHHHHHHHHHcCeEEechHHHHhh
Confidence 78999999999999999999987544
No 300
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.33 E-value=5.9e-06 Score=81.76 Aligned_cols=145 Identities=11% Similarity=-0.066 Sum_probs=95.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+++++.+|++ ++...++|+|+++++.. +..+.. ++.
T Consensus 56 ~~L~~~ia~~~~~~--------------------~~~~I~i~~Gs~e~i~~-l~~~~~-------------------~g~ 95 (339)
T PRK06959 56 DGLAACAARYYGAP--------------------DAAHVLPVAGSQAAIRA-LPALLP-------------------RGR 95 (339)
T ss_pred HHHHHHHHHHhCCC--------------------CcccEEECcCHHHHHHH-HHHhcC-------------------CCe
Confidence 57889999999997 33467888888888653 221111 223
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~i 320 (375)
|++.+.++..+..+++..|.+++.||.++ +.+.+ . ..+++.+.++|+||.+-+ +.+|++.
T Consensus 96 -v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~~~~----~------~~~v~l~nPnNPTG~~~s~~~l~~l~~~ 158 (339)
T PRK06959 96 -VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DTLPA----A------LTHLIVVNPNNPTAERLPAARLLRWHAQ 158 (339)
T ss_pred -EEEcCCCcHHHHHHHHHCCCEEEeecccc------hhccc----c------CCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 56688898888888888888888888753 22211 1 125777789999999855 4455555
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
|++++.|+++|.+|.-.... +...... .-+. =.+.-++.|.++.|
T Consensus 159 ~~~~~~~vI~DEay~~~~~~-~s~~~~~-~~~~-vi~l~SfSK~~gl~ 203 (339)
T PRK06959 159 LAARGGTLIVDEAFADTLPA-ASLAAHT-DRPG-LVVLRSVGKFFGLA 203 (339)
T ss_pred HHHcCCEEEEECCCccCCCc-ccchhcc-CCCC-EEEEecChhhcCCc
Confidence 67889999999999875321 2111111 1111 13566889987644
No 301
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.33 E-value=2.9e-05 Score=81.21 Aligned_cols=152 Identities=11% Similarity=0.007 Sum_probs=90.8
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCe------------EEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK------------MRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~------------v~~ 268 (375)
...|+++||+||-.|+.+||.+.... +. + .++.+|.....-|-+..-++.+.+.. +..
T Consensus 153 ~v~f~~SGsEA~e~AlKlAr~~~~~~-g~--~-------~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~ 222 (504)
T PLN02760 153 KVFFTNSGSEANDTQVKLVWYYNNAL-GR--P-------NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLH 222 (504)
T ss_pred EEEEeCChHHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEE
Confidence 47899999999999999998753110 00 0 02346667777787766665544321 222
Q ss_pred EecCCCCC-------------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596 269 IESDDKLS-------------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD 331 (375)
Q Consensus 269 Vp~d~~g~-------------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD 331 (375)
++....++ ...++|++.|.+.. +..+.+|++.--....|.+-| +++|.++|++||+.|++|
T Consensus 223 ~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~D 300 (504)
T PLN02760 223 TDCPHYWRFHLPGETEEEFSTRLADNLENLILKEG--PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIAD 300 (504)
T ss_pred eCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEec
Confidence 33211111 11245777765321 123445554443345577777 999999999999999999
Q ss_pred cccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
.++.|.....+-+.....|+ ..|.+++ -|.++.
T Consensus 301 EV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~lgg 333 (504)
T PLN02760 301 EVICAFGRLGTMFGCDKYNI-KPDLVSL--AKALSS 333 (504)
T ss_pred chhhCCcccchhhHHHhcCC-CCcEEEe--cccccC
Confidence 99966544333222223466 3787666 677653
No 302
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.29 E-value=4.8e-05 Score=78.28 Aligned_cols=172 Identities=11% Similarity=-0.008 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+.++.+.|.+++.-+ ......|+.+|||||-.|+..||... . ++
T Consensus 99 ~~~lAe~L~~~~p~~--------------------~~~~v~f~~SGsEA~e~AlklAr~~t-g---------------r~ 142 (441)
T PRK05769 99 AVELAERLVEIAPGG--------------------FEKKVFFTNSGTESNEAAIKIARYHT-G---------------RK 142 (441)
T ss_pred HHHHHHHHHHhCCCC--------------------CCCEEEECCchHHHHHHHHHHHHHHh-C---------------CC
Confidence 367778888776321 11257899999999999999999752 0 12
Q ss_pred eEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCCC-----cC--------HHHHHHHHHHhhhcCCcc
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKLS-----LR--------GDKLIEAIERDKKKHLIP 296 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g~-----md--------~e~Le~aI~~~~~~g~~p 296 (375)
.+|.....-|-...-++.+.+ ..+..+|..+..+ -| .+.|++.+.+....+..+
T Consensus 143 ~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~i 222 (441)
T PRK05769 143 YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEV 222 (441)
T ss_pred eEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCce
Confidence 234444444544433333321 1233444321111 11 233555332211112234
Q ss_pred EEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 297 FFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 297 ~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
.+|++.--....|.+-| +++|.++|++||+.+++|.++.|....-.-+.....|+ ..|-++++ |.++.-++.|
T Consensus 223 aavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~g 299 (441)
T PRK05769 223 AAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPLG 299 (441)
T ss_pred EEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEEc--ccccCCcccE
Confidence 45555544445677767 99999999999999999999987432211111111244 35888764 7666444455
Q ss_pred e
Q psy1596 373 A 373 (375)
Q Consensus 373 ~ 373 (375)
+
T Consensus 300 a 300 (441)
T PRK05769 300 A 300 (441)
T ss_pred E
Confidence 4
No 303
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.27 E-value=5.1e-05 Score=77.67 Aligned_cols=145 Identities=12% Similarity=0.013 Sum_probs=89.8
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC----------------
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV---------------- 264 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~---------------- 264 (375)
...|+++|||||-.|+..||.... ++.+|.....-|-...-++.+.+.
T Consensus 111 ~v~f~~sGseA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (428)
T PRK12389 111 KVRFVNSGTEAVMTTIRVARAYTG----------------RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKS 174 (428)
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhC----------------CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCc
Confidence 478999999999999999997521 122444444455443333333221
Q ss_pred ---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccC
Q psy1596 265 ---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 265 ---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
.+..+|.+ |+++|++.+++.. ..+.+|+..---...|.+-| +++|.++|++||+.+++|.++.|+
T Consensus 175 ~~~~~~~~~~~-----d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~ 246 (428)
T PRK12389 175 IAQEVITVPFN-----DIEALKEALDKWG---DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF 246 (428)
T ss_pred ccCceEEcCCC-----CHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 12222221 7899999987432 22455665544455677777 999999999999999999999886
Q ss_pred cccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 338 SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 338 ~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
...........|+ ..|-+++ -|.++.-++.|+
T Consensus 247 -Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~a 278 (428)
T PRK12389 247 -RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGA 278 (428)
T ss_pred -ccCcchhhHHhCC-CCCeeee--chhhcCCCceeE
Confidence 3321111112355 4787655 676654344443
No 304
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.27 E-value=1.4e-05 Score=88.23 Aligned_cols=154 Identities=10% Similarity=0.042 Sum_probs=99.3
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.|+.+.--+...++++|.|++. ...-+..++|.+.= |+..++... .
T Consensus 105 QG~Le~l~e~Qt~i~eLtGm~~---------------------aNaSl~d~atA~aE-a~~~a~~~~-~----------- 150 (939)
T TIGR00461 105 QGRLEALLNFQTVVSDLTGLPV---------------------ANASLLDEGTAAAE-AMALSFNVS-K----------- 150 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCCCh---------------------hhhhccchhhHHHH-HHHHHHHhh-c-----------
Confidence 5555555788899999999993 12345555565432 333232110 0
Q ss_pred hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD 312 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD 312 (375)
.++..|++++..|......++ ..|.+++.++ +++|++.+ + .+.|+++.+ +..|.+.
T Consensus 151 ---~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~--~------~~~v~~q~P-n~~G~ie 210 (939)
T TIGR00461 151 ---KKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV--D------VFGCLLQYP-ATDGSIL 210 (939)
T ss_pred ---CCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC--C------EEEEEEECC-CCCeEEe
Confidence 012469999999988776543 4567777763 34565554 2 346777776 5689999
Q ss_pred cHHHHHHHHHhcCCEEEEecccccCccc-chhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 313 NLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
|+++|++++++.|.++.+++=.-+..++ .|. . - .||.+ +..||-+++|.+-|
T Consensus 211 d~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg--e--~---GaDi~-vg~~q~fg~p~g~G 263 (939)
T TIGR00461 211 DYKQLIDALHSHKSLVSVAADLMALTLLTPPG--H--Y---GADIV-LGSSQRFGVPMGYG 263 (939)
T ss_pred cHHHHHHHHHHcCCEEEEEechHHhCCcCCHH--H--c---CCcEE-eeCCCccCCCCCCC
Confidence 9999999999999999996543333222 221 1 1 47988 77777778887765
No 305
>KOG0053|consensus
Probab=98.24 E-value=1.8e-05 Score=79.78 Aligned_cols=144 Identities=11% Similarity=0.076 Sum_probs=105.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
..+.+.++++-|.+ ..+..++|..|...++..... .+.
T Consensus 80 ~~le~~iaal~ga~-----------------------~~l~fsSGmaA~~~al~~L~~-------------------~g~ 117 (409)
T KOG0053|consen 80 DVLESGIAALEGAA-----------------------HALLFSSGMAAITVALLHLLP-------------------AGD 117 (409)
T ss_pred HHHHHHHHHHhCCc-----------------------eEEEecccHHHHHHHHHHhcC-------------------CCC
Confidence 56777788887665 367788888788777765442 233
Q ss_pred EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
.|++....+.-..+-+ ...|+....+.++ |++.+++++++. ..+|..-.++++++.+-||++|++
T Consensus 118 ~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-----~~~~~~~~i~~~------t~~V~~ESPsNPll~v~DI~~l~~ 186 (409)
T KOG0053|consen 118 HIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-----DLKKILKAIKEN------TKAVFLESPSNPLLKVPDIEKLAR 186 (409)
T ss_pred cEEEeCCCcccHHHHHHHHHHHhCceeeeechh-----hHHHHHHhhccC------ceEEEEECCCCCccccccHHHHHH
Confidence 5666655554444333 2345566666654 677888888774 348999999999999999999999
Q ss_pred HHHhcCCEEEEecccccCcccchhhhhhhcCCCc-ccEEEEcCcccCCCC
Q psy1596 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEY-ANSIAFNPSKWLMVH 368 (375)
Q Consensus 320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~-aDSi~~d~HK~l~~P 368 (375)
+|+++|+.+.||..++.+...- .+.. ||-++=|..||++.-
T Consensus 187 la~~~g~~vvVDnTf~~p~~~~--------pL~lGADIV~hSaTKyi~Gh 228 (409)
T KOG0053|consen 187 LAHKYGFLVVVDNTFGSPYNQD--------PLPLGADIVVHSATKYIGGH 228 (409)
T ss_pred HHhhCCCEEEEeCCcCcccccC--------hhhcCCCEEEEeeeeeecCC
Confidence 9999999999999999984322 2333 899999999998754
No 306
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.23 E-value=3.9e-05 Score=78.04 Aligned_cols=145 Identities=14% Similarity=-0.006 Sum_probs=83.2
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHH--cCC--------------
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLI--GLV-------------- 264 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~l--g~~-------------- 264 (375)
..+|+.|||+|+..|+..||... . ++.+|.....-|-...-...+ .+.
T Consensus 106 ~v~~~~sGseA~e~Alk~ar~~~-g---------------r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (423)
T TIGR00713 106 MVRFVNSGTEATMSAVRLARGYT-G---------------RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPED 169 (423)
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-C---------------CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcc
Confidence 47999999999999999998752 0 122333333344332222211 000
Q ss_pred ---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccC
Q psy1596 265 ---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 265 ---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
.+..+|. -|+++|+++|++.. ..+.+|+..---.++|.+-+ +++|.++|++||+++++|.+|.+.
T Consensus 170 ~~~~~~~~~~-----~d~~~l~~~i~~~~---~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~ 241 (423)
T TIGR00713 170 FAKLTLVLPY-----NDLEALEEVFEEYG---EEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF 241 (423)
T ss_pred cccceEEeCC-----CCHHHHHHHHHHcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc
Confidence 1222221 28999999997421 12345555422223687754 899999999999999999999775
Q ss_pred cccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 338 SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 338 ~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
..-........++ ..|.+ .+-|.+..-+..|+
T Consensus 242 -r~g~~~~~~~~~~-~pDi~--t~sK~l~~G~pig~ 273 (423)
T TIGR00713 242 -RVALGGAQEYFGV-EPDLT--TLGKIIGGGLPVGA 273 (423)
T ss_pred -ccCcchhHHHhCC-Ccchh--hhhhhhcCCCceee
Confidence 3211111112233 24643 46787763333343
No 307
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.23 E-value=9e-05 Score=75.52 Aligned_cols=154 Identities=15% Similarity=0.081 Sum_probs=88.0
Q ss_pred EEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596 202 ITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY 268 (375)
Q Consensus 202 Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~ 268 (375)
..|+ ++|||||-.|+..||... . ++.+|-....-|-...-+..+.+ ..+..
T Consensus 101 ~~f~~~sGseA~e~AlklAr~~t-g---------------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 164 (412)
T TIGR02407 101 VQFPGPTGTNAVESALKLARKVT-G---------------RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSR 164 (412)
T ss_pred EEEeCCCchHHHHHHHHHHhhhc-C---------------CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEE
Confidence 4564 899999999999999742 0 12234444444544433333221 12344
Q ss_pred EecCCCCC---cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc----cccHHHHHHHHHhcCCEEEEecccccCcccc
Q psy1596 269 IESDDKLS---LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA----FDNLEELGPICEKEGLWLHVDAAYAGSSFIC 341 (375)
Q Consensus 269 Vp~d~~g~---md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~ 341 (375)
+|..+... -+++.|++.+++.......+.+|++.---...|. -+-+++|.++|++||++|++|..+.|....-
T Consensus 165 ~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 244 (412)
T TIGR02407 165 MPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG 244 (412)
T ss_pred CCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 55422111 2467788888643211112345554433334454 3669999999999999999999998654322
Q ss_pred hhhhhhhcCCCcccEEEEcCcccCCC-CCcceee
Q psy1596 342 PEFRKWLAGVEYANSIAFNPSKWLMV-HFDCTAM 374 (375)
Q Consensus 342 ~~~~~~~~gie~aDSi~~d~HK~l~~-P~~~g~l 374 (375)
..+.....++ ..|-++++ |+++. -+..|++
T Consensus 245 ~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav 275 (412)
T TIGR02407 245 TFFSFEPAGI-EPDIVCLS--KSISGYGLPLALT 275 (412)
T ss_pred hhHHhcccCC-CCCEEEec--hhccCCccceeEE
Confidence 2222222345 46877765 99764 4445554
No 308
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.22 E-value=7.7e-05 Score=76.83 Aligned_cols=146 Identities=14% Similarity=0.036 Sum_probs=89.8
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~ 268 (375)
...|+.+|||||-.|+..||.....+ .+..+|.....-|-...-+..+.+. .++.
T Consensus 136 ~v~f~~SGsEA~e~AlklAr~~t~~~-------------gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~ 202 (442)
T TIGR03372 136 YSFFCNSGTESVEAALKLAKAYQSPR-------------GKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHH 202 (442)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHhhc-------------CCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEE
Confidence 47899999999999999999753210 0112344444445444333333221 2334
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhh
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEF 344 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~ 344 (375)
+|.+ |.+.+++.+++....+....+|++.-.....|.+-| +++|.++|++||+.+++|.++.|....-.-+
T Consensus 203 ~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~ 277 (442)
T TIGR03372 203 VAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMF 277 (442)
T ss_pred eCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccch
Confidence 4432 678888888654333334556665554455677766 9999999999999999999997643222111
Q ss_pred hhhhcCCCcccEEEEcCcccCCC
Q psy1596 345 RKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 345 ~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
.....|+ ..|.++ .-|.++.
T Consensus 278 a~e~~gv-~PDivt--~gK~lg~ 297 (442)
T TIGR03372 278 ACEHEGV-QPDILC--LAKALGG 297 (442)
T ss_pred hhhhcCC-CCCeee--ehhhhcC
Confidence 1122355 478776 5787763
No 309
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.20 E-value=4.5e-05 Score=78.00 Aligned_cols=115 Identities=13% Similarity=0.053 Sum_probs=74.0
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEE-
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMR- 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~- 267 (375)
...|+.|||+||..|+..+|... . ++.+|.....-|-...-+..+.+ ...+
T Consensus 108 ~v~~~~sGseA~e~Aik~a~~~~-g---------------~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (426)
T PRK00062 108 MVRMVNSGTEATMSAIRLARGYT-G---------------RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPED 171 (426)
T ss_pred EEEEecCHHHHHHHHHHHHHHHh-C---------------CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcc
Confidence 47899999999999999998742 0 12244455555654322222110 0000
Q ss_pred ----EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccC
Q psy1596 268 ----YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 268 ----~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
.+.. +. -|+++|++.+++.. ....+|++.-...+.|.+-+ +++|.++|++||+++++|.+|.|.
T Consensus 172 ~~~~~~~~-~~--~d~~~l~~~i~~~~---~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~ 243 (426)
T PRK00062 172 FAKHTLTA-PY--NDLEAVEELFEEYG---DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF 243 (426)
T ss_pred cccceEEc-CC--CCHHHHHHHHHhCC---CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc
Confidence 0111 11 27899999987532 12445666644556788866 999999999999999999999865
No 310
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.19 E-value=6.5e-05 Score=77.70 Aligned_cols=145 Identities=14% Similarity=0.045 Sum_probs=89.1
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecC-CCchHHHHHHHHcCC------------eEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD-QAHSSVEKAGLIGLV------------KMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~-~aH~Sv~kaa~lg~~------------~v~ 267 (375)
...|+.+|||||-.|+..||.....+ .+..|++.+ .-|-...-++.+.+. .+.
T Consensus 143 ~v~f~~SGsEAve~AlklAr~~t~~~--------------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~ 208 (459)
T PRK11522 143 YSFFCNSGTESVEAALKLAKAYQSPR--------------GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFR 208 (459)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhccC--------------CCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCc
Confidence 47899999999999999999753110 022344443 344333333333221 122
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchh
Q psy1596 268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPE 343 (375)
Q Consensus 268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~ 343 (375)
.+|.+ |.++|++++++....+..+.+|++.-.....|.+-| ++++.++|++||+.+++|.++.|....-.-
T Consensus 209 ~~~~~-----d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~ 283 (459)
T PRK11522 209 HVPFG-----NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKM 283 (459)
T ss_pred ccCCC-----CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchh
Confidence 23321 678999999764333334556666655556677766 999999999999999999999764322211
Q ss_pred hhhhhcCCCcccEEEEcCcccCCC
Q psy1596 344 FRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 344 ~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
+.....|+ ..|-+++ -|.++.
T Consensus 284 ~a~e~~gv-~PDivt~--gK~lgg 304 (459)
T PRK11522 284 FACEHENV-QPDILCL--AKALGG 304 (459)
T ss_pred hhhhccCC-CCCEEEe--chhhhC
Confidence 11112355 4687755 687764
No 311
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.18 E-value=3.9e-05 Score=77.05 Aligned_cols=156 Identities=13% Similarity=0.026 Sum_probs=94.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|++++|++ ..+|+++||+|+-.|+.+||.... ++.
T Consensus 69 ~~la~~l~~~~~~~-----------------------~v~~~~SGseA~e~Alklar~~~g----------------r~~ 109 (364)
T PRK04013 69 EEMLEELSKWVNYE-----------------------YVYMGNSGTEAVEAALKFARLYTG----------------RKE 109 (364)
T ss_pred HHHHHHHHhhcCCC-----------------------EEEEeCchHHHHHHHHHHHHHHhC----------------CCE
Confidence 56677777776654 379999999999999999987520 122
Q ss_pred EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
+|..+..-|-+..-+..+.+ ..+..+|.+ |++++++.+.+. +.+|++.--....|.+
T Consensus 110 Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~i~~~------~aAvivEpi~g~gG~~ 178 (364)
T PRK04013 110 IIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN-----DVEAAKEAITKE------TAAVIFEPIQGEGGIV 178 (364)
T ss_pred EEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC-----CHHHHHHHhcCC------cEEEEEcCCcCCCCCc
Confidence 44444444544333333211 112333322 678888888532 3355554433333443
Q ss_pred -cc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 312 -DN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 312 -Dp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
-| +++|.++|++||+.++.|.++.|. ..-.-+.....++ ..|.+++ -|.++.-++.|+
T Consensus 179 ~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a 240 (364)
T PRK04013 179 PAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSL 240 (364)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEE
Confidence 23 999999999999999999999875 3322222222355 4787777 666544344443
No 312
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.17 E-value=0.00014 Score=72.24 Aligned_cols=175 Identities=16% Similarity=0.090 Sum_probs=101.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.++|.++++-. .....|+.+||+||-.|+..||.+...+... .++.
T Consensus 62 ~~la~~L~~~~p~~---------------------~~~v~f~~sGseAve~Alkla~~~~~~~~~~----------~r~~ 110 (339)
T PF00202_consen 62 AELAEKLAELFPGG---------------------LDRVFFANSGSEAVEAALKLARQYHNKRAYT----------GRRK 110 (339)
T ss_dssp HHHHHHHHHHSSTT---------------------EEEEEEESSHHHHHHHHHHHHHHHHHHTHHH----------TTTE
T ss_pred hhhhhhhhhccccc---------------------cceeeeccCchHHHHHHHHHhhccccccccc----------CCce
Confidence 68888999988322 1357999999999999999999432211110 1122
Q ss_pred EEEecCCCchHHHHHHHHc------------CCeEEEEecCCCCC-----cCHHHHHHHHHHhhhcCCccEEEEEEcCCC
Q psy1596 244 VAYCSDQAHSSVEKAGLIG------------LVKMRYIESDDKLS-----LRGDKLIEAIERDKKKHLIPFFVCGTLGTT 306 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg------------~~~v~~Vp~d~~g~-----md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT 306 (375)
++-....-|-...-+..+. ...+..+|..+... -..+.+++.+.+.... ...+|++.-...
T Consensus 111 il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~iaavivEPi~g 188 (339)
T PF00202_consen 111 ILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNAD--EIAAVIVEPIQG 188 (339)
T ss_dssp EEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGG--GEEEEEEESSBT
T ss_pred EEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCC--cEEEEEEecccc
Confidence 3444444454333333321 12457777642111 0112244444432221 234555555444
Q ss_pred Ccccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 307 GACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 307 ~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
..|.+ +=+++|.++|++||+.+++|..+.|.....+-+.....|+ ..|.+++. |.+..-++.|++
T Consensus 189 ~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav 257 (339)
T PF00202_consen 189 EGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAV 257 (339)
T ss_dssp TTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEE
T ss_pred ccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccc
Confidence 55654 3489999999999999999999998654333222223455 57999997 776655666554
No 313
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.12 E-value=5e-05 Score=76.38 Aligned_cols=160 Identities=17% Similarity=0.121 Sum_probs=101.4
Q ss_pred HHHHHHHHHHcC-CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 164 SKVLDFVSKENA-TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 164 ~~v~~wLa~llG-~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
.++.++|+++.+ .+ ..+|+.||||||=.|+..||.+... + .+.
T Consensus 87 ~~la~~L~~~s~~~d-----------------------~vff~NSGaEA~EaAiKlARk~~~~------~-------~k~ 130 (404)
T COG4992 87 AELAEKLVELSPFAD-----------------------RVFFCNSGAEANEAALKLARKYTGD------P-------EKS 130 (404)
T ss_pred HHHHHHHHhhCcccc-----------------------EEEEcCCcHHHHHHHHHHHHHHcCC------C-------CCc
Confidence 788888888876 33 4789999999999999999986420 0 011
Q ss_pred eEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA 310 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa 310 (375)
-+|.+...=|--..-++.+++ ..++.||-+ |+++|+++|++++. +|++-----+.|.
T Consensus 131 ~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~~ta------AvivEPIQGEgGV 199 (404)
T COG4992 131 KIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDEDTA------AVIVEPIQGEGGV 199 (404)
T ss_pred EEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhccCeE------EEEEecccCCCCC
Confidence 234444444422222221111 135566654 89999999998643 5555543345555
Q ss_pred c----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 311 F----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 311 v----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+ +=++++.++|++||+.++.|..+.|....-.-+.....|+ ..|-+++ -|.|+.-++.|+
T Consensus 200 ~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tl--aK~LgGG~PigA 263 (404)
T COG4992 200 IPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTL--AKALGGGFPIGA 263 (404)
T ss_pred CCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCC-CCCEEEe--eccccCCcccee
Confidence 4 4489999999999999999999998654332222223355 4677766 455554455554
No 314
>PRK06541 hypothetical protein; Provisional
Probab=98.12 E-value=0.00021 Score=73.99 Aligned_cols=152 Identities=16% Similarity=0.053 Sum_probs=86.1
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~ 268 (375)
...|+++||||+-.|+..||...... +. + .+..+|.....-|-...-+..+.+ ..+..
T Consensus 114 ~v~f~~sGseAve~AlklAr~~~~~~-g~--~-------~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~ 183 (460)
T PRK06541 114 RVFFTTGGSEAVESAWKLAKQYFKLT-GK--P-------GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFR 183 (460)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhc-CC--C-------CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEE
Confidence 57899999999999999999753210 00 0 012234444444544333332211 12333
Q ss_pred EecCCCCC-----cC--------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596 269 IESDDKLS-----LR--------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD 331 (375)
Q Consensus 269 Vp~d~~g~-----md--------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD 331 (375)
+|.....+ -+ ++.|++++++. ....+.+|+..--....|.+-+ +++|.++|++||+.+++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D 261 (460)
T PRK06541 184 VPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSD 261 (460)
T ss_pred eCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 44322111 12 35677777542 1122444444433556677777 999999999999999999
Q ss_pred cccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
.++.|.......+.....|+ ..|.++ .-|.++.
T Consensus 262 EV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~l~~ 294 (460)
T PRK06541 262 EVICAFGRLGEMFGCERFGY-VPDIIT--CAKGITS 294 (460)
T ss_pred chhhCCCcCchhhhhhhcCC-CCCEEE--ecccccC
Confidence 99955433322222222355 468776 5787664
No 315
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.11 E-value=6e-05 Score=75.66 Aligned_cols=148 Identities=18% Similarity=0.064 Sum_probs=99.0
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG 279 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~ 279 (375)
..++++.+.+.|.+..+.+.-+.. ..+.++. -.+. ..|.++...++++|.+++.|-+ .++-..
T Consensus 84 ea~~ivnnn~aAVll~~~al~~~~-------------EvVis~g-~lV~-gg~~~v~d~~~~aG~~l~EvG~--tn~t~~ 146 (395)
T COG1921 84 EAAAIVNNNAAAVLLTLNALAEGK-------------EVVVSRG-ELVE-GGAFRVPDIIRLAGAKLVEVGT--TNRTHL 146 (395)
T ss_pred hheeeECCcHHHHHHHHhhhccCC-------------eEEEEcc-cccc-CCCCChhHHHHHcCCEEEEecc--cCcCCH
Confidence 357778777777666655432210 0000111 1233 6899999999999998877754 456788
Q ss_pred HHHHHHHHHhhhcCCccEEEEEEcCCC--CccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEE
Q psy1596 280 DKLIEAIERDKKKHLIPFFVCGTLGTT--GACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSI 357 (375)
Q Consensus 280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT--~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi 357 (375)
.+++.+|.+.++ ++.-+..++ .+|. =+++++++||+++|++++||+|-|.-.-..|..+..++ ..||-+
T Consensus 147 ~d~~~AIne~ta------~llkV~s~~~~f~~~-l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV 217 (395)
T COG1921 147 KDYELAINENTA------LLLKVHSSNYGFTGM-LSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLV 217 (395)
T ss_pred HHHHHHhccCCe------eEEEEeecccccccc-ccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEE
Confidence 999999988765 444444332 2222 35788999999999999999987764332333343332 247999
Q ss_pred EEcCcccCCCCCcceee
Q psy1596 358 AFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 358 ~~d~HK~l~~P~~~g~l 374 (375)
++|+||.|+.|. +|++
T Consensus 218 ~~SgdKllgGPq-aGii 233 (395)
T COG1921 218 SFSGDKLLGGPQ-AGII 233 (395)
T ss_pred EEecchhcCCCc-cceE
Confidence 999999999998 6654
No 316
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.10 E-value=0.00018 Score=74.08 Aligned_cols=169 Identities=15% Similarity=0.017 Sum_probs=95.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|.++++.+ .....|+.+|||||-.|+..||.... ++.
T Consensus 87 ~~la~~L~~~~p~~---------------------~~~v~f~~sGsEAve~AlklAr~~tg----------------r~~ 129 (443)
T PRK08360 87 LLLAEKLIEIAPGD---------------------NPKVSFGLSGSDANDGAIKFARAYTK----------------RRK 129 (443)
T ss_pred HHHHHHHHHhCCCC---------------------CCEEEEcCCHHHHHHHHHHHHHHhcC----------------CCe
Confidence 56777777776432 12579999999999999999987520 112
Q ss_pred EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCC------------cCHHHHHHHHHHhhhcCCccEEE
Q psy1596 244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLS------------LRGDKLIEAIERDKKKHLIPFFV 299 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~V 299 (375)
++-....-|-...-+..+.+ ..+..+|..+..+ -+.+.+++++++... +..+.+|
T Consensus 130 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~iAAv 208 (443)
T PRK08360 130 ILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVY-AEGVAAL 208 (443)
T ss_pred EEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccC-CCCeEEE
Confidence 33333334433333322221 1234444322111 123456666654211 2235566
Q ss_pred EEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 300 CGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 300 v~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
++.--.+++|.+-+ +++|.++|++||+++++|.+|.+......-+.....++ ..|.+++ -|.++.-+..|+
T Consensus 209 i~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~piga 283 (443)
T PRK08360 209 FAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISA 283 (443)
T ss_pred EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEE
Confidence 66544456776633 99999999999999999999987533221111111244 3576766 888775444444
No 317
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.10 E-value=0.00033 Score=71.48 Aligned_cols=153 Identities=11% Similarity=-0.050 Sum_probs=86.4
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~ 267 (375)
...|+++|||||-.|+..||.... ++.+|.....-|-...-++.+.+ ..+.
T Consensus 96 ~v~f~~sGseA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (420)
T TIGR00700 96 KSVFFNSGAEAVENAVKIARSYTG----------------RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVY 159 (420)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcC----------------CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcE
Confidence 579999999999999999987520 12244444455544433333321 1223
Q ss_pred EEecCCCCC-------c----CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q psy1596 268 YIESDDKLS-------L----RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 268 ~Vp~d~~g~-------m----d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDa 332 (375)
.+|.....+ . +++.+++.+..... +....+|++.--...+|.+-+ +++|.++|++||++|++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DE 238 (420)
T TIGR00700 160 RAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVG-ANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADE 238 (420)
T ss_pred EeCCCccccccccccchhHHHHHHHHHHHHHhhcC-CCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 343311111 1 24567776642211 223455555544444565533 9999999999999999999
Q ss_pred ccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 333 AYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 333 A~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+|.+......-+.....++ ..|.++ .-|.+..-+..|.
T Consensus 239 V~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~ 276 (420)
T TIGR00700 239 VQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSG 276 (420)
T ss_pred cccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEE
Confidence 9987643221111111233 467665 5787764444444
No 318
>PRK06062 hypothetical protein; Provisional
Probab=98.09 E-value=0.00029 Score=72.70 Aligned_cols=146 Identities=15% Similarity=0.022 Sum_probs=87.1
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC-----------eEEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV-----------KMRYI 269 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~-----------~v~~V 269 (375)
...|+++|||||-.|+..||.... ++.+|.....-|-...-++.+.+. .+..+
T Consensus 114 ~v~f~~SGsEAve~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 177 (451)
T PRK06062 114 KVFFTNGGADANEHAVRMARLHTG----------------RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHF 177 (451)
T ss_pred EEEEcCChHHHHHHHHHHHHHhhC----------------CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEe
Confidence 579999999999999999997520 122344444445444434333221 12233
Q ss_pred ecCCCCC------cC-------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q psy1596 270 ESDDKLS------LR-------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 270 p~d~~g~------md-------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDa 332 (375)
+.....+ -| ++.|+++|+... +..+.+|++.---...|.+-| +++|.++|++||+.+++|.
T Consensus 178 ~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DE 255 (451)
T PRK06062 178 FGPFLYRSEFHATTEEEECERALAHLERVIELEG--PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADE 255 (451)
T ss_pred CCCCccccccCCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeec
Confidence 2211111 12 577888875321 122445555443345577777 9999999999999999999
Q ss_pred ccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 333 AYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 333 A~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
++.|......-+.....|+ ..|.+++ -|.++.
T Consensus 256 V~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lgg 287 (451)
T PRK06062 256 VMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNS 287 (451)
T ss_pred cccCCCcCcHHHHHHhcCC-CCCeeee--chhhhc
Confidence 9998644332222223466 5787765 677664
No 319
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.09 E-value=0.00036 Score=71.89 Aligned_cols=153 Identities=15% Similarity=0.044 Sum_probs=84.7
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~ 267 (375)
...|+++|||||-.|+..||.... ++.+|.....-|-...-++.+.+ ..+.
T Consensus 105 ~v~f~~SGseA~e~AiklAr~~tg----------------r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~ 168 (445)
T PRK08593 105 RVTFGLSGSDANDGIIKFARAYTG----------------RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFV 168 (445)
T ss_pred EEEECCchHHHHHHHHHHHHHhhC----------------CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcE
Confidence 578999999999999999987520 12244445555655444443322 1234
Q ss_pred EEecCCCCC-----cCH-------HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596 268 YIESDDKLS-----LRG-------DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD 331 (375)
Q Consensus 268 ~Vp~d~~g~-----md~-------e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD 331 (375)
.+|..+..+ -+. +++++.+++... +....+|++.-.....|.+-+ +++|.++|++||+.+++|
T Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~D 247 (445)
T PRK08593 169 HIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLP-ADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVD 247 (445)
T ss_pred EeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcC-CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 454322211 122 334444432111 112445555544445566655 999999999999999999
Q ss_pred cccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.++.|....-..+.....|+ ..|.+++ -|.++.-++.|+
T Consensus 248 Ev~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~ga 286 (445)
T PRK08593 248 DIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSA 286 (445)
T ss_pred chhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEE
Confidence 99966432211111111254 4687765 566543233333
No 320
>PLN00144 acetylornithine transaminase
Probab=98.08 E-value=0.00012 Score=73.77 Aligned_cols=157 Identities=14% Similarity=0.083 Sum_probs=86.5
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~ 268 (375)
...|+++|||||-.|+..||.....+......+ ....+..++.....-|-...-+..+.+. .+..
T Consensus 74 ~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~---~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~ 150 (382)
T PLN00144 74 RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDP---AASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTF 150 (382)
T ss_pred eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccc---cccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEE
Confidence 478999999999999999997532110000000 0000122444454555444434333221 1233
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--cc--HHHHHHHHHhcCCEEEEecccccCcccchhh
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--DN--LEELGPICEKEGLWLHVDAAYAGSSFICPEF 344 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--Dp--l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~ 344 (375)
+|.+ |+++|++.++.. .+.+|++.--.++.|.+ ++ +++|.++|++||+++++|.+|.+......-+
T Consensus 151 ~~~~-----d~~~l~~~~~~~-----~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~ 220 (382)
T PLN00144 151 VEYG-----NLEAARKLIQKG-----KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLW 220 (382)
T ss_pred eCCC-----CHHHHHHhcCCC-----CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHh
Confidence 3322 789999888421 24444444222332322 45 9999999999999999999998764322111
Q ss_pred hhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 345 RKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 345 ~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.....++ ..| .+.+-|.+..-+..|+
T Consensus 221 ~~~~~~~-~PD--i~t~sK~l~~G~pig~ 246 (382)
T PLN00144 221 AHEAYGV-EPD--IMTLAKPLAGGLPIGA 246 (382)
T ss_pred hhhhcCC-CCC--EEEecccccCCcceEE
Confidence 1112344 357 4455787764444444
No 321
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.06 E-value=0.0002 Score=74.45 Aligned_cols=164 Identities=13% Similarity=0.015 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
..+.++.+.|++.+.. -....|+.+||||+..|+..||....
T Consensus 139 ~~~~~lAe~l~~~~p~----------------------~~~v~f~~SGsEA~e~AlklAR~~tg---------------- 180 (474)
T PLN02482 139 LLENVLAEMVIDAVPS----------------------VEMVRFVNSGTEACMGVLRLARAYTG---------------- 180 (474)
T ss_pred HHHHHHHHHHHHhCCC----------------------CCEEEEeCChHHHHHHHHHHHHHhcC----------------
Confidence 3446777888887521 12478999999999999999997521
Q ss_pred CceEEEecCCCchHHHHHH-H-Hc-----------CC------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEE
Q psy1596 241 SRLVAYCSDQAHSSVEKAG-L-IG-----------LV------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG 301 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa-~-lg-----------~~------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~ 301 (375)
++.+|-....-|-...-.. . .. +. .+..+|.+ |+++|++.+++.. ..+.+|+.
T Consensus 181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~~---~~iAavI~ 252 (474)
T PLN02482 181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEANK---GEIAAVIL 252 (474)
T ss_pred CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHhCC---CceEEEEE
Confidence 1112323333333211100 0 00 00 12233322 7899999987532 22445555
Q ss_pred EcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 302 TLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 302 t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
.---.+.|.+-| +++|.++|++||+.+++|.++.|. ...........|+ ..|-+++ -|.++.-++.|++
T Consensus 253 Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav 325 (474)
T PLN02482 253 EPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAY 325 (474)
T ss_pred CCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEE
Confidence 544445566654 668999999999999999999765 3322221222355 4787666 7877654555543
No 322
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.06 E-value=0.00034 Score=71.52 Aligned_cols=152 Identities=12% Similarity=-0.015 Sum_probs=85.7
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~ 267 (375)
..+|+++|||||-.|+..||... + ++.+|.....-|-...-++.+.+ ..+.
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~t-g---------------r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~ 166 (421)
T PRK09792 103 KTAFFTTGAEAVENAVKIARAHT-G---------------RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVY 166 (421)
T ss_pred eEEEeCChHHHHHHHHHHHHHhc-C---------------CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcE
Confidence 47899999999999999999641 0 11233344444533332322211 1233
Q ss_pred EEec--CCCCCcC----HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-cc---HHHHHHHHHhcCCEEEEecccccC
Q psy1596 268 YIES--DDKLSLR----GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DN---LEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 268 ~Vp~--d~~g~md----~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dp---l~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
.+|. +..+ ++ .+.|++.+++... ...+.+|++.-...++|.+ -| +++|.++|++||+++++|..+.+.
T Consensus 167 ~v~~p~~~~~-~~~~~~~~~l~~~~~~~~~-~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~ 244 (421)
T PRK09792 167 HVPYPSDLHG-ISTQDSLDAIERLFKSDIE-AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGF 244 (421)
T ss_pred EcCCCccccc-ccHHHHHHHHHHHHHhccC-CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 3443 2222 22 4677777764211 1224456655544555643 24 999999999999999999999886
Q ss_pred cccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 338 SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 338 ~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.....-+.....++ ..|-+ ..-|.+..-+..|.
T Consensus 245 gr~G~~~a~~~~~~-~pDi~--t~gK~l~~G~piga 277 (421)
T PRK09792 245 ARTGKLFAMDHYAD-KPDLM--TMAKSLAGGMPLSG 277 (421)
T ss_pred CCCCchhHHHhcCC-CCcEE--EeehhhcCCCceEE
Confidence 43221111111132 45754 44788765444544
No 323
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.06 E-value=0.00052 Score=70.59 Aligned_cols=173 Identities=12% Similarity=-0.001 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
...++.+.|++++... ......|+++||+||-.|+..||... . +
T Consensus 100 ~~~~la~~l~~~~p~~--------------------~~~~v~f~~sGseA~e~AlklAr~~t-g---------------r 143 (443)
T PRK06058 100 GYVAVAEQLNRLTPGD--------------------HEKRSALFNSGAEAVENAVKIARSYT-G---------------R 143 (443)
T ss_pred HHHHHHHHHHHhCCCC--------------------CCCEEEEeCCcHHHHHHHHHHHHHhh-C---------------C
Confidence 3367788888876422 11257899999999999999998752 0 1
Q ss_pred ceEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCCC------cCH-HHHHHHHH---HhhhcCCccEE
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKLS------LRG-DKLIEAIE---RDKKKHLIPFF 298 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g~------md~-e~Le~aI~---~~~~~g~~p~~ 298 (375)
+.+|.....-|-...-++.+.+ ..+..+|....++ .+. +.+++.++ +... +..+.+
T Consensus 144 ~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~iAa 222 (443)
T PRK06058 144 QAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG-ADNLAA 222 (443)
T ss_pred CeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC-CCceEE
Confidence 2244444445555444443322 1223333211111 111 22222222 1111 122445
Q ss_pred EEEEcCCCCccccc----cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 299 VCGTLGTTGACAFD----NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 299 Vv~t~GtT~tGavD----pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
|++.-.....|.+- -+++|.++|++||+.+++|..+.|....-..+.....|+ ..|-+++. |.++.-++.|++
T Consensus 223 vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av 299 (443)
T PRK06058 223 VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAV 299 (443)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEE
Confidence 55443322334443 399999999999999999999987643222221222355 46888884 887654555543
No 324
>KOG0634|consensus
Probab=98.05 E-value=4.6e-05 Score=76.69 Aligned_cols=117 Identities=14% Similarity=0.022 Sum_probs=93.4
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG 279 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~ 279 (375)
...++|+|.|.+...++..+.++ +..|++.+.+..+...+++-.|++++.|+.|++| |++
T Consensus 125 wdiiit~G~t~~l~~~l~~~~N~-------------------gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~G-i~p 184 (472)
T KOG0634|consen 125 WDIIITNGNTDGLFKVLRTLINR-------------------GDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDG-IDP 184 (472)
T ss_pred ceEEEecCCchHHHHHHHHhhcC-------------------CCceEEecccchHHHHhccccCceEEeccccCCC-CCH
Confidence 46899999999999999888763 3579999999888888887666888888888877 999
Q ss_pred HHHHHHHHHhhhc--C-CccEEEEEEc--CCCCcccc---ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596 280 DKLIEAIERDKKK--H-LIPFFVCGTL--GTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 280 e~Le~aI~~~~~~--g-~~p~~Vv~t~--GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
|.|++.++..... + ..|. |..|. |.++||.. ..-++|.+|||+|++.++.|.-|..-
T Consensus 185 E~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L 249 (472)
T KOG0634|consen 185 ESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL 249 (472)
T ss_pred HHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence 9999999864432 1 2343 44444 66788865 66789999999999999999999774
No 325
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.05 E-value=0.00027 Score=72.17 Aligned_cols=168 Identities=11% Similarity=0.004 Sum_probs=96.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.++|+++.+.+ .....+|+++|++|+-.|+..||.... ++.
T Consensus 87 ~~la~~l~~~~~~~--------------------~~~~~~f~~sGsea~e~Alklar~~~~----------------r~~ 130 (425)
T PRK08088 87 LELCEKMNQKVPGD--------------------FAKKTLLVTTGSEAVENAVKIARAATK----------------RSG 130 (425)
T ss_pred HHHHHHHHHhCCCC--------------------CCCEEEEeCCcHHHHHHHHHHHHHHhC----------------CCe
Confidence 57778888876543 113578999999999999999987420 123
Q ss_pred EEEecCCCchHHHHHHHHcCC-------------eEEE--EecCCCCCcC----HHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLV-------------KMRY--IESDDKLSLR----GDKLIEAIERDKKKHLIPFFVCGTLG 304 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~-------------~v~~--Vp~d~~g~md----~e~Le~aI~~~~~~g~~p~~Vv~t~G 304 (375)
+|.++..-|-+..-+..+++. .+.. +|.+.++ ++ +++|+++++... .+..+.+|+..-.
T Consensus 131 iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi 208 (425)
T PRK08088 131 VIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDA-APEDIAAIIIEPV 208 (425)
T ss_pred EEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhcc-CCCceEEEEECcc
Confidence 555566666655554444321 0111 2322221 23 456888775321 1223445554443
Q ss_pred CCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhh-hhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 305 TTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFR-KWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 305 tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~-~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
....|.+ +.+++|.++|++||+++++|.+|++.... .... ....++ ..|- .++-|.+..-+..|.
T Consensus 209 ~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~ 278 (425)
T PRK08088 209 QGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAG 278 (425)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCccee
Confidence 3344544 44999999999999999999999974321 1111 001232 2453 455788764444444
No 326
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.01 E-value=0.00021 Score=72.36 Aligned_cols=133 Identities=15% Similarity=0.104 Sum_probs=99.8
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH-H---HcCCeEEEEecCCCCC
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG-L---IGLVKMRYIESDDKLS 276 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa-~---lg~~~v~~Vp~d~~g~ 276 (375)
.++.+++|..|+..++++... +++.|++++..+....+-+ . -.++++..+..
T Consensus 80 ~~~afsSGmaAI~~~~l~ll~-------------------~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~----- 135 (396)
T COG0626 80 DAFAFSSGMAAISTALLALLK-------------------AGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP----- 135 (396)
T ss_pred cEEEecCcHHHHHHHHHHhcC-------------------CCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC-----
Confidence 478899998888887665432 2457888887776665544 2 25667776654
Q ss_pred cCHHHHHHHHHH-hhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596 277 LRGDKLIEAIER-DKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN 355 (375)
Q Consensus 277 md~e~Le~aI~~-~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD 355 (375)
.|.+++++++.+ . +.+|..-.++|++..+-||++|+++|+++|+.+.||..|+.+.+.-| +..| ||
T Consensus 136 ~~~~~~~~~~~~~~------tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~P----L~~G---aD 202 (396)
T COG0626 136 GDDEALEAAIKEPN------TKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRP----LELG---AD 202 (396)
T ss_pred CChHHHHHHhcccC------ceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccCh----hhcC---CC
Confidence 355667777664 3 45899999999999999999999999999999999999999865432 2233 79
Q ss_pred EEEEcCcccCCCCCc
Q psy1596 356 SIAFNPSKWLMVHFD 370 (375)
Q Consensus 356 Si~~d~HK~l~~P~~ 370 (375)
-+.=+.-|.++.--+
T Consensus 203 IVvhSaTKyl~GHsD 217 (396)
T COG0626 203 IVVHSATKYLGGHSD 217 (396)
T ss_pred EEEEeccccccCCcc
Confidence 999999999876543
No 327
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.00 E-value=0.00034 Score=71.28 Aligned_cols=149 Identities=15% Similarity=0.136 Sum_probs=83.4
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce-EEEecCCCchHHHHHHHHcCC------------eEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL-VAYCSDQAHSSVEKAGLIGLV------------KMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~-vV~~S~~aH~Sv~kaa~lg~~------------~v~ 267 (375)
...|+++|||||-.|+..||.....+ + + + ..+. ++.....-|-...-++.+.+. .++
T Consensus 100 ~v~f~~sGseA~e~AlklAr~~~~~~-g-~-~-------~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 169 (408)
T PRK04612 100 KVFLCNSGTEANEAAIKLVRKWASSQ-G-R-P-------ADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFR 169 (408)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHHhh-C-C-C-------CCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCce
Confidence 57999999999999999999764211 0 0 0 0122 344444445444434333221 112
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-c----cHHHHHHHHHhcCCEEEEecccccCcccch
Q psy1596 268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-D----NLEELGPICEKEGLWLHVDAAYAGSSFICP 342 (375)
Q Consensus 268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-D----pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~ 342 (375)
.+|. -|+++|+++++.. .+ ..+...+...+|.+ . -+++|.++|++||+++++|.+|.+....-.
T Consensus 170 ~~~~-----~d~~~l~~~~~~~-----~~-aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 238 (408)
T PRK04612 170 YVDF-----NDVEALEAAMAGG-----DV-AAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT 238 (408)
T ss_pred EcCC-----CCHHHHHHhhCCC-----CE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc
Confidence 2222 2788999888421 23 34444444445543 2 399999999999999999999987433111
Q ss_pred hhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 343 EFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 343 ~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
-+.....++ ..|.+++ -|.++.-+..|.
T Consensus 239 ~~a~~~~~~-~pdi~t~--~K~l~~G~piga 266 (408)
T PRK04612 239 LFAHWQEQV-TPDIVTL--AKALGGGFPIGA 266 (408)
T ss_pred hhhhhhcCC-CCCEEEE--cchhcCCCceEE
Confidence 111111122 2455555 677654333443
No 328
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.00 E-value=0.00065 Score=69.80 Aligned_cols=151 Identities=13% Similarity=-0.022 Sum_probs=98.8
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeE
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKM 266 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v 266 (375)
.-.+|+.+||+||=.|+..||.... +..+|-....-|-...-++.+.+ ..+
T Consensus 118 ~~~~f~~sGaeA~E~AiKiAr~~Tg----------------r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v 181 (447)
T COG0160 118 KKVFFGNSGAEAVEAAIKIARAYTG----------------RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGV 181 (447)
T ss_pred CeEEecCCcHHHHHHHHHHHHHHhC----------------CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCe
Confidence 3478999999999999999998641 12244445555655555543321 136
Q ss_pred EEEecCCCC------------CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc----cHHHHHHHHHhcCCEEEE
Q psy1596 267 RYIESDDKL------------SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD----NLEELGPICEKEGLWLHV 330 (375)
Q Consensus 267 ~~Vp~d~~g------------~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD----pl~eI~~ia~~~~iwlHV 330 (375)
..+|-...+ .-..+.++++|......+..|.++++---..+.|.+. =++++.++|++||+.|++
T Consensus 182 ~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~ 261 (447)
T COG0160 182 YHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIA 261 (447)
T ss_pred EEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 777753222 2234556666666555555677788776666777764 389999999999999999
Q ss_pred ecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596 331 DAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 331 DaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~ 369 (375)
|..+.|....-.-+..-..|+ ..|-||++ |-++.-+
T Consensus 262 DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~ 297 (447)
T COG0160 262 DEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGL 297 (447)
T ss_pred eccccCCCccccchhhhhcCC-CCCEEEec--ccccCCC
Confidence 999999765443333334465 57888875 5444433
No 329
>PLN02452 phosphoserine transaminase
Probab=97.99 E-value=0.00017 Score=72.46 Aligned_cols=152 Identities=14% Similarity=-0.046 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
-+++.+.|.++++.|. +..-.+++.|||.+.-.+++..... .+
T Consensus 54 ~~~~~~~L~~l~~~p~-------------------~y~v~~l~Gsgt~~~ea~~~nl~~~------------------~~ 96 (365)
T PLN02452 54 IQKAEADLRELLDIPD-------------------NYEVLFLQGGASTQFAAIPLNLCKP------------------GD 96 (365)
T ss_pred HHHHHHHHHHHhCCCC-------------------CceEEEEeCccHHHHHHHHHhcCCC------------------CC
Confidence 3788999999999982 2122455577777765555443210 01
Q ss_pred eEEEecCCCchH---HHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-cccHHH
Q psy1596 243 LVAYCSDQAHSS---VEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-FDNLEE 316 (375)
Q Consensus 243 ~vV~~S~~aH~S---v~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-vDpl~e 316 (375)
.+.|+. ...++ ...|.+++...++....+.+ ...+++++ +.+. .+..|..|...|.+|. +.|+++
T Consensus 97 ~~l~~~-~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~v~~~hnETstGv~~~~~~~ 167 (365)
T PLN02452 97 KADFVV-TGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELTP----DAKFVHICANETIHGVEFKDYPD 167 (365)
T ss_pred eEEEEE-CCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCCC----CCcEEEECCCCCCCcEecCcccc
Confidence 133332 33333 33344566533333211111 13566654 2111 2458999999999999 588888
Q ss_pred HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
+.+ +.+.||++.+.+....+- . ..|.+..+.||.++ |.|.|+++
T Consensus 168 i~~------~~lvVDa~Ss~g~~pidv-~-------~~~v~~~saqK~lG-P~Gl~~v~ 211 (365)
T PLN02452 168 VGN------VPLVADMSSNFLSKPVDV-S-------KYGVIYAGAQKNVG-PSGVTIVI 211 (365)
T ss_pred cCC------CeEEEECCccccCcccCH-H-------HcCEEEEecccccC-CCCeEEEE
Confidence 753 799999999888754321 1 12334479999875 99999874
No 330
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=97.96 E-value=0.00054 Score=70.02 Aligned_cols=153 Identities=14% Similarity=-0.014 Sum_probs=83.2
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC-------------eEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV-------------KMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~-------------~v~ 267 (375)
...|+++|||||-.|+..||.... ++.+|-....-|-...-++.+.+. .+.
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~ 166 (421)
T PRK06777 103 KTAFFTTGAEAVENAVKIARAYTG----------------RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIF 166 (421)
T ss_pred eEEEeCCcHHHHHHHHHHHHHhhC----------------CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcE
Confidence 578999999999999999987521 112333444445443333333221 122
Q ss_pred EEecCCCC-----CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-c---ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 268 YIESDDKL-----SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-F---DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 268 ~Vp~d~~g-----~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-v---Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
.+|..+.. .-+++.|++.+++.. .+..+.+|+..-.....|. + +-+++|.++|++||+++++|.+|.+..
T Consensus 167 ~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK06777 167 HALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFA 245 (421)
T ss_pred EcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCc
Confidence 23321111 123567788775421 1112344444433333443 2 449999999999999999999998753
Q ss_pred ccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 339 FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 339 ~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
..-.-+.....++ ..|.++ .-|.+..-+..|.
T Consensus 246 r~g~~~~~~~~~~-~pDiv~--~sK~l~~G~piga 277 (421)
T PRK06777 246 RTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISA 277 (421)
T ss_pred cCCchhhhhhcCC-CCCEEe--eehhhcCCCceEE
Confidence 3211111111233 357554 5787653344443
No 331
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=97.95 E-value=0.00077 Score=69.05 Aligned_cols=153 Identities=14% Similarity=0.020 Sum_probs=82.4
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~ 267 (375)
...|+++|||||-.|+..||.... ++.++.....-|-...-+..+.+ ..+.
T Consensus 103 ~v~f~~SGseA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (425)
T PRK07495 103 KTIFVTTGAEAVENAVKIARAATG----------------RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVY 166 (425)
T ss_pred EEEECCchHHHHHHHHHHHHHhhC----------------CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeE
Confidence 579999999999999999987420 11234344444533322222211 1234
Q ss_pred EEecCC-CCCcC----HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 268 YIESDD-KLSLR----GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 268 ~Vp~d~-~g~md----~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
.+|... ...++ .++|++.+++... +..+.+|++.-.....|.+ +-+++|.++|++||+++++|.+|.+..
T Consensus 167 ~~~~~~~~~g~~~~~~~~~l~~~~~~~~~-~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g 245 (425)
T PRK07495 167 HVPFPVELHGVSVEQSLAALDKLFKADVD-PQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFA 245 (425)
T ss_pred EecCCcccccccHHHHHHHHHHHHHhccC-CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCC
Confidence 455422 11133 3445666643111 1224445544333334533 459999999999999999999998753
Q ss_pred ccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 339 FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 339 ~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
..-.-+.....++ ..|-+++ -|.++.-+..|+
T Consensus 246 r~G~~~a~~~~gv-~pDi~tl--sK~l~~G~piga 277 (425)
T PRK07495 246 RTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAA 277 (425)
T ss_pred cCCCceeecccCC-CCCEEee--hhhhcCCccceE
Confidence 2211000111133 3565555 677654444444
No 332
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.95 E-value=6.6e-06 Score=81.81 Aligned_cols=106 Identities=16% Similarity=0.090 Sum_probs=34.2
Q ss_pred HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC-----ccccccHHHHHHHHHhcCCEEEEe
Q psy1596 257 KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG-----ACAFDNLEELGPICEKEGLWLHVD 331 (375)
Q Consensus 257 kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~-----tGavDpl~eI~~ia~~~~iwlHVD 331 (375)
..++.+|.+++.|-+. .+-.+++.+++|.++++ ++.-...|+. ++. -+++++++++++|++++++|
T Consensus 106 ~vm~~sGa~lvEVGtt--N~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~-~~~~el~~la~~~~lp~i~D 176 (367)
T PF03841_consen 106 DVMRQSGARLVEVGTT--NRTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGE-VSLEELAELAKEHGLPVIVD 176 (367)
T ss_dssp ----------------------------------------------------------------HHHHHHHHHT--EEEE
T ss_pred cccccccccccccccc--ccccccccccccccccc------cccccccccccccccccc-ccHHHHHHHHhhcCCcEEEE
Confidence 3345677888877654 35677889999998765 4444444443 233 37999999999999999999
Q ss_pred cccccCccc-------chhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 332 AAYAGSSFI-------CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 332 aA~gg~~~~-------~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
.+-|...-+ -|..+..++ ..+|-++||+.|.++.|. +|++
T Consensus 177 lgsG~l~dl~~~gl~~Ep~v~~~~~--~GaDlV~fSGdKlLGGPQ-aGiI 223 (367)
T PF03841_consen 177 LGSGLLVDLSPYGLPDEPTVQEYLA--AGADLVTFSGDKLLGGPQ-AGII 223 (367)
T ss_dssp -TTHHHHHHHTT----------CCC--CT-SEEEEETTSSSSS-S--EEE
T ss_pred CCCCCCcCcccccCccccHHHHHhh--cCCCEEEEECCCcCCCCC-eEEE
Confidence 866543211 122222111 358999999999999998 6875
No 333
>PRK07481 hypothetical protein; Provisional
Probab=97.95 E-value=0.0011 Score=68.43 Aligned_cols=172 Identities=12% Similarity=0.005 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+.++.+.|.++++-+ .-....|+++||||+-.|+..||.....+ +. + .++
T Consensus 88 ~~~lae~L~~~~~~~--------------------~~~~v~f~~sGsEAve~AlklAr~~~~~~-g~--~-------~r~ 137 (449)
T PRK07481 88 AIELSYELIDMFAPE--------------------GMRRVFFSSGGSDSVETALKLARQYWKVR-GQ--P-------ERT 137 (449)
T ss_pred HHHHHHHHHHhcCCC--------------------CCCEEEEcCchHHHHHHHHHHHHHHHHhc-CC--C-------CCc
Confidence 367788888876422 11357899999999999999999754211 00 0 012
Q ss_pred eEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCC-----cCHHHHHHHHHHh----h--hcCCccEEE
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLS-----LRGDKLIEAIERD----K--KKHLIPFFV 299 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~-----md~e~Le~aI~~~----~--~~g~~p~~V 299 (375)
.+|.....-|-...-++.+.+ ..+..++.....+ -|++++++.+.+. . ..+..+.+|
T Consensus 138 ~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAv 217 (449)
T PRK07481 138 KFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAF 217 (449)
T ss_pred EEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 234444444543332222211 1123333221111 2455544333211 1 112234555
Q ss_pred EEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 300 CGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 300 v~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
++.--....|.+-+ +++|.++|++||+.++.|..+.|....-.-+.....|+ ..|.+++ -|.+..
T Consensus 218 iiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~g 286 (449)
T PRK07481 218 IAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITS 286 (449)
T ss_pred EEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccC
Confidence 55544344455433 99999999999999999999887643322111222355 4788887 676553
No 334
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.94 E-value=0.00025 Score=72.84 Aligned_cols=162 Identities=10% Similarity=-0.071 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+.++.+.|.++++.. .....|+.+||||+-.|+..||.... ++
T Consensus 95 ~~~la~~L~~~~~~~---------------------~~~v~f~~SGsEA~e~AiklAr~~tg----------------r~ 137 (433)
T PRK00615 95 EILFAEELFSYLGLE---------------------DHKIRFVSSGTEATMTAVRLARGITG----------------RS 137 (433)
T ss_pred HHHHHHHHHHhCCCC---------------------cCEEEEeCchHHHHHHHHHHHHHhhC----------------CC
Confidence 367778888876432 13579999999999999999997521 11
Q ss_pred eEEEecCCCchHH---HHHHHHcCC----------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc
Q psy1596 243 LVAYCSDQAHSSV---EKAGLIGLV----------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL 303 (375)
Q Consensus 243 ~vV~~S~~aH~Sv---~kaa~lg~~----------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~ 303 (375)
.++-....-|-.. ..+..+.+. ....+|. -|+++|++.+++.. ..+.+|+..-
T Consensus 138 ~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~---~~~aavI~Ep 209 (433)
T PRK00615 138 IIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-----NDFQIFQTVMNSLG---HRVAGVIFEP 209 (433)
T ss_pred EEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-----CCHHHHHHHHHhcC---CceEEEEECC
Confidence 1333333333321 111111110 0111111 27899999987532 2244555554
Q ss_pred CCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 304 GTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 304 GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
...+.|.+-| +++|.++|++||+.+++|.++.|. ..-........++ ..|.++ .-|.++.-++.|+
T Consensus 210 v~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~--~gK~lggG~p~~a 279 (433)
T PRK00615 210 ICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITV--YGKILGGGLPAAA 279 (433)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEE--EcccccCCcceee
Confidence 4455576655 569999999999999999999654 3222221222355 478776 4787764343443
No 335
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=97.91 E-value=0.00079 Score=69.27 Aligned_cols=152 Identities=13% Similarity=0.009 Sum_probs=83.1
Q ss_pred EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEEEe
Q psy1596 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRYIE 270 (375)
Q Consensus 203 vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp 270 (375)
+++++|||||-.|+..||.... ++.+|.....-|-...-+..+.+ ..+..+|
T Consensus 106 f~~~sGsEA~e~AlklAr~~tg----------------r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~ 169 (442)
T TIGR00709 106 FPGPSGADAVEAAIKLAKTYTG----------------RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMP 169 (442)
T ss_pred EeCCCHHHHHHHHHHHHHHhcC----------------CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeC
Confidence 4458999999999999997520 12245555555655444443322 1233444
Q ss_pred cCCCCCc--------CHHH----HHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEeccc
Q psy1596 271 SDDKLSL--------RGDK----LIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAY 334 (375)
Q Consensus 271 ~d~~g~m--------d~e~----Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~ 334 (375)
..+..+. +.+. +++.++........+.+|++.-.....|.+ +-+++|.++|++||++++.|..+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~ 249 (442)
T TIGR00709 170 YPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ 249 (442)
T ss_pred CCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 3222222 2233 333332111111123444444333334443 45999999999999999999999
Q ss_pred ccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 335 AGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 335 gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.|....-.-+.....|+ ..|.+++ -|.++.-++.|+
T Consensus 250 tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Piga 285 (442)
T TIGR00709 250 AGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAV 285 (442)
T ss_pred cCCCCCCchhHHHHcCC-CCcEEEE--cccccCCcccEE
Confidence 87644322122112355 4788885 676654444444
No 336
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=97.90 E-value=0.0011 Score=68.44 Aligned_cols=150 Identities=17% Similarity=0.110 Sum_probs=84.2
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce-EEEecCCCchHHHHHHHHcC------------CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL-VAYCSDQAHSSVEKAGLIGL------------VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~-vV~~S~~aH~Sv~kaa~lg~------------~~v~ 267 (375)
...|+++|||||-.|+..||.....+ +. ..+. +|.....-|-...-++.+.+ ..+.
T Consensus 108 ~v~f~~sGseA~e~AlklAr~~~~~~-g~----------~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~ 176 (442)
T PRK13360 108 HVFFTNSGSESVDTALKIALAYHRAR-GE----------GSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVD 176 (442)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhc-CC----------CCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCE
Confidence 47899999999999999999753211 00 0122 33334444433222222211 1223
Q ss_pred EEecCCC-CC--c----------CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEE
Q psy1596 268 YIESDDK-LS--L----------RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHV 330 (375)
Q Consensus 268 ~Vp~d~~-g~--m----------d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHV 330 (375)
.+|...+ .+ . ..++|+++++... +..+.+|++---..+.|.+-| +++|.++|++||+.+++
T Consensus 177 ~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~ 254 (442)
T PRK13360 177 HLPHTLDLARNAFSKGQPEHGAELADELERLVTLHD--ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIF 254 (442)
T ss_pred EeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3443211 00 1 2467888876321 123445555544455677777 99999999999999999
Q ss_pred ecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 331 DAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 331 DaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
|.++.|....-.-+.....|+ ..|.+++ -|.++
T Consensus 255 DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~ 287 (442)
T PRK13360 255 DEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLT 287 (442)
T ss_pred echhhCCCCCccchhhhhcCC-CCceeee--eeccc
Confidence 999955422221111112355 3687655 78764
No 337
>PRK06149 hypothetical protein; Provisional
Probab=97.90 E-value=0.00052 Score=77.24 Aligned_cols=154 Identities=12% Similarity=-0.006 Sum_probs=88.7
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc-----------C--CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG-----------L--VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg-----------~--~~v~ 267 (375)
...|+++|||||-.|+..||.... ++.+|.....-|-...-+..+. . ..+.
T Consensus 643 ~v~f~~SGsEA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~ 706 (972)
T PRK06149 643 TVFLVNSGSEANDLAIRLAWAASG----------------RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVH 706 (972)
T ss_pred EEEEeCCchHHHHHHHHHHHHhcC----------------CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeE
Confidence 479999999999999999987520 1234555555563222221110 0 1133
Q ss_pred EEecCCCCC--c---C-----HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecc
Q psy1596 268 YIESDDKLS--L---R-----GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAA 333 (375)
Q Consensus 268 ~Vp~d~~g~--m---d-----~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA 333 (375)
.++..+.++ . + .+++++.++...+.+..+.+|++.---...|.+-+ +++|.++|++||+.+++|.+
T Consensus 707 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV 786 (972)
T PRK06149 707 PVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEV 786 (972)
T ss_pred EeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEee
Confidence 343322111 1 2 35666666543333444555655543345577766 99999999999999999999
Q ss_pred cccCcccchhh-hhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 334 YAGSSFICPEF-RKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 334 ~gg~~~~~~~~-~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+.|....-..+ .....|+ ..|-+++ -|.++.-++.|+
T Consensus 787 ~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~a 824 (972)
T PRK06149 787 QVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGA 824 (972)
T ss_pred hhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEE
Confidence 95543322111 1111355 4788866 677664344444
No 338
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=97.89 E-value=0.00064 Score=70.39 Aligned_cols=164 Identities=15% Similarity=0.058 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
+.+.++.+.|+++++-+ .....|++|||+|+-.|+..||... .
T Consensus 113 ~~~~~lae~L~~~~p~~---------------------~~~v~f~~sGseAve~AlklAr~~t-g--------------- 155 (459)
T PRK06082 113 ETAIECAEKLTEIAGGE---------------------LNRVLFAPGGTSAIGMALKLARHIT-G--------------- 155 (459)
T ss_pred HHHHHHHHHHHHhCCCC---------------------CCEEEECCCcHHHHHHHHHHHHHhc-C---------------
Confidence 34467788888876422 1357999999999999999998641 0
Q ss_pred CceEEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCC-----cC------HHHHHHHHHHhhhcCCccE
Q psy1596 241 SRLVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLS-----LR------GDKLIEAIERDKKKHLIPF 297 (375)
Q Consensus 241 ~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~-----md------~e~Le~aI~~~~~~g~~p~ 297 (375)
++.+|.....-|-...-++.+.+. .+..+|.....+ .| ++.|++.|++. + ...
T Consensus 156 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---~-~vA 231 (459)
T PRK06082 156 NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE---G-GIG 231 (459)
T ss_pred CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC---C-CEE
Confidence 122455555566555445444321 123344211111 11 35577777531 2 233
Q ss_pred EEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 298 FVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 298 ~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
+|++.-.....+.+-| +++|.++|++||+.+++|.++.|....-.-+.....|+ ..|.++ .-|.++.-
T Consensus 232 avIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG 302 (459)
T PRK06082 232 AFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLGGG 302 (459)
T ss_pred EEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--ecccccCC
Confidence 4444332222122333 99999999999999999999987543322222222365 578887 47876643
No 339
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=97.86 E-value=0.0013 Score=67.75 Aligned_cols=150 Identities=19% Similarity=0.113 Sum_probs=83.1
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~ 268 (375)
...|+++|||||-.|+..||.....+ +. + .+.-+|.....-|-...-+..+.+ ..+..
T Consensus 111 ~v~f~~sGseAve~AlklAr~~~~~~-g~--~-------~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~ 180 (445)
T PRK09221 111 HVFFTNSGSESVDTALKIALAYHRAR-GQ--G-------TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDH 180 (445)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeE
Confidence 47899999999999999999754211 00 0 011234444444533222222211 11233
Q ss_pred EecCC---C--CC--------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596 269 IESDD---K--LS--------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD 331 (375)
Q Consensus 269 Vp~d~---~--g~--------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD 331 (375)
+|... . +. -..++|++.++.... ..+.+|++.-.....|.+-| +++|.++|++||+.+++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D 258 (445)
T PRK09221 181 LPHTLDLPENAFSKGQPEHGAELADDLERLVALHDA--STIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFD 258 (445)
T ss_pred eCCCccccccccCCChHHHHHHHHHHHHHHHHhcCC--CcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 33211 0 00 113577777764211 23456666655556688777 999999999999999999
Q ss_pred cccccCcccchhhhhhhcCCCcccEEEEcCcccC
Q psy1596 332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWL 365 (375)
Q Consensus 332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l 365 (375)
.++.|....-.-+.....++ ..|.+++ -|.+
T Consensus 259 EV~tG~GRtG~~~~~~~~gv-~PDi~~~--gK~l 289 (445)
T PRK09221 259 EVITGFGRLGAAFAAERFGV-TPDIITF--AKGL 289 (445)
T ss_pred ehhhCCCcCchhhHHHhcCC-CCCEEEe--cccc
Confidence 99966432211111112344 3586665 4554
No 340
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=97.83 E-value=0.002 Score=66.73 Aligned_cols=153 Identities=13% Similarity=0.055 Sum_probs=85.1
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC-------------CeE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL-------------VKM 266 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~-------------~~v 266 (375)
...|+.+|||||-.|+..||... .+..|+ ....-|-...-+..+.+ ..+
T Consensus 115 ~v~f~~SGsEA~e~AlklAr~~t-----------------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~ 177 (457)
T PRK05639 115 KVLFGLSGSDAVDMAIKVSKFST-----------------RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNV 177 (457)
T ss_pred EEEEeCchHHHHHHHHHHHHHhc-----------------CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCc
Confidence 57999999999999999999642 122343 34444544433333321 124
Q ss_pred EEEecCCCCC--------cCHH--------HHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCC
Q psy1596 267 RYIESDDKLS--------LRGD--------KLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGL 326 (375)
Q Consensus 267 ~~Vp~d~~g~--------md~e--------~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~i 326 (375)
..+|..+..+ -|.+ .|++.|......+....+|++.--....|.+ +=+++|.++|++||+
T Consensus 178 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~ 257 (457)
T PRK05639 178 VWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGI 257 (457)
T ss_pred eEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 4555432111 1233 3444332211112234455554333334544 349999999999999
Q ss_pred EEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 327 WLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 327 wlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.+++|.++.|....-.-+.....|+ ..|-+++ -|.++.-++.|+
T Consensus 258 llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~a 301 (457)
T PRK05639 258 LLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSG 301 (457)
T ss_pred EEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCccee
Confidence 9999999987533222112222366 4798884 788764455443
No 341
>PRK06105 aminotransferase; Provisional
Probab=97.82 E-value=0.0015 Score=67.75 Aligned_cols=168 Identities=11% Similarity=0.026 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+.++.+.|++++.-+ -....|+.+|||||-.|+..||.....+ +. . .++
T Consensus 94 ~~~lae~L~~~~p~~---------------------~~~v~f~~SGseAve~AlKlar~~~~~~-g~--t-------~r~ 142 (460)
T PRK06105 94 VIDLAEKLVAMAPVP---------------------MSKVFFTNSGSEANDTVVKLVWYYNNAL-GR--P-------EKK 142 (460)
T ss_pred HHHHHHHHHHhCCCC---------------------CCEEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCc
Confidence 366778888876322 1347899999999999999998643111 00 0 012
Q ss_pred eEEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCc-------------CHHHHHHHHHHhhhcCCccE
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSL-------------RGDKLIEAIERDKKKHLIPF 297 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~m-------------d~e~Le~aI~~~~~~g~~p~ 297 (375)
.+|.....-|-...-+..+.+. .+..+|.....+. ..++|+++|.... ...+.
T Consensus 143 ~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iA 220 (460)
T PRK06105 143 KIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEG--PDTIA 220 (460)
T ss_pred EEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcC--CCceE
Confidence 3444455556554444333221 1223332111111 2356777775321 12344
Q ss_pred EEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 298 FVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 298 ~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
+|++---....|.+-+ +++|.++|++||+.+++|.++.|....-.-+.....++ ..|.+++ -|.++
T Consensus 221 avIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~--gK~lg 290 (460)
T PRK06105 221 AFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVM--SKQLS 290 (460)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeee--ecccc
Confidence 5555543444566655 99999999999999999999966533322222222355 3787766 56654
No 342
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=97.81 E-value=9e-05 Score=72.39 Aligned_cols=161 Identities=14% Similarity=0.003 Sum_probs=107.3
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~ 238 (375)
...+-+.+.+.|+.++|... +-+...++|..|+.-++.+--+.
T Consensus 74 W~~lp~~lgdklApLiGA~~----------------------~Evvv~dtts~nl~k~L~aalr~--------------- 116 (407)
T COG3844 74 WFDLPERLGDKLAPLIGARA----------------------GEVVVTDTTSINLFKVLAAALRP--------------- 116 (407)
T ss_pred hhhchhHHHHHhhhhhcCCC----------------------CceEEeCCcchHHHHHHHHHhcc---------------
Confidence 33444788899999999862 22555666667776555543221
Q ss_pred hcCceEEEecCCCc-hHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 239 INSRLVAYCSDQAH-SSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 239 ~~~~~vV~~S~~aH-~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
..+..|++|+-.- .+=...+. +..++..+-.+-.+.+.|+++++++..+.+ +|+.+..+.-||..-++.+|
T Consensus 117 -~~~r~vIv~E~~~fpTdly~a~-g~~~~~~~~~~~~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~ai 188 (407)
T COG3844 117 -QEGRRVIVSEGDNFPTDLYIAE-GLADLLGIGYDLEGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAI 188 (407)
T ss_pred -CCCceEEeecCCCCCcchhhhc-chhhhhcccccceeeeChHHHHHhhccceE------EEEeccccccccceeeHHHH
Confidence 1122455665443 22222221 111112222344566788999999998854 78888888889999999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~ 370 (375)
..+++++|+.+.=|=||+++++...- .. ..||+-+.+.||+|..-.|
T Consensus 189 T~~AH~~galv~wDLAHsaGavp~~L-----h~-~gaDfaigcsyKYLNgGPG 235 (407)
T COG3844 189 TALAHQHGALVGWDLAHSAGAVPVDL-----HA-AGADFAIGCSYKYLNGGPG 235 (407)
T ss_pred HHHHHhcCceEEeehhcccCCcceee-----cc-cCCCeeeeeeceeccCCCC
Confidence 99999999999999999999865421 11 2579999999999875443
No 343
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=97.79 E-value=0.00016 Score=72.86 Aligned_cols=153 Identities=10% Similarity=-0.111 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596 162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241 (375)
Q Consensus 162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~ 241 (375)
+-.++.+.|.++|+.|. +..-.++++|||.+.=.++...... +
T Consensus 40 i~~e~~~~L~~l~~~~~-------------------~~~v~~l~GsGT~a~Eaa~~nl~~~------------------~ 82 (374)
T TIGR01365 40 KLAEAIKKTREMLGVPA-------------------DYLIGIVPASDTGAVEMALWSMLGC------------------R 82 (374)
T ss_pred HHHHHHHHHHHHhCCCC-------------------CcEEEEECCchHHHHHHHHHHcCCC------------------C
Confidence 34788999999999872 2223566888888766655543210 1
Q ss_pred ceEEEecCCCchHHH---HHHHHcCC-eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596 242 RLVAYCSDQAHSSVE---KAGLIGLV-KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~---kaa~lg~~-~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI 317 (375)
+..+++.. .++-. +.++..+. ++..+..+-.-.+|+++++. . + .|++|+.-|.||...|+++|
T Consensus 83 g~~vLv~g--~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~----~-~------~v~~vhnETSTGv~npv~~i 149 (374)
T TIGR01365 83 GVDVLAWE--SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF----K-N------DVVFTWNGTTSGVRVPNGDF 149 (374)
T ss_pred CCeEEEEC--HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC----C-C------CEEEecCCCchheecccccc
Confidence 22333332 33333 44444455 46777665555689998872 1 1 26789999999999999877
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
++.+ ++..+.||+.=+.++...+ ++ .+|.+..+..|.|+.|-|.|++
T Consensus 150 ~~~~--~~~lliVDavSs~g~~~l~-----~d---~iDv~~tgsQK~L~~ppGls~v 196 (374)
T TIGR01365 150 IPAD--REGLTICDATSAAFAQDLD-----YH---KLDVVTFSWQKVLGGEGAHGML 196 (374)
T ss_pred cccc--CCCcEEEEccchhcCCCCC-----hh---HCcEEEEechhccCCCCceEEE
Confidence 6432 4899999998777655332 12 2699999999999999999876
No 344
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.78 E-value=0.00096 Score=67.36 Aligned_cols=179 Identities=15% Similarity=0.070 Sum_probs=113.9
Q ss_pred cccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCch
Q psy1596 107 TTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLD 186 (375)
Q Consensus 107 ~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~ 186 (375)
-||+|.| .|.|||..|-.+ .|+.+.--+....+++|.|++..
T Consensus 97 ile~pew----yTaYTPYQpEIS---------------------------QGrLqaLfefQtlv~dLTGm~VA------- 138 (450)
T COG0403 97 ILENPEW----YTAYTPYQPEIS---------------------------QGRLEALFEFQTLVADLTGLDVA------- 138 (450)
T ss_pred hhcCccc----cccCCCCchhhh---------------------------hHHHHHHHHHHHHHHHHhCCCcc-------
Confidence 4889988 788888766544 33333335566789999999842
Q ss_pred hhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHH--H--c
Q psy1596 187 KELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL--I--G 262 (375)
Q Consensus 187 ~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~--l--g 262 (375)
+.-+--+||.+ -.|+..++.... .++-.+++++..|......++ . .
T Consensus 139 --------------NASm~DeaTAa-AEAm~ma~r~~k---------------~k~~~~~V~~~vhpqt~~Vl~Tra~~~ 188 (450)
T COG0403 139 --------------NASMLDEATAA-AEAMLMAKRVTK---------------KKRNKFLVPKDVHPQTLDVLRTRAEGL 188 (450)
T ss_pred --------------cchhhhhHHHH-HHHHHHHHHhhc---------------CcCceEEecCCCCHHHHHHHHhhcccC
Confidence 12233344433 233333322110 013479999999999988875 2 3
Q ss_pred CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecc-cccCcccc
Q psy1596 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAA-YAGSSFIC 341 (375)
Q Consensus 263 ~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA-~gg~~~~~ 341 (375)
|.++..++.+ |.++|+++ +. . -.+.|++..+++.-+.+.++.+|.+.+++++..+.|=+= .+.+.+-.
T Consensus 189 g~~i~~~~~~-----d~~~l~~~-~~-~----~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~p 257 (450)
T COG0403 189 GIEIEVVDAD-----DLDDLESA-DD-G----DVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKP 257 (450)
T ss_pred ceEEEEeccc-----hhhhhhhc-cc-c----CeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCC
Confidence 4666666665 78888887 32 1 156899999975444788899999999999987665331 22222212
Q ss_pred hhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 342 PEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 342 ~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
| |=-.||-+.=|..-+ ++|++=|
T Consensus 258 P-------Ge~GADIvvG~~Qrf-GvPmgfG 280 (450)
T COG0403 258 P-------GEFGADIVVGSAQRF-GVPMGFG 280 (450)
T ss_pred c-------cccCCceEEecCccc-CCCcCCC
Confidence 2 112489999999985 6788765
No 345
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=97.77 E-value=0.00067 Score=69.57 Aligned_cols=138 Identities=17% Similarity=0.078 Sum_probs=76.2
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEec-CCCchHHHHHH----HHc-CC------eEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCS-DQAHSSVEKAG----LIG-LV------KMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S-~~aH~Sv~kaa----~lg-~~------~v~~ 268 (375)
...|+++|||||-.|+..||.... +..|+.. ...+.+..... ... +. .+..
T Consensus 106 ~v~f~~sGseA~e~AlklAr~~tg-----------------r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~ 168 (431)
T PRK06209 106 MVKFCKNGSDATSAAVRLARAYTG-----------------RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVT 168 (431)
T ss_pred eEEEecCHHHHHHHHHHHHHHHhC-----------------CCeEEEeccCccccccccccccCCCCCCCChhHhccccc
Confidence 478999999999999999997521 1123221 11111111100 010 10 1112
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhh
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWL 348 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~ 348 (375)
++. -|+++|++++++.. ..+.+|++.-.....+..+.+++|.++|++||+.+++|.++.|......-... .
T Consensus 169 ~~~-----~d~~~l~~~l~~~~---~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~-~ 239 (431)
T PRK06209 169 FRY-----NDIASLEALFEDHP---GRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK-L 239 (431)
T ss_pred cCC-----CCHHHHHHHHHhCC---CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH-H
Confidence 221 27899999997521 12334444332223444566999999999999999999998665321100111 1
Q ss_pred cCCCcccEEEEcCcccCCC
Q psy1596 349 AGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 349 ~gie~aDSi~~d~HK~l~~ 367 (375)
.++ ..|-+++ -|.++.
T Consensus 240 ~gv-~PDi~t~--gK~lgg 255 (431)
T PRK06209 240 YGI-VPDLSCF--GKALGN 255 (431)
T ss_pred hCC-Ccceeee--hhhhcC
Confidence 244 3576554 566654
No 346
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.76 E-value=0.0021 Score=66.49 Aligned_cols=150 Identities=15% Similarity=0.053 Sum_probs=83.9
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~ 268 (375)
...|+++||+||-.|+..||.....+... .+..+|.....-|-...-+..+.+ ..+..
T Consensus 116 ~v~f~~sGseAve~AlKlA~~~~~~rg~~----------~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~ 185 (453)
T PRK06943 116 HAFFASDGASAVEIALKMSFHAWRNRGRG----------DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHV 185 (453)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHHhCCC----------CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEE
Confidence 57999999999999999998754221000 012234444444543322322221 12233
Q ss_pred EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCcccc----ccHHHHHHHHHhcCCEEEEe
Q psy1596 269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACAF----DNLEELGPICEKEGLWLHVD 331 (375)
Q Consensus 269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGav----Dpl~eI~~ia~~~~iwlHVD 331 (375)
+|.....+ -++++|+++|+.. +..+.+|++.-. ....|.+ +=+++|.++|++||+.+++|
T Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~D 262 (453)
T PRK06943 186 VASPDARGARPGETAADVAARALADVRRLFAER---AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIAD 262 (453)
T ss_pred ECCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence 44321111 1246777777532 223445555421 2334543 45999999999999999999
Q ss_pred cccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
..+.|......-+.....|+ ..|-+++ -|.+.
T Consensus 263 EV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl~ 294 (453)
T PRK06943 263 EIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGIS 294 (453)
T ss_pred chhhCCCCCcchhHHHhCCC-CCCeEee--ehhhc
Confidence 99987644322222222355 4788888 56544
No 347
>PRK07678 aminotransferase; Validated
Probab=97.76 E-value=0.002 Score=66.60 Aligned_cols=167 Identities=16% Similarity=0.076 Sum_probs=92.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|.++++.. ....|+.+|||||-.|+..||.....+ +. + .++.
T Consensus 92 ~~lae~l~~~~~~~----------------------~~v~f~~sGseA~e~AlklAr~~t~~~-g~--~-------~r~~ 139 (451)
T PRK07678 92 IKLAEKLNEWLGGE----------------------YVIFFSNSGSEANETAFKIARQYHAQK-GE--P-------HRYK 139 (451)
T ss_pred HHHHHHHHHhCCCC----------------------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCcE
Confidence 66777777776432 247899999999999999999754211 00 0 0122
Q ss_pred EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCc---------CH---HHHHHHHHHhhhcCCccEEE
Q psy1596 244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSL---------RG---DKLIEAIERDKKKHLIPFFV 299 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~m---------d~---e~Le~aI~~~~~~g~~p~~V 299 (375)
+|-....-|-...-++.+.+ ..+..+|..+..+. |. +.+++.|+.. .+..+.+|
T Consensus 140 ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAv 217 (451)
T PRK07678 140 FISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAV 217 (451)
T ss_pred EEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEE
Confidence 33334444543333332221 12333443221211 12 2356666522 12234455
Q ss_pred EEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 300 CGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 300 v~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
++.--....|.+-+ ++++.++|++||+.|++|..+.|+...-.-+.....|+ ..|.+++ -|.++.
T Consensus 218 i~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lgg 286 (451)
T PRK07678 218 IMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITS 286 (451)
T ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--eccccc
Confidence 55433334455533 99999999999999999999976543221111112466 4798877 676553
No 348
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=97.74 E-value=0.0019 Score=66.21 Aligned_cols=150 Identities=15% Similarity=0.036 Sum_probs=81.6
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC-------------eEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV-------------KMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~-------------~v~ 267 (375)
...|+.+||+|+-.|+..||.....+ +. + .+..+|..+..-|-...-+..+.+. ...
T Consensus 107 ~v~f~~sGseA~e~AlklAr~~~~~~-~~--~-------~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~ 176 (427)
T TIGR00508 107 CVFLADSGSVAVEVALKMALQYWQAK-GE--K-------NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQI 176 (427)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhh-CC--C-------CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCe
Confidence 57999999999999999999864221 00 0 0122455555556443333322221 111
Q ss_pred EEecC-CCC-----CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc-----ccccHHHHHHHHHhcCCEEEEeccccc
Q psy1596 268 YIESD-DKL-----SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC-----AFDNLEELGPICEKEGLWLHVDAAYAG 336 (375)
Q Consensus 268 ~Vp~d-~~g-----~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG-----avDpl~eI~~ia~~~~iwlHVDaA~gg 336 (375)
.+|.. ... .-|.+++++.+++.. ....+|++---....| ..+.+++|.++|++||+.+++|.++.|
T Consensus 177 ~~~~p~~~~~~~~~~~~~~~l~~~l~~~~---~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG 253 (427)
T TIGR00508 177 FAPAPQNRFDEEWNEEAITPLAKLMELHS---DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATG 253 (427)
T ss_pred EcCCCCccccchhHHHHHHHHHHHHHhcC---CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 22211 001 114677788876431 1233444332113333 348899999999999999999999865
Q ss_pred CcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 337 SSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 337 ~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
......-+.....++ ..|.+++ -|.+.
T Consensus 254 ~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~ 280 (427)
T TIGR00508 254 FGRTGKLFACEHAGV-VPDILCV--GKALT 280 (427)
T ss_pred CCcCCccchhhhcCC-CCCEEEe--chhhh
Confidence 322111111112244 4676764 77664
No 349
>PRK07046 aminotransferase; Validated
Probab=97.73 E-value=0.00094 Score=69.05 Aligned_cols=157 Identities=15% Similarity=0.092 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596 160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 239 (375)
Q Consensus 160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~ 239 (375)
.+.+.++.+.|+++++++ ...|+.+||||+..|+..||....
T Consensus 114 ~~~~~~lAe~l~~~~~~~-----------------------~v~F~nSGtEA~e~AlrlAR~~TG--------------- 155 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP-----------------------YWQVATTATDANRFVLRWARAVTG--------------- 155 (453)
T ss_pred CHHHHHHHHHHHHHhCCC-----------------------EEEEECCHHHHHHHHHHHHHHhhC---------------
Confidence 345577888888887543 368999999999999999997521
Q ss_pred cCceEEEecCCCchHHHHHH-H-Hc----------CC------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEE
Q psy1596 240 NSRLVAYCSDQAHSSVEKAG-L-IG----------LV------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG 301 (375)
Q Consensus 240 ~~~~vV~~S~~aH~Sv~kaa-~-lg----------~~------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~ 301 (375)
++.++-....-|-...-.. . .. +. .+..+|-+ |++.|++.+.. + ...+|++
T Consensus 156 -r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~----~-~vAavi~ 224 (453)
T PRK07046 156 -RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-----DLAALEAALAD----G-DVAAVLA 224 (453)
T ss_pred -CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-----CHHHHHHHhCC----C-CeEEEEE
Confidence 1113333333343211111 0 00 10 12222221 78999998842 1 2345554
Q ss_pred EcCCCCcccccc----HHHHHHHHHhcCCEEEEecccc----cCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 302 TLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYA----GSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 302 t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~g----g~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
.--....|.+-| +++|.++|++||+.+++|..+. .+. . .. ..|+ ..|-+++ -|.++.-+++|+
T Consensus 225 EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg-~----~~-~~gv-~PDi~t~--gK~lggG~Pi~a 295 (453)
T PRK07046 225 EPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGG-Y----TR-AHGL-EPDFLVV--GKPIAGGVPCAV 295 (453)
T ss_pred CCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcc-h----hH-HhCC-Cccceee--hhhhcCCCccee
Confidence 433333455533 8999999999999999999984 221 1 11 1255 4788775 677665566665
Q ss_pred e
Q psy1596 374 M 374 (375)
Q Consensus 374 l 374 (375)
+
T Consensus 296 v 296 (453)
T PRK07046 296 Y 296 (453)
T ss_pred e
Confidence 3
No 350
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.72 E-value=0.00023 Score=70.38 Aligned_cols=126 Identities=18% Similarity=0.253 Sum_probs=90.2
Q ss_pred EEEecCCCchHHHHHH-HHcCCeEEEEecCC----------CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc---
Q psy1596 244 VAYCSDQAHSSVEKAG-LIGLVKMRYIESDD----------KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC--- 309 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa-~lg~~~v~~Vp~d~----------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG--- 309 (375)
+..+....|+-.-++- ...|..++-|++++ .|.+|++.|++.|++.-.. .+|.++.....++..|
T Consensus 125 ~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~-nvp~I~~tiT~NsagGQpV 203 (471)
T COG3033 125 KMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD-NVPYIVLTITNNSAGGQPV 203 (471)
T ss_pred cccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc-cCcEEEEEEeccccCCCcc
Confidence 4556678888888875 45555566665532 3779999999999875443 4576555555555555
Q ss_pred ccccHHHHHHHHHhcCCEEEEeccccc-Ccccc----hhhhhh-----h-cCCCcccEEEEcCcccCCCCCc
Q psy1596 310 AFDNLEELGPICEKEGLWLHVDAAYAG-SSFIC----PEFRKW-----L-AGVEYANSIAFNPSKWLMVHFD 370 (375)
Q Consensus 310 avDpl~eI~~ia~~~~iwlHVDaA~gg-~~~~~----~~~~~~-----~-~gie~aDSi~~d~HK~l~~P~~ 370 (375)
++++++++.+||++|++.+..|+|.-+ .+.+. |.|+++ . .-+.+||-++.|+-|=.++++|
T Consensus 204 Sm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG 275 (471)
T COG3033 204 SMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG 275 (471)
T ss_pred hHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc
Confidence 469999999999999999999998654 44443 334432 1 1235799999999999999886
No 351
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.71 E-value=0.0029 Score=65.63 Aligned_cols=150 Identities=15% Similarity=0.034 Sum_probs=85.4
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~ 268 (375)
...|+++|||||-.|+..||.....+-.. .+..+|.....-|-...-+..+.+. .+..
T Consensus 109 ~v~f~~sGsEAve~AlKlAr~~~~~~g~t----------~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~ 178 (466)
T PRK07030 109 RCFYADNGSSAIEVALKMSFHYWRNRGKP----------RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIK 178 (466)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHHhCCC----------CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEE
Confidence 57999999999999999998753221000 0122444444455444344333221 1233
Q ss_pred EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcccc----ccHHHHHHHHHhcCCEEEEe
Q psy1596 269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACAF----DNLEELGPICEKEGLWLHVD 331 (375)
Q Consensus 269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGav----Dpl~eI~~ia~~~~iwlHVD 331 (375)
+|.....+ -+++.|++.|++. +....+|++.- .-...|.+ +=+++|.++|++||+.+++|
T Consensus 179 ~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~---~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~D 255 (466)
T PRK07030 179 VPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH---HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHD 255 (466)
T ss_pred cCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 43221111 1246677777632 22344555543 12333544 45999999999999999999
Q ss_pred cccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
..+.|......-+.....|+ ..|.+++ -|.+.
T Consensus 256 EV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~ 287 (466)
T PRK07030 256 EIAVGFGRTGTMFACEQAGI-RPDFLCL--SKALT 287 (466)
T ss_pred ehhhCcCccccchHHHhcCC-CCCEEee--ehhcc
Confidence 99887644332222223366 4788888 56544
No 352
>PRK07036 hypothetical protein; Provisional
Probab=97.70 E-value=0.0052 Score=63.76 Aligned_cols=152 Identities=13% Similarity=0.036 Sum_probs=83.6
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~ 268 (375)
...|+++|||||-.|+..||.....+ +. . .+..+|.....-|-...-+..+.+ ..+..
T Consensus 114 ~v~f~~sGseAve~AlklAr~~~~~~-g~--t-------~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~ 183 (466)
T PRK07036 114 HVFLTTGGSTAVDSALRFVHYYFNVR-GR--P-------AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHH 183 (466)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHHhc-CC--C-------CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEE
Confidence 57999999999999999998753211 00 0 012233344444543322222221 11333
Q ss_pred EecCCC----CCcC--------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q psy1596 269 IESDDK----LSLR--------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 269 Vp~d~~----g~md--------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDa 332 (375)
+|.... ..+. .+.+++.|... .+..+.+|++.-.....|.+-| +++|.++|++||+.+++|.
T Consensus 184 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DE 261 (466)
T PRK07036 184 LSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDE 261 (466)
T ss_pred ecCCcccccccCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEee
Confidence 433111 1111 23455555431 1223556666654445566655 9999999999999999999
Q ss_pred ccccCcccchhhhhh-hcCCCcccEEEEcCcccCCC
Q psy1596 333 AYAGSSFICPEFRKW-LAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 333 A~gg~~~~~~~~~~~-~~gie~aDSi~~d~HK~l~~ 367 (375)
.+.|......-+... ..|+ ..|.+++ -|.++.
T Consensus 262 V~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~g 294 (466)
T PRK07036 262 VVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTS 294 (466)
T ss_pred chhCCCcCchhhhhhhhcCC-CCCEEEE--cccccc
Confidence 997753332111111 2355 4688777 676654
No 353
>PRK07480 putative aminotransferase; Validated
Probab=97.68 E-value=0.00098 Score=68.96 Aligned_cols=169 Identities=15% Similarity=0.066 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
..+.++.+.|+++++-+ -....|+++|||||-.|+..||.....+ +. .
T Consensus 94 ~~~~~lae~L~~~~p~~---------------------~~~v~f~~SGseA~e~AlklAr~~~~~~-g~----------~ 141 (456)
T PRK07480 94 PPAIELAAKLAEVAPPG---------------------FNHVFFTNSGSEANDTVLRMVRHYWALK-GK----------P 141 (456)
T ss_pred HHHHHHHHHHHHhCCCC---------------------cCEEEEeCCcHHHHHHHHHHHHHHHHhc-CC----------C
Confidence 33467778888876321 1257899999999999999999753211 00 0
Q ss_pred CceEEE-ecCCCchHHHHHHHHcCC------------eEEEEecCCCCC----cC--------HHHHHHHHHHhhhcCCc
Q psy1596 241 SRLVAY-CSDQAHSSVEKAGLIGLV------------KMRYIESDDKLS----LR--------GDKLIEAIERDKKKHLI 295 (375)
Q Consensus 241 ~~~vV~-~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~----md--------~e~Le~aI~~~~~~g~~ 295 (375)
.+..|+ ....-|-...-+..+++. .+..++....++ .+ .++|++.+.+.. +..
T Consensus 142 ~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~ 219 (456)
T PRK07480 142 QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELG--ADN 219 (456)
T ss_pred CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCc
Confidence 122333 334445433333333221 122233111000 11 255655554321 122
Q ss_pred cEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 296 PFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 296 p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
+.+|++.--....|.+-+ +++|.++|++||+.+++|..+.|......-+.....|+ ..|-+++ -|.+.
T Consensus 220 vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~ 291 (456)
T PRK07480 220 VAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLT 291 (456)
T ss_pred EEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhc
Confidence 445554433334466544 99999999999999999999976543322222222355 4787766 67654
No 354
>PRK07482 hypothetical protein; Provisional
Probab=97.67 E-value=0.0019 Score=66.93 Aligned_cols=151 Identities=12% Similarity=-0.023 Sum_probs=83.7
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC------------CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL------------VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~------------~~v~ 267 (375)
...|+.+||||+-.|+..||.....+ +. ..+..|+ ....-|-...-+..+.+ ..+.
T Consensus 113 ~v~f~~sGSEAve~AlKlAr~~~~~~-g~----------~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~ 181 (461)
T PRK07482 113 KVYYGLSGSDANETQIKLVWYYNNVL-GR----------PEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVL 181 (461)
T ss_pred EEEEeCchHHHHHHHHHHHHHHHHhc-CC----------CCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCE
Confidence 47899999999999999999753211 00 0122333 33334432221211111 1223
Q ss_pred EEecCCCCC-------------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEE
Q psy1596 268 YIESDDKLS-------------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHV 330 (375)
Q Consensus 268 ~Vp~d~~g~-------------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHV 330 (375)
.++.....+ -+.++|++.+.+.. +..+.+|++.--....|.+ +=+++|.++|++||+.+++
T Consensus 182 ~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~ 259 (461)
T PRK07482 182 HTEAPHYYRRADAGMSEEQFSAYCADELEELILAEG--PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIA 259 (461)
T ss_pred EcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEE
Confidence 333211111 14577787775321 1224455544322233444 3489999999999999999
Q ss_pred ecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 331 DAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 331 DaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
|..+.|+.....-+.....|+ ..|-+++ -|.+..
T Consensus 260 DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~g 293 (461)
T PRK07482 260 DEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKGLTS 293 (461)
T ss_pred eccccCCCcCcchhhHHhcCC-CCCEEEE--cccccc
Confidence 999988754433222223466 4888887 576643
No 355
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=97.66 E-value=0.0022 Score=66.10 Aligned_cols=171 Identities=11% Similarity=-0.010 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+.++.+.|.+++.-+ ......|+++|||||-.|+..||.... ++
T Consensus 99 ~~~la~~L~~~~p~~--------------------~~~~v~f~~sGseA~e~AlklAr~~tg----------------r~ 142 (451)
T PRK06918 99 YIELAEKLAALAPGS--------------------FDKKVLFLNSGAEAVENAVKIARKYTK----------------RQ 142 (451)
T ss_pred HHHHHHHHHHhCCCC--------------------CCCEEEEcCCcHHHHHHHHHHHHHHhC----------------CC
Confidence 367777888876322 112579999999999999999997521 11
Q ss_pred eEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCC----CcC--------HHHHHHHHHHhhhcCCccE
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKL----SLR--------GDKLIEAIERDKKKHLIPF 297 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g----~md--------~e~Le~aI~~~~~~g~~p~ 297 (375)
.+|-....-|-...-++.+.+ ..+..+|..... .+. .+.+++.+.... .+..+.
T Consensus 143 ~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iA 221 (451)
T PRK06918 143 GIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIA 221 (451)
T ss_pred cEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceE
Confidence 233333334433333332221 113333321100 111 123444442211 122244
Q ss_pred EEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 298 FVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 298 ~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+|++.--....|.+ +-+++|.++|++||++|+.|..|.+.......+.....++ ..|.+ ..-|.+..-+..|.
T Consensus 222 avi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig~ 298 (451)
T PRK06918 222 AVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPISG 298 (451)
T ss_pred EEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEE--eeehhhcCCCccEE
Confidence 44444322233443 3499999999999999999999987643211111111132 35744 45787765454454
No 356
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.65 E-value=0.0035 Score=65.20 Aligned_cols=150 Identities=15% Similarity=0.077 Sum_probs=84.5
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~ 268 (375)
...|+++|||||-.|+..||.....+ +. . .+..+|.....-|-...-++.+.+. .+..
T Consensus 131 ~v~f~~sGSEAvE~AlKlAr~~~~~~-g~--~-------~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~ 200 (472)
T PRK08742 131 KVFYADNGSAGVEVALKMAFHYFHNR-GE--H-------RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLF 200 (472)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEE
Confidence 57999999999999999999864321 10 0 0122444444445443333333211 2333
Q ss_pred EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcccc----ccHHHHHHHHHhcCCEEEEe
Q psy1596 269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACAF----DNLEELGPICEKEGLWLHVD 331 (375)
Q Consensus 269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGav----Dpl~eI~~ia~~~~iwlHVD 331 (375)
+|..+..+ -+++.|+++++.. +..+.+|++.- -....|.+ +=++++.++|++||+.|++|
T Consensus 201 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~D 277 (472)
T PRK08742 201 APSPDAYLAEPGQSAEDYALQAADALQALFEQS---PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIAD 277 (472)
T ss_pred eCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 44321111 1356677777532 12344454442 12333543 44999999999999999999
Q ss_pred cccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
..+.|....-.-+.....|+ ..|-+++ -|.++
T Consensus 278 EV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~ 309 (472)
T PRK08742 278 EIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLT 309 (472)
T ss_pred chhhCCCCCccchHHHhcCC-CCCEEEE--ccccc
Confidence 99887643322222222355 4788888 56654
No 357
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.65 E-value=0.0037 Score=64.73 Aligned_cols=150 Identities=13% Similarity=0.059 Sum_probs=84.2
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~ 268 (375)
...|+.+|||||-.|+..||.....+ +. . .++.+|.....-|-...-++.+.+. .+..
T Consensus 118 ~v~f~~SGseAve~AlklAr~~~~~~-g~--t-------gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~ 187 (460)
T PRK06916 118 KVFYSDSGATAVEIAIKMAFQYWQNK-GK--P-------KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIK 187 (460)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEE
Confidence 57999999999999999999753221 00 0 0122444454556544444444321 1233
Q ss_pred EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcccc----ccHHHHHHHHHhcCCEEEEe
Q psy1596 269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACAF----DNLEELGPICEKEGLWLHVD 331 (375)
Q Consensus 269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGav----Dpl~eI~~ia~~~~iwlHVD 331 (375)
+|....++ -++++|++.|+.. +..+.+|++.- .....|.+ +=+++|.++|++||+.+++|
T Consensus 188 ~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~D 264 (460)
T PRK06916 188 MPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK---HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITD 264 (460)
T ss_pred eCCCcccccccCCChHHHHHHHHHHHHHHHHhC---CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence 43211111 1356677777532 22344555543 12333544 44899999999999999999
Q ss_pred cccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
..+.|......-+.....|+ ..|-+++ -|.++
T Consensus 265 EV~TG~GRtG~~~a~~~~gv-~PDiv~~--gK~l~ 296 (460)
T PRK06916 265 EVATGFGRTGKMFACEHENV-TPDIMTA--GKGLT 296 (460)
T ss_pred chhhCCCcCchhhHHHhcCC-CCCeeee--ehhhh
Confidence 99877533322222222355 4787776 56544
No 358
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.65 E-value=0.00066 Score=68.22 Aligned_cols=150 Identities=11% Similarity=-0.097 Sum_probs=91.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEE-EeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFIT-FQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gv-ftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
+++.+.|+++|+.|. ....+ +++|||.+.-.+++..... ..+
T Consensus 52 ~~~~~~Lr~Ll~~P~--------------------~y~Vlfl~GggT~~~ea~~~Nll~~-----------------g~~ 94 (364)
T PRK12462 52 AQAEADLRDLLGIPD--------------------EYGVVFLQGGSSLQFSMIPMNFSRP-----------------GAA 94 (364)
T ss_pred HHHHHHHHHHhCCCC--------------------CCeEEEEeccHHHHHHHHHHHcCCC-----------------CCc
Confidence 788999999999982 23344 4556777765555433210 011
Q ss_pred -e-EEEecCCCchHHHHHHHHcCCeEEEEec----CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596 243 -L-VAYCSDQAHSSVEKAGLIGLVKMRYIES----DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE 316 (375)
Q Consensus 243 -~-vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~----d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e 316 (375)
. ++.....++-....|.+++. +..+.. +-....+++.+ .+.++ ..+|..|...|.+|..-|
T Consensus 95 ~~~~~~tG~fg~r~~~ea~~~g~--v~~~~~~~~~~~~~~p~~~~~--~~~~d------~~~v~~t~NETstGv~~~--- 161 (364)
T PRK12462 95 APEYVTTGYWSRKAIGEASRVAA--MRVVWDGAASGYRTLPSLAEL--DWDAR------APFRHYVSNETVEGLQFP--- 161 (364)
T ss_pred EEEEEeCCHHHHHHHHHHHhcCC--ceEecCcCCCCCCcCCCHHHh--ccCCC------CcEEEEccCCCCceEecC---
Confidence 1 23333444444455556664 443332 11123455554 11112 347999999999998765
Q ss_pred HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
++.+.++..++||+.=+.+....+ +++.|.+.....|.++ |-|.+++
T Consensus 162 --~~~~~~~~llvvD~sS~~~s~pid--------~~~~dvi~agsQKnlg-P~Gltvv 208 (364)
T PRK12462 162 --DAAGLPDSPLIADMSSDFMSRPFD--------VEAYGMVYAHAQKNLG-PAGVTVA 208 (364)
T ss_pred --cccccCCCeEEEEcCchhhCCCCC--------hHHccEEEeeccccCC-CCceEEE
Confidence 333446899999997766544221 2334999999999998 8898876
No 359
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=97.64 E-value=0.0015 Score=66.51 Aligned_cols=167 Identities=14% Similarity=0.056 Sum_probs=104.8
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
-...++|.++.+.+.++++.- ...-|+++||||++.|+++||....
T Consensus 89 g~Pte~Ei~~Aell~~~~p~~----------------------e~vrfvnSGTEAtmsAiRlARa~Tg------------ 134 (432)
T COG0001 89 GAPTELEVELAELLIERVPSI----------------------EKVRFVNSGTEATMSAIRLARAYTG------------ 134 (432)
T ss_pred CCCCHHHHHHHHHHHHhcCcc----------------------cEEEEecchhHHHHHHHHHHHHhhC------------
Confidence 334456677778888876542 2468999999999999999998631
Q ss_pred hhhcCceEEEecCCCchHHHHHHH-Hc------------C------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccE
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKAGL-IG------------L------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPF 297 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg------------~------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~ 297 (375)
++.+|-....-|-+.+.... .+ | ..++.+|-+ |+++|++++++... ...
T Consensus 135 ----R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g~---~IA 202 (432)
T COG0001 135 ----RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEYGD---DIA 202 (432)
T ss_pred ----CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHcCC---cEE
Confidence 12345555555655444431 11 1 134555554 99999999987522 244
Q ss_pred EEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 298 FVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 298 ~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+|++----.+.|.|-| +++|.++|+++|..|+.|....|+-.-.-- ....-|| ..|..++ -|-++.-+++|+
T Consensus 203 aVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gG-aq~~~gi-~PDlttl--GKiIGGGlP~ga 278 (432)
T COG0001 203 AVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGG-AQGYYGV-EPDLTTL--GKIIGGGLPIGA 278 (432)
T ss_pred EEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcc-cccccCc-Ccchhhh--hhhhcCCcceee
Confidence 6666555566777754 888999999999999999998775332111 1112233 2454443 455555555554
No 360
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=97.62 E-value=0.0018 Score=66.52 Aligned_cols=165 Identities=11% Similarity=0.016 Sum_probs=89.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|+++++-+ -....|+.+|||||-.|+..||.....+ +. .++-
T Consensus 89 ~~la~~L~~~~p~~---------------------~~~v~f~~SGsEAve~AlklAr~~~~~~-g~----------~r~k 136 (428)
T PRK07986 89 IELCRKLVAMTPQP---------------------LECVFLADSGSVAVEVAMKMALQYWQAK-GE----------PRQR 136 (428)
T ss_pred HHHHHHHHhhCCCC---------------------cCEEEEeCCcHHHHHHHHHHHHHHHHhc-CC----------CCcE
Confidence 66777787775321 1357899999999999999999753211 00 0122
Q ss_pred EEEecCCCchHHHHHHHHcC-------------CeEEEEecCC-C----C-CcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596 244 VAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDD-K----L-SLRGDKLIEAIERDKKKHLIPFFVCGTLG 304 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~-~----g-~md~e~Le~aI~~~~~~g~~p~~Vv~t~G 304 (375)
+|.....-|-...-+..+.+ ..+..+|.-. . + .-|.++|++.|++. +....+|+..-.
T Consensus 137 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi 213 (428)
T PRK07986 137 FLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPI 213 (428)
T ss_pred EEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEech
Confidence 34444444543322222211 1122333211 1 0 12567888888642 112334444321
Q ss_pred -CCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 305 -TTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 305 -tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
....|.+ +.+++|.++|++||+.+++|.++.|....-.-+.....|+ ..|.++ .-|.++
T Consensus 214 ~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t--~gK~l~ 277 (428)
T PRK07986 214 VQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILC--LGKALT 277 (428)
T ss_pred hcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEE--echhhh
Confidence 2233332 4599999999999999999999866422111111112344 367776 467654
No 361
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.62 E-value=0.0032 Score=65.36 Aligned_cols=154 Identities=16% Similarity=0.089 Sum_probs=87.5
Q ss_pred EEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596 202 ITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY 268 (375)
Q Consensus 202 Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~ 268 (375)
.+|+ ++|||||-.|+..||.... ++.+|.....-|-...-++.+.+ ..+..
T Consensus 129 v~f~~~SGSEAve~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~ 192 (464)
T PRK06938 129 IQFCGPTGTDAVEAALKLVKTATG----------------RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQF 192 (464)
T ss_pred EEEeCCCcHHHHHHHHHHHHHhhC----------------CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEE
Confidence 4565 6999999999999997420 12244444444544333333211 12345
Q ss_pred EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEec
Q psy1596 269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDa 332 (375)
+|.....+ .+.+.|++.+++.......+.+|++.---...|.+ +=++++.++|++||+.+++|.
T Consensus 193 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DE 272 (464)
T PRK06938 193 LPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDE 272 (464)
T ss_pred eCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 55422211 23677888886422111124445444322233444 348999999999999999999
Q ss_pred ccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 333 AYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 333 A~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
.+.|....-.-+.....|+ ..|-+++ -|.++.-++.|++
T Consensus 273 V~tGfGRtG~~~a~e~~gv-~PDiv~~--gKglggG~PlsAv 311 (464)
T PRK06938 273 IQSGFGRTGKMFAFEHAGI-IPDVVVL--SKAIGGSLPLAVV 311 (464)
T ss_pred cccCCCcCcHHHHHHhcCC-CCCEEEe--eccccCCCceEEE
Confidence 9987644332222222355 4788888 5665544445543
No 362
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.61 E-value=0.0038 Score=63.91 Aligned_cols=146 Identities=13% Similarity=0.061 Sum_probs=78.4
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce-EEEecCCCchHHHHHHHHcC-------------CeE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL-VAYCSDQAHSSVEKAGLIGL-------------VKM 266 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~-vV~~S~~aH~Sv~kaa~lg~-------------~~v 266 (375)
...|+++|||||-.|+..||.....+ +. ..+. +|.....-|-...-++.+.+ ..+
T Consensus 102 ~v~f~~SGseA~e~AlklAr~~~~~~-g~----------~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~ 170 (422)
T PRK05630 102 HVFYSDSGSVSVEVAIKMALQYSKGQ-GH----------PERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQ 170 (422)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhc-CC----------CCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCC
Confidence 47899999999999999999864221 00 0122 44455555543333332211 122
Q ss_pred EEEecCCCCCcCH-------HHHHHHHHHhhhcCCccEEEEEEcC-CCCccc----cccHHHHHHHHHhcCCEEEEeccc
Q psy1596 267 RYIESDDKLSLRG-------DKLIEAIERDKKKHLIPFFVCGTLG-TTGACA----FDNLEELGPICEKEGLWLHVDAAY 334 (375)
Q Consensus 267 ~~Vp~d~~g~md~-------e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGa----vDpl~eI~~ia~~~~iwlHVDaA~ 334 (375)
..+|.......+. +.+++.+.. ...+|++.-. ....|. -+.+++|.++|++||+.+++|.++
T Consensus 171 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~ 244 (422)
T PRK05630 171 IFAPAPPVRGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA 244 (422)
T ss_pred eEcCCCcccCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce
Confidence 3333221111122 233444432 1334444421 222343 367999999999999999999998
Q ss_pred ccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 335 AGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 335 gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
.|....-.-+.....++ ..|.+++ -|.+.
T Consensus 245 tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~ 273 (422)
T PRK05630 245 TGFGRTGELFATLAAGV-TPDIMCV--GKALT 273 (422)
T ss_pred eCCCcCchhhHHHhcCC-CCCeeee--echhh
Confidence 76533211111112344 4677765 68763
No 363
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.58 E-value=0.005 Score=63.78 Aligned_cols=151 Identities=15% Similarity=0.043 Sum_probs=82.1
Q ss_pred EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC------------CeEEEE
Q psy1596 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL------------VKMRYI 269 (375)
Q Consensus 203 vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~------------~~v~~V 269 (375)
+++++|||||-.|+..||... .+..|+ ....-|-...-++.+.+ ..+..+
T Consensus 125 f~~~SGsEAve~AlklAr~~t-----------------gr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~ 187 (459)
T PRK06931 125 FTGPSGADAVEAAIKLAKTYT-----------------GRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFM 187 (459)
T ss_pred EeCCCcHHHHHHHHHHHHHhc-----------------CCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEe
Confidence 445899999999999999752 122343 33344433333333321 123444
Q ss_pred ecCCCCC--------cCHHHHHHHHHHhhh----cCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecc
Q psy1596 270 ESDDKLS--------LRGDKLIEAIERDKK----KHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAA 333 (375)
Q Consensus 270 p~d~~g~--------md~e~Le~aI~~~~~----~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA 333 (375)
|..+..+ -+.+++++.+++... .+..+.+|++.-.-...|.+ +=+++|.++|++||+.+++|..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV 267 (459)
T PRK06931 188 PYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEV 267 (459)
T ss_pred CCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 4322111 134555444443322 11224444443322333443 3399999999999999999999
Q ss_pred cccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596 334 YAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 334 ~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+.|....-.-+.....|+ ..|-+++ -|.++.-++.|+
T Consensus 268 ~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~a 304 (459)
T PRK06931 268 QAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAV 304 (459)
T ss_pred hhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceee
Confidence 987644332222222355 4788887 565544344444
No 364
>PRK06917 hypothetical protein; Provisional
Probab=97.57 E-value=0.0067 Score=62.62 Aligned_cols=167 Identities=15% Similarity=0.014 Sum_probs=91.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|++++.-. .....|+++||||+-.|+..||.+...+.. ..+.
T Consensus 77 ~~lae~L~~~~p~~---------------------~~~v~f~~sGsEAve~AlklAr~~~~~rg~-----------t~r~ 124 (447)
T PRK06917 77 EKLAKKLSDLSPGD---------------------LNWSFFVNSGSEANETAMKIAIQHFQERGI-----------QGKH 124 (447)
T ss_pred HHHHHHHHHhCCCC---------------------CCEEEEeCChHHHHHHHHHHHHHHHHhcCC-----------CCCC
Confidence 66777887776321 135789999999999999999975422100 1122
Q ss_pred EEE-ecCCCchHHHHHHHHcCC------------eEEEEecCCCCC------------cCHHHHHHHHHHhhhcCCccEE
Q psy1596 244 VAY-CSDQAHSSVEKAGLIGLV------------KMRYIESDDKLS------------LRGDKLIEAIERDKKKHLIPFF 298 (375)
Q Consensus 244 vV~-~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~ 298 (375)
.|+ ....-|-...-++.+.+. .+..+|.....+ -+.+.|++++++... ..+.+
T Consensus 125 ~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~--~~iAA 202 (447)
T PRK06917 125 KILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGA--EHIAA 202 (447)
T ss_pred EEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC--CceEE
Confidence 343 333444333333333221 112222111111 024566777753211 12445
Q ss_pred EEEEcCCCCcc-cc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596 299 VCGTLGTTGAC-AF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 299 Vv~t~GtT~tG-av----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~ 367 (375)
|++.--....| .+ +=+++|.++|++||+.+++|.++.|....-.-+.....++ ..|-+++ -|.++.
T Consensus 203 vi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~ 273 (447)
T PRK06917 203 FIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGA 273 (447)
T ss_pred EEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhcc
Confidence 55543222223 32 4489999999999999999999987533322221122355 3687766 677654
No 365
>KOG3843|consensus
Probab=97.57 E-value=0.00021 Score=68.16 Aligned_cols=122 Identities=21% Similarity=0.104 Sum_probs=89.7
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc---cccHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA---FDNLEEL 317 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa---vDpl~eI 317 (375)
.|+-.....-|-.|...-.|.+.+.|.. .+.-+-|++++++.|++.- |-+|.+..-||..-+ -|++++|
T Consensus 105 yiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g-----~dcilci~sttscfapr~pd~leai 179 (432)
T KOG3843|consen 105 YIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELG-----EDCILCIHSTTSCFAPRSPDNLEAI 179 (432)
T ss_pred EEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhC-----CceEEEEeecccccCCCCCchHHHH
Confidence 4555666777777877767777666653 2456778999999998753 335666666666543 4999999
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhh---hcCCCcccEEEEcCcccCCCCCccee
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKW---LAGVEYANSIAFNPSKWLMVHFDCTA 373 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~---~~gie~aDSi~~d~HK~l~~P~~~g~ 373 (375)
+.||..|+++-+|.-|||.-. .+.-++ -....+.|.++-+..|.+.+|.|..+
T Consensus 180 aaica~~diphivnnayglqs---ee~i~~iaa~~~~grida~vqsldknf~vpvggai 235 (432)
T KOG3843|consen 180 AAICAAHDIPHIVNNAYGLQS---EECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAI 235 (432)
T ss_pred HHHHHccCchhhhccccccch---HHHHHHHHHHhhhccHHHHHHHhhhcceeecchhH
Confidence 999999999999999999863 222222 22356889999999999999998654
No 366
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.55 E-value=0.0044 Score=64.34 Aligned_cols=160 Identities=11% Similarity=-0.027 Sum_probs=87.5
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhc-----cCC---cchh--hhhcCc-eEEEecCCCchHHHHHHHHcCC-----
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQ-----SHP---ELEH--AEINSR-LVAYCSDQAHSSVEKAGLIGLV----- 264 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~-----~~~---~~~~--~~~~~~-~vV~~S~~aH~Sv~kaa~lg~~----- 264 (375)
...|+++|||||-.|+..||.+.....+. .+. ++-. ....++ .+|-....-|-...-+..+.+.
T Consensus 124 ~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~ 203 (464)
T TIGR00699 124 QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHK 203 (464)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 47999999999999999999754211000 000 0000 000012 2444444556555545444321
Q ss_pred ------eEEEEecCC-CCC-------------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHH
Q psy1596 265 ------KMRYIESDD-KLS-------------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPI 320 (375)
Q Consensus 265 ------~v~~Vp~d~-~g~-------------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~i 320 (375)
....+|... .+. -+++.|+++|++. +..+.+|++.--....|.+-+ +++|.++
T Consensus 204 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l 280 (464)
T TIGR00699 204 LDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI 280 (464)
T ss_pred cCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 111222211 000 1356677777532 122455665544445576766 9999999
Q ss_pred HHhcCCEEEEecccccCcccchhhhhhhcCCC-cccEEEEcCcccC
Q psy1596 321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-YANSIAFNPSKWL 365 (375)
Q Consensus 321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~aDSi~~d~HK~l 365 (375)
|++||+.|++|.++.|....-.-+.....|++ ..|-+++ -|.+
T Consensus 281 c~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~l 324 (464)
T TIGR00699 281 TKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKF 324 (464)
T ss_pred HHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhh
Confidence 99999999999998775432221222233564 5788776 5655
No 367
>PRK07483 hypothetical protein; Provisional
Probab=97.54 E-value=0.0086 Score=61.75 Aligned_cols=150 Identities=17% Similarity=0.091 Sum_probs=80.4
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC------------CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL------------VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~------------~~v~ 267 (375)
...|+++|||||-.|+..||.....+ + . ..+..|+ ....-|-...-+..+.+ ..+.
T Consensus 92 ~v~f~~sGsEAve~AlklAr~~~~~~-g--~--------~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~ 160 (443)
T PRK07483 92 HVYFVSGGSEAVEAALKLARQYFVEI-G--Q--------PQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAH 160 (443)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhc-C--C--------CCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCE
Confidence 47899999999999999999753211 0 0 0122333 34444543333332221 1123
Q ss_pred EEecCCCCCc-------------CHHHHHHHHHHhhhcCCccEEEEEEcCCC-Ccccccc----HHHHHHHHHhcCCEEE
Q psy1596 268 YIESDDKLSL-------------RGDKLIEAIERDKKKHLIPFFVCGTLGTT-GACAFDN----LEELGPICEKEGLWLH 329 (375)
Q Consensus 268 ~Vp~d~~g~m-------------d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT-~tGavDp----l~eI~~ia~~~~iwlH 329 (375)
.+|....++- .+++|++++.+.. ...+.+|++.--.. ..|.+-+ +++|.++|++||+.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI 238 (443)
T PRK07483 161 HVSPCYAYREQRAGESDEAYGQRLADELEAKILELG--PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLI 238 (443)
T ss_pred EeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC--CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEE
Confidence 3332111111 1256666664311 11233444432211 2244432 9999999999999999
Q ss_pred EecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 330 VDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 330 VDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
+|..+.|....-.-+.....|+ ..|-+++ -|.+.
T Consensus 239 ~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~ 272 (443)
T PRK07483 239 LDEVMCGMGRTGTLFACEEDGV-APDLVTI--AKGLG 272 (443)
T ss_pred EecceeCcccCcHHHHHhhcCC-CCCeeee--hhhhc
Confidence 9999987644322222222355 4787777 56655
No 368
>PRK06148 hypothetical protein; Provisional
Probab=97.53 E-value=0.0045 Score=70.11 Aligned_cols=155 Identities=15% Similarity=0.051 Sum_probs=86.4
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc----------C--CeEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG----------L--VKMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg----------~--~~v~~ 268 (375)
...|+.+|||||-.|+..||.... ++.+|.....-|-...-+..+. + ..+..
T Consensus 682 ~v~f~nSGsEA~e~AlklAr~~tG----------------r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~ 745 (1013)
T PRK06148 682 VAFFVNSGSEANSLALRLARAHTG----------------QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEV 745 (1013)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcC----------------CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceE
Confidence 468999999999999999997521 1123333333342222221111 0 12222
Q ss_pred EecCCCC--Cc---C-------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q psy1596 269 IESDDKL--SL---R-------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 269 Vp~d~~g--~m---d-------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDa 332 (375)
++..+.+ .. + .+.++++|+.....+..+.+|++----...|.+-+ +++|.++|++||+.+++|.
T Consensus 746 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DE 825 (1013)
T PRK06148 746 AEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADE 825 (1013)
T ss_pred cCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 2211111 11 1 24577777543223334556665543334465544 9999999999999999999
Q ss_pred ccccCcccch-hhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 333 AYAGSSFICP-EFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 333 A~gg~~~~~~-~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
.+.|...... -+.....|+ ..|-+++ -|.++.-++.|++
T Consensus 826 VqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav 865 (1013)
T PRK06148 826 VQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAV 865 (1013)
T ss_pred cccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEE
Confidence 9976543322 111122355 4788877 6776654555543
No 369
>PRK05965 hypothetical protein; Provisional
Probab=97.52 E-value=0.011 Score=61.26 Aligned_cols=151 Identities=13% Similarity=0.013 Sum_probs=83.2
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~ 268 (375)
...|+++|||||-.|+..||.....+ +. + .++.+|.....-|-...-+..+.+ ..+..
T Consensus 109 ~v~f~~sGSEAve~AlKlAr~~~~~~-g~--~-------~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~ 178 (459)
T PRK05965 109 HVYFTLGGSDAVDSAVRFIRHYWNAT-GR--P-------SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHK 178 (459)
T ss_pred EEEEeCChhHHHHHHHHHHHHHHHhc-CC--C-------CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEE
Confidence 57999999999999999999864211 00 0 012234444444543332322211 11233
Q ss_pred EecCCCCC----cC--------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEec
Q psy1596 269 IESDDKLS----LR--------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 269 Vp~d~~g~----md--------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDa 332 (375)
+|.....+ -| +++|++.|++... ..+.+|++.--....|.+ +=+++|.++|++||+.|++|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DE 256 (459)
T PRK05965 179 IPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGA--DNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADE 256 (459)
T ss_pred cCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC--CceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 43211111 13 2567777754211 224455554332333443 458999999999999999999
Q ss_pred ccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 333 AYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 333 A~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
.+.|+.....-+.....|+ ..|-+++ -|.+.
T Consensus 257 V~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~ 287 (459)
T PRK05965 257 VITGFGRTGPLFACEAEGV-VPDLMTV--AKGLT 287 (459)
T ss_pred hhccCccCchhhhHhhcCC-CCCeEEe--chhhc
Confidence 9988744332222222355 4788887 45544
No 370
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.44 E-value=0.0031 Score=64.74 Aligned_cols=152 Identities=14% Similarity=0.013 Sum_probs=81.8
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR 267 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~ 267 (375)
...|+.+||+||-.|+..||.....+.+ + .++.+|.....-|-...-+..+.+ ..+.
T Consensus 106 ~v~f~~sGseAve~AlklAr~~~~~~g~---~-------~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~ 175 (429)
T PRK06173 106 KIFFADSGSVAVEVAMKMALQYQQAKGE---V-------QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQY 175 (429)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHHHhCC---C-------CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCe
Confidence 5799999999999999999975322100 0 012233444444533222222211 1123
Q ss_pred EEecCCC------CCcCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCcccc----ccHHHHHHHHHhcCCEEEEeccccc
Q psy1596 268 YIESDDK------LSLRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACAF----DNLEELGPICEKEGLWLHVDAAYAG 336 (375)
Q Consensus 268 ~Vp~d~~------g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg 336 (375)
.+|.... ..-+.+.|++.|+.. +..+.+|++.-. ....|.+ +=+++|.++|++||+.+++|.++.|
T Consensus 176 ~~~~p~~~~~~~~~~~~l~~l~~~i~~~---~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG 252 (429)
T PRK06173 176 FLPQPSIKFGEEWNDEAIEPLQDLLEQK---GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATG 252 (429)
T ss_pred EeCCCCcccchhHHHHHHHHHHHHHHhC---CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcC
Confidence 3332110 012466777888632 223444444432 2333443 4599999999999999999999966
Q ss_pred CcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 337 SSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 337 ~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
....-.-+.....|+ ..|.++ .-|.++.-
T Consensus 253 ~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG 281 (429)
T PRK06173 253 FGRTGKLFALEHAGV-VPDIMC--IGKALTGG 281 (429)
T ss_pred CCcCCcchHHHhcCC-CCCEEE--eehhhhCC
Confidence 422211111112355 478777 57776433
No 371
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.35 E-value=0.0035 Score=64.28 Aligned_cols=152 Identities=12% Similarity=0.022 Sum_probs=80.0
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCe-EE----------EE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK-MR----------YI 269 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-v~----------~V 269 (375)
...|+.+|||||-.|+..||....++.+..+... -.++.+|-....-|-...-++.+.+.. .+ .+
T Consensus 105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~----~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 180 (431)
T TIGR03251 105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPA----ALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI 180 (431)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCC----CCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccC
Confidence 4789999999999999999975311000000000 001224444444454444443332211 00 01
Q ss_pred ec-------CCCC-C-------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEE
Q psy1596 270 ES-------DDKL-S-------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHV 330 (375)
Q Consensus 270 p~-------d~~g-~-------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHV 330 (375)
+. +... . -+++++++.++. .+..+.+|++.--....|.+ +-+++|.++|++||+.|++
T Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 257 (431)
T TIGR03251 181 DNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIF 257 (431)
T ss_pred CCCcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 10 0000 0 123444555542 12345666666544445554 6799999999999999999
Q ss_pred ecccccCcccchhhhhhhcCCCcccEEEEc
Q psy1596 331 DAAYAGSSFICPEFRKWLAGVEYANSIAFN 360 (375)
Q Consensus 331 DaA~gg~~~~~~~~~~~~~gie~aDSi~~d 360 (375)
|.++.|....-.-+.....|+ ..|.+++.
T Consensus 258 DEV~tG~GrtG~~~a~~~~gv-~PDi~~~g 286 (431)
T TIGR03251 258 DEVQTGVGLTGTAWAYQQLGV-QPDIVAFG 286 (431)
T ss_pred ecchhccCccchHHHHHhcCC-CCCEEEec
Confidence 999987543211111112344 47877764
No 372
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.23 E-value=0.0044 Score=68.86 Aligned_cols=103 Identities=12% Similarity=-0.045 Sum_probs=68.2
Q ss_pred eEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG 318 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~ 318 (375)
..+++|+..|......++ ..|.+++. ++|++.+.++ .+.|+++.++ ..|.|.|+++|+
T Consensus 169 ~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~~~------~~~v~vq~P~-~~G~i~d~~~i~ 230 (954)
T PRK12566 169 NRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAAHA------VFGALLQYPD-THGEIRDLRPLI 230 (954)
T ss_pred CEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCCCC------EEEEEEECCC-CceEEccHHHHH
Confidence 368999999988776653 23445443 3344433222 5678888874 689999999999
Q ss_pred HHHHhcCCEEEEecccccC--cccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 319 PICEKEGLWLHVDAAYAGS--SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 319 ~ia~~~~iwlHVDaA~gg~--~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
+++++.|..+. +++--.+ .+-.| |=-.||-+ +.-++-+++|++-|
T Consensus 231 ~~~h~~gal~~-~~~d~laL~ll~~P-------ge~GADI~-vG~~Q~fGvp~~~G 277 (954)
T PRK12566 231 DQLHGQQALAC-VAADLLSLLVLTPP-------GELGADVV-LGSTQRFGVPMGYG 277 (954)
T ss_pred HHHHHcCCEEE-EEeCHHHHhCCCCh-------hhcCCcEE-eeCCCcCCCCCCCC
Confidence 99999998744 5543332 22222 11147877 77788889998866
No 373
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.15 E-value=0.0096 Score=61.41 Aligned_cols=156 Identities=13% Similarity=0.024 Sum_probs=82.1
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCe-E----------EE
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK-M----------RY 268 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-v----------~~ 268 (375)
....|+++|||||-.|+..||.+...+....+... . .++.+|-....-|-...-+..+.+.. . ..
T Consensus 111 ~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~--~--~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~ 186 (443)
T PRK08297 111 PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDP--A--LGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPR 186 (443)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCC--C--CCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccc
Confidence 35799999999999999999875321100000000 0 01224444444454444343333210 0 01
Q ss_pred EecC-CCC---C-----------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEE
Q psy1596 269 IESD-DKL---S-----------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLH 329 (375)
Q Consensus 269 Vp~d-~~g---~-----------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlH 329 (375)
+|.. ..+ . -+++++++.|.+. +..+.+|++.---...|.+ +-+++|.++|++||+.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI 263 (443)
T PRK08297 187 IDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH---PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLI 263 (443)
T ss_pred cCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC---CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 1110 000 0 0234556666532 2235566655433344554 779999999999999999
Q ss_pred EecccccCcccchhhhhhhcCCCcccEEEEcCcccC
Q psy1596 330 VDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWL 365 (375)
Q Consensus 330 VDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l 365 (375)
+|..+.|....-.-+.....++ ..|-+++ -|.+
T Consensus 264 ~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l 296 (443)
T PRK08297 264 FDEVQTGVGLTGTAWAYQQLGV-RPDIVAF--GKKT 296 (443)
T ss_pred EechhhccCccchHHHHHhcCC-CCCEEEe--cccc
Confidence 9999977533211111112244 4687775 6654
No 374
>KOG1358|consensus
Probab=97.01 E-value=0.003 Score=63.23 Aligned_cols=117 Identities=8% Similarity=0.044 Sum_probs=84.7
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhh----hcCC---ccEEEEEEcCCCCccccccH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDK----KKHL---IPFFVCGTLGTTGACAFDNL 314 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~----~~g~---~p~~Vv~t~GtT~tGavDpl 314 (375)
++++++.+..+..+.++.++..-.++....+ |++.||+.+.+.. ++.+ .-.+||+..-.-++|.+-|+
T Consensus 178 GDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl 252 (467)
T KOG1358|consen 178 GDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPL 252 (467)
T ss_pred CcEEEEehhhhHHHHHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCccccc
Confidence 5689999999999999999988888888765 7788887774422 2222 13467777777889999999
Q ss_pred HHHHHHHHhcCCEEEEecccccCcccch--h-hhhhhcCCCcccEEEEcCcc
Q psy1596 315 EELGPICEKEGLWLHVDAAYAGSSFICP--E-FRKWLAGVEYANSIAFNPSK 363 (375)
Q Consensus 315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~-~~~~~~gie~aDSi~~d~HK 363 (375)
.+|.++..||...+++|..|..+.+-.- . -.|.--+++..|-++.+.--
T Consensus 253 ~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ 304 (467)
T KOG1358|consen 253 PEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMET 304 (467)
T ss_pred HHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccc
Confidence 9999999999999999999988754210 0 01111234556777666543
No 375
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=96.92 E-value=0.036 Score=57.10 Aligned_cols=143 Identities=15% Similarity=0.044 Sum_probs=81.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
.++.+.|+++..-. +=....||+|||+|+=+|+..++++...+-+ ..+-
T Consensus 90 ~~LA~~L~~~aP~~--------------------~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~-----------p~r~ 138 (449)
T COG0161 90 IELAEKLAELAPEG--------------------GLDHVFFTDSGSEAVETALKMALQYWRARGQ-----------PQRK 138 (449)
T ss_pred HHHHHHHHHhCCCC--------------------CccEEEEeCCchHHHHHHHHHHHHHHHhcCC-----------Ccce
Confidence 66777788876511 1135799999999999999999987644211 1122
Q ss_pred EEEec-CCCchHHHHHHHHcC-------------CeEEEEecCC------CCCcC------HHHHHHHHHHhhhcCCccE
Q psy1596 244 VAYCS-DQAHSSVEKAGLIGL-------------VKMRYIESDD------KLSLR------GDKLIEAIERDKKKHLIPF 297 (375)
Q Consensus 244 vV~~S-~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~------~g~md------~e~Le~aI~~~~~~g~~p~ 297 (375)
.++.= ..-|-+..-++.+++ ..+..+|.-. .+.-+ .++||+.|.+.-. ....
T Consensus 139 ~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~--~~IA 216 (449)
T COG0161 139 KFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGP--ETIA 216 (449)
T ss_pred EEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCc--ccEE
Confidence 23333 333544444444433 1122333211 11122 4566666665321 1233
Q ss_pred EEEEEcCCCC-cccc----ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596 298 FVCGTLGTTG-ACAF----DNLEELGPICEKEGLWLHVDAAYAGSSF 339 (375)
Q Consensus 298 ~Vv~t~GtT~-tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~ 339 (375)
++++-----. .|.+ .=++++.+||++||+.|+.|..-.|+..
T Consensus 217 AfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGR 263 (449)
T COG0161 217 AFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGR 263 (449)
T ss_pred EEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCc
Confidence 3333321112 3333 2399999999999999999998877654
No 376
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=96.76 E-value=0.0091 Score=58.12 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=61.8
Q ss_pred CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcc--cchhhhhhhc
Q psy1596 275 LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSF--ICPEFRKWLA 349 (375)
Q Consensus 275 g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~--~~~~~~~~~~ 349 (375)
+++|.++|+-- +. .-+|+++-+|++||.| +.+..|.++|++||+++++|-|||-..- +..+......
T Consensus 167 Y~vDF~~l~i~--e~------~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~ 238 (417)
T COG3977 167 YHVDFEHLHIG--ES------TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWN 238 (417)
T ss_pred eccCHHHcccc--cc------cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCC
Confidence 56787777532 22 3389999999999998 6788888999999999999999998642 1111111111
Q ss_pred CCCcccEEEEcCcccCCCCCcceee
Q psy1596 350 GVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 350 gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
. ---.|+|..|.++----||++
T Consensus 239 ~---NiilC~SLSK~GLPG~R~GIi 260 (417)
T COG3977 239 E---NIILCMSLSKLGLPGSRCGII 260 (417)
T ss_pred C---CEEEEeehhhcCCCCcceeEE
Confidence 1 134688999977655667764
No 377
>KOG2467|consensus
Probab=96.72 E-value=0.0094 Score=59.37 Aligned_cols=171 Identities=14% Similarity=0.044 Sum_probs=107.9
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe--CChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596 159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ--TTASESTLICLLAGRTEAIRKYQQSHPELEH 236 (375)
Q Consensus 159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft--sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~ 236 (375)
.+++|.-+.+.--++||++ +..|||-+ -+||-||+..-.+..... . +
T Consensus 84 ID~iE~LCq~RALeaF~ld--------------------p~kWGVNVQp~SGSPANfavYtall~Ph-~----R------ 132 (477)
T KOG2467|consen 84 IDQIELLCQKRALEAFGLD--------------------PEKWGVNVQPYSGSPANFAVYTALLKPH-E----R------ 132 (477)
T ss_pred HHHHHHHHHHHHHHHhCCC--------------------HHHCceeeccCCCCchhhHHHhhhcCCC-C----e------
Confidence 4566777888888999998 23445543 488999987665543211 0 0
Q ss_pred hhhcCceEEEecCCCchHHHHH---HHHcCC----eEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596 237 AEINSRLVAYCSDQAHSSVEKA---GLIGLV----KMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA 308 (375)
Q Consensus 237 ~~~~~~~vV~~S~~aH~Sv~ka---a~lg~~----~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t 308 (375)
-+-+-.++-.|.|---. -.+... +-.+..+| ..|-+|-|.||+.-... +|.++| +|++..
T Consensus 133 -----iMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY 200 (477)
T KOG2467|consen 133 -----IMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF-----RPKLII--AGTSAY 200 (477)
T ss_pred -----eeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc-----CCcEEE--eccccc
Confidence 01122333344332111 011111 11122344 57899999999876543 365554 466777
Q ss_pred cccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596 309 CAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375 (375)
Q Consensus 309 GavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~ 375 (375)
.-.-|...+.+||.+.|.+|.+|-||-.+..... ..-..+|+||-|+...||.|-.|-+.=+||
T Consensus 201 ~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~---vipsPFey~DiVTTTTHKsLRGPRg~mIFy 264 (477)
T KOG2467|consen 201 SRLIDYARFRKIADKVGAYLMADMAHISGLVAAG---VIPSPFEYCDIVTTTTHKSLRGPRGAMIFY 264 (477)
T ss_pred hhhccHHHHHHHHHhcCceeehhhhhHHHHHhcc---cCCCcccccceeeccccccccCCcceeEEE
Confidence 7777899999999999999999999855432111 011246899999999999999998765554
No 378
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=96.71 E-value=0.021 Score=57.48 Aligned_cols=147 Identities=10% Similarity=0.001 Sum_probs=85.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
-++.+.+++++|.+. .-++..|-|.-|++--..++....+-.+. ..-|.. .++.
T Consensus 72 pe~r~l~a~llgv~~----------------------~~viv~gNSSL~lM~d~i~~a~~~G~~~~-~~PW~~---~~~v 125 (425)
T PF12897_consen 72 PEARELFAELLGVPP----------------------ENVIVGGNSSLNLMHDTISRAMLHGVPGS-ETPWCK---EEKV 125 (425)
T ss_dssp HHHHHHHHHHHTS-G----------------------GGEEE-SS-HHHHHHHHHHHHHHH--TT--SS-GGG---SS--
T ss_pred HHHHHHHHHHhCCCH----------------------HHEEEeccchHHHHHHHHHHHHhcCCCCC-CCCchh---ccCc
Confidence 678999999999983 12555555555555444444433221111 011211 2456
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPI 320 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~i 320 (375)
..+|+...+---..-+...|.+.+.||.+++| .|+|.+|+.+.+|..- +-+.+|.+ -+|++|.+ +-+++++.+
T Consensus 126 KfLCPvPGYDRHFai~E~~Giemi~VpM~~dG-PDmD~Ve~LV~~D~sv--KGiWcVP~-ySNPtG~tySde~vrrlA~m 201 (425)
T PF12897_consen 126 KFLCPVPGYDRHFAITEHFGIEMIPVPMTEDG-PDMDMVEELVAEDPSV--KGIWCVPK-YSNPTGITYSDEVVRRLAAM 201 (425)
T ss_dssp EEEEEES--HHHHHHHHHCT-EEEEEEEETTE-E-HHHHHHHTHTSTTE--EEEEE-SS-S-TTT-----HHHHHHHHHS
T ss_pred eEEecCCCchHHHHHHHhhCcEEEecCCCCCC-CCHHHHHHHHhcCCcc--ceEEeCCC-ccCCCCccCCHHHHHHHhcC
Confidence 78999888666666667789999999998888 8999999999876542 11244444 46888887 446666666
Q ss_pred -HHhcCCEEEEecccccCccc
Q psy1596 321 -CEKEGLWLHVDAAYAGSSFI 340 (375)
Q Consensus 321 -a~~~~iwlHVDaA~gg~~~~ 340 (375)
....++.|.=|-||+...+.
T Consensus 202 ~~AA~DFRI~WDNAY~vHhL~ 222 (425)
T PF12897_consen 202 KTAAPDFRIFWDNAYAVHHLY 222 (425)
T ss_dssp --SSTT-EEEEE-TTTT-BSS
T ss_pred CcCCcCeEEEeecCceEeecc
Confidence 34579999999999998774
No 379
>KOG0633|consensus
Probab=96.61 E-value=0.0064 Score=58.13 Aligned_cols=90 Identities=18% Similarity=0.062 Sum_probs=69.3
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
.|+.-..+++-..-.+.+.++.++.+|.+.++.||+|++-+.++.+.+ +.++.+|.+.+++|++-..+.|-+|.+-
T Consensus 113 KIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di~KiLe~ 188 (375)
T KOG0633|consen 113 KILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDILKILEM 188 (375)
T ss_pred ceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHHHHHHhC
Confidence 455444543222223457788999999999999999999999988754 6789999999999999777777777765
Q ss_pred c-CCEEEEecccccC
Q psy1596 324 E-GLWLHVDAAYAGS 337 (375)
Q Consensus 324 ~-~iwlHVDaA~gg~ 337 (375)
- |..+.||.||--+
T Consensus 189 p~nglVVvDEAYidF 203 (375)
T KOG0633|consen 189 PDNGLVVVDEAYIDF 203 (375)
T ss_pred CCCcEEEEeeeeEee
Confidence 3 7889999998543
No 380
>KOG1401|consensus
Probab=96.34 E-value=0.12 Score=52.19 Aligned_cols=127 Identities=17% Similarity=0.088 Sum_probs=79.0
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEE
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMR 267 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~ 267 (375)
....|..+||+||-.||..||.....+. +. + +--+|..-..-|--..-++...+. .+.
T Consensus 117 ~rvff~nsGTeAne~ALK~Ark~~~~~~----~~---~---~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~ 186 (433)
T KOG1401|consen 117 ERVFFCNSGTEANETALKFARKFTGKKH----PE---K---KTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVV 186 (433)
T ss_pred cEEEEecCCcHHHHHHHHHHHHhhcccC----Cc---c---ceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCcee
Confidence 4588999999999999999997542211 10 0 112455555555433333332111 112
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--cc--HHHHHHHHHhcCCEEEEecccccCcccchh
Q psy1596 268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--DN--LEELGPICEKEGLWLHVDAAYAGSSFICPE 343 (375)
Q Consensus 268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--Dp--l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~ 343 (375)
..+. -|+.+|++.++..... ..+|++--..-.-|.+ || +..|..+|+++++.|+-|..+.|.....+.
T Consensus 187 ~~~y-----nd~t~l~k~~~~h~~~---IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~ 258 (433)
T KOG1401|consen 187 TAEY-----NDSTALEKLFESHKGE---IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYG 258 (433)
T ss_pred eccc-----CCHHHHHHHHHhCCCc---eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchH
Confidence 2222 2689999999875421 4456666555455544 44 788999999999999999999886555443
Q ss_pred h
Q psy1596 344 F 344 (375)
Q Consensus 344 ~ 344 (375)
.
T Consensus 259 ~ 259 (433)
T KOG1401|consen 259 W 259 (433)
T ss_pred H
Confidence 3
No 381
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=96.06 E-value=0.22 Score=50.02 Aligned_cols=149 Identities=11% Similarity=0.037 Sum_probs=89.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE---eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF---QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 240 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf---tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~ 240 (375)
+.+.+-.++.||.+ + .++ -.+||-|+.++|.....
T Consensus 57 d~le~iyA~vfgaE---------~--------------ALVRpq~vSGTHAi~~~Lfg~Lr------------------- 94 (403)
T PF06838_consen 57 DKLERIYADVFGAE---------D--------------ALVRPQFVSGTHAIALALFGVLR------------------- 94 (403)
T ss_dssp HHHHHHHHHHCT-S---------E--------------EEEETTS-SHHHHHHHHHHHH---------------------
T ss_pred HHHHHHHHHHhCch---------h--------------hhhcccccchHHHHHHHHHhcCC-------------------
Confidence 45556688999887 1 222 14789999888876543
Q ss_pred Cce-EEEecCCCchHHHHHHHH----------cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc--CCC-
Q psy1596 241 SRL-VAYCSDQAHSSVEKAGLI----------GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL--GTT- 306 (375)
Q Consensus 241 ~~~-vV~~S~~aH~Sv~kaa~l----------g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~--GtT- 306 (375)
|++ .++++..-+-.+.+..-+ .|++.+.||..++|.+|.+.++++|++.++ +|...= |-+
T Consensus 95 pGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk------~v~IQRSrGYs~ 168 (403)
T PF06838_consen 95 PGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTK------MVLIQRSRGYSW 168 (403)
T ss_dssp TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEE------EEEEE-S-TTSS
T ss_pred CCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhccCce------EEEEecCCCCCC
Confidence 223 344555556666666522 256789999999999999999999986543 444332 222
Q ss_pred -CccccccHHHHHHHHHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596 307 -GACAFDNLEELGPICEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 307 -~tGavDpl~eI~~ia~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~ 366 (375)
..=.++.|++++++.|+. ++++.||-+||=+.-... ..-- .||-+.=|.=|..+
T Consensus 169 R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E---P~~v---GADl~aGSLIKNpG 225 (403)
T PF06838_consen 169 RPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE---PTEV---GADLMAGSLIKNPG 225 (403)
T ss_dssp S----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS----GGGG---T-SEEEEETTSGGG
T ss_pred CCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC---cccc---chhheeccceeCCC
Confidence 223568899999988875 789999999998642211 1112 47999999998754
No 382
>KOG1404|consensus
Probab=95.95 E-value=0.039 Score=55.45 Aligned_cols=121 Identities=12% Similarity=-0.018 Sum_probs=71.8
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec---------
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--------- 271 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--------- 271 (375)
...|+++|||||=+||+.||.+... -..|-....-|-+-.-++-+.+...++-+.
T Consensus 111 ~vfF~nsGsEANelal~mar~Yt~~----------------~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~ 174 (442)
T KOG1404|consen 111 VVFFVNSGSEANELALKMARLYTGN----------------LDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHH 174 (442)
T ss_pred EEEEecCCchHHHHHHHHHHHhcCC----------------ceEEEeeccccCCchhhcccccCCcccccCCCCCCcccc
Confidence 4799999999999999999986311 123333444454444444443322221111
Q ss_pred ----C--------CC----CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596 272 ----D--------DK----LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD 331 (375)
Q Consensus 272 ----d--------~~----g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD 331 (375)
| ++ +.--.+.|+..|..+.... +.+.++..-....|.+.+ +++..++|+++|..++.|
T Consensus 175 ~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~--vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaD 252 (442)
T KOG1404|consen 175 TMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPET--VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIAD 252 (442)
T ss_pred cCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCc--eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEeh
Confidence 1 00 0001244555555554432 334444433334477764 899999999999999999
Q ss_pred cccccCcc
Q psy1596 332 AAYAGSSF 339 (375)
Q Consensus 332 aA~gg~~~ 339 (375)
.++.|...
T Consensus 253 EVqtGfGR 260 (442)
T KOG1404|consen 253 EVQTGFGR 260 (442)
T ss_pred hhhhcccc
Confidence 99988654
No 383
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=95.74 E-value=0.59 Score=51.95 Aligned_cols=80 Identities=10% Similarity=0.004 Sum_probs=46.8
Q ss_pred HHHHHHHHHhh--hcCCccEEEEEEcC-CCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC
Q psy1596 280 DKLIEAIERDK--KKHLIPFFVCGTLG-TTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE 352 (375)
Q Consensus 280 e~Le~aI~~~~--~~g~~p~~Vv~t~G-tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie 352 (375)
+.|++.|++.. +.+....+|++.-. ....|.+ +=+++|.++|++||+.|+.|..+.|+...-..+.....|+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 45666665421 11223444444321 1223444 3389999999999999999999998755433322223344
Q ss_pred cccEEEEc
Q psy1596 353 YANSIAFN 360 (375)
Q Consensus 353 ~aDSi~~d 360 (375)
..|.+++.
T Consensus 646 ~PDIi~~g 653 (817)
T PLN02974 646 KPDIACYA 653 (817)
T ss_pred CCCEEeec
Confidence 36776664
No 384
>KOG1402|consensus
Probab=95.00 E-value=0.13 Score=50.86 Aligned_cols=132 Identities=17% Similarity=0.170 Sum_probs=79.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 243 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~ 243 (375)
-+..+.+.++||++. .+=+.+|.||+=+|+..||.+..... ++..+.
T Consensus 104 ~~f~~~vt~lf~~~k-----------------------vlpmnTGaEa~Eta~KLaR~wgy~~K----------~ip~nk 150 (427)
T KOG1402|consen 104 GEFAEYVTKLFGYDK-----------------------VLPMNTGAEAVETACKLARKWGYRKK----------NIPKNK 150 (427)
T ss_pred HHHHHHHHHhcCcce-----------------------eeecccchhHHHHHHHHHHHHHHhhc----------cCCccc
Confidence 566788999999982 23466779999999999996532211 011011
Q ss_pred --EEEecCCCch-------------HHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596 244 --VAYCSDQAHS-------------SVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA 308 (375)
Q Consensus 244 --vV~~S~~aH~-------------Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t 308 (375)
++.+-..-|- |..+---+.-..+..||-+ |.++|+.+++... ..-|+|=...| +.
T Consensus 151 a~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~~~---vaaFivEPIQG--Ea 220 (427)
T KOG1402|consen 151 AKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKSPN---VAAFIVEPIQG--EA 220 (427)
T ss_pred eeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----CHHHHHHHhcCCC---eeEEEeecccc--cc
Confidence 1111112221 2211110111125566654 8899999998631 12233333333 56
Q ss_pred cccc----cHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 309 CAFD----NLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 309 GavD----pl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
|.+- -|++..++|.+||+.++.|..+.|-+
T Consensus 221 GVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~ 254 (427)
T KOG1402|consen 221 GVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLA 254 (427)
T ss_pred ceEeCCchhHHHHHHHHHhhcEEEEehhhhhccc
Confidence 6662 39999999999999999999998854
No 385
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=93.67 E-value=3.7 Score=41.56 Aligned_cols=146 Identities=12% Similarity=-0.004 Sum_probs=94.4
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec-C-CCCCc
Q psy1596 200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES-D-DKLSL 277 (375)
Q Consensus 200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d-~~g~m 277 (375)
..++=|.|||-|+-++.-..... .++..|++|+++......-..-.|.++..-|- | +...+
T Consensus 95 v~t~Qt~GGTGAL~~~A~fl~~~-----------------~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~ 157 (396)
T COG1448 95 VATVQTLGGTGALRVAADFLARF-----------------FPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGL 157 (396)
T ss_pred HhheecCCcchHHHHHHHHHHHh-----------------CCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccc
Confidence 45678899999987665443321 13446999999865444333456778887775 3 34459
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccchh----hhhhhcC
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICPE----FRKWLAG 350 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~----~~~~~~g 350 (375)
|.+.+-..|++..+ |. +++.=-+..|+||.- +..++|+++.++.++.-.+|=||=|++-=..+ .|.....
T Consensus 158 df~~mla~L~~a~~-~~--vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~ 234 (396)
T COG1448 158 DFDGMLADLKTAPE-GS--VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEV 234 (396)
T ss_pred cHHHHHHHHHhCCC-CC--EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHh
Confidence 99999888887543 22 233333356788864 67889999999999999999999776432221 1222222
Q ss_pred CCcccEEEEcCcccCC
Q psy1596 351 VEYANSIAFNPSKWLM 366 (375)
Q Consensus 351 ie~aDSi~~d~HK~l~ 366 (375)
.. -=.++.|+.|.++
T Consensus 235 ~~-~~lva~S~SKnfg 249 (396)
T COG1448 235 GP-ELLVASSFSKNFG 249 (396)
T ss_pred CC-cEEEEehhhhhhh
Confidence 11 1457778888654
No 386
>KOG1405|consensus
Probab=91.33 E-value=0.64 Score=46.52 Aligned_cols=83 Identities=16% Similarity=0.118 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEc----CCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC-
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTL----GTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE- 352 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~----GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie- 352 (375)
.++.+|+.|.+..++......+++.- |.-..++-|=+..+.+|+++|++-++||..+-|+...-.-+.|-..+++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 45678888887765544444444433 3333445577999999999999999999999776543222222222332
Q ss_pred cccEEEEc
Q psy1596 353 YANSIAFN 360 (375)
Q Consensus 353 ~aDSi~~d 360 (375)
-+|.+||+
T Consensus 334 PpD~vTFS 341 (484)
T KOG1405|consen 334 PPDVVTFS 341 (484)
T ss_pred Cccceehh
Confidence 26777776
No 387
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=90.43 E-value=0.66 Score=41.04 Aligned_cols=46 Identities=9% Similarity=0.212 Sum_probs=35.2
Q ss_pred cchhHHHHHHHHHHHHHcC--CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHH
Q psy1596 157 LDRDKYSSKVLDFVSKENA--TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRT 221 (375)
Q Consensus 157 ~g~~~le~~v~~wLa~llG--~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~ 221 (375)
.|..++++++.+|+.+.+| .+. ++...++|+|++.++..++.+..+
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~-------------------~pd~Ivvt~Ga~~al~~l~~~l~d 139 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKF-------------------DADMIVLSAGATAANEIIMFCIAD 139 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCcc-------------------chhheEEcCCHHHHHHHHHHHHcC
Confidence 4677788999999999988 332 334689999999998877766543
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=90.17 E-value=3.3 Score=40.77 Aligned_cols=88 Identities=14% Similarity=0.154 Sum_probs=61.5
Q ss_pred EEEecCCCchHHHHHHHH----------cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC-----Cc
Q psy1596 244 VAYCSDQAHSSVEKAGLI----------GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT-----GA 308 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~l----------g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT-----~t 308 (375)
.+++...-+-.+++..-+ .++.-+.||...+|++|.+.++.+|++.++ ++..--+. +.
T Consensus 110 ll~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tk-------li~IQRS~GY~~RpS 182 (416)
T COG4100 110 LLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTK-------LIGIQRSKGYAWRPS 182 (416)
T ss_pred EEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcCccce-------EEEEEeccCcCCCCc
Confidence 355555555666665422 245678889888999999999999987653 33332222 23
Q ss_pred cccccHHHHHHHHHhc--CCEEEEecccccCc
Q psy1596 309 CAFDNLEELGPICEKE--GLWLHVDAAYAGSS 338 (375)
Q Consensus 309 GavDpl~eI~~ia~~~--~iwlHVDaA~gg~~ 338 (375)
=.+++|+++..+.|+- |+.+.||-+||-+.
T Consensus 183 ~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFv 214 (416)
T COG4100 183 LSIAEIEEMITFVKEINPNVIVFVDNCYGEFV 214 (416)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEEeccchhhh
Confidence 4578899999888875 68999999999863
No 389
>KOG2040|consensus
Probab=86.31 E-value=13 Score=40.30 Aligned_cols=108 Identities=11% Similarity=-0.027 Sum_probs=61.0
Q ss_pred EEEecCCCchHHHHHHH--HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596 244 VAYCSDQAHSSVEKAGL--IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321 (375)
Q Consensus 244 vV~~S~~aH~Sv~kaa~--lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia 321 (375)
.++++...|.-....++ -.+..+. |.+ .|+ +++-... .....|++..+.| .|.+-+.+++++.+
T Consensus 207 k~vvd~~~hpqtlsV~~TRa~~~~i~-v~~-----~~~---~~~~~s~----~~v~gvlvQYP~t-~G~i~d~~el~~~a 272 (1001)
T KOG2040|consen 207 KFVVDSNCHPQTLSVVKTRAKGFGIK-VVV-----SDI---KEADYSS----KDVSGVLVQYPDT-EGSVLDFDELVELA 272 (1001)
T ss_pred eEEecCCCCcchhhhhhcccccccee-EEe-----cCH---HHhhccc----cceeEEEEEcCCC-CCcccCHHHHHHHh
Confidence 47889999987766654 2232332 211 122 1211111 1245788888865 58999999999999
Q ss_pred HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596 322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT 372 (375)
Q Consensus 322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g 372 (375)
++.+..+.+---.-+-.++-|- |==.||-..=+... +++|.|-|
T Consensus 273 ~~~~s~vv~atDLLaLtiLrpP------gefGaDIavGSsQR-FGVPlGYG 316 (1001)
T KOG2040|consen 273 HANGSLVVMATDLLALTILRPP------GEFGADIAVGSSQR-FGVPLGYG 316 (1001)
T ss_pred hccCceEEEeehhhHHHccCCh------hhcCceeeeccccc-cCccccCC
Confidence 9988765432111111111110 11136877777777 46898865
No 390
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=82.70 E-value=22 Score=35.09 Aligned_cols=120 Identities=13% Similarity=0.038 Sum_probs=72.2
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCC
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLS 276 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~ 276 (375)
.-++|-||.+||.+...+|..+++. =+.+.++-...-.-..++- .+.|..++.++...+..
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~lG---------------l~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~ 129 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAKLG---------------LKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIG 129 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHhcC---------------CcEEEEEeccccccccccchhhhhhcCceEEEecCCCChh
Confidence 4699999999999877777654321 1345555444410011111 24577888887655553
Q ss_pred cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc---cccccHHHHHHHHHh-cCCEEEEecccccC
Q psy1596 277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA---CAFDNLEELGPICEK-EGLWLHVDAAYAGS 337 (375)
Q Consensus 277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t---GavDpl~eI~~ia~~-~~iwlHVDaA~gg~ 337 (375)
++. .+++..++-+++|.+|+ |+.--|++.. |-++=..||..-+++ ..+-..|.++=+++
T Consensus 130 ~~~-~~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~g 192 (323)
T COG2515 130 INA-SAEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSGG 192 (323)
T ss_pred hch-hhHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCcc
Confidence 332 23333344445677885 5666677774 556777888888887 56666777765554
No 391
>KOG1412|consensus
Probab=76.54 E-value=26 Score=34.84 Aligned_cols=122 Identities=9% Similarity=0.047 Sum_probs=79.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-CeEEEEec--CCC
Q psy1596 198 PPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-VKMRYIES--DDK 274 (375)
Q Consensus 198 ~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-~~v~~Vp~--d~~ 274 (375)
+...|+-+-+||.|+..+.--.-..+ .+-.||+|..+.-.-..-..-.| ..+..-+- .++
T Consensus 98 ~Rv~~vQslsGTGAl~~~A~Fl~~~~-----------------~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~ 160 (410)
T KOG1412|consen 98 DRVFGVQSLSGTGALRIAADFLATFY-----------------NKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAEN 160 (410)
T ss_pred ccccceeeccccchhhhhHHHHHHhc-----------------ccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCC
Confidence 44568888899999876654322211 23369999998666555554334 34444443 355
Q ss_pred CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc---cccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596 275 LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA---FDNLEELGPICEKEGLWLHVDAAYAGSSF 339 (375)
Q Consensus 275 g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa---vDpl~eI~~ia~~~~iwlHVDaA~gg~~~ 339 (375)
-.+|.+.+-..|+...+ | -++|+-.+..++||. -.-..+|+++.++.++.-.-|-||=|++-
T Consensus 161 k~~d~e~~Lsdl~~APe-~--si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfAS 225 (410)
T KOG1412|consen 161 KCVDLEGFLSDLESAPE-G--SIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFAS 225 (410)
T ss_pred ceecHHHHHHHHhhCCC-C--cEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhccccc
Confidence 67899888888876543 2 223333334566763 24467899999999999999999988763
No 392
>KOG3846|consensus
Probab=70.09 E-value=14 Score=36.59 Aligned_cols=111 Identities=16% Similarity=0.128 Sum_probs=79.1
Q ss_pred CCCchHHHHHHHHcCCe----EEEEec-CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 249 DQAHSSVEKAGLIGLVK----MRYIES-DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 249 ~~aH~Sv~kaa~lg~~~----v~~Vp~-d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
...||.++.-+++.|.. .+.|.. +..-.+..+++-+.|++. |....+|+.+...-.||..=+|.+|..--+.
T Consensus 166 PSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkn---gDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~ 242 (465)
T KOG3846|consen 166 PSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKN---GDEIALVCFSGVQYYTGQYFDIGAITFAGQF 242 (465)
T ss_pred CchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhc---CCeEEEEEeecceeecccccchhhhhhcccC
Confidence 35689999989886653 455544 334468888888888764 3345556666566678999999999966666
Q ss_pred cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368 (375)
Q Consensus 324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P 368 (375)
.|+.+=-|=||+.+...+ +-+ ..| +|+.+|..-|.+.+-
T Consensus 243 kgc~VGfDLAHAvgNVpL--~LH-dWg---VDFACWCSYKYlnaG 281 (465)
T KOG3846|consen 243 KGCLVGFDLAHAVGNVPL--QLH-DWG---VDFACWCSYKYLNAG 281 (465)
T ss_pred CCcEechhhhhhhcCCce--EEe-ecC---CceEEEeeecccccC
Confidence 799999999998876532 112 124 599999999987653
No 393
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=68.83 E-value=9.5 Score=36.97 Aligned_cols=61 Identities=15% Similarity=0.050 Sum_probs=38.2
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc---CCEEEE
Q psy1596 270 ESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE---GLWLHV 330 (375)
Q Consensus 270 p~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~---~iwlHV 330 (375)
|.+++|++|.+.+++.++...+.|..-+++..+.|-...=+.+...++.+.+.+. ++++++
T Consensus 11 Pf~~dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 11 HFDADGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 4578899999999999988877775443444343333334456666666655443 355554
No 394
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=67.71 E-value=18 Score=33.24 Aligned_cols=53 Identities=8% Similarity=-0.079 Sum_probs=41.6
Q ss_pred HHHHHHHHHhh-hc-CCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 280 DKLIEAIERDK-KK-HLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 280 e~Le~aI~~~~-~~-g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
++|..++++-. +. ...-++|+.|=|++..|.++|++.-+++++++|+.+|.=|
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 88888887643 21 2234688889999999999999888899999999988644
No 395
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=66.51 E-value=8.4 Score=37.72 Aligned_cols=55 Identities=16% Similarity=0.119 Sum_probs=43.5
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc
Q psy1596 270 ESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324 (375)
Q Consensus 270 p~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~ 324 (375)
|.+++|++|.+++++.++...++|..=++++.|.|-..+=+.+.-.++.+.+.+.
T Consensus 15 PF~~dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~ 69 (299)
T COG0329 15 PFDEDGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEA 69 (299)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHH
Confidence 4566799999999999999888886555666666666677778888888888775
No 396
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=66.49 E-value=9.6 Score=36.61 Aligned_cols=57 Identities=21% Similarity=0.144 Sum_probs=40.9
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc
Q psy1596 268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324 (375)
Q Consensus 268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~ 324 (375)
.-|.+++|++|.+.+++.++...+.|..-+++..+.|-...-+.+...++.+++.++
T Consensus 9 ~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 9 VTPFKDDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 345588999999999999998888886655555454444445567777777766664
No 397
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=65.95 E-value=32 Score=30.67 Aligned_cols=85 Identities=19% Similarity=0.211 Sum_probs=59.4
Q ss_pred CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--ccHHHHHHHHHh-cCC------EEEEecccccCcccchhh
Q psy1596 274 KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--DNLEELGPICEK-EGL------WLHVDAAYAGSSFICPEF 344 (375)
Q Consensus 274 ~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--Dpl~eI~~ia~~-~~i------wlHVDaA~gg~~~~~~~~ 344 (375)
.+.-..+.||..-++...+| ++|.-.+.+..+.- .+-+||.++|+. ||+ .++|-|.-+- |-|
T Consensus 38 GfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~~a~-----PLy 108 (162)
T COG0386 38 GFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVNGKNAH-----PLY 108 (162)
T ss_pred CCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeecCCCCC-----cHH
Confidence 44455689999999988888 57778888888755 468899999986 676 3556554332 445
Q ss_pred hhhhc---CCCcccEEEEcCcccCCC
Q psy1596 345 RKWLA---GVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 345 ~~~~~---gie~aDSi~~d~HK~l~~ 367 (375)
+.+.. |.-....|-||++|+|--
T Consensus 109 ~~L~~~~~g~~~~~~IkWNFtKFLvd 134 (162)
T COG0386 109 KYLKEQKPGKLGGKDIKWNFTKFLVD 134 (162)
T ss_pred HHHHhcCCCCccCCccceeeEEEEEc
Confidence 54432 222358899999998743
No 398
>KOG1403|consensus
Probab=65.42 E-value=8.3 Score=38.07 Aligned_cols=126 Identities=14% Similarity=0.041 Sum_probs=72.6
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHH-----H--cC-C-e---EEE
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-----I--GL-V-K---MRY 268 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~-----l--g~-~-~---v~~ 268 (375)
--+|+.+|||||-+||..||+... .+++|.....-|--+..-+. + ++ . + +..
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftk----------------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHV 167 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTK----------------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHV 167 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcc----------------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEe
Confidence 368999999999999999998531 12344444333322222111 1 11 1 1 111
Q ss_pred EecC---------------CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEE
Q psy1596 269 IESD---------------DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLH 329 (375)
Q Consensus 269 Vp~d---------------~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlH 329 (375)
-|+- +.+..=.+.+++.++....+|....+.++..-.+--|.| +-+.++++-.+.+|-.++
T Consensus 168 APcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~I 247 (452)
T KOG1403|consen 168 APCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCI 247 (452)
T ss_pred cCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEE
Confidence 2221 122333467788887666655443333333322223444 447788888899999999
Q ss_pred EecccccCcccch
Q psy1596 330 VDAAYAGSSFICP 342 (375)
Q Consensus 330 VDaA~gg~~~~~~ 342 (375)
.|..+-|+..+-.
T Consensus 248 aDEVQvGFGRvG~ 260 (452)
T KOG1403|consen 248 ADEVQVGFGRVGS 260 (452)
T ss_pred eehhhhcccccch
Confidence 9999988765543
No 399
>PLN02417 dihydrodipicolinate synthase
Probab=63.28 E-value=15 Score=35.51 Aligned_cols=55 Identities=11% Similarity=-0.049 Sum_probs=38.3
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
-|.|++|.+|.+.+++.++...++|..-+++..|.|-..+=+.+...++.+.+.+
T Consensus 11 TPf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~ 65 (280)
T PLN02417 11 TPYLPDGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVN 65 (280)
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHH
Confidence 3558899999999999999888877654445555554444455666666665554
No 400
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=63.10 E-value=11 Score=36.33 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=40.0
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc
Q psy1596 268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324 (375)
Q Consensus 268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~ 324 (375)
..|.+++|++|.+.+++.++...+.|..-+++..+.|-...=+.+.-.++.+.+.+.
T Consensus 7 ~TPf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 7 ITPFKEDGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred eCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 346688999999999999998888786655554555544444557777777766553
No 401
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=63.03 E-value=15 Score=35.98 Aligned_cols=61 Identities=13% Similarity=0.021 Sum_probs=38.0
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc---CCEEEE
Q psy1596 270 ESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE---GLWLHV 330 (375)
Q Consensus 270 p~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~---~iwlHV 330 (375)
|.+++|++|.+.|++.|+...++|..-+++..|.|-..+=+.+.-.++.+.+.+. .+.+++
T Consensus 18 Pf~~dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 18 PFDADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5588899999999999998877775433333333333333445566666655443 355554
No 402
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=63.00 E-value=28 Score=35.05 Aligned_cols=152 Identities=15% Similarity=-0.011 Sum_probs=85.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE-eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596 164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 242 (375)
Q Consensus 164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf-tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~ 242 (375)
.++++.++++|++|. .-...| ..|+|...-++.+...... +.
T Consensus 53 ~~a~~~lreLl~iPd--------------------~Y~VlflqGGat~qf~~~p~nLl~~~-----------------~~ 95 (365)
T COG1932 53 EEAEKDLRELLNIPD--------------------DYKVLFLQGGATGQFAMAPMNLLGKR-----------------GT 95 (365)
T ss_pred HHHHHHHHHHhCCCC--------------------CceEEEEcCccHHHHHHHHHhhhccc-----------------Cc
Confidence 688999999999993 233444 5566666555555433210 00
Q ss_pred eEEEecCCCchHHHHHHHHcC-CeEEEEec--CCCCC-cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-cccHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGL-VKMRYIES--DDKLS-LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-FDNLEEL 317 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~-~~v~~Vp~--d~~g~-md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-vDpl~eI 317 (375)
..+..-..+..+...|-.++. .++..+.. ++.+. .+++..+ +.++ -.+|..+...|.+|. +.+...+
T Consensus 96 ~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~------~ayv~~~~NeTi~Gv~v~~~p~~ 167 (365)
T COG1932 96 DYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDN------DAYVHFCWNETISGVEVPELPDI 167 (365)
T ss_pred eeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCC------ccEEEEecCCcccceEccCCCCC
Confidence 024455555666666666664 33322222 22222 3333332 2211 226888888888886 4443333
Q ss_pred HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l 374 (375)
.. +..+.+|+.-+..+... .+.+.|-|.+...|-++ |-|.+++
T Consensus 168 ~~-----~~~~v~D~SS~ilsr~i--------Dvsk~dviyagaQKnlG-paGltvv 210 (365)
T COG1932 168 GS-----DGLLVADASSAILSRPI--------DVSKYDVIYAGAQKNLG-PAGLTVV 210 (365)
T ss_pred CC-----CceEEEecccHHhcCCC--------ChhHcceEEEehhhccC-ccceEEE
Confidence 22 26889998766654322 23456999999999875 7776654
No 403
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=62.54 E-value=13 Score=35.98 Aligned_cols=57 Identities=16% Similarity=0.056 Sum_probs=39.2
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc
Q psy1596 268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324 (375)
Q Consensus 268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~ 324 (375)
.-|.+++|++|.+.+++.++...+.|..-+++..+.|-...=+.+.-.++.+++.+.
T Consensus 10 ~TPf~~dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 10 VTPFKEDGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred eCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 345588999999999999999888886655554444444444556666676655553
No 404
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=61.09 E-value=12 Score=36.30 Aligned_cols=54 Identities=20% Similarity=0.084 Sum_probs=35.2
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 270 ESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 270 p~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
|.+++|++|.+.+++.++...+.|..-+++..+.|-...-+.+.-.++.+.+.+
T Consensus 16 Pf~~dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~ 69 (296)
T TIGR03249 16 PFDADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVS 69 (296)
T ss_pred CcCCCCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHH
Confidence 557888888888888888877777544444444444444455666666665554
No 405
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=60.59 E-value=14 Score=35.93 Aligned_cols=55 Identities=16% Similarity=0.091 Sum_probs=37.9
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
-|.+++|++|.+.+++.++...++|..-+++..+.|-..+=+.+.-.++.+.+.+
T Consensus 10 TPf~~dg~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~ 64 (294)
T TIGR02313 10 TPFKRNGDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAID 64 (294)
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHH
Confidence 3568899999999999999988887654444444444444455666677665544
No 406
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=59.87 E-value=20 Score=33.21 Aligned_cols=49 Identities=18% Similarity=0.155 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEE
Q psy1596 280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLH 329 (375)
Q Consensus 280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlH 329 (375)
-+-|..+.-.+-+|+.|..|++-.- +..|.....+++.++|++||+.+.
T Consensus 141 GHTEasVdLarlAGl~Pa~VicEi~-~~dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 141 GHTEAAVDLARLAGLKPAGVICEIM-NDDGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred ChHHHHHHHHHHcCCCCcEEEEEEe-CCCccccChHHHHHHHHHcCCcEE
Confidence 4567777777788999988888775 459999999999999999999875
No 407
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=59.83 E-value=13 Score=35.52 Aligned_cols=53 Identities=17% Similarity=0.043 Sum_probs=35.2
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc---ccccHHHHHHHHHhc
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC---AFDNLEELGPICEKE 324 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG---avDpl~eI~~ia~~~ 324 (375)
.|.+++|.+|.+.+++.++...+.|..-+ ...|||..+ +.+...++.+.+.+.
T Consensus 7 TPf~~dg~iD~~~~~~~i~~l~~~Gv~gi---~~~GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 7 TPFTADGEVDLDALRRLVEFLIEAGVDGL---VVLGTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEE---EECCCCcccccCCHHHHHHHHHHHHHH
Confidence 45678899999999999988877775433 344555444 345566666655543
No 408
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=59.78 E-value=18 Score=35.16 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=33.1
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcC-CccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 270 ESDDKLSLRGDKLIEAIERDKKKH-LIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 270 p~d~~g~md~e~Le~aI~~~~~~g-~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
|.+++|++|.+.+++.++...+.| ..-+++..|.|-...=+.+...++.+.+.+
T Consensus 11 Pf~~dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~ 65 (290)
T TIGR00683 11 SFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKD 65 (290)
T ss_pred CCCCCCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHH
Confidence 457888999999999998877776 433333333333333344555566655544
No 409
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=58.03 E-value=79 Score=28.10 Aligned_cols=69 Identities=14% Similarity=0.102 Sum_probs=44.4
Q ss_pred ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia 321 (375)
+..++........+.....+.+.++...+.+ +.++++..|.+..+.|.. +|+... -..++|
T Consensus 79 ~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~-----~~~e~~~~i~~~~~~G~~--viVGg~------------~~~~~A 139 (176)
T PF06506_consen 79 KIAVVGYPNIIPGLESIEELLGVDIKIYPYD-----SEEEIEAAIKQAKAEGVD--VIVGGG------------VVCRLA 139 (176)
T ss_dssp EEEEEEESS-SCCHHHHHHHHT-EEEEEEES-----SHHHHHHHHHHHHHTT----EEEESH------------HHHHHH
T ss_pred cEEEEecccccHHHHHHHHHhCCceEEEEEC-----CHHHHHHHHHHHHHcCCc--EEECCH------------HHHHHH
Confidence 4444444454555666666778888888875 688999999988877732 333332 247889
Q ss_pred HhcCCEEE
Q psy1596 322 EKEGLWLH 329 (375)
Q Consensus 322 ~~~~iwlH 329 (375)
+++|+..+
T Consensus 140 ~~~gl~~v 147 (176)
T PF06506_consen 140 RKLGLPGV 147 (176)
T ss_dssp HHTTSEEE
T ss_pred HHcCCcEE
Confidence 99998644
No 410
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=57.98 E-value=15 Score=35.64 Aligned_cols=55 Identities=13% Similarity=0.155 Sum_probs=37.7
Q ss_pred ecCCCCCcCHHHHHHHHHHhhh-cCCccEEEEEEcCCCCccccccHHHHHHHHHhc
Q psy1596 270 ESDDKLSLRGDKLIEAIERDKK-KHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324 (375)
Q Consensus 270 p~d~~g~md~e~Le~aI~~~~~-~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~ 324 (375)
|.+++|++|.+.+++.++...+ .|..-+++..+.|-...-+.+...++.+.+.+.
T Consensus 14 Pf~~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~ 69 (293)
T PRK04147 14 PFDEDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEE 69 (293)
T ss_pred cCCCCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHH
Confidence 5588999999999999998887 776544444444444444556666777666553
No 411
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=57.17 E-value=26 Score=32.35 Aligned_cols=64 Identities=16% Similarity=0.117 Sum_probs=45.6
Q ss_pred eEEEEecCCCCCcC-HHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEE
Q psy1596 265 KMRYIESDDKLSLR-GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLH 329 (375)
Q Consensus 265 ~v~~Vp~d~~g~md-~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlH 329 (375)
.+.++-..+.|.+. .-+-|.+++-.+..|..|..|++..-+ ..|..-+.+++.+++++|++.+.
T Consensus 121 Hv~Pl~a~~gGvl~R~GhtEaavdLa~lAGl~p~avi~eil~-~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 121 HVFPLRARPGGVLERRGHTEAAVDLARLAGLSPVAVICEILD-DDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp EEEEEEE-TTGGGTSSSHHHHHHHHHHHTTS-SBEEEEEBBE-TTSSBHCHHHHHHHHHHTT-EEE
T ss_pred CCccceecCCcccCCCChHHHHHHHHHHhCCCCcEEEEEEeC-CCCCcCCHHHHHHHHHHcCCcEE
Confidence 34444444544332 345677777777789999988888864 48999999999999999999875
No 412
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=54.60 E-value=16 Score=35.25 Aligned_cols=61 Identities=16% Similarity=0.047 Sum_probs=38.5
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc---CCEEEE
Q psy1596 270 ESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE---GLWLHV 330 (375)
Q Consensus 270 p~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~---~iwlHV 330 (375)
|-+++|.+|.+.+++.++...++|..-+++..+.|-...-+.+.-.+|.+++.++ ++.+.+
T Consensus 12 Pf~~dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 12 PFNADGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp -BETTSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 4578899999999999998888776543333333333333456677777776653 466654
No 413
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=51.21 E-value=36 Score=31.50 Aligned_cols=64 Identities=19% Similarity=0.117 Sum_probs=46.2
Q ss_pred eEEEEecCCCCCc-CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEE
Q psy1596 265 KMRYIESDDKLSL-RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLH 329 (375)
Q Consensus 265 ~v~~Vp~d~~g~m-d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlH 329 (375)
.+.++...+.|-+ ..-+-|.+++-.+-.|..|..|++-.- +..|...+.+++.++|++|++.+.
T Consensus 126 HvfPL~a~~gGvl~R~GhTEaavdL~~lAGl~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 126 HVFPLRAADGGVLTRGGHTEASVDLAELAGLKPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred ccceEEeccCCCcCCCChHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 3444444443332 234567777777778988988888774 458999999999999999999883
No 414
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=49.85 E-value=25 Score=33.93 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=37.7
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCccccccHHHHHHHHHhc---CCEEEE
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAFDNLEELGPICEKE---GLWLHV 330 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~---~iwlHV 330 (375)
-|.+++|++|.+.+++.++...+. |..-+++..+.|-...=+.+.-.++.+.+.+. .+.+++
T Consensus 10 TPf~~dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 10 TPFDENGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 355788999999999999988777 75433343333333333445555666555443 355544
No 415
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=49.01 E-value=33 Score=33.67 Aligned_cols=50 Identities=12% Similarity=0.143 Sum_probs=33.1
Q ss_pred CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 274 KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 274 ~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
+|++|.+.|++.++...++|..-+++..+.|-...=+.+.-.++.+.+.+
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~ 72 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVE 72 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHH
Confidence 48899999999988877777554444444444444455666667666554
No 416
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=47.93 E-value=41 Score=31.74 Aligned_cols=17 Identities=29% Similarity=0.417 Sum_probs=7.6
Q ss_pred cccccHHHHHHHHHhcC
Q psy1596 309 CAFDNLEELGPICEKEG 325 (375)
Q Consensus 309 GavDpl~eI~~ia~~~~ 325 (375)
+.++.|.+|.++|+++|
T Consensus 43 Sh~~Hl~al~~~a~~~g 59 (223)
T PF06415_consen 43 SHIDHLFALIKLAKKQG 59 (223)
T ss_dssp --HHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHcC
Confidence 34455555555555544
No 417
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=46.70 E-value=47 Score=31.24 Aligned_cols=47 Identities=11% Similarity=-0.009 Sum_probs=38.3
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEE
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWL 328 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwl 328 (375)
+-|.+++-.+-.|..|..|++-.- +..|..-+.+++.++|++|++.+
T Consensus 154 HTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~ 200 (218)
T PRK00910 154 HTEGTVDLMQMAGLQPAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPV 200 (218)
T ss_pred ccHHHHHHHHHcCCCceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcE
Confidence 446666666677888988888774 45699999999999999999988
No 418
>PF06620 DUF1150: Protein of unknown function (DUF1150); InterPro: IPR009531 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=45.52 E-value=57 Score=25.49 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=47.9
Q ss_pred HHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCE
Q psy1596 254 SVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLW 327 (375)
Q Consensus 254 Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iw 327 (375)
|...-+.+|..++.+|+. |+.++|.+.+......|..-+. +-.+--+....+|+.+.....++++++-
T Consensus 4 t~~~fa~lg~~~iaYVR~-----v~~~dl~~~~~~~~~~~~~l~A-vh~AdG~~lal~~dR~~Af~~A~q~dl~ 71 (76)
T PF06620_consen 4 TPEDFAALGEGRIAYVRP-----VRVDDLPEEFPPQIDPGETLYA-VHAADGTPLALVDDRDAAFAAARQHDLE 71 (76)
T ss_pred CHHHHHhcCCCcEEEEEE-----echHHhhhhcccccCCCceEEE-EecCCCCEEEEECCHHHHHHHHHHcCCe
Confidence 444455678888999884 7888888888754444443333 3444346778889999999999999863
No 419
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=45.09 E-value=50 Score=31.28 Aligned_cols=50 Identities=18% Similarity=0.077 Sum_probs=39.0
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
+-|..++-.+-.|..|..|++.. -+..|..-+.+++.++|++|++.+ ++.
T Consensus 158 HTEAavdLa~lAGl~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~i-isi 207 (230)
T PRK00014 158 HTEGSVDLAALAGLRPAGVLCEL-MNADGTMMRGASLERYAAKEGLVA-LAI 207 (230)
T ss_pred ccHHHHHHHHHcCCCceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcE-EEH
Confidence 44666665666788898888877 455699999999999999999988 443
No 420
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=44.84 E-value=52 Score=30.86 Aligned_cols=63 Identities=11% Similarity=0.026 Sum_probs=45.0
Q ss_pred eEEEEecCCCCCc-CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEE
Q psy1596 265 KMRYIESDDKLSL-RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWL 328 (375)
Q Consensus 265 ~v~~Vp~d~~g~m-d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwl 328 (375)
.+.++-..+.|-+ ..-+-|..++-.+-.|..|..|++-.- +..|..-+.+++.++|++|++.+
T Consensus 136 HvfPL~a~~gGvl~R~GHTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~ 199 (214)
T PRK01792 136 HVFPLRAANGGVLTRRGHTEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAV 199 (214)
T ss_pred ccceEEeccCCCccCCChHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcE
Confidence 3444444343332 234566777666777888988887774 56699999999999999999998
No 421
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=44.27 E-value=39 Score=32.55 Aligned_cols=55 Identities=20% Similarity=0.128 Sum_probs=37.3
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~ 324 (375)
-|.++ |.+|.+.+++.++...+.|..-+++..+.|-...=+.+...++.+.+.+.
T Consensus 10 TPf~~-g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~ 64 (279)
T cd00953 10 TPFTG-NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDI 64 (279)
T ss_pred cCcCC-CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHH
Confidence 35576 89999999999988888776544555555544445556677777665553
No 422
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=43.52 E-value=56 Score=30.64 Aligned_cols=50 Identities=12% Similarity=0.015 Sum_probs=40.1
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
+-|.+++-.+-.|..|..|++..- +..|...+.+++.++|++||+.+ ++.
T Consensus 153 htEaavdLa~lAgl~P~avi~ei~-~~~G~~~~~~~~~~fA~~~~l~~-v~i 202 (217)
T PRK03353 153 HTEATIDLMTLAGLKPAGVLCELT-NDDGTMARAPECIAFAKQHNMPV-LTI 202 (217)
T ss_pred chHHHHHHHHHcCCCceEEEEEee-cCCCCcccHHHHHHHHHHcCCcE-EEH
Confidence 346667666778888988888773 45699999999999999999998 554
No 423
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=42.57 E-value=90 Score=29.96 Aligned_cols=84 Identities=12% Similarity=-0.044 Sum_probs=56.2
Q ss_pred CCCchHHHHHHHHcCCeEEEEecCCCC-CcCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCccc----cccHHHHHHHHH
Q psy1596 249 DQAHSSVEKAGLIGLVKMRYIESDDKL-SLRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACA----FDNLEELGPICE 322 (375)
Q Consensus 249 ~~aH~Sv~kaa~lg~~~v~~Vp~d~~g-~md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGa----vDpl~eI~~ia~ 322 (375)
...+..+.+++.-. .+++.|.. | -.++++++.+++.-.+.|..- |+.+. |++.... .-|+..|..+.+
T Consensus 108 ~~~n~~LL~~va~t-gkPVilk~---G~~~t~~e~~~A~e~i~~~Gn~~--i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~ 181 (250)
T PRK13397 108 NMQNFEFLKTLSHI-DKPILFKR---GLMATIEEYLGALSYLQDTGKSN--IILCERGVRGYDVETRNMLDIMAVPIIQQ 181 (250)
T ss_pred cccCHHHHHHHHcc-CCeEEEeC---CCCCCHHHHHHHHHHHHHcCCCe--EEEEccccCCCCCccccccCHHHHHHHHH
Confidence 33456666654222 24555543 4 689999999999877777643 33344 5443332 457888888888
Q ss_pred hcCCEEEEecccccCc
Q psy1596 323 KEGLWLHVDAAYAGSS 338 (375)
Q Consensus 323 ~~~iwlHVDaA~gg~~ 338 (375)
++++.+++|..|.++.
T Consensus 182 ~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 182 KTDLPIIVDVSHSTGR 197 (250)
T ss_pred HhCCCeEECCCCCCcc
Confidence 8999999999998874
No 424
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=40.78 E-value=1.2e+02 Score=30.52 Aligned_cols=82 Identities=12% Similarity=-0.095 Sum_probs=54.0
Q ss_pred CCchHHHHHHHHcCCeEEEEecCCCCC-cCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcc---c-cccHHHHHHHHHh
Q psy1596 250 QAHSSVEKAGLIGLVKMRYIESDDKLS-LRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGAC---A-FDNLEELGPICEK 323 (375)
Q Consensus 250 ~aH~Sv~kaa~lg~~~v~~Vp~d~~g~-md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tG---a-vDpl~eI~~ia~~ 323 (375)
..+..+.+.+.-. .+++.+.. |. .++++++.+++.-...|... |+.+. |++..- . --|+..|..+.++
T Consensus 212 ~~n~~LL~~~a~~-gkPVilk~---G~~~t~~e~~~Ave~i~~~Gn~~--i~L~erg~s~yp~~~~~~ldl~~i~~lk~~ 285 (360)
T PRK12595 212 MQNFELLKAAGRV-NKPVLLKR---GLSATIEEFIYAAEYIMSQGNGQ--IILCERGIRTYEKATRNTLDISAVPILKQE 285 (360)
T ss_pred ccCHHHHHHHHcc-CCcEEEeC---CCCCCHHHHHHHHHHHHHCCCCC--EEEECCccCCCCCCCCCCcCHHHHHHHHHH
Confidence 3445555543211 23455543 44 69999999999887777643 33333 555322 1 1389999999999
Q ss_pred cCCEEEEecccccC
Q psy1596 324 EGLWLHVDAAYAGS 337 (375)
Q Consensus 324 ~~iwlHVDaA~gg~ 337 (375)
+++++.+|..|.++
T Consensus 286 ~~~PV~~d~~Hs~G 299 (360)
T PRK12595 286 THLPVMVDVTHSTG 299 (360)
T ss_pred hCCCEEEeCCCCCc
Confidence 99999999999877
No 425
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=40.43 E-value=1.4e+02 Score=29.52 Aligned_cols=75 Identities=9% Similarity=-0.016 Sum_probs=38.4
Q ss_pred EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCC--ch------HHHHHHHHcCCeEEEEecCC
Q psy1596 202 ITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA--HS------SVEKAGLIGLVKMRYIESDD 273 (375)
Q Consensus 202 GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~a--H~------Sv~kaa~lg~~~v~~Vp~d~ 273 (375)
.++++|||.+|....+++--+.. + =+.+|++++.. +. .....++..|.+++.++.+.
T Consensus 68 ~vvs~ggs~gN~g~alA~~a~~~--------G-------l~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA~v~~v~~~~ 132 (337)
T TIGR01274 68 TLVSIGGIQSNQTRQVAAVAAHL--------G-------MKCVLVQENWVNYSDAVYDRVGNIQLSRIMGADVRLDPDGF 132 (337)
T ss_pred EEEECCCCcchHHHHHHHHHHHc--------C-------CcEEEEeccCCCccccchhccchHHHHHHcCCEEEEeCCcc
Confidence 57788888887644333322211 0 13467777643 21 23333456788888887542
Q ss_pred CCCcCHHHHHHHHHHhhhc
Q psy1596 274 KLSLRGDKLIEAIERDKKK 292 (375)
Q Consensus 274 ~g~md~e~Le~aI~~~~~~ 292 (375)
+.. ..+.++++.+...+.
T Consensus 133 ~~~-~~~~~~~a~~~~~~~ 150 (337)
T TIGR01274 133 DIG-HRNSWERALEEVRGA 150 (337)
T ss_pred ccc-chHHHHHHHHHHHhc
Confidence 211 234454555443333
No 426
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=39.97 E-value=42 Score=28.47 Aligned_cols=47 Identities=26% Similarity=0.176 Sum_probs=29.4
Q ss_pred CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEE
Q psy1596 276 SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHV 330 (375)
Q Consensus 276 ~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHV 330 (375)
+++.+..++.+++-...+ .| +|+.|-|. ++-+++.++|+++++++..
T Consensus 64 ~l~~~~r~~~l~~l~~~~-~P-~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSYN-PP-CIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp CS-HHHHCCHHHHHCTTT--S--EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HCCHHHHHHHHHHHhCCC-CC-EEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 588888888887755533 35 56666653 7789999999999999864
No 427
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=39.90 E-value=1.1e+02 Score=29.28 Aligned_cols=84 Identities=13% Similarity=-0.061 Sum_probs=56.5
Q ss_pred CCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-cc---cccHHHHHHHHHhcC
Q psy1596 250 QAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-CA---FDNLEELGPICEKEG 325 (375)
Q Consensus 250 ~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-Ga---vDpl~eI~~ia~~~~ 325 (375)
..+..+.+++.-. .+++.|... -..++++++.+++.....|..- ++++-.|++.. +. .-++..|..+.++++
T Consensus 119 ~~n~~LL~~~a~~-gkPVilk~G--~~~t~~e~~~Ave~i~~~Gn~~-i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~ 194 (260)
T TIGR01361 119 MQNFELLKEVGKQ-GKPVLLKRG--MGNTIEEWLYAAEYILSSGNGN-VILCERGIRTFEKATRNTLDLSAVPVLKKETH 194 (260)
T ss_pred ccCHHHHHHHhcC-CCcEEEeCC--CCCCHHHHHHHHHHHHHcCCCc-EEEEECCCCCCCCCCcCCcCHHHHHHHHHhhC
Confidence 3445555544211 245555532 1248999999999887777643 44444466444 43 468999999999899
Q ss_pred CEEEEecccccC
Q psy1596 326 LWLHVDAAYAGS 337 (375)
Q Consensus 326 iwlHVDaA~gg~ 337 (375)
+.+.+|..|.++
T Consensus 195 ~pV~~ds~Hs~G 206 (260)
T TIGR01361 195 LPIIVDPSHAAG 206 (260)
T ss_pred CCEEEcCCCCCC
Confidence 999999999887
No 428
>smart00642 Aamy Alpha-amylase domain.
Probab=39.46 E-value=95 Score=27.54 Aligned_cols=30 Identities=13% Similarity=0.208 Sum_probs=26.1
Q ss_pred CccccccHHHHHHHHHhcCCEEEEeccccc
Q psy1596 307 GACAFDNLEELGPICEKEGLWLHVDAAYAG 336 (375)
Q Consensus 307 ~tGavDpl~eI~~ia~~~~iwlHVDaA~gg 336 (375)
..|..++++++++-|+++|+.+++|-...-
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 457889999999999999999999987543
No 429
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=39.08 E-value=3.7e+02 Score=26.02 Aligned_cols=66 Identities=12% Similarity=-0.023 Sum_probs=43.6
Q ss_pred eEEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 243 LVAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
.+|+++....--..-+..+ .+.++..+|.|= =|++++++..++...++...-++|-++|....|.+
T Consensus 32 ~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL---s~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f 100 (265)
T COG0300 32 NLILVARREDKLEALAKELEDKTGVEVEVIPADL---SDPEALERLEDELKERGGPIDVLVNNAGFGTFGPF 100 (265)
T ss_pred EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC---CChhHHHHHHHHHHhcCCcccEEEECCCcCCccch
Confidence 4788887765433333344 356777888762 25677777666655555556688899998888866
No 430
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=38.37 E-value=65 Score=27.15 Aligned_cols=48 Identities=21% Similarity=0.160 Sum_probs=37.6
Q ss_pred CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEE
Q psy1596 275 LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHV 330 (375)
Q Consensus 275 g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHV 330 (375)
.+|++++|++.++++.+ . ...||-.+|.+.-.++..+++++.++-+.+
T Consensus 47 Hkl~~eEle~~lee~~E------~--ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEEGPE------V--IVVGTGQSGMLELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhcCCc------E--EEEecCceeEEEeCHHHHHHHHhcCCeEEE
Confidence 47999999999997643 2 233667889998889999999998866653
No 431
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=37.34 E-value=86 Score=32.34 Aligned_cols=94 Identities=17% Similarity=0.323 Sum_probs=58.1
Q ss_pred EecCCCchHHHHHHHHc-CCeEEEEecCCCCC-cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596 246 YCSDQAHSSVEKAGLIG-LVKMRYIESDDKLS-LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323 (375)
Q Consensus 246 ~~S~~aH~Sv~kaa~lg-~~~v~~Vp~d~~g~-md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~ 323 (375)
+..+.+|..+.|--.+. ..++.++.-++.+. .+.+.|-+.|+....+- - +||.+ ...-|...+++++.++||+
T Consensus 95 l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~--~-~vVLS--DY~KG~L~~~q~~I~~ar~ 169 (467)
T COG2870 95 LLRDKNRPTIVKLRVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSF--D-ALVLS--DYAKGVLTNVQKMIDLARE 169 (467)
T ss_pred eEeecCCCceeeeeeecccceEEEecccccCcchhHHHHHHHHHHHhhcC--C-EEEEe--ccccccchhHHHHHHHHHH
Confidence 45566666666653232 34666666544333 33445555554433221 1 23332 3457999999999999999
Q ss_pred cCCEEEEe------cccccCcccchhh
Q psy1596 324 EGLWLHVD------AAYAGSSFICPEF 344 (375)
Q Consensus 324 ~~iwlHVD------aA~gg~~~~~~~~ 344 (375)
.|+++.|| .=|.|..++.|..
T Consensus 170 ~~~pVLvDPKg~Df~~Y~GAtLiTPN~ 196 (467)
T COG2870 170 AGIPVLVDPKGKDFEKYRGATLITPNL 196 (467)
T ss_pred cCCcEEECCCCcchhhhCCCeecCCCH
Confidence 99999999 4577777776643
No 432
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=36.47 E-value=2.6e+02 Score=25.70 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=45.8
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhh
Q psy1596 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWL 348 (375)
Q Consensus 269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~ 348 (375)
+-.|.++..+++...+.++...+-+ +...--+ -..++++.+.++.++.++.+-.|....... .++...
T Consensus 97 l~lDaN~~~~~~~a~~~~~~l~~~~----i~~iEeP----~~~~d~~~~~~L~~~~~~pIa~dEs~~~~~----~~~~~~ 164 (229)
T cd00308 97 LAVDANGAWTPKEAIRLIRALEKYG----LAWIEEP----CAPDDLEGYAALRRRTGIPIAADESVTTVD----DALEAL 164 (229)
T ss_pred EEEECCCCCCHHHHHHHHHHhhhcC----CCeEECC----CCccCHHHHHHHHhhCCCCEEeCCCCCCHH----HHHHHH
Confidence 3445566677766665555432211 1112222 133567777788877788887777554321 111111
Q ss_pred cCCCcccEEEEcCcccCC
Q psy1596 349 AGVEYANSIAFNPSKWLM 366 (375)
Q Consensus 349 ~gie~aDSi~~d~HK~l~ 366 (375)
. ...+|.+.+++.|+++
T Consensus 165 ~-~~~~d~~~~k~~~~GG 181 (229)
T cd00308 165 E-LGAVDILQIKPTRVGG 181 (229)
T ss_pred H-cCCCCEEecCccccCC
Confidence 1 1236888888888765
No 433
>PRK13758 anaerobic sulfatase-maturase; Provisional
Probab=36.20 E-value=1.9e+02 Score=28.67 Aligned_cols=88 Identities=13% Similarity=0.102 Sum_probs=40.6
Q ss_pred CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCC---EEEEecccccCcccchhhhhhhcC
Q psy1596 274 KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGL---WLHVDAAYAGSSFICPEFRKWLAG 350 (375)
Q Consensus 274 ~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~i---wlHVDaA~gg~~~~~~~~~~~~~g 350 (375)
.+.|+.+.++++++...........|..+.|-...-..+-+.++.+++++++. -+.+ .-..-+.++.++....+..
T Consensus 36 ~~~m~~~~~~~~i~~~~~~~~~~~~i~~~GGEPll~~~~~~~~~~~~~~~~~~~~~~~~~-~i~TNG~ll~~~~~~~l~~ 114 (370)
T PRK13758 36 YGIMRDEVLESMVKRVLNEAEGHCSFAFQGGEPTLAGLEFFEELMELQRKHNYKNLKIYN-SLQTNGTLIDESWAKFLSE 114 (370)
T ss_pred cCCCCHHHHHHHHHHHHhccCCceEEEEECCccccCChHHHHHHHHHHHHhccCCCeEEE-EEEecCEecCHHHHHHHHH
Confidence 35677777777776433322112234444332222223445677777777652 1111 1112223444444333322
Q ss_pred CCcccEEEEcCc
Q psy1596 351 VEYANSIAFNPS 362 (375)
Q Consensus 351 ie~aDSi~~d~H 362 (375)
.....+|++|+-
T Consensus 115 ~~~~v~iSlDg~ 126 (370)
T PRK13758 115 NKFLVGLSMDGP 126 (370)
T ss_pred cCceEEEeecCC
Confidence 222466777773
No 434
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=35.61 E-value=3.1e+02 Score=24.13 Aligned_cols=68 Identities=10% Similarity=0.071 Sum_probs=35.5
Q ss_pred eEEEecCCC--chHHHHHH---HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596 243 LVAYCSDQA--HSSVEKAG---LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN 313 (375)
Q Consensus 243 ~vV~~S~~a--H~Sv~kaa---~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp 313 (375)
-+|+++... .....+.. +-.+.++..+.+| --|.++++++++...++..+...|+-.+|....+.+.+
T Consensus 27 ~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~D---v~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~ 99 (181)
T PF08659_consen 27 RLILLGRSGAPSAEAEAAIRELESAGARVEYVQCD---VTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQD 99 (181)
T ss_dssp EEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE-----TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC
T ss_pred EEEEeccCCCccHHHHHHHHHHHhCCCceeeeccC---ccCHHHHHHHHHHHHhccCCcceeeeeeeeeccccccc
Confidence 366677662 23333333 2346788888887 45899999999887665533445777777766666643
No 435
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=34.43 E-value=71 Score=32.23 Aligned_cols=57 Identities=16% Similarity=0.126 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCC-ccccccHHHHHHHHHhcCCEEEEeccc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTG-ACAFDNLEELGPICEKEGLWLHVDAAY 334 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~-tGavDpl~eI~~ia~~~~iwlHVDaA~ 334 (375)
+.++.++.|++..+.|..-++.....+... .-..+.+++|.++|+++|+.+++|-.-
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp 69 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISP 69 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-C
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCH
Confidence 678889999988888875544444444332 345688999999999999999999653
No 436
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=34.06 E-value=71 Score=30.48 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=28.3
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecccccCcccc
Q psy1596 308 ACAFDNLEELGPICEKEGLWLHVDAAYAGSSFIC 341 (375)
Q Consensus 308 tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~ 341 (375)
.|.+.+-+++.++++++++-++||++|-....++
T Consensus 48 ~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~is 81 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGIDLVIDATHPYAAQIS 81 (248)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCccHHHHH
Confidence 3666688999999999999999999997765443
No 437
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=33.26 E-value=39 Score=31.67 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=27.0
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecccc
Q psy1596 304 GTTGACAFDNLEELGPICEKEGLWLHVDAAYA 335 (375)
Q Consensus 304 GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~g 335 (375)
..+..|..++++++++.|+++|+.|++|-+..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 45667888999999999999999999998764
No 438
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=33.18 E-value=1.8e+02 Score=29.45 Aligned_cols=71 Identities=11% Similarity=-0.035 Sum_probs=50.7
Q ss_pred eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC-----CCccccccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT-----TGACAFDNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 265 ~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt-----T~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
+++.+.. .-.++++++..+++.-.+.|.. -++++-.|+ +.+-..-|+..|..+.+.+++++++|..|+.+.
T Consensus 209 kPVllk~--G~~~t~ee~~~A~e~i~~~Gn~-~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 209 KPVLLKR--GMAATIDEWLMAAEYILAAGNP-NVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CeEEEeC--CCCCCHHHHHHHHHHHHHcCCC-eEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 4455543 2335999999999887776763 355565554 223345689999999888899999999998873
No 439
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=33.12 E-value=45 Score=30.25 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=41.9
Q ss_pred CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 274 KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 274 ~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
.|+-|...|++++.. -++.|-|+.. ..+-++.|....++.|+.+..|.=++|-.
T Consensus 9 EGK~D~~~lk~~~d~---------~~I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~Gek 62 (174)
T TIGR00334 9 EGKDDQARIKQAFDV---------DVIETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGEK 62 (174)
T ss_pred ecchHHHHHHHhcCc---------eEEEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchHH
Confidence 377899999888742 3667777553 45668888888999999999999998853
No 440
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=31.79 E-value=2.2e+02 Score=27.54 Aligned_cols=56 Identities=9% Similarity=-0.106 Sum_probs=28.9
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchH-HHHHHHHcCCeEEEEec
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS-VEKAGLIGLVKMRYIES 271 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~S-v~kaa~lg~~~v~~Vp~ 271 (375)
..++++|||.+|...-+++--+... -+..|++++..... ....++..|.+++.++.
T Consensus 57 ~~vv~~g~ssGN~g~alA~~a~~~G---------------~~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~ 113 (311)
T TIGR01275 57 DTVITVGAIQSNHARATALAAKKLG---------------LDAVLVLREKEELNGNLLLDKLMGAETRVYSA 113 (311)
T ss_pred CEEEEcCCchhHHHHHHHHHHHHhC---------------CceEEEecCCccCCCCHHHHHHcCCEEEEECc
Confidence 3688988888877433332221110 13467777643222 12223556667776653
No 441
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=31.76 E-value=2e+02 Score=25.60 Aligned_cols=57 Identities=18% Similarity=0.064 Sum_probs=40.3
Q ss_pred CCcCHHHHHHHHHHhhhcCCccEEEEEEc-CCCC------------ccccccHHHHHHHHHhcCCEEEEe
Q psy1596 275 LSLRGDKLIEAIERDKKKHLIPFFVCGTL-GTTG------------ACAFDNLEELGPICEKEGLWLHVD 331 (375)
Q Consensus 275 g~md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~------------tGavDpl~eI~~ia~~~~iwlHVD 331 (375)
-.++.+.-++.++.-.+.|...+++.-+. +... .+..|.|+.+.+.|+++|+-|++-
T Consensus 15 ~~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 15 QNWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 36788888888887777776655444333 1111 134589999999999999999874
No 442
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=31.03 E-value=1.5e+02 Score=29.49 Aligned_cols=59 Identities=19% Similarity=0.077 Sum_probs=43.9
Q ss_pred CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-cccHHHHHHHHHhcCCEEEEeccc
Q psy1596 275 LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-FDNLEELGPICEKEGLWLHVDAAY 334 (375)
Q Consensus 275 g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-vDpl~eI~~ia~~~~iwlHVDaA~ 334 (375)
-.++.+++++.++.-.+. ....-+|+..||-+.|. .|...+|.++|++.|..+.+|..-
T Consensus 109 p~is~~~~~~~l~~~~~~-l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 109 PEISEAELEQFLEQLKAL-LESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 457888888877654331 12234577788888886 588999999999999999999753
No 443
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=30.70 E-value=3e+02 Score=27.08 Aligned_cols=52 Identities=15% Similarity=0.169 Sum_probs=34.6
Q ss_pred CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEE
Q psy1596 275 LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHV 330 (375)
Q Consensus 275 g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHV 330 (375)
..|+.+.+.+.|++..+.| ...|..+.|.. + ...++.+|.+.+++.++.+.+
T Consensus 35 ~~l~~e~~~~ii~~~~~~g--~~~v~~~GGEP-l-l~~~~~~ii~~~~~~g~~~~l 86 (358)
T TIGR02109 35 AELTTEEWTDVLTQAAELG--VLQLHFSGGEP-L-ARPDLVELVAHARRLGLYTNL 86 (358)
T ss_pred CCCCHHHHHHHHHHHHhcC--CcEEEEeCccc-c-ccccHHHHHHHHHHcCCeEEE
Confidence 4688998888887755544 23455554432 2 346788999999888876543
No 444
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=30.37 E-value=2.6e+02 Score=26.98 Aligned_cols=77 Identities=13% Similarity=0.001 Sum_probs=51.5
Q ss_pred hHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc---cccHHHHHHHHHhcCCEEE
Q psy1596 253 SSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA---FDNLEELGPICEKEGLWLH 329 (375)
Q Consensus 253 ~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa---vDpl~eI~~ia~~~~iwlH 329 (375)
+.+.+++--. .+++.|+ ....+.++++..+++.....|. +-++++-=|+|. |. +-|+..|.-+.+ .+++++
T Consensus 106 ~~LL~a~g~t-~kpV~lK--rG~~~t~~e~l~aaeyi~~~Gn-~~viLcERG~tf-~y~r~~~D~~~ip~~k~-~~~PVi 179 (258)
T TIGR01362 106 TDLLVAAAKT-GRIVNVK--KGQFLSPWDMKNVVEKVLSTGN-KNILLCERGTSF-GYNNLVVDMRSLPIMRE-LGCPVI 179 (258)
T ss_pred HHHHHHHhcc-CCeEEec--CCCcCCHHHHHHHHHHHHHcCC-CcEEEEeCCCCc-CCCCcccchhhhHHHHh-cCCCEE
Confidence 3455554222 2344444 4445899999998888777776 445666668765 55 457777776654 589999
Q ss_pred Eecccc
Q psy1596 330 VDAAYA 335 (375)
Q Consensus 330 VDaA~g 335 (375)
+|..|+
T Consensus 180 ~DpSHs 185 (258)
T TIGR01362 180 FDATHS 185 (258)
T ss_pred EeCCcc
Confidence 999997
No 445
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=29.81 E-value=75 Score=28.85 Aligned_cols=49 Identities=22% Similarity=0.313 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcC--CEEEEecccccC
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG--LWLHVDAAYAGS 337 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~--iwlHVDaA~gg~ 337 (375)
|...|+++++.+.+ +|+.- +|.+-+|+++.+..++.| +++|||=.-|..
T Consensus 12 ~~~~le~~les~~~------~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESESQ------YVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCCCe------EEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 45678888876533 33332 467889999999999876 799999888876
No 446
>KOG0369|consensus
Probab=29.70 E-value=49 Score=36.20 Aligned_cols=31 Identities=26% Similarity=0.356 Sum_probs=28.8
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596 308 ACAFDNLEELGPICEKEGLWLHVDAAYAGSS 338 (375)
Q Consensus 308 tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~ 338 (375)
.|.|...+|-.++|++||++++.-+||||+.
T Consensus 167 pgPitt~~EA~eF~k~yG~PvI~KAAyGGGG 197 (1176)
T KOG0369|consen 167 PGPITTVEEALEFVKEYGLPVIIKAAYGGGG 197 (1176)
T ss_pred CCCcccHHHHHHHHHhcCCcEEEeecccCCC
Confidence 4788899999999999999999999999975
No 447
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=29.44 E-value=88 Score=30.88 Aligned_cols=56 Identities=11% Similarity=0.163 Sum_probs=28.0
Q ss_pred CcCHHHHHHHHHHhhhcCCccEEEEEEc-------CCCCccccccHHHHHHHHHhcCCEEEEe
Q psy1596 276 SLRGDKLIEAIERDKKKHLIPFFVCGTL-------GTTGACAFDNLEELGPICEKEGLWLHVD 331 (375)
Q Consensus 276 ~md~e~Le~aI~~~~~~g~~p~~Vv~t~-------GtT~tGavDpl~eI~~ia~~~~iwlHVD 331 (375)
|+-++..++.|++-++.|...+.+-+-. |.-..-...||....++|+++|+++++-
T Consensus 20 r~p~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g~~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 20 RIPPEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTGNRDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp GS-GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SGGG-HHHHHHHHHHTT-EEEEE
T ss_pred cCChhHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccchhhHHHHHHHHHHcCcEEEec
Confidence 4444555555655555554332222211 1111222368999999999999988764
No 448
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase
Probab=29.39 E-value=1.2e+02 Score=31.77 Aligned_cols=51 Identities=18% Similarity=0.178 Sum_probs=38.8
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
+-|.+++-.+-.|..|..|++..-+-..|...+.+++.++|++|++.+ ++.
T Consensus 177 htEaavdLarlAgl~Paavi~Ei~~~~dG~m~~~~~~~~fA~~h~L~~-v~i 227 (450)
T PLN02831 177 HTEAAVDLAVLAGLPPVGVLCEIVNDEDGSMARLPQLRKFAEEHGLKI-ISI 227 (450)
T ss_pred hHHHHHHHHHHcCCCceEEEEEeccCCCCCccChHHHHHHHHHcCCcE-EEH
Confidence 456666666677888888888875434688899999999999999888 444
No 449
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=28.99 E-value=1.1e+02 Score=27.20 Aligned_cols=68 Identities=10% Similarity=0.087 Sum_probs=34.7
Q ss_pred EEEecCC-CchHHHHHHHHcCCeEEEEecCCC----CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596 244 VAYCSDQ-AHSSVEKAGLIGLVKMRYIESDDK----LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF 311 (375)
Q Consensus 244 vV~~S~~-aH~Sv~kaa~lg~~~v~~Vp~d~~----g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav 311 (375)
+|..+.. -.......+.-.+.++..++.... ..++.+.+.++++--......|++|.+..|..-||.+
T Consensus 36 II~L~~e~~~~~~~~f~~~~~I~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v 108 (164)
T PF03162_consen 36 IINLRPEPPSQDFLEFAEENGIKLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV 108 (164)
T ss_dssp EEE--SS---HHHHHHHHHTT-EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH
T ss_pred EEEecCCCCCHHHHHHHhhcCceEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH
Confidence 5555544 334444445556778888887533 3467788888776433333459999999999999975
No 450
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid
Probab=28.91 E-value=3.2e+02 Score=25.32 Aligned_cols=62 Identities=16% Similarity=0.050 Sum_probs=35.9
Q ss_pred eEEEEec-CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEE
Q psy1596 265 KMRYIES-DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHV 330 (375)
Q Consensus 265 ~v~~Vp~-d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHV 330 (375)
++..+.+ ++++..+...+.++|+...+++ +.+|...+|... ....+.++.+.+.+.|+.+.+
T Consensus 96 ~l~~~~v~~~~~~~~~~~~~~ai~~a~~~~--~~iin~S~g~~~--~~~~~~~~~~~a~~~gilvV~ 158 (260)
T cd07484 96 KIMPVKVLDANGSGSLADIANGIRYAADKG--AKVINLSLGGGL--GSTALQEAINYAWNKGVVVVA 158 (260)
T ss_pred EEEEEEEECCCCCcCHHHHHHHHHHHHHCC--CeEEEecCCCCC--CCHHHHHHHHHHHHCCCEEEE
Confidence 3444443 3455667777777776655554 335555555443 334566666677777776665
No 451
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=28.43 E-value=3.3e+02 Score=24.56 Aligned_cols=31 Identities=32% Similarity=0.268 Sum_probs=11.9
Q ss_pred EEEEcCCCCccccccHHHHHHHHHhcCCEEE
Q psy1596 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLH 329 (375)
Q Consensus 299 Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlH 329 (375)
+...+|.........+.++.+.+.+.|+.+.
T Consensus 95 in~S~G~~~~~~~~~~~~~~~~a~~~g~l~V 125 (222)
T cd07492 95 VNLSLGGPGDRDFPLLKELLEYAYKAGGIIV 125 (222)
T ss_pred EEeCCCCCCCCcCHHHHHHHHHHHHCCCEEE
Confidence 3334443333333334444444444344333
No 452
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=28.25 E-value=3.5e+02 Score=22.67 Aligned_cols=58 Identities=17% Similarity=0.007 Sum_probs=34.9
Q ss_pred HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 255 VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 255 v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
+...+.-.+.++..+.+-.+ |.+.++++|++..++ . =++.|.|.+..|..|-..+..+
T Consensus 24 l~~~l~~~G~~v~~~~~v~D---d~~~i~~~i~~~~~~---~-DlvittGG~g~g~~D~t~~ai~ 81 (133)
T cd00758 24 LEALLEDLGCEVIYAGVVPD---DADSIRAALIEASRE---A-DLVLTTGGTGVGRRDVTPEALA 81 (133)
T ss_pred HHHHHHHCCCEEEEeeecCC---CHHHHHHHHHHHHhc---C-CEEEECCCCCCCCCcchHHHHH
Confidence 33334434556665543211 678888888765442 1 2555557788889898877654
No 453
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=27.83 E-value=1.5e+02 Score=29.20 Aligned_cols=77 Identities=14% Similarity=0.042 Sum_probs=45.6
Q ss_pred cCCCchHHHHHHHH--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcC
Q psy1596 248 SDQAHSSVEKAGLI--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG 325 (375)
Q Consensus 248 S~~aH~Sv~kaa~l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~ 325 (375)
.-.++.|+...-.- -..-++.||. +.+..+++++.++|. ..+|+.+.|..+.| -.+++.++|++++
T Consensus 54 G~~~y~sv~dlp~~~~~DlAvI~vPa--------~~v~~al~e~~~~Gv-k~~vIisaGf~e~g---~~~~~~~~ar~~g 121 (300)
T PLN00125 54 GLPVFNTVAEAKAETKANASVIYVPP--------PFAAAAILEAMEAEL-DLVVCITEGIPQHD---MVRVKAALNRQSK 121 (300)
T ss_pred CeeccCCHHHHhhccCCCEEEEecCH--------HHHHHHHHHHHHcCC-CEEEEECCCCCccc---HHHHHHHHHhhcC
Confidence 44455666655432 1233444553 445555555555553 55788898887777 3455666899999
Q ss_pred CEEEEeccccc
Q psy1596 326 LWLHVDAAYAG 336 (375)
Q Consensus 326 iwlHVDaA~gg 336 (375)
+.+.==.+.|.
T Consensus 122 irviGPNc~Gi 132 (300)
T PLN00125 122 TRLIGPNCPGI 132 (300)
T ss_pred CEEECCCCcee
Confidence 88764444444
No 454
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=27.78 E-value=1.4e+02 Score=29.16 Aligned_cols=52 Identities=17% Similarity=0.095 Sum_probs=34.9
Q ss_pred HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy1596 280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAG 336 (375)
Q Consensus 280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg 336 (375)
+.+.++++++.++|. ..+|+.+.|-.+. +-++|.++|+++|+.+.==.+.|.
T Consensus 74 ~~v~~~l~e~~~~Gv-k~avIis~Gf~e~----~~~~l~~~a~~~girilGPNc~Gi 125 (286)
T TIGR01019 74 PFAADAIFEAIDAGI-ELIVCITEGIPVH----DMLKVKRYMEESGTRLIGPNCPGI 125 (286)
T ss_pred HHHHHHHHHHHHCCC-CEEEEECCCCCHH----HHHHHHHHHHHcCCEEECCCCceE
Confidence 455556666655553 4678888885433 457999999999998874444444
No 455
>KOG1411|consensus
Probab=27.69 E-value=98 Score=31.38 Aligned_cols=94 Identities=11% Similarity=0.111 Sum_probs=59.9
Q ss_pred eEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc---cccHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA---FDNLEEL 317 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa---vDpl~eI 317 (375)
-.||++..+.....+.-...+..+....- .....+|.+.+-+.+.+... |. ++++=-+..++||. .+..++|
T Consensus 147 ~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~-gs--~ilLhaCaHNPTGvDPt~eqw~ki 223 (427)
T KOG1411|consen 147 RDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPE-GS--IILLHACAHNPTGVDPTKEQWEKI 223 (427)
T ss_pred cceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCC-Cc--EEEeehhhcCCCCCCccHHHHHHH
Confidence 36899998865544444455554443332 24456888877776665433 32 23333334456653 3557889
Q ss_pred HHHHHhcCCEEEEecccccCcc
Q psy1596 318 GPICEKEGLWLHVDAAYAGSSF 339 (375)
Q Consensus 318 ~~ia~~~~iwlHVDaA~gg~~~ 339 (375)
.++.++.+..-..|.||-|++.
T Consensus 224 ~~~~~~k~~~pffDmAYQGfaS 245 (427)
T KOG1411|consen 224 SDLIKEKNLLPFFDMAYQGFAS 245 (427)
T ss_pred HHHhhhccccchhhhhhccccc
Confidence 9999999999999999988763
No 456
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=27.62 E-value=1.4e+02 Score=25.33 Aligned_cols=63 Identities=13% Similarity=-0.098 Sum_probs=32.1
Q ss_pred eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH-HHHHHHHHhcCCEEEEe
Q psy1596 265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL-EELGPICEKEGLWLHVD 331 (375)
Q Consensus 265 ~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl-~eI~~ia~~~~iwlHVD 331 (375)
.++.|-...|.....+.|++.|+... .+. . +++++.. ....-...+ +.+.++|+++.-..++|
T Consensus 52 d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~-~-ivlv~~~-~~~~~~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 52 KTVVIGLGTNGPFTKDQLDELLDALG-PDR-Q-VYLVNPH-VPRPWEPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred CeEEEEecCCCCCCHHHHHHHHHHcC-CCC-E-EEEEECC-CCcchHHHHHHHHHHHHHHCCCcEEec
Confidence 55555554444467788888887653 222 2 2333332 111112223 33557888883344455
No 457
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=27.49 E-value=5.6e+02 Score=24.59 Aligned_cols=89 Identities=13% Similarity=-0.001 Sum_probs=48.5
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH-HHcCCeEEEEecCCCCCcCH
Q psy1596 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG-LIGLVKMRYIESDDKLSLRG 279 (375)
Q Consensus 201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa-~lg~~~v~~Vp~d~~g~md~ 279 (375)
..++.+|+|.++=.|..-... + . .-.+|++..-. --++.-+ .++..++..+..| --|.
T Consensus 7 kv~lITGASSGiG~A~A~~l~----~---~----------G~~vvl~aRR~-drL~~la~~~~~~~~~~~~~D---VtD~ 65 (246)
T COG4221 7 KVALITGASSGIGEATARALA----E---A----------GAKVVLAARRE-ERLEALADEIGAGAALALALD---VTDR 65 (246)
T ss_pred cEEEEecCcchHHHHHHHHHH----H---C----------CCeEEEEeccH-HHHHHHHHhhccCceEEEeec---cCCH
Confidence 367888888776554432111 1 0 11255555443 2333333 4654455666665 3478
Q ss_pred HHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596 280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACA 310 (375)
Q Consensus 280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa 310 (375)
++++++|+.-.++-...-++|-++|--..+.
T Consensus 66 ~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~ 96 (246)
T COG4221 66 AAVEAAIEALPEEFGRIDILVNNAGLALGDP 96 (246)
T ss_pred HHHHHHHHHHHHhhCcccEEEecCCCCcCCh
Confidence 8888888764443223447888888655443
No 458
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=27.32 E-value=3.4e+02 Score=23.40 Aligned_cols=60 Identities=17% Similarity=-0.092 Sum_probs=34.0
Q ss_pred HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596 255 VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319 (375)
Q Consensus 255 v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ 319 (375)
+.+.++-.|.+++.+.+-.| |++.|+++|++..++ ... =++.|.|.+..|..|-..++.+
T Consensus 25 l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~-~~~-DlVittGG~s~g~~D~t~~al~ 84 (152)
T cd00886 25 LVELLEEAGHEVVAYEIVPD---DKDEIREALIEWADE-DGV-DLILTTGGTGLAPRDVTPEATR 84 (152)
T ss_pred HHHHHHHcCCeeeeEEEcCC---CHHHHHHHHHHHHhc-CCC-CEEEECCCcCCCCCcCcHHHHH
Confidence 33334444556665554221 678888888765441 011 2445557788899888665543
No 459
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=27.10 E-value=1.7e+02 Score=28.68 Aligned_cols=74 Identities=19% Similarity=0.197 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcC--CEEEE-ecccccCcccchhhhhhhcCCCcc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG--LWLHV-DAAYAGSSFICPEFRKWLAGVEYA 354 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~--iwlHV-DaA~gg~~~~~~~~~~~~~gie~a 354 (375)
|.+.+.++|+...+. .++.++. .|.-|.++.-.+|+++.+++. +-+.| +-|.+++++++= .|
T Consensus 76 dse~v~raI~~~~~~--~~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIAL----------aA 140 (285)
T PF01972_consen 76 DSEFVLRAIREAPKD--KPIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIAL----------AA 140 (285)
T ss_pred hHHHHHHHHHhcCCC--CceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHHH----------hC
Confidence 445556666543332 2443443 478899999999999999884 33444 667877766431 26
Q ss_pred cEEEEcCcccCC
Q psy1596 355 NSIAFNPSKWLM 366 (375)
Q Consensus 355 DSi~~d~HK~l~ 366 (375)
|-|..++|--+|
T Consensus 141 DeIvM~p~a~LG 152 (285)
T PF01972_consen 141 DEIVMGPGAVLG 152 (285)
T ss_pred CeEEECCCCccC
Confidence 888988888765
No 460
>PF05670 DUF814: Domain of unknown function (DUF814); InterPro: IPR008532 This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from O34693 from SWISSPROT where the N-terminal region is involved in this activity []. Hence the activity of this C-terminal domain is unknown. This domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important.
Probab=26.84 E-value=42 Score=26.65 Aligned_cols=25 Identities=32% Similarity=0.589 Sum_probs=18.3
Q ss_pred HHH-HHHHHhcCCEEEEecccccCccc
Q psy1596 315 EEL-GPICEKEGLWLHVDAAYAGSSFI 340 (375)
Q Consensus 315 ~eI-~~ia~~~~iwlHVDaA~gg~~~~ 340 (375)
+.| .++++..++|||+|+. +|+..+
T Consensus 20 e~L~~k~~~~~D~wfH~~~~-pg~hvi 45 (90)
T PF05670_consen 20 EMLTKKYARPNDLWFHADDF-PGPHVI 45 (90)
T ss_pred HHHHHHhhhhcceeEeccCC-CCCEEE
Confidence 345 6889999999999974 444433
No 461
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=26.74 E-value=2.7e+02 Score=26.17 Aligned_cols=87 Identities=13% Similarity=0.023 Sum_probs=54.3
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh
Q psy1596 268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW 347 (375)
Q Consensus 268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~ 347 (375)
.+.+|.++..+++...+.++.-...+ + ...--+ ...++++.+.+++++.++.+..|+..-.. ..++..
T Consensus 131 ~l~vDan~~~~~~~a~~~~~~l~~~~--i--~~iEeP----~~~~d~~~~~~l~~~~~ipia~dE~~~~~----~~~~~~ 198 (265)
T cd03315 131 ELRVDANRGWTPKQAIRALRALEDLG--L--DYVEQP----LPADDLEGRAALARATDTPIMADESAFTP----HDAFRE 198 (265)
T ss_pred EEEEeCCCCcCHHHHHHHHHHHHhcC--C--CEEECC----CCcccHHHHHHHHhhCCCCEEECCCCCCH----HHHHHH
Confidence 34456677788877776666543322 1 112222 23467899999999999999999854221 122222
Q ss_pred hcCCCcccEEEEcCcccCCC
Q psy1596 348 LAGVEYANSIAFNPSKWLMV 367 (375)
Q Consensus 348 ~~gie~aDSi~~d~HK~l~~ 367 (375)
+. -..+|.+.+|+.|+++.
T Consensus 199 i~-~~~~d~v~~k~~~~GGi 217 (265)
T cd03315 199 LA-LGAADAVNIKTAKTGGL 217 (265)
T ss_pred HH-hCCCCEEEEecccccCH
Confidence 21 12479999999998863
No 462
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=26.73 E-value=1.5e+02 Score=30.48 Aligned_cols=50 Identities=16% Similarity=0.144 Sum_probs=37.2
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
+-|.+++-.+-.|..|..|++-.- +..|...+.+++.++|++|++.+ ++.
T Consensus 144 htEaavdL~~lAgl~Paavi~ei~-~~~G~~~~~~~~~~fA~~~~l~~-v~i 193 (402)
T PRK09311 144 HTEAAVDLARLAGLQPAGVICEIV-NEDGTMARVPELRVFADEHDLAL-ITI 193 (402)
T ss_pred hHHHHHHHHHHcCCCceEEEEEEe-cCCCcccchHHHHHHHHHcCCeE-EEe
Confidence 346666666667888887777764 35688888999999999999887 444
No 463
>PRK14019 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=26.45 E-value=1.3e+02 Score=30.45 Aligned_cols=50 Identities=14% Similarity=0.134 Sum_probs=36.8
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
+-|.+++-.+-.|..|..|++-. .+..|...+.+++.++|++|++.+ ++.
T Consensus 143 htEaavdLarlAgl~Paavi~ei-~~~~g~~~~~~~~~~fA~~h~L~~-v~i 192 (367)
T PRK14019 143 HTEAGCDLAALAGLTPAAVICEI-MKDDGTMARLPDLEEFAKEHGLKI-GTI 192 (367)
T ss_pred chHHHHHHHHHcCCCceEEEEEE-ecCCCcccchHHHHHHHHHcCCcE-EEH
Confidence 34556666666788787777776 345588888889999999999888 554
No 464
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=25.92 E-value=1.8e+02 Score=27.17 Aligned_cols=66 Identities=18% Similarity=0.194 Sum_probs=41.3
Q ss_pred hHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--ccHHHHHHHHHhcCC
Q psy1596 253 SSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--DNLEELGPICEKEGL 326 (375)
Q Consensus 253 ~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--Dpl~eI~~ia~~~~i 326 (375)
.+++.|+. +|+..++..|.. |.=..|+|+..-+.+.++|. .+ -+||.| |++++|.++|.+.|+
T Consensus 135 V~vetAiaml~dmG~~SiKffPm~--Gl~~leE~~avAkA~a~~g~---~l------EPTGGIdl~N~~~I~~i~l~aGv 203 (218)
T PF07071_consen 135 VPVETAIAMLKDMGGSSIKFFPMG--GLKHLEELKAVAKACARNGF---TL------EPTGGIDLDNFEEIVKICLDAGV 203 (218)
T ss_dssp EEHHHHHHHHHHTT--EEEE---T--TTTTHHHHHHHHHHHHHCT----EE------EEBSS--TTTHHHHHHHHHHTT-
T ss_pred ccHHHHHHHHHHcCCCeeeEeecC--CcccHHHHHHHHHHHHHcCc---ee------CCcCCcCHHHHHHHHHHHHHcCC
Confidence 45666653 366678888875 44467888888888888773 12 246665 799999999999887
Q ss_pred EEE
Q psy1596 327 WLH 329 (375)
Q Consensus 327 wlH 329 (375)
..+
T Consensus 204 ~~v 206 (218)
T PF07071_consen 204 EKV 206 (218)
T ss_dssp S-B
T ss_pred Cee
Confidence 543
No 465
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=25.73 E-value=2.5e+02 Score=28.80 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=45.7
Q ss_pred CcCHHHHHHHHHHhhhcC-CccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc
Q psy1596 276 SLRGDKLIEAIERDKKKH-LIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA 354 (375)
Q Consensus 276 ~md~e~Le~aI~~~~~~g-~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a 354 (375)
.+.++++-+.+.++.... ...-.|..+ |.-+.-..+.+.+|.+.+++.++.++++-.-|.+ +..++....+... +.
T Consensus 53 ~~t~~evl~ev~~d~~~~~~~~ggVtis-GGGepl~~~~l~eLl~~lk~~gi~taI~~TnG~~-l~~~e~~~~L~~~-gl 129 (404)
T TIGR03278 53 FIPPQVVLGEVQTSLGFRTGRDTKVTIS-GGGDVSCYPELEELTKGLSDLGLPIHLGYTSGKG-FDDPEIAEFLIDN-GV 129 (404)
T ss_pred cCCHHHHHHHHHHHHHHhcCCCCEEEEE-CCcccccCHHHHHHHHHHHhCCCCEEEeCCCCcc-cCCHHHHHHHHHc-CC
Confidence 467788877777765421 111123333 3233345578899999999999888875222221 2233322222110 24
Q ss_pred cEEEEcCc
Q psy1596 355 NSIAFNPS 362 (375)
Q Consensus 355 DSi~~d~H 362 (375)
|-+.+|.|
T Consensus 130 d~v~iSvk 137 (404)
T TIGR03278 130 REVSFTVF 137 (404)
T ss_pred CEEEEecc
Confidence 77777765
No 466
>PRK09314 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=25.58 E-value=1.3e+02 Score=30.30 Aligned_cols=50 Identities=14% Similarity=0.127 Sum_probs=36.1
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
+-|.+++-.+-.|..|..|++-.- +..|...+.+++.++|++|++.+ ++.
T Consensus 142 hTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~-isi 191 (339)
T PRK09314 142 HTEGSVDLCKLAGLKPVAVICEIM-KEDGTMARRDDLEDFAKKHNLKM-IYV 191 (339)
T ss_pred CCchhhHHHHHcCCCceEEEEEEe-cCCCCcccHHHHHHHHHHcCCcE-EEH
Confidence 345555555667777877777764 45688888899999999998887 443
No 467
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=25.06 E-value=3.7e+02 Score=24.77 Aligned_cols=90 Identities=21% Similarity=0.189 Sum_probs=45.5
Q ss_pred cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh---c--CCEEEEecccccCccc-----------
Q psy1596 277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK---E--GLWLHVDAAYAGSSFI----------- 340 (375)
Q Consensus 277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~---~--~iwlHVDaA~gg~~~~----------- 340 (375)
...+.|.++|++..+.. ....|+... ++..|....+++|.+..++ . -++-++|++.+++..+
T Consensus 29 ~~~~~l~~~l~~a~~d~-~ik~vvL~~-~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy~lasaad~I~a~p 106 (222)
T cd07018 29 LSLRDLLEALEKAAEDD-RIKGIVLDL-DGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQYYLASAADEIYLNP 106 (222)
T ss_pred ccHHHHHHHHHHHhcCC-CeEEEEEEC-CCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhhhhhhhCCEEEECC
Confidence 45566666665543322 123444443 3445566666666554432 1 2455566544443221
Q ss_pred ------------chhhhhhhc--CCCcccEEEEcCcccCCCCC
Q psy1596 341 ------------CPEFRKWLA--GVEYANSIAFNPSKWLMVHF 369 (375)
Q Consensus 341 ------------~~~~~~~~~--gie~aDSi~~d~HK~l~~P~ 369 (375)
.+.++.+++ |+ ..+.+..-.+|-.+-||
T Consensus 107 ~~~vg~iGv~~~~~~~~~ll~klGv-~~~~~~~G~~K~~~~~~ 148 (222)
T cd07018 107 SGSVELTGLSAETLFFKGLLDKLGV-EVQVFRVGEYKSAVEPF 148 (222)
T ss_pred CceEEeeccchhhhhHHHHHHHcCC-cEEEEEEeccccccchh
Confidence 122333332 44 47788888888777666
No 468
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=24.78 E-value=1.3e+02 Score=31.45 Aligned_cols=52 Identities=23% Similarity=0.228 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccHHHHHHHHH-hcCCEEEEe
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNLEELGPICE-KEGLWLHVD 331 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl~eI~~ia~-~~~iwlHVD 331 (375)
+-++|+++|.+-.++-. |-+|+ ..+|=.++.| |||+.+++-++ +++++++.=
T Consensus 81 ~~~~L~~~i~ei~~~~~-p~~if-v~~TC~t~iIGdDle~va~~~~~~~gipVV~v 134 (457)
T CHL00073 81 DYEELKRLCLQIKKDRN-PSVIV-WIGTCTTEIIKMDLEGMAPKLEAEIGIPIVVA 134 (457)
T ss_pred CHHHHHHHHHHHHHhCC-CCEEE-EEccCcHHhhccCHHHHHHHHHHhhCCCEEEE
Confidence 34688888887665543 43322 2233455666 99999987554 789876643
No 469
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=24.12 E-value=2.6e+02 Score=27.35 Aligned_cols=79 Identities=15% Similarity=0.171 Sum_probs=45.6
Q ss_pred cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-cccccHHHHHH-HHHhcC----CEEEEecccccCcccchhhhhhhcC
Q psy1596 277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-CAFDNLEELGP-ICEKEG----LWLHVDAAYAGSSFICPEFRKWLAG 350 (375)
Q Consensus 277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-GavDpl~eI~~-ia~~~~----iwlHVDaA~gg~~~~~~~~~~~~~g 350 (375)
.+.+.++..|+...+.+ .|+++-..-++... +..+.+..+++ +++++. +.||.| ||...-.+ .+-.-.|
T Consensus 26 ~n~e~~~avi~AAe~~~-sPvIiq~~~~~~~~~~~~~~~~~~~~~~a~~~~~~VPV~lHLD--Hg~~~e~i--~~ai~~G 100 (285)
T PRK07709 26 NNLEWTQAILAAAEEEK-SPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLD--HGSSFEKC--KEAIDAG 100 (285)
T ss_pred CCHHHHHHHHHHHHHHC-CCEEEEcCcchhhhcCCHHHHHHHHHHHHHHcCCCCcEEEECC--CCCCHHHH--HHHHHcC
Confidence 47788888887654433 47666555554444 34455554443 455554 789999 44431111 1222234
Q ss_pred CCcccEEEEcCcc
Q psy1596 351 VEYANSIAFNPSK 363 (375)
Q Consensus 351 ie~aDSi~~d~HK 363 (375)
++||-+|+..
T Consensus 101 ---ftSVM~DgS~ 110 (285)
T PRK07709 101 ---FTSVMIDASH 110 (285)
T ss_pred ---CCEEEEeCCC
Confidence 5999999987
No 470
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=24.11 E-value=71 Score=34.72 Aligned_cols=45 Identities=9% Similarity=-0.112 Sum_probs=36.6
Q ss_pred hcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccC
Q psy1596 291 KKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGS 337 (375)
Q Consensus 291 ~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~ 337 (375)
.=|+.+. -.=+++...|.-|+++++++-|++.||-+++|-.++=+
T Consensus 195 sWGYq~~--g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 195 SWGYQGT--GYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred CCCCCcc--eeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 3466653 34457788999999999999999999999999987653
No 471
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=24.10 E-value=5.3e+02 Score=26.96 Aligned_cols=66 Identities=14% Similarity=0.056 Sum_probs=44.1
Q ss_pred cC-CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc--CCEEEEeccccc
Q psy1596 262 GL-VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE--GLWLHVDAAYAG 336 (375)
Q Consensus 262 g~-~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~--~iwlHVDaA~gg 336 (375)
.| .++..+... ...++.+++.+.|.+. .|-+|..|. .+..+....++++.+|+. ++.+.+=|.|+.
T Consensus 35 ~G~~~V~iiD~~-~~~~~~~~~~~~l~~~-----~pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 35 AGYHDVTFLDAM-TGPLTDEKLVERLRAH-----CPDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred cCCcceEEeccc-ccCCCHHHHHHHHHhc-----CcCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 45 466666542 2357778888877653 255666653 345677788899988886 899987776644
No 472
>PRK12485 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=23.95 E-value=1.6e+02 Score=29.91 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=44.3
Q ss_pred eEEEEecCCCCCc-CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 265 KMRYIESDDKLSL-RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 265 ~v~~Vp~d~~g~m-d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
.+.++-..+.|-+ ..-+-|.+++-.+-.|..|..|++..- +..|...+.+++..+|++|++.+ ++.
T Consensus 126 Hvfpl~a~~ggvl~R~GhtEaavdL~~lAgl~p~avi~ei~-~~dg~m~~~~~~~~fA~~h~l~~-i~i 192 (369)
T PRK12485 126 HIFPLRAREGGVLTRAGHTEAGCDLARLAGFSPASVIVEVM-NDDGTMARRPDLEVFAAKHGIKI-GTI 192 (369)
T ss_pred eeCeEEecCCCCCCCCChHHHHHHHHHHcCCCceEEEEEEe-cCCCCccChHHHHHHHHHcCCcE-EEH
Confidence 3444444444332 334556777666677888887777764 45588888999999999999887 444
No 473
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=23.79 E-value=70 Score=33.31 Aligned_cols=30 Identities=13% Similarity=0.050 Sum_probs=26.2
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEeccc
Q psy1596 305 TTGACAFDNLEELGPICEKEGLWLHVDAAY 334 (375)
Q Consensus 305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~ 334 (375)
.+..|.-++++++++-|+++|+.+++|.+.
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 356788899999999999999999999974
No 474
>cd02911 arch_FMN Archeal FMN-binding domain. This family of archaeal proteins are part of the NAD(P)H-dependent flavin oxidoreductase (oxidored) FMN-binding family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN. The specific function of this group is unknown.
Probab=23.78 E-value=2.5e+02 Score=26.28 Aligned_cols=53 Identities=34% Similarity=0.366 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCC-EEEEeccccc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGL-WLHVDAAYAG 336 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~i-wlHVDaA~gg 336 (375)
|++.+.+.++.-++. ..|+.|=...|.+ ++..++++.+++.|+ +||+|..+.+
T Consensus 124 ~p~~l~eiv~avr~~-~~pVsvKir~g~~-----~~~~~la~~l~~aG~d~ihv~~~~~g 177 (233)
T cd02911 124 DPERLSEFIKALKET-GVPVSVKIRAGVD-----VDDEELARLIEKAGADIIHVDAMDPG 177 (233)
T ss_pred CHHHHHHHHHHHHhc-CCCEEEEEcCCcC-----cCHHHHHHHHHHhCCCEEEECcCCCC
Confidence 566666666654433 3455454444432 456667776666654 5777766544
No 475
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=23.72 E-value=1.9e+02 Score=29.96 Aligned_cols=57 Identities=19% Similarity=0.055 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhhhcCCccEEEEEEcCCCCccc--cccHHHHHHHHHhcCCEEEEeccccc
Q psy1596 279 GDKLIEAIERDKKKHLIPFFVCGTLGTTGACA--FDNLEELGPICEKEGLWLHVDAAYAG 336 (375)
Q Consensus 279 ~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa--vDpl~eI~~ia~~~~iwlHVDaA~gg 336 (375)
.+...++++++.+.|. ..+|+.+.|-.+.|. ...-++|.++|+++|+.+.=-.+.|.
T Consensus 74 ~~~~~~~l~e~~~~gv-~~~vi~s~gf~e~g~~g~~~~~~l~~~a~~~girvlGPnc~G~ 132 (447)
T TIGR02717 74 AKYVPQVVEECGEKGV-KGAVVITAGFKEVGEEGAELEQELVEIARKYGMRLLGPNCLGI 132 (447)
T ss_pred HHHHHHHHHHHHhcCC-CEEEEECCCccccCcchHHHHHHHHHHHHHcCCEEEecCeeeE
Confidence 4556666666666664 456788888888774 22347899999999999887776665
No 476
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=23.61 E-value=5.5e+02 Score=23.14 Aligned_cols=75 Identities=13% Similarity=0.076 Sum_probs=42.0
Q ss_pred eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~ 322 (375)
.++++-+. .....+.+.-.+..++....+ |.+.|+++++... .|+...+......++--..|++.|+
T Consensus 25 V~~l~R~~-~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~g~d-------~v~~~~~~~~~~~~~~~~~li~Aa~ 91 (233)
T PF05368_consen 25 VRALVRDP-SSDRAQQLQALGAEVVEADYD-----DPESLVAALKGVD-------AVFSVTPPSHPSELEQQKNLIDAAK 91 (233)
T ss_dssp EEEEESSS-HHHHHHHHHHTTTEEEES-TT------HHHHHHHHTTCS-------EEEEESSCSCCCHHHHHHHHHHHHH
T ss_pred cEEEEecc-chhhhhhhhcccceEeecccC-----CHHHHHHHHcCCc-------eEEeecCcchhhhhhhhhhHHHhhh
Confidence 34555444 222233333346665543333 8899999887432 4555555444556667778888899
Q ss_pred hcCCEEEE
Q psy1596 323 KEGLWLHV 330 (375)
Q Consensus 323 ~~~iwlHV 330 (375)
+.|+...|
T Consensus 92 ~agVk~~v 99 (233)
T PF05368_consen 92 AAGVKHFV 99 (233)
T ss_dssp HHT-SEEE
T ss_pred ccccceEE
Confidence 98876555
No 477
>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional
Probab=23.39 E-value=1.6e+02 Score=31.50 Aligned_cols=50 Identities=20% Similarity=0.216 Sum_probs=36.9
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
+-|.+++-.+-.|..|..|++..- +..|...+++++.++|++|++.+ ++.
T Consensus 147 HTEAAVDLarLAGL~PaaVicEi~-~~dG~mar~~~l~~fA~~h~L~i-isi 196 (555)
T PRK09319 147 HTEAAVDLARLAGLYPAGVICEIQ-NPDGSMARLPELKEYAKQHGLKL-ISI 196 (555)
T ss_pred hHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcE-EEh
Confidence 346666666667888887777764 44588888889999999998887 443
No 478
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=23.32 E-value=1.7e+02 Score=29.93 Aligned_cols=48 Identities=13% Similarity=0.044 Sum_probs=32.6
Q ss_pred HHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 283 IEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 283 e~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
|.+++-.+-+|..|..|++-.- +..|.....+++.++|++|++.+ ++.
T Consensus 131 EaavdL~~lAGl~p~~vicei~-~~dG~m~~~~~~~~fA~~h~l~~-i~i 178 (387)
T PRK09318 131 EASLELSELLGFKRYAVIVEIL-DEKGDSHDLDYVLKLAEKFSLPV-LEI 178 (387)
T ss_pred HHHHHHHHHcCCCceEEEEEEe-cCCCccccHHHHHHHHHHCCCcE-EEH
Confidence 5555555566777777666652 34577778888888888888877 443
No 479
>PLN02522 ATP citrate (pro-S)-lyase
Probab=22.95 E-value=2.5e+02 Score=30.48 Aligned_cols=75 Identities=16% Similarity=0.093 Sum_probs=49.3
Q ss_pred CCchHHHHHHHHc-C--CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCC
Q psy1596 250 QAHSSVEKAGLIG-L--VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGL 326 (375)
Q Consensus 250 ~aH~Sv~kaa~lg-~--~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~i 326 (375)
.-+.++.+|+.-. + ..++.||.. .+...+++.+.++| ++.+|+.|.|-.+.+ ..+|.++|+++|+
T Consensus 64 PVf~tv~eA~~~~~~~~~~vifvp~~-------~a~da~lEa~~a~G-Ik~~VIiteGfpe~d----~~~l~~~Ar~~g~ 131 (608)
T PLN02522 64 PVHGSIEAACKAHPTADVFINFASFR-------SAAASSMEALKQPT-IRVVAIIAEGVPESD----TKQLIAYARANNK 131 (608)
T ss_pred cccchHHHHHHhCCCCcEEEEeCChH-------HhHHHHHHHHhhCC-CCEEEEECCCCChhh----HHHHHHHHHHcCC
Confidence 4567888888543 4 345666642 33445555544445 466888888877654 7899999999999
Q ss_pred EEEEeccccc
Q psy1596 327 WLHVDAAYAG 336 (375)
Q Consensus 327 wlHVDaA~gg 336 (375)
.|+==.+.|.
T Consensus 132 rlIGPNc~Gi 141 (608)
T PLN02522 132 VVIGPATVGG 141 (608)
T ss_pred EEECCCCCee
Confidence 8874444444
No 480
>PRK05773 3,4-dihydroxy-2-butanone 4-phosphate synthase; Validated
Probab=22.71 E-value=1.9e+02 Score=27.21 Aligned_cols=47 Identities=17% Similarity=-0.005 Sum_probs=35.7
Q ss_pred HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEE
Q psy1596 281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLH 329 (375)
Q Consensus 281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlH 329 (375)
+-|..++-.+-.|..|..|++-.-+ . |..-..+++.+++++||+.+.
T Consensus 162 HTEasvdLa~lAGl~P~~vicEil~-~-~~~~~~~~~~~fA~~~~l~~i 208 (219)
T PRK05773 162 HTELSIALAQAAGLEPSAVIAEMLD-E-KLSLSKEKAKKIAKNLGFPLV 208 (219)
T ss_pred hhHHHHHHHHHcCCCccEEEEEEeC-C-CCCcCHHHHHHHHHHcCCcEE
Confidence 4566666666778889888877754 3 346689999999999999883
No 481
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=22.70 E-value=4.4e+02 Score=26.22 Aligned_cols=53 Identities=17% Similarity=0.193 Sum_probs=33.7
Q ss_pred CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEE
Q psy1596 274 KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHV 330 (375)
Q Consensus 274 ~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHV 330 (375)
...|+.+.+++.|++..+.|. ..|..+.|.. + .-.++.+|.+.+++.++.+.+
T Consensus 43 ~~~~~~e~~~~ii~~~~~~g~--~~v~~~GGEP-l-l~~~~~~il~~~~~~g~~~~i 95 (378)
T PRK05301 43 GAELSTEEWIRVLREARALGA--LQLHFSGGEP-L-LRKDLEELVAHARELGLYTNL 95 (378)
T ss_pred cCCCCHHHHHHHHHHHHHcCC--cEEEEECCcc-C-CchhHHHHHHHHHHcCCcEEE
Confidence 356888888888877655442 3455554432 2 235588888888888875543
No 482
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=22.27 E-value=2e+02 Score=28.08 Aligned_cols=52 Identities=17% Similarity=0.088 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy1596 280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAG 336 (375)
Q Consensus 280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg 336 (375)
+.+.++++++.++|. ..+|+.+.|-. ..+-++|.++|+++|+.+.==.+.|.
T Consensus 76 ~~v~~~l~e~~~~gv-k~avI~s~Gf~----~~~~~~l~~~a~~~girvlGPNc~Gi 127 (291)
T PRK05678 76 PFAADAILEAIDAGI-DLIVCITEGIP----VLDMLEVKAYLERKKTRLIGPNCPGI 127 (291)
T ss_pred HHHHHHHHHHHHCCC-CEEEEECCCCC----HHHHHHHHHHHHHcCCEEECCCCCcc
Confidence 455556666666553 55788888742 23334899999999998875445444
No 483
>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=21.89 E-value=6.8e+02 Score=24.50 Aligned_cols=17 Identities=12% Similarity=0.100 Sum_probs=11.3
Q ss_pred EEEeCChHHHHHHHHHH
Q psy1596 202 ITFQTTASESTLICLLA 218 (375)
Q Consensus 202 GvftsGGT~Anl~AL~a 218 (375)
.++|.++|.+|...-.+
T Consensus 72 ~vv~~~~ssGN~g~alA 88 (329)
T PRK14045 72 VVITVGAVHSNHAFVTG 88 (329)
T ss_pred EEEEeCccHHHHHHHHH
Confidence 47777888888744433
No 484
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=21.89 E-value=4.2e+02 Score=21.15 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=42.2
Q ss_pred ceEEEecCCCchHHHHHHHH--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596 242 RLVAYCSDQAHSSVEKAGLI--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG 318 (375)
Q Consensus 242 ~~vV~~S~~aH~Sv~kaa~l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~ 318 (375)
+.+||....+++|..---.| .+.....+.+|.+ -+..++++++.+.......|.+. . +....|..|++.++-
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~--~~~~~~~~~l~~~tg~~tvP~Vf--i-~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKE--PAGKDIENALSRLGCSPAVPAVF--V-GGKLVGGLENVMALH 82 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCC--ccHHHHHHHHHHhcCCCCcCeEE--E-CCEEEcCHHHHHHHH
Confidence 45777777888877433223 3455566666532 23456667776544444567543 2 336678888877663
No 485
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=21.70 E-value=1.2e+02 Score=28.84 Aligned_cols=49 Identities=14% Similarity=0.136 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAA 333 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA 333 (375)
+++++++.+.... ++++..|+-....++.+..+.+.+++++.++.+|..
T Consensus 44 ~~~e~~~~~~~~~-------alvi~~G~l~~~~~~~i~~~~~~a~~~~~pvVlDpv 92 (263)
T PRK09355 44 APEEAEEMAKIAG-------ALVINIGTLTEERIEAMLAAGKIANEAGKPVVLDPV 92 (263)
T ss_pred CHHHHHHHHHhcC-------ceEEeCCCCCHHHHHHHHHHHHHHHhcCCCEEECCc
Confidence 5677777775432 455666655444445566666778899999999974
No 486
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []. Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....
Probab=21.37 E-value=84 Score=30.07 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAG 336 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg 336 (375)
.++++++..+.. -.++.+.||-..-.++-+...++.++++++++..|=.=.|
T Consensus 39 ~~~E~~e~~~~a-------~al~iNiGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvG 90 (246)
T PF02110_consen 39 APEEVEEFASIA-------DALVINIGTLTDERIEAMKKAAKAANELGIPVVLDPVGVG 90 (246)
T ss_dssp STTTHHHHHHCT-------SEEEEESTTSSHHHHHHHHHHHHHHHHTT--EEEE-TTBT
T ss_pred CHHHHHHHHHHc-------CEEEEECCCCCHhHHHHHHHHHHHHHHcCCCEEEeCcccC
Confidence 345566655422 2799999988877888999999999999999999975433
No 487
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=21.37 E-value=78 Score=30.22 Aligned_cols=14 Identities=21% Similarity=0.192 Sum_probs=8.9
Q ss_pred CCc-CHHHHHHHHHH
Q psy1596 275 LSL-RGDKLIEAIER 288 (375)
Q Consensus 275 g~m-d~e~Le~aI~~ 288 (375)
|+| |.+.|++.|++
T Consensus 50 G~lg~~~~l~~~l~~ 64 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRE 64 (249)
T ss_pred CCCCCHHHHHHHHHh
Confidence 456 77777666654
No 488
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=21.15 E-value=4.9e+02 Score=21.68 Aligned_cols=49 Identities=20% Similarity=0.185 Sum_probs=36.5
Q ss_pred CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL 314 (375)
Q Consensus 263 ~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl 314 (375)
+.++..++.| --|.+.+++.+++-.+.....-+++.++|....+.++++
T Consensus 51 ~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~ 99 (167)
T PF00106_consen 51 GAKITFIECD---LSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDL 99 (167)
T ss_dssp TSEEEEEESE---TTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGS
T ss_pred cccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 5788888876 248889999988766444445578888888888877654
No 489
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=20.70 E-value=2.6e+02 Score=23.07 Aligned_cols=49 Identities=18% Similarity=0.130 Sum_probs=30.5
Q ss_pred CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccc
Q psy1596 278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYA 335 (375)
Q Consensus 278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~g 335 (375)
.++.+.+.+++..+.|.. .++...| ..-+++.++|+++|+.+.-..+.|
T Consensus 64 ~~~~~~~~v~~~~~~g~~--~v~~~~g-------~~~~~~~~~a~~~gi~vigp~C~g 112 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVK--AVWLQPG-------AESEELIEAAREAGIRVIGPNCLG 112 (116)
T ss_dssp -HHHHHHHHHHHHHHT-S--EEEE-TT-------S--HHHHHHHHHTT-EEEESS-HH
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEEcc-------hHHHHHHHHHHHcCCEEEeCCcce
Confidence 456667777776666632 5666655 556789999999999988676654
No 490
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=20.54 E-value=6.5e+02 Score=26.82 Aligned_cols=107 Identities=19% Similarity=0.155 Sum_probs=62.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEE-EecCCCchH--HH----HHH-HHcCCeEEEE
Q psy1596 198 PPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA-YCSDQAHSS--VE----KAG-LIGLVKMRYI 269 (375)
Q Consensus 198 ~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV-~~S~~aH~S--v~----kaa-~lg~~~v~~V 269 (375)
+...|+|.|||-.+.++|..+++.... .... |.-...+.. =. +.+ .++. ..+.+
T Consensus 230 dvpvg~~lSGGlDSS~Iaa~a~~~~~~-----------------~~~~~fsvg~~~~~~~D~~~a~~~A~~lg~-~h~~~ 291 (542)
T COG0367 230 DVPVGVFLSGGLDSSLIAAIAAEELGK-----------------EGKTTFTVGFEDSDSPDAKYARAVAKFLGT-PHHEI 291 (542)
T ss_pred CCcEEEEeCCCccHHHHHHHHHHhccc-----------------cceeeeEeecCCCCCchHHHHHHHHHHhCC-CcEEE
Confidence 345799999999998888777665210 0010 222222221 11 122 2444 44444
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEE-----ecccccC
Q psy1596 270 ESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHV-----DAAYAGS 337 (375)
Q Consensus 270 p~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHV-----DaA~gg~ 337 (375)
. +.++++.+++.+-.. ..-.....++..|+--+++.+++++.++.. |.-+||.
T Consensus 292 ~------~~~~e~~~~~~~vv~---------~~~~p~~~~~~~ply~~~~~a~~~g~kVvLSGeGADElFgGY 349 (542)
T COG0367 292 I------LTNEELLNALPEVVK---------ALDTPGGMAASIPLYLLSRKARAEGEKVVLSGEGADELFGGY 349 (542)
T ss_pred e------ecHHHHHHHHHHHHh---------hcCCCCcccchhHHHHHHHhhhhcCcEEeecCccHHHHhcCC
Confidence 3 456677777654321 111112266778899999999999988887 4568887
No 491
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=20.33 E-value=2e+02 Score=29.40 Aligned_cols=48 Identities=15% Similarity=0.002 Sum_probs=30.1
Q ss_pred CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEec
Q psy1596 276 SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDA 332 (375)
Q Consensus 276 ~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDa 332 (375)
.-|++.|+++++... |.+|++-.+|.. |++++++++|++||..+.+=+
T Consensus 200 ~kD~eVLeaaLe~~~--G~kpLL~SAt~e-------~Ny~~ia~lAk~yg~~Vvv~s 247 (389)
T TIGR00381 200 EKDPLVLEKAAEVAE--GERCLLASANLD-------LDYEKIANAAKKYGHVVLSWT 247 (389)
T ss_pred cCCHHHHHHHHHHhC--CCCcEEEecCch-------hhHHHHHHHHHHhCCeEEEEc
Confidence 457888888877653 334543333322 178888888888887776544
No 492
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only]
Probab=20.23 E-value=3.1e+02 Score=29.23 Aligned_cols=197 Identities=14% Similarity=0.128 Sum_probs=97.7
Q ss_pred cccCCCCCceeecCCCCChHHHHH-----HHHH------HhhccccccchhhhhhhhhhccccCCccchhhhhccccccc
Q psy1596 38 ITHWQSPYMHAYFPALNSYPSLLG-----DMLS------DAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACS 106 (375)
Q Consensus 38 ~~~~~~p~~~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 106 (375)
...=+||+|.|-+.+..|-+.+=. |++- +=+|..+|+..-. .+.+.++.|-.+
T Consensus 249 ~idEs~P~y~GvY~G~~s~~~vre~vE~aD~il~iG~~ltD~~Tg~Ft~~~~----------------~~~~i~~~~~~v 312 (557)
T COG3961 249 VIDESHPNYLGVYNGKLSEPEVREAVESADLILTIGVLLTDFNTGGFTYQYK----------------PANIIEIHPDSV 312 (557)
T ss_pred cccccCCCeeeEEecccCCHHHHHHhhcCCEEEEeceEEeeccccceeeecC----------------cccEEEeccCee
Confidence 344589999999999988776521 2111 1133444443211 123344444444
Q ss_pred cccccccccccccccCCCCCchhhhhhHHHHhhhcccccc-ccc-CCCch--hhcchhHHH-HHHHHHHHHHcCCCCCCC
Q psy1596 107 TTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVT-EAD-KGNSI--VILDRDKYS-SKVLDFVSKENATPTKDP 181 (375)
Q Consensus 107 ~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~-~gd~~--~~~g~~~le-~~v~~wLa~llG~p~~~~ 181 (375)
.+-+..| .+..+..+..++.+.+...+.... ..+ ...+. ...+...+. +.+-+.+.+++
T Consensus 313 ~I~~~~f---------~~l~m~~~L~~L~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~pLtq~~~w~~~~~fl------- 376 (557)
T COG3961 313 KIKDAVF---------TNLSMKDALQELAKKIDKRNLSAPPVAYPARTPPTPYPPANEPLTQEWLWNTVQNFL------- 376 (557)
T ss_pred Eeccccc---------CCeeHHHHHHHHHHHhhhcccCCCCccCCCCCCCCCCCCCCCcccHHHHHHHHHhhC-------
Confidence 4443333 335566677777777777664322 111 11111 111111111 33444454443
Q ss_pred CCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHH--H
Q psy1596 182 TPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKA--G 259 (375)
Q Consensus 182 ~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka--a 259 (375)
.++..+++-+||..- .+.+-. .|+..-+.++.-.-|+--. +
T Consensus 377 ----------------~p~dviiaetGtS~F-----G~~~~~----------------lP~~~~~i~Q~lWGSIG~t~pA 419 (557)
T COG3961 377 ----------------KPGDVIIAETGTSFF-----GALDIR----------------LPKGATFISQPLWGSIGYTLPA 419 (557)
T ss_pred ----------------CCCCEEEEccccccc-----cceeee----------------cCCCCeEEcccchhhcccccHh
Confidence 345678888777531 011100 1222334455444333322 2
Q ss_pred H----Hc--CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc-CCCC
Q psy1596 260 L----IG--LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL-GTTG 307 (375)
Q Consensus 260 ~----lg--~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~ 307 (375)
. ++ ..+++.+--|...+|.+.++-..|+. |.+|.+++.+- |-|.
T Consensus 420 alGa~~A~~drR~IL~iGDGs~QlTvQEiStmiR~----gl~p~ifvlNN~GYTI 470 (557)
T COG3961 420 ALGAALAAPDRRVILFIGDGSLQLTVQEISTMIRW----GLKPIIFVLNNDGYTI 470 (557)
T ss_pred hhhhhhcCCCccEEEEEcCchhhhhHHHHHHHHHc----CCCcEEEEEcCCCcEE
Confidence 2 22 23455555577778888888887754 56687766654 4443
No 493
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=20.23 E-value=5.9e+02 Score=24.61 Aligned_cols=69 Identities=17% Similarity=0.112 Sum_probs=35.2
Q ss_pred CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCC--EEEEec
Q psy1596 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGL--WLHVDA 332 (375)
Q Consensus 263 ~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~i--wlHVDa 332 (375)
+.+++.+.+-.. ..+++.+++.++...+.+...++-+...|....+..+.+.++.+.|+++|+ .+|++.
T Consensus 124 gi~~~li~~~~r-~~~~~~~~~~~~~~~~~~~~~vvg~~l~~~e~~~~~~~~~~~~~~A~~~g~~i~~Ha~E 194 (324)
T TIGR01430 124 GIKSRLILCGMR-HKQPEAAEETLELAKPYKEQTIVGFGLAGDERGGPPPDFVRAFAIARELGLHLTVHAGE 194 (324)
T ss_pred CCeEEEEEEEeC-CCCHHHHHHHHHHHHhhccCcEEEecCCCCCCCCCHHHHHHHHHHHHHCCCCeEEecCC
Confidence 445544443111 135677777776544322111111122233334446678888888998864 556654
No 494
>KOG2790|consensus
Probab=20.20 E-value=5e+02 Score=25.85 Aligned_cols=78 Identities=14% Similarity=0.018 Sum_probs=43.2
Q ss_pred eEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCC-cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-cccHHHHH
Q psy1596 243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLS-LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-FDNLEELG 318 (375)
Q Consensus 243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~-md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-vDpl~eI~ 318 (375)
..|++...+--+.++|-+++..+.+..+..+ .|+ .|.+.++.-. + + ..|-.+..-|..|. +|++.
T Consensus 101 dYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~--d---a---~yvyyCaNETVHGVEf~~~P--- 169 (370)
T KOG2790|consen 101 DYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNP--D---A---SYVYYCANETVHGVEFDFIP--- 169 (370)
T ss_pred ceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCC--C---c---cEEEEecCceeeceecCCCC---
Confidence 4678888888888888888876555444321 112 3444433221 1 1 15666666677775 45444
Q ss_pred HHHHhcCCEEEEec
Q psy1596 319 PICEKEGLWLHVDA 332 (375)
Q Consensus 319 ~ia~~~~iwlHVDa 332 (375)
+-.-.+..+..|-
T Consensus 170 -~~~~~~~vlVaDm 182 (370)
T KOG2790|consen 170 -VNDPKGAVLVADM 182 (370)
T ss_pred -CCCCCCceEEEec
Confidence 2223456666664
No 495
>PRK06687 chlorohydrolase; Validated
Probab=20.11 E-value=2.5e+02 Score=28.38 Aligned_cols=53 Identities=19% Similarity=0.110 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCE--EEEec
Q psy1596 280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLW--LHVDA 332 (375)
Q Consensus 280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iw--lHVDa 332 (375)
+..++.+++....+...+-+..+.-+..+++-+-+.++.++|+++|+. +|+++
T Consensus 164 ~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e 218 (419)
T PRK06687 164 SRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAE 218 (419)
T ss_pred HHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 345555554322222123334444444567778899999999998765 45543
Done!