Query psy15960
Match_columns 177
No_of_seqs 242 out of 1685
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 17:27:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vk8_A Pyruvate decarboxylase 99.9 3.5E-24 1.2E-28 192.2 11.4 151 25-177 319-471 (563)
2 3eya_A Pyruvate dehydrogenase 99.9 4.2E-24 1.4E-28 191.5 10.9 106 67-177 354-460 (549)
3 1ovm_A Indole-3-pyruvate decar 99.9 6.3E-24 2.1E-28 190.1 11.5 145 25-177 317-462 (552)
4 2vbi_A Pyruvate decarboxylase; 99.9 6.6E-24 2.3E-28 190.7 11.5 151 17-177 310-463 (566)
5 2wvg_A PDC, pyruvate decarboxy 99.9 3.7E-24 1.3E-28 192.4 9.8 151 17-177 310-467 (568)
6 1ybh_A Acetolactate synthase, 99.9 1.7E-23 5.8E-28 189.0 11.2 107 67-177 374-480 (590)
7 2q28_A Oxalyl-COA decarboxylas 99.9 1.3E-23 4.4E-28 188.6 10.0 107 66-177 366-474 (564)
8 2c31_A Oxalyl-COA decarboxylas 99.9 1.3E-23 4.4E-28 188.9 9.9 106 67-177 372-479 (568)
9 2pgn_A Cyclohexane-1,2-dione h 99.9 3E-23 1E-27 187.4 11.1 107 66-177 371-478 (589)
10 2vbf_A Branched-chain alpha-ke 99.9 2.9E-23 9.9E-28 186.7 10.3 149 17-177 329-479 (570)
11 1v5e_A Pyruvate oxidase; oxido 99.9 2.8E-23 9.5E-28 187.8 10.1 106 67-177 361-467 (590)
12 2pan_A Glyoxylate carboligase; 99.9 4.2E-23 1.4E-27 187.3 11.2 106 67-177 390-496 (616)
13 4feg_A Pyruvate oxidase; carba 99.9 3.3E-23 1.1E-27 187.7 10.4 108 65-177 366-474 (603)
14 1ozh_A ALS, acetolactate synth 99.9 5.6E-23 1.9E-27 184.9 11.6 106 67-177 367-474 (566)
15 2iht_A Carboxyethylarginine sy 99.9 6.2E-23 2.1E-27 184.7 10.7 106 67-177 379-490 (573)
16 1q6z_A BFD, BFDC, benzoylforma 99.9 9.1E-23 3.1E-27 181.8 11.2 105 67-177 350-455 (528)
17 2uz1_A Benzaldehyde lyase; thi 99.9 6.8E-23 2.3E-27 184.0 10.3 106 69-177 369-475 (563)
18 2nxw_A Phenyl-3-pyruvate decar 99.9 7.9E-23 2.7E-27 183.9 9.6 142 25-177 330-476 (565)
19 1t9b_A Acetolactate synthase, 99.9 1.4E-22 4.7E-27 186.3 10.3 106 67-177 458-567 (677)
20 2x7j_A 2-succinyl-5-enolpyruvy 99.9 7.7E-22 2.6E-26 178.7 9.8 105 67-177 402-508 (604)
21 3hww_A 2-succinyl-5-enolpyruvy 99.8 9E-21 3.1E-25 170.2 10.3 105 66-177 363-469 (556)
22 3lq1_A 2-succinyl-5-enolpyruvy 99.8 7.5E-21 2.6E-25 171.4 6.3 105 66-177 382-488 (578)
23 2c42_A Pyruvate-ferredoxin oxi 99.6 2E-15 6.7E-20 146.3 7.1 106 72-177 816-990 (1231)
24 2o1x_A 1-deoxy-D-xylulose-5-ph 99.5 5.8E-14 2E-18 128.0 9.7 107 71-177 57-183 (629)
25 2o1s_A 1-deoxy-D-xylulose-5-ph 99.4 6.7E-13 2.3E-17 120.8 10.9 108 70-177 54-181 (621)
26 1umd_A E1-alpha, 2-OXO acid de 99.4 4.5E-13 1.5E-17 115.0 8.0 61 117-177 142-204 (367)
27 2bfd_A 2-oxoisovalerate dehydr 99.4 8.9E-13 3E-17 114.5 7.9 61 117-177 160-222 (400)
28 1w85_A Pyruvate dehydrogenase 99.4 1.1E-12 3.9E-17 112.7 8.1 63 115-177 138-202 (368)
29 1qs0_A 2-oxoisovalerate dehydr 99.3 2.5E-12 8.5E-17 112.0 7.8 61 117-177 179-241 (407)
30 2ozl_A PDHE1-A type I, pyruvat 99.3 4.3E-12 1.5E-16 109.1 7.9 62 116-177 137-200 (365)
31 3l84_A Transketolase; TKT, str 99.3 7.9E-12 2.7E-16 114.1 8.5 61 117-177 112-181 (632)
32 3mos_A Transketolase, TK; thia 99.2 2E-11 6.8E-16 111.2 7.1 61 117-177 119-182 (616)
33 3uk1_A Transketolase; structur 99.2 4.1E-11 1.4E-15 110.6 8.1 61 117-177 153-225 (711)
34 1itz_A Transketolase; calvin c 99.2 1.9E-11 6.4E-16 112.4 5.7 62 116-177 124-197 (675)
35 3kom_A Transketolase; rossmann 99.2 5.2E-11 1.8E-15 109.2 8.3 61 117-177 114-186 (663)
36 2e6k_A Transketolase; structur 99.2 2.1E-11 7.3E-16 111.6 5.7 62 116-177 115-188 (651)
37 3m49_A Transketolase; alpha-be 99.2 4.7E-11 1.6E-15 110.0 8.0 61 117-177 138-210 (690)
38 2r8o_A Transketolase 1, TK 1; 99.1 4.6E-11 1.6E-15 109.7 5.9 63 115-177 110-184 (669)
39 1gpu_A Transketolase; transfer 99.1 1.4E-10 4.9E-15 106.6 8.8 62 116-177 113-186 (680)
40 1r9j_A Transketolase; domains, 99.0 3.9E-10 1.3E-14 103.6 8.7 62 116-177 113-186 (673)
41 2yic_A 2-oxoglutarate decarbox 98.6 2.3E-08 8E-13 94.1 3.5 60 118-177 244-319 (868)
42 3rim_A Transketolase, TK; TPP, 98.5 9.9E-08 3.4E-12 88.0 6.8 61 117-177 131-207 (700)
43 2qtc_A Pyruvate dehydrogenase 98.5 1.3E-07 4.4E-12 89.3 6.2 63 115-177 188-259 (886)
44 2xt6_A 2-oxoglutarate decarbox 98.4 1.2E-07 4E-12 91.4 4.6 60 118-177 489-564 (1113)
45 2jgd_A 2-oxoglutarate dehydrog 98.3 3.1E-07 1E-11 87.1 4.8 60 118-177 320-390 (933)
46 3ahc_A Phosphoketolase, xylulo 96.1 0.0049 1.7E-07 57.9 4.6 34 117-154 173-206 (845)
47 2gk4_A Conserved hypothetical 79.6 1.8 6.2E-05 34.4 4.1 66 87-168 5-82 (232)
48 1u7z_A Coenzyme A biosynthesis 73.4 4 0.00014 32.2 4.5 69 83-167 6-84 (226)
49 1yd7_A 2-keto acid:ferredoxin 73.3 1.6 5.6E-05 37.0 2.3 47 124-176 76-122 (395)
50 1p9o_A Phosphopantothenoylcyst 65.7 3.7 0.00013 34.0 2.8 56 84-154 35-92 (313)
51 2keg_A PLNK; protein, peptide, 63.0 3.1 0.00011 22.1 1.2 14 119-132 6-19 (32)
52 3hyn_A Putative signal transdu 47.9 11 0.00037 29.0 2.6 36 140-175 79-117 (189)
53 2c42_A Pyruvate-ferredoxin oxi 40.9 38 0.0013 33.1 5.7 47 124-176 66-112 (1231)
54 2o1s_A 1-deoxy-D-xylulose-5-ph 39.1 32 0.0011 30.7 4.6 61 107-175 358-419 (621)
55 2w0y_A APH, alkaline phosphata 37.9 23 0.00077 31.1 3.3 22 140-164 46-67 (473)
56 3mos_A Transketolase, TK; thia 37.4 1.3E+02 0.0045 26.8 8.4 61 107-174 352-412 (616)
57 3u0v_A Lysophospholipase-like 36.3 54 0.0019 23.7 4.9 37 140-176 168-209 (239)
58 4hwg_A UDP-N-acetylglucosamine 35.8 1.8E+02 0.0062 23.9 9.5 93 72-173 25-123 (385)
59 1ik6_A Pyruvate dehydrogenase; 35.4 50 0.0017 27.5 5.0 59 109-175 97-165 (369)
60 2o1x_A 1-deoxy-D-xylulose-5-ph 34.0 34 0.0012 30.6 3.9 61 107-175 361-422 (629)
61 2f9y_B Acetyl-coenzyme A carbo 33.3 78 0.0027 25.7 5.7 36 141-176 153-200 (304)
62 4fhz_A Phospholipase/carboxyle 31.5 60 0.002 25.6 4.7 14 121-134 162-175 (285)
63 2ozl_B PDHE1-B, pyruvate dehyd 27.4 47 0.0016 27.3 3.5 59 109-175 61-129 (341)
64 1ozh_A ALS, acetolactate synth 25.5 3.2E+02 0.011 23.5 8.8 44 127-175 63-107 (566)
65 3fgn_A Dethiobiotin synthetase 25.4 2.4E+02 0.0082 21.9 8.2 26 69-94 110-135 (251)
66 1ybh_A Acetolactate synthase, 25.2 3.1E+02 0.011 23.8 8.6 93 73-175 16-109 (590)
67 1umd_B E1-beta, 2-OXO acid deh 25.2 53 0.0018 26.6 3.3 58 109-174 50-117 (324)
68 1w85_B Pyruvate dehydrogenase 25.1 41 0.0014 27.2 2.7 58 109-174 49-116 (324)
69 4feg_A Pyruvate oxidase; carba 24.7 3.1E+02 0.01 23.9 8.5 92 75-175 17-109 (603)
70 1imj_A CIB, CCG1-interacting f 24.4 1.1E+02 0.0038 21.3 4.8 13 141-153 151-163 (210)
71 2e6k_A Transketolase; structur 23.2 1.7E+02 0.0059 26.1 6.6 47 124-175 409-455 (651)
72 3of5_A Dethiobiotin synthetase 23.2 2.4E+02 0.0084 21.3 8.0 28 67-94 91-119 (228)
73 3tg0_A Apase, alkaline phospha 23.1 58 0.002 28.2 3.3 32 127-164 31-62 (449)
74 3ju7_A Putative PLP-dependent 22.4 2.4E+02 0.0081 22.7 6.9 94 72-177 38-137 (377)
75 1itz_A Transketolase; calvin c 22.1 1.1E+02 0.0037 27.7 5.0 46 125-175 427-473 (675)
76 2r8o_A Transketolase 1, TK 1; 21.7 2E+02 0.007 25.8 6.8 62 107-175 399-460 (669)
77 1qs0_B 2-oxoisovalerate dehydr 21.6 47 0.0016 27.0 2.4 59 109-175 51-119 (338)
78 3l0z_A Putative nicotinate-nuc 21.4 50 0.0017 27.7 2.5 32 122-158 214-245 (350)
79 1r9j_A Transketolase; domains, 21.2 1.7E+02 0.0059 26.3 6.2 45 125-174 415-459 (673)
80 2nxw_A Phenyl-3-pyruvate decar 21.2 4E+02 0.014 22.9 9.6 35 141-175 83-118 (565)
81 2yfq_A Padgh, NAD-GDH, NAD-spe 21.0 3.8E+02 0.013 22.7 8.6 97 73-171 126-239 (421)
82 2y8u_A Chitin deacetylase; hyd 20.9 1E+02 0.0036 23.5 4.2 36 140-175 31-66 (230)
83 2g5g_X Putative lipoprotein; c 20.4 1.2E+02 0.0042 24.1 4.5 37 139-175 210-248 (268)
84 2pgn_A Cyclohexane-1,2-dione h 20.1 4.3E+02 0.015 22.9 8.4 92 74-175 9-102 (589)
No 1
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.91 E-value=3.5e-24 Score=192.24 Aligned_cols=151 Identities=17% Similarity=0.210 Sum_probs=112.9
Q ss_pred ceeCCcchHHHHHh-cc-ccccccccCCCCcccchhhhhhccCCCCCCCHHHHHHHhhhhCCCCceEEccCcchhHHHHH
Q psy15960 25 GARRRIRMRDLIQR-AK-VEEGEMKVGGNMRGVDSAVEKMIQDESVPLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRS 102 (177)
Q Consensus 25 ~~~~~v~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~~iiv~dg~~~~~~~~~ 102 (177)
..+.++.++++|++ ++ +......+.. .+.+...........+.++++.++++.|++.+++++++++|.|+..+. ..
T Consensus 319 ~~~~~~~~~~~l~~L~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~-~~ 396 (563)
T 2vk8_A 319 ATFPGVQMKFVLQKLLTTIADAAKGYKP-VAVPARTPANAAVPASTPLKQEWMWNQLGNFLQEGDVVIAETGTSAFG-IN 396 (563)
T ss_dssp EEEETCCHHHHHHHHHHHHHHHTTTCCC-CCCCCCCCCCCCCCTTCBCCHHHHHHHHTTTCCTTCEEEECTTHHHHH-GG
T ss_pred cccCCcCHHHHHHHHHHhhccccchhhh-hhhhhhcccccCCCCCCCcCHHHHHHHHHHhCCCCCEEEECCchHHHH-Hh
Confidence 35567888999988 54 3321111110 111111101111113457999999999999999999999995555443 34
Q ss_pred hhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 103 LLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 103 ~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
++..+.+.+++.++++|+||+++|+|+|+++|.++...+++||+++|||||+|++|||+|++++++|+++||+||
T Consensus 397 ~~~~~~~~~~~~~~~~g~mG~~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~~~~el~ta~~~~l~~~ivv~nN 471 (563)
T 2vk8_A 397 QTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNN 471 (563)
T ss_dssp GSCCCSSCEEECCTTTCCTTHHHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHHHGGGHHHHHHTTCCCEEEEEES
T ss_pred hcCcCCCCeEEcccchhhhhhHHHHHHHHHHhCcccCCCCCEEEEEcchHhhccHHHHHHHHHcCCCcEEEEEEC
Confidence 466777888999999999999999999999996444445999999999999999999999999999999999999
No 2
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.90 E-value=4.2e-24 Score=191.48 Aligned_cols=106 Identities=25% Similarity=0.323 Sum_probs=97.5
Q ss_pred CCCCCHHHHHHHhhhhCCCCceEEcc-CcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEE
Q psy15960 67 SVPLNYYAAIHAVQVSIPDNCIIVGE-GANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVV 145 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l~~~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv 145 (177)
+.++++..+++.|++.+++++++++| |.+.+|..+ ++....|++++.+.++|+||+++|+|+|+++| .|+++||
T Consensus 354 ~~~~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~-~~~~~~~~~~~~~~~~g~mG~~l~~AiGaala----~~~~~vv 428 (549)
T 3eya_A 354 EKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAAR-YLKMNGKRRLLGSFNHGSMANAMPQALGAQAT----EPERQVV 428 (549)
T ss_dssp SSCBCHHHHHHHHHHHSCTTCEEEECTTHHHHHHHH-HCCCCSSCEEECCTTTCCTTCHHHHHHHHHHH----STTSCEE
T ss_pred CCCcCHHHHHHHHHhhCCCCCEEEEcCcHHHHHHHH-hCccCCCCcEEeCCCCchhhhHHHHHHHHHHh----CCCCcEE
Confidence 56899999999999999999999999 655555554 46778899999999999999999999999999 6899999
Q ss_pred EEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 146 CVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 146 ~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+++|||||+|++|||+|++++++|+++||+||
T Consensus 429 ~i~GDGs~~~~~~~L~ta~~~~l~~~ivv~nN 460 (549)
T 3eya_A 429 AMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNN 460 (549)
T ss_dssp EEEEHHHHHHTGGGHHHHHHTTCCCEEEEEEC
T ss_pred EEEccchhhccHHHHHHHHHhCCCeEEEEEeC
Confidence 99999999999999999999999999999999
No 3
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.90 E-value=6.3e-24 Score=190.08 Aligned_cols=145 Identities=20% Similarity=0.191 Sum_probs=109.1
Q ss_pred ceeCCcchHHHHHh-ccccccccccCCCCcccchhhhhhccCCCCCCCHHHHHHHhhhhCCCCceEEccCcchhHHHHHh
Q psy15960 25 GARRRIRMRDLIQR-AKVEEGEMKVGGNMRGVDSAVEKMIQDESVPLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSL 103 (177)
Q Consensus 25 ~~~~~v~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~~iiv~dg~~~~~~~~~~ 103 (177)
..+.++.++++|++ +++......+.. .+.............++++..+++.|++.+++++++++|.|+..+ +.++
T Consensus 317 ~~~~~~~~~~~l~~L~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ivv~d~G~~~~-~~~~ 392 (552)
T 1ovm_A 317 VWFTGIPMNQAIETLVELCKQHVHAGL---MSSSSGAIPFPQPDGSLTQENFWRTLQTFIRPGDIILADQGTSAF-GAID 392 (552)
T ss_dssp EEEESCCHHHHHHHHHHHHHTSCCC-----------------CCSBCCHHHHHHHHHHHCCTTCEEEECTTHHHH-HHTT
T ss_pred cccCCccHHHHHHHHHhCcccccchhh---hhhhccccccCCCCCccCHHHHHHHHHHhcCCCCEEEECCchHHH-HHHh
Confidence 44567888999988 542211111100 111111111112345799999999999999999999999555544 3445
Q ss_pred hhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 104 LLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 104 ~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+..+.|.+++.++++|+||+++|+|+|+++| .|+++||+++|||||+|++|||+|++++++|+++||+||
T Consensus 393 ~~~~~~~~~~~~~~~g~mG~~l~~A~G~a~a----~~~~~vv~~~GDG~~~~~~~el~ta~~~~l~~~ivv~nN 462 (552)
T 1ovm_A 393 LRLPADVNFIVQPLWGSIGYTLAAAFGAQTA----CPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNN 462 (552)
T ss_dssp CCCCSSCEEECCTTTCCTTHHHHHHHHHHHH----CTTSCEEEEEEHHHHHHHTTHHHHHHHTTCCCEEEEEES
T ss_pred cccCCCCeEEechhhHhhhhHHHHHHHHHHh----CCCCcEEEEECchHHHhHHHHHHHHHHhCCCCEEEEEEC
Confidence 6677788899999999999999999999999 689999999999999999999999999999999999998
No 4
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.90 E-value=6.6e-24 Score=190.70 Aligned_cols=151 Identities=17% Similarity=0.243 Sum_probs=114.3
Q ss_pred CcccccCcceeCCcchHHHHHh-cc-ccccccccCCCCcccchhhhhh-ccCCCCCCCHHHHHHHhhhhCCCCceEEccC
Q psy15960 17 GDEEVKRVGARRRIRMRDLIQR-AK-VEEGEMKVGGNMRGVDSAVEKM-IQDESVPLNYYAAIHAVQVSIPDNCIIVGEG 93 (177)
Q Consensus 17 ~~~~~~~~~~~~~v~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~l~~~l~~~~iiv~dg 93 (177)
|..++. .+.+.++.++++|++ ++ ++.....+. .|....... ....+.++++.++++.|++.+++++++++|.
T Consensus 310 d~~~~~-~~~~~~~~~~~~l~~L~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~~iv~~d~ 384 (566)
T 2vbi_A 310 DRVTVD-GRAYDGFTLRAFLQALAEKAPARPASAQ----KSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAET 384 (566)
T ss_dssp SEEEET-TEEEESSCHHHHHHHHHHHCCCCCHHHH----TSCCCCCCCCCCCTTSCCCHHHHHHHHHHHCCTTEEEEECS
T ss_pred ChheeC-CcccCCccHHHHHHHHHHhccccccchh----hhhhhhhccCCCCCCCccCHHHHHHHHHHhcCCCCEEEECC
Confidence 333444 356667889999998 55 432211110 111110000 0123457999999999999999999999995
Q ss_pred cchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEE
Q psy15960 94 ANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILV 173 (177)
Q Consensus 94 ~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviii 173 (177)
|+..+ +..++..+.|.+++.++++|+||+++|+|+|+++| .|+++||+++|||||+|++|||+|++++++|+++|
T Consensus 385 G~~~~-~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~ala----~~~~~vv~~~GDG~~~~~~~eL~ta~~~~l~~~iv 459 (566)
T 2vbi_A 385 GDSWF-NAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMG----SQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIF 459 (566)
T ss_dssp SHHHH-HHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHT----CTTSEEEEEEEHHHHHHHGGGHHHHHHTTCCCEEE
T ss_pred chHHH-hhhheECCCCCEEEecCcccchhhHHHHHHHHHHh----CCCCcEEEEEcchHHHhhHHHHHHHHHhCCCcEEE
Confidence 55544 34446667788899999999999999999999999 68999999999999999999999999999999999
Q ss_pred EEeC
Q psy15960 174 ILYN 177 (177)
Q Consensus 174 VlNN 177 (177)
|+||
T Consensus 460 v~nN 463 (566)
T 2vbi_A 460 LINN 463 (566)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9998
No 5
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.90 E-value=3.7e-24 Score=192.44 Aligned_cols=151 Identities=21% Similarity=0.257 Sum_probs=115.4
Q ss_pred CcccccCcceeCCcchHHHHHh-cc-ccccccccCCCCcccchhh-----hhhccCCCCCCCHHHHHHHhhhhCCCCceE
Q psy15960 17 GDEEVKRVGARRRIRMRDLIQR-AK-VEEGEMKVGGNMRGVDSAV-----EKMIQDESVPLNYYAAIHAVQVSIPDNCII 89 (177)
Q Consensus 17 ~~~~~~~~~~~~~v~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~l~~~l~~~~ii 89 (177)
|..++. .+.+.++.++++|++ ++ ++.....+ ..|.... .......+.++++.++++.|++.+++++++
T Consensus 310 d~~~~~-~~~~~~~~~~~~l~~L~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv 384 (568)
T 2wvg_A 310 RSVVVN-GIRFPSVHLKDYLTRLAQKVSKKTGAL----DFFKSLNAGELKKAAPADPSAPLVNAEIARQVEALLTPNTTV 384 (568)
T ss_dssp SEEEET-TEEEESCCHHHHHHHHHHHCCCCCHHH----HHHHHTTCCSCCCCCCCCTTSBCCHHHHHHHHHTTCCTTEEE
T ss_pred ChhhcC-CeecCCCCHHHHHHHHHHhccccccch----hhhhhhhhhcccccccCCCCCccCHHHHHHHHHHhCCCCCEE
Confidence 444443 356678889999998 55 43211110 0011110 000111245799999999999999999999
Q ss_pred EccCcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCC
Q psy15960 90 VGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLP 169 (177)
Q Consensus 90 v~dg~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lp 169 (177)
++|.|+..+ +..++..+.+.+++.++++|+||+++|+|+|+++| .|+++||+++|||||+|++|||+|++++++|
T Consensus 385 ~~d~G~~~~-~~~~~~~~~~~~~~~~~~~g~~G~~l~~A~G~ala----~~~~~vv~i~GDGs~~~~~~el~ta~~~~l~ 459 (568)
T 2wvg_A 385 IAETGDSWF-NAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVG----APERRNILMVGDGSFQLTAQEVAQMVRLKLP 459 (568)
T ss_dssp EECSSHHHH-HHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHH----CTTSEEEEEEEHHHHHHHGGGHHHHHHTTCC
T ss_pred EEcCcHHHH-HHhhcccCCCCeEEeCCCcchhhhHHHHHHHHHHh----CCCCcEEEEEcChhHhccHHHHHHHHHcCCC
Confidence 999655555 44456777788999999999999999999999999 6899999999999999999999999999999
Q ss_pred cEEEEEeC
Q psy15960 170 VILVILYN 177 (177)
Q Consensus 170 viiiVlNN 177 (177)
++|||+||
T Consensus 460 ~~ivv~NN 467 (568)
T 2wvg_A 460 VIIFLINN 467 (568)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEEC
Confidence 99999998
No 6
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.89 E-value=1.7e-23 Score=188.97 Aligned_cols=107 Identities=27% Similarity=0.342 Sum_probs=96.7
Q ss_pred CCCCCHHHHHHHhhhhCCCCceEEccCcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEE
Q psy15960 67 SVPLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVC 146 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l~~~~iiv~dg~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~ 146 (177)
+.++++..+++.|++.+|+++++++|.|+...++.+++..+.|.+|++++++|+||+++|+|+|+++| .|+++||+
T Consensus 374 ~~~l~~~~~~~~l~~~lp~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~g~~G~~G~~l~~AiGaala----~~~~~vv~ 449 (590)
T 1ybh_A 374 GEAIPPQYAIKVLDELTDGKAIISTGVGQHQMWAAQFYNYKKPRQWLSSGGLGAMGFGLPAAIGASVA----NPDAIVVD 449 (590)
T ss_dssp TTBCCHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHSCCCSSTTSEECCCSSCCTTCHHHHHHHHHHH----CTTSCEEE
T ss_pred cCCcCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhcccCCCCeEEeCCCcccccchHHHHHHHHHh----CCCCcEEE
Confidence 35699999999999999999999999554433444457888899999999999999999999999999 68999999
Q ss_pred EEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 147 VQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 147 i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
++|||||+|++|||+|++++++|+++||+||
T Consensus 450 i~GDGs~~~~~~~L~ta~~~~l~~~ivv~NN 480 (590)
T 1ybh_A 450 IDGDGSFIMNVQELATIRVENLPVKVLLLNN 480 (590)
T ss_dssp EEEHHHHHHTTTHHHHHHHTTCCEEEEEEEC
T ss_pred EEccchhhccHHHHHHHHHhCCCcEEEEEEC
Confidence 9999999999999999999999999999999
No 7
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.89 E-value=1.3e-23 Score=188.63 Aligned_cols=107 Identities=50% Similarity=0.902 Sum_probs=99.1
Q ss_pred CCCCCCHHHHHHHhhhhC--CCCceEEccCcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCe
Q psy15960 66 ESVPLNYYAAIHAVQVSI--PDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKR 143 (177)
Q Consensus 66 ~~~~l~~~~~~~~l~~~l--~~~~iiv~dg~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~ 143 (177)
.+.++++.++++.|++.+ |++.++++||++.+++.+.++....|++++.++++|+||+++|+|+|+++| |+++
T Consensus 366 ~~~~~~~~~~~~~l~~~l~~~~d~ivv~dg~~~~~~~~~~~~~~~p~~~~~~g~~g~~G~~l~~AiGaa~a-----~~~~ 440 (564)
T 2q28_A 366 DTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVT-----SGSP 440 (564)
T ss_dssp CCSSBCHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHSCCCSSSCEEESTTTTCTTCHHHHHHHHHHH-----HCSC
T ss_pred CCCCcCHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHHHhcccCCCeEecCCCCCcccchHHHHHHHhhc-----CCCc
Confidence 356799999999999999 888888889888888777667778899999999999999999999999998 7899
Q ss_pred EEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 144 VVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 144 vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
||+++|||||+|++|||.|++++++|++|||+||
T Consensus 441 vv~i~GDGsf~~~~~el~ta~~~~l~~~ivv~NN 474 (564)
T 2q28_A 441 VVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNN 474 (564)
T ss_dssp EEEEEEHHHHHTTGGGHHHHHHTTCCEEEEEEEC
T ss_pred EEEEEcchHhhccHHHHHHHHHhCCCeEEEEEeC
Confidence 9999999999999999999999999999999999
No 8
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.89 E-value=1.3e-23 Score=188.89 Aligned_cols=106 Identities=48% Similarity=0.792 Sum_probs=98.6
Q ss_pred CCCCCHHHHHHHhhhhC--CCCceEEccCcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeE
Q psy15960 67 SVPLNYYAAIHAVQVSI--PDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRV 144 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l--~~~~iiv~dg~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~v 144 (177)
..++++..+++.|++.+ |++++++.||++.+++.+.++....|++++.++++|+||+++|+|+|+++| |+++|
T Consensus 372 ~~~~~~~~~~~~l~~~l~~~~~~iv~~dg~~~~~~~~~~~~~~~p~~~~~~g~~g~~G~~l~~AiGaala-----~~~~v 446 (568)
T 2c31_A 372 SGMMNYSNSLGVVRDFMLANPDISLVNEGANALDNTRMIVDMLKPRKRLDSGTWGVMGIGMGYCVAAAAV-----TGKPV 446 (568)
T ss_dssp TTCBCHHHHHHHHHHHHHHCCSSEEEEESSHHHHHHHHHCCCCSTTCEEESTTTTCSSCHHHHHHHHHHH-----HCSCE
T ss_pred CCCcCHHHHHHHHHHHhcCCCCeEEEECChhHHHHHHHHhcccCCCeEEcCCCCccccccHHHHHHHHhC-----CCCcE
Confidence 46799999999999999 989899999888888777666778899999999999999999999999998 78999
Q ss_pred EEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 145 VCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 145 v~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
|+++|||||+|++|||+|++++++|++|||+||
T Consensus 447 v~i~GDGsf~~~~~el~ta~~~~l~~~ivv~NN 479 (568)
T 2c31_A 447 IAVEGDSAFGFSGMELETICRYNLPVTVIIMNN 479 (568)
T ss_dssp EEEEEHHHHHTTGGGHHHHHHTTCCEEEEEEES
T ss_pred EEEEcchHhhccHHHHHHHHHhCCCeEEEEEeC
Confidence 999999999999999999999999999999999
No 9
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.89 E-value=3e-23 Score=187.45 Aligned_cols=107 Identities=28% Similarity=0.403 Sum_probs=97.9
Q ss_pred CCCCCCHHHHHHHhhhhCCCCceEEcc-CcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeE
Q psy15960 66 ESVPLNYYAAIHAVQVSIPDNCIIVGE-GANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRV 144 (177)
Q Consensus 66 ~~~~l~~~~~~~~l~~~l~~~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~v 144 (177)
.+.++++..+++.|++.+++++++++| |++.+|..+ ++..+.|.+++.+.++|+||+++|+|+|+++| .|+++|
T Consensus 371 ~~~~l~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~-~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala----~~~~~v 445 (589)
T 2pgn_A 371 DGMPASMFRAMAEVRKVQRPEDIIVTDIGNHTLPMFG-GAILQRPRRLVTSMAEGILGCGFPMALGAQLA----EPNSRV 445 (589)
T ss_dssp CCSSCCHHHHHHHHHHTCCTTCEEEECSSTTHHHHHH-HCCCSSTTCEESCTTTCCTTCHHHHHHHHHHH----CTTSCE
T ss_pred CCCCcCHHHHHHHHHHhCCCCCEEEEcCchHHHHHHH-hcccCCCCcEECCCCcchhhhHHHHHHHHHHh----CCCCcE
Confidence 345799999999999999999999999 555566665 47788899999999999999999999999999 689999
Q ss_pred EEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 145 VCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 145 v~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
|+++|||||+|++|||+|++++++|+++||+||
T Consensus 446 v~i~GDG~~~~~~~~L~ta~~~~l~~~ivv~nN 478 (589)
T 2pgn_A 446 FLGTGDGALYYHFNEFRVAVEHKLPVITMVFTN 478 (589)
T ss_dssp EEEEEHHHHHHHGGGHHHHHHTTCCCEEEEEEC
T ss_pred EEEEeeHHHHhhHHHHHHHHHhCCCeEEEEEEC
Confidence 999999999999999999999999999999999
No 10
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.89 E-value=2.9e-23 Score=186.65 Aligned_cols=149 Identities=19% Similarity=0.187 Sum_probs=114.1
Q ss_pred CcccccCcceeCCcchHHHHHh-cc-ccccccccCCCCcccchhhhhhccCCCCCCCHHHHHHHhhhhCCCCceEEccCc
Q psy15960 17 GDEEVKRVGARRRIRMRDLIQR-AK-VEEGEMKVGGNMRGVDSAVEKMIQDESVPLNYYAAIHAVQVSIPDNCIIVGEGA 94 (177)
Q Consensus 17 ~~~~~~~~~~~~~v~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~~iiv~dg~ 94 (177)
|..++.+ ..+.++.++++|++ ++ +.... +. .+..... . .......++++..+++.|++.+++++++++|+|
T Consensus 329 d~~~~~~-~~~~~~~~~~~l~~L~~~l~~~~--~~--~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~G 401 (570)
T 2vbf_A 329 DEGIIFN-KVVEDFDFRAVVSSLSELKGIEY--EG--QYIDKQY-E-EFIPSSAPLSQDRLWQAVESLTQSNETIVAEQG 401 (570)
T ss_dssp SCEEETT-EEECSSCHHHHHHTGGGCCSCCC--CS--CCCCCCC-C-CCCCCSSBCCHHHHHHHHHHHCCSSEEEEECTT
T ss_pred CHHHhCC-eeecCCCHHHHHHHHHHhccccc--cc--cchhhhc-c-ccCCCCCCcCHHHHHHHHHHhcCCCCEEEEeCC
Confidence 3334443 45667889999998 55 43211 10 0001110 0 111224579999999999999999999999955
Q ss_pred chhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEE
Q psy15960 95 NTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVI 174 (177)
Q Consensus 95 ~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiV 174 (177)
++++ ...++..+.+.+++.++++|+||+++|+|+|+++| .|+++||+++|||||+|++|||+|++++++|+++||
T Consensus 402 ~~~~-~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~Gaala----~~~~~vv~~~GDG~~~~~~~eL~ta~~~~l~~~ivv 476 (570)
T 2vbf_A 402 TSFF-GASTIFLKSNSRFIGQPLWGSIGYTFPAALGSQIA----DKESRHLLFIGDGSLQLTVQELGLSIREKLNPICFI 476 (570)
T ss_dssp HHHH-HHTTSCCCTTCEEECCTTTCCTTTHHHHHHHHHHH----CTTSEEEEEEEHHHHHHHGGGHHHHHHTTCCCEEEE
T ss_pred HHHH-HHHhcccCCCCeEecCccchhhhhhHHHHHHHHHh----CCCCcEEEEEcchhhhcCHHHHHHHHHcCCCCEEEE
Confidence 5544 33445677788999999999999999999999999 689999999999999999999999999999999999
Q ss_pred EeC
Q psy15960 175 LYN 177 (177)
Q Consensus 175 lNN 177 (177)
+||
T Consensus 477 ~nN 479 (570)
T 2vbf_A 477 INN 479 (570)
T ss_dssp EES
T ss_pred EEC
Confidence 998
No 11
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.89 E-value=2.8e-23 Score=187.79 Aligned_cols=106 Identities=27% Similarity=0.356 Sum_probs=96.8
Q ss_pred CCCCCHHHHHHHhhhhCCCCceEEcc-CcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEE
Q psy15960 67 SVPLNYYAAIHAVQVSIPDNCIIVGE-GANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVV 145 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l~~~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv 145 (177)
+.++++.++++.|++.+++++++++| |.+.+|..+ ++..+.|.+++.++++|+||+++|+|+|+++| .|+++||
T Consensus 361 ~~~~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~-~~~~~~~~~~~~~~~~g~mG~~l~~AiGaala----~~~~~vv 435 (590)
T 1v5e_A 361 EGDLQFYQVYNAINNHADEDAIYSIDVGNSTQTSIR-HLHMTPKNMWRTSPLFATMGIAIPGGLGAKNT----YPDRQVW 435 (590)
T ss_dssp SSBCCHHHHHHHHHHHSCTTCEEEECSSHHHHGGGG-TCCCCTTSEEECCCSSCCTTCHHHHHHHHHHH----CTTSCEE
T ss_pred CCCcCHHHHHHHHHhhCCCCCEEEECCchHHHHHHH-hcccCCCCeEEcCCCCCcccChHHHHHHHHHh----CCCCeEE
Confidence 55799999999999999999999999 555555444 57788899999999999999999999999999 6899999
Q ss_pred EEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 146 CVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 146 ~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+++|||||+|++|||+|++++++|+++||+||
T Consensus 436 ~i~GDG~~~~~~~~L~ta~~~~l~~~ivv~NN 467 (590)
T 1v5e_A 436 NIIGDGAFSMTYPDVVTNVRYNMPVINVVFSN 467 (590)
T ss_dssp EEEEHHHHHHHGGGHHHHHHTTCCCEEEEEEC
T ss_pred EEEechHHhchHHHHHHHHHhCCCCEEEEEEC
Confidence 99999999999999999999999999999999
No 12
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.89 E-value=4.2e-23 Score=187.27 Aligned_cols=106 Identities=23% Similarity=0.337 Sum_probs=96.4
Q ss_pred CCCCCHHHHHHHhhhhCCCCceEEccCc-chhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEE
Q psy15960 67 SVPLNYYAAIHAVQVSIPDNCIIVGEGA-NTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVV 145 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l~~~~iiv~dg~-~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv 145 (177)
+.++++..+++.|++.+++++++++|++ +.+|.. .++..+.|++|++++++|+||+++|+|+|+++| .|+++||
T Consensus 390 ~~~~~~~~~~~~L~~~l~~~~ivv~d~G~~~~~~~-~~~~~~~~~~~~~~g~~G~~G~~l~~AiGaala----~~~~~vv 464 (616)
T 2pan_A 390 NVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAA-QMLHVFKDRHWINCGQAGPLGWTIPAALGVCAA----DPKRNVV 464 (616)
T ss_dssp CSSBCHHHHHHHHHHHSCTTEEEEECSSHHHHHHH-HHCCCCSTTSEEECTTTCCTTCHHHHHHHHHHH----CTTCEEE
T ss_pred CCCcCHHHHHHHHHHhCCCCcEEEEcCcHHHHHHH-HhcccCCCCeEEcCCCcccccchHHHHHHHHHh----CCCCcEE
Confidence 4579999999999999999999999944 555554 447778889999999999999999999999999 6899999
Q ss_pred EEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 146 CVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 146 ~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+++|||||+|++|||+|++++++|++|||+||
T Consensus 465 ~i~GDGs~~~~~~~L~ta~~~~l~~~ivv~NN 496 (616)
T 2pan_A 465 AISGDFDFQFLIEELAVGAQFNIPYIHVLVNN 496 (616)
T ss_dssp EEEEHHHHHHTGGGHHHHHHTTCCCEEEEEEC
T ss_pred EEEcchhhhCCHHHHHHHHHhCCCeEEEEEEC
Confidence 99999999999999999999999999999999
No 13
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.89 E-value=3.3e-23 Score=187.73 Aligned_cols=108 Identities=31% Similarity=0.449 Sum_probs=98.5
Q ss_pred CCCCCCCHHHHHHHhhhhCCCCceEEcc-CcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCe
Q psy15960 65 DESVPLNYYAAIHAVQVSIPDNCIIVGE-GANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKR 143 (177)
Q Consensus 65 ~~~~~l~~~~~~~~l~~~l~~~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~ 143 (177)
..+.++++.++++.|++.++++++++.| |++.+|..+ ++..+.+.+++.+.++|+||+++|+|+|+++| .|+++
T Consensus 366 ~~~~~l~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~-~~~~~~~~~~~~~~~~g~~G~~l~~A~Gaala----~~~~~ 440 (603)
T 4feg_A 366 KQEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANR-HLKLTPSNRHITSNLFATMGVGIPGAIAAKLN----YPERQ 440 (603)
T ss_dssp CCSSBCCHHHHHHHHHHHCCTTCEEEECSSHHHHHHHH-HCCCCTTCEEECCCSSCCTTCHHHHHHHHHHH----CTTSC
T ss_pred CCCCCcCHHHHHHHHHHhCCCCCEEEECCchHHHHHHH-hceeCCCCceecCcccccccchhHHHhhHHHh----CCCCc
Confidence 3567899999999999999999999999 555556555 47788899999999999999999999999999 68999
Q ss_pred EEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 144 VVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 144 vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
||+++|||||+|+.|||+|++++++|+++||+||
T Consensus 441 vv~~~GDG~~~~~~~~l~~a~~~~lp~~~vv~nN 474 (603)
T 4feg_A 441 VFNLAGDGGASMTMQDLATQVQYHLPVINVVFTN 474 (603)
T ss_dssp EEEEEEHHHHHHHGGGHHHHHHTTCCCEEEEEEC
T ss_pred EEEEeccHHHhhhHHHHHHHHHHCcCeEEEEEEC
Confidence 9999999999999999999999999999999999
No 14
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.89 E-value=5.6e-23 Score=184.88 Aligned_cols=106 Identities=31% Similarity=0.386 Sum_probs=96.8
Q ss_pred CCC-CCHHHHHHHhhhhCCCCceEEcc-CcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeE
Q psy15960 67 SVP-LNYYAAIHAVQVSIPDNCIIVGE-GANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRV 144 (177)
Q Consensus 67 ~~~-l~~~~~~~~l~~~l~~~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~v 144 (177)
+.+ +++..+++.|++.++++++++.| |.+..|..+ ++....|.+++.++++|+||+++|+|+|+++| .|+++|
T Consensus 367 ~~~~l~~~~v~~~l~~~l~~~~iv~~d~G~~~~~~~~-~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala----~~~~~v 441 (566)
T 1ozh_A 367 NQFALHPLRIVRAMQDIVNSDVTLTVDMGSFHIWIAR-YLYTFRARQVMISNGQQTMGVALPWAIGAWLV----NPERKV 441 (566)
T ss_dssp CCSSBCHHHHHHHHHHHCCTTEEEEECSSHHHHHHHH-TGGGCCCSEEECCCTTCCTTCHHHHHHHHHHH----STTSEE
T ss_pred CCCCcCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHH-hcccCCCCeEEeCCCcccccchHHHHHHHHHh----CCCCCE
Confidence 456 99999999999999999999999 555555554 47778899999999999999999999999999 689999
Q ss_pred EEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 145 VCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 145 v~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
|+++|||||+|++|||+|++++++|+++||+||
T Consensus 442 v~i~GDG~~~~~~~~L~ta~~~~l~~~ivv~nN 474 (566)
T 1ozh_A 442 VSVSGDGGFLQSSMELETAVRLKANVLHLIWVD 474 (566)
T ss_dssp EEEEEHHHHHHHTTHHHHHHHHTCCEEEEEEEC
T ss_pred EEEEcChHHhccHHHHHHHHHhCCCcEEEEEEC
Confidence 999999999999999999999999999999999
No 15
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.88 E-value=6.2e-23 Score=184.73 Aligned_cols=106 Identities=21% Similarity=0.316 Sum_probs=96.7
Q ss_pred CCCCCHHHHHHHhhhhCCC-----CceEEcc-CcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCC
Q psy15960 67 SVPLNYYAAIHAVQVSIPD-----NCIIVGE-GANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAP 140 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l~~-----~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p 140 (177)
+.++++.++++.|++.+++ ++++++| |.+..|..+ ++..+.|.+++.++++|+||+++|+|+|+++| .|
T Consensus 379 ~~~~~~~~~~~~l~~~l~~~~~~~~~iv~~d~G~~~~~~~~-~~~~~~~~~~~~~~g~g~mG~~l~~AiGaa~a----~~ 453 (573)
T 2iht_A 379 EDGMRVHQVIDSMNTVMEEAAEPGEGTIVSDIGFFRHYGVL-FARADQPFGFLTSAGCSSFGYGIPAAIGAQMA----RP 453 (573)
T ss_dssp SSSBCHHHHHHHHHHHHHHHSCTTCCEEEECSSHHHHHHHH-HCCCCSTTSEECCSSSCCTTCHHHHHHHHHHH----ST
T ss_pred cCCcCHHHHHHHHHHhcccccCCCCcEEEEcCcHhHHHHHH-hcCcCCCCeEEcCCCCcccccHHHHHHHHHHh----CC
Confidence 4579999999999999999 9999999 555555554 47778889999999999999999999999999 68
Q ss_pred CCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 141 GKRVVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 141 ~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+++||+++|||||+|++|||+|++++++|+++||+||
T Consensus 454 ~~~vv~i~GDG~~~~~~~~L~~a~~~~l~~~ivv~NN 490 (573)
T 2iht_A 454 DQPTFLIAGDGGFHSNSSDLETIARLNLPIVTVVVNN 490 (573)
T ss_dssp TSCEEEEEEHHHHHHTGGGHHHHHHHTCCCEEEEEEC
T ss_pred CCcEEEEEccHHHHhHHHHHHHHHHhCCCeEEEEEEC
Confidence 9999999999999999999999999999999999999
No 16
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.88 E-value=9.1e-23 Score=181.80 Aligned_cols=105 Identities=26% Similarity=0.361 Sum_probs=95.3
Q ss_pred CCCCCHHHHHHHhhhhCCCCceEEcc-CcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEE
Q psy15960 67 SVPLNYYAAIHAVQVSIPDNCIIVGE-GANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVV 145 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l~~~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv 145 (177)
..++++.++++.|++.+|+++++++| |++..|..+ ++....+.+++.+.+ |+||+++|+|+|+++| .|+++||
T Consensus 350 ~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~-~~~~~~~~~~~~~~g-g~~G~~l~~A~G~a~a----~~~~~vv 423 (528)
T 1q6z_A 350 AGRLHPETVFDTLNDMAPENAIYLNESTSTTAQMWQ-RLNMRNPGSYYFCAA-GGLGFALPAAIGVQLA----EPERQVI 423 (528)
T ss_dssp SSSBCHHHHHHHHHHHSCTTCEEEEECTTSHHHHHH-HCCCCSSSCEEECTT-CCTTSHHHHHHHHHHH----CTTSCEE
T ss_pred CCCcCHHHHHHHHHhhCCCCeEEEECCcccHHHHHH-hccccCCCcEECCCC-ccccchHHHHHHHHHh----CCCCcEE
Confidence 45799999999999999999999999 555655544 467777889998888 9999999999999999 6889999
Q ss_pred EEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 146 CVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 146 ~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+++|||||+|+.|||+|++++++|+++||+||
T Consensus 424 ~~~GDG~~~~~~~~l~~a~~~~l~~~ivv~nN 455 (528)
T 1q6z_A 424 AVIGDGSANYSISALWTAAQYNIPTIFVIMNN 455 (528)
T ss_dssp EEEEHHHHTTTGGGHHHHHHHTCCCEEEEEEC
T ss_pred EEECCcHHHhhHHHHHHHHHhCCCeEEEEEeC
Confidence 99999999999999999999999999999999
No 17
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.88 E-value=6.8e-23 Score=184.01 Aligned_cols=106 Identities=32% Similarity=0.515 Sum_probs=96.0
Q ss_pred CCCHHHHHHHhhhhCCCCceEEccCcc-hhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEE
Q psy15960 69 PLNYYAAIHAVQVSIPDNCIIVGEGAN-TMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCV 147 (177)
Q Consensus 69 ~l~~~~~~~~l~~~l~~~~iiv~dg~~-~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i 147 (177)
++++..+++.|++.++++++++.|+|+ .+|..+ ++....|.+++.++++|+||+++|+|+|+++|.+ .|+++||++
T Consensus 369 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~-~~~~~~~~~~~~~~g~g~~G~~l~~AiGaa~a~~--~~~~~vv~i 445 (563)
T 2uz1_A 369 ALHPFHASQVIAKHVDAGVTVVADGALTYLWLSE-VMSRVKPGGFLCHGYLGSMGVGFGTALGAQVADL--EAGRRTILV 445 (563)
T ss_dssp SCCHHHHHHHHHTTCSTTEEEEECSSHHHHHHHH-HHTTSCCSEEECCCTTCCTTTHHHHHHHHHHHHH--HHTCEEEEE
T ss_pred CcCHHHHHHHHHHhCCCCcEEEEcCchHHHHHHH-hccccCCCeEECCCCCccccChHHHHHHHHHHhh--CCCCeEEEE
Confidence 799999999999999999999999554 555544 5788889999999999999999999999999932 278999999
Q ss_pred EcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 148 QGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 148 ~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+|||||+|++|||+|++++++|+++||+||
T Consensus 446 ~GDG~~~~~~~~L~ta~~~~l~~~ivv~nN 475 (563)
T 2uz1_A 446 TGDGSVGYSIGEFDTLVRKQLPLIVIIMNN 475 (563)
T ss_dssp EEHHHHGGGTTHHHHHHHHTCCCEEEEEEC
T ss_pred EccHHHhCCHHHHHHHHHhCCCeEEEEEeC
Confidence 999999999999999999999999999998
No 18
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.88 E-value=7.9e-23 Score=183.87 Aligned_cols=142 Identities=18% Similarity=0.304 Sum_probs=108.3
Q ss_pred ceeCCcchHHHHHh-cc-ccccccccCCCCcccchhhhhhccCCCCCCCHHHHHHHhhhhCCC--CceE-EccCcchhHH
Q psy15960 25 GARRRIRMRDLIQR-AK-VEEGEMKVGGNMRGVDSAVEKMIQDESVPLNYYAAIHAVQVSIPD--NCII-VGEGANTMDI 99 (177)
Q Consensus 25 ~~~~~v~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~l~~--~~ii-v~dg~~~~~~ 99 (177)
..+.++.+.++|++ ++ ++.....+... ..+ .. .........++++..+++.|++.+|+ ++++ ++|.|+++++
T Consensus 330 ~~~~~~~~~~~l~~L~~~l~~~~~~w~~~-~~~-~~-~~~~~~~~~~l~~~~v~~~l~~~l~~~~~~iv~~~d~G~~~~~ 406 (565)
T 2nxw_A 330 HTYADIPLAGLVDALLERLPPSDRTTRGK-EPH-AY-PTGLQADGEPIAPMDIARAVNDRVRAGQEPLLIAADMGDCLFT 406 (565)
T ss_dssp EEEESCCHHHHHHHHHHTSCCCCCCCCCS-CSS-CC-CCCCCCSSSBCCHHHHHHHHHHHHHTTCCCCEEEECSSHHHHH
T ss_pred cccCCccHHHHHHHHHHhccccchhhhhh-hhh-hc-cccccCCCCccCHHHHHHHHHHhcccccCCEEEEecchHHHHH
Confidence 45667888999988 54 43321111110 000 00 00011134579999999999999999 9998 8996655554
Q ss_pred HHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 100 GRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 100 ~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
... + .|.+++.++++|+||+++|+|+|+++| .|+++||+++|||||+|++|||+|++++++|++|||+||
T Consensus 407 ~~~---~-~~~~~~~~~~~g~mG~~l~~A~G~ala----~~~~~vv~i~GDG~~~~~~~~l~ta~~~~l~~~ivv~nN 476 (565)
T 2nxw_A 407 AMD---M-IDAGLMAPGYYAGMGFGVPAGIGAQCV----SGGKRILTVVGDGAFQMTGWELGNCRRLGIDPIVILFNN 476 (565)
T ss_dssp HTT---S-CCSCEECCTTTCCTTCHHHHHHHHHHH----TTTCCEEEEEEHHHHHHHGGGGGGHHHHTCCCEEEEEEC
T ss_pred HHh---C-CCcEEEccCccccccccchHHHHHHHh----CCCCcEEEEEechHHHhhHHHHHHHHHhCCCCEEEEEEC
Confidence 432 2 788899999999999999999999999 689999999999999999999999999999999999999
No 19
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.87 E-value=1.4e-22 Score=186.26 Aligned_cols=106 Identities=25% Similarity=0.364 Sum_probs=94.0
Q ss_pred CCCCCHHHHHHHhhhhC---CCCceEEcc-CcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCC
Q psy15960 67 SVPLNYYAAIHAVQVSI---PDNCIIVGE-GANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGK 142 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l---~~~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r 142 (177)
..++++..+++.|++.+ +++.|+++| |.+.+|..+ ++..+.|+++++++++|+||+++|+|+|+++| .|++
T Consensus 458 ~~~l~~~~v~~~L~~~l~~~~~~~iv~~~vg~~~~~~~~-~~~~~~p~~~~~sg~~G~mG~~lpaAiGaalA----~p~~ 532 (677)
T 1t9b_A 458 GSKIKPQTVIKKLSKVANDTGRHVIVTTGVGQHQMWAAQ-HWTWRNPHTFITSGGLGTMGYGLPAAIGAQVA----KPES 532 (677)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSCEEEEECSSHHHHHHHH-HSCCCSTTCEECCCSSCCTTCHHHHHHHHHHH----CTTS
T ss_pred CCCcCHHHHHHHHHHHhhcCCCCEEEEeCCchHHHHHHH-hcccCCCCeEEeCCCcchhhchHHHHHHHHHh----CCCC
Confidence 45799999999999999 566677778 444455544 47788899999999999999999999999999 6999
Q ss_pred eEEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 143 RVVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 143 ~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+||+++|||||+|++|||+|++++++|++|||+||
T Consensus 533 ~Vv~i~GDGsf~~~~~eL~ta~~~~l~v~ivV~NN 567 (677)
T 1t9b_A 533 LVIDIDGDASFNMTLTELSSAVQAGTPVKILILNN 567 (677)
T ss_dssp EEEEEEEHHHHHHHGGGHHHHHHHTCCCEEEEEEC
T ss_pred eEEEEEeehHHhccHHHHHHHHHhCCCeEEEEEeC
Confidence 99999999999999999999999999999999999
No 20
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.86 E-value=7.7e-22 Score=178.68 Aligned_cols=105 Identities=13% Similarity=0.075 Sum_probs=92.9
Q ss_pred CCCCCHHHHHHHhhhhCCCCceEEcc-CcchhHHHHHhhhccC-CCceecCCCcccccchHHHHHHHHHHhhhcCCCCeE
Q psy15960 67 SVPLNYYAAIHAVQVSIPDNCIIVGE-GANTMDIGRSLLLNNL-PRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRV 144 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~~l~~~~iiv~d-g~~~~~~~~~~~~~~~-p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~v 144 (177)
..++++.++++.|++.+|++++|++| |.+..++.+ ++.... |.+++.+.++++||+++|+|+|+++| ++++|
T Consensus 402 ~~~~~~~~~~~~L~~~lp~d~iv~~d~g~~~~~~~~-~~~~~~~~~~~~~~~G~~~ig~~l~~AiGaala-----~~~~v 475 (604)
T 2x7j_A 402 EDVSFEGNLYRILQHLVPENSSLFVGNSMPIRDVDT-FFEKQDRPFRIYSNRGANGIDGVVSSAMGVCEG-----TKAPV 475 (604)
T ss_dssp CCTTSHHHHHHHHHHHSCTTCEEEECTTHHHHHHHH-HCCCBSCCCEEECCTTTCCSSSHHHHHHHHHHH-----HTSCE
T ss_pred cCCCCHHHHHHHHHHhCCCCCEEEEECCHHHHHHHH-hcccCCCCceEEeCCCcCCcCcHHHHHHHHHhc-----CCCcE
Confidence 45799999999999999999999999 555555543 344443 78899999999999999999999998 57899
Q ss_pred EEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 145 VCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 145 v~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
|+++|||||+|++|||+|++++++|++|||+||
T Consensus 476 v~i~GDGsf~~~~~eL~ta~~~~lp~~ivv~NN 508 (604)
T 2x7j_A 476 TLVIGDLSFYHDLNGLLAAKKLGIPLTVILVNN 508 (604)
T ss_dssp EEEEEHHHHHHTGGGGHHHHHHCCCEEEEEEEC
T ss_pred EEEEccHHHHhHHHHHHHhhhcCCCeEEEEEeC
Confidence 999999999999999999999999999999998
No 21
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.83 E-value=9e-21 Score=170.18 Aligned_cols=105 Identities=17% Similarity=0.160 Sum_probs=83.4
Q ss_pred CCCCCCHHHHHHHhhhhCCCCceEEccCcch-hHHHHHhhhccCCCceecC-CCcccccchHHHHHHHHHHhhhcCCCCe
Q psy15960 66 ESVPLNYYAAIHAVQVSIPDNCIIVGEGANT-MDIGRSLLLNNLPRHRLDA-GTFGTMGVGLGFALAAALYCNHYAPGKR 143 (177)
Q Consensus 66 ~~~~l~~~~~~~~l~~~l~~~~iiv~dg~~~-~~~~~~~~~~~~p~~~i~~-~~~gsmG~~lpaAiGaala~~~~~p~r~ 143 (177)
.+.++++.++++.|++.+|++++|+.+.+.. .++.. +...+...+++.+ +..|.||+ +|+|+|+++| |+++
T Consensus 363 ~~~~~~~~~~~~~l~~~l~~~~iv~~g~~~~~~~~~~-~~~~~~~~~~~~~~g~~g~~G~-l~~A~Gaa~a-----~~~~ 435 (556)
T 3hww_A 363 RRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDA-LSQLPAGYPVYSNRGASGIDGL-LSTAAGVQRA-----SGKP 435 (556)
T ss_dssp TCCSSSHHHHHHTGGGTCCTTCEEEECSSHHHHHHHH-HCCCCTTCCEEECCSSCCSSSH-HHHHHHHHHH-----HCCC
T ss_pred cccCcCHHHHHHHHHHhCCCCCeEEEeCCcHHHHHHH-hccCCCCceEEecCcccccccH-HHHHHHHHhc-----CCCc
Confidence 4568999999999999999999998763322 11111 1112223345554 55677788 9999999998 6899
Q ss_pred EEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 144 VVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 144 vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
||+++|||||+|++|||+|++++++|+++||+||
T Consensus 436 vv~i~GDGsf~~~~~eL~ta~~~~lpv~ivv~NN 469 (556)
T 3hww_A 436 TLAIVGDLSALYDLNALALLRQVSAPLVLIVVNN 469 (556)
T ss_dssp EEEEEEHHHHHHTGGGHHHHTTCSSCEEEEEEES
T ss_pred EEEEEccHHhhhcchhhHhhcccCCCcEEEEEEC
Confidence 9999999999999999999999999999999999
No 22
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.82 E-value=7.5e-21 Score=171.42 Aligned_cols=105 Identities=15% Similarity=0.136 Sum_probs=84.0
Q ss_pred CCCCCCHHHHHHHhhhhCCCCceEEccCc-chhHHHHHhhh-ccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCe
Q psy15960 66 ESVPLNYYAAIHAVQVSIPDNCIIVGEGA-NTMDIGRSLLL-NNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKR 143 (177)
Q Consensus 66 ~~~~l~~~~~~~~l~~~l~~~~iiv~dg~-~~~~~~~~~~~-~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~ 143 (177)
++.++++.++++.|++.+|++++++.|.+ ...+..+ ++. ...+.+++.+.++++||+++|+|+|+++ |+|+
T Consensus 382 ~~~~~~~~~~~~~l~~~l~~~~iv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~G~~g~l~~AiGaa~------~~~~ 454 (578)
T 3lq1_A 382 NTTILEEGKIVAELRRLLPDKAGLFIGNSMPIRDVDT-YFSQIDKKIKMLANRGANGIDGVVSSALGASV------VFQP 454 (578)
T ss_dssp C----CTTHHHHHHHHHSCSEEEEEECSSHHHHHHHH-HCCCCSSEEEEECCCSSCCSSSHHHHHHHHTT------TSSS
T ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEeCccHHHHHHH-hhcccCCCceEEeCCCccccccHHHHHHHHhc------CCCC
Confidence 45679999999999999999999998844 3334433 232 3455567777766777779999999953 6899
Q ss_pred EEEEEcchhhcccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 144 VVCVQGDSAFGFSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 144 vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
||+++|||||+|++|||+|++++++|+++||+||
T Consensus 455 vv~i~GDGsf~~~~~eL~ta~~~~l~~~ivv~NN 488 (578)
T 3lq1_A 455 MFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNN 488 (578)
T ss_dssp EEEEEEHHHHHHTGGGGHHHHHTTCCEEEEEECC
T ss_pred EEEEEchHHHHhhHHHHHhhccCCCCeEEEEEEC
Confidence 9999999999999999999999999999999999
No 23
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.57 E-value=2e-15 Score=146.26 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=84.8
Q ss_pred HHHHHHHhhhhCCCCceEEcc-CcchhHHHHHh---hhccCCC---ceecCC--CcccccchHHH---------------
Q psy15960 72 YYAAIHAVQVSIPDNCIIVGE-GANTMDIGRSL---LLNNLPR---HRLDAG--TFGTMGVGLGF--------------- 127 (177)
Q Consensus 72 ~~~~~~~l~~~l~~~~iiv~d-g~~~~~~~~~~---~~~~~p~---~~i~~~--~~gsmG~~lpa--------------- 127 (177)
+..+++.|.+.++++.+|++| |++++|.+++. +....++ .++++. ..++||||+|+
T Consensus 816 e~~~ik~l~ql~g~~~iian~tGc~siw~~~~~~~~~~~~~~g~~p~~~~Slf~~~a~mG~G~~~~~~~~~~~~~~~~~~ 895 (1231)
T 2c42_A 816 ETPYVRVITQLFGERMFIANATGCSSIWGASAPSMPYKTNRLGQGPAWGNSLFEDAAEYGFGMNMSMFARRTHLADLAAK 895 (1231)
T ss_dssp SHHHHHHHHHHHGGGEEEEECSSHHHHHHHBTTCCCBCCCTTSCCCEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCeEEEecCchHHHHHhhcccCCcccccCCCCcceecccCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999999 78888776642 1222223 566663 66999999999
Q ss_pred ------------HH--------------------HHHHHhhh------------cCCCCeEEEEEcch-hhcccHHHHHH
Q psy15960 128 ------------AL--------------------AAALYCNH------------YAPGKRVVCVQGDS-AFGFSGMELET 162 (177)
Q Consensus 128 ------------Ai--------------------Gaala~~~------------~~p~r~vv~i~GDG-sf~m~~qEL~T 162 (177)
|+ |++++... ..++++||++.||| +|+|++|||.|
T Consensus 896 ~~~~~~~~~~~~Ai~~w~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~Vv~i~GDG~~~~mg~~eL~t 975 (1231)
T 2c42_A 896 ALESDASGDVKEALQGWLAGKNDPIKSKEYGDKLKKLLAGQKDGLLGQIAAMSDLYTKKSVWIFGGDGWAYDIGYGGLDH 975 (1231)
T ss_dssp HHTTTCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTCCSHHHHHHHTTGGGTSCCEEEEEEEHHHHHTTTHHHHHH
T ss_pred HhhccccHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhcCCchHHHHHhhhhhhccCCcEEEEeCcHHHHHcchHHHHH
Confidence 88 88776210 11248999999999 99999999999
Q ss_pred HHHcCCCcEEEEEeC
Q psy15960 163 LVRYRLPVILVILYN 177 (177)
Q Consensus 163 a~r~~lpviiiVlNN 177 (177)
++++++|+++||+||
T Consensus 976 a~~~~~~v~iiVlnN 990 (1231)
T 2c42_A 976 VLASGEDVNVFVMDT 990 (1231)
T ss_dssp HHHTTCSCEEEEEEC
T ss_pred HHHhCCCeEEEEEEC
Confidence 999999999999999
No 24
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.49 E-value=5.8e-14 Score=127.98 Aligned_cols=107 Identities=20% Similarity=0.118 Sum_probs=77.4
Q ss_pred CHHHHHHHhhhhCC-CCceEEccCcchhHHHHHhh----hccCCCce-------------ecCCCcccccchHHHHHHHH
Q psy15960 71 NYYAAIHAVQVSIP-DNCIIVGEGANTMDIGRSLL----LNNLPRHR-------------LDAGTFGTMGVGLGFALAAA 132 (177)
Q Consensus 71 ~~~~~~~~l~~~l~-~~~iiv~dg~~~~~~~~~~~----~~~~p~~~-------------i~~~~~gsmG~~lpaAiGaa 132 (177)
.+..+..+|...+. ++|.++.|.++..+....+. .+...+++ ....+.|+||+++|+|+|++
T Consensus 57 g~v~l~~aL~~~~~~~~D~~v~~~GH~~y~~~~l~G~~~~~~~~r~~~g~~G~p~~~~s~~~~~~~G~~G~gl~~AvG~A 136 (629)
T 2o1x_A 57 GAVDIITALHYVLDSPRDRILFDVGHQAYAHKILTGRRDQMADIKKEGGISGFTKVSESEHDAITVGHASTSLTNALGMA 136 (629)
T ss_dssp HTHHHHHHHHHHSCTTTSEEEESSSTTCHHHHHTTTTGGGGGGTTSTTSCCSSCCGGGCTTCCSCCSSSSCHHHHHHHHH
T ss_pred hHHHHHHHHHhhcCCCCCeEEecCchHHHHHHHHhCcHhHHhCcccCCCCCCCCCCCCCCCCCcCCCcccccHhHHHHHH
Confidence 34556666655565 78888888666533321110 01111111 12456799999999999999
Q ss_pred HHhhhcCCCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 133 LYCNHYAPGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 133 la~~~~~p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
+|.+..+++++|||++|||+|+ |+.++|.||.++++|+++||-||
T Consensus 137 lA~k~~~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~~pli~IvnnN 183 (629)
T 2o1x_A 137 LARDAQGKDFHVAAVIGDGSLTGGMALAALNTIGDMGRKMLIVLNDN 183 (629)
T ss_dssp HHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHHCCSEEEEEEEC
T ss_pred HHHHHhCCCCeEEEEEchhhhhccHHHHHHHHHHhhCCCEEEEEECC
Confidence 9987777999999999999999 77899999999999987777666
No 25
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.42 E-value=6.7e-13 Score=120.75 Aligned_cols=108 Identities=15% Similarity=0.148 Sum_probs=77.0
Q ss_pred CCHHHHHHHhhhhCC-CCceEEccCcchhHHHHHhh-------hccC-------CCc---eecCCCcccccchHHHHHHH
Q psy15960 70 LNYYAAIHAVQVSIP-DNCIIVGEGANTMDIGRSLL-------LNNL-------PRH---RLDAGTFGTMGVGLGFALAA 131 (177)
Q Consensus 70 l~~~~~~~~l~~~l~-~~~iiv~dg~~~~~~~~~~~-------~~~~-------p~~---~i~~~~~gsmG~~lpaAiGa 131 (177)
+....+.-.|...+. ++|.++.|.++..+....+. .+++ |.. -......|+||+++|+|+|+
T Consensus 54 lg~~~~~~~l~~~~~~~~D~~v~~~gH~~y~~~~l~G~~~~~~~~r~~~g~~g~~~~~~s~~~~~~~G~~G~gl~~A~G~ 133 (621)
T 2o1s_A 54 LGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGI 133 (621)
T ss_dssp HTTHHHHHHHHHHSCTTTSEEEESSSTTCHHHHHTTTTGGGGGGTTSTTSCCSSCCTTTCTTCCSCCSSSSCHHHHHHHH
T ss_pred hhHHHHHHHHHhccCCCCCEEEEeCchHHHHHHHHhCCHhhhhcccccCCCCCCCCCCCCCCCccCCcccchHHHHHHHH
Confidence 455566666666666 77888877665433322110 0111 000 01123579999999999999
Q ss_pred HHHhhhcCCCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 132 ALYCNHYAPGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 132 ala~~~~~p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
++|.+...++++|||++|||+|+ |+.++|.+|.++++|+++||-||
T Consensus 134 AlA~~~~~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~~pli~vvnnN 181 (621)
T 2o1s_A 134 AVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDN 181 (621)
T ss_dssp HHHHHHHTSCCCEEEEEETTGGGSHHHHHHHHHHHHHCCSEEEEEEEC
T ss_pred HHHHHHhCCCCeEEEEEchhhhhccHHHHHHHHHHhhCCCEEEEEeCC
Confidence 99987777899999999999999 66789999999999988777676
No 26
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=99.40 E-value=4.5e-13 Score=115.03 Aligned_cols=61 Identities=18% Similarity=0.179 Sum_probs=57.2
Q ss_pred CcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhccc-HHH-HHHHHHcCCCcEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFS-GME-LETLVRYRLPVILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~-~qE-L~Ta~r~~lpviiiVlNN 177 (177)
..|++|.++|.|+|+++|.+...++++||+++|||+|+++ ++| |.+|.++++|+++||.||
T Consensus 142 ~~g~lG~~l~~a~G~A~a~k~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN 204 (367)
T 1umd_A 142 VASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENN 204 (367)
T ss_dssp CCSSTTTTHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEEC
T ss_pred CCchhhhhhhHHHHHHHHHHHhCCCCeEEEEEcccccccCcHHHHHHHHHHhCcCEEEEEecC
Confidence 5689999999999999998888899999999999999999 899 999999999999999998
No 27
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=99.37 E-value=8.9e-13 Score=114.51 Aligned_cols=61 Identities=16% Similarity=0.220 Sum_probs=56.8
Q ss_pred CcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccH--HHHHHHHHcCCCcEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSG--MELETLVRYRLPVILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~--qEL~Ta~r~~lpviiiVlNN 177 (177)
..|+||+++|.|+|+++|.+..+++++|||++|||+|+++. ++|.+|.++++|+++||.||
T Consensus 160 ~~g~lG~~lp~AvG~AlA~~~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN 222 (400)
T 2bfd_A 160 ISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNN 222 (400)
T ss_dssp CCSSTTTHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred cCccccccccHHHHHHHhhhhhCCCCeEEEEECchhhhcChHHHHHHHHHHHCcCEEEEEECC
Confidence 45999999999999999987666789999999999999987 99999999999999999998
No 28
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=99.36 E-value=1.1e-12 Score=112.68 Aligned_cols=63 Identities=16% Similarity=0.073 Sum_probs=57.1
Q ss_pred CCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhccc-H-HHHHHHHHcCCCcEEEEEeC
Q psy15960 115 AGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFS-G-MELETLVRYRLPVILVILYN 177 (177)
Q Consensus 115 ~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~-~-qEL~Ta~r~~lpviiiVlNN 177 (177)
.++.|+||+++|+|+|+++|.+...++++|||++|||+|+++ . .+|.+|.++++|+++||.||
T Consensus 138 ~~~~g~lG~~lp~AvG~A~A~~~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN 202 (368)
T 1w85_A 138 LPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNN 202 (368)
T ss_dssp CCCCCSTTHHHHHHHHHHHHHHHTTCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CCCccccCccccHHHHHHHHhHhhCCCCeEEEEEchhhhhhcHHHHHHHHHHHHCcCEEEEEEcC
Confidence 346799999999999999998877789999999999999986 3 47999999999999999998
No 29
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=99.32 E-value=2.5e-12 Score=111.97 Aligned_cols=61 Identities=26% Similarity=0.203 Sum_probs=55.6
Q ss_pred CcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhccc--HHHHHHHHHcCCCcEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFS--GMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~--~qEL~Ta~r~~lpviiiVlNN 177 (177)
..|+||+++|+|+|+++|.+...++++|||++|||+++++ .++|.+|.++++|+++||.||
T Consensus 179 ~~g~lG~~lp~AvGaA~A~k~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~Vv~NN 241 (407)
T 1qs0_A 179 ISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNN 241 (407)
T ss_dssp CCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred cccccccchhHHHHHHHHHHHhCCCCEEEEEECCchhhcChHHHHHHHHHHHCcCEEEEEECC
Confidence 4699999999999999998877789999999999999986 478999999999988888887
No 30
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=99.30 E-value=4.3e-12 Score=109.05 Aligned_cols=62 Identities=21% Similarity=0.304 Sum_probs=55.7
Q ss_pred CCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhccc--HHHHHHHHHcCCCcEEEEEeC
Q psy15960 116 GTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFS--GMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 116 ~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~--~qEL~Ta~r~~lpviiiVlNN 177 (177)
++.|+||+++|.|+|+++|.+...+++.|||++|||++++. .++|.+|..+++|+++||.||
T Consensus 137 ~~~g~~G~~lp~A~G~A~A~~~~~~~~~vv~~~GDGa~~~G~~~Ealn~A~~~~lpvi~vv~NN 200 (365)
T 2ozl_A 137 GGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENN 200 (365)
T ss_dssp CCCCSTTTHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CCcchhhhhhHHHHHHHHHHHhcCCCceEEEEECchhhhccHHHHHHHHHHHHCcCEEEEEECC
Confidence 34589999999999999998766678999999999999986 458999999999999999998
No 31
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.27 E-value=7.9e-12 Score=114.11 Aligned_cols=61 Identities=18% Similarity=0.258 Sum_probs=52.9
Q ss_pred CcccccchHHHHHHHHHHhhhcC-------CCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYA-------PGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~-------p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
..|+||+++|+|+|+++|.+... .+++|+|++|||+|+ |+.++|.+|.++++|.+|+|+||
T Consensus 112 ~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~livi~nn 181 (632)
T 3l84_A 112 ATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYDS 181 (632)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEEEEEC
Confidence 45999999999999999975432 388999999999999 78899999999999977777765
No 32
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.19 E-value=2e-11 Score=111.15 Aligned_cols=61 Identities=26% Similarity=0.374 Sum_probs=53.6
Q ss_pred CcccccchHHHHHHHHHHhhhcC-CCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYA-PGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~-p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
..|+||+++|+|+|+++|.+..+ ++++|+|++|||+|+ |+.++|.+|.++++|.+++|+||
T Consensus 119 ~~G~lG~gl~~A~G~AlA~~~~~~~~~~vv~v~GDG~~~eG~~~Eal~~A~~~~l~~livi~nn 182 (616)
T 3mos_A 119 ATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDI 182 (616)
T ss_dssp CCCSTTCHHHHHHHHHHHHHHTSCCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred cccccCCccHHHHHHHHHHHHhCCCCCEEEEEECccccccCcHHHHHHHHHHcCCCcEEEEEEC
Confidence 56999999999999999976433 368999999999999 88899999999999988888775
No 33
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.17 E-value=4.1e-11 Score=110.64 Aligned_cols=61 Identities=21% Similarity=0.213 Sum_probs=52.2
Q ss_pred CcccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
..|+||+++|+|+|+++|.+... .+++|+|++|||+|+ |+.++|.+|.++++|.+|+|+||
T Consensus 153 ~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dn 225 (711)
T 3uk1_A 153 TTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDD 225 (711)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CccchhhHHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEEC
Confidence 56999999999999999975322 178999999999999 67889999999999977777765
No 34
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.17 E-value=1.9e-11 Score=112.37 Aligned_cols=62 Identities=19% Similarity=0.216 Sum_probs=54.0
Q ss_pred CCcccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 116 GTFGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 116 ~~~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
...|+||+++|+|+|+++|.+... ++++|+|++|||+++ |+.++|.+|.+++|+.+|+|+||
T Consensus 124 ~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~n 197 (675)
T 1itz_A 124 VTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDD 197 (675)
T ss_dssp SCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred ECCccHHhHHHHHHHHHHHhhhhcccccccccCCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEEC
Confidence 357999999999999999975433 689999999999999 78899999999999877777765
No 35
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.16 E-value=5.2e-11 Score=109.25 Aligned_cols=61 Identities=18% Similarity=0.162 Sum_probs=52.4
Q ss_pred CcccccchHHHHHHHHHHhhhcCC----------CCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYAP----------GKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~p----------~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
..|+||+++|+|+|+++|.+.... +++|+|++|||+++ |+.++|.+|.+++||.+|+|+||
T Consensus 114 ~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dn 186 (663)
T 3kom_A 114 TTGPLGQGVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDD 186 (663)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEE
T ss_pred CCcchhhHHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEEC
Confidence 569999999999999999753321 78999999999999 67889999999999977777765
No 36
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.16 E-value=2.1e-11 Score=111.57 Aligned_cols=62 Identities=21% Similarity=0.237 Sum_probs=53.8
Q ss_pred CCcccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 116 GTFGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 116 ~~~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
...|+||+++|+|+|+++|.+... ++++|+|++|||+++ |+.++|.+|.+++||.+|+|+||
T Consensus 115 ~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~n 188 (651)
T 2e6k_A 115 VTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDD 188 (651)
T ss_dssp SCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred eccccccchHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEEC
Confidence 467999999999999999975432 588999999999999 67889999999999977777765
No 37
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.16 E-value=4.7e-11 Score=109.95 Aligned_cols=61 Identities=21% Similarity=0.276 Sum_probs=52.6
Q ss_pred CcccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
..|+||+++|+|+|+++|.+... .+++|+|++|||+++ |+.++|.+|.++++|.+|+|+||
T Consensus 138 ~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dn 210 (690)
T 3m49_A 138 TTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDS 210 (690)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CCccccccHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEEC
Confidence 56999999999999999976432 178999999999999 57899999999999977777765
No 38
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.12 E-value=4.6e-11 Score=109.67 Aligned_cols=63 Identities=17% Similarity=0.179 Sum_probs=53.6
Q ss_pred CCCcccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 115 AGTFGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 115 ~~~~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
....|+||+++|+|+|+++|.+... .+++|+|++|||+++ |+.++|.+|.++++|.+|+|+||
T Consensus 110 ~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~n 184 (669)
T 2r8o_A 110 ETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDD 184 (669)
T ss_dssp CSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred ccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3467999999999999999965321 378999999999999 67889999999999977777765
No 39
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.11 E-value=1.4e-10 Score=106.59 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=52.9
Q ss_pred CCcccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 116 GTFGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 116 ~~~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
...|+||+++|+|+|+++|.+... .+++|+|++|||+++ |+.++|.+|.+++||.+|+|+||
T Consensus 113 ~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~n 186 (680)
T 1gpu_A 113 VTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDD 186 (680)
T ss_dssp SCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred eccccccchHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHHhCCCcEEEEEEC
Confidence 356999999999999999975331 378999999999999 77899999999999977777765
No 40
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.04 E-value=3.9e-10 Score=103.58 Aligned_cols=62 Identities=23% Similarity=0.206 Sum_probs=52.0
Q ss_pred CCcccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhhccc--HHHHHHHHHcCCCcEEEEEeC
Q psy15960 116 GTFGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAFGFS--GMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 116 ~~~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf~m~--~qEL~Ta~r~~lpviiiVlNN 177 (177)
...|+||+++|.|+|+++|.+... .+++|+|++|||++++. .+++.+|.+++||.+|+|+||
T Consensus 113 ~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~ 186 (673)
T 1r9j_A 113 VTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDS 186 (673)
T ss_dssp SCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEE
T ss_pred eccCCCCCcHHHHHHHHHHHHHhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEEC
Confidence 357999999999999999976432 58899999999999965 678999999999966666654
No 41
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=98.57 E-value=2.3e-08 Score=94.09 Aligned_cols=60 Identities=13% Similarity=-0.010 Sum_probs=53.0
Q ss_pred cccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhh--cccHHH-HHHHHHcCCC---cEEEEEeC
Q psy15960 118 FGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAF--GFSGME-LETLVRYRLP---VILVILYN 177 (177)
Q Consensus 118 ~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf--~m~~qE-L~Ta~r~~lp---viiiVlNN 177 (177)
-++||+++|.|+|+++|.+... .+..|+|+.|||+| ++.++| |.+|..+++| +++||.||
T Consensus 244 ~s~Lg~~~P~A~G~A~A~k~~~~~~~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~NN 319 (868)
T 2yic_A 244 PSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNN 319 (868)
T ss_dssp CSSTTTTHHHHHHHHHHHHHHHTCSTTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEEEC
T ss_pred CccccccccHHHHHHHHHHhhccCCcccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEEcC
Confidence 4678999999999999987642 45689999999998 688998 9999999999 99999999
No 42
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=98.54 E-value=9.9e-08 Score=88.03 Aligned_cols=61 Identities=18% Similarity=0.151 Sum_probs=50.4
Q ss_pred CcccccchHHHHHHHHHHhhhc-------------CCCCeEEEEEcchhhccc--HHHHHHHHHcCCC-cEEEEEeC
Q psy15960 117 TFGTMGVGLGFALAAALYCNHY-------------APGKRVVCVQGDSAFGFS--GMELETLVRYRLP-VILVILYN 177 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~-------------~p~r~vv~i~GDGsf~m~--~qEL~Ta~r~~lp-viiiVlNN 177 (177)
..|++|.++|.|+|+++|.+.. ..+++|+|++|||+++.. ...+.+|.+++|| +++||-||
T Consensus 131 ~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~N 207 (700)
T 3rim_A 131 TTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDRN 207 (700)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred cccccCCcchHHHHHHHHHHHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEECC
Confidence 4589999999999999998753 347899999999999965 4589999999997 55555555
No 43
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=98.48 E-value=1.3e-07 Score=89.27 Aligned_cols=63 Identities=17% Similarity=0.130 Sum_probs=53.1
Q ss_pred CCCcccccchHHHHHHHHHHhhh-------cCCCCeEEEEEcchhhc--ccHHHHHHHHHcCCCcEEEEEeC
Q psy15960 115 AGTFGTMGVGLGFALAAALYCNH-------YAPGKRVVCVQGDSAFG--FSGMELETLVRYRLPVILVILYN 177 (177)
Q Consensus 115 ~~~~gsmG~~lpaAiGaala~~~-------~~p~r~vv~i~GDGsf~--m~~qEL~Ta~r~~lpviiiVlNN 177 (177)
....|+||.++++|+|+++|.+. ..++++|+|++|||++. ++...|..|.+++|+-+|||+||
T Consensus 188 ~~~tG~~G~g~s~AiG~A~a~~~l~~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~ 259 (886)
T 2qtc_A 188 QFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINC 259 (886)
T ss_dssp CCCCCSTTHHHHHHHHHHHHHHHHHHTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEE
T ss_pred cccccccCccHHHHHHHHHHhhhhcccccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEEC
Confidence 33569999999999999999765 45789999999999998 56779999999999866666664
No 44
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=98.43 E-value=1.2e-07 Score=91.40 Aligned_cols=60 Identities=13% Similarity=-0.010 Sum_probs=53.4
Q ss_pred cccccchHHHHHHHHHHhhhcC----------CCCeEEEEEcchhh--cccHHH-HHHHHHcCCC---cEEEEEeC
Q psy15960 118 FGTMGVGLGFALAAALYCNHYA----------PGKRVVCVQGDSAF--GFSGME-LETLVRYRLP---VILVILYN 177 (177)
Q Consensus 118 ~gsmG~~lpaAiGaala~~~~~----------p~r~vv~i~GDGsf--~m~~qE-L~Ta~r~~lp---viiiVlNN 177 (177)
.+++|.++|.|+|+++|.+... .++.++|+.|||+| +..++| |.+|..+++| +++||.||
T Consensus 489 ~s~Lg~~~p~A~G~A~A~k~~~~~~~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~NN 564 (1113)
T 2xt6_A 489 PSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNN 564 (1113)
T ss_dssp CSSTTTTHHHHHHHHHHHHHHTTBSTTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEEEC
T ss_pred CccccccccHHHHHHHHHHHhccccCccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEEeC
Confidence 4789999999999999988643 45789999999998 788998 9999999998 99999999
No 45
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=98.33 E-value=3.1e-07 Score=87.08 Aligned_cols=60 Identities=10% Similarity=0.014 Sum_probs=52.0
Q ss_pred cccccchHHHHHHHHHHhhhcC-----CCCeEEEEEcchhh--cccHHH-HHHHHHcCCC---cEEEEEeC
Q psy15960 118 FGTMGVGLGFALAAALYCNHYA-----PGKRVVCVQGDSAF--GFSGME-LETLVRYRLP---VILVILYN 177 (177)
Q Consensus 118 ~gsmG~~lpaAiGaala~~~~~-----p~r~vv~i~GDGsf--~m~~qE-L~Ta~r~~lp---viiiVlNN 177 (177)
-+.+|.++|.|+|+++|.+... .+..|||++|||+| +..++| |.+|..+++| +++||.||
T Consensus 320 ~shlg~~~p~A~G~A~A~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN 390 (933)
T 2jgd_A 320 PSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINN 390 (933)
T ss_dssp CSSTTCHHHHHHHHHHHHHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEEC
T ss_pred CcccccccCHHHHHHHHHHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeC
Confidence 3567899999999999987642 45689999999998 777888 8999999999 99999998
No 46
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=96.06 E-value=0.0049 Score=57.89 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=30.5
Q ss_pred CcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhc
Q psy15960 117 TFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFG 154 (177)
Q Consensus 117 ~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~ 154 (177)
..|++|+|++.|+|+++. +|+.+|+|++|||...
T Consensus 173 ~tG~LGqGls~AvG~A~~----~~~~~v~~~~GDGe~e 206 (845)
T 3ahc_A 173 EGGELGYALSHAYGAVMN----NPSLFVPCIIGDGEAE 206 (845)
T ss_dssp CCSSTTCHHHHHHHHHTT----CTTCEEEEEEETTGGG
T ss_pred CCCCccchHhHHhhhhhc----CCCCeEEEEECCCchh
Confidence 459999999999999987 7899999999999943
No 47
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=79.58 E-value=1.8 Score=34.41 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=41.6
Q ss_pred ceEEccCcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcc-----------
Q psy15960 87 CIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGF----------- 155 (177)
Q Consensus 87 ~iiv~dg~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m----------- 155 (177)
.++|+.|++. -.+ .|.+||++...|.||+++.-+ ++ ..+-.|+++.|..+..-
T Consensus 5 ~vlVTgG~T~-------E~I-DpVR~ItN~SSG~mG~aiA~~----~~----~~Ga~V~lv~~~~~~~~~~~~~~~~~~v 68 (232)
T 2gk4_A 5 KILVTSGGTS-------EAI-DSVRSITNHSTGHLGKIITET----LL----SAGYEVCLITTKRALKPEPHPNLSIREI 68 (232)
T ss_dssp EEEEECSBCE-------EES-SSSEEEEECCCCHHHHHHHHH----HH----HTTCEEEEEECTTSCCCCCCTTEEEEEC
T ss_pred EEEEeCCCcc-------ccc-CceeeccCCCCCHHHHHHHHH----HH----HCCCEEEEEeCCccccccCCCCeEEEEH
Confidence 4666665543 122 388999988888788755433 33 24557999998876532
Q ss_pred -cHHHHHHHHHcCC
Q psy15960 156 -SGMELETLVRYRL 168 (177)
Q Consensus 156 -~~qEL~Ta~r~~l 168 (177)
+.+|+..+++...
T Consensus 69 ~s~~em~~~v~~~~ 82 (232)
T 2gk4_A 69 TNTKDLLIEMQERV 82 (232)
T ss_dssp CSHHHHHHHHHHHG
T ss_pred hHHHHHHHHHHHhc
Confidence 4677777665433
No 48
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=73.39 E-value=4 Score=32.20 Aligned_cols=69 Identities=22% Similarity=0.306 Sum_probs=40.5
Q ss_pred CCCCceEEccCcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhc--------
Q psy15960 83 IPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFG-------- 154 (177)
Q Consensus 83 l~~~~iiv~dg~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~-------- 154 (177)
|....++|+.|++. -.+ .|.+||++...|.||+++. -+++ ..+-.|+++.|..+..
T Consensus 6 l~gk~vlVTgG~T~-------E~i-DpVR~itN~SSg~iG~aiA----~~~~----~~Ga~V~l~~~~~~l~~~~g~~~~ 69 (226)
T 1u7z_A 6 LKHLNIMITAGPTR-------EPL-DPVRYISDHSSGKMGFAIA----AAAA----RRGANVTLVSGPVSLPTPPFVKRV 69 (226)
T ss_dssp TTTCEEEEEESBCE-------EES-SSSEEEEECCCSHHHHHHH----HHHH----HTTCEEEEEECSCCCCCCTTEEEE
T ss_pred CCCCEEEEECCCCC-------ccc-CceeeccCCCccHHHHHHH----HHHH----HCCCEEEEEECCcccccCCCCeEE
Confidence 34455777775533 112 3899999887777776554 3333 2345788887765432
Q ss_pred --ccHHHHHHHHHcC
Q psy15960 155 --FSGMELETLVRYR 167 (177)
Q Consensus 155 --m~~qEL~Ta~r~~ 167 (177)
-+.+++..++...
T Consensus 70 dv~~~~~~~~~v~~~ 84 (226)
T 1u7z_A 70 DVMTALEMEAAVNAS 84 (226)
T ss_dssp ECCSHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHh
Confidence 2466666665443
No 49
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=73.30 E-value=1.6 Score=37.03 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEEe
Q psy15960 124 GLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVILY 176 (177)
Q Consensus 124 ~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlN 176 (177)
++++|+|++.+ ..|.++...|.|-..| ...|.++....+|+++++.+
T Consensus 76 a~~~a~Gaa~a-----G~r~~~~ts~~G~~~~-~d~l~~aa~~~~P~Vi~~~~ 122 (395)
T 1yd7_A 76 SIAAAIGASWA-----GAKAMTATSGPGFSLM-QENIGYAVMTETPVVIVDVQ 122 (395)
T ss_dssp HHHHHHHHHHT-----TCCEEEEEETTHHHHH-TTTCC----CCCCEEEEEEC
T ss_pred HHHHHHHHHHh-----CCcEEEEeCchHHHHH-HHHHHHHHhcCCCEEEEEee
Confidence 56667777776 4556666667774443 34566666777887777653
No 50
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=65.68 E-value=3.7 Score=34.04 Aligned_cols=56 Identities=20% Similarity=0.158 Sum_probs=38.1
Q ss_pred CCCc-eEEccCcchhHHHHHhhhcc-CCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhc
Q psy15960 84 PDNC-IIVGEGANTMDIGRSLLLNN-LPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFG 154 (177)
Q Consensus 84 ~~~~-iiv~dg~~~~~~~~~~~~~~-~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~ 154 (177)
.... |+|+-|++. -.+. .|.+||++...|.||+++.-+ +. ..+-.|+++.|.+++.
T Consensus 35 ~gk~~VLITaGgT~-------EpID~DpVRfItN~SSGkmG~aiAe~----~~----~~Ga~V~lv~g~~sl~ 92 (313)
T 1p9o_A 35 QGRRVVLVTSGGTK-------VPLEARPVRFLDNFSSGRRGATSAEA----FL----AAGYGVLFLYRARSAF 92 (313)
T ss_dssp TTCCEEEEEESBCE-------EESSSSCSEEEEECCCCHHHHHHHHH----HH----HTTCEEEEEEETTSCC
T ss_pred cCCeEEEEeCCCcc-------cccCCCceeEecCCCCcHHHHHHHHH----HH----HCCCEEEEEecCCCcC
Confidence 3345 777776654 2343 689999998888888765432 22 2456899999988864
No 51
>2keg_A PLNK; protein, peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2keh_A
Probab=62.96 E-value=3.1 Score=22.09 Aligned_cols=14 Identities=29% Similarity=0.707 Sum_probs=10.9
Q ss_pred ccccchHHHHHHHH
Q psy15960 119 GTMGVGLGFALAAA 132 (177)
Q Consensus 119 gsmG~~lpaAiGaa 132 (177)
..|||++++|+||-
T Consensus 6 ngigyaigyafgav 19 (32)
T 2keg_A 6 NGIGYAIGYAFGAV 19 (32)
T ss_dssp SSSHHHHHHHHHHH
T ss_pred cCcceeehhhhhHH
Confidence 46888888888864
No 52
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=47.86 E-value=11 Score=29.03 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=29.4
Q ss_pred CCCeEEEEEcchhhcccHH--HHHHHH-HcCCCcEEEEE
Q psy15960 140 PGKRVVCVQGDSAFGFSGM--ELETLV-RYRLPVILVIL 175 (177)
Q Consensus 140 p~r~vv~i~GDGsf~m~~q--EL~Ta~-r~~lpviiiVl 175 (177)
..+.+|+++|+=.-.-..+ |+.+|+ +.++|++++-.
T Consensus 79 ~Sk~vIllIs~~T~~s~~v~wEIe~Ai~~~~~PII~Vy~ 117 (189)
T 3hyn_A 79 NSKNIILFLSSITANSRALREEMNYGIGTKGLPVIVIYP 117 (189)
T ss_dssp TEEEEEEECCTTCCCCHHHHHHHHHHTTTTCCCEEEEET
T ss_pred hcCcEEEEEecCccccchhHHHHHHHHHhcCCcEEEEEC
Confidence 4568999999988877644 999999 99999887743
No 53
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=40.86 E-value=38 Score=33.06 Aligned_cols=47 Identities=9% Similarity=-0.022 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEEe
Q psy15960 124 GLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVILY 176 (177)
Q Consensus 124 ~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVlN 176 (177)
++++++||+.| - .|++..+--.+|.....-|..++-..+|++|++.+
T Consensus 66 A~~aaiGAa~a-----G-aR~~t~Ts~~Gl~lm~e~l~~~ag~~~P~Vi~va~ 112 (1231)
T 2c42_A 66 AAGAVHGALAA-----G-ALTTTFTASQGLLLMIPNMYKISGELLPGVFHVTA 112 (1231)
T ss_dssp HHHHHHHHHHT-----T-CCEEEEECHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHHHc-----C-ChHhhhccHHHHHHHHHHHHHHhCCCCCEEEEECC
Confidence 56778888886 2 34555555455655556676777678999888764
No 54
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=39.07 E-value=32 Score=30.68 Aligned_cols=61 Identities=20% Similarity=0.197 Sum_probs=37.6
Q ss_pred cCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccH-HHHHHHHHcCCCcEEEEE
Q psy15960 107 NLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSG-MELETLVRYRLPVILVIL 175 (177)
Q Consensus 107 ~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~-qEL~Ta~r~~lpviiiVl 175 (177)
..|.+++..+- +=-..++.|.|++++ --|+++.+.+++.. ... |-+..++..++|+++++-
T Consensus 358 ~~~~r~~~~gI--aE~~~~~~a~G~A~~-----G~rp~~~~~~~F~~-~a~dqi~~~~a~~~~pvv~~~~ 419 (621)
T 2o1s_A 358 KFPDRYFDVAI--AEQHAVTFAAGLAIG-----GYKPIVAIYSTFLQ-RAYDQVLHDVAIQKLPVLFAID 419 (621)
T ss_dssp HCTTTEEECCS--CHHHHHHHHHHHHHT-----TCEEEEEEETTGGG-GGHHHHHHTTTTTTCCCEEEEE
T ss_pred hCCCceEecCc--CHHHHHHHHHHHHHC-----CCEEEEEehHhHHH-HHHHHHHHHHHhcCCCEEEEEE
Confidence 34777764321 101245677887775 35778888877643 333 445557788999888764
No 55
>2w0y_A APH, alkaline phosphatase; hydrolase, halophilic; 1.7A {Halobacterium salinarum R1} PDB: 2x98_A
Probab=37.93 E-value=23 Score=31.06 Aligned_cols=22 Identities=9% Similarity=0.199 Sum_probs=17.1
Q ss_pred CCCeEEEEEcchhhcccHHHHHHHH
Q psy15960 140 PGKRVVCVQGDSAFGFSGMELETLV 164 (177)
Q Consensus 140 p~r~vv~i~GDGsf~m~~qEL~Ta~ 164 (177)
+-|-||.|+||| |++..+..+.
T Consensus 46 ~aKNVIlfIGDG---Mg~~~~taaR 67 (473)
T 2w0y_A 46 PAANAIAYIVDG---MGQTQISAAR 67 (473)
T ss_dssp SCSEEEEEEEEE---CCHHHHHHHH
T ss_pred CCCeEEEEEeCC---CCHHHHHHHH
Confidence 457899999999 7777666654
No 56
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=37.38 E-value=1.3e+02 Score=26.77 Aligned_cols=61 Identities=7% Similarity=-0.128 Sum_probs=38.0
Q ss_pred cCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEE
Q psy15960 107 NLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVI 174 (177)
Q Consensus 107 ~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiV 174 (177)
..|.+++..+- +=-..+++|.|++++ ...+++++..+++.. .....|......++|+++++
T Consensus 352 ~~p~R~~d~gI--aE~~~v~~a~G~A~~----G~~~~~~~~f~~Fl~-~a~dqi~~~a~~~~~v~~v~ 412 (616)
T 3mos_A 352 EHPDRFIECYI--AEQNMVSIAVGCATR----NRTVPFCSTFAAFFT-RAFDQIRMAAISESNINLCG 412 (616)
T ss_dssp HCGGGEEECCS--CHHHHHHHHHHHHGG----GCCEEEEEEEGGGGG-GGHHHHHHHHHTTCCEEEEE
T ss_pred hCCCCeEEcCc--cHHHHHHHHHHHHHc----CCCCEEEEehHHHHH-HHHHHHHHHHHhCCCeEEEE
Confidence 45777774321 112356778888876 322466678899865 44555556677889987764
No 57
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=36.35 E-value=54 Score=23.73 Aligned_cols=37 Identities=5% Similarity=-0.074 Sum_probs=22.2
Q ss_pred CCCe-EEEEEcchhhcccH---HHHHHHH-HcCCCcEEEEEe
Q psy15960 140 PGKR-VVCVQGDSAFGFSG---MELETLV-RYRLPVILVILY 176 (177)
Q Consensus 140 p~r~-vv~i~GDGsf~m~~---qEL~Ta~-r~~lpviiiVlN 176 (177)
.+.+ ++++.|+---.... .++.... +.+.++.+.++.
T Consensus 168 ~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 209 (239)
T 3u0v_A 168 GVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFP 209 (239)
T ss_dssp SCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEET
T ss_pred cCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeC
Confidence 3455 88888887776664 2444433 335566666654
No 58
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=35.83 E-value=1.8e+02 Score=23.85 Aligned_cols=93 Identities=16% Similarity=0.236 Sum_probs=47.9
Q ss_pred HHHHHHHhhhhCCCCceEEccCcchh-HHHH---HhhhccCCCceecCCCcccccchHHHHHHHHHH--hhhcCCCCeEE
Q psy15960 72 YYAAIHAVQVSIPDNCIIVGEGANTM-DIGR---SLLLNNLPRHRLDAGTFGTMGVGLGFALAAALY--CNHYAPGKRVV 145 (177)
Q Consensus 72 ~~~~~~~l~~~l~~~~iiv~dg~~~~-~~~~---~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala--~~~~~p~r~vv 145 (177)
-.-++++|++.+ +.+++.-|.+.- .+.. ..+.++.|...+... .++++-.++.++- ++. -+..+|+ +|
T Consensus 25 ~~p~~~~l~~~~--~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~~-~~~~~~~~~~~~~-~l~~~l~~~kPD--~V 98 (385)
T 4hwg_A 25 LCCVISEFDKHT--KHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVA-ADNTAKSIGLVIE-KVDEVLEKEKPD--AV 98 (385)
T ss_dssp HHHHHHHHHHHS--EEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCCC-CCCSHHHHHHHHH-HHHHHHHHHCCS--EE
T ss_pred HHHHHHHHHhcC--CEEEEEeCCCCChhHHHHHHhhCCCCCCceecCCC-CCCHHHHHHHHHH-HHHHHHHhcCCc--EE
Confidence 455777787662 344555555521 1111 113344566555443 2455444443322 111 1122455 78
Q ss_pred EEEcchhhcccHHHHHHHHHcCCCcEEE
Q psy15960 146 CVQGDSAFGFSGMELETLVRYRLPVILV 173 (177)
Q Consensus 146 ~i~GDGsf~m~~qEL~Ta~r~~lpviii 173 (177)
++.||=...+. ...|.+.++|+..+
T Consensus 99 lv~gd~~~~~a---alaA~~~~IPv~h~ 123 (385)
T 4hwg_A 99 LFYGDTNSCLS---AIAAKRRKIPIFHM 123 (385)
T ss_dssp EEESCSGGGGG---HHHHHHTTCCEEEE
T ss_pred EEECCchHHHH---HHHHHHhCCCEEEE
Confidence 88898666554 45677889996544
No 59
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=35.38 E-value=50 Score=27.51 Aligned_cols=59 Identities=24% Similarity=0.270 Sum_probs=32.2
Q ss_pred CCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEE-EcchhhcccHHHHHH-HHHc--------CCCcEEEEE
Q psy15960 109 PRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCV-QGDSAFGFSGMELET-LVRY--------RLPVILVIL 175 (177)
Q Consensus 109 p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i-~GDGsf~m~~qEL~T-a~r~--------~lpviiiVl 175 (177)
|.+++..+- +=-..++.|.|++++ --|+++.+ .+|.. +.....|.. ++.. ++|+++++-
T Consensus 97 p~r~~d~gI--aE~~~v~~a~G~A~~-----G~rpv~~~tf~~Fl-~~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~ 165 (369)
T 1ik6_A 97 PERVIDTPL--NEGGILGFAMGMAMA-----GLKPVAEIQFVDFI-WLGADELLNHIAKLRYRSGGNYKAPLVVRTP 165 (369)
T ss_dssp TTTEEECCS--CHHHHHHHHHHHHHT-----TCEEEEECCCC-----CCHHHHHHHHHHHHC------CCCCEEEEE
T ss_pred CCcEEECcc--cHHHHHHHHHHHHHC-----CCeeEEEecchhHH-HHHHHHHHHHHHHHHHhhCCCCCCCEEEEEe
Confidence 667764321 111246678887775 34666665 88876 455444443 4433 899888764
No 60
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=33.97 E-value=34 Score=30.61 Aligned_cols=61 Identities=23% Similarity=0.130 Sum_probs=36.7
Q ss_pred cCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccH-HHHHHHHHcCCCcEEEEE
Q psy15960 107 NLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSG-MELETLVRYRLPVILVIL 175 (177)
Q Consensus 107 ~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~-qEL~Ta~r~~lpviiiVl 175 (177)
..|.+++..+- . =-..++.|.|++++ --|+++.+..++.. ... |-+..++..++|+++++-
T Consensus 361 ~~~~r~~~~gI-a-E~~~~~~a~G~A~~-----G~rp~~~~~~~F~~-~a~dqi~~~~a~~~~pvv~~~~ 422 (629)
T 2o1x_A 361 VHPHRYLDVGI-A-EEVAVTTAAGMALQ-----GMRPVVAIYSTFLQ-RAYDQVLHDVAIEHLNVTFCID 422 (629)
T ss_dssp HCGGGEEECCS-C-HHHHHHHHHHHHHT-----TCEEEEEEEHHHHG-GGHHHHHHTTTTTTCCCEEEEE
T ss_pred hcCcceEeccc-c-HHHHHHHHHHHHHc-----CCEEEEEecHHHHH-HHHHHHHHHHhhcCCCEEEEEE
Confidence 34777774321 1 01245567787775 45777777776532 222 445557788999888764
No 61
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=33.32 E-value=78 Score=25.72 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=22.9
Q ss_pred CCeEEEEEcchhhccc--------HHHHHHHH----HcCCCcEEEEEe
Q psy15960 141 GKRVVCVQGDSAFGFS--------GMELETLV----RYRLPVILVILY 176 (177)
Q Consensus 141 ~r~vv~i~GDGsf~m~--------~qEL~Ta~----r~~lpviiiVlN 176 (177)
+.|+|++++=||..|. .+.+..+. ..++|++.+|..
T Consensus 153 ~~PvI~l~~sGGarlqeg~~~l~~~~~i~~al~~~~~~~vP~IavV~G 200 (304)
T 2f9y_B 153 NCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTD 200 (304)
T ss_dssp TCCEEEEEEESSBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 6799999988887762 12222222 237888777753
No 62
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=31.49 E-value=60 Score=25.64 Aligned_cols=14 Identities=21% Similarity=0.325 Sum_probs=6.6
Q ss_pred ccchHHHHHHHHHH
Q psy15960 121 MGVGLGFALAAALY 134 (177)
Q Consensus 121 mG~~lpaAiGaala 134 (177)
+|++.|+++...+|
T Consensus 162 ~GfS~Gg~~a~~~a 175 (285)
T 4fhz_A 162 VGFSQGTMMALHVA 175 (285)
T ss_dssp EEETHHHHHHHHHH
T ss_pred EEeCHHHHHHHHHH
Confidence 44444444444444
No 63
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=27.38 E-value=47 Score=27.27 Aligned_cols=59 Identities=10% Similarity=-0.031 Sum_probs=34.2
Q ss_pred CCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEE-EcchhhcccHHHHH-HHH--------HcCCCcEEEEE
Q psy15960 109 PRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCV-QGDSAFGFSGMELE-TLV--------RYRLPVILVIL 175 (177)
Q Consensus 109 p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i-~GDGsf~m~~qEL~-Ta~--------r~~lpviiiVl 175 (177)
|.+++..+- +=-..++.|.|++++ --|+++.+ .+|.. +.....+. .+. ..++|+++++-
T Consensus 61 p~r~~d~gI--aE~~~v~~a~G~A~~-----G~rp~~~~~f~~F~-~~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~ 129 (341)
T 2ozl_B 61 DKRIIDTPI--SEMGFAGIAVGAAMA-----GLRPICEFMTFNFS-MQAIDQVINSAAKTYYMSGGLQPVPIVFRGP 129 (341)
T ss_dssp TTTEEECCS--CHHHHHHHHHHHHHT-----TCEEEEECSSGGGG-GGGHHHHHTTTTTHHHHTTSSCCCCCEEEEE
T ss_pred CCcEEECch--hHHHHHHHHHHHHHC-----CCEEEEEeccHHHH-HHHHHHHHHHHHHHHhhccccCCCCEEEEEc
Confidence 667764321 111246678888775 34566654 78886 44444444 333 27899888764
No 64
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=25.52 E-value=3.2e+02 Score=23.54 Aligned_cols=44 Identities=18% Similarity=0.015 Sum_probs=25.4
Q ss_pred HHHHHHHHhhhcCCCCeEEEEEcch-hhcccHHHHHHHHHcCCCcEEEEE
Q psy15960 127 FALAAALYCNHYAPGKRVVCVQGDS-AFGFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 127 aAiGaala~~~~~p~r~vv~i~GDG-sf~m~~qEL~Ta~r~~lpviiiVl 175 (177)
+|.|.+-+ .+|+.+|++-=| |..-.+..+.+|...++|+++|.-
T Consensus 63 ~A~Gyar~-----tg~p~v~~~TsGpG~~N~~~~l~~A~~~~vPll~itg 107 (566)
T 1ozh_A 63 MAAAVGRI-----TGKAGVALVTSGPGCSNLITGMATANSEGDPVVALGG 107 (566)
T ss_dssp HHHHHHHH-----HSSCEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHH-----HCCCEEEEEccChHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 45554443 345655555333 233346677777777888777653
No 65
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=25.36 E-value=2.4e+02 Score=21.90 Aligned_cols=26 Identities=12% Similarity=-0.049 Sum_probs=19.9
Q ss_pred CCCHHHHHHHhhhhCCCCceEEccCc
Q psy15960 69 PLNYYAAIHAVQVSIPDNCIIVGEGA 94 (177)
Q Consensus 69 ~l~~~~~~~~l~~~l~~~~iiv~dg~ 94 (177)
.+....+.+.+.+...+.++++.||.
T Consensus 110 ~~~~~~i~~~~~~l~~~~D~vlIEGa 135 (251)
T 3fgn_A 110 LPARDQIVRLIADLDRPGRLTLVEGA 135 (251)
T ss_dssp CCCHHHHHHHHHTTCCTTCEEEEECS
T ss_pred CCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 56778888888877777788888853
No 66
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=25.20 E-value=3.1e+02 Score=23.77 Aligned_cols=93 Identities=14% Similarity=0.094 Sum_probs=48.4
Q ss_pred HHHHHHhhhhCCCCceEEccCcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchh
Q psy15960 73 YAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSA 152 (177)
Q Consensus 73 ~~~~~~l~~~l~~~~iiv~dg~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGs 152 (177)
+.+++.|.+ ..=+.++..=|+....+... +.-...-+++....-.+ +.-+|.|.+-+ .+|+.+|++-=|.
T Consensus 16 ~~l~~~L~~-~GV~~vfg~PG~~~~~l~~a-l~~~~~i~~i~~~~E~~---Aa~~A~Gyar~-----tg~p~v~~~TsGp 85 (590)
T 1ybh_A 16 DILVEALER-QGVETVFAYPGGASMEIHQA-LTRSSSIRNVLPRHEQG---GVFAAEGYARS-----SGKPGICIATSGP 85 (590)
T ss_dssp HHHHHHHHT-TTCCEEEECCCGGGHHHHHH-HHHCSSCEECCCSSHHH---HHHHHHHHHHH-----HSSCEEEEECTTH
T ss_pred HHHHHHHHH-cCCCEEEEcCCCchHHHHHH-HhccCCccEEeeCCHHH---HHHHHHHHHHH-----HCCCEEEEeccCc
Confidence 344444443 23344444446655444332 22112234444333332 23356665554 3556666653332
Q ss_pred -hcccHHHHHHHHHcCCCcEEEEE
Q psy15960 153 -FGFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 153 -f~m~~qEL~Ta~r~~lpviiiVl 175 (177)
..-.+..+.+|...++|+++|.-
T Consensus 86 G~~N~~~gv~~A~~~~vPll~itg 109 (590)
T 1ybh_A 86 GATNLVSGLADALLDSVPLVAITG 109 (590)
T ss_dssp HHHTTHHHHHHHHHHTCCEEEEEE
T ss_pred hHHHHHHHHHHHHhhCCCEEEEeC
Confidence 44447789999999999888764
No 67
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=25.16 E-value=53 Score=26.56 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=32.2
Q ss_pred CCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEE-EcchhhcccHHHHHH-HHH--------cCCCcEEEE
Q psy15960 109 PRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCV-QGDSAFGFSGMELET-LVR--------YRLPVILVI 174 (177)
Q Consensus 109 p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i-~GDGsf~m~~qEL~T-a~r--------~~lpviiiV 174 (177)
|.+++..+- .- -..++.|.|++++ . -|+++.+ .+++. +.....+.. +.. .++|+++++
T Consensus 50 p~r~~~~gI-aE-~~~v~~a~G~A~~----G-~~p~~~~t~~~F~-~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~ 117 (324)
T 1umd_B 50 PDRVMDTPL-SE-AAIVGAALGMAAH----G-LRPVAEIQFADYI-FPGFDQLVSQVAKLRYRSGGQFTAPLVVRM 117 (324)
T ss_dssp TTTEEECCS-CH-HHHHHHHHHHHHH----T-CEEEEECSSGGGC-GGGHHHHHHTTTTHHHHTTTSSCCCCEEEE
T ss_pred CCcEEECch-hH-HHHHHHHHHHHHC----C-CEEEEEeccHhHH-HHHHHHHHHHHHHHHhhcCCCCcCCEEEEE
Confidence 667664322 11 1246678888776 2 3566655 77775 444433432 332 688888765
No 68
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=25.13 E-value=41 Score=27.24 Aligned_cols=58 Identities=16% Similarity=0.035 Sum_probs=32.3
Q ss_pred CCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEE-EcchhhcccHHHHH-HHHH--------cCCCcEEEE
Q psy15960 109 PRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCV-QGDSAFGFSGMELE-TLVR--------YRLPVILVI 174 (177)
Q Consensus 109 p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i-~GDGsf~m~~qEL~-Ta~r--------~~lpviiiV 174 (177)
|.+++..+- +=-..++.|.|++++ --|+++.+ .+++. +.....+. .+.. .++|+++++
T Consensus 49 p~r~~~~gI--aE~~~v~~a~G~A~~-----G~rp~~~~t~~~F~-~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~ 116 (324)
T 1w85_B 49 EDRVFDTPL--AESGIGGLAIGLALQ-----GFRPVPEIQFFGFV-YEVMDSICGQMARIRYRTGGRYHMPITIRS 116 (324)
T ss_dssp TTTEEECCS--CHHHHHHHHHHHHHT-----TCEEEEBCSSGGGG-GGTHHHHHTTGGGHHHHTTTSSCCCCEEEE
T ss_pred CCcEEEcch--hHHHHHHHHHHHHhC-----CCEEEEEecchhHH-HHHHHHHHHHHHHHhhhccCCCcCCEEEEE
Confidence 667764321 111356678888775 34555555 67775 44444443 2332 688988764
No 69
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=24.70 E-value=3.1e+02 Score=23.94 Aligned_cols=92 Identities=17% Similarity=0.044 Sum_probs=45.3
Q ss_pred HHHHhhhhCCCCceEEccCcchhHHHHHhhhccCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcch-hh
Q psy15960 75 AIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDS-AF 153 (177)
Q Consensus 75 ~~~~l~~~l~~~~iiv~dg~~~~~~~~~~~~~~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDG-sf 153 (177)
+++.|.+ ..=+.|+..=|++...+...+......-+++....-.+-+ -+|.|.+-+ .+++.+|++==| |.
T Consensus 17 l~~~L~~-~GV~~vfg~PG~~~~~l~dal~~~~~~i~~i~~~hE~~Aa---~aA~GyAr~-----tg~~gv~~~TsGpG~ 87 (603)
T 4feg_A 17 VIKVLEA-WGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGA---MAAAADAKL-----TGKIGVCFGSAGPGG 87 (603)
T ss_dssp HHHHHHH-TTCCEEEECCCGGGHHHHHHHHHTTTTSEEEECSSHHHHH---HHHHHHHHH-----HSSCEEEEECTTHHH
T ss_pred HHHHHHH-CCCCEEEEeCCCchHHHHHHHHhccCCCeEEEecChHHHH---HHHHHHHHH-----hCCceEEEecCCchH
Confidence 4444433 2334455444655543332212211123454433323222 245554443 355666665333 23
Q ss_pred cccHHHHHHHHHcCCCcEEEEE
Q psy15960 154 GFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 154 ~m~~qEL~Ta~r~~lpviiiVl 175 (177)
.-.+..+.+|...++|+++|+-
T Consensus 88 ~N~~~gia~A~~~~vPvl~itG 109 (603)
T 4feg_A 88 THLMNGLYDAREDHVPVLALIG 109 (603)
T ss_dssp HTTHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEec
Confidence 3446788888888899888763
No 70
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=24.44 E-value=1.1e+02 Score=21.28 Aligned_cols=13 Identities=23% Similarity=0.207 Sum_probs=8.0
Q ss_pred CCeEEEEEcchhh
Q psy15960 141 GKRVVCVQGDSAF 153 (177)
Q Consensus 141 ~r~vv~i~GDGsf 153 (177)
+.|++++.|+-.-
T Consensus 151 ~~p~l~i~g~~D~ 163 (210)
T 1imj_A 151 KTPALIVYGDQDP 163 (210)
T ss_dssp CSCEEEEEETTCH
T ss_pred CCCEEEEEcCccc
Confidence 4566666666555
No 71
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=23.24 E-value=1.7e+02 Score=26.12 Aligned_cols=47 Identities=6% Similarity=-0.176 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEE
Q psy15960 124 GLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 124 ~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVl 175 (177)
.++.|.|+++. ..-+|++....=.+-.|..+ +..+...++|+++++.
T Consensus 409 ~~~~a~GlA~~----Gg~~P~~~t~~~F~~~~~~a-ir~~a~~~lpvv~~~t 455 (651)
T 2e6k_A 409 MGAILNGLNLH----GGYRAYGGTFLVFSDYMRPA-IRLAALMGVPTVFVFT 455 (651)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGGGGSHHH-HHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHHHc----CCCEEEEEeHHHHHHHHHHH-HHHHHhcCCCEEEEEE
Confidence 34567777775 33567777664443333333 6667888999988764
No 72
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=23.21 E-value=2.4e+02 Score=21.25 Aligned_cols=28 Identities=21% Similarity=0.108 Sum_probs=20.1
Q ss_pred CCCCCHHHHHHHhhh-hCCCCceEEccCc
Q psy15960 67 SVPLNYYAAIHAVQV-SIPDNCIIVGEGA 94 (177)
Q Consensus 67 ~~~l~~~~~~~~l~~-~l~~~~iiv~dg~ 94 (177)
...+....+.+.+.+ .-.+-++++.||.
T Consensus 91 ~~~i~~~~i~~~~~~~l~~~~D~vlIEga 119 (228)
T 3of5_A 91 KVDISIENLKQFIEDKYNQDLDILFIEGA 119 (228)
T ss_dssp TCCCCHHHHHHHHHGGGGSSCSEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHccCCEEEEECC
Confidence 335778888888887 5566788888843
No 73
>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...
Probab=23.12 E-value=58 Score=28.24 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=22.2
Q ss_pred HHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHH
Q psy15960 127 FALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLV 164 (177)
Q Consensus 127 aAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~ 164 (177)
.++-+++.. .+-|-||+|+||| |+++.+..+.
T Consensus 31 ~~~~~~~~~---~~aKNVIlfIGDG---Mg~~~vtaaR 62 (449)
T 3tg0_A 31 AALRDSLSD---KPAKNIILLIGDG---MGDSEITAAR 62 (449)
T ss_dssp HHHHHTCCC---SCCSEEEEEEETT---CCHHHHHHHH
T ss_pred HHHhhhhhc---CCCCeEEEEEeCC---CCHHHHHHHH
Confidence 455444432 3567899999999 8877776665
No 74
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=22.44 E-value=2.4e+02 Score=22.72 Aligned_cols=94 Identities=13% Similarity=0.042 Sum_probs=45.6
Q ss_pred HHHHHHHh-hhhCC-CCceEEcc-CcchhHHHHHhhhccCCCceecC-CCcccccchHHHHHHHHHHhhhcCCCCeEEEE
Q psy15960 72 YYAAIHAV-QVSIP-DNCIIVGE-GANTMDIGRSLLLNNLPRHRLDA-GTFGTMGVGLGFALAAALYCNHYAPGKRVVCV 147 (177)
Q Consensus 72 ~~~~~~~l-~~~l~-~~~iiv~d-g~~~~~~~~~~~~~~~p~~~i~~-~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i 147 (177)
...+-+++ .+++. ...++++. |+.........+.+..+...+.+ ..|.+ + ...+... +..++.+
T Consensus 38 ~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~--~----~~~~~~~------G~~~~~v 105 (377)
T 3ju7_A 38 NQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPA--T----PLAAIWC------GLEPYFI 105 (377)
T ss_dssp HHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTH--H----HHHHHHT------TCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHH--H----HHHHHHc------CCEEEEE
Confidence 35667777 77777 66666555 54444333222223334445443 22222 1 1111221 2334444
Q ss_pred Ecc-hhhcccHHHHHHHH-HcCCCcEEEEEeC
Q psy15960 148 QGD-SAFGFSGMELETLV-RYRLPVILVILYN 177 (177)
Q Consensus 148 ~GD-Gsf~m~~qEL~Ta~-r~~lpviiiVlNN 177 (177)
--| ..+.+...+|..++ +.+-+...|+.+|
T Consensus 106 ~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~~ 137 (377)
T 3ju7_A 106 DISIDDWYMDKTVLWDKIEELKEEVAIVVPYA 137 (377)
T ss_dssp CBCTTTCSBCHHHHHHHHHHHGGGEEEECCBC
T ss_pred ecCCccCCcCHHHHHHHHhcCCCCceEEEEEC
Confidence 334 56788888888876 4441133444443
No 75
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=22.08 E-value=1.1e+02 Score=27.66 Aligned_cols=46 Identities=13% Similarity=-0.125 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhhcC-CCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEE
Q psy15960 125 LGFALAAALYCNHYA-PGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 125 lpaAiGaala~~~~~-p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVl 175 (177)
++.|.|+++. . +-+|++.+..+.+..|.- .+..+...++|+++++.
T Consensus 427 v~~a~GlA~~----G~~~~P~~~t~~~F~~~~~~-~ir~~a~~~lpvv~~~t 473 (675)
T 1itz_A 427 GAICNGIALH----SPGFVPYCATFFVFTDYMRG-AMRISALSEAGVIYVMT 473 (675)
T ss_dssp HHHHHHHHTT----CTTCEEEEEEEGGGHHHHHH-HHHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHhc----CCCCEEEEEEHHHHHHHHHH-HHHHHHhcCCCEEEEEE
Confidence 4566677664 2 257777777666543332 36667888999888763
No 76
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=21.72 E-value=2e+02 Score=25.76 Aligned_cols=62 Identities=6% Similarity=-0.186 Sum_probs=36.0
Q ss_pred cCCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEE
Q psy15960 107 NLPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 107 ~~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVl 175 (177)
..|.+++..+- .- -..++.|.|+++. ..-+|++......+..+- ..+..+...++|+++++.
T Consensus 399 ~~p~R~id~GI-aE-~~~v~~a~GlA~~----gG~~P~~~tf~~F~~~~~-~~ir~~a~~~lpvv~~~t 460 (669)
T 2r8o_A 399 DAAGNYIHYGV-RE-FGMTAIANGISLH----GGFLPYTSTFLMFVEYAR-NAVRMAALMKQRQVMVYT 460 (669)
T ss_dssp CTTCSEEECCS-CH-HHHHHHHHHHHHH----SSCEEEEEEEGGGGGTTH-HHHHHHHHTTCCCEEEEE
T ss_pred cCCCCeeecch-hH-HHHHHHHHHHHHc----CCCeEEEeehHHHHHHHH-HHHHHHHhcCCCEEEEEe
Confidence 34666664321 11 1145667777765 344677766666544332 336667889999988864
No 77
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=21.64 E-value=47 Score=27.05 Aligned_cols=59 Identities=19% Similarity=0.172 Sum_probs=33.2
Q ss_pred CCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEE-EcchhhcccHHHHHH-HH--H------cCCCcEEEEE
Q psy15960 109 PRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCV-QGDSAFGFSGMELET-LV--R------YRLPVILVIL 175 (177)
Q Consensus 109 p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i-~GDGsf~m~~qEL~T-a~--r------~~lpviiiVl 175 (177)
|.+++..+- +=-..++.|.|++++ --|+++.+ .+++. +.....|.+ ++ + .++|+++++-
T Consensus 51 p~r~~~~gi--sE~~~~~~a~G~A~~-----G~rp~~~~t~~~F~-~~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~ 119 (338)
T 1qs0_B 51 KSRVFDAPI--SESGIVGTAVGMGAY-----GLRPVVEIQFADYF-YPASDQIVSEMARLRYRSAGEFIAPLTLRMP 119 (338)
T ss_dssp TTTEEECCS--CHHHHHHHHHHHHHH-----TCEEEEECSCGGGC-GGGHHHHHTTTTTHHHHTTTSSCCCCEEEEE
T ss_pred CCcEEEccc--cHHHHHHHHHHHHhC-----CCEEEEEeccHhHH-HHHHHHHHHHHHHHhhhcCCCCCCCEEEEEe
Confidence 667764321 111246678888776 24555545 78886 444444432 32 2 3599888764
No 78
>3l0z_A Putative nicotinate-nucleotide-dimethylbenzimidaz phosphoribosyltransferase; putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; 2.65A {Methanocaldococcus jannaschii}
Probab=21.40 E-value=50 Score=27.70 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=20.6
Q ss_pred cchHHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHH
Q psy15960 122 GVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGM 158 (177)
Q Consensus 122 G~~lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~q 158 (177)
|+-+++..|+.+++.. .+.+|++ ||+|||+.-
T Consensus 214 G~eiaamaG~~LgAa~--~~~pVvL---dGG~qmtAa 245 (350)
T 3l0z_A 214 DKMMPVVAGLAISFAE--RNKPVIL---AGGTQMSAV 245 (350)
T ss_dssp CTHHHHHHHHHHHHHH--TTCCEEE---ESSHHHHHH
T ss_pred CHHHHHHHHHHHHHHh--cCCCEEE---EChHHHHHH
Confidence 4567778887776532 2234444 899999863
No 79
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=21.19 E-value=1.7e+02 Score=26.32 Aligned_cols=45 Identities=9% Similarity=-0.258 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEE
Q psy15960 125 LGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVI 174 (177)
Q Consensus 125 lpaAiGaala~~~~~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiV 174 (177)
++.|.|+++. ..-+|++.+...-+..+.- .+..+...++|+++++
T Consensus 415 ~~~a~GlA~~----GG~~P~~~~~~~F~~~~~~-~ir~~a~~~~pvv~~~ 459 (673)
T 1r9j_A 415 CAILNGLDAH----DGIIPFGGTFLNFIGYALG-AVRLAAISHHRVIYVA 459 (673)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGGGGHH-HHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHhc----CCCEEEEEehHHHHHHHHH-HHHHHHhcCCCEEEEE
Confidence 4566776664 2357777776555543333 3777888899988875
No 80
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=21.18 E-value=4e+02 Score=22.95 Aligned_cols=35 Identities=9% Similarity=-0.135 Sum_probs=20.5
Q ss_pred CCeEEEEEcch-hhcccHHHHHHHHHcCCCcEEEEE
Q psy15960 141 GKRVVCVQGDS-AFGFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 141 ~r~vv~i~GDG-sf~m~~qEL~Ta~r~~lpviiiVl 175 (177)
+|+.+|++-=| +..-.+..+.+|...++|+++|.-
T Consensus 83 gkp~v~~~TsGpG~~N~~~gv~~A~~~~vPll~itg 118 (565)
T 2nxw_A 83 STLGVAAVTYGAGAFNMVNAVAGAYAEKSPVVVISG 118 (565)
T ss_dssp TSCEEEEECTTHHHHTTHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhhCCCEEEEeC
Confidence 45555555322 233345677777777777777653
No 81
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=21.01 E-value=3.8e+02 Score=22.69 Aligned_cols=97 Identities=13% Similarity=0.029 Sum_probs=47.8
Q ss_pred HHHHHHhhhhCCC-CceEEcc-Ccchh---HHHHHhhhccCC---CceecCCC---cccccchHHHHHHHHHHh----hh
Q psy15960 73 YAAIHAVQVSIPD-NCIIVGE-GANTM---DIGRSLLLNNLP---RHRLDAGT---FGTMGVGLGFALAAALYC----NH 137 (177)
Q Consensus 73 ~~~~~~l~~~l~~-~~iiv~d-g~~~~---~~~~~~~~~~~p---~~~i~~~~---~gsmG~~lpaAiGaala~----~~ 137 (177)
+++.++|.+.+.+ .+|-..| |++.. |+..+|-..... ..+++.-. .||.|..-..+.|+..+. +.
T Consensus 126 r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~ 205 (421)
T 2yfq_A 126 RGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKR 205 (421)
T ss_dssp HHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHh
Confidence 4567788888854 4566678 66543 222222111111 12333211 245554334444443332 21
Q ss_pred c--CCCCeEEEEEcchhhcccHHHHHHHHHcCCCcE
Q psy15960 138 Y--APGKRVVCVQGDSAFGFSGMELETLVRYRLPVI 171 (177)
Q Consensus 138 ~--~p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpvi 171 (177)
. ..+...|++.|.|......-++ +.+++..++
T Consensus 206 ~g~~l~g~~vaVqG~GnVG~~~a~~--L~~~GakvV 239 (421)
T 2yfq_A 206 FGIKMEDAKIAVQGFGNVGTFTVKN--IERQGGKVC 239 (421)
T ss_dssp TTCCGGGSCEEEECCSHHHHHHHHH--HHHTTCCEE
T ss_pred cCCCccCCEEEEECcCHHHHHHHHH--HHHCCCEEE
Confidence 1 1234567899999875544333 345666654
No 82
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=20.94 E-value=1e+02 Score=23.50 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=25.7
Q ss_pred CCCeEEEEEcchhhcccHHHHHHHHHcCCCcEEEEE
Q psy15960 140 PGKRVVCVQGDSAFGFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 140 p~r~vv~i~GDGsf~m~~qEL~Ta~r~~lpviiiVl 175 (177)
+++.|.+-.-||-...+..-|..+.++++|.++||.
T Consensus 31 ~~k~VaLTFDDGp~~~~~~il~iL~~~~v~ATfFv~ 66 (230)
T 2y8u_A 31 TPNTIALTFDDGPSEYTPQLLDLLSRYSARATFFVL 66 (230)
T ss_dssp STTEEEEEEESCCCTTHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEEecCCchhhHHHHHHHHHHcCCCEEEEEe
Confidence 344444445566555667788889999999999985
No 83
>2g5g_X Putative lipoprotein; cofacial heme, tyrosine ligand, dimer, transport protein; HET: HEM; 1.90A {Campylobacter jejuni subsp} SCOP: c.150.1.1
Probab=20.42 E-value=1.2e+02 Score=24.13 Aligned_cols=37 Identities=11% Similarity=0.027 Sum_probs=24.9
Q ss_pred CCCCeEEEEEcchhhcccHHHHHHHHHc--CCCcEEEEE
Q psy15960 139 APGKRVVCVQGDSAFGFSGMELETLVRY--RLPVILVIL 175 (177)
Q Consensus 139 ~p~r~vv~i~GDGsf~m~~qEL~Ta~r~--~lpviiiVl 175 (177)
.++++||+|+|-|.......--.-..+. ++.+++|.+
T Consensus 210 ~~~~~vv~iaG~gH~~~~~Gvp~~l~~~~p~~~~~vi~~ 248 (268)
T 2g5g_X 210 HHVNKVLLLAGSYHTSKKIGIPLHIQDFKSSKKIVVVNL 248 (268)
T ss_dssp HCSSEEEEEEEHHHHCTTTSHHHHHHHTTCCSCEEEEEE
T ss_pred hCCCeEEEEeCcchhcCCCcHHHHHHHhCCCCceEEEEc
Confidence 4678999999999988765544445554 345555543
No 84
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=20.10 E-value=4.3e+02 Score=22.89 Aligned_cols=92 Identities=8% Similarity=-0.016 Sum_probs=46.5
Q ss_pred HHHHHhhhhCCCCceEEccCcchhHHHHHhhhcc-CCCceecCCCcccccchHHHHHHHHHHhhhcCCCCeEEEEEcch-
Q psy15960 74 AAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNN-LPRHRLDAGTFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDS- 151 (177)
Q Consensus 74 ~~~~~l~~~l~~~~iiv~dg~~~~~~~~~~~~~~-~p~~~i~~~~~gsmG~~lpaAiGaala~~~~~p~r~vv~i~GDG- 151 (177)
.+++.|.+. .=+.|+..=|+....+... +.-. ..-+++....-.+- .-+|.|.+-+ .+|+.+|++-=|
T Consensus 9 ~l~~~L~~~-GV~~vfg~PG~~~~~l~~a-l~~~~~~i~~v~~~hE~~A---a~~A~GyAr~-----tg~p~v~~~TsGp 78 (589)
T 2pgn_A 9 LIVEALEEY-GTEQVVGFIGHTSHFVADA-FSKSHLGKRVINPATELGG---AWMVNGYNYV-----KDRSAAVGAWHCV 78 (589)
T ss_dssp HHHHHHHHT-TCCEEEEECSGGGHHHHHH-HHTSTTSTTCBCCSSHHHH---HHHHHHHHHH-----HTSCCEEEEEEGG
T ss_pred HHHHHHHHc-CCCEEEEecCCchHHHHHH-HHhcCCCCeEEEeCcHHHH---HHHHHHHHHH-----HCCCEEEEEecCc
Confidence 344444432 3344554446655444332 2211 12344433332322 2356665444 345555554222
Q ss_pred hhcccHHHHHHHHHcCCCcEEEEE
Q psy15960 152 AFGFSGMELETLVRYRLPVILVIL 175 (177)
Q Consensus 152 sf~m~~qEL~Ta~r~~lpviiiVl 175 (177)
+..-.+..+.+|...++|+++|.-
T Consensus 79 G~~N~~~gv~~A~~~~vPll~itg 102 (589)
T 2pgn_A 79 GNLLLHAAMQEARTGRIPAVHIGL 102 (589)
T ss_dssp GGGGCHHHHHHHHHTTCCEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCEEEEec
Confidence 344457799999999999988864
Done!