BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15967
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24278|CNG_DROME Cyclic nucleotide-gated cation channel OS=Drosophila melanogaster
GN=Cng PE=2 SV=2
Length = 665
Score = 243 bits (621), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 146/212 (68%), Gaps = 46/212 (21%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYICRKGDVGKEMYIVKRGKL+VV DD TVLATL AGSVFGE
Sbjct: 449 VFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGE------------ 496
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
VSVLEIAGNRTGNRRTANVRSLGYSD
Sbjct: 497 ----------------------------------VSVLEIAGNRTGNRRTANVRSLGYSD 522
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCLAKRDLWETL+DYPEAR +L +RGCQLLRKDGLLDE+ F +SQ H++++ + +L+
Sbjct: 523 LFCLAKRDLWETLSDYPEARSTLTQRGCQLLRKDGLLDEQIFADSQRVHDSIEGGIEKLE 582
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
++E+L R ARL+AEY + QAK+KQRLA LE
Sbjct: 583 LSVENLNMRLARLLAEYTASQAKIKQRLAKLE 614
>sp|Q90805|CNG1_CHICK Cyclic nucleotide-gated channel cone photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 735
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 47/212 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYIC+KGD+G+EMYI+K GKL VVADD T LS GS FGE+
Sbjct: 544 VFSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEI----------- 592
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G+++GNRRTAN+RS+GYSD
Sbjct: 593 -----------------------------------SILNIKGSKSGNRRTANIRSIGYSD 617
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YPEA+ +L E+G Q+L KD L+DEEA + + + + L++ + RL+
Sbjct: 618 LFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEEAAK-AGADPKDLEEKIDRLE 676
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
T L+ LQTRFARL+AEY S Q K+KQRLA +E
Sbjct: 677 TALDTLQTRFARLLAEYSSSQQKVKQRLARVE 708
>sp|Q16281|CNGA3_HUMAN Cyclic nucleotide-gated cation channel alpha-3 OS=Homo sapiens
GN=CNGA3 PE=1 SV=2
Length = 694
Score = 184 bits (467), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 129/212 (60%), Gaps = 47/212 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYIC+KGD+GKEMYI+ GKL VVADD T LS GS FGE+
Sbjct: 502 VFSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFVVLSDGSYFGEI----------- 550
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G+++GNRRTAN+RS+GYSD
Sbjct: 551 -----------------------------------SILNIKGSKSGNRRTANIRSIGYSD 575
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YPEA+ +L E+G Q+L KD L+DEE R + + + L++ V +L
Sbjct: 576 LFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAR-AGADPKDLEEKVEQLG 634
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
++L+ LQTRFARL+AEY + Q KMKQRL+ LE
Sbjct: 635 SSLDTLQTRFARLLAEYNATQMKMKQRLSQLE 666
>sp|Q03041|CNGA2_BOVIN Cyclic nucleotide-gated olfactory channel OS=Bos taurus GN=CNGA2
PE=1 SV=1
Length = 663
Score = 182 bits (461), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 134/235 (57%), Gaps = 50/235 (21%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYICRKGD+GKEMYI+K GKL VVADD T A LSAGS FGE+
Sbjct: 474 VFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEI----------- 522
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN+RSLGYSD
Sbjct: 523 -----------------------------------SILNIKGSKMGNRRTANIRSLGYSD 547
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDE-EAFRNSQVEHEALKDTVRRL 193
LFCL+K DL E + +YP+A+ L ERG ++L K+GLLDE E + +V+ +++ + +L
Sbjct: 548 LFCLSKDDLMEAVTEYPDAKRVLEERGREILMKEGLLDENEVAASMEVD---VQEKLEQL 604
Query: 194 DTTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQATSSKRNSQAEPTHP 248
+T ++ L TRFARL+AEY Q K+KQR+ +LE N S + P P
Sbjct: 605 ETNMDTLYTRFARLLAEYTGAQQKLKQRITVLETKMKQNNEDDSLSDGMNSPEPP 659
>sp|Q62398|CNGA2_MOUSE Cyclic nucleotide-gated olfactory channel OS=Mus musculus GN=Cnga2
PE=2 SV=2
Length = 664
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 130/220 (59%), Gaps = 50/220 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYICRKGD+GKEMYI+K GKL VVADD T A LSAGS FGE+
Sbjct: 476 VFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEI----------- 524
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN+RSLGYSD
Sbjct: 525 -----------------------------------SILNIKGSKMGNRRTANIRSLGYSD 549
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDE-EAFRNSQVEHEALKDTVRRL 193
LFCL+K DL E + +YP+A+ L ERG ++L K+GLLDE E + +V+ +++ + +L
Sbjct: 550 LFCLSKDDLMEAVTEYPDAKKVLEERGREILMKEGLLDENEVAASMEVD---VQEKLEQL 606
Query: 194 DTTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQ 233
+T +E L TRFARL+AEY Q K+KQR+ +LE N
Sbjct: 607 ETNMETLYTRFARLLAEYTGAQQKLKQRITVLETKMKQNH 646
>sp|Q00195|CNGA2_RAT Cyclic nucleotide-gated olfactory channel OS=Rattus norvegicus
GN=Cnga2 PE=2 SV=1
Length = 664
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 52/238 (21%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYICRKGD+GKEMYI+K GKL VVADD T A LSAGS FGE+
Sbjct: 476 VFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEI----------- 524
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN+RSLGYSD
Sbjct: 525 -----------------------------------SILNIKGSKMGNRRTANIRSLGYSD 549
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDE-EAFRNSQVEHEALKDTVRRL 193
LFCL+K DL E + +YP+A+ L ERG ++L K+GLLDE E + +V+ +++ + +L
Sbjct: 550 LFCLSKDDLMEAVTEYPDAKKVLEERGREILMKEGLLDENEVAASMEVD---VQEKLEQL 606
Query: 194 DTTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQATS--SKRNSQAEPTHPE 249
+T ++ L TRFARL+AEY Q K+KQR+ +LE N S + EPT E
Sbjct: 607 ETNMDTLYTRFARLLAEYTGAQQKLKQRITVLETKMKQNHEDDYLSDGINTPEPTAAE 664
>sp|Q28718|CNGA2_RABIT Cyclic nucleotide-gated olfactory channel OS=Oryctolagus cuniculus
GN=CNGA2 PE=2 SV=1
Length = 664
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 129/213 (60%), Gaps = 50/213 (23%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYICRKGD+GKEMYI+K GKL VVADD T A LSAGS FGE+
Sbjct: 474 VFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEI----------- 522
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN+RSLGYSD
Sbjct: 523 -----------------------------------SILNIKGSKMGNRRTANIRSLGYSD 547
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDE-EAFRNSQVEHEALKDTVRRL 193
LFCL+K DL E + +YP+A+ L ERG ++L K+GLLDE E + +V+ +++ +++L
Sbjct: 548 LFCLSKDDLMEAVTEYPDAKKVLEERGREILMKEGLLDENEVAASMEVD---VQEKLKQL 604
Query: 194 DTTLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
+T +E L TRF RL+AEY Q K+KQR+ +LE
Sbjct: 605 ETNMETLYTRFGRLLAEYTGAQQKLKQRITVLE 637
>sp|Q29441|CNGA3_BOVIN Cyclic nucleotide-gated cation channel alpha-3 OS=Bos taurus
GN=CNGA3 PE=2 SV=1
Length = 706
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 128/212 (60%), Gaps = 47/212 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYIC+KGD+G+EMYI+K GKL VVA+D T L GS FGE+
Sbjct: 521 VFSPGDYICKKGDIGREMYIIKEGKLAVVAEDGITQFVVLGDGSYFGEI----------- 569
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G+++GNRRTAN+RS+GYSD
Sbjct: 570 -----------------------------------SILNIKGSKSGNRRTANIRSIGYSD 594
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YPEA+ +L E+G Q+L KD L+DEE + + + +++ V L+
Sbjct: 595 LFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEE-LAKAGADPKDIEEKVEHLE 653
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
T+L+ LQTRFARL+AEY + Q K+KQRL+ LE
Sbjct: 654 TSLDSLQTRFARLLAEYNATQMKVKQRLSQLE 685
>sp|Q9JJZ8|CNGA3_MOUSE Cyclic nucleotide-gated cation channel alpha-3 OS=Mus musculus
GN=Cnga3 PE=1 SV=2
Length = 631
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 47/212 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYIC+KGD+G+EMYI+K GKL VVADD T LS GS FGE+
Sbjct: 443 VFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEI----------- 491
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G+++GNRRTAN+RS+GYSD
Sbjct: 492 -----------------------------------SILNIKGSKSGNRRTANIRSIGYSD 516
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YP+A+ +L E+G Q+L KD L+DE+ ++V+ +++ V L+
Sbjct: 517 LFCLSKDDLMEALTEYPDAKRALEEKGRQILMKDNLIDEDLV-AARVDTRDVEEKVEYLE 575
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
++L+ LQTRFARL+AEY + Q K+KQRL LE
Sbjct: 576 SSLDILQTRFARLLAEYSASQMKLKQRLTRLE 607
>sp|Q16280|CNGA2_HUMAN Cyclic nucleotide-gated olfactory channel OS=Homo sapiens GN=CNGA2
PE=2 SV=2
Length = 664
Score = 177 bits (449), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 125/219 (57%), Gaps = 48/219 (21%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGDYICRKGD+GKEMYI+K GKL VVADD T A LSAGS FGE+
Sbjct: 474 VFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEI----------- 522
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN+RSLGYSD
Sbjct: 523 -----------------------------------SILNIKGSKMGNRRTANIRSLGYSD 547
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E + +YP+A+ L ERG ++L K+GLLDE S +++ + +L+
Sbjct: 548 LFCLSKDDLMEAVTEYPDAKKVLEERGREILMKEGLLDENEVATSM--EVDVQEKLGQLE 605
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQ 233
T +E L TRF RL+AEY Q K+KQR+ +LE N
Sbjct: 606 TNMETLYTRFGRLLAEYTGAQQKLKQRITVLETKMKQNN 644
>sp|Q00194|CNGA1_BOVIN cGMP-gated cation channel alpha-1 OS=Bos taurus GN=CNGA1 PE=1 SV=1
Length = 690
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 128/213 (60%), Gaps = 47/213 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
V+SPGDYIC+KGD+G+EMYI+K GKL VVADD T LS GS FGE+
Sbjct: 497 VYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEI----------- 545
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN++S+GYSD
Sbjct: 546 -----------------------------------SILNIKGSKAGNRRTANIKSIGYSD 570
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YP+A+ L E+G Q+L KDGLLD N+ + + L++ V R++
Sbjct: 571 LFCLSKDDLMEALTEYPDAKGMLEEKGKQILMKDGLLDIN-IANAGSDPKDLEEKVTRME 629
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQ 227
++++ LQTRFAR++AEY S Q K+KQRL +E+
Sbjct: 630 SSVDLLQTRFARILAEYESMQQKLKQRLTKVEK 662
>sp|P29973|CNGA1_HUMAN cGMP-gated cation channel alpha-1 OS=Homo sapiens GN=CNGA1 PE=1
SV=3
Length = 690
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 127/213 (59%), Gaps = 47/213 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
V+SPGDYIC+KGD+G+EMYI+K GKL VVADD T LS GS FGE+
Sbjct: 499 VYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEI----------- 547
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN++S+GYSD
Sbjct: 548 -----------------------------------SILNIKGSKAGNRRTANIKSIGYSD 572
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YP+A+ L E+G Q+L KDGLLD N+ + + L++ V R++
Sbjct: 573 LFCLSKDDLMEALTEYPDAKTMLEEKGKQILMKDGLLDLN-IANAGSDPKDLEEKVTRME 631
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQ 227
+++ LQTRFAR++AEY S Q K+KQRL +E+
Sbjct: 632 GSVDLLQTRFARILAEYESMQQKLKQRLTKVEK 664
>sp|P55934|CNG_ICTPU Cyclic nucleotide-gated cation channel OS=Ictalurus punctatus PE=2
SV=1
Length = 682
Score = 174 bits (442), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 132/238 (55%), Gaps = 52/238 (21%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
V+SPGDYICRKGD+GKEMYI+K G+L VVADD T A L+AG FGE+
Sbjct: 467 VYSPGDYICRKGDIGKEMYIIKEGQLAVVADDGVTQFALLTAGGCFGEI----------- 515
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN+RS+GYSD
Sbjct: 516 -----------------------------------SILNIQGSKMGNRRTANIRSIGYSD 540
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E +A+YP+A+ L ERG ++LRK GLLDE + ++ V RLD
Sbjct: 541 LFCLSKDDLMEAVAEYPDAQKVLEERGREILRKQGLLDESVAAGGLGVIDT-EEKVERLD 599
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQ-----GASVNQATSSKRNSQAEPTH 247
+L+ LQTRFARL+ E+ S Q ++KQR+ LE+ G + ++ PTH
Sbjct: 600 ASLDILQTRFARLLGEFTSTQRRLKQRITALERQLCHTGLGLLSDNEAEGEHAGVPTH 657
>sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis familiaris GN=CNGA1 PE=2
SV=1
Length = 691
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 127/213 (59%), Gaps = 47/213 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
V+SPGDYIC+KGD+G+EMYI+K GKL VVADD T LS GS FGE+
Sbjct: 498 VYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEI----------- 546
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN++S+GYSD
Sbjct: 547 -----------------------------------SILNIKGSKAGNRRTANIKSIGYSD 571
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YP+A+ L E+G Q+L KDGLLD N+ + + L++ V R++
Sbjct: 572 LFCLSKDDLMEALTEYPDAKTMLEEKGKQILMKDGLLDIN-IANAGSDPKDLEEKVTRME 630
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQ 227
+++ LQTRFAR++AEY S Q K+KQRL +E+
Sbjct: 631 GSVDLLQTRFARILAEYESMQQKLKQRLTKVER 663
>sp|Q90980|CNG3_CHICK Cyclic nucleotide-gated channel rod photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 645
Score = 174 bits (440), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 126/213 (59%), Gaps = 47/213 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
V+SPGDYICRKGD+G+EMYI+K GKL VVADD T LS GS FGE+
Sbjct: 451 VYSPGDYICRKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEI----------- 499
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN+RS+GYSD
Sbjct: 500 -----------------------------------SILNIKGSKAGNRRTANIRSIGYSD 524
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YP+A+ L E+G Q+L KDGLLD E N + + L++ V ++
Sbjct: 525 LFCLSKDDLMEALTEYPDAKAMLEEKGKQILMKDGLLDIEV-ANLGSDPKDLEEKVAYME 583
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQ 227
+++ LQT+FARL+AEY + Q K+K+RL +E+
Sbjct: 584 GSMDRLQTKFARLLAEYDAAQQKLKKRLTQIEK 616
>sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2
SV=2
Length = 684
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 126/213 (59%), Gaps = 47/213 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
V+SPGDYIC+KGD+G+EMYI+K GKL VVADD T LS GS FGE+
Sbjct: 491 VYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEI----------- 539
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN++S+GYSD
Sbjct: 540 -----------------------------------SILNIKGSKAGNRRTANIKSIGYSD 564
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YP+A+ L E+G Q+L KDGLLD N + + L++ V R++
Sbjct: 565 LFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGLLDIN-IANMGSDPKDLEEKVTRME 623
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQ 227
+++ LQTRFAR++AEY S Q K+KQRL +E+
Sbjct: 624 GSVDLLQTRFARILAEYESMQQKLKQRLTKVEK 656
>sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus norvegicus GN=Cnga1
PE=2 SV=1
Length = 683
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 126/213 (59%), Gaps = 47/213 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
V+SPGDYIC+KGD+G+EMYI+K GKL VVADD T LS GS FGE+
Sbjct: 490 VYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEI----------- 538
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L I G++ GNRRTAN++S+GYSD
Sbjct: 539 -----------------------------------SILNIKGSKAGNRRTANIKSIGYSD 563
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LFCL+K DL E L +YP+A+ L E+G Q+L KDGLLD N + + L++ V R++
Sbjct: 564 LFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGLLDIN-IANLGSDPKDLEEKVTRME 622
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQ 227
+++ LQTRFAR++AEY S Q K+KQRL +E+
Sbjct: 623 GSVDLLQTRFARILAEYESMQQKLKQRLTKVEK 655
>sp|Q03611|CNG_CAEEL Cyclic nucleotide-gated cation channel OS=Caenorhabditis elegans
GN=tax-4 PE=2 SV=3
Length = 733
Score = 170 bits (431), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 132/227 (58%), Gaps = 50/227 (22%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VFSPGD+IC+KGD+G+EMYIVKRG+L VV DD + V TL GSVFGE+
Sbjct: 513 VFSPGDFICKKGDIGREMYIVKRGRLQVVDDDGKKVFVTLQEGSVFGEL----------- 561
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
S+L IAG++ GNRRTANVRS+GY+D
Sbjct: 562 -----------------------------------SILNIAGSKNGNRRTANVRSVGYTD 586
Query: 135 LFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLD 194
LF L+K DLW L +YP+AR L+ +G ++L+KD LLDE N+ E + +++ L+
Sbjct: 587 LFVLSKTDLWNALREYPDARKLLLAKGREILKKDNLLDE----NAPEEQKTVEEIAEHLN 642
Query: 195 TTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQATSSKRNS 241
++ LQTR ARL+ E+ S + K+ +R+ +LE+ S +A + ++ +
Sbjct: 643 NAVKVLQTRMARLIVEHSSTEGKLMKRIEMLEKHLSRYKALARRQKT 689
>sp|Q8IV77|CNGA4_HUMAN Cyclic nucleotide-gated cation channel alpha-4 OS=Homo sapiens
GN=CNGA4 PE=1 SV=3
Length = 575
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 115/211 (54%), Gaps = 46/211 (21%)
Query: 16 FSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRIT 75
+SPG+Y+CRKGD+G+EMYI++ G+L VVADD T A L AG FGE+
Sbjct: 369 YSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEI------------ 416
Query: 76 SFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDL 135
S++ I GN +GNRRTAN++SLGYSDL
Sbjct: 417 ----------------------------------SIINIKGNMSGNRRTANIKSLGYSDL 442
Query: 136 FCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLDT 195
FCL+K DL E L++YP+A+ + E+G ++L K LD A EA + +R LD
Sbjct: 443 FCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDVNAEAAEIALQEATESRLRGLDQ 502
Query: 196 TLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
L+ LQT+FARL+AE S K+ R+ LE
Sbjct: 503 QLDDLQTKFARLLAELESSALKIAYRIERLE 533
>sp|Q3UW12|CNGA4_MOUSE Cyclic nucleotide-gated cation channel alpha-4 OS=Mus musculus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 115/211 (54%), Gaps = 46/211 (21%)
Query: 16 FSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRIT 75
+SPG+Y+CRKGD+G+EMYI++ G+L VVADD T A L AG FGE+
Sbjct: 369 YSPGEYVCRKGDIGREMYIIREGQLAVVADDGVTQYAVLGAGLYFGEI------------ 416
Query: 76 SFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDL 135
S++ I GN +GNRRTAN++SLGYSDL
Sbjct: 417 ----------------------------------SIINIKGNMSGNRRTANIKSLGYSDL 442
Query: 136 FCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLDT 195
FCL+K DL E L++YP+A+ + E+G ++L K LD A EA + ++ LD
Sbjct: 443 FCLSKEDLREVLSEYPQAQAVMEEKGREILLKMNKLDVNAEAAEIALQEATESRLKGLDQ 502
Query: 196 TLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
L+ LQT+FARL+AE S K+ R+ LE
Sbjct: 503 QLDDLQTKFARLLAELESSALKIAYRIERLE 533
>sp|Q64359|CNGA4_RAT Cyclic nucleotide-gated cation channel alpha-4 OS=Rattus norvegicus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 115/211 (54%), Gaps = 46/211 (21%)
Query: 16 FSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRIT 75
+SPG+Y+CRKGD+G+EMYI++ G+L VVADD T A L AG FGE+
Sbjct: 369 YSPGEYVCRKGDIGREMYIIREGQLAVVADDGVTQYAVLGAGLYFGEI------------ 416
Query: 76 SFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDL 135
S++ I GN +GNRRTAN++SLGYSDL
Sbjct: 417 ----------------------------------SIINIKGNMSGNRRTANIKSLGYSDL 442
Query: 136 FCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNSQVEHEALKDTVRRLDT 195
FCL+K DL E L++YP+A+ + E+G ++L K LD A EA + ++ LD
Sbjct: 443 FCLSKEDLREVLSEYPQAQAVMEEKGREILLKMNKLDVNAEAAEIALQEATESRLKGLDQ 502
Query: 196 TLEHLQTRFARLMAEYLSQQAKMKQRLALLE 226
L+ LQT+FARL+AE S K+ R+ LE
Sbjct: 503 QLDDLQTKFARLLAELESSALKIAYRIERLE 533
>sp|Q14028|CNGB1_HUMAN Cyclic nucleotide-gated cation channel beta-1 OS=Homo sapiens
GN=CNGB1 PE=1 SV=2
Length = 1251
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 50/163 (30%)
Query: 13 NFVFSPGDYICRKGDVGKEMYIVKRGKLNVV-ADDEETVLATLSAGSVFGEVRHVLGVDL 71
+ V+ P DY+C+KG++G+EMYI++ G++ V+ D ++VL TL AGSVFGE
Sbjct: 980 SVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGE--------- 1030
Query: 72 GRITSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLG 131
+S+L + G GNRRTANV + G
Sbjct: 1031 -------------------------------------ISLLAVGG---GNRRTANVVAHG 1050
Query: 132 YSDLFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEE 174
+++LF L K+DL E L YPE++ L ++ ++LR + EE
Sbjct: 1051 FTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRSNNKPKEE 1093
>sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel beta-1 OS=Bos taurus GN=CNGB1
PE=1 SV=1
Length = 1394
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 50/157 (31%)
Query: 13 NFVFSPGDYICRKGDVGKEMYIVKRGKLNVV-ADDEETVLATLSAGSVFGEVRHVLGVDL 71
+ V+ P DY+C+KG++G+EMYI++ G++ V+ D ++VL TL AGSVFGE
Sbjct: 1094 SVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGE--------- 1144
Query: 72 GRITSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLG 131
+S+L + G GNRRTANV + G
Sbjct: 1145 -------------------------------------ISLLAVGG---GNRRTANVVAHG 1164
Query: 132 YSDLFCLAKRDLWETLADYPEARHSLMERGCQLLRKD 168
+++LF L K+DL E L YPE++ L ++ ++LR +
Sbjct: 1165 FTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRNN 1201
>sp|Q8MJD7|CNGB3_CANFA Cyclic nucleotide-gated cation channel beta-3 OS=Canis familiaris
GN=CNGB3 PE=1 SV=1
Length = 782
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 50/154 (32%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVV-ADDEETVLATLSAGSVFGEVRHVLGVDLGR 73
V+ PGD++C+KG++GKEMYI+K+G++ V+ D VL TL AG+VFGE+ + G
Sbjct: 539 VYLPGDFVCKKGEIGKEMYIIKQGEVQVLGGSDGAQVLVTLKAGAVFGEISLLAG----- 593
Query: 74 ITSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYS 133
R GNRRTANV + G++
Sbjct: 594 --------------------------------------------RGGNRRTANVIAHGFA 609
Query: 134 DLFCLAKRDLWETLADYPEARHSLMERGCQLLRK 167
+L L K+ L E L YP++ LM++ LL+K
Sbjct: 610 NLLTLDKKTLQEILVHYPDSEKLLMKKASVLLKK 643
>sp|Q9NQW8|CNGB3_HUMAN Cyclic nucleotide-gated cation channel beta-3 OS=Homo sapiens
GN=CNGB3 PE=1 SV=2
Length = 809
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 50/154 (32%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEET-VLATLSAGSVFGEVRHVLGVDLGR 73
++ PGD++C+KG++GKEMYI+K G++ V+ + T VL TL AGSVFGE
Sbjct: 544 LYLPGDFVCKKGEIGKEMYIIKHGEVQVLGGPDGTKVLVTLKAGSVFGE----------- 592
Query: 74 ITSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYS 133
+S+L G GNRRTANV + G++
Sbjct: 593 -----------------------------------ISLLAAGG---GNRRTANVVAHGFA 614
Query: 134 DLFCLAKRDLWETLADYPEARHSLMERGCQLLRK 167
+L L K+ L E L YP++ LM++ LL++
Sbjct: 615 NLLTLDKKTLQEILVHYPDSERILMKKARVLLKQ 648
>sp|Q9JJZ9|CNGB3_MOUSE Cyclic nucleotide-gated cation channel beta-3 OS=Mus musculus
GN=Cngb3 PE=1 SV=1
Length = 694
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 50/156 (32%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVV-ADDEETVLATLSAGSVFGEVRHVLGVDLGR 73
++ PGD++C+KG++GKEMYI+K G++ V+ D VL TL AGSVFGE+
Sbjct: 536 IYLPGDFVCKKGEIGKEMYIIKHGEVQVLGGPDGAQVLVTLKAGSVFGEI---------- 585
Query: 74 ITSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYS 133
S +KG GNRRTA+V + G++
Sbjct: 586 --SLLAKG-------------------------------------GGNRRTADVVAHGFA 606
Query: 134 DLFCLAKRDLWETLADYPEARHSLMERGCQLLRKDG 169
+L L K+ L E L YP ++ LM++ LL + G
Sbjct: 607 NLLTLDKKTLQEILLHYPTSKKLLMKKAKILLSQKG 642
>sp|O60741|HCN1_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Homo sapiens GN=HCN1 PE=2
SV=3
Length = 890
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 68/277 (24%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VF PGDYI R+G VGK+MY ++ G V+ + + L+ GS FGE+
Sbjct: 495 VFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEM--KLTDGSYFGEI----------- 541
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
+KG RRTA+VR+ Y
Sbjct: 542 -CLLTKG----------------------------------------RRTASVRADTYCR 560
Query: 135 LFCLAKRDLWETLADYPEARHSL----MERGCQLLRKDGLLDEE--------AFRNSQVE 182
L+ L+ + E L +YP R + ++R ++ +K+ +L ++ F N E
Sbjct: 561 LYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQKDLNTGVFNNQ--E 618
Query: 183 HEALKDTVRRLDTTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQATSSKRNSQ 242
+E LK V+ ++ + M S + + Q V ATS ++
Sbjct: 619 NEILKQIVKHDREMVQAIAPINYPQMTTLNSTSSTTTPTSRMRTQSPPVYTATSLSHSNL 678
Query: 243 AEPTHPEDVRNSKCLLSPGFLSDGLVEDTTTSPVAPR 279
P+ +LSP + + SP+A R
Sbjct: 679 HSPSPSTQTPQPSAILSPCSYTTAVCSPPVQSPLAAR 715
>sp|Q9MZS1|HCN1_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Oryctolagus cuniculus
GN=HCN1 PE=2 SV=2
Length = 822
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 68/277 (24%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VF PGDYI R+G VGK+MY ++ G V+ + + L+ GS FGE+
Sbjct: 431 VFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEM--KLTDGSYFGEI----------- 477
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
+KG RRTA+VR+ Y
Sbjct: 478 -CLLTKG----------------------------------------RRTASVRADTYCR 496
Query: 135 LFCLAKRDLWETLADYPEARHSL----MERGCQLLRKDGLLDEE--------AFRNSQVE 182
L+ L+ + E L +YP R + ++R ++ +K+ +L ++ F N E
Sbjct: 497 LYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQKDLNTGVFNNQ--E 554
Query: 183 HEALKDTVRRLDTTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQATSSKRNSQ 242
+E LK V+ ++ + M S + + Q V ATS ++
Sbjct: 555 NEILKQIVKHDREMVQAIAPISYPQMTALNSTSSTATPTSRMRTQSPPVYTATSLSHSNL 614
Query: 243 AEPTHPEDVRNSKCLLSPGFLSDGLVEDTTTSPVAPR 279
P+ +LSP + + SP+A R
Sbjct: 615 HSPSPSTQTPQPSAILSPCSYTTAVCSPPVQSPLATR 651
>sp|O88704|HCN1_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Mus musculus GN=Hcn1 PE=1
SV=1
Length = 910
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 102/277 (36%), Gaps = 68/277 (24%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VF PGDYI R+G VGK+MY ++ G V+ + + L+ GS FGE+
Sbjct: 484 VFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEM--KLTDGSYFGEI----------- 530
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
+KG RRTA+VR+ Y
Sbjct: 531 -CLLTKG----------------------------------------RRTASVRADTYCR 549
Query: 135 LFCLAKRDLWETLADYPEARHSL----MERGCQLLRKDGLLDEE--------AFRNSQVE 182
L+ L+ + E L +YP R + ++R ++ +K+ +L ++ F N E
Sbjct: 550 LYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQKDLNTGVFNNQ--E 607
Query: 183 HEALKDTVRRLDTTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQATSSKRNSQ 242
+E LK V+ ++ + M + + Q V ATS ++
Sbjct: 608 NEILKQIVKHDREMVQAIPPINYPQMTALNCTSSTTTPTSRMRTQSPPVYTATSLSHSNL 667
Query: 243 AEPTHPEDVRNSKCLLSPGFLSDGLVEDTTTSPVAPR 279
P+ +LSP + + SP+A R
Sbjct: 668 HSPSPSTQTPQPSAILSPCSYTTAVCSPPIQSPLATR 704
>sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Rattus norvegicus GN=Hcn1
PE=2 SV=1
Length = 910
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 102/277 (36%), Gaps = 68/277 (24%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRI 74
VF PGDYI R+G VGK+MY ++ G V+ + + L+ GS FGE+
Sbjct: 484 VFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEM--KLTDGSYFGEI----------- 530
Query: 75 TSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSD 134
+KG RRTA+VR+ Y
Sbjct: 531 -CLLTKG----------------------------------------RRTASVRADTYCR 549
Query: 135 LFCLAKRDLWETLADYPEARHSL----MERGCQLLRKDGLLDEE--------AFRNSQVE 182
L+ L+ + E L +YP R + ++R ++ +K+ +L ++ F N E
Sbjct: 550 LYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQKDLNTGVFNNQ--E 607
Query: 183 HEALKDTVRRLDTTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQATSSKRNSQ 242
+E LK V+ ++ + M + + Q V ATS ++
Sbjct: 608 NEILKQIVKHDREMVQAIPPINYPQMTALNCTSSTTTPTSRMRTQSPPVYTATSLSHSNL 667
Query: 243 AEPTHPEDVRNSKCLLSPGFLSDGLVEDTTTSPVAPR 279
P+ +LSP + + SP+A R
Sbjct: 668 HSPSPSTQTPQPSAILSPCSYTTAVCSPPIQSPLATR 704
>sp|Q9UL51|HCN2_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Homo sapiens GN=HCN2 PE=1
SV=3
Length = 889
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLG 68
T L F VF PGDYI R+G +GK+MY ++ G ++V+ + + LS GS FGE+
Sbjct: 558 TKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEI----- 610
Query: 69 VDLGRITSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVR 128
L G RT A+VR
Sbjct: 611 ------------------------------------------CLLTRGRRT-----ASVR 623
Query: 129 SLGYSDLFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNS----QVEHE 184
+ Y L+ L+ + E L +YP +M R + + D LD +NS +V+H+
Sbjct: 624 ADTYCRLYSLSVDNFNEVLEEYP-----MMRRAFETVAID-RLDRIGKKNSILLHKVQHD 677
Query: 185 ALKDTVRRLDTTLEHLQTRFARLMAEYLSQQAKMKQRLALLEQGASVNQATSS 237
+ + ++ R M QQA++ QR+ L Q TS+
Sbjct: 678 LNSGVFNNQENAIIQEIVKYDREMV----QQAELGQRVGLFPPPPPPPQVTSA 726
>sp|Q9TV66|HCN4_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Oryctolagus cuniculus
GN=HCN4 PE=2 SV=1
Length = 1175
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVAD-DEETVLATLSAGSVFGEV 63
T L F VF PGDYI R+G +GK+MY ++ G ++V+ ++ET LA GS FGE+
Sbjct: 610 TKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLAD---GSYFGEI 662
>sp|Q9Y3Q4|HCN4_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Homo sapiens GN=HCN4 PE=1
SV=1
Length = 1203
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVA-DDEETVLATLSAGSVFGEV 63
T L F VF PGDYI R+G +GK+MY ++ G ++V+ ++ET LA GS FGE+
Sbjct: 609 TKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLAD---GSYFGEI 661
>sp|Q9JKA7|HCN4_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Rattus norvegicus GN=Hcn4
PE=2 SV=1
Length = 1198
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVA-DDEETVLATLSAGSVFGEV 63
T L F VF PGDYI R+G +GK+MY ++ G ++V+ ++ET LA GS FGE+
Sbjct: 609 TKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLAD---GSYFGEI 661
>sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Mus musculus GN=Hcn2 PE=1
SV=1
Length = 863
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 87/221 (39%), Gaps = 69/221 (31%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLG 68
T L F VF PGDYI R+G +GK+MY ++ G ++V+ + + LS GS FGE+
Sbjct: 531 TKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEI----- 583
Query: 69 VDLGRITSFCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVR 128
L G RT A+VR
Sbjct: 584 ------------------------------------------CLLTRGRRT-----ASVR 596
Query: 129 SLGYSDLFCLAKRDLWETLADYPEARHSLMERGCQLLRKDGLLDEEAFRNS----QVEHE 184
+ Y L+ L+ + E L +YP +M R + + D LD +NS +V+H+
Sbjct: 597 ADTYCRLYSLSVDNFNEVLEEYP-----MMRRAFETVAID-RLDRIGKKNSILLHKVQHD 650
Query: 185 ALKDTVRRLDTTLEHLQTRFARLMAEYLSQQAKMKQRLALL 225
+ + ++ R M QQA++ QR+ L
Sbjct: 651 LSSGVFNNQENAIIQEIVKYDREMV----QQAELGQRVGLF 687
>sp|O70507|HCN4_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Mus musculus GN=Hcn4 PE=1
SV=2
Length = 1186
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVA-DDEETVLATLSAGSVFGEV 63
T L F VF PGDYI R+G +GK+MY ++ G ++V+ ++ET LA GS FGE+
Sbjct: 609 TKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETRLAD---GSYFGEI 661
>sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Rattus norvegicus GN=Hcn2
PE=2 SV=3
Length = 863
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEV 63
T L F VF PGDYI R+G +GK+MY ++ G ++V+ + + LS GS FGE+
Sbjct: 531 TKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEI 583
>sp|Q9QWS8|KCNH8_RAT Potassium voltage-gated channel subfamily H member 8 OS=Rattus
norvegicus GN=Kcnh8 PE=2 SV=2
Length = 1102
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 55/143 (38%), Gaps = 52/143 (36%)
Query: 17 SPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRITS 76
+PG+Y+ R+GD + +Y V G + V+ D VLA L G + G
Sbjct: 573 APGEYLLRQGDALQAIYFVCSGSMEVLKDS--MVLAILGKGDLIGA-------------- 616
Query: 77 FCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDLF 136
NL +K Q +K A+V++L Y DL
Sbjct: 617 --------------NLSIKDQVIK----------------------TNADVKALTYCDLQ 640
Query: 137 CLAKRDLWETLADYPEARHSLME 159
C+ + L+E L YPE H +E
Sbjct: 641 CIILKGLFEVLGLYPEYAHKFVE 663
>sp|P59111|KCNH8_MOUSE Potassium voltage-gated channel subfamily H member 8 OS=Mus
musculus GN=Kcnh8 PE=2 SV=2
Length = 1102
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 55/143 (38%), Gaps = 52/143 (36%)
Query: 17 SPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRITS 76
+PG+Y+ R+GD + +Y V G + V+ D VLA L G + G
Sbjct: 573 APGEYLLRQGDALQAIYFVCSGSMEVLKDS--MVLAILGKGDLIGA-------------- 616
Query: 77 FCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDLF 136
NL +K Q +K A+V++L Y DL
Sbjct: 617 --------------NLSIKDQVIK----------------------TNADVKALTYCDLQ 640
Query: 137 CLAKRDLWETLADYPEARHSLME 159
C+ + L+E L YPE H +E
Sbjct: 641 CIILKGLFEVLGLYPEYAHKFVE 663
>sp|Q9JKA8|HCN3_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Rattus norvegicus GN=Hcn3
PE=2 SV=1
Length = 780
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEV 63
T L F VF PGD + R+G VG++MY ++ G L+V+A L+ GS FGE+
Sbjct: 441 TKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGARDT--RLTDGSYFGEI 493
>sp|Q9P1Z3|HCN3_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Homo sapiens GN=HCN3 PE=2
SV=2
Length = 774
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEV 63
T L F VF PGD + R+G VG++MY ++ G L+V+A L+ GS FGE+
Sbjct: 442 TKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGARDT--RLTDGSYFGEI 494
>sp|O88705|HCN3_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Mus musculus GN=Hcn3 PE=1
SV=1
Length = 779
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 10 TALNF-VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEV 63
T L F VF PGD + R+G VG++MY ++ G L+V+A L+ GS FGE+
Sbjct: 441 TKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGARDT--RLTDGSYFGEI 493
>sp|Q96L42|KCNH8_HUMAN Potassium voltage-gated channel subfamily H member 8 OS=Homo
sapiens GN=KCNH8 PE=2 SV=2
Length = 1107
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 55/143 (38%), Gaps = 52/143 (36%)
Query: 17 SPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRITS 76
+PG+Y+ R+GD + +Y V G + V+ D VLA L G + G
Sbjct: 573 APGEYLLRQGDALQAIYFVCSGSMEVLKD--SMVLAILGKGDLIGA-------------- 616
Query: 77 FCSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDLF 136
NL +K Q +K A+V++L Y DL
Sbjct: 617 --------------NLSIKDQVIK----------------------TNADVKALTYCDLQ 640
Query: 137 CLAKRDLWETLADYPEARHSLME 159
C+ + L+E L YPE H +E
Sbjct: 641 CIILKGLFEVLDLYPEYAHKFVE 663
>sp|Q9NS40|KCNH7_HUMAN Potassium voltage-gated channel subfamily H member 7 OS=Homo
sapiens GN=KCNH7 PE=2 SV=2
Length = 1196
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 50/135 (37%), Gaps = 52/135 (38%)
Query: 18 PGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRITSF 77
PGD + GDV +Y + RG + ++ DD V+A L +FGE+ H+
Sbjct: 768 PGDTLVHCGDVLTALYFLSRGSIEILKDD--IVVAILGKNDIFGEMVHLY---------- 815
Query: 78 CSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDLFC 137
A+P K A+VR+L Y DL
Sbjct: 816 ------------------AKPGK----------------------SNADVRALTYCDLHK 835
Query: 138 LAKRDLWETLADYPE 152
+ + DL E L YPE
Sbjct: 836 IQREDLLEVLDMYPE 850
>sp|O54852|KCNH7_RAT Potassium voltage-gated channel subfamily H member 7 OS=Rattus
norvegicus GN=Kcnh7 PE=1 SV=1
Length = 1195
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 50/135 (37%), Gaps = 52/135 (38%)
Query: 18 PGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRITSF 77
PGD + GDV +Y + RG + ++ DD V+A L +FGE+ H+
Sbjct: 768 PGDTLVHCGDVLTALYFLSRGSIEILKDD--IVVAILGKNDIFGEMVHLY---------- 815
Query: 78 CSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDLFC 137
A+P K A+VR+L Y DL
Sbjct: 816 ------------------AKPGK----------------------SNADVRALTYCDLHK 835
Query: 138 LAKRDLWETLADYPE 152
+ + DL E L YPE
Sbjct: 836 IQREDLLEVLDMYPE 850
>sp|Q9ER47|KCNH7_MOUSE Potassium voltage-gated channel subfamily H member 7 OS=Mus
musculus GN=Kcnh7 PE=2 SV=2
Length = 1195
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 50/135 (37%), Gaps = 52/135 (38%)
Query: 18 PGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRITSF 77
PGD + GDV +Y + RG + ++ DD V+A L +FGE+ H+
Sbjct: 768 PGDTLVHCGDVLTALYFLSRGSIEILKDD--IVVAILGKNDIFGEMVHLY---------- 815
Query: 78 CSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDLFC 137
A+P K A+VR+L Y DL
Sbjct: 816 ------------------AKPGK----------------------SNADVRALTYCDLHK 835
Query: 138 LAKRDLWETLADYPE 152
+ + DL E L YPE
Sbjct: 836 IQREDLLEVLDMYPE 850
>sp|Q2K5E1|CNGK1_RHIEC Cyclic nucleotide-gated potassium channel RHE_CH03180 OS=Rhizobium
etli (strain CFN 42 / ATCC 51251) GN=RHE_CH03180 PE=3
SV=1
Length = 355
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 19 GDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLG 68
G ICRKG+VG +M+ + G++ V D L AG+ FGE+ + G
Sbjct: 258 GAVICRKGEVGDQMFFIVEGRVTVATPDHPV---ELGAGNFFGEMALISG 304
>sp|P31320|KAPR_BLAEM cAMP-dependent protein kinase regulatory subunit OS=Blastocladiella
emersonii GN=PKAR PE=2 SV=1
Length = 403
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 16 FSPGDYICRKGDVGKEMYIVKRGKLNVVADD---EETVLATLSAGSVFGEVRHVLGVDLG 72
++ GD + R+GDVG+ YI++ G V+ D EE L G+ FGE+ L D
Sbjct: 300 YADGDVVIRQGDVGENFYIIEAGDAEVIKIDENGEEHHFRPLHKGNYFGEL--ALLSDKP 357
Query: 73 RITSFCSKG 81
R+ + +KG
Sbjct: 358 RVATIRAKG 366
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 19 GDYICRKGDVGKEMYIVKRGKLNVVAD---DEETVLATLSAGSVFGEV 63
G+ + R+G VG Y+V+ G L+V + + + + SAG FGE+
Sbjct: 180 GEVVIRQGGVGDYFYVVETGALDVFVNRNGNGDVKVTDYSAGGSFGEL 227
>sp|Q9H252|KCNH6_HUMAN Potassium voltage-gated channel subfamily H member 6 OS=Homo
sapiens GN=KCNH6 PE=1 SV=1
Length = 994
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 52/143 (36%)
Query: 18 PGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEVRHVLGVDLGRITSF 77
PGD + GDV +Y + RG + ++ DD V+A L +FGE
Sbjct: 617 PGDTLVHLGDVLSTLYFISRGSIEILRDD--VVVAILGKNDIFGE--------------- 659
Query: 78 CSKGYEIPNTKWLNLIVKAQPMKLRKTVLNKVSVLEIAGNRTGNRRTANVRSLGYSDLFC 137
+ + AQP + +A+VR+L Y DL
Sbjct: 660 -------------PVSLHAQP----------------------GKSSADVRALTYCDLHK 684
Query: 138 LAKRDLWETLADYPEARHSLMER 160
+ + DL E L YP S +
Sbjct: 685 IQRADLLEVLDMYPAFAESFWSK 707
>sp|Q6C2X0|KAPR_YARLI cAMP-dependent protein kinase regulatory subunit OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PKAR PE=3 SV=1
Length = 375
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 15 VFSPGDYICRKGDVGKEMYIVKRGKLNVVADDEETVLATLSAGSVFGEV 63
V PG + +G+ G Y+V+ G+ V E V+ATL G FGEV
Sbjct: 281 VVEPGTAVITEGEAGDAFYLVESGEAEVTKKGESGVVATLKQGDYFGEV 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,969,566
Number of Sequences: 539616
Number of extensions: 3928213
Number of successful extensions: 11208
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 11026
Number of HSP's gapped (non-prelim): 229
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)