Query psy15968
Match_columns 250
No_of_seqs 171 out of 798
Neff 3.8
Searched_HMMs 29240
Date Fri Aug 16 17:39:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fp5_A Acyl-COA binding protei 100.0 3E-36 1E-40 240.5 10.8 104 4-107 2-105 (106)
2 3flv_A Acyl-COA-binding domain 100.0 1E-35 3.5E-40 242.1 8.4 97 3-99 21-118 (119)
3 3epy_A Acyl-COA-binding domain 100.0 3.2E-34 1.1E-38 222.1 9.8 85 4-92 2-86 (89)
4 1hbk_A ACBP, acyl-COA binding 100.0 1.3E-33 4.4E-38 217.9 10.8 85 6-92 2-86 (89)
5 2wh5_A Acyl-COA-binding domain 100.0 8.7E-34 3E-38 226.2 9.2 90 3-92 5-94 (106)
6 1st7_A ACBP, acyl-COA-binding 100.0 8.1E-34 2.8E-38 217.8 8.6 83 6-92 1-83 (86)
7 2cqu_A Peroxisomal D3,D2-enoyl 100.0 6.3E-33 2.2E-37 224.5 10.6 87 2-92 12-98 (116)
8 2cop_A Acyl-coenzyme A binding 100.0 5.8E-33 2E-37 222.1 9.8 86 3-92 5-90 (109)
9 2cb8_A Acyl-COA-binding protei 100.0 7.6E-33 2.6E-37 213.2 9.7 82 7-92 3-84 (87)
10 2lbb_A Acyl COA binding protei 100.0 5.6E-32 1.9E-36 212.7 9.0 82 8-92 12-93 (96)
11 1mix_A Talin; focal adhesion, 98.5 7.4E-07 2.5E-11 73.9 9.6 80 6-89 18-111 (206)
12 4f7g_A Talin-1; alpha-helix bu 96.1 0.037 1.3E-06 46.7 10.1 80 6-89 29-122 (222)
13 1ef1_A Moesin; membrane, FERM 95.9 0.023 8E-07 49.4 8.2 76 9-88 99-194 (294)
14 1h4r_A Merlin; FERM, neurofibr 95.9 0.027 9.1E-07 49.7 8.3 76 10-89 120-215 (314)
15 3qij_A Protein 4.1; cytoskelet 95.6 0.024 8.2E-07 50.3 6.8 78 10-92 114-203 (296)
16 3ivf_A Talin-1; FERM domain, c 95.3 0.079 2.7E-06 47.9 9.6 77 9-89 186-276 (371)
17 2i1j_A Moesin; FERM, coiled-co 93.9 0.16 5.6E-06 49.6 8.4 76 10-89 103-198 (575)
18 3au4_A Myosin-X; protein-prote 92.9 0.31 1.1E-05 46.4 8.4 80 6-89 321-447 (555)
19 4dxa_B KREV interaction trappe 91.9 0.24 8.3E-06 44.1 5.9 77 9-89 117-218 (322)
20 2al6_A Focal adhesion kinase 1 84.8 1.1 3.8E-05 40.9 5.2 65 27-92 132-222 (375)
21 3pvl_A Myosin VIIA isoform 1; 75.1 4.4 0.00015 40.2 6.2 80 9-92 373-474 (655)
22 4eku_A Protein-tyrosine kinase 64.4 11 0.00038 34.9 6.1 82 9-95 137-245 (392)
23 2j0j_A Focal adhesion kinase 1 35.9 55 0.0019 31.5 6.0 62 28-89 133-220 (656)
24 2qzg_A Conserved uncharacteriz 30.6 76 0.0026 24.7 4.9 69 66-136 3-76 (94)
25 2pyq_A Uncharacterized protein 25.8 71 0.0024 25.7 4.0 73 72-144 1-83 (114)
26 1ojh_A NBLA; degradation prote 24.0 48 0.0017 24.2 2.5 22 69-90 21-42 (65)
27 1ug7_A 2610208M17RIK protein; 22.6 1.6E+02 0.0056 24.0 5.7 68 64-136 29-117 (128)
28 2fly_A Proadrenomedullin N-20 22.3 33 0.0011 21.0 1.1 12 59-70 8-19 (26)
29 2q8v_A NBLA protein; phycobili 21.0 61 0.0021 23.5 2.5 37 55-91 11-48 (63)
30 2dod_A Transcription elongatio 20.3 1.1E+02 0.0039 22.6 4.0 43 71-115 12-57 (82)
No 1
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=100.00 E-value=3e-36 Score=240.52 Aligned_cols=104 Identities=35% Similarity=0.647 Sum_probs=99.5
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHH
Q psy15968 4 KERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYI 83 (250)
Q Consensus 4 ~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YI 83 (250)
|+++++|++|+++|++++++|+.+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||++|||++||
T Consensus 2 ~~~~~~F~~A~~~vk~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI 81 (106)
T 3fp5_A 2 HMSKAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYV 81 (106)
T ss_dssp CCCHHHHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 35699999999999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHhhhh
Q psy15968 84 DEFINIVDSTLGSDVEDMVKSLGT 107 (250)
Q Consensus 84 ellekLl~k~~t~~~~~~l~~~~~ 107 (250)
++++++++++.+++++++|..|+.
T Consensus 82 ~~v~~l~~~~~~~~~~~~~~~le~ 105 (106)
T 3fp5_A 82 EKLLEILKKADTEESKKYIAEIEA 105 (106)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHHhcccCcHHHHHHHHHHhc
Confidence 999999999999999999998763
No 2
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=242.08 Aligned_cols=97 Identities=47% Similarity=0.895 Sum_probs=89.3
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHH
Q psy15968 3 MKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRY 82 (250)
Q Consensus 3 m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~Y 82 (250)
|.+|+++|++|+++|++++.+|+++|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++|
T Consensus 21 ~~dLe~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~Y 100 (119)
T 3flv_A 21 QSMHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAY 100 (119)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 77899999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcC-CCchhHH
Q psy15968 83 IDEFINIVDS-TLGSDVE 99 (250)
Q Consensus 83 IellekLl~k-~~t~~~~ 99 (250)
|+++++|+++ +.+++++
T Consensus 101 I~~v~~l~~~~~~~~~~~ 118 (119)
T 3flv_A 101 VEEMKKIIETMPMTEKVE 118 (119)
T ss_dssp HHHHHHHHHHSCC-----
T ss_pred HHHHHHHHhhCCCCcccc
Confidence 9999999999 9999875
No 3
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=100.00 E-value=3.2e-34 Score=222.07 Aligned_cols=85 Identities=27% Similarity=0.460 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHH
Q psy15968 4 KERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYI 83 (250)
Q Consensus 4 ~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YI 83 (250)
|+|+++|++|+++|+.++. +|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||++|||++||
T Consensus 2 m~L~~~F~~A~~~vk~l~~----~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi 77 (89)
T 3epy_A 2 MALQADFDRAAEDVRKLKA----RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI 77 (89)
T ss_dssp CHHHHHHHHHHHHGGGCSS----CCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCC----CcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 4699999999999999986 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC
Q psy15968 84 DEFINIVDS 92 (250)
Q Consensus 84 ellekLl~k 92 (250)
+++++++++
T Consensus 78 ~~v~~l~~k 86 (89)
T 3epy_A 78 SKAKELIEK 86 (89)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 999999876
No 4
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=100.00 E-value=1.3e-33 Score=217.89 Aligned_cols=85 Identities=31% Similarity=0.559 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy15968 6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDE 85 (250)
Q Consensus 6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIel 85 (250)
|+++|++|+++|++++. ..+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||++||++
T Consensus 2 l~~~F~~A~~~v~~l~~--~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~~ 79 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPR--TINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVDI 79 (89)
T ss_dssp HHHHHHHHHHHHHHSCT--TCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCC--cCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 68999999999999984 2379999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC
Q psy15968 86 FINIVDS 92 (250)
Q Consensus 86 lekLl~k 92 (250)
|++++++
T Consensus 80 v~~l~~~ 86 (89)
T 1hbk_A 80 VSEIFPY 86 (89)
T ss_dssp HHHHCTT
T ss_pred HHHHccc
Confidence 9999886
No 5
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-34 Score=226.17 Aligned_cols=90 Identities=48% Similarity=0.882 Sum_probs=83.8
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHH
Q psy15968 3 MKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRY 82 (250)
Q Consensus 3 m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~Y 82 (250)
..+|+++|++|+++|++++.+|+++|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++|
T Consensus 5 ~~~l~~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Y 84 (106)
T 2wh5_A 5 EPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAY 84 (106)
T ss_dssp ----CHHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 34688999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcC
Q psy15968 83 IDEFINIVDS 92 (250)
Q Consensus 83 IellekLl~k 92 (250)
|+++++++++
T Consensus 85 I~~v~~l~~k 94 (106)
T 2wh5_A 85 ITEMKLVAQK 94 (106)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998876
No 6
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-34 Score=217.80 Aligned_cols=83 Identities=31% Similarity=0.617 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy15968 6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDE 85 (250)
Q Consensus 6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIel 85 (250)
|+++|++|+++|++++. +|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||++||++
T Consensus 1 l~~~F~~A~~~v~~l~~----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~~ 76 (86)
T 1st7_A 1 VSQLFEEKAKAVNELPT----KPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIAL 76 (86)
T ss_dssp CHHHHHHHHHHHTSCSS----CCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccC----CcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 57899999999999986 69999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC
Q psy15968 86 FINIVDS 92 (250)
Q Consensus 86 lekLl~k 92 (250)
|++++++
T Consensus 77 v~~l~~~ 83 (86)
T 1st7_A 77 VDQLIAK 83 (86)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 9999875
No 7
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.98 E-value=6.3e-33 Score=224.49 Aligned_cols=87 Identities=43% Similarity=0.762 Sum_probs=83.8
Q ss_pred CchhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHH
Q psy15968 2 KMKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQR 81 (250)
Q Consensus 2 ~m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~ 81 (250)
.|++++++|++|+++|+.++. .|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++
T Consensus 12 ~m~~~~~~F~~A~~~vk~l~~----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~~ 87 (116)
T 2cqu_A 12 AMRASQKDFENSMNQVKLLKK----DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQN 87 (116)
T ss_dssp SCCCCHHHHHHHHHHHHHCCS----CCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHccC----CCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 477789999999999999997 6899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcC
Q psy15968 82 YIDEFINIVDS 92 (250)
Q Consensus 82 YIellekLl~k 92 (250)
||++|++++++
T Consensus 88 YI~lv~~l~~~ 98 (116)
T 2cqu_A 88 YVDLVSSLSPS 98 (116)
T ss_dssp HHHHHHHHCSC
T ss_pred HHHHHHHHccc
Confidence 99999999987
No 8
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.98 E-value=5.8e-33 Score=222.09 Aligned_cols=86 Identities=36% Similarity=0.570 Sum_probs=82.8
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHH
Q psy15968 3 MKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRY 82 (250)
Q Consensus 3 m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~Y 82 (250)
+.+|+++|++|+++|+.++. +|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||++|||++|
T Consensus 5 ~~~l~~~F~~A~~~vk~l~~----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~~Y 80 (109)
T 2cop_A 5 SSGLAELFEKAAAHLQGLIQ----VASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEY 80 (109)
T ss_dssp CCCSHHHHHHHHHHHTTSTT----TSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHccc----CCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 56789999999999999986 69999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcC
Q psy15968 83 IDEFINIVDS 92 (250)
Q Consensus 83 IellekLl~k 92 (250)
|++|++++++
T Consensus 81 I~lv~~l~~~ 90 (109)
T 2cop_A 81 IAVVKKLDPG 90 (109)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHHHhhh
Confidence 9999999987
No 9
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.98 E-value=7.6e-33 Score=213.19 Aligned_cols=82 Identities=35% Similarity=0.590 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy15968 7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEF 86 (250)
Q Consensus 7 Ee~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIell 86 (250)
+++|++|+++|++++. +|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||++||+++
T Consensus 3 ~~~F~~A~~~vk~l~~----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~v 78 (87)
T 2cb8_A 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKV 78 (87)
T ss_dssp HHHHHHHHHHGGGCSS----CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccC----CcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 7899999999999986 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcC
Q psy15968 87 INIVDS 92 (250)
Q Consensus 87 ekLl~k 92 (250)
++++++
T Consensus 79 ~~l~~~ 84 (87)
T 2cb8_A 79 EELKKK 84 (87)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 10
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.97 E-value=5.6e-32 Score=212.68 Aligned_cols=82 Identities=37% Similarity=0.607 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy15968 8 RKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFI 87 (250)
Q Consensus 8 e~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIelle 87 (250)
++|++|++.|+++++ .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||++||++|+
T Consensus 12 ~~F~~A~~~vk~l~~---~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv~ 88 (96)
T 2lbb_A 12 DDFDAAVKYVSNTTT---MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLLD 88 (96)
T ss_dssp STHHHHHHHHHHCCC---SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC---CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 569999999999993 27999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcC
Q psy15968 88 NIVDS 92 (250)
Q Consensus 88 kLl~k 92 (250)
+++++
T Consensus 89 ~l~~~ 93 (96)
T 2lbb_A 89 TLAPS 93 (96)
T ss_dssp HHCGG
T ss_pred HHhch
Confidence 99886
No 11
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=98.46 E-value=7.4e-07 Score=73.88 Aligned_cols=80 Identities=24% Similarity=0.333 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcchh------------HHHHHHHHHhcC
Q psy15968 6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWDIV------------RKTKWDAWTKLG 71 (250)
Q Consensus 6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD~v------------gRaKWdAWk~Lk 71 (250)
+.--|..+...|-. |.+..+.++-++|.||..||..||++.. .|+++++. .+..+++|++++
T Consensus 18 ~~l~y~Q~~~dil~----g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~~ 93 (206)
T 1mix_A 18 LNLLYVQARDDILN----GSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCG 93 (206)
T ss_dssp HHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHC----CccccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHcc
Confidence 34456666666654 3456899999999999999999999864 46665544 677899999999
Q ss_pred CCCHHHHHHHHHHHHHHh
Q psy15968 72 DMSKEAAMQRYIDEFINI 89 (250)
Q Consensus 72 GMSkEEAm~~YIellekL 89 (250)
|||++||+.+|++++.++
T Consensus 94 g~s~~~A~~~yL~~~~~l 111 (206)
T 1mix_A 94 NMSEIEAKVRYVKLARSL 111 (206)
T ss_dssp TCCHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 999999999999999875
No 12
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=96.13 E-value=0.037 Score=46.68 Aligned_cols=80 Identities=24% Similarity=0.323 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcch------------hHHHHHHHHHhcC
Q psy15968 6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWDI------------VRKTKWDAWTKLG 71 (250)
Q Consensus 6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD~------------vgRaKWdAWk~Lk 71 (250)
+.--|..+...|-. |.+..+.++-++|=||-=||..||++.. .++++++ ..+.=.+.|++++
T Consensus 29 l~l~ylQ~~~dil~----G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~~~ 104 (222)
T 4f7g_A 29 LNLLYVQARDDILN----GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCG 104 (222)
T ss_dssp HHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhC----CcccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHhcc
Confidence 33345555555543 3456789999999999999999999853 2332221 1122257899999
Q ss_pred CCCHHHHHHHHHHHHHHh
Q psy15968 72 DMSKEAAMQRYIDEFINI 89 (250)
Q Consensus 72 GMSkEEAm~~YIellekL 89 (250)
|||++||+.+|++++.++
T Consensus 105 g~s~~eA~~~yL~~~~~l 122 (222)
T 4f7g_A 105 QMSEIEAKVRYVKLARSL 122 (222)
T ss_dssp TCCHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHhhc
Confidence 999999999999999875
No 13
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=95.95 E-value=0.023 Score=49.38 Aligned_cols=76 Identities=21% Similarity=0.263 Sum_probs=55.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcc---hh-----H-----HHHH-----HHHH
Q psy15968 9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWD---IV-----R-----KTKW-----DAWT 68 (250)
Q Consensus 9 ~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD---~v-----g-----RaKW-----dAWk 68 (250)
-|..+..-|-. |.+..+.++-++|=||--||..||++.. .|++++ +. . ...| +.|+
T Consensus 99 ~y~Q~~~dil~----g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~ 174 (294)
T 1ef1_A 99 FFLQVKEGILN----DDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHE 174 (294)
T ss_dssp HHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc----CcccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHHHHH
Confidence 34555554443 3456789999999999999999999854 344421 11 1 1233 6899
Q ss_pred hcCCCCHHHHHHHHHHHHHH
Q psy15968 69 KLGDMSKEAAMQRYIDEFIN 88 (250)
Q Consensus 69 ~LkGMSkEEAm~~YIellek 88 (250)
+++|||++||+.+|++++.+
T Consensus 175 ~~~g~s~~~A~~~yL~~~~~ 194 (294)
T 1ef1_A 175 EHRGMLREDAVLEYLKIAQD 194 (294)
T ss_dssp HTTTCCHHHHHHHHHHHHTT
T ss_pred HccCCCHHHHHHHHHHHHcc
Confidence 99999999999999999986
No 14
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=95.88 E-value=0.027 Score=49.69 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=55.0
Q ss_pred HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcc---h---------------hHHHHHHHHHh
Q psy15968 10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWD---I---------------VRKTKWDAWTK 69 (250)
Q Consensus 10 Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD---~---------------vgRaKWdAWk~ 69 (250)
|..+..-|-. |.+..+.++-++|=||--||..||++.. .|++++ + ..+.=-+.|++
T Consensus 120 y~Q~~~dil~----g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~ 195 (314)
T 1h4r_A 120 FLQVKKQILD----EKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAE 195 (314)
T ss_dssp HHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhC----CCccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHH
Confidence 4444444433 3446799999999999999999999854 344321 1 11222478999
Q ss_pred cCCCCHHHHHHHHHHHHHHh
Q psy15968 70 LGDMSKEAAMQRYIDEFINI 89 (250)
Q Consensus 70 LkGMSkEEAm~~YIellekL 89 (250)
+.|||++||+.+|++++.++
T Consensus 196 ~~g~s~~eA~~~yL~~~~~l 215 (314)
T 1h4r_A 196 HRGRARDEAEMEYLKIAQDL 215 (314)
T ss_dssp TTTCCHHHHHHHHHHHHTTS
T ss_pred cCCCCHHHHHHHHHHHHhcc
Confidence 99999999999999999773
No 15
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=95.57 E-value=0.024 Score=50.28 Aligned_cols=78 Identities=9% Similarity=0.084 Sum_probs=55.7
Q ss_pred HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcc----------hhHHHHHHHHHhcCCCCHHH
Q psy15968 10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWD----------IVRKTKWDAWTKLGDMSKEA 77 (250)
Q Consensus 10 Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD----------~vgRaKWdAWk~LkGMSkEE 77 (250)
|..+..-|-. |.+..+.++-+.|=||-=||..||++.. .|+++. -..+.=-++|++++|||++|
T Consensus 114 ylQ~~~dil~----G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~e 189 (296)
T 3qij_A 114 CLQLRQDIVA----GRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQ 189 (296)
T ss_dssp HHHHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHH
T ss_pred HHHHHHHHHc----CCCCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHH
Confidence 4444444433 3446789999999999999999999732 233221 12233357899999999999
Q ss_pred HHHHHHHHHHHhhcC
Q psy15968 78 AMQRYIDEFINIVDS 92 (250)
Q Consensus 78 Am~~YIellekLl~k 92 (250)
|+.+|++++.+ ++.
T Consensus 190 A~~~yL~~a~~-l~~ 203 (296)
T 3qij_A 190 ADLEFLENAKK-LSM 203 (296)
T ss_dssp HHHHHHHHHTT-STT
T ss_pred HHHHHHHHHhc-ccc
Confidence 99999999988 444
No 16
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=95.35 E-value=0.079 Score=47.91 Aligned_cols=77 Identities=25% Similarity=0.350 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCC--CCCcc---h--------h-HHHHHHHHHhcCCCC
Q psy15968 9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPK--PAFWD---I--------V-RKTKWDAWTKLGDMS 74 (250)
Q Consensus 9 ~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~r--Pg~fD---~--------v-gRaKWdAWk~LkGMS 74 (250)
-|..+..-|-. |.+..+.++-++|=||.=||..||++... +++++ + . .+.=-++|++++|||
T Consensus 186 ~y~Q~~~dil~----G~~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~g~s 261 (371)
T 3ivf_A 186 LYVQARDDILN----GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMS 261 (371)
T ss_dssp HHHHHHHHHHT----SSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTTTCC
T ss_pred HHHHhhHHHhC----ceeecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHccCCC
Confidence 34555554443 44567899999999999999999998542 33221 1 1 222357899999999
Q ss_pred HHHHHHHHHHHHHHh
Q psy15968 75 KEAAMQRYIDEFINI 89 (250)
Q Consensus 75 kEEAm~~YIellekL 89 (250)
++||+.+|++++.++
T Consensus 262 ~~eA~~~yL~~~~~l 276 (371)
T 3ivf_A 262 EIEAKVRYVKLARSL 276 (371)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999874
No 17
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=93.86 E-value=0.16 Score=49.59 Aligned_cols=76 Identities=22% Similarity=0.432 Sum_probs=55.6
Q ss_pred HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCc---chhH----------HHHH-----HHHHh
Q psy15968 10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFW---DIVR----------KTKW-----DAWTK 69 (250)
Q Consensus 10 Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~f---D~vg----------RaKW-----dAWk~ 69 (250)
|..+..-|-. |.+..+.++-+.|=||--||..||++.. .|+++ .++- ...| ..|++
T Consensus 103 YlQvk~dIl~----G~l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~ 178 (575)
T 2i1j_A 103 YLQVKNAILS----DEIYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQE 178 (575)
T ss_dssp HHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhC----CCCCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHH
Confidence 4444444433 4456789999999999999999999854 34443 1111 1234 67999
Q ss_pred cCCCCHHHHHHHHHHHHHHh
Q psy15968 70 LGDMSKEAAMQRYIDEFINI 89 (250)
Q Consensus 70 LkGMSkEEAm~~YIellekL 89 (250)
+.|||+.+|+..|++++.++
T Consensus 179 l~G~s~~eA~~~yL~~a~~l 198 (575)
T 2i1j_A 179 HRGMLREDAMMEYLKIAQDL 198 (575)
T ss_dssp GTTCCHHHHHHHHHHHHTTS
T ss_pred ccCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999874
No 18
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=92.88 E-value=0.31 Score=46.45 Aligned_cols=80 Identities=21% Similarity=0.269 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCC--CCCcch------hH-----------------
Q psy15968 6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPK--PAFWDI------VR----------------- 60 (250)
Q Consensus 6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~r--Pg~fD~------vg----------------- 60 (250)
+.--|..+..-|-. |.+..+.++-+.|=||--|+..||++... +.+-++ ..
T Consensus 321 ~~lly~Q~~~dil~----G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l~ 396 (555)
T 3au4_A 321 FAFMFEQAHEAVIH----GHHPAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSVV 396 (555)
T ss_dssp HHHHHHHHHHHHHT----TCSCCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSCC
T ss_pred HHhhHHHHHHHHHC----CCCCCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhccccccccccccccc
Confidence 33456666666654 44567899999999999999999998532 111010 00
Q ss_pred ---------HHH-------------HHHHHhcCCCCHHHHHHHHHHHHHHh
Q psy15968 61 ---------KTK-------------WDAWTKLGDMSKEAAMQRYIDEFINI 89 (250)
Q Consensus 61 ---------RaK-------------WdAWk~LkGMSkEEAm~~YIellekL 89 (250)
... .+.|++++|||++||+.+|++++.++
T Consensus 397 ~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l 447 (555)
T 3au4_A 397 RQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW 447 (555)
T ss_dssp EECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC
Confidence 112 36789999999999999999999875
No 19
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=91.85 E-value=0.24 Score=44.05 Aligned_cols=77 Identities=18% Similarity=0.243 Sum_probs=53.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCC--CCCCCcc---h---------------hHHHHHHHHH
Q psy15968 9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQ--PKPAFWD---I---------------VRKTKWDAWT 68 (250)
Q Consensus 9 ~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~--~rPg~fD---~---------------vgRaKWdAWk 68 (250)
-|..+..-|-. |.+..+.++-..|=||--||..||++. ..|++++ + ....=.++|+
T Consensus 117 ~y~Q~~~dil~----G~~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h~ 192 (322)
T 4dxa_B 117 LFDEARYNLLK----GFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYK 192 (322)
T ss_dssp HHHHHHHHHHH----TCCCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHHH
T ss_pred HHHHHHHHHHC----CcccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHHHH
Confidence 35555555544 344678999999999999999999863 2344322 1 1123367899
Q ss_pred hc---CCCCHH--HHHHHHHHHHHHh
Q psy15968 69 KL---GDMSKE--AAMQRYIDEFINI 89 (250)
Q Consensus 69 ~L---kGMSkE--EAm~~YIellekL 89 (250)
++ .|||++ +|+.+|++++.++
T Consensus 193 ~~~~~~g~s~~~a~a~~~yL~~~~~l 218 (322)
T 4dxa_B 193 NLSTSEGVSKEMHHLQRMFLQNCWEI 218 (322)
T ss_dssp HHHC--CCCCCHHHHHHHHHHHHHTS
T ss_pred hcccccCCChhHHHHHHHHHHHHhcC
Confidence 99 999975 4699999999864
No 20
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=84.75 E-value=1.1 Score=40.86 Aligned_cols=65 Identities=14% Similarity=0.265 Sum_probs=47.6
Q ss_pred CCChHHHHHHHHHhhccccCCCCCCCC----C------------Cc--ch--------hHHHHHHHHHhcCCCCHHHHHH
Q psy15968 27 QTPLNTMLQFYALYKQATEGPNNQPKP----A------------FW--DI--------VRKTKWDAWTKLGDMSKEAAMQ 80 (250)
Q Consensus 27 ~ps~d~kL~LYALYKQAT~GDcn~~rP----g------------~f--D~--------vgRaKWdAWk~LkGMSkEEAm~ 80 (250)
..+.++-+.|-+|=-|+..||++...+ . ++ ++ ..+.=...|+++.|||++|||-
T Consensus 132 ~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~g~s~~eAk~ 211 (375)
T 2al6_A 132 QVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESIL 211 (375)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChHHHHHHHHHHHHHhhCCCHHHHHH
Confidence 468999999999999999999863211 0 10 11 1111257889999999999999
Q ss_pred HHHHHHHHhhcC
Q psy15968 81 RYIDEFINIVDS 92 (250)
Q Consensus 81 ~YIellekLl~k 92 (250)
+|++++.+ ++.
T Consensus 212 ~yL~~~~~-l~~ 222 (375)
T 2al6_A 212 KFFEILSP-VYR 222 (375)
T ss_dssp HHHHHHTT-TCC
T ss_pred HHHHHHhh-ccc
Confidence 99999988 444
No 21
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=75.10 E-value=4.4 Score=40.21 Aligned_cols=80 Identities=9% Similarity=-0.057 Sum_probs=52.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCChH-HHHHHHHHhhccccCCCCCCC----------CC-Ccch-hHHHH-----HHHHHhc
Q psy15968 9 KFYAAVSIIQNLPKSGPIQTPLN-TMLQFYALYKQATEGPNNQPK----------PA-FWDI-VRKTK-----WDAWTKL 70 (250)
Q Consensus 9 ~Fe~Av~~Vk~Lp~~G~~~ps~d-~kL~LYALYKQAT~GDcn~~r----------Pg-~fD~-vgRaK-----WdAWk~L 70 (250)
-|..+..-|-. |.+..+.+ +...|=||--||..||++... |. ...- ....+ ..+|+++
T Consensus 373 lYlQ~k~dIl~----Grlpc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hkk~ 448 (655)
T 3pvl_A 373 IYQQVVRGVKF----GEYRCEKEDDLAELASQQYFVDYGSEMILERLLSLVPTYIPDREITPLKNLEKWAQLAIAAHKKG 448 (655)
T ss_dssp HHHHHHHHHHH----TSSCCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccc----CccCCChHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhCCHHHHhccCCHHHHHHHHHHHHHhh
Confidence 45556655544 33445655 999999999999999986321 21 1111 12233 3678888
Q ss_pred ----CCCCHHHHHHHHHHHHHHhhcC
Q psy15968 71 ----GDMSKEAAMQRYIDEFINIVDS 92 (250)
Q Consensus 71 ----kGMSkEEAm~~YIellekLl~k 92 (250)
+|||+++|+.+|++++.+-++.
T Consensus 449 ~~~~~g~s~~eAk~~yL~~a~~~lp~ 474 (655)
T 3pvl_A 449 IYAQRRTDSQKVKEDVVNYARFKWPL 474 (655)
T ss_dssp HHTTCSSCHHHHHHHHHHHHHHHCTT
T ss_pred hccccCCCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999433343
No 22
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=64.38 E-value=11 Score=34.95 Aligned_cols=82 Identities=7% Similarity=0.102 Sum_probs=54.5
Q ss_pred HHHHHHH-HHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCC----C---------CC---c--chhH--------H
Q psy15968 9 KFYAAVS-IIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPK----P---------AF---W--DIVR--------K 61 (250)
Q Consensus 9 ~Fe~Av~-~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~r----P---------g~---f--D~vg--------R 61 (250)
-|..+.. +++... ...+.++-++|-+|=-|+-.||++... . ++ + ++.. +
T Consensus 137 lY~Q~r~D~l~g~~----~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~ik~k~~rk 212 (392)
T 4eku_A 137 FYQQLRNDYMQRYA----SKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENLKPKQFRK 212 (392)
T ss_dssp HHHHHHHHHHHHTT----TTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHcCCC----CCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhcCHHHHHH
Confidence 4555554 444432 247899999999999999999886321 1 11 1 1111 1
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHhhcCCCc
Q psy15968 62 TKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLG 95 (250)
Q Consensus 62 aKWdAWk~LkGMSkEEAm~~YIellekLl~k~~t 95 (250)
.=....+++.|+|.++||-+|++.+.++ +..+.
T Consensus 213 ~I~~~~kk~~~ls~~eakl~YL~~l~~L-p~yG~ 245 (392)
T 4eku_A 213 MIQQTFQQYASLREEECVMKFFNTLAGF-ANIDQ 245 (392)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHTTS-SCCSC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHhh-hccCc
Confidence 1134677889999999999999999986 55443
No 23
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=35.92 E-value=55 Score=31.55 Aligned_cols=62 Identities=10% Similarity=0.207 Sum_probs=46.6
Q ss_pred CChHHHHHHHHHhhccccCCCCCCC-------------CCCcchh-------------HHHHHHHHHhcCCCCHHHHHHH
Q psy15968 28 TPLNTMLQFYALYKQATEGPNNQPK-------------PAFWDIV-------------RKTKWDAWTKLGDMSKEAAMQR 81 (250)
Q Consensus 28 ps~d~kL~LYALYKQAT~GDcn~~r-------------Pg~fD~v-------------gRaKWdAWk~LkGMSkEEAm~~ 81 (250)
.+.++-|.|-+|=-|+..||++... -|+-.++ .+.=.+.|+++.+++.++||-+
T Consensus 133 ~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~lk 212 (656)
T 2j0j_A 133 VDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILK 212 (656)
T ss_dssp SCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 5799999999999999999995330 1111111 1122788999999999999999
Q ss_pred HHHHHHHh
Q psy15968 82 YIDEFINI 89 (250)
Q Consensus 82 YIellekL 89 (250)
|++.+..+
T Consensus 213 ~l~~l~~~ 220 (656)
T 2j0j_A 213 FFEILSPV 220 (656)
T ss_dssp HHHHHGGG
T ss_pred HHHHhccc
Confidence 99988873
No 24
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=30.62 E-value=76 Score=24.70 Aligned_cols=69 Identities=10% Similarity=0.136 Sum_probs=44.3
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHhhcC-CCchhHHHHHH-hhhhhhcccccchhhhhccchh---HhhhhcCCCch
Q psy15968 66 AWTKLGDMSKEAAMQRYIDEFINIVDS-TLGSDVEDMVK-SLGTLYEAVNNEDIDLLLGPTM---DKLFARTGSKK 136 (250)
Q Consensus 66 AWk~LkGMSkEEAm~~YIellekLl~k-~~t~~~~~~l~-~~~~~ye~v~~d~lel~~~~~~---e~v~~~p~~p~ 136 (250)
|-...+.++.|+-.++-++.+++++.. +.--+.+.-.. ..+-|- =+.+++-+++...+ |.+-.+||.|.
T Consensus 3 ~~~~~~~~e~e~~ik~~~~~L~~I~~D~sVPRNIRraA~ea~~~L~--~e~~~~~vRAAtAIs~LDeISnDPNmP~ 76 (94)
T 2qzg_A 3 AMFSAKKLSPADKLKNISSMLEEIVEDTTVPRNIRAAADNAKNALH--NEEQELIVRSATAIQYLDDISEDPNMPI 76 (94)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTT--CTTSCHHHHHHHHHHHHHHHTTCTTCCH
T ss_pred cchhhhhcchHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHh--CCCcchhHHHHHHHHHHHHhhcCCCCCh
Confidence 344567889999999999999999988 44444333222 222221 12446666666554 79999999999
No 25
>2pyq_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.50A {Jannaschia SP} SCOP: a.279.1.1
Probab=25.79 E-value=71 Score=25.65 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=48.0
Q ss_pred CCCH-HHHHHHHHHHHHHhhcC-CCchhHHHHHHhhhhhhcc--------cccchhhhhccchhHhhhhcCCCchhhhhh
Q psy15968 72 DMSK-EAAMQRYIDEFINIVDS-TLGSDVEDMVKSLGTLYEA--------VNNEDIDLLLGPTMDKLFARTGSKKLAQLK 141 (250)
Q Consensus 72 GMSk-EEAm~~YIellekLl~k-~~t~~~~~~l~~~~~~ye~--------v~~d~lel~~~~~~e~v~~~p~~p~~~~~~ 141 (250)
|||+ +|=+.+|.+-+++-+.. +..+-+......++|..-+ -++.+||.|-.+++.+..--+..|-+..--
T Consensus 1 ~msk~de~ia~Y~~d~k~k~~~~~D~~ll~kv~~~lGpsiyn~Das~Vs~SD~~ELerVk~nfl~KKLGl~d~~~ld~aI 80 (114)
T 2pyq_A 1 GMGKRDDLIAQYADDLRNKCGMEPDMALLEKVTKGCGPAIYNRDASTVAGSDTAELETIKKNFLMKKLGLADSESLMGGI 80 (114)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHCSCCSCHHHHBCCTTCHHHHHHHHHHTTTTTSCCCSSHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCceeecCchhhhccCCHHHHHHHHHhHHHHHcCCCCcHhHHHHH
Confidence 5776 45579999998855655 4444566666667664322 257888888888887766666666555555
Q ss_pred hhh
Q psy15968 142 DKV 144 (250)
Q Consensus 142 ~~~ 144 (250)
.+|
T Consensus 81 ~~V 83 (114)
T 2pyq_A 81 QSV 83 (114)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
No 26
>1ojh_A NBLA; degradation protein, phycobilisome degradation, protein BIND; HET: MSE; 1.80A {Anabaena SP} SCOP: a.214.1.1
Probab=24.02 E-value=48 Score=24.18 Aligned_cols=22 Identities=18% Similarity=0.344 Sum_probs=19.2
Q ss_pred hcCCCCHHHHHHHHHHHHHHhh
Q psy15968 69 KLGDMSKEAAMQRYIDEFINIV 90 (250)
Q Consensus 69 ~LkGMSkEEAm~~YIellekLl 90 (250)
++..||+|+|+.--|++.++++
T Consensus 21 qv~~ls~EQaqe~Lve~~rQmM 42 (65)
T 1ojh_A 21 QVQNMSHDQAKDFLVKLYEQMV 42 (65)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHH
Confidence 3568999999999999998876
No 27
>1ug7_A 2610208M17RIK protein; hypothetical protein FLJ12806, four helical UP-and-DOWN bundle, structural genomics; NMR {Mus musculus} SCOP: a.24.24.1
Probab=22.60 E-value=1.6e+02 Score=23.98 Aligned_cols=68 Identities=16% Similarity=0.176 Sum_probs=41.1
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHhhcC-C-------CchhHHHHHHhhhh--------h-----hcccccchhhhhcc
Q psy15968 64 WDAWTKLGDMSKEAAMQRYIDEFINIVDS-T-------LGSDVEDMVKSLGT--------L-----YEAVNNEDIDLLLG 122 (250)
Q Consensus 64 WdAWk~LkGMSkEEAm~~YIellekLl~k-~-------~t~~~~~~l~~~~~--------~-----ye~v~~d~lel~~~ 122 (250)
+|.|-+ -.||-.+|..+..+|-.. . .+++..++|..+.- | =+.|..+++..+-+
T Consensus 29 fDsWGQ-----vvEA~deY~~La~~lkk~~~s~~~~~~fte~qkk~i~KiatcL~lRsk~Lq~~~~~~gi~led~K~l~~ 103 (128)
T 1ug7_A 29 FDSWGQ-----LVEAIDEYQILARHLQKEAQAQHNNSEFTEEQKKTIGKIATCLELRSAALQSTQSQEEFKLEDLKKLEP 103 (128)
T ss_dssp HHHHTC-----HHHHHHHHHHHHHHHHHHHTCSSSCCSSCHHHHHHHHHHHHHHHHHHHHHHCCSCCCSCCSHHHHTHHH
T ss_pred CCcHHH-----HHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHH
Confidence 588887 489999999998777554 2 34666666552111 1 12445666655555
Q ss_pred chhHhhhhcCCCch
Q psy15968 123 PTMDKLFARTGSKK 136 (250)
Q Consensus 123 ~~~e~v~~~p~~p~ 136 (250)
-+++-.-..|.+|+
T Consensus 104 ~lk~ll~~~~eFP~ 117 (128)
T 1ug7_A 104 ILKNILTYNKEFPF 117 (128)
T ss_dssp HHHTTTTCCSCCSS
T ss_pred HHHHhcccCCCCCC
Confidence 44444445566666
No 28
>2fly_A Proadrenomedullin N-20 terminal peptide; alpha helix, hormone/growth factor complex; NMR {Homo sapiens}
Probab=22.31 E-value=33 Score=21.05 Aligned_cols=12 Identities=25% Similarity=0.764 Sum_probs=9.1
Q ss_pred hHHHHHHHHHhc
Q psy15968 59 VRKTKWDAWTKL 70 (250)
Q Consensus 59 vgRaKWdAWk~L 70 (250)
.-|.||++|---
T Consensus 8 efrKKwn~w~ls 19 (26)
T 2fly_A 8 EFRKKWNKWALS 19 (26)
T ss_pred HHHHHHHHHHHh
Confidence 458899999643
No 29
>2q8v_A NBLA protein; phycobilisome, nutrient starvation, disassembly, bleaching, protein binding; 2.50A {Thermosynechococcus vulcanus} PDB: 2qdo_A
Probab=21.05 E-value=61 Score=23.52 Aligned_cols=37 Identities=8% Similarity=0.009 Sum_probs=25.0
Q ss_pred CcchhHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHhhc
Q psy15968 55 FWDIVRKTKWDAWT-KLGDMSKEAAMQRYIDEFINIVD 91 (250)
Q Consensus 55 ~fD~vgRaKWdAWk-~LkGMSkEEAm~~YIellekLl~ 91 (250)
-+.+.-.++-...+ ++..||+|+|+.--|++.++++-
T Consensus 11 ~LSLEQqF~L~~~~~qV~~ls~EQAqe~Lve~~rQmMi 48 (63)
T 2q8v_A 11 DLSFEQEFQMRVMEEQVSAMSLQEARELLLQASRLLMM 48 (63)
T ss_dssp SCCSSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 33444444433332 35689999999999999998763
No 30
>2dod_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=20.33 E-value=1.1e+02 Score=22.60 Aligned_cols=43 Identities=21% Similarity=0.284 Sum_probs=29.6
Q ss_pred CCCCHHHHHHHHHHHHHHhhcC---CCchhHHHHHHhhhhhhcccccc
Q psy15968 71 GDMSKEAAMQRYIDEFINIVDS---TLGSDVEDMVKSLGTLYEAVNNE 115 (250)
Q Consensus 71 kGMSkEEAm~~YIellekLl~k---~~t~~~~~~l~~~~~~ye~v~~d 115 (250)
.-+|.+||+..|.++|.+.--. +++.....++ .+|-|-.|++.
T Consensus 12 ~~~t~eea~~~Fk~LL~e~~V~p~~tWe~~~~~i~--~DpRY~aL~~~ 57 (82)
T 2dod_A 12 AIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIV--FDPRYLLLNPK 57 (82)
T ss_dssp SSCCHHHHHHHHHHHHHHTTCCSSSCHHHHHHHHH--TCSGGGTSCHH
T ss_pred ccCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHc--cCCccccCCHH
Confidence 4579999999999999875333 4445555554 56667666533
Done!