BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15969
(111 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270014519|gb|EFA10967.1| hypothetical protein TcasGA2_TC004129 [Tribolium castaneum]
Length = 565
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/81 (90%), Positives = 75/81 (92%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKEE + DQ TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT
Sbjct: 447 CKRKEESSNNSDQLPTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 506
Query: 88 VGNFFMNARRRSMDKWKDDDP 108
VGNFFMNARRRSMDKWKD+DP
Sbjct: 507 VGNFFMNARRRSMDKWKDEDP 527
>gi|189233657|ref|XP_001807372.1| PREDICTED: similar to GA15133-PA [Tribolium castaneum]
Length = 1151
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/81 (90%), Positives = 75/81 (92%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKEE + DQ TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT
Sbjct: 1033 CKRKEESSNNSDQLPTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 1092
Query: 88 VGNFFMNARRRSMDKWKDDDP 108
VGNFFMNARRRSMDKWKD+DP
Sbjct: 1093 VGNFFMNARRRSMDKWKDEDP 1113
>gi|357607758|gb|EHJ65677.1| putative One cut domain family member 2 [Danaus plexippus]
Length = 365
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 2/87 (2%)
Query: 24 KKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL 83
++ +CKRKE D++ D +PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL
Sbjct: 246 QRGSCKRKE--DMASDTLPSPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL 303
Query: 84 EPTTVGNFFMNARRRSMDKWKDDDPPK 110
EPTTVGNFFMNARRRSMDKWKDDD P
Sbjct: 304 EPTTVGNFFMNARRRSMDKWKDDDAPS 330
>gi|195402213|ref|XP_002059701.1| GJ19930 [Drosophila virilis]
gi|194155915|gb|EDW71099.1| GJ19930 [Drosophila virilis]
Length = 1074
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 71/80 (88%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT
Sbjct: 922 CRRKEEPHI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 979
Query: 88 VGNFFMNARRRSMDKWKDDD 107
VGNFFMNARRRSMDKW+DDD
Sbjct: 980 VGNFFMNARRRSMDKWRDDD 999
>gi|263359692|gb|ACY70528.1| hypothetical protein DVIR88_6g0065 [Drosophila virilis]
Length = 1076
Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 71/80 (88%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT
Sbjct: 924 CRRKEEPHI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 981
Query: 88 VGNFFMNARRRSMDKWKDDD 107
VGNFFMNARRRSMDKW+DDD
Sbjct: 982 VGNFFMNARRRSMDKWRDDD 1001
>gi|380016009|ref|XP_003691986.1| PREDICTED: one cut domain family member 2-like [Apis florea]
Length = 510
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEE-PDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRK+E + ++ Q PKKPRLVFTDLQRRTLQA
Sbjct: 379 ETFRRMWKWLQEPEFQRMSALRLAACKRKDEMANQAEHQQPAPKKPRLVFTDLQRRTLQA 438
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDP 108
IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKD+DP
Sbjct: 439 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDP 485
>gi|195450723|ref|XP_002072605.1| GK13692 [Drosophila willistoni]
gi|194168690|gb|EDW83591.1| GK13692 [Drosophila willistoni]
Length = 1032
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/81 (87%), Positives = 74/81 (91%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
TC+RKEE I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 879 TCRRKEESHI--EQMPHPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 936
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DDD
Sbjct: 937 TVGNFFMNARRRSMDKWRDDD 957
>gi|195133982|ref|XP_002011417.1| GI14052 [Drosophila mojavensis]
gi|193912040|gb|EDW10907.1| GI14052 [Drosophila mojavensis]
Length = 1059
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/81 (87%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 873 SCRRKEEPHI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 930
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DDD
Sbjct: 931 TVGNFFMNARRRSMDKWRDDD 951
>gi|350426167|ref|XP_003494354.1| PREDICTED: hepatocyte nuclear factor 6-like [Bombus impatiens]
Length = 225
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Query: 24 KKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL 83
++ CKRK+E +Q + PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL
Sbjct: 117 QRAACKRKDE-MANQGEQPAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL 175
Query: 84 EPTTVGNFFMNARRRSMDKWKDDDP 108
EPTTVGNFFMNARRRSMDKWKD+DP
Sbjct: 176 EPTTVGNFFMNARRRSMDKWKDEDP 200
>gi|198462296|ref|XP_001382225.2| GA15133 [Drosophila pseudoobscura pseudoobscura]
gi|198140047|gb|EAL29279.2| GA15133 [Drosophila pseudoobscura pseudoobscura]
Length = 1018
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 71/80 (88%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT
Sbjct: 864 CRRKEEPQI--EQMPHPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 921
Query: 88 VGNFFMNARRRSMDKWKDDD 107
VGNFFMNARRRSMDKW+DDD
Sbjct: 922 VGNFFMNARRRSMDKWRDDD 941
>gi|195172534|ref|XP_002027052.1| GL18146 [Drosophila persimilis]
gi|194112830|gb|EDW34873.1| GL18146 [Drosophila persimilis]
Length = 1018
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 71/80 (88%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT
Sbjct: 864 CRRKEEPQI--EQMPHPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 921
Query: 88 VGNFFMNARRRSMDKWKDDD 107
VGNFFMNARRRSMDKW+DDD
Sbjct: 922 VGNFFMNARRRSMDKWRDDD 941
>gi|195064440|ref|XP_001996570.1| GH24019 [Drosophila grimshawi]
gi|193892116|gb|EDV90982.1| GH24019 [Drosophila grimshawi]
Length = 1178
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/80 (87%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
C+RKEEP + +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT
Sbjct: 895 CRRKEEPHM--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 952
Query: 88 VGNFFMNARRRSMDKWKDDD 107
VGNFFMNARRRSMDKW+DDD
Sbjct: 953 VGNFFMNARRRSMDKWRDDD 972
>gi|194770207|ref|XP_001967188.1| GF15916 [Drosophila ananassae]
gi|190619334|gb|EDV34858.1| GF15916 [Drosophila ananassae]
Length = 448
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 73/79 (92%), Gaps = 2/79 (2%)
Query: 29 KRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 88
+RKEEP I +Q + PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV
Sbjct: 277 RRKEEPQI--EQMTQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 334
Query: 89 GNFFMNARRRSMDKWKDDD 107
GNFFMNA RRSMDKW+DDD
Sbjct: 335 GNFFMNACRRSMDKWRDDD 353
>gi|195354397|ref|XP_002043684.1| GM26776 [Drosophila sechellia]
gi|194128872|gb|EDW50915.1| GM26776 [Drosophila sechellia]
Length = 1085
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 71/81 (87%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 908 SCRRKEEPQI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 965
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DDD
Sbjct: 966 TVGNFFMNARRRSMDKWRDDD 986
>gi|194913534|ref|XP_001982719.1| GG16442 [Drosophila erecta]
gi|190647935|gb|EDV45238.1| GG16442 [Drosophila erecta]
Length = 1085
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 70/81 (86%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 909 SCRRKEEPQI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 966
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DD+
Sbjct: 967 TVGNFFMNARRRSMDKWRDDE 987
>gi|194770918|ref|XP_001967529.1| GF20615 [Drosophila ananassae]
gi|190622704|gb|EDV38228.1| GF20615 [Drosophila ananassae]
Length = 1109
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 70/80 (87%), Positives = 75/80 (93%), Gaps = 2/80 (2%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
C+RKEEP I +Q + PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT
Sbjct: 865 CRRKEEPQI--EQITQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 922
Query: 88 VGNFFMNARRRSMDKWKDDD 107
VGNFFMNARRRSMDKW+DD+
Sbjct: 923 VGNFFMNARRRSMDKWRDDN 942
>gi|6708088|gb|AAF25796.1|AF169227_1 cut-homeodomain protein [Drosophila melanogaster]
Length = 1081
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 71/81 (87%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 905 SCRRKEEPQI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 962
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DDD
Sbjct: 963 TVGNFFMNARRRSMDKWRDDD 983
>gi|24638658|ref|NP_524842.2| onecut, isoform A [Drosophila melanogaster]
gi|442614427|ref|NP_001259065.1| onecut, isoform B [Drosophila melanogaster]
gi|13632097|sp|Q9NJB5.2|ONEC_DROME RecName: Full=Homeobox protein onecut
gi|10726317|gb|AAF59330.2| onecut, isoform A [Drosophila melanogaster]
gi|440218152|gb|AGB96555.1| onecut, isoform B [Drosophila melanogaster]
Length = 1081
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 71/81 (87%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 905 SCRRKEEPQI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 962
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DDD
Sbjct: 963 TVGNFFMNARRRSMDKWRDDD 983
>gi|16197895|gb|AAL13705.1| GH28062p [Drosophila melanogaster]
Length = 976
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 71/81 (87%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 800 SCRRKEEPQI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 857
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DDD
Sbjct: 858 TVGNFFMNARRRSMDKWRDDD 878
>gi|328751785|gb|AEB39648.1| IP22193p [Drosophila melanogaster]
Length = 1018
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 71/81 (87%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+C+RKEEP I +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 905 SCRRKEEPQI--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 962
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DDD
Sbjct: 963 TVGNFFMNARRRSMDKWRDDD 983
>gi|307178291|gb|EFN67063.1| Homeobox protein onecut [Camponotus floridanus]
Length = 101
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/72 (90%), Positives = 68/72 (94%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++ Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR
Sbjct: 5 AEHQQPAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 64
Query: 97 RRSMDKWKDDDP 108
RRSMDKWKD+DP
Sbjct: 65 RRSMDKWKDEDP 76
>gi|345491295|ref|XP_001603364.2| PREDICTED: homeobox protein onecut-like [Nasonia vitripennis]
Length = 102
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/72 (90%), Positives = 68/72 (94%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++ Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR
Sbjct: 5 AEHQQPAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 64
Query: 97 RRSMDKWKDDDP 108
RRSMDKWKD+DP
Sbjct: 65 RRSMDKWKDEDP 76
>gi|195469367|ref|XP_002099609.1| GE14509 [Drosophila yakuba]
gi|194185710|gb|EDW99321.1| GE14509 [Drosophila yakuba]
Length = 1084
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/81 (85%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+C+RKEEP + +Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 908 SCRRKEEPQM--EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 965
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TVGNFFMNARRRSMDKW+DD+
Sbjct: 966 TVGNFFMNARRRSMDKWRDDE 986
>gi|328710627|ref|XP_003244317.1| PREDICTED: hypothetical protein LOC100158731 isoform 2
[Acyrthosiphon pisum]
Length = 821
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 74/82 (90%), Positives = 75/82 (91%), Gaps = 1/82 (1%)
Query: 28 CKRKEEPD-ISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKEE I D SS PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 709 CKRKEEVQPIVPDHSSAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 768
Query: 87 TVGNFFMNARRRSMDKWKDDDP 108
TVGNFFMNARRRSMDKWKD+DP
Sbjct: 769 TVGNFFMNARRRSMDKWKDEDP 790
>gi|328710625|ref|XP_001946230.2| PREDICTED: hypothetical protein LOC100158731 isoform 1
[Acyrthosiphon pisum]
Length = 811
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 74/82 (90%), Positives = 75/82 (91%), Gaps = 1/82 (1%)
Query: 28 CKRKEEPD-ISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKEE I D SS PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT
Sbjct: 699 CKRKEEVQPIVPDHSSAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 758
Query: 87 TVGNFFMNARRRSMDKWKDDDP 108
TVGNFFMNARRRSMDKWKD+DP
Sbjct: 759 TVGNFFMNARRRSMDKWKDEDP 780
>gi|405959224|gb|EKC25281.1| One cut domain family member 2 [Crassostrea gigas]
Length = 486
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ ++ +S TPKKPRLVFTD+QRRTL AIFKETKRPSKEMQ TIA+QLGLE TT
Sbjct: 396 CKRKEQ-ELPMQESRTPKKPRLVFTDIQRRTLHAIFKETKRPSKEMQATIAQQLGLEVTT 454
Query: 88 VGNFFMNARRRSMDKWKDDD 107
V NFFMNARRRS+DKW+DDD
Sbjct: 455 VANFFMNARRRSLDKWRDDD 474
>gi|340722035|ref|XP_003399417.1| PREDICTED: one cut domain family member 2-like [Bombus terrestris]
Length = 668
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRK+E +Q + PKKPRLVFTDLQRRTLQAI
Sbjct: 539 ETFRRMWKWLQEPEFQRMSALRLAACKRKDEM-ANQGEQPAPKKPRLVFTDLQRRTLQAI 597
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDP 108
FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKD+DP
Sbjct: 598 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDP 643
>gi|170040715|ref|XP_001848135.1| homeobox protein onecut [Culex quinquefasciatus]
gi|167864318|gb|EDS27701.1| homeobox protein onecut [Culex quinquefasciatus]
Length = 680
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 66/78 (84%), Positives = 69/78 (88%)
Query: 29 KRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 88
K+ EEP+ + KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV
Sbjct: 525 KKHEEPEPNVMTMGHSKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 584
Query: 89 GNFFMNARRRSMDKWKDD 106
GNFFMNARRRSMDKWKDD
Sbjct: 585 GNFFMNARRRSMDKWKDD 602
>gi|432889300|ref|XP_004075208.1| PREDICTED: one cut domain family member 2-like [Oryzias latipes]
Length = 263
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ D ++D+S+TPKK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE T
Sbjct: 168 ACKRKEQ-DTAKDRSNTPKKSRLVFTDLQRRTLLAIFKENKRPSKEMQLTISQQLGLELT 226
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TV NFFMNARRRS+DKW DD
Sbjct: 227 TVSNFFMNARRRSLDKWTDDG 247
>gi|383860558|ref|XP_003705756.1| PREDICTED: homeobox protein onecut-like [Megachile rotundata]
Length = 477
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 73/107 (68%), Positives = 84/107 (78%), Gaps = 1/107 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEE-PDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRK+E ++ Q PKKPRLVFTDLQRRTLQA
Sbjct: 346 ETFRRMWKWLQEPEFQRMSALRLAACKRKDEMASQAEHQQPAPKKPRLVFTDLQRRTLQA 405
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDP 108
IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKD+DP
Sbjct: 406 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDP 452
>gi|328787290|ref|XP_624996.3| PREDICTED: one cut domain family member 2 [Apis mellifera]
Length = 672
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 73/107 (68%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEE-PDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRK+E + ++ Q PKKPRLVFTDLQRRTLQA
Sbjct: 541 ETFRRMWKWLQEPEFQRMSALRLAACKRKDEMANQAEHQQPAPKKPRLVFTDLQRRTLQA 600
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDP 108
IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKD+DP
Sbjct: 601 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDP 647
>gi|241022756|ref|XP_002406007.1| ONECUT DNA binding protein, putative [Ixodes scapularis]
gi|215491834|gb|EEC01475.1| ONECUT DNA binding protein, putative [Ixodes scapularis]
Length = 97
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 70/87 (80%), Gaps = 7/87 (8%)
Query: 27 TCKRKEE-------PDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIAR 79
TCKRKEE P + PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQ+TI++
Sbjct: 3 TCKRKEESPGGASAPVSGSAAKNQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQITISQ 62
Query: 80 QLGLEPTTVGNFFMNARRRSMDKWKDD 106
QLGLE +TVGNFFMNARRRS DKW+D+
Sbjct: 63 QLGLELSTVGNFFMNARRRSQDKWQDE 89
>gi|242017908|ref|XP_002429426.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514352|gb|EEB16688.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 483
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 67/75 (89%), Positives = 72/75 (96%)
Query: 36 ISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNA 95
I+QD +S PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNA
Sbjct: 367 ITQDHNSAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNA 426
Query: 96 RRRSMDKWKDDDPPK 110
RRRSMDKW+D++P K
Sbjct: 427 RRRSMDKWRDEEPGK 441
>gi|339247085|ref|XP_003375176.1| One cut domain family member 3 [Trichinella spiralis]
gi|316971555|gb|EFV55313.1| One cut domain family member 3 [Trichinella spiralis]
Length = 123
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 71/102 (69%), Gaps = 9/102 (8%)
Query: 19 KKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIA 78
K CKRKEE + PKKPRLVFTD+QRRTLQAIFKETKRPSKEMQVTIA
Sbjct: 4 NKFHSTAYACKRKEEQQQQGIHTPGPKKPRLVFTDIQRRTLQAIFKETKRPSKEMQVTIA 63
Query: 79 RQLGLEPTTVGNFFMNARRRSMDKWKDDD---------PPKP 111
+QLGL+ +TV NFFMNARRR D+WKD+D PP P
Sbjct: 64 QQLGLDVSTVANFFMNARRRGADRWKDNDSNGSRVSMIPPGP 105
>gi|323650188|gb|ADX97180.1| hepatocyte nuclear factor 6 [Perca flavescens]
Length = 121
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ ++ S KKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TIA+QLGLE
Sbjct: 26 ACKRKEQDHGRSERGSVSKKPRLVFTDVQRRTLHAIFKENKRPSKELQITIAQQLGLELA 85
Query: 87 TVGNFFMNARRRSMDKWKDDDPPKP 111
TV NFFMNARRRS+DKW DD P
Sbjct: 86 TVSNFFMNARRRSLDKWVDDGSGHP 110
>gi|345325554|ref|XP_001509763.2| PREDICTED: hypothetical protein LOC100078758 [Ornithorhynchus
anatinus]
Length = 419
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 15 KKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQ 74
K + + K CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q
Sbjct: 311 KGPARWENKSLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQ 369
Query: 75 VTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 370 ITISQQLGLELSTVSNFFMNARRRSLDKWQDE 401
>gi|444514630|gb|ELV10615.1| Hepatocyte nuclear factor 6 [Tupaia chinensis]
Length = 376
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 280 ACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 338
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW+D+
Sbjct: 339 TVSNFFMNARRRSLDKWQDE 358
>gi|355778058|gb|EHH63094.1| Hepatocyte nuclear factor 6, partial [Macaca fascicularis]
Length = 311
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 215 ACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 273
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW+D+
Sbjct: 274 TVSNFFMNARRRSLDKWQDE 293
>gi|348505378|ref|XP_003440238.1| PREDICTED: one cut domain family member 2-like [Oreochromis
niloticus]
Length = 504
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 65/104 (62%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ D S+D+++TPKK RLVFTDLQRRTL AI
Sbjct: 385 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-DTSKDRNNTPKKSRLVFTDLQRRTLLAI 443
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS+DKW DD
Sbjct: 444 FKENKRPSKEMQLTISQQLGLELTTVSNFFMNARRRSLDKWTDD 487
>gi|157128226|ref|XP_001661353.1| homeobox protein onecut [Aedes aegypti]
gi|108882240|gb|EAT46465.1| AAEL002359-PA [Aedes aegypti]
Length = 648
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 65/78 (83%), Positives = 68/78 (87%)
Query: 29 KRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 88
K+ EEP+ KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV
Sbjct: 490 KKHEEPEPQSVMMGHSKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 549
Query: 89 GNFFMNARRRSMDKWKDD 106
GNFFMNARRRSMDKWKD+
Sbjct: 550 GNFFMNARRRSMDKWKDE 567
>gi|397515704|ref|XP_003828087.1| PREDICTED: hepatocyte nuclear factor 6 [Pan paniscus]
Length = 503
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 407 ACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 465
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW+D+
Sbjct: 466 TVSNFFMNARRRSLDKWQDE 485
>gi|170676473|gb|ACB30402.1| one cut homeobox 1 [Homo sapiens]
Length = 381
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 285 ACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 343
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW+D+
Sbjct: 344 TVSNFFMNARRRSLDKWQDE 363
>gi|2224905|gb|AAB61705.1| hepatocyte nuclear factor 6 [Homo sapiens]
Length = 292
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ +TP+KPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 196 ACKRKEQ-EHGKDRGNTPQKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 254
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW+D+
Sbjct: 255 TVSNFFMNARRRSLDKWQDE 274
>gi|410912294|ref|XP_003969625.1| PREDICTED: uncharacterized protein LOC101077949 [Takifugu rubripes]
Length = 378
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ ++ + KKPRLVFTD+QRRTL AIFKE KRPSKE+QVTIA+QLGLE
Sbjct: 283 ACKRKEQDHGRSERGNVSKKPRLVFTDVQRRTLHAIFKENKRPSKELQVTIAQQLGLELA 342
Query: 87 TVGNFFMNARRRSMDKWKDDDPPKP 111
TV NFFMNARRRS+DKW DD P
Sbjct: 343 TVSNFFMNARRRSLDKWVDDGSGHP 367
>gi|351715220|gb|EHB18139.1| Hepatocyte nuclear factor 6 [Heterocephalus glaber]
Length = 258
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ + PKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 163 ACKRKEQ-EHGKDRGNAPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 221
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW+D+
Sbjct: 222 TVSNFFMNARRRSLDKWQDE 241
>gi|53854796|gb|AAU95742.1| hepatocyte nuclear factor 6 alpha [Bos taurus]
Length = 91
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ STPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 16 ACKRKEQ-EHGKDRGSTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 74
Query: 87 TVGNFFMNARRRSMDKW 103
TV NFFMNARRRS+DKW
Sbjct: 75 TVSNFFMNARRRSLDKW 91
>gi|347963081|ref|XP_001237363.3| AGAP000061-PA [Anopheles gambiae str. PEST]
gi|333467368|gb|EAU77345.3| AGAP000061-PA [Anopheles gambiae str. PEST]
Length = 673
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 66/78 (84%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
Query: 29 KRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 88
K+ EEP+ T KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV
Sbjct: 548 KKPEEPENHVMMGHT-KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 606
Query: 89 GNFFMNARRRSMDKWKDD 106
GNFFMNARRRSMDKWKD+
Sbjct: 607 GNFFMNARRRSMDKWKDE 624
>gi|256077272|ref|XP_002574931.1| one cut domain family member [Schistosoma mansoni]
Length = 1064
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 60/79 (75%), Positives = 68/79 (86%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE I +S PKKPRLVFTD+QRRTLQAIFKETKRPSKEMQ TIA+QLGL+ +T
Sbjct: 581 CKRKESEHIKLAESRQPKKPRLVFTDIQRRTLQAIFKETKRPSKEMQSTIAQQLGLQVST 640
Query: 88 VGNFFMNARRRSMDKWKDD 106
V NFFMNARRRS+DKW++D
Sbjct: 641 VANFFMNARRRSLDKWQED 659
>gi|353229064|emb|CCD75235.1| putative one cut domain family member [Schistosoma mansoni]
Length = 1112
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 60/79 (75%), Positives = 68/79 (86%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE I +S PKKPRLVFTD+QRRTLQAIFKETKRPSKEMQ TIA+QLGL+ +T
Sbjct: 581 CKRKESEHIKLAESRQPKKPRLVFTDIQRRTLQAIFKETKRPSKEMQSTIAQQLGLQVST 640
Query: 88 VGNFFMNARRRSMDKWKDD 106
V NFFMNARRRS+DKW++D
Sbjct: 641 VANFFMNARRRSLDKWQED 659
>gi|242010366|ref|XP_002425939.1| homeobox protein onecut, putative [Pediculus humanus corporis]
gi|212509922|gb|EEB13201.1| homeobox protein onecut, putative [Pediculus humanus corporis]
Length = 590
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 61/63 (96%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKW 103
PKKPRLVFTDLQRRTLQAIF+ET+RPSK+MQVTIARQL LEP++V NFFMNARRRS+DKW
Sbjct: 179 PKKPRLVFTDLQRRTLQAIFRETERPSKQMQVTIARQLDLEPSSVVNFFMNARRRSIDKW 238
Query: 104 KDD 106
KDD
Sbjct: 239 KDD 241
>gi|410903215|ref|XP_003965089.1| PREDICTED: one cut domain family member 2-like [Takifugu rubripes]
Length = 452
Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 63/104 (60%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ D +++++STPKK RLVFTDLQRRTL AI
Sbjct: 333 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-DTAKERNSTPKKSRLVFTDLQRRTLLAI 391
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE +TV NFFMNARRRS+DKW DD
Sbjct: 392 FKENKRPSKEMQLTISQQLGLELSTVSNFFMNARRRSLDKWTDD 435
>gi|47205652|emb|CAF92200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 130
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
+ CKRKE+ + +D+++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 33 EACKRKEQ-EQHKDRNTAPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQITISQQLGLEL 91
Query: 86 TTVGNFFMNARRRSMDKWKDDDPPKP 111
+TV NFFMNARRR +D+W DD P
Sbjct: 92 STVSNFFMNARRRCVDRWHDDHSASP 117
>gi|119389124|pdb|2D5V|A Chain A, Crystal Structure Of Hnf-6alpha Dna-Binding Domain In
Complex With The Ttr Promoter
gi|119389125|pdb|2D5V|B Chain B, Crystal Structure Of Hnf-6alpha Dna-Binding Domain In
Complex With The Ttr Promoter
Length = 164
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 81 ACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 139
Query: 87 TVGNFFMNARRRSMDKW 103
TV NFFMNARRRS+DKW
Sbjct: 140 TVSNFFMNARRRSLDKW 156
>gi|402903187|ref|XP_003914459.1| PREDICTED: one cut domain family member 2-like [Papio anubis]
Length = 114
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 72/81 (88%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
TCKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 20 TCKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 77
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 78 TTVSNFFMNARRRSLEKWQDD 98
>gi|332230283|ref|XP_003264319.1| PREDICTED: one cut domain family member 2 [Nomascus leucogenys]
Length = 114
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 72/81 (88%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
TCKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 20 TCKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 77
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 78 TTVSNFFMNARRRSLEKWQDD 98
>gi|256072911|ref|XP_002572777.1| one cut domain family member [Schistosoma mansoni]
gi|360043057|emb|CCD78469.1| putative one cut domain family member [Schistosoma mansoni]
Length = 761
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/81 (76%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Query: 27 TCKRK-EEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
TCKRK EE +QD+ S+ KKPRLVFTD+QRRTL AIFKETKRPSKEMQ TIA+QL LE
Sbjct: 402 TCKRKTEETQKAQDERSS-KKPRLVFTDIQRRTLHAIFKETKRPSKEMQATIAQQLNLEV 460
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
+TV NFFMNARRRS+DKW DD
Sbjct: 461 STVANFFMNARRRSLDKWVDD 481
>gi|47551283|ref|NP_999824.1| ONECUT transcription factor HNF6 beta [Strongylocentrotus
purpuratus]
gi|39546182|gb|AAR28054.1| onecut [Strongylocentrotus purpuratus]
Length = 483
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/81 (74%), Positives = 69/81 (85%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
K+CK+KE+ S Q+S KKPRLVFTDLQRRTL AIFKE KRPSKEMQ+TIA+QLGLE
Sbjct: 371 KSCKKKEDDAKSPSQNSHIKKPRLVFTDLQRRTLHAIFKENKRPSKEMQITIAQQLGLEL 430
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
+TV NFFMNARRRS DKW+D+
Sbjct: 431 STVSNFFMNARRRSQDKWQDE 451
>gi|34733341|gb|AAQ81630.1| HNF6 beta [Strongylocentrotus purpuratus]
Length = 483
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 59/81 (72%), Positives = 68/81 (83%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
K+CK+KE+ S Q+S KKPRLVFTDLQRRT AIFKE KRPSKEMQ+TIA+QLGLE
Sbjct: 371 KSCKKKEDDAKSPSQNSHIKKPRLVFTDLQRRTFHAIFKENKRPSKEMQITIAQQLGLEL 430
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
+TV NFFMNARRRS DKW+D+
Sbjct: 431 STVSNFFMNARRRSQDKWQDE 451
>gi|393905285|gb|EJD73920.1| HrHNF-6 [Loa loa]
Length = 486
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDIS-QDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRK+E I+ QS+TPKKPRLVFTD+QRRTLQA
Sbjct: 308 ETFRRMAKWLQEPEFQRMSALRLAACKRKDEQQINGASQSATPKKPRLVFTDIQRRTLQA 367
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
IFKETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR D+
Sbjct: 368 IFKETKRPSREMQLTISQQLQLDPTTVANFFMNARRRGHDR 408
>gi|297489834|ref|XP_002697878.1| PREDICTED: one cut domain family member 2, partial [Bos taurus]
gi|296473801|tpg|DAA15916.1| TPA: one cut domain, family member 2-like [Bos taurus]
Length = 351
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + S+D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE T
Sbjct: 257 ACKRKEQ-EPSKDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLELT 315
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS++KW+DD
Sbjct: 316 TVSNFFMNARRRSLEKWQDD 335
>gi|72679554|gb|AAI00756.1| Onecut2 protein, partial [Mus musculus]
gi|72679721|gb|AAI00751.1| Onecut2 protein, partial [Mus musculus]
Length = 342
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 248 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 305
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 306 TTVSNFFMNARRRSLEKWQDD 326
>gi|443731149|gb|ELU16386.1| hypothetical protein CAPTEDRAFT_52697, partial [Capitella teleta]
Length = 246
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
TCKRKE +I + ++ PKKPRLVFTD+QRRTL AIFKETKRPSKEMQ TIA QLGL+ +
Sbjct: 168 TCKRKEM-EIPKQEAPAPKKPRLVFTDIQRRTLMAIFKETKRPSKEMQATIAEQLGLKVS 226
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DK+ +D
Sbjct: 227 TVANFFMNARRRSLDKYTED 246
>gi|149064465|gb|EDM14668.1| rCG46748 [Rattus norvegicus]
Length = 307
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 213 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 270
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 271 TTVSNFFMNARRRSLEKWQDD 291
>gi|392354744|ref|XP_002728603.2| PREDICTED: one cut domain family member 2-like [Rattus norvegicus]
Length = 460
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 342 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 399
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 400 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 444
>gi|355755052|gb|EHH58919.1| Transcription factor ONECUT-2, partial [Macaca fascicularis]
Length = 281
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 187 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 244
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 245 TTVSNFFMNARRRSLEKWQDD 265
>gi|73945471|ref|XP_541087.2| PREDICTED: one cut domain family member 2 isoform 1 [Canis lupus
familiaris]
Length = 307
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 213 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 270
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 271 TTVSNFFMNARRRSLEKWQDD 291
>gi|349980937|dbj|GAA32120.1| hepatocyte nuclear factor 6 [Clonorchis sinensis]
Length = 707
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 58/80 (72%), Positives = 65/80 (81%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
TCKRK E + + + KKPRLVFTD+QRRTL AIFKETKRPSKEMQ TIA+QL LE +
Sbjct: 345 TCKRKTEENQKPIEERSTKKPRLVFTDIQRRTLHAIFKETKRPSKEMQATIAQQLNLEVS 404
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW DD
Sbjct: 405 TVANFFMNARRRSLDKWVDD 424
>gi|355701964|gb|EHH29317.1| Transcription factor ONECUT-2, partial [Macaca mulatta]
Length = 309
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 215 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 272
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 273 TTVSNFFMNARRRSLEKWQDD 293
>gi|148677762|gb|EDL09709.1| one cut domain, family member 2 [Mus musculus]
Length = 307
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 213 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 270
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 271 TTVSNFFMNARRRSLEKWQDD 291
>gi|432101405|gb|ELK29587.1| One cut domain family member 2 [Myotis davidii]
Length = 307
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 213 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 270
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 271 TTVSNFFMNARRRSLEKWQDD 291
>gi|426386060|ref|XP_004059512.1| PREDICTED: one cut domain family member 2 [Gorilla gorilla gorilla]
Length = 307
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 213 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 270
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 271 TTVSNFFMNARRRSLEKWQDD 291
>gi|395511560|ref|XP_003760026.1| PREDICTED: one cut domain family member 2 [Sarcophilus harrisii]
Length = 302
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 208 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 265
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 266 TTVSNFFMNARRRSLEKWQDD 286
>gi|351704026|gb|EHB06945.1| One cut domain family member 2 [Heterocephalus glaber]
Length = 307
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 213 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 270
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 271 TTVSNFFMNARRRSLEKWQDD 291
>gi|431906952|gb|ELK11071.1| One cut domain family member 2 [Pteropus alecto]
Length = 395
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 277 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 334
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 335 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 379
>gi|395830749|ref|XP_003788481.1| PREDICTED: one cut domain family member 2 [Otolemur garnettii]
Length = 399
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 281 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 338
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 339 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 383
>gi|281337493|gb|EFB13077.1| hypothetical protein PANDA_009021 [Ailuropoda melanoleuca]
Length = 398
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 280 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 337
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 338 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 382
>gi|301769775|ref|XP_002920305.1| PREDICTED: one cut domain family member 2-like [Ailuropoda
melanoleuca]
Length = 396
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 278 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 335
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 336 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 380
>gi|358333598|dbj|GAA37091.2| hepatocyte nuclear factor 6 [Clonorchis sinensis]
Length = 1091
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 61/104 (58%), Positives = 75/104 (72%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE + S KKPRLVFTD+QRRTL AI
Sbjct: 548 ETFRRMWKWLQEPEFQRMSSLRLAACKRKEVEHVKTPDSRQSKKPRLVFTDIQRRTLHAI 607
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKETKRPSKEMQ TIA+QLGLE +TV NFFMNARRRS+DKW++D
Sbjct: 608 FKETKRPSKEMQSTIAQQLGLEVSTVANFFMNARRRSLDKWQED 651
>gi|226481475|emb|CAX73635.1| one cut domain, family member 1 [Schistosoma japonicum]
gi|226481477|emb|CAX73636.1| one cut domain, family member 1 [Schistosoma japonicum]
Length = 759
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 61/82 (74%), Positives = 68/82 (82%), Gaps = 4/82 (4%)
Query: 27 TCKRKEE--PDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLE 84
TCKRK E P + ++SS KKPRLVFTD+QRRTL AIFKETKRPSKEMQ TIA+QL LE
Sbjct: 401 TCKRKTEETPKVQDERSS--KKPRLVFTDIQRRTLHAIFKETKRPSKEMQATIAQQLNLE 458
Query: 85 PTTVGNFFMNARRRSMDKWKDD 106
+TV NFFMNARRRS+DKW DD
Sbjct: 459 VSTVANFFMNARRRSLDKWVDD 480
>gi|345305696|ref|XP_001510495.2| PREDICTED: one cut domain family member 2-like [Ornithorhynchus
anatinus]
Length = 583
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 465 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 522
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 523 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 567
>gi|194214699|ref|XP_001488942.2| PREDICTED: one cut domain family member 2 [Equus caballus]
Length = 372
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 254 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 311
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 312 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 356
>gi|426254093|ref|XP_004020720.1| PREDICTED: one cut domain family member 2, partial [Ovis aries]
Length = 368
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 250 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 307
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 308 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 352
>gi|344269846|ref|XP_003406758.1| PREDICTED: one cut domain family member 2-like [Loxodonta africana]
Length = 502
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 408 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 465
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 466 TTVSNFFMNARRRSLEKWQDD 486
>gi|344243763|gb|EGV99866.1| One cut domain family member 2 [Cricetulus griseus]
Length = 431
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 57/79 (72%), Positives = 71/79 (89%), Gaps = 1/79 (1%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +T
Sbjct: 336 CKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELST 394
Query: 88 VGNFFMNARRRSMDKWKDD 106
V NFFMNARRRS+DKW+D+
Sbjct: 395 VSNFFMNARRRSLDKWQDE 413
>gi|387915478|gb|AFK11348.1| one cut domain, family member 1 [Callorhinchus milii]
Length = 481
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 58/80 (72%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
TCKRKE+ + +++ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 384 TCKRKEQ-EHGKERGATPKKPRLVFTDVQRRTLHAIFKENKRPSKELQMTISQQLGLELS 442
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW+DD
Sbjct: 443 TVSNFFMNARRRSLDKWQDD 462
>gi|397514161|ref|XP_003827365.1| PREDICTED: one cut domain family member 2 [Pan paniscus]
Length = 487
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 393 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 450
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 451 TTVSNFFMNARRRSLEKWQDD 471
>gi|403268195|ref|XP_003945193.1| PREDICTED: LOW QUALITY PROTEIN: one cut domain family member 2
[Saimiri boliviensis boliviensis]
Length = 498
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKE EP+ +D++++ KK RLVFTDLQRRTL A
Sbjct: 380 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFA 437
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
IFKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 438 IFKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 482
>gi|332850176|ref|XP_523935.3| PREDICTED: one cut domain family member 2 [Pan troglodytes]
Length = 507
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ +D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 413 ACKRKEQEPN--KDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 470
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
TTV NFFMNARRRS++KW+DD
Sbjct: 471 TTVSNFFMNARRRSLEKWQDD 491
>gi|326677507|ref|XP_001920308.3| PREDICTED: one cut domain family member 2-like [Danio rerio]
Length = 461
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 65/107 (60%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ D S+D+S+TPKK RLVFTDLQRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-DPSKDRSNTPKKSRLVFTDLQRRTLLAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPP 109
FKE KRPSKEMQ+TI++QLGLE +TV NFFMNARRRS+DKW D+ P
Sbjct: 404 FKENKRPSKEMQMTISQQLGLELSTVSNFFMNARRRSLDKWLDEGSP 450
>gi|322366551|gb|ADW95349.1| Onecut/Hnf6 [Paracentrotus lividus]
Length = 465
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 62/104 (59%), Positives = 77/104 (74%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CK+KE+ S Q+S KKPRLVFTDLQRRTL AI
Sbjct: 328 ETFRRMWKWLQEPEFQRMSALRLAACKKKEDDAKSPSQNSHIKKPRLVFTDLQRRTLHAI 387
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TIA+QLGLE +TV NFFMNARRRS DKW+D+
Sbjct: 388 FKENKRPSKEMQITIAQQLGLELSTVSNFFMNARRRSQDKWQDE 431
>gi|269784935|ref|NP_001161619.1| onecut transcription factor [Saccoglossus kowalevskii]
gi|268054243|gb|ACY92608.1| onecut transcription factor [Saccoglossus kowalevskii]
Length = 405
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/86 (69%), Positives = 71/86 (82%)
Query: 21 KKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQ 80
++ CK+KEE + Q + PKKPRLVFTD+QRRTL AIFKETKRPSKEMQ+TIA+Q
Sbjct: 309 QRMSAPACKKKEEETKNPVQQNMPKKPRLVFTDIQRRTLHAIFKETKRPSKEMQITIAQQ 368
Query: 81 LGLEPTTVGNFFMNARRRSMDKWKDD 106
LGLE +TV NFFMNARRRS+DKW+DD
Sbjct: 369 LGLELSTVSNFFMNARRRSLDKWQDD 394
>gi|149019182|gb|EDL77823.1| one cut domain, family member 1, isoform CRA_a [Rattus norvegicus]
Length = 491
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/79 (72%), Positives = 71/79 (89%), Gaps = 1/79 (1%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +T
Sbjct: 396 CKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELST 454
Query: 88 VGNFFMNARRRSMDKWKDD 106
V NFFMNARRRS+DKW+D+
Sbjct: 455 VSNFFMNARRRSLDKWQDE 473
>gi|354465194|ref|XP_003495065.1| PREDICTED: hypothetical protein LOC100765766 [Cricetulus griseus]
Length = 405
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 285 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 343
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 344 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 387
>gi|3250876|emb|CAA75150.1| hepatocyte nuclear factor 6 beta [Rattus norvegicus]
Length = 491
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/79 (72%), Positives = 71/79 (89%), Gaps = 1/79 (1%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +T
Sbjct: 396 CKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELST 454
Query: 88 VGNFFMNARRRSMDKWKDD 106
V NFFMNARRRS+DKW+D+
Sbjct: 455 VSNFFMNARRRSLDKWQDE 473
>gi|6680241|ref|NP_032288.1| hepatocyte nuclear factor 6 [Mus musculus]
gi|13627024|sp|O08755.1|HNF6_MOUSE RecName: Full=Hepatocyte nuclear factor 6; Short=HNF-6; AltName:
Full=One cut domain family member 1; AltName: Full=One
cut homeobox 1
gi|2072998|gb|AAB53863.1| hepatocyte nuclear factor 6 [Mus musculus]
gi|23271452|gb|AAH24053.1| One cut domain, family member 1 [Mus musculus]
Length = 465
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|149019183|gb|EDL77824.1| one cut domain, family member 1, isoform CRA_b [Rattus norvegicus]
Length = 465
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|395503264|ref|XP_003755990.1| PREDICTED: hepatocyte nuclear factor 6 [Sarcophilus harrisii]
Length = 460
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 340 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 398
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 399 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 442
>gi|12083605|ref|NP_073162.1| hepatocyte nuclear factor 6 [Rattus norvegicus]
gi|13626998|sp|P70512.1|HNF6_RAT RecName: Full=Hepatocyte nuclear factor 6; Short=HNF-6; AltName:
Full=One cut domain family member 1; AltName: Full=One
cut homeobox 1
gi|1550795|emb|CAA65389.1| hepatocyte nuclear factor 6 alpha [Rattus norvegicus]
Length = 465
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|348572296|ref|XP_003471929.1| PREDICTED: hepatocyte nuclear factor 6 [Cavia porcellus]
Length = 465
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 346 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 404
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 405 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 448
>gi|49183030|gb|AAT57875.1| Hnf6 beta-b [Patiria miniata]
Length = 489
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 2/82 (2%)
Query: 26 KTCKRKEE-PDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLE 84
++CK+KEE ISQ Q+ KKPRLVFTD+QRRTL AIFKETKRP+KEMQVTIA+QLGLE
Sbjct: 378 ESCKKKEEEAKISQPQNHI-KKPRLVFTDIQRRTLHAIFKETKRPTKEMQVTIAQQLGLE 436
Query: 85 PTTVGNFFMNARRRSMDKWKDD 106
+TV NFFMNARRRS+DKW+D+
Sbjct: 437 LSTVSNFFMNARRRSLDKWQDE 458
>gi|49183028|gb|AAT57874.1| Hnf6 beta-a [Patiria miniata]
Length = 477
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 61/84 (72%), Positives = 71/84 (84%), Gaps = 2/84 (2%)
Query: 24 KKKTCKRKEE-PDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLG 82
+ CK+KEE ISQ Q+ KKPRLVFTD+QRRTL AIFKETKRP+KEMQVTIA+QLG
Sbjct: 364 RPAACKKKEEEAKISQPQNHI-KKPRLVFTDIQRRTLHAIFKETKRPTKEMQVTIAQQLG 422
Query: 83 LEPTTVGNFFMNARRRSMDKWKDD 106
LE +TV NFFMNARRRS+DKW+D+
Sbjct: 423 LELSTVSNFFMNARRRSLDKWQDE 446
>gi|432113976|gb|ELK36033.1| Hepatocyte nuclear factor 6 [Myotis davidii]
Length = 399
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 59/85 (69%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Query: 22 KKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQL 81
K + K CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QL
Sbjct: 299 KNQGKACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQL 357
Query: 82 GLEPTTVGNFFMNARRRSMDKWKDD 106
GLE +TV NFFMNARRRS+DKW+D+
Sbjct: 358 GLELSTVSNFFMNARRRSLDKWQDE 382
>gi|154147602|ref|NP_001093730.1| one cut homeobox 1 [Xenopus (Silurana) tropicalis]
gi|134025773|gb|AAI35776.1| onecut1 protein [Xenopus (Silurana) tropicalis]
Length = 493
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 57/80 (71%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
+CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 397 SCKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 455
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRRS+DKW+D+
Sbjct: 456 TVSNFFMNARRRSLDKWQDE 475
>gi|224062442|ref|XP_002197866.1| PREDICTED: hepatocyte nuclear factor 6 [Taeniopygia guttata]
Length = 457
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 337 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 395
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 396 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 439
>gi|126277592|ref|XP_001370228.1| PREDICTED: hepatocyte nuclear factor 6 [Monodelphis domestica]
Length = 460
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 340 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 398
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 399 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 442
>gi|426233286|ref|XP_004010648.1| PREDICTED: hepatocyte nuclear factor 6 [Ovis aries]
Length = 464
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|194034700|ref|XP_001929026.1| PREDICTED: hepatocyte nuclear factor 6 [Sus scrofa]
Length = 465
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|300793892|ref|NP_001178090.1| hepatocyte nuclear factor 6 [Bos taurus]
gi|296483131|tpg|DAA25246.1| TPA: one cut homeobox 1 [Bos taurus]
gi|440893322|gb|ELR46134.1| Hepatocyte nuclear factor 6 [Bos grunniens mutus]
Length = 465
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|118344340|ref|NP_001071994.1| transcription factor protein [Ciona intestinalis]
gi|70569877|dbj|BAE06494.1| transcription factor protein [Ciona intestinalis]
Length = 764
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 61/105 (58%), Positives = 80/105 (76%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ ++ ++PKKPRLVFTDLQRRTL AI
Sbjct: 532 ETFRRMWKWLQEPEFQRMSSLRLAACKRKEDEKSYENSVNSPKKPRLVFTDLQRRTLHAI 591
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDD 107
FKE+KRPSKEMQ+ I++QLGLE TTV NFFMNARRRS+DKW+DD+
Sbjct: 592 FKESKRPSKEMQIQISQQLGLEVTTVSNFFMNARRRSLDKWQDDE 636
>gi|402874366|ref|XP_003901010.1| PREDICTED: hepatocyte nuclear factor 6 [Papio anubis]
Length = 465
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|114657130|ref|XP_001170549.1| PREDICTED: hepatocyte nuclear factor 6 [Pan troglodytes]
Length = 465
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|324507255|gb|ADY43079.1| Hepatocyte nuclear factor 6 [Ascaris suum]
Length = 485
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQD-QSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKEE ++ Q PKKPRLVFTD+QRRTLQA
Sbjct: 353 ETFRRMAKWLQEPEFQRMSALRLAACKRKEEQQVNGGVQPVAPKKPRLVFTDIQRRTLQA 412
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
IFKETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR D+
Sbjct: 413 IFKETKRPSREMQLTISQQLQLDPTTVANFFMNARRRGHDR 453
>gi|291402980|ref|XP_002717789.1| PREDICTED: one cut homeobox 1 [Oryctolagus cuniculus]
Length = 466
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 346 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 404
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 405 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 448
>gi|426379127|ref|XP_004056256.1| PREDICTED: hepatocyte nuclear factor 6 [Gorilla gorilla gorilla]
Length = 465
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|432852700|ref|XP_004067341.1| PREDICTED: hepatocyte nuclear factor 6-like [Oryzias latipes]
Length = 449
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/104 (56%), Positives = 75/104 (72%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ ++ + KKPRLVFTD+QRRTL AI
Sbjct: 331 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQDHGRSERGNVTKKPRLVFTDVQRRTLHAI 390
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TIA+QLGLE TV NFFMNARRRS+DKW DD
Sbjct: 391 FKENKRPSKELQLTIAQQLGLELATVSNFFMNARRRSLDKWVDD 434
>gi|449282948|gb|EMC89673.1| One cut domain family member 2, partial [Columba livia]
Length = 76
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 68/78 (87%), Gaps = 3/78 (3%)
Query: 27 TCKRKE-EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
CKRKE EP+ ++++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 1 ACKRKEQEPN--KERNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLEL 58
Query: 86 TTVGNFFMNARRRSMDKW 103
TTV NFFMNARRRS++KW
Sbjct: 59 TTVSNFFMNARRRSLEKW 76
>gi|348500418|ref|XP_003437770.1| PREDICTED: hepatocyte nuclear factor 6-like [Oreochromis niloticus]
Length = 448
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/104 (56%), Positives = 75/104 (72%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ ++ + KKPRLVFTD+QRRTL AI
Sbjct: 329 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQDHGRSERGNVTKKPRLVFTDVQRRTLHAI 388
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TIA+QLGLE TV NFFMNARRRS+DKW DD
Sbjct: 389 FKENKRPSKELQLTIAQQLGLELATVSNFFMNARRRSLDKWVDD 432
>gi|24307887|ref|NP_004489.1| hepatocyte nuclear factor 6 [Homo sapiens]
gi|297696684|ref|XP_002825515.1| PREDICTED: hepatocyte nuclear factor 6 [Pongo abelii]
gi|332235594|ref|XP_003266991.1| PREDICTED: hepatocyte nuclear factor 6 [Nomascus leucogenys]
gi|13627184|sp|Q9UBC0.1|HNF6_HUMAN RecName: Full=Hepatocyte nuclear factor 6; Short=HNF-6; AltName:
Full=One cut domain family member 1; AltName: Full=One
cut homeobox 1
gi|4100316|gb|AAD00826.1| hepatocyte nuclear factor-6 alpha [Homo sapiens]
gi|4104419|gb|AAD02033.1| hepatocyte nuclear factor 6 [Homo sapiens]
gi|119597867|gb|EAW77461.1| one cut domain, family member 1 [Homo sapiens]
gi|187954629|gb|AAI40831.1| One cut homeobox 1 [Homo sapiens]
gi|208966968|dbj|BAG73498.1| one cut homeobox 1 [synthetic construct]
Length = 465
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|431895985|gb|ELK05403.1| Hepatocyte nuclear factor 6 [Pteropus alecto]
Length = 464
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 344 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 402
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 403 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 446
>gi|281345940|gb|EFB21524.1| hypothetical protein PANDA_013121 [Ailuropoda melanoleuca]
Length = 435
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 315 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 373
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 374 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 417
>gi|395822210|ref|XP_003784416.1| PREDICTED: hepatocyte nuclear factor 6 [Otolemur garnettii]
Length = 465
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|338717463|ref|XP_003363643.1| PREDICTED: LOW QUALITY PROTEIN: hepatocyte nuclear factor 6-like
[Equus caballus]
Length = 496
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 377 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 435
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 436 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 479
>gi|10566821|dbj|BAB15952.1| HrHNF-6 [Halocynthia roretzi]
Length = 695
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/105 (57%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + D+ + KKPRLVFTDLQRRTL AI
Sbjct: 530 ETFRRMWKWLQEPEFQRMSALRLAACKRKED-EKDYDKVNMQKKPRLVFTDLQRRTLHAI 588
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDD 107
FKE KRPSKEMQ+ I+ QLGLE TTV NFFMNARRRS+DKW+D++
Sbjct: 589 FKENKRPSKEMQMQISNQLGLEVTTVSNFFMNARRRSIDKWQDEE 633
>gi|109081188|ref|XP_001084951.1| PREDICTED: hepatocyte nuclear factor 6-like [Macaca mulatta]
Length = 363
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 243 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 301
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 302 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 345
>gi|410961217|ref|XP_003987180.1| PREDICTED: hepatocyte nuclear factor 6 [Felis catus]
Length = 465
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|432853533|ref|XP_004067754.1| PREDICTED: one cut domain family member 2-like [Oryzias latipes]
Length = 443
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+++ PKK RLVFTDLQRRTL AI
Sbjct: 323 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQHKDRNTAPKKQRLVFTDLQRRTLIAI 381
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQ+TI++QLGLE +TV NFFMNARRR +D+W DD P
Sbjct: 382 FKENKRPSKEMQITISQQLGLELSTVSNFFMNARRRCVDRWHDDHGSSP 430
>gi|345794965|ref|XP_851227.2| PREDICTED: hepatocyte nuclear factor 6 isoform 2 [Canis lupus
familiaris]
Length = 465
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 447
>gi|403302060|ref|XP_003941684.1| PREDICTED: uncharacterized protein LOC101039550 [Saimiri
boliviensis boliviensis]
Length = 1007
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 887 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 945
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 946 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 989
>gi|260792491|ref|XP_002591248.1| hypothetical protein BRAFLDRAFT_163102 [Branchiostoma floridae]
gi|229276452|gb|EEN47259.1| hypothetical protein BRAFLDRAFT_163102 [Branchiostoma floridae]
Length = 79
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 60/77 (77%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + PKKPRLVFTDLQRRTL AIFKE KRPSKEMQ IA+QLGL+ +
Sbjct: 3 ACKRKEQEAAKPPEQKGPKKPRLVFTDLQRRTLHAIFKENKRPSKEMQAQIAKQLGLDLS 62
Query: 87 TVGNFFMNARRRSMDKW 103
TV NFFMNARRRS DKW
Sbjct: 63 TVCNFFMNARRRSQDKW 79
>gi|268535782|ref|XP_002633026.1| C. briggsae CBR-CEH-48 protein [Caenorhabditis briggsae]
Length = 444
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEE-PDISQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKEE I+ Q PKK RLVFTD+QRRTLQA
Sbjct: 279 ETFRRMAKWLEEPEFQRMSALRLAACKRKEEQSTITATQIVAPKKTRLVFTDIQRRTLQA 338
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
IFKETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR +K
Sbjct: 339 IFKETKRPSREMQITISQQLQLDPTTVANFFMNARRRGHEK 379
>gi|292611171|ref|XP_002661005.1| PREDICTED: one cut domain family member 2-like [Danio rerio]
Length = 441
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 59/109 (54%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D++ PKK RLVFTDLQRRTL AI
Sbjct: 321 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQHKDRNMVPKKQRLVFTDLQRRTLIAI 379
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQ+TI++QLGLE +TV NFFMNARRR +D+W+D+ P
Sbjct: 380 FKENKRPSKEMQITISQQLGLELSTVSNFFMNARRRCVDRWQDEHASSP 428
>gi|355692730|gb|EHH27333.1| Hepatocyte nuclear factor 6, partial [Macaca mulatta]
Length = 435
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 315 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 373
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 374 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 417
>gi|301776949|ref|XP_002923894.1| PREDICTED: hepatocyte nuclear factor 6-like [Ailuropoda
melanoleuca]
Length = 434
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 314 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 372
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 373 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 416
>gi|42542744|gb|AAH66466.1| Onecut1 protein [Danio rerio]
Length = 456
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ ++ + KKPRLVFTD+QRRTL AI
Sbjct: 336 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEHGKGERGNISKKPRLVFTDVQRRTLHAI 395
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE TV NFFMNARRRS+DKW DD
Sbjct: 396 FKENKRPSKELQITISQQLGLELATVSNFFMNARRRSLDKWLDD 439
>gi|41055714|ref|NP_956867.1| hepatocyte nuclear factor 6 [Danio rerio]
gi|33989484|gb|AAH56601.1| One cut domain, family member 1 [Danio rerio]
Length = 461
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 55/79 (69%), Positives = 65/79 (82%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ ++ + KKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE T
Sbjct: 366 CKRKEQEHGKGERGNISKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELAT 425
Query: 88 VGNFFMNARRRSMDKWKDD 106
V NFFMNARRRS+DKW DD
Sbjct: 426 VSNFFMNARRRSLDKWLDD 444
>gi|3165407|gb|AAC17602.1|AAC17602 fos37502_1 [Homo sapiens]
Length = 96
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ + ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE T
Sbjct: 1 CKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELNT 59
Query: 88 VGNFFMNARRRSMDKWKDDDPPKP 111
V NFFMNARRR M++W ++ P
Sbjct: 60 VSNFFMNARRRCMNRWAEEPSTAP 83
>gi|344297814|ref|XP_003420591.1| PREDICTED: LOW QUALITY PROTEIN: hepatocyte nuclear factor 6-like
[Loxodonta africana]
Length = 352
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 232 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 290
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 291 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 334
>gi|47213722|emb|CAF95153.1| unnamed protein product [Tetraodon nigroviridis]
Length = 496
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 25 KKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLE 84
+ CKRKE+ +++ PK+ RLVFTDLQRRTLQAIF+E RPSKE+QVTI++QLGLE
Sbjct: 402 RGACKRKEQEQGKLERNQGPKRTRLVFTDLQRRTLQAIFRENHRPSKELQVTISQQLGLE 461
Query: 85 PTTVGNFFMNARRRSMDKWKDDDPP 109
+TV NFFMNARRR+++KW D+ P
Sbjct: 462 LSTVSNFFMNARRRNLNKWADEGRP 486
>gi|313246463|emb|CBY35369.1| unnamed protein product [Oikopleura dioica]
Length = 476
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
C+RKE D Q+ST KKPRLVFTD QRRTL IFKE KRPSKE+Q+TI+ QLGLE +T
Sbjct: 379 CRRKE--DERDRQNSTTKKPRLVFTDHQRRTLHQIFKENKRPSKEIQITISAQLGLELST 436
Query: 88 VGNFFMNARRRSMDKWKD 105
V NFFMNARRRS DKW D
Sbjct: 437 VSNFFMNARRRSSDKWLD 454
>gi|56606954|gb|AAW02845.1| onecut-1 isoform a [Danio rerio]
Length = 456
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 74/104 (71%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ ++ + KKPRLVFTD+QRRTL AI
Sbjct: 336 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQEHGKGERGNISKKPRLVFTDVQRRTLHAI 395
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE TV NFFMN RRRS+DKW DD
Sbjct: 396 FKENKRPSKELQITISQQLGLELATVSNFFMNGRRRSLDKWLDD 439
>gi|313228451|emb|CBY23602.1| unnamed protein product [Oikopleura dioica]
Length = 476
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ + ++ + ++ + C+RKE D Q+ST KKPRLVFTD QRRTL I
Sbjct: 354 ETFRRMQSWLREPEFQRMSSLRLAACRRKE--DERDRQNSTTKKPRLVFTDHQRRTLHQI 411
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKD 105
FKE KRPSKE+Q+TI+ QLGLE +TV NFFMNARRRS DKW D
Sbjct: 412 FKENKRPSKEIQITISAQLGLELSTVSNFFMNARRRSSDKWLD 454
>gi|392341355|ref|XP_003754319.1| PREDICTED: one cut domain family member 3-like [Rattus norvegicus]
Length = 320
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ D ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQ TI++QLGLE
Sbjct: 225 ACKRKEQ-DQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQATISQQLGLELN 283
Query: 87 TVGNFFMNARRRSMDKWKDD 106
TV NFFMNARRR M++W ++
Sbjct: 284 TVSNFFMNARRRCMNRWAEE 303
>gi|56606956|gb|AAW02846.1| onecut-1 isoform b [Danio rerio]
Length = 461
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/79 (68%), Positives = 64/79 (81%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ ++ + KKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE T
Sbjct: 366 CKRKEQEHGKGERGNISKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELAT 425
Query: 88 VGNFFMNARRRSMDKWKDD 106
V NFFMN RRRS+DKW DD
Sbjct: 426 VSNFFMNGRRRSLDKWLDD 444
>gi|449269309|gb|EMC80099.1| Hepatocyte nuclear factor 6, partial [Columba livia]
Length = 395
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 275 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 333
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+DKW+D+
Sbjct: 334 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDE 377
>gi|296222711|ref|XP_002807552.1| PREDICTED: LOW QUALITY PROTEIN: one cut domain family member 2
[Callithrix jacchus]
Length = 505
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 387 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 445
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 446 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 489
>gi|348527698|ref|XP_003451356.1| PREDICTED: one cut domain family member 2-like [Oreochromis
niloticus]
Length = 443
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+++ PKK RLVFTDLQRRTL AI
Sbjct: 323 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQHKDRNTAPKKQRLVFTDLQRRTLIAI 381
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQ+TI++QLGLE +TV NFFMNARRR +D+W DD P
Sbjct: 382 FKENKRPSKEMQITISQQLGLELSTVSNFFMNARRRCVDRWHDDHGTSP 430
>gi|119895449|ref|XP_875488.2| PREDICTED: uncharacterized protein LOC618065 [Bos taurus]
Length = 199
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 23 KKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLG 82
KK+ CKRKE+ + ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLG
Sbjct: 99 KKEVACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLG 157
Query: 83 LEPTTVGNFFMNARRRSMDKW 103
LE TV NFFMNARRR M++W
Sbjct: 158 LELNTVSNFFMNARRRCMNRW 178
>gi|281347273|gb|EFB22857.1| hypothetical protein PANDA_015521 [Ailuropoda melanoleuca]
Length = 90
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE
Sbjct: 13 ACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELN 71
Query: 87 TVGNFFMNARRRSMDKWKD 105
TV NFFMNARRR M++W +
Sbjct: 72 TVSNFFMNARRRCMNRWAE 90
>gi|410924457|ref|XP_003975698.1| PREDICTED: one cut domain family member 2-like [Takifugu rubripes]
Length = 456
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/81 (66%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKEE D ++++ PKKPRLVFTDLQRRTL AIF+E +RPSKEMQ+TI++QLGLE +T
Sbjct: 362 CKRKEE-DRGRERNQVPKKPRLVFTDLQRRTLVAIFRENRRPSKEMQITISQQLGLELST 420
Query: 88 VGNFFMNARRRSMDKWKDDDP 108
V NFFMN+RRR D+W ++P
Sbjct: 421 VSNFFMNSRRRCPDRWDTEEP 441
>gi|297477208|ref|XP_002689228.1| PREDICTED: one cut domain family member 3 [Bos taurus]
gi|296485427|tpg|DAA27542.1| TPA: hCG2040174-like [Bos taurus]
Length = 313
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE
Sbjct: 217 ACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELN 275
Query: 87 TVGNFFMNARRRSMDKW 103
TV NFFMNARRR M++W
Sbjct: 276 TVSNFFMNARRRCMNRW 292
>gi|297702661|ref|XP_002828291.1| PREDICTED: one cut domain family member 2 [Pongo abelii]
Length = 472
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/104 (58%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + S+D++++ KK RLVFTDLQRRTL AI
Sbjct: 354 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPSKDRNNSQKKSRLVFTDLQRRTLFAI 412
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 413 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 456
>gi|301611997|ref|XP_002935504.1| PREDICTED: one cut domain family member 2-like [Xenopus (Silurana)
tropicalis]
Length = 417
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/86 (61%), Positives = 68/86 (79%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
+ CKRKE+ +++ PK+ RLVFTD+QRRTL AIF E +RPSKE+Q+TIA+QLGLE
Sbjct: 313 EACKRKEQEQSKAERNHVPKRHRLVFTDIQRRTLHAIFHENQRPSKELQITIAQQLGLEL 372
Query: 86 TTVGNFFMNARRRSMDKWKDDDPPKP 111
+TV NFFMNARRRS+DKW D+ +P
Sbjct: 373 STVSNFFMNARRRSLDKWMDEGHGRP 398
>gi|119220564|ref|NP_004843.2| one cut domain family member 2 [Homo sapiens]
gi|294862454|sp|O95948.2|ONEC2_HUMAN RecName: Full=One cut domain family member 2; AltName:
Full=Hepatocyte nuclear factor 6-beta; Short=HNF-6-beta;
AltName: Full=One cut homeobox 2; AltName:
Full=Transcription factor ONECUT-2; Short=OC-2
gi|119583449|gb|EAW63045.1| one cut domain, family member 2 [Homo sapiens]
Length = 504
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 386 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 444
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 445 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 488
>gi|355755287|gb|EHH59034.1| hypothetical protein EGM_09032, partial [Macaca fascicularis]
Length = 83
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ ++++ PKK RLVFTDLQRRTL AIFKE KRPSKE QVTI++QLGLE T
Sbjct: 1 CKRKEQEQ-QKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEGQVTISQQLGLELNT 59
Query: 88 VGNFFMNARRRSMDKWKDDDPPKP 111
V NFFMNARRR M++W ++ P
Sbjct: 60 VSNFFMNARRRCMNRWAEEPSTAP 83
>gi|56791840|gb|AAW30421.1| HNF6c [Oikopleura dioica]
Length = 463
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ + ++ + ++ + C+RKE D Q+ST KKPRLVFTD QRRTL I
Sbjct: 354 ETFRRMQSWLREPEFQRMSSLRLAACRRKE--DERDRQNSTTKKPRLVFTDHQRRTLHQI 411
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKD 105
FKE KRP KE+Q+TI+ QLGLE +TV NFFMNARRRS DKW D
Sbjct: 412 FKENKRPFKEIQITISAQLGLELSTVSNFFMNARRRSSDKWLD 454
>gi|194678259|ref|XP_001251176.2| PREDICTED: one cut domain family member 2 [Bos taurus]
Length = 428
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 61/104 (58%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + S+D++++ KK RLVFTDLQRRTL AI
Sbjct: 310 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPSKDRNNSQKKSRLVFTDLQRRTLFAI 368
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 369 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 412
>gi|308452881|ref|XP_003089217.1| hypothetical protein CRE_22230 [Caenorhabditis remanei]
gi|308241577|gb|EFO85529.1| hypothetical protein CRE_22230 [Caenorhabditis remanei]
Length = 480
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQ-SSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKEE S PKK RLVFTD+QRRTLQA
Sbjct: 299 ETFRRMAKWLEEPEFQRMSALRLAACKRKEELSTSPTTPMIVPKKTRLVFTDIQRRTLQA 358
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMD 101
IF+ETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR D
Sbjct: 359 IFRETKRPSREMQITISQQLNLDPTTVANFFMNARRRGHD 398
>gi|308469331|ref|XP_003096904.1| CRE-CEH-48 protein [Caenorhabditis remanei]
gi|308241319|gb|EFO85271.1| CRE-CEH-48 protein [Caenorhabditis remanei]
Length = 465
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQ-SSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKEE S PKK RLVFTD+QRRTLQA
Sbjct: 284 ETFRRMAKWLEEPEFQRMSALRLAACKRKEELSTSPTTPMIVPKKTRLVFTDIQRRTLQA 343
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMD 101
IF+ETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR D
Sbjct: 344 IFRETKRPSREMQITISQQLNLDPTTVANFFMNARRRGHD 383
>gi|119220568|ref|NP_919244.2| one cut domain family member 2 [Mus musculus]
gi|294862455|sp|Q6XBJ3.2|ONEC2_MOUSE RecName: Full=One cut domain family member 2; AltName: Full=One cut
homeobox 2; AltName: Full=Transcription factor ONECUT-2;
Short=OC-2
Length = 505
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 387 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 445
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 446 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 489
>gi|440905160|gb|ELR55581.1| One cut domain family member 2, partial [Bos grunniens mutus]
Length = 377
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 61/104 (58%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + S+D++++ KK RLVFTDLQRRTL AI
Sbjct: 260 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPSKDRNNSQKKSRLVFTDLQRRTLFAI 318
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 319 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 362
>gi|34558615|gb|AAP69907.1| transcription factor ONECUT2 [Mus musculus]
Length = 486
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 368 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 426
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 427 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 470
>gi|301618950|ref|XP_002938867.1| PREDICTED: hepatocyte nuclear factor 6-like [Xenopus (Silurana)
tropicalis]
Length = 439
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D++ PKK RLVFTDLQRRTL AI
Sbjct: 319 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKDRNLQPKKQRLVFTDLQRRTLIAI 377
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQ+TI++QLGLE TV NFFMNARRR M++W++D P
Sbjct: 378 FKENKRPSKEMQITISQQLGLELNTVSNFFMNARRRCMNRWQEDPGSNP 426
>gi|126321625|ref|XP_001366432.1| PREDICTED: one cut domain family member 2 [Monodelphis domestica]
Length = 489
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 371 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 429
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 430 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 473
>gi|17538688|ref|NP_501046.1| Protein CEH-48 [Caenorhabditis elegans]
gi|352645614|emb|CCD64998.1| Protein CEH-48 [Caenorhabditis elegans]
Length = 459
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDI-SQDQSSTPKKPRLVFTDLQRRTLQA 61
E R+ K ++ + ++ + CKRKEE + Q PKK RLVF+D+QRRTLQA
Sbjct: 279 ETFRRMAKWLEEPEFQRMSALRLAACKRKEEHTTPNSPQMVVPKKTRLVFSDIQRRTLQA 338
Query: 62 IFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMD 101
IF+ETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR D
Sbjct: 339 IFRETKRPSREMQITISQQLNLDPTTVANFFMNARRRGHD 378
>gi|73909017|gb|AAI03669.1| Onecut2 protein [Mus musculus]
Length = 438
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 320 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 378
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 379 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 422
>gi|348576826|ref|XP_003474187.1| PREDICTED: one cut domain family member 2-like [Cavia porcellus]
Length = 469
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 351 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 409
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 410 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 453
>gi|410904775|ref|XP_003965867.1| PREDICTED: one cut domain family member 2-like [Takifugu rubripes]
Length = 453
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/84 (63%), Positives = 68/84 (80%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
+ CKRKE+ +++ PK+ RLVFTDLQRRTLQAIF+E RPSKE+QVTI++QLGLE
Sbjct: 350 EACKRKEQEQSKLERNQGPKRTRLVFTDLQRRTLQAIFRENHRPSKELQVTISQQLGLEL 409
Query: 86 TTVGNFFMNARRRSMDKWKDDDPP 109
+TV NFFMNARRR+++KW D+ P
Sbjct: 410 STVSNFFMNARRRNLNKWADEGRP 433
>gi|47217875|emb|CAG02368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 421
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/98 (55%), Positives = 70/98 (71%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ ++ + KKPRLVFTD+QRRTL AI
Sbjct: 298 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQDHGRSERGNVSKKPRLVFTDVQRRTLHAI 357
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSM 100
FKE KRPSKE+QVTIA+QLGLE TV NFFMNARRR++
Sbjct: 358 FKENKRPSKELQVTIAQQLGLELATVSNFFMNARRRAL 395
>gi|4468941|emb|CAB38253.1| ONECUT-2 transcription factor (OC-2) [Homo sapiens]
Length = 485
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 367 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 425
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 426 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 469
>gi|293343116|ref|XP_002725406.1| PREDICTED: one cut domain family member 2-like, partial [Rattus
norvegicus]
Length = 452
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 334 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 392
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 393 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 436
>gi|348525685|ref|XP_003450352.1| PREDICTED: one cut domain family member 2-like [Oreochromis
niloticus]
Length = 451
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/84 (61%), Positives = 67/84 (79%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
+ CKRKE+ +++ PK+ RLVFTDLQRRTL AIF+E RP+KE+QVTIA+QLGLE
Sbjct: 348 EACKRKEQEQNKLERNQGPKRTRLVFTDLQRRTLMAIFRENHRPTKELQVTIAQQLGLEL 407
Query: 86 TTVGNFFMNARRRSMDKWKDDDPP 109
+TV NFFMNARRR+++KW D+ P
Sbjct: 408 STVSNFFMNARRRNLNKWADEGRP 431
>gi|68399729|ref|XP_694209.1| PREDICTED: one cut domain family member 2 [Danio rerio]
Length = 451
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/104 (53%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 327 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQHKERNMAPKKQRLVFTDLQRRTLIAI 385
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE +TV NFFMNARRR +D+W ++
Sbjct: 386 FKENKRPSKEMQLTISQQLGLELSTVSNFFMNARRRCVDRWHEE 429
>gi|410977830|ref|XP_003995303.1| PREDICTED: one cut domain family member 2, partial [Felis catus]
Length = 412
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 294 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 352
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 353 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 396
>gi|62910168|gb|AAY21054.1| one cut domain, family member 1 [Mus musculus]
Length = 441
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/98 (57%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AI
Sbjct: 345 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAI 403
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSM 100
FKE KRPSKE+Q+TI++QLGLE +TV NFFMNARRRS+
Sbjct: 404 FKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSL 441
>gi|297275354|ref|XP_001087035.2| PREDICTED: hypothetical protein LOC698537 [Macaca mulatta]
Length = 1140
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++D++++ KK RLVFTDLQRRTL AI
Sbjct: 1022 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKDRNNSQKKSRLVFTDLQRRTLFAI 1080
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 1081 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 1124
>gi|432916709|ref|XP_004079355.1| PREDICTED: one cut domain family member 2-like [Oryzias latipes]
Length = 467
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/105 (53%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKEE D +++S PKK RLVFTDLQRRTL AI
Sbjct: 334 ETFRRMWKWLQEPEFQRMSALRLAACKRKEE-DRGRERSQVPKKQRLVFTDLQRRTLVAI 392
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDD 107
F+E +RPSKEMQ+TI++QLGLE +TV NFFMN+RRR D+W ++
Sbjct: 393 FRENRRPSKEMQLTISQQLGLELSTVSNFFMNSRRRCPDRWDTEE 437
>gi|432910516|ref|XP_004078394.1| PREDICTED: one cut domain family member 2-like [Oryzias latipes]
Length = 452
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
+ CKRKE+ +++ PK+ RLVFTDLQRRTL AIF+E RP+KE+QVTI++QLGLE
Sbjct: 349 EACKRKEQEQSKMERNQGPKRTRLVFTDLQRRTLLAIFRENHRPTKELQVTISQQLGLEL 408
Query: 86 TTVGNFFMNARRRSMDKWKDDDPP 109
+TV NFFMNARRR+++KW D+ P
Sbjct: 409 STVSNFFMNARRRNLNKWADEGRP 432
>gi|253723104|pdb|1S7E|A Chain A, Solution Structure Of Hnf-6
Length = 147
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +
Sbjct: 79 ACKRKEQ-EHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 137
Query: 87 TVGNFFMNAR 96
TV NFFMNAR
Sbjct: 138 TVSNFFMNAR 147
>gi|440910438|gb|ELR60235.1| One cut domain family member 3, partial [Bos grunniens mutus]
Length = 74
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE
Sbjct: 2 ACKRKEQEQ-QKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELN 60
Query: 87 TVGNFFMNARRRSM 100
TV NFFMNARRR M
Sbjct: 61 TVSNFFMNARRRCM 74
>gi|126323585|ref|XP_001371302.1| PREDICTED: hypothetical protein LOC100017888 [Monodelphis
domestica]
Length = 476
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 354 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKERTLQPKKQRLVFTDLQRRTLIAI 412
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQVTI++QLGLE TV NFFMNARRR M++W+++
Sbjct: 413 FKENKRPSKEMQVTISQQLGLELNTVSNFFMNARRRCMNRWQEE 456
>gi|348500918|ref|XP_003438018.1| PREDICTED: one cut domain family member 2-like [Oreochromis
niloticus]
Length = 467
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKEE D ++++ PKK RLVFTDLQRRTL AI
Sbjct: 337 ETFRRMWKWLQEPEFQRMSALRLAACKRKEE-DRGRERNQVPKKQRLVFTDLQRRTLVAI 395
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDD 107
F+E +RPSKEMQ+TI++QLGLE +TV NFFMN+RRR D+W ++
Sbjct: 396 FRENRRPSKEMQLTISQQLGLELSTVSNFFMNSRRRCPDRWDAEE 440
>gi|363743976|ref|XP_003642951.1| PREDICTED: one cut domain family member 2-like [Gallus gallus]
Length = 453
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 59/104 (56%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +++++++ KK RLVFTDLQRRTL AI
Sbjct: 335 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKERNNSQKKSRLVFTDLQRRTLFAI 393
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 394 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 437
>gi|341895267|gb|EGT51202.1| hypothetical protein CAEBREN_28920 [Caenorhabditis brenneri]
Length = 456
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 60/79 (75%), Gaps = 11/79 (13%)
Query: 28 CKRKEE-----PDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLG 82
CKRKEE P I PKK RLVFTD+QRRTLQAIFKETKRPS+EMQVTI++QL
Sbjct: 302 CKRKEETTTPTPLI------VPKKTRLVFTDIQRRTLQAIFKETKRPSREMQVTISQQLN 355
Query: 83 LEPTTVGNFFMNARRRSMD 101
L+ TTV NFFMNARRR D
Sbjct: 356 LDITTVANFFMNARRRGHD 374
>gi|122937424|ref|NP_001073957.1| one cut domain family member 3 [Homo sapiens]
gi|122064635|sp|O60422.2|ONEC3_HUMAN RecName: Full=One cut domain family member 3; AltName: Full=One cut
homeobox 3; AltName: Full=Transcription factor ONECUT-3;
Short=OC-3
Length = 494
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 374 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAI 432
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQVTI++QLGLE TV NFFMNARRR M++W ++ P
Sbjct: 433 FKENKRPSKEMQVTISQQLGLELNTVSNFFMNARRRCMNRWAEEPSTAP 481
>gi|119589870|gb|EAW69464.1| hCG2040174 [Homo sapiens]
Length = 493
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 373 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAI 431
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQVTI++QLGLE TV NFFMNARRR M++W ++ P
Sbjct: 432 FKENKRPSKEMQVTISQQLGLELNTVSNFFMNARRRCMNRWAEEPSTAP 480
>gi|355702939|gb|EHH29430.1| hypothetical protein EGK_09858, partial [Macaca mulatta]
Length = 88
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
CKRKE+ ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE T
Sbjct: 1 CKRKEQEQ-QKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELNT 59
Query: 88 VGNFFMNARRRSM 100
V NFFMNARRR M
Sbjct: 60 VSNFFMNARRRCM 72
>gi|395831317|ref|XP_003788749.1| PREDICTED: one cut domain family member 3 [Otolemur garnettii]
Length = 493
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 373 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAI 431
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQVTI++QLGLE TV NFFMNARRR M++W ++
Sbjct: 432 FKENKRPSKEMQVTISQQLGLELNTVSNFFMNARRRCMNRWAEE 475
>gi|363743730|ref|XP_003642905.1| PREDICTED: one cut domain family member 2-like [Gallus gallus]
Length = 441
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +D+S PKK RLVFTDLQRRTL AI
Sbjct: 321 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKDRSLQPKKQRLVFTDLQRRTLIAI 379
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQ+TI++QLGLE TV NFFMNARRR M++W+++ P
Sbjct: 380 FKENKRPSKEMQMTISQQLGLELNTVSNFFMNARRRCMNRWQEEPGTNP 428
>gi|321477224|gb|EFX88183.1| hypothetical protein DAPPUDRAFT_32500 [Daphnia pulex]
Length = 148
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/49 (97%), Positives = 49/49 (100%)
Query: 48 RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
RLVFTDLQRRTLQAIFKETKRPSKEMQVTIA+QLGLEPTTVGNFFMNAR
Sbjct: 100 RLVFTDLQRRTLQAIFKETKRPSKEMQVTIAKQLGLEPTTVGNFFMNAR 148
>gi|313244997|emb|CBY42476.1| unnamed protein product [Oikopleura dioica]
Length = 226
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE D + KKPRLVFTD QRR L +IFKE +RP+KE Q++I+ QLGLE +
Sbjct: 78 ACKRKESGD--HKRPPVNKKPRLVFTDRQRRMLHSIFKENRRPTKEQQLSISSQLGLEVS 135
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
TV NFFMNARRRSMDKW + +
Sbjct: 136 TVSNFFMNARRRSMDKWSEAE 156
>gi|148699593|gb|EDL31540.1| one cut domain, family member 3 [Mus musculus]
Length = 489
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ D ++++ PKK RLVFTDLQRRTL AI
Sbjct: 370 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-DQQKERALQPKKQRLVFTDLQRRTLIAI 428
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ TI++QLGLE TV NFFMNARRR M++W ++
Sbjct: 429 FKENKRPSKEMQATISQQLGLELNTVSNFFMNARRRCMNRWAEE 472
>gi|56791836|gb|AAW30419.1| HNF6a [Oikopleura dioica]
Length = 270
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ +K ++ + ++ + CKRKE D + KKPRLVFTD QRR L +I
Sbjct: 98 ETFRRMKKWLQEPEYQRMAALRIAACKRKESGD--HKRPPVNKKPRLVFTDRQRRMLHSI 155
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDD 107
FKE +RP+KE Q++I+ QLGLE +TV NFFMNARRRSMDKW + +
Sbjct: 156 FKENRRPTKEQQLSISSQLGLEVSTVSNFFMNARRRSMDKWSEAE 200
>gi|56790319|ref|NP_694516.1| one cut domain, family member, like [Danio rerio]
gi|17999893|gb|AAL02365.1| onecut homeodomain protein [Danio rerio]
Length = 446
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/81 (56%), Positives = 66/81 (81%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
+ CKRKE+ +++ PK+ RLVFTDLQRRTL AIF+E RP+K++Q+TI++QLGLE
Sbjct: 343 EACKRKEQEQSKVERNQGPKRTRLVFTDLQRRTLMAIFRENHRPTKDLQITISQQLGLEL 402
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
+TV NFFMNARRR++++W ++
Sbjct: 403 STVSNFFMNARRRNLNRWAEE 423
>gi|190338384|gb|AAI63394.1| One cut domain, family member, like [Danio rerio]
gi|190338386|gb|AAI63397.1| One cut domain, family member, like [Danio rerio]
gi|190339672|gb|AAI63019.1| One cut domain, family member, like [Danio rerio]
Length = 446
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/81 (56%), Positives = 66/81 (81%)
Query: 26 KTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
+ CKRKE+ +++ PK+ RLVFTDLQRRTL AIF+E RP+K++Q+TI++QLGLE
Sbjct: 343 EACKRKEQEQSKVERNQGPKRTRLVFTDLQRRTLMAIFRENHRPTKDLQITISQQLGLEL 402
Query: 86 TTVGNFFMNARRRSMDKWKDD 106
+TV NFFMNARRR++++W ++
Sbjct: 403 STVSNFFMNARRRNLNRWAEE 423
>gi|40538836|ref|NP_631972.2| one cut domain family member 3 [Mus musculus]
gi|122064636|sp|Q8K557.2|ONEC3_MOUSE RecName: Full=One cut domain family member 3; AltName: Full=One cut
homeobox 3; AltName: Full=Transcription factor ONECUT-3;
Short=OC-3
gi|38614222|gb|AAH58700.1| One cut domain, family member 3 [Mus musculus]
Length = 490
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ D ++++ PKK RLVFTDLQRRTL AI
Sbjct: 371 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-DQQKERALQPKKQRLVFTDLQRRTLIAI 429
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ TI++QLGLE TV NFFMNARRR M++W ++
Sbjct: 430 FKENKRPSKEMQATISQQLGLELNTVSNFFMNARRRCMNRWAEE 473
>gi|20373113|gb|AAL86921.1| onecut 3 [Mus musculus]
Length = 490
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ D ++++ PKK RLVFTDLQRRTL AI
Sbjct: 371 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-DQQKERALQPKKQRLVFTDLQRRTLIAI 429
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ TI++QLGLE TV NFFMNARRR M++W ++
Sbjct: 430 FKENKRPSKEMQATISQQLGLELNTVSNFFMNARRRCMNRWAEE 473
>gi|392349224|ref|XP_003750326.1| PREDICTED: one cut domain family member 3-like [Rattus norvegicus]
Length = 491
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ D ++++ PKK RLVFTDLQRRTL AI
Sbjct: 372 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-DQQKERALQPKKQRLVFTDLQRRTLIAI 430
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ TI++QLGLE TV NFFMNARRR M++W ++
Sbjct: 431 FKENKRPSKEMQATISQQLGLELNTVSNFFMNARRRCMNRWAEE 474
>gi|449279578|gb|EMC87150.1| One cut domain family member 2, partial [Columba livia]
Length = 271
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + +D+S PKK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE
Sbjct: 202 ACKRKEQ-EQQKDRSLQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQMTISQQLGLELN 260
Query: 87 TVGNFFMNARR 97
TV NFFMNARR
Sbjct: 261 TVSNFFMNARR 271
>gi|431922230|gb|ELK19321.1| One cut domain family member 3, partial [Pteropus alecto]
Length = 401
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ + ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE
Sbjct: 89 ACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELN 147
Query: 87 TVGNFFMNARRR 98
TV NFFMNARRR
Sbjct: 148 TVSNFFMNARRR 159
>gi|350580762|ref|XP_003123062.3| PREDICTED: one cut domain family member 3-like [Sus scrofa]
Length = 415
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/101 (56%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 295 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAI 353
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKW 103
FKE KRPSKEMQVTI++QLGLE TV NFFMNARRR M++W
Sbjct: 354 FKENKRPSKEMQVTISQQLGLELNTVSNFFMNARRRCMNRW 394
>gi|449514858|ref|XP_002186674.2| PREDICTED: one cut domain family member 2 [Taeniopygia guttata]
Length = 539
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/104 (56%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + +++++++ KK RLVFTDLQRRTL AI
Sbjct: 421 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EPNKERNNSQKKSRLVFTDLQRRTLFAI 479
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
FKE KRPSKEMQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 480 FKENKRPSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 523
>gi|322797316|gb|EFZ19434.1| hypothetical protein SINV_06177 [Solenopsis invicta]
Length = 82
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/45 (95%), Positives = 45/45 (100%)
Query: 64 KETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDP 108
+ETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKD+DP
Sbjct: 13 QETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDP 57
>gi|426386521|ref|XP_004059732.1| PREDICTED: uncharacterized protein LOC101132668 [Gorilla gorilla
gorilla]
Length = 844
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 724 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAI 782
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQVTI++QLGLE TV NFFMNARRR M++W ++ P
Sbjct: 783 FKENKRPSKEMQVTISQQLGLELNTVSNFFMNARRRCMNRWAEEPSTAP 831
>gi|402594547|gb|EJW88473.1| CUT domain-containing protein [Wuchereria bancrofti]
Length = 567
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 39 DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
D S K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV NFFMNARRR
Sbjct: 284 DGLSNTKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLQLDLSTVANFFMNARRR 343
Query: 99 SMDKWKDDDPPKP 111
S D P P
Sbjct: 344 SRSGPLMGDAPAP 356
>gi|308502530|ref|XP_003113449.1| CRE-CEH-38 protein [Caenorhabditis remanei]
gi|308263408|gb|EFP07361.1| CRE-CEH-38 protein [Caenorhabditis remanei]
Length = 510
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%)
Query: 36 ISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNA 95
+S K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV NFFMNA
Sbjct: 415 VSDHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNA 474
Query: 96 RRRSMDKWKDDDP 108
RRRS D+P
Sbjct: 475 RRRSRLGGNIDEP 487
>gi|403274062|ref|XP_003928808.1| PREDICTED: uncharacterized protein LOC101036540 [Saimiri
boliviensis boliviensis]
Length = 803
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 683 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAI 741
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP 111
FKE KRPSKEMQVTI++QLGLE TV NFFMNARRR M++W ++ P
Sbjct: 742 FKENKRPSKEMQVTISQQLGLELNTVSNFFMNARRRCMNRWAEEPSTAP 790
>gi|344243413|gb|EGV99516.1| One cut domain family member 3 [Cricetulus griseus]
Length = 170
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
CKRKE+ D ++++ PKK RLV T L AIFKE KRPSKEMQ TI++QLGLE
Sbjct: 80 ACKRKEQ-DQQKERALQPKKQRLVVTPLI-----AIFKENKRPSKEMQATISQQLGLELN 133
Query: 87 TVGNFFMNARRRSMDKWKDDDPPKP 111
TV NFFMNARRR M++W ++ P
Sbjct: 134 TVSNFFMNARRRCMNRWAEEPGATP 158
>gi|449491615|ref|XP_002190661.2| PREDICTED: one cut domain family member 2-like [Taeniopygia
guttata]
Length = 413
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CK KE+ + +D+S PKK RLVFTDLQRRTL AI
Sbjct: 320 ETFRRMWKWLQEPEFQRMSALRLAACKPKEQ-EQQKDRSLQPKKQRLVFTDLQRRTLIAI 378
Query: 63 FKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
FKE KRPSKEMQ+TI++QLGLE TV NFFMNARR
Sbjct: 379 FKENKRPSKEMQMTISQQLGLELNTVSNFFMNARR 413
>gi|324504819|gb|ADY42077.1| Homeobox protein ceh-38 [Ascaris suum]
Length = 766
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/70 (65%), Positives = 54/70 (77%)
Query: 42 STPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMD 101
S+ K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV NFFMNARRRS
Sbjct: 500 SSTKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRS 559
Query: 102 KWKDDDPPKP 111
D P P
Sbjct: 560 GPLVGDAPAP 569
>gi|312378316|gb|EFR24929.1| hypothetical protein AND_10175 [Anopheles darlingi]
Length = 705
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/46 (91%), Positives = 43/46 (93%)
Query: 65 ETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPK 110
ETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKD+ K
Sbjct: 615 ETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDESSMK 660
>gi|324509293|gb|ADY43913.1| Homeobox protein ceh-38 [Ascaris suum]
Length = 586
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/70 (65%), Positives = 54/70 (77%)
Query: 42 STPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMD 101
S+ K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV NFFMNARRRS
Sbjct: 320 SSTKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRS 379
Query: 102 KWKDDDPPKP 111
D P P
Sbjct: 380 GPLVGDAPAP 389
>gi|341899848|gb|EGT55783.1| CBN-CEH-38 protein [Caenorhabditis brenneri]
Length = 639
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/79 (58%), Positives = 56/79 (70%)
Query: 30 RKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVG 89
R S+ + K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV
Sbjct: 426 RTHRKSTSEQEGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVA 485
Query: 90 NFFMNARRRSMDKWKDDDP 108
NFFMNARRRS D+P
Sbjct: 486 NFFMNARRRSRLGGNIDEP 504
>gi|391326747|ref|XP_003737873.1| PREDICTED: one cut domain family member 2-like [Metaseiulus
occidentalis]
Length = 487
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 49/67 (73%)
Query: 40 QSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
QS ++P +R AIFKETKRPSKEMQ+ I++QLGLE +TVGNFFMNARRRS
Sbjct: 364 QSQRIRRPFFPHVQTERGQSVAIFKETKRPSKEMQIAISQQLGLELSTVGNFFMNARRRS 423
Query: 100 MDKWKDD 106
DKW DD
Sbjct: 424 QDKWLDD 430
>gi|170590954|ref|XP_001900236.1| CUT domain containing protein [Brugia malayi]
gi|158592386|gb|EDP30986.1| CUT domain containing protein [Brugia malayi]
Length = 720
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/73 (64%), Positives = 55/73 (75%)
Query: 39 DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
D S+ K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV NFFMNARRR
Sbjct: 437 DGLSSTKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLQLDLSTVANFFMNARRR 496
Query: 99 SMDKWKDDDPPKP 111
S D P P
Sbjct: 497 SRSGPLMGDAPAP 509
>gi|268530666|ref|XP_002630459.1| C. briggsae CBR-CEH-38 protein [Caenorhabditis briggsae]
Length = 626
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/79 (59%), Positives = 56/79 (70%)
Query: 30 RKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVG 89
R S T K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV
Sbjct: 400 RTHRRSTSDHDGQTSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVA 459
Query: 90 NFFMNARRRSMDKWKDDDP 108
NFFMNARRRS +D+P
Sbjct: 460 NFFMNARRRSRLGVGNDEP 478
>gi|312084474|ref|XP_003144290.1| hypothetical protein LOAG_08712 [Loa loa]
gi|307760546|gb|EFO19780.1| hypothetical protein LOAG_08712 [Loa loa]
Length = 751
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 53/73 (72%)
Query: 39 DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
D K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV NFFMNARRR
Sbjct: 468 DGLGNTKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLQLDLSTVANFFMNARRR 527
Query: 99 SMDKWKDDDPPKP 111
S D P P
Sbjct: 528 SRSGPLMGDAPAP 540
>gi|25147950|ref|NP_741018.1| Protein CEH-38, isoform a [Caenorhabditis elegans]
gi|373218560|emb|CCD61546.1| Protein CEH-38, isoform a [Caenorhabditis elegans]
Length = 632
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/79 (58%), Positives = 54/79 (68%)
Query: 30 RKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVG 89
R S K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV
Sbjct: 404 RTHRRSTSDHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVA 463
Query: 90 NFFMNARRRSMDKWKDDDP 108
NFFMNARRRS D+P
Sbjct: 464 NFFMNARRRSRLGGNIDEP 482
>gi|25147952|ref|NP_741017.1| Protein CEH-38, isoform b [Caenorhabditis elegans]
gi|21264445|sp|Q19720.2|HM38_CAEEL RecName: Full=Homeobox protein ceh-38
gi|373218561|emb|CCD61547.1| Protein CEH-38, isoform b [Caenorhabditis elegans]
Length = 641
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/79 (58%), Positives = 54/79 (68%)
Query: 30 RKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVG 89
R S K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV
Sbjct: 413 RTHRRSTSDHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVA 472
Query: 90 NFFMNARRRSMDKWKDDDP 108
NFFMNARRRS D+P
Sbjct: 473 NFFMNARRRSRLGGNIDEP 491
>gi|7499644|pir||T16136 hypothetical protein F22D3.1 - Caenorhabditis elegans
Length = 644
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/79 (58%), Positives = 54/79 (68%)
Query: 30 RKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVG 89
R S K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV
Sbjct: 416 RTHRRSTSDHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVA 475
Query: 90 NFFMNARRRSMDKWKDDDP 108
NFFMNARRRS D+P
Sbjct: 476 NFFMNARRRSRLGGNIDEP 494
>gi|47228342|emb|CAG07737.1| unnamed protein product [Tetraodon nigroviridis]
Length = 490
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 56 RRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKW 103
RRTL AIF+E +RPSKEMQVTI++QLGLE +TV NFFMN+RRR D+W
Sbjct: 443 RRTLVAIFRENRRPSKEMQVTISQQLGLELSTVSNFFMNSRRRCPDRW 490
>gi|156395336|ref|XP_001637067.1| predicted protein [Nematostella vectensis]
gi|156224176|gb|EDO45004.1| predicted protein [Nematostella vectensis]
Length = 177
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S +++ KK R FT+ Q+RTL AIFKETK+P+K+MQ +A +LGL+ +V NFFMNAR
Sbjct: 112 SDVEAAPSKKIRRQFTETQKRTLFAIFKETKKPTKDMQKAVAEELGLDLNSVANFFMNAR 171
Query: 97 RRSMD 101
RR D
Sbjct: 172 RRHTD 176
>gi|170572832|ref|XP_001892250.1| Homeobox protein onecut [Brugia malayi]
gi|158602517|gb|EDP38928.1| Homeobox protein onecut, putative [Brugia malayi]
Length = 143
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 61 AIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
AIFKETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR D+
Sbjct: 39 AIFKETKRPSREMQLTISQQLQLDPTTVANFFMNARRRGHDR 80
>gi|110339175|gb|ABG67851.1| HNF6, partial [Nematostella vectensis]
Length = 61
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMD 101
KK R FT+ Q+RTL AIFKETK+P+K+MQ +A +LGL+ +V NFFMNARRR D
Sbjct: 4 KKIRRQFTETQKRTLFAIFKETKKPTKDMQKAVAEELGLDLNSVANFFMNARRRHTD 60
>gi|402585484|gb|EJW79424.1| hepatocyte nuclear factor 6 alpha, partial [Wuchereria bancrofti]
Length = 107
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 61 AIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
AIFKETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR D+
Sbjct: 1 AIFKETKRPSREMQLTISQQLQLDPTTVANFFMNARRRGHDR 42
>gi|312105534|ref|XP_003150523.1| homeobox protein onecut [Loa loa]
Length = 124
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 61 AIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
AIFKETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR D+
Sbjct: 5 AIFKETKRPSREMQLTISQQLQLDPTTVANFFMNARRRGHDR 46
>gi|47184007|emb|CAG14149.1| unnamed protein product [Tetraodon nigroviridis]
Length = 54
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 67 KRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPK 110
+RPSKE+QVTI++QLGLE +TV NFFMNARRR+++KW D+ P
Sbjct: 6 QRPSKELQVTISQQLGLELSTVSNFFMNARRRNLNKWADEGRPS 49
>gi|341886192|gb|EGT42127.1| hypothetical protein CAEBREN_14492 [Caenorhabditis brenneri]
Length = 484
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PKK R+VFT+ Q+RTL+ +FKE KRPS+E + IA LGLE T + NFF NARRR
Sbjct: 426 PKKARVVFTETQKRTLERVFKEVKRPSRESKQQIADHLGLEFTQIDNFFQNARRR 480
>gi|56791838|gb|AAW30420.1| HNF6b [Oikopleura dioica]
gi|313234542|emb|CBY10499.1| unnamed protein product [Oikopleura dioica]
Length = 335
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
KK R +FTD QRR L ++FK RP+KE Q+ +A +L LE +TV NFFMNARRR
Sbjct: 277 KKIRRIFTDAQRRILHSVFKTNNRPTKEHQMALAEELNLELSTVSNFFMNARRR 330
>gi|341902545|gb|EGT58480.1| hypothetical protein CAEBREN_20520 [Caenorhabditis brenneri]
Length = 251
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 5/61 (8%)
Query: 40 QSSTP-----KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
QSS+P KKPRLVFT+ Q+ TL +F+ET+RPS +MQ IA L L +TV NFFMN
Sbjct: 170 QSSSPGESSAKKPRLVFTECQKNTLVKVFEETQRPSFQMQKLIADHLHLHVSTVSNFFMN 229
Query: 95 A 95
A
Sbjct: 230 A 230
>gi|341875995|gb|EGT31930.1| hypothetical protein CAEBREN_00529 [Caenorhabditis brenneri]
Length = 233
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 42 STPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
S PKKPRLVFT+ Q+ L +FKET+RPS +MQ IA L L+ +TV NFFMN
Sbjct: 159 SAPKKPRLVFTETQKNALVKVFKETERPSSKMQKVIADHLHLDVSTVNNFFMN 211
>gi|344243528|gb|EGV99631.1| One cut domain family member 2 [Cricetulus griseus]
Length = 50
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 32/34 (94%)
Query: 73 MQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
MQ+TI++QLGLE TTV NFFMNARRRS++KW+DD
Sbjct: 1 MQITISQQLGLELTTVSNFFMNARRRSLEKWQDD 34
>gi|345787390|ref|XP_855080.2| PREDICTED: one cut domain family member 3 [Canis lupus familiaris]
Length = 488
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ K ++ + ++ + CKRKE+ + ++++ PKK RLVFTDLQRRTL AI
Sbjct: 371 ETFRRMWKWLQEPEFQRMSALRLAACKRKEQ-EQQKERALQPKKQRLVFTDLQRRTLIAI 429
Query: 63 FKETKRPSKEMQVTIARQLGLE 84
FKE KRPSKEM V + R+ G E
Sbjct: 430 FKENKRPSKEM-VCVQRREGGE 450
>gi|308462763|ref|XP_003093662.1| hypothetical protein CRE_29190 [Caenorhabditis remanei]
gi|308249526|gb|EFO93478.1| hypothetical protein CRE_29190 [Caenorhabditis remanei]
Length = 280
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 41/56 (73%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
P K R VF+++Q+ TL ++FK+ + P +E +V IA+QL L+ + V +FMNARRR+
Sbjct: 213 PTKKRFVFSEMQKNTLDSLFKQERNPDQETKVDIAQQLNLDISQVNTYFMNARRRN 268
>gi|268571659|ref|XP_002648778.1| Hypothetical protein CBG11796 [Caenorhabditis briggsae]
Length = 419
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
K R VFT Q++TLQ+++K T+RP++EM +A L + TV NFFMNARRR
Sbjct: 330 KVARFVFTTHQKQTLQSVYKITQRPTREMHQKLADYLEISIETVENFFMNARRR 383
>gi|268534922|ref|XP_002632594.1| Hypothetical protein CBG13862 [Caenorhabditis briggsae]
Length = 602
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S D+ ST K+ R FT++QR+ L+A++++T RP+ + TIA +L L+ TTV N+F N R
Sbjct: 84 STDEPSTTKRARTEFTNVQRQVLEALYEQTDRPTADEIQTIAEKLDLDETTVSNYFQNTR 143
Query: 97 RRS 99
R+
Sbjct: 144 TRN 146
>gi|268534924|ref|XP_002632595.1| Hypothetical protein CBG13865 [Caenorhabditis briggsae]
Length = 509
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKKPR FT +Q+ LQ IF+E +PS ++ IA+ L L+ +V NFF N R+R+ D+
Sbjct: 427 APKKPRTEFTPVQKGALQTIFEENPKPSADVMAHIAQTLELDNDSVANFFQNTRKRTNDQ 486
Query: 103 WK 104
K
Sbjct: 487 MK 488
>gi|268571617|ref|XP_002648769.1| Hypothetical protein CBG10702 [Caenorhabditis briggsae]
Length = 419
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 36 ISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNA 95
++ D++ K R VFT Q++TLQ+++K + RP++EMQ +A L + TV NFFMN+
Sbjct: 321 MNSDENEPTKVSRFVFTAHQKQTLQSMYKISSRPTREMQQKLADHLEISMETVENFFMNS 380
Query: 96 RRRSMDKWKDDDPP 109
RRR D++++ P
Sbjct: 381 RRR--DRYREATQP 392
>gi|341879599|gb|EGT35534.1| hypothetical protein CAEBREN_18017 [Caenorhabditis brenneri]
Length = 272
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 27 TCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPT 86
T RK P QD+S ++ R VFT++QR L +FKET PS M+ +A LGLE T
Sbjct: 196 TPTRKSPP--GQDES---ERTREVFTEIQRTILDRLFKETAWPSTRMKDMLADHLGLEFT 250
Query: 87 TVGNFFMNARRRSMDKWKDDD 107
+ NFF NARRR DDD
Sbjct: 251 QIDNFFKNARRRRPRLVNDDD 271
>gi|308466097|ref|XP_003095304.1| hypothetical protein CRE_19941 [Caenorhabditis remanei]
gi|308245482|gb|EFO89434.1| hypothetical protein CRE_19941 [Caenorhabditis remanei]
Length = 415
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 6/64 (9%)
Query: 41 SSTPKKP------RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
SST KP R FT +Q++TL+A FK PS+E++V IA QL ++ + V NFF N
Sbjct: 329 SSTKLKPYSKSRERFFFTLVQKKTLEAFFKSHPNPSEELKVAIAEQLKIDLSQVSNFFFN 388
Query: 95 ARRR 98
+RRR
Sbjct: 389 SRRR 392
>gi|25148837|ref|NP_508341.2| Protein CEH-21 [Caenorhabditis elegans]
gi|21431779|sp|Q22811.3|HM21_CAEEL RecName: Full=Homeobox protein ceh-21
gi|18157195|emb|CAD20808.1| CEH-21 protein [Caenorhabditis elegans]
gi|351057922|emb|CCD64528.1| Protein CEH-21 [Caenorhabditis elegans]
Length = 495
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
T K RL FT+ Q ++LQ F++ RP++EM+ ++ L L+ +TVGNFFMN+RRR
Sbjct: 390 TVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTVGNFFMNSRRR 445
>gi|149034538|gb|EDL89275.1| rCG29199 [Rattus norvegicus]
Length = 51
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 73 MQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDD 106
MQ TI++QLGLE TV NFFMNARRR M++W ++
Sbjct: 1 MQATISQQLGLELNTVSNFFMNARRRCMNRWAEE 34
>gi|17551242|ref|NP_508342.1| Protein CEH-39 [Caenorhabditis elegans]
gi|13627102|sp|Q22812.1|HM39_CAEEL RecName: Full=Homeobox protein ceh-39
gi|351057923|emb|CCD64529.1| Protein CEH-39 [Caenorhabditis elegans]
Length = 399
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 48 RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
R FT Q +L +F++ RP++EMQ ++ L L +TVGNFFMNARRR
Sbjct: 321 RFTFTQTQLDSLHTVFQQQDRPNREMQQALSATLKLNRSTVGNFFMNARRR 371
>gi|268562928|ref|XP_002646811.1| Hypothetical protein CBG19489 [Caenorhabditis briggsae]
Length = 717
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWK 104
KKPR VF +Q+ LQ+IF+E +PS ++ IA+ L L+ +V NFF N R+R+ D+ K
Sbjct: 637 KKPRTVFFPVQKSALQSIFEENPKPSADVMAHIAQTLELDNDSVVNFFQNTRKRTNDQMK 696
>gi|2605704|gb|AAB86814.1| CEH-21 [Caenorhabditis elegans]
Length = 183
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
T K RL FT+ Q ++LQ F++ RP++EM+ ++ L L+ +TVGNFFMN+RRR
Sbjct: 78 TVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTVGNFFMNSRRR 133
>gi|268562924|ref|XP_002646810.1| Hypothetical protein CBG19488 [Caenorhabditis briggsae]
Length = 668
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
KKPR F +QR LQ IF+E +PS ++ IAR L L+ V NFF N R+R+ D+
Sbjct: 596 KKPRTEFHPVQRSALQTIFEENPKPSADVMAHIARNLKLDIGAVENFFQNTRKRTNDQ 653
>gi|308462791|ref|XP_003093676.1| hypothetical protein CRE_29192 [Caenorhabditis remanei]
gi|308249540|gb|EFO93492.1| hypothetical protein CRE_29192 [Caenorhabditis remanei]
Length = 462
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S D ++ P K R F+ Q+ TL+AIFK +RP + + A +L L+ V +FMNAR
Sbjct: 386 SSDATTKPIKKRFQFSQHQKETLEAIFKIERRPDQRIMAVTAEKLNLDFIQVHTYFMNAR 445
Query: 97 RRSMDKWKDD 106
RRS ++ DD
Sbjct: 446 RRS--RFADD 453
>gi|308455341|ref|XP_003090217.1| hypothetical protein CRE_03526 [Caenorhabditis remanei]
gi|308265840|gb|EFP09793.1| hypothetical protein CRE_03526 [Caenorhabditis remanei]
Length = 153
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 32 EEPDISQDQS--STPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVG 89
E+ D S+ S S P K R F+ Q+ TL+AIF +RP + + A +L L+ V
Sbjct: 70 EKTDFSEKSSDASKPTKKRFQFSQHQKDTLEAIFNIERRPDQRIMAVTAEKLNLDFIQVH 129
Query: 90 NFFMNARRRSMDKWKDD 106
+FMNARRRS ++ DD
Sbjct: 130 TYFMNARRRS--RFADD 144
>gi|341901473|gb|EGT57408.1| hypothetical protein CAEBREN_24852 [Caenorhabditis brenneri]
Length = 409
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 41 SSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
S K + VF+D Q+ L+A+FK+ + P K Q +A +L LE TV NFF NARRR
Sbjct: 349 SGEEPKKKFVFSDYQKSVLEAVFKQNRNPKKLEQQQLAEELKLEFKTVKNFFDNARRR 406
>gi|17556164|ref|NP_497576.1| Protein CEH-44, isoform a [Caenorhabditis elegans]
gi|75021616|sp|Q9BL02.1|CUT_CAEEL RecName: Full=Homeobox protein cut-like ceh-44; Short=Homeobox
protein 44
gi|373254568|emb|CCD73822.1| Protein CEH-44, isoform a [Caenorhabditis elegans]
Length = 1273
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 1 MVEKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKP--RLVFTDLQRRT 58
+VEK KE K K + ++ + KRK D + D KKP R V TD Q+ T
Sbjct: 1059 LVEKEESKETVKAKIESVPAPREAPRPVKRKHSSD-TDDYDLNTKKPIQRTVITDYQKDT 1117
Query: 59 LQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
L+ +F + PS E+ I+ +L + TV N+F N R RS
Sbjct: 1118 LRFVFVNEQHPSNELCEQISLKLDMSLRTVQNWFHNHRTRS 1158
>gi|332030392|gb|EGI70099.1| Homeobox protein onecut [Acromyrmex echinatior]
Length = 56
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFK 64
++ Q PKKPRLVFTDLQRRTLQAIFK
Sbjct: 5 AEHQQPAPKKPRLVFTDLQRRTLQAIFK 32
>gi|432856535|ref|XP_004068463.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 348
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 17 KKKKKKKKKKTCKRKEEPDISQDQSST-PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQV 75
K ++++ + K ++P S DQ + PK+PR + T QRRT +A F+ + +P ++++
Sbjct: 144 KSGDDEEEEPSAKVMDKPGRSHDQENKRPKRPRTILTTQQRRTFKASFEVSSKPCRKVRE 203
Query: 76 TIARQLGLEPTTVGNFFMNARRR 98
T+A + GL V +F N R +
Sbjct: 204 TLAAETGLSVRVVQVWFQNQRAK 226
>gi|326667506|ref|XP_690156.5| PREDICTED: sb:cb1008 [Danio rerio]
Length = 642
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 6 RKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKE 65
+K KKK ++ + K+ + C+ E D+ + K+PR+V + +++TL + ++
Sbjct: 481 QKLNAKKKSDQRARLKRDSQSVCEALECGDVWR--VDALKRPRVVLSVQEKQTLFSAYEL 538
Query: 66 TKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PS+ +A QLGL+ +TV N+F N R R
Sbjct: 539 EPYPSQNTIDRLAAQLGLQTSTVSNWFYNYRSR 571
>gi|268533570|ref|XP_002631913.1| Hypothetical protein CBG07897 [Caenorhabditis briggsae]
Length = 483
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
PKK R F + + L+ I+ E +PS EM IA L L+ +V NFF N RRR+
Sbjct: 403 APKKARTEFHPVTKNALKTIYDEDPKPSSEMLGIIAETLKLDKRSVTNFFQNTRRRT 459
>gi|308501371|ref|XP_003112870.1| CRE-CEH-44 protein [Caenorhabditis remanei]
gi|308265171|gb|EFP09124.1| CRE-CEH-44 protein [Caenorhabditis remanei]
Length = 1461
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 14 KKKKKKKKKKKKKTCKRKEEP-----DISQDQSSTPKKP--RLVFTDLQRRTLQAIFKET 66
KK++ K K+K C +E P S D + KKP R V TD Q+ L+ +F
Sbjct: 1052 KKEEAKDSVKEKLECLLRETPRPVKRKASSDLEDSEKKPIQRTVITDYQKDVLRFVFVNE 1111
Query: 67 KRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
PS EM I+ +L + TV N+F N R RS
Sbjct: 1112 LHPSNEMCEQISTKLDMSLRTVQNWFHNHRTRS 1144
>gi|410921390|ref|XP_003974166.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Takifugu
rubripes]
Length = 354
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+ S PK+PR + T QRRT +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 166 EQDSKRPKRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRA 225
Query: 98 R 98
+
Sbjct: 226 K 226
>gi|268534632|ref|XP_002632447.1| Hypothetical protein CBG13668 [Caenorhabditis briggsae]
Length = 688
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 48 RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMD 101
RLVFTD Q+ L FK P E +A +L L+ TV NFF+N RRR D
Sbjct: 584 RLVFTDTQKAKLVDSFKRNPNPPPEHMAQLAVRLHLDLPTVRNFFVNYRRRLKD 637
>gi|348505058|ref|XP_003440078.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 361
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 40 QSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
+S PK+PR + T QRRT +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 171 ESKRPKRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 229
>gi|341877743|gb|EGT33678.1| hypothetical protein CAEBREN_06506 [Caenorhabditis brenneri]
Length = 1278
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 28 CKRKEEPDISQDQSSTPKKP--RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
KRK D +D KKP R V TD Q+ TL+ +F PS E+ IA +L +
Sbjct: 1088 VKRKASSDF-EDYEPNGKKPIQRTVITDYQKDTLRFVFVNELHPSNELCEQIALKLDMSL 1146
Query: 86 TTVGNFFMNARRRS 99
TV N+F N R RS
Sbjct: 1147 RTVQNWFHNHRTRS 1160
>gi|91077954|ref|XP_967240.1| PREDICTED: similar to CG32105 CG32105-PB [Tribolium castaneum]
Length = 472
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 32 EEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNF 91
+E +D PK+PR + T QRR +A F+ + +P ++++ +A++ GL V +
Sbjct: 260 DENSRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKETGLSVRVVQVW 319
Query: 92 FMNAR---RRSMDKWKDDDPPKP 111
F N R ++ K K DD P
Sbjct: 320 FQNQRAKMKKIQRKAKQDDGKSP 342
>gi|353237666|emb|CCA69634.1| hypothetical protein PIIN_03573 [Piriformospora indica DSM 11827]
Length = 259
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 41 SSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
S T +K R +FTD Q++ L A + K P+ + +A+QLGL P V N+F + R+R
Sbjct: 38 SLTSRKNRTIFTDEQQKGLYAAYDIDKYPTTLQKELLAQQLGLPPVVVVNWFQHKRQR 95
>gi|270002859|gb|EEZ99306.1| LIM homeobox transcription factor 1, beta [Tribolium castaneum]
Length = 388
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 32 EEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNF 91
+E +D PK+PR + T QRR +A F+ + +P ++++ +A++ GL V +
Sbjct: 176 DENSRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKETGLSVRVVQVW 235
Query: 92 FMNAR---RRSMDKWKDDDPPKP 111
F N R ++ K K DD P
Sbjct: 236 FQNQRAKMKKIQRKAKQDDGKSP 258
>gi|328715997|ref|XP_001946565.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 407
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D PK+PR + T +QRR +A F+ + +P ++++ +A+ GL V +F N R
Sbjct: 178 RDGRRGPKRPRTILTSVQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRA 237
Query: 98 R 98
+
Sbjct: 238 K 238
>gi|118344350|ref|NP_001071998.1| transcription factor protein [Ciona intestinalis]
gi|70570117|dbj|BAE06539.1| transcription factor protein [Ciona intestinalis]
Length = 505
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 20 KKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIAR 79
+ K KT + ++ D + K+PR + T QRR +A F+ +++P ++++ T+A
Sbjct: 223 RSKNGSKTSPTMQHGSVTSDGKRS-KRPRTILTTAQRRKFKASFEVSQKPCRKVRETLAS 281
Query: 80 QLGLEPTTVGNFFMNARRR 98
+ GL P V +F N R +
Sbjct: 282 ETGLSPRVVQVWFQNQRAK 300
>gi|432889048|ref|XP_004075119.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 357
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRRT +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 225 PKRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 279
>gi|268535068|ref|XP_002632667.1| Hypothetical protein CBG21591 [Caenorhabditis briggsae]
Length = 338
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 24 KKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL 83
+KKT ++ E +Q S KK R FT Q + L+ +FK + P+ + ++A+ L L
Sbjct: 263 EKKTYLKRIEKMENQPVESEEKKTRTKFTKYQEKALEEVFKLCQCPTTLTKRSLAKDLNL 322
Query: 84 EPTTVGNFFMNARRR 98
+ N+F+N RRR
Sbjct: 323 PFVVIQNYFLNHRRR 337
>gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domuncula]
Length = 342
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 24 KKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL 83
KK CK E ++D + K+PR T Q TL+A + + +PS+ ++ +A + GL
Sbjct: 225 KKLVCKADYEAARAKDGNQ--KRPRTTITSKQLDTLKAAYTVSSKPSRAVREQLANETGL 282
Query: 84 EPTTVGNFFMNARRRSMDKWKDDDPPKP 111
E V +F N R + K DD P
Sbjct: 283 EVRVVQVWFQNRRAKDKRTTKGDDATSP 310
>gi|403168046|ref|XP_003327749.2| hypothetical protein PGTG_08516 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167326|gb|EFP83330.2| hypothetical protein PGTG_08516 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 566
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 29 KRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 88
K+ EE D S + K+ R + T Q+R L I ++T+ PS +++ +AR+LG+ P V
Sbjct: 159 KKNEENDSS---ALAKKRSRTLTTPSQQRRLMQILEQTRFPSTDVREQLARELGMTPRRV 215
Query: 89 GNFFMNARRRSMDK 102
+F N RR+ M K
Sbjct: 216 QIWFQN-RRQGMKK 228
>gi|341901463|gb|EGT57398.1| hypothetical protein CAEBREN_14784 [Caenorhabditis brenneri]
Length = 90
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 42 STPKKPR--LVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
++ KPR VF + Q+ L+A+F++ + P+ +A +L LE TV NFF NARRR
Sbjct: 29 TSGAKPRKKFVFGNHQKSVLKAVFQQNQNPTTLENQQLADELKLEFKTVKNFFDNARRR 87
>gi|357485047|ref|XP_003612811.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
gi|355514146|gb|AES95769.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
Length = 801
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 29 KRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTV 88
K E +I+ +Q +T KK T Q + ++A+FKE P + ++ ++ LGL+P V
Sbjct: 74 KSGNEQEINNEQQATKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDLGLKPRQV 133
Query: 89 GNFFMNARRRSMDKWKD 105
+F N RR M +D
Sbjct: 134 KFWFQN-RRTQMKAQQD 149
>gi|431916082|gb|ELK16336.1| LIM homeobox transcription factor 1-alpha [Pteropus alecto]
Length = 374
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 187 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 241
>gi|268562972|ref|XP_002646821.1| Hypothetical protein CBG19500 [Caenorhabditis briggsae]
Length = 234
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 42 STPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFF 92
S PK+ + FT++Q++ L AIF+ T++P +E I+ L LE TV N+F
Sbjct: 164 SKPKRRTMKFTEVQKKALNAIFEVTEKPPRETMQMISEHLQLEFKTVLNYF 214
>gi|157118344|ref|XP_001653181.1| lim homeobox protein [Aedes aegypti]
gi|108883304|gb|EAT47529.1| AAEL001373-PA [Aedes aegypti]
Length = 391
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S+D PK+PR + T +QRR +A F + +P ++++ +A+ GL V +F N R
Sbjct: 165 SRDGRRGPKRPRTILTSVQRRQFKASFDVSPKPCRKVREALAKDTGLSVRVVQVWFQNQR 224
Query: 97 RR 98
+
Sbjct: 225 AK 226
>gi|308449490|ref|XP_003087978.1| hypothetical protein CRE_10776 [Caenorhabditis remanei]
gi|308250661|gb|EFO94613.1| hypothetical protein CRE_10776 [Caenorhabditis remanei]
Length = 306
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
KKPR F+ Q L I++ RP KE+ +A + L + +FF+N RRR+
Sbjct: 247 KKPRFTFSKEQMVVLMGIYEINDRPGKELIEELAAKFSLSFNQIKDFFLNRRRRA 301
>gi|126306172|ref|XP_001363612.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Monodelphis
domestica]
Length = 382
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|311253923|ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
scrofa]
Length = 382
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 31 KEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGN 90
K P+ +D PK+PR + T QRR +A F+ + +P ++++ T+A + GL V
Sbjct: 183 KGAPEDGKDHKR-PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQV 241
Query: 91 FFMNARRR 98
+F N R +
Sbjct: 242 WFQNQRAK 249
>gi|241811703|ref|XP_002416452.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215510916|gb|EEC20369.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 155
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 33 EPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFF 92
+P + D PK+PR + T QRR +A F+ +++P ++++ T+A++ GL V +F
Sbjct: 75 QPAVRPDGRRGPKRPRTILTTAQRRAFKASFEISQKPCRKVRETLAKETGLSVRIVQVWF 134
Query: 93 MNAR 96
N R
Sbjct: 135 QNQR 138
>gi|28893581|ref|NP_796372.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|291327513|ref|NP_001167540.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|109019319|ref|XP_001084612.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Macaca mulatta]
gi|109019321|ref|XP_001084727.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Macaca mulatta]
gi|114561083|ref|XP_001174539.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
troglodytes]
gi|114561085|ref|XP_001174542.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3 [Pan
troglodytes]
gi|296229940|ref|XP_002760489.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Callithrix
jacchus]
gi|397508364|ref|XP_003824628.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1 [Pan
paniscus]
gi|397508366|ref|XP_003824629.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
paniscus]
gi|402858034|ref|XP_003893535.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Papio anubis]
gi|402858036|ref|XP_003893536.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Papio anubis]
gi|426332555|ref|XP_004027869.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Gorilla gorilla gorilla]
gi|426332557|ref|XP_004027870.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Gorilla gorilla gorilla]
gi|27923801|sp|Q8TE12.1|LMX1A_HUMAN RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|19879681|gb|AAL82892.1| LIM homeobox transcription factor 1 alpha [Homo sapiens]
gi|119611150|gb|EAW90744.1| LIM homeobox transcription factor 1, alpha, isoform CRA_b [Homo
sapiens]
gi|182887815|gb|AAI60062.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|193785405|dbj|BAG54558.1| unnamed protein product [Homo sapiens]
gi|208966672|dbj|BAG73350.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|355558990|gb|EHH15770.1| hypothetical protein EGK_01906 [Macaca mulatta]
gi|355746154|gb|EHH50779.1| hypothetical protein EGM_01656 [Macaca fascicularis]
Length = 382
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|410986575|ref|XP_003999585.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Felis catus]
Length = 382
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|354486854|ref|XP_003505592.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Cricetulus griseus]
Length = 382
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|344287033|ref|XP_003415260.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Loxodonta
africana]
Length = 382
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|302763529|ref|XP_002965186.1| hypothetical protein SELMODRAFT_230527 [Selaginella
moellendorffii]
gi|300167419|gb|EFJ34024.1| hypothetical protein SELMODRAFT_230527 [Selaginella
moellendorffii]
Length = 745
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 14 KKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRL-VFTDLQRRTLQAIFKETKRPSKE 72
K K K+ + + + + + S D+ P+K R T Q + ++++FKE P +
Sbjct: 16 KSKSKEDENESRSGSGSENMGNASGDEQEPPRKKRYHRHTARQIQEMESLFKECPHPDDK 75
Query: 73 MQVTIARQLGLEPTTVGNFFMNAR 96
+ ++R+LGLEP V +F N R
Sbjct: 76 QRQELSRELGLEPRQVKFWFQNRR 99
>gi|224058880|ref|XP_002190501.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Taeniopygia
guttata]
Length = 379
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 192 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 246
>gi|149755774|ref|XP_001493379.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Equus
caballus]
Length = 382
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|17551246|ref|NP_508340.1| Protein CEH-41 [Caenorhabditis elegans]
gi|351057921|emb|CCD64527.1| Protein CEH-41 [Caenorhabditis elegans]
Length = 278
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 41 SSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSM 100
SS PKK + FT+ + + A+F+ K P+ E +A QL L +V NFFMN R +
Sbjct: 208 SSPPKKTKSPFTEHEIAVMMALFEINKSPNHEEVQKLAVQLNLGYRSVANFFMNKRAKER 267
Query: 101 DKWKDDDP 108
K + P
Sbjct: 268 KKLQGHGP 275
>gi|547859|sp|Q04650.1|LMX1A_MESAU RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein LMX1A; Short=LIM/homeobox
protein 1; Short=LMX-1
gi|587461|emb|CAA57163.1| lmx1.1 [Mesocricetus auratus]
Length = 382
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|395825137|ref|XP_003785798.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Otolemur
garnettii]
Length = 382
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|350402518|ref|XP_003486514.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
impatiens]
Length = 402
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D PK+PR + T QRR +A F+ + +P ++++ +A++ GL V +F N R
Sbjct: 192 RDGRRGPKRPRTILTSAQRRQFKAAFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRA 251
Query: 98 R 98
+
Sbjct: 252 K 252
>gi|340711972|ref|XP_003394539.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
terrestris]
Length = 402
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D PK+PR + T QRR +A F+ + +P ++++ +A++ GL V +F N R
Sbjct: 192 RDGRRGPKRPRTILTSAQRRQFKAAFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRA 251
Query: 98 R 98
+
Sbjct: 252 K 252
>gi|158187529|ref|NP_001099437.2| LIM homeobox transcription factor 1 alpha [Rattus norvegicus]
Length = 382
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|17298670|ref|NP_387501.1| LIM homeobox transcription factor 1-alpha [Mus musculus]
gi|27923804|sp|Q9JKU8.1|LMX1A_MOUSE RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|7230571|gb|AAF43012.1|AF226662_1 lim homeodomain-containing transcription factor [Mus musculus]
gi|26336939|dbj|BAC32153.1| unnamed protein product [Mus musculus]
gi|80477081|gb|AAI09168.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
gi|80478204|gb|AAI09169.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 382
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|403272543|ref|XP_003928115.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403272545|ref|XP_003928116.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 382
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|345797790|ref|XP_851352.2| PREDICTED: LIM homeobox transcription factor 1-alpha [Canis lupus
familiaris]
Length = 382
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|301756737|ref|XP_002914217.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Ailuropoda melanoleuca]
Length = 382
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|291397514|ref|XP_002715925.1| PREDICTED: LIM homeobox transcription factor 1 alpha-like
[Oryctolagus cuniculus]
Length = 382
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|332220030|ref|XP_003259160.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Nomascus leucogenys]
Length = 368
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|300797454|ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus]
gi|296489924|tpg|DAA32037.1| TPA: LIM homeobox transcription factor 1 alpha-like [Bos taurus]
Length = 382
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|426217051|ref|XP_004002767.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Ovis aries]
Length = 382
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>gi|242007294|ref|XP_002424476.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
gi|212507894|gb|EEB11738.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
Length = 389
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D PK+PR + T QRR +A F+ + +P ++++ +A++ GL V +F N R
Sbjct: 166 RDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRA 225
Query: 98 R 98
+
Sbjct: 226 K 226
>gi|405977106|gb|EKC41572.1| Protein CASP [Crassostrea gigas]
Length = 1528
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 35 DISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
D S D S PK+PR+ FT+ Q+ L+ + + P++ +A +L + TV N+F N
Sbjct: 1199 DRSYDSPSMPKRPRVFFTEEQKDKLRMAYNQDPYPNQNTIEALANELNVGVKTVINWFHN 1258
Query: 95 ARRRS 99
R R+
Sbjct: 1259 HRMRA 1263
>gi|390345308|ref|XP_790548.3| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Strongylocentrotus purpuratus]
Length = 387
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
QD PK+PR + T QRR +A F+ + +P ++++ T+A++ GL V +F N R
Sbjct: 164 QDGRKGPKRPRTILTTSQRRAFKASFEVSSKPCRKVRETLAKETGLSVRVVQVWFQNQR 222
>gi|291388523|ref|XP_002710658.1| PREDICTED: divergent-paired related homeobox [Oryctolagus
cuniculus]
gi|291414282|ref|XP_002723387.1| PREDICTED: divergent-paired related homeobox [Oryctolagus
cuniculus]
Length = 190
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 48 RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
R VFTD Q L +F + P +++QV +A ++ ++PT V +F N R
Sbjct: 20 RTVFTDEQLEDLNILFSKNPYPDRDLQVEVASKMNIDPTVVQVWFKNHR 68
>gi|291407213|ref|XP_002720003.1| PREDICTED: divergent-paired related homeobox [Oryctolagus
cuniculus]
Length = 189
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 48 RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
R VFTD Q L +F + P +++QV +A ++ ++PT V +F N R
Sbjct: 20 RTVFTDEQLEDLNILFSKNPYPDRDLQVEVASKMNIDPTVVQVWFKNHR 68
>gi|268573146|ref|XP_002641550.1| C. briggsae CBR-CEH-44 protein [Caenorhabditis briggsae]
Length = 1309
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
KRK D+ S R V TD Q+ L+ +F P+ EM IA +L + T
Sbjct: 1119 VKRKASSDLEDYDPSKKAFQRTVITDYQKDVLRFVFVNELHPTNEMIEQIATKLEMSLRT 1178
Query: 88 VGNFFMNARRRS 99
V N+F N R RS
Sbjct: 1179 VQNWFHNHRTRS 1190
>gi|297662848|ref|XP_002809900.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Pongo abelii]
Length = 489
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 302 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 356
>gi|82621563|gb|ABB86453.1| NVHD115-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|110339051|gb|ABG67789.1| BSH-like 1, partial [Nematostella vectensis]
Length = 60
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWK 104
+K R VFTDLQ R L+ F E K + +A+ LGL T V +F N R KWK
Sbjct: 2 RKSRTVFTDLQLRVLEKTFSEQKYLDTSSRAKLAQTLGLNETQVKTWFQNRRM----KWK 57
>gi|308470403|ref|XP_003097435.1| hypothetical protein CRE_16983 [Caenorhabditis remanei]
gi|308240143|gb|EFO84095.1| hypothetical protein CRE_16983 [Caenorhabditis remanei]
Length = 368
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 47 PRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
R F+ Q L I++ RP KE+ +A + L P + +FF+N RRR+
Sbjct: 311 ARFTFSKEQMEVLMGIYEVNDRPGKELIEELAEKFSLSPNQIKDFFLNRRRRA 363
>gi|354507888|ref|XP_003515986.1| PREDICTED: LIM homeobox transcription factor 1-beta-like, partial
[Cricetulus griseus]
Length = 243
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 152 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 204
>gi|383792181|ref|NP_001244317.1| LIM homeobox transcription factor 1-alpha [Gallus gallus]
Length = 380
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 194 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 248
>gi|3046880|gb|AAC13544.1| LIM-homeodomain protein LMX1B/LMX1.2 [Homo sapiens]
Length = 161
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 102 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 154
>gi|156402173|ref|XP_001639465.1| predicted protein [Nematostella vectensis]
gi|156226594|gb|EDO47402.1| predicted protein [Nematostella vectensis]
Length = 60
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWK 104
+K R VFTDLQ R L+ F E K + +A+ LGL T V +F N R KWK
Sbjct: 3 RKSRTVFTDLQLRVLEKTFSEQKYLDTSSRAKLAQTLGLNETQVKTWFQNRRM----KWK 58
>gi|358332841|dbj|GAA31344.2| LIM/homeobox protein Lhx5 [Clonorchis sinensis]
Length = 455
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 30 RKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVG 89
+ E S T K+ R TD QR +Q +++ RPSKE + +A +LG+ V
Sbjct: 306 KSERLQTSTHVGGTSKRMRTSLTDDQRLHMQRVYESNPRPSKEAREKLANELGVPLRVVQ 365
Query: 90 NFFMNA----RRRSMDKWKDD 106
+F N RR S+ W +D
Sbjct: 366 VWFQNQRARDRRASVQNWSND 386
>gi|296482212|tpg|DAA24327.1| TPA: LIM homeobox transcription factor 1, beta-like [Bos taurus]
Length = 1019
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 12 KKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSK 71
K + + K K + + K D +D PK+PR + T QRR +A F+ + +P +
Sbjct: 805 KSEDEDGDMKPAKGQGSQSKGSGDDGKD-PRRPKRPRTILTTQQRRAFKASFEVSSKPCR 863
Query: 72 EMQVTIARQLGLEPTTVGNFFMNARRR 98
+++ T+A + GL V +F N R +
Sbjct: 864 KVRETLAAETGLSVRVVQVWFQNQRAK 890
>gi|149058121|gb|EDM09278.1| LIM homeobox transcription factor 1 alpha (predicted) [Rattus
norvegicus]
Length = 263
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR----- 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKLRQMV 254
Query: 99 -SMDKWK 104
+M WK
Sbjct: 255 VAMLAWK 261
>gi|449551341|gb|EMD42305.1| hypothetical protein CERSUDRAFT_110826 [Ceriporiopsis
subvermispora B]
Length = 546
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
QD+ PKKPR + Q L ++ + + PS E + ++A +LG+E TV ++F N R
Sbjct: 20 QDRKDQPKKPRHRHSAFQLAALNELYDKNEHPSLEERTSLAERLGMETKTVNSWFQNKR 78
>gi|332230039|ref|XP_003264194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Nomascus leucogenys]
Length = 408
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 225 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 279
>gi|313239088|emb|CBY14067.1| unnamed protein product [Oikopleura dioica]
Length = 260
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 EKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAI 62
E R+ +K ++ + ++ + CKRKE D + KKPRLVFTD QRR L +I
Sbjct: 98 ETFRRMKKWLQEPEYQRMAALRIAACKRKESGD--HKRPPVNKKPRLVFTDRQRRMLHSI 155
Query: 63 FK 64
FK
Sbjct: 156 FK 157
>gi|308220050|gb|ADO22597.1| ANTP class homeobox transcription factor ANTP25 [Mnemiopsis leidyi]
Length = 338
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKW 103
P+KPR FTD Q L+ +F++ K S + IA L L V N+F N R R W
Sbjct: 220 PRKPRTHFTDTQIEDLEKVFEDKKYLSANERQIIANDLNLHEEQVKNWFQNRRSR----W 275
Query: 104 KDD 106
+ D
Sbjct: 276 RKD 278
>gi|390458375|ref|XP_002743346.2| PREDICTED: LIM homeobox transcription factor 1-beta [Callithrix
jacchus]
Length = 638
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 455 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 509
>gi|345805844|ref|XP_003435360.1| PREDICTED: LIM homeobox transcription factor 1-beta [Canis lupus
familiaris]
Length = 487
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 12 KKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSK 71
K + + K K + + K D +D PK+PR + T QRR +A F+ + +P +
Sbjct: 273 KSEDEDGDMKPAKGQGSQSKGSGDDGKD-PRRPKRPRTILTTQQRRAFKASFEVSSKPCR 331
Query: 72 EMQVTIARQLGLEPTTVGNFFMNARRR 98
+++ T+A + GL V +F N R +
Sbjct: 332 KVRETLAAETGLSVRVVQVWFQNQRAK 358
>gi|268562964|ref|XP_002646819.1| Hypothetical protein CBG19497 [Caenorhabditis briggsae]
Length = 77
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 51 FTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFF 92
FT++Q++ L AIF+ T++PS+E I+ L LE TV N+F
Sbjct: 13 FTEVQKKALNAIFEVTEKPSRETIQMISEHLQLEFKTVLNYF 54
>gi|344235434|gb|EGV91537.1| LIM homeobox transcription factor 1-beta [Cricetulus griseus]
Length = 233
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 101 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 153
>gi|170064307|ref|XP_001867471.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167881733|gb|EDS45116.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 228
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 15 KKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKP-----RLVFTDLQRRTLQAIFKETKRP 69
+ ++ K K+ K + +P SQ +S +P R VFT+ Q+ +L+ +FK TK
Sbjct: 100 QNRRAKAKQVSSGWKERTQPSDSQAKSVVKVEPKSIRHRTVFTNTQQNSLEELFKTTKYL 159
Query: 70 SKEMQVTIARQLGLEPTTVGNFFMNARRR 98
S + IA L L P V +F N R R
Sbjct: 160 SFAERCEIASSLKLNPLQVQVWFQNRRAR 188
>gi|82621655|gb|ABB86499.1| NVHD097-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|110339055|gb|ABG67791.1| BSH-like 3, partial [Nematostella vectensis]
Length = 60
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWK 104
+K R VFTDLQ R L+ F E K + +A+ LGL T V +F N R KWK
Sbjct: 2 RKSRTVFTDLQLRVLEKTFSEQKYLDTSSRSKLAQTLGLNETQVKTWFQNRRM----KWK 57
>gi|444721284|gb|ELW62028.1| LIM homeobox transcription factor 1-beta [Tupaia chinensis]
Length = 471
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 12 KKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSK 71
K + + K K + + K D +D PK+PR + T QRR +A F+ + +P +
Sbjct: 84 KSEDEDGDMKPAKGQGSQNKGSGDDGKD-PRRPKRPRTILTTQQRRAFKASFEVSSKPCR 142
Query: 72 EMQVTIARQLGLEPTTVGNFFMNARRR 98
+++ T+A + GL V +F N R +
Sbjct: 143 KVRETLAAETGLSVRVVQVWFQNQRAK 169
>gi|156366929|ref|XP_001627173.1| predicted protein [Nematostella vectensis]
gi|156214075|gb|EDO35073.1| predicted protein [Nematostella vectensis]
Length = 80
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWK 104
+K R VFTDLQ R L+ F E K + +A+ LGL T V +F N R KWK
Sbjct: 17 RKSRTVFTDLQLRVLEKTFSEQKYLDTSSRSKLAQTLGLNETQVKTWFQNRRM----KWK 72
>gi|327291350|ref|XP_003230384.1| PREDICTED: LIM homeobox transcription factor 1-beta-like, partial
[Anolis carolinensis]
Length = 185
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 109 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 161
>gi|341879997|gb|EGT35932.1| hypothetical protein CAEBREN_04738 [Caenorhabditis brenneri]
Length = 371
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 39 DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
D T KKP+L F Q L+A F R +++ + +A QL LEP V N+FMN R+
Sbjct: 234 DDLRTQKKPKLKFEQWQLDVLEAQFAAKNRVTRKEKQRLAEQLKLEPIQVLNWFMNRRQ 292
>gi|308454598|ref|XP_003089910.1| hypothetical protein CRE_09896 [Caenorhabditis remanei]
gi|308267791|gb|EFP11744.1| hypothetical protein CRE_09896 [Caenorhabditis remanei]
Length = 306
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 48 RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
R F+ Q L I++ RP KE+ +A + L P + +FF+N RRR+
Sbjct: 250 RFTFSKEQMEVLMGIYEVNDRPGKELIKELAEKFSLSPNQIKDFFLNRRRRA 301
>gi|268535436|ref|XP_002632851.1| Hypothetical protein CBG15047 [Caenorhabditis briggsae]
Length = 351
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
KK R FT+ Q + L+A+F+ + P+ + ++A++L L + N+F+N RRR
Sbjct: 297 KKTRTKFTEYQEKALEAVFQLCQCPTTVTKRSLAKKLNLPFVVIQNYFLNHRRR 350
>gi|348569787|ref|XP_003470679.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Cavia
porcellus]
Length = 402
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|29500723|gb|AAO74860.1| LMX1B [Canis lupus familiaris]
Length = 309
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 137 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 189
>gi|359070468|ref|XP_002691651.2| PREDICTED: uncharacterized protein LOC100337389 [Bos taurus]
Length = 779
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 596 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 650
>gi|148707230|gb|EDL39177.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 352
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R ++
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKA 250
>gi|410979118|ref|XP_003995933.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 4
[Felis catus]
Length = 382
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|266265608|dbj|BAI49293.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
vulgare]
gi|266265610|dbj|BAI49294.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
vulgare]
gi|326512624|dbj|BAJ99667.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 28 CKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
C + + D PKK RL TD Q L+ F+E ++ +V +A +LGL+P
Sbjct: 41 CGGGDGDGVEMDGGGDPKKRRL--TDEQVEGLELSFREERKLETGRKVHLAAELGLDPKQ 98
Query: 88 VGNFFMNARRR 98
V +F N R R
Sbjct: 99 VAVWFQNRRAR 109
>gi|417410318|gb|JAA51634.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 391
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 215 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 267
>gi|68448499|ref|NP_001020339.1| LIM homeobox transcription factor 1, beta a [Danio rerio]
gi|62461839|gb|AAX83056.1| LIM homeodomain protein [Danio rerio]
gi|190337362|gb|AAI63321.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
gi|190339774|gb|AAI63333.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
Length = 373
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 190 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 242
>gi|385862228|ref|NP_001245353.1| LIM homeobox transcription factor 1-beta [Sus scrofa]
Length = 379
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens]
Length = 377
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 194 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 246
>gi|48375213|gb|AAT42259.1| LIM homeodomain protein Lmx1b.2 [Danio rerio]
Length = 375
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 192 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 244
>gi|417410392|gb|JAA51670.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 398
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 215 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 267
>gi|297685372|ref|XP_002820264.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Pongo abelii]
Length = 383
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|149038965|gb|EDL93185.1| LIM homeobox transcription factor 1 beta [Rattus norvegicus]
Length = 372
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|255759880|ref|NP_034855.2| LIM homeobox transcription factor 1-beta [Mus musculus]
gi|109112190|ref|XP_001097412.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Macaca mulatta]
gi|297685370|ref|XP_002820263.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Pongo abelii]
gi|395824199|ref|XP_003785358.1| PREDICTED: LIM homeobox transcription factor 1-beta [Otolemur
garnettii]
gi|403299811|ref|XP_003940668.1| PREDICTED: LIM homeobox transcription factor 1-beta [Saimiri
boliviensis boliviensis]
gi|410979114|ref|XP_003995931.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Felis catus]
gi|341940912|sp|O88609.2|LMX1B_MOUSE RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3132909|gb|AAC39738.1| LIM homeodomain protein LMX1B [Homo sapiens]
gi|47479658|gb|AAH69601.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|85567565|gb|AAI12121.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|109731283|gb|AAI13492.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|111600533|gb|AAI19170.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|116138517|gb|AAI25470.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|119608048|gb|EAW87642.1| LIM homeobox transcription factor 1, beta, isoform CRA_b [Homo
sapiens]
gi|148676655|gb|EDL08602.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|312150934|gb|ADQ31979.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|313882992|gb|ADR82982.1| LIM homeobox transcription factor 1, beta (LMX1B) [synthetic
construct]
Length = 372
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|344271900|ref|XP_003407775.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Loxodonta africana]
Length = 406
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|8247930|sp|O60663.2|LMX1B_HUMAN RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3335524|gb|AAC27294.1| LIM homeodomain protein [Homo sapiens]
gi|119608047|gb|EAW87641.1| LIM homeobox transcription factor 1, beta, isoform CRA_a [Homo
sapiens]
Length = 379
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|440898169|gb|ELR49722.1| LIM homeobox transcription factor 1-beta [Bos grunniens mutus]
Length = 392
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 209 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 261
>gi|3348118|gb|AAC27793.1| LIM homeodomain protein [Mus musculus]
Length = 372
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|293345851|ref|XP_001078699.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Rattus norvegicus]
gi|293357761|ref|XP_001069713.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Rattus norvegicus]
Length = 395
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|297271296|ref|XP_002800229.1| PREDICTED: LIM homeobox transcription factor 1-beta [Macaca
mulatta]
Length = 385
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|355763645|gb|EHH62200.1| LIM/homeobox protein LMX1B [Macaca fascicularis]
Length = 379
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 200 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 252
>gi|292494911|ref|NP_002307.2| LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
gi|301761898|ref|XP_002916367.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 2
[Ailuropoda melanoleuca]
gi|344271898|ref|XP_003407774.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Loxodonta africana]
gi|306921455|dbj|BAJ17807.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|387541732|gb|AFJ71493.1| LIM homeobox transcription factor 1-beta isoform 1 [Macaca mulatta]
Length = 395
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|292494915|ref|NP_001167618.1| LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
gi|301761896|ref|XP_002916366.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 1
[Ailuropoda melanoleuca]
gi|344271902|ref|XP_003407776.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Loxodonta africana]
gi|410979112|ref|XP_003995930.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Felis catus]
gi|281340079|gb|EFB15663.1| hypothetical protein PANDA_004429 [Ailuropoda melanoleuca]
Length = 402
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|308455024|ref|XP_003090090.1| hypothetical protein CRE_21618 [Caenorhabditis remanei]
gi|308266607|gb|EFP10560.1| hypothetical protein CRE_21618 [Caenorhabditis remanei]
Length = 270
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
KK R F+ Q L I++ RP KE+ +A + L + +FF+N RRR+
Sbjct: 211 KKTRFTFSKEQMEVLMGIYEVNDRPGKELIEELAAKFSLSFIQIKDFFLNRRRRA 265
>gi|301609265|ref|XP_002934210.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 192 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 244
>gi|219520075|gb|AAI43802.1| LMX1B protein [Homo sapiens]
Length = 383
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 248
>gi|332230043|ref|XP_003264196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Nomascus leucogenys]
Length = 416
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 225 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 277
>gi|292494913|ref|NP_001167617.1| LIM homeobox transcription factor 1-beta isoform 3 [Homo sapiens]
Length = 406
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|410979116|ref|XP_003995932.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Felis catus]
Length = 406
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|332230041|ref|XP_003264195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Nomascus leucogenys]
Length = 401
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 225 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 277
>gi|70887599|ref|NP_001020669.1| LIM homeobox transcription factor 1, alpha [Danio rerio]
Length = 366
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 29 KRKEEPDISQD-QSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
K E +I+ D + PK+PR + T QRR +A F+ + +P ++++ T+A + GL
Sbjct: 169 KTAGESNITGDVEHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 228
Query: 88 VGNFFMNAR 96
V +F N R
Sbjct: 229 VQVWFQNQR 237
>gi|301761900|ref|XP_002916368.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 3
[Ailuropoda melanoleuca]
Length = 406
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|397473155|ref|XP_003808084.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Pan paniscus]
Length = 402
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 271
>gi|334311511|ref|XP_003339631.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Monodelphis domestica]
Length = 401
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
>gi|308454600|ref|XP_003089911.1| hypothetical protein CRE_09901 [Caenorhabditis remanei]
gi|308267792|gb|EFP11745.1| hypothetical protein CRE_09901 [Caenorhabditis remanei]
Length = 338
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 48 RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
R F Q L I++ RP KE+ +A + L P + +FF+N RRR+
Sbjct: 282 RFTFPKEQMEVLMGIYEVNDRPGKELIEELAEKFSLSPNQIKDFFLNRRRRA 333
>gi|395505738|ref|XP_003757196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Sarcophilus harrisii]
Length = 401
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
>gi|2497672|sp|Q60564.1|LMX1B_MESAU RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|1432087|gb|AAB62320.1| LIM-homeodomain protein [Mesocricetus auratus]
Length = 369
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 186 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 238
>gi|334311509|ref|XP_001366137.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Monodelphis domestica]
Length = 394
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
>gi|395505734|ref|XP_003757194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Sarcophilus harrisii]
Length = 394
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
>gi|326930568|ref|XP_003211418.1| PREDICTED: LIM/homeobox protein LMX-1.2-like [Meleagris gallopavo]
Length = 281
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 100 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 152
>gi|355567904|gb|EHH24245.1| LIM/homeobox protein LMX1B [Macaca mulatta]
Length = 367
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 184 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 236
>gi|45382493|ref|NP_990689.1| LIM/homeobox protein LMX-1.2 [Gallus gallus]
gi|1708855|sp|P53413.1|LMX1B_CHICK RecName: Full=LIM/homeobox protein LMX-1.2; Short=Homeobox protein
LMX-1; Short=LIM/homeobox protein 1; Short=LMX
gi|1050198|gb|AAA96240.1| LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain bp
655-831 [Gallus gallus]
Length = 377
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 247
>gi|358414621|ref|XP_003582878.1| PREDICTED: LIM homeobox transcription factor 1-beta [Bos taurus]
Length = 315
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 132 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 184
>gi|301616969|ref|XP_002937919.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 393
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
>gi|148227168|ref|NP_001083902.1| LIM homeobox transcription factor 1-beta.1 [Xenopus laevis]
gi|82216057|sp|Q8UVR3.1|LMX1B_XENLA RecName: Full=LIM homeobox transcription factor 1-beta.1; AltName:
Full=LIM homeobox protein 1b; Short=Xlmx1b
gi|16974694|gb|AAL32444.1|AF414086_1 LIM homeobox protein 1b [Xenopus laevis]
Length = 400
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
>gi|301616967|ref|XP_002937918.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 400
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
>gi|395505736|ref|XP_003757195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Sarcophilus harrisii]
Length = 404
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
>gi|281348858|gb|EFB24442.1| hypothetical protein PANDA_002084 [Ailuropoda melanoleuca]
Length = 368
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 181 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 233
>gi|1145814|gb|AAA84995.1| LIM homeodomain protein [Gallus gallus]
Length = 377
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 247
>gi|449268581|gb|EMC79437.1| LIM/homeobox protein LMX-1.2, partial [Columba livia]
Length = 291
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 109 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 161
>gi|403416956|emb|CCM03656.1| predicted protein [Fibroporia radiculosa]
Length = 658
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
+Q++ PKKPR + Q L ++ +++ PS E + ++A +LG+E TV ++F N R
Sbjct: 36 NQERIEQPKKPRHRHSAFQLAALNELYDKSEHPSLEERTSLAERLGMETKTVNSWFQNKR 95
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 32 EEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNF 91
+ P + + + S P+K R + Q L+ +++ PSKE + + ++G+ +V N+
Sbjct: 181 QHPHLFEAEESAPRKGRTRPSAAQTEELRKVYEGNPHPSKEEREALGARIGMRYQSVTNW 240
Query: 92 FMNARRRSMDKWKDDDPP 109
F N R + + DDD P
Sbjct: 241 FQNQRSIAKKRSPDDDLP 258
>gi|62461837|gb|AAX83055.1| LIM homeodomain protein [Danio rerio]
Length = 375
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 194 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 246
>gi|309243111|ref|NP_001020338.2| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|48375211|gb|AAT42258.1| LIM homeodomain protein Lmx1b.1 [Danio rerio]
gi|190337176|gb|AAI62952.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|190338183|gb|AAI62932.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
Length = 375
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 194 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 246
>gi|47212495|emb|CAG12709.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 108 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 160
>gi|326924822|ref|XP_003208624.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha-like [Meleagris gallopavo]
Length = 367
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 181 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 233
>gi|410922082|ref|XP_003974512.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Takifugu
rubripes]
Length = 375
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 193 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 245
>gi|348565813|ref|XP_003468697.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Cavia
porcellus]
Length = 382
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 247
>gi|449478514|ref|XP_002188995.2| PREDICTED: LIM/homeobox protein LMX-1.2-like [Taeniopygia guttata]
Length = 352
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 170 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 222
>gi|432874756|ref|XP_004072577.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 398
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 217 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 269
>gi|351696220|gb|EHA99138.1| LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]
Length = 382
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 247
>gi|432095417|gb|ELK26616.1| LIM homeobox transcription factor 1-beta [Myotis davidii]
Length = 227
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSM 100
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R + +
Sbjct: 60 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKEL 116
>gi|348516128|ref|XP_003445591.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Oreochromis niloticus]
Length = 399
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 217 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 269
>gi|327290473|ref|XP_003229947.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like, partial
[Anolis carolinensis]
Length = 293
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 106 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 158
>gi|395530698|ref|XP_003767425.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Sarcophilus
harrisii]
Length = 382
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 247
>gi|5031277|gb|AAD38144.1|AF139497_1 homeobox leucine zipper protein [Prunus armeniaca]
Length = 219
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 51 FTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
F+D Q R L++IF+ + +V +AR+LGL+P V +F N R R
Sbjct: 38 FSDEQIRLLESIFEADSKLEPRRKVQVARELGLQPRQVAIWFQNRRAR 85
>gi|255573765|ref|XP_002527803.1| conserved hypothetical protein [Ricinus communis]
gi|223532799|gb|EEF34575.1| conserved hypothetical protein [Ricinus communis]
Length = 732
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 59 LQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSM 100
L+ +F E + PS+ ++ ++++LGLEP V +F NAR ++
Sbjct: 514 LRQVFAENELPSRTIKENLSKELGLEPGKVSKWFKNARYLAL 555
>gi|324529696|gb|ADY49033.1| LIM homeobox transcription factor 1-alpha, partial [Ascaris suum]
Length = 179
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 35 DISQDQSS--TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFF 92
DI Q +S+ TPK+PR + QRR + F+++ +P ++++ +A++ GL V +F
Sbjct: 115 DIEQSESNRKTPKRPRTILNTQQRRAFKLAFEKSAKPCRKVREQLAKETGLSVRVVQVWF 174
Query: 93 MNAR 96
N R
Sbjct: 175 QNQR 178
>gi|440910599|gb|ELR60379.1| LIM homeobox transcription factor 1-alpha, partial [Bos grunniens
mutus]
Length = 303
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 116 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 168
>gi|393218273|gb|EJD03761.1| hypothetical protein FOMMEDRAFT_139915 [Fomitiporia mediterranea
MF3/22]
Length = 482
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWK 104
KKPR+ +++Q L +++E + PS E + +A LG++P V +F N R + K +
Sbjct: 11 KKPRIRHSEIQLTALNNLYEENEHPSLEERAALAENLGMDPKAVNAWFANKRSATKKKTR 70
Query: 105 DDDPP 109
+ P
Sbjct: 71 GVNHP 75
>gi|389751552|gb|EIM92625.1| homeobox-domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 531
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 32 EEPDISQDQSST----PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTT 87
+E ISQ Q + PKKPR + LQ L +F P + + +A QLG+E T
Sbjct: 10 QEDSISQKQQQSDKDKPKKPRHRHSALQLAALNELFDRNDHPPLDERQALAEQLGMETKT 69
Query: 88 VGNFFMNAR 96
V +F N R
Sbjct: 70 VNAWFQNKR 78
>gi|308470425|ref|XP_003097446.1| hypothetical protein CRE_16984 [Caenorhabditis remanei]
gi|308240154|gb|EFO84106.1| hypothetical protein CRE_16984 [Caenorhabditis remanei]
Length = 338
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
KK R F Q L I++ RP +E+ +A + L + +FF+N RRR+
Sbjct: 279 KKTRFTFPKEQMEVLMGIYEVNDRPGRELIEDLAEKFSLSSNQIKDFFLNRRRRA 333
>gi|345324971|ref|XP_001508423.2| PREDICTED: hypothetical protein LOC100077160 [Ornithorhynchus
anatinus]
Length = 352
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 123 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 175
>gi|114626799|ref|XP_001141606.1| PREDICTED: LIM homeobox transcription factor 1-beta [Pan
troglodytes]
Length = 623
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 440 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 494
>gi|358336024|dbj|GAA54597.1| LIM homeobox transcription factor 1-beta [Clonorchis sinensis]
Length = 412
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 25 KKTCKRKEEP---DISQDQSS--TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIAR 79
K + +R EE D+ D S K+PR + T QRR +++F+ +P+++++ T+A
Sbjct: 108 KGSPERAEEDELFDLDSDSGSGKNSKRPRTILTSSQRRRFKSVFEMNPKPARKLRETLAS 167
Query: 80 QLGLEPTTVGNFFMNARRR 98
+ GL V +F N R +
Sbjct: 168 ETGLNIRVVQVWFQNQRAK 186
>gi|344236825|gb|EGV92928.1| LIM homeobox transcription factor 1-alpha [Cricetulus griseus]
Length = 333
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 146 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 198
>gi|308450292|ref|XP_003088246.1| hypothetical protein CRE_31633 [Caenorhabditis remanei]
gi|308248655|gb|EFO92607.1| hypothetical protein CRE_31633 [Caenorhabditis remanei]
Length = 238
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
KK R F + Q L I++ RP KE+ +A + L + +FF+N RRR+
Sbjct: 179 KKTRFTFPNEQMEVLMRIYEVNDRPGKELIEELAAKFSLSFNQIKDFFLNRRRRA 233
>gi|392570963|gb|EIW64135.1| homeobox-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 538
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++D+S KKPR + Q L A++++ + P E + +A +LG+E TV ++F N R
Sbjct: 24 AKDRSDQAKKPRHRHSASQLAALNALYEKNEHPPLEDRTALAHRLGMETKTVNSWFQNKR 83
Query: 97 RRSMDKWK 104
S + K
Sbjct: 84 ASSKKRHK 91
>gi|47206964|emb|CAF90481.1| unnamed protein product [Tetraodon nigroviridis]
Length = 281
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 41 SSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
+S K PR + T QRRT +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 88 ASVLKAPRTILTKQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 143
>gi|220702719|gb|ACL81158.1| homeobox leucine zipper protein [Mirabilis jalapa]
Length = 248
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 51 FTDLQRRTLQAIFK-ETK-RPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
F+D Q R+L+ IF ETK P K++QV A++LGL+P V +F N R R
Sbjct: 60 FSDEQVRSLETIFATETKLEPKKKVQV--AKELGLQPRQVAIWFQNKRAR 107
>gi|268535064|ref|XP_002632665.1| Hypothetical protein CBG21589 [Caenorhabditis briggsae]
Length = 292
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 23 KKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLG 82
+KK KR E+ + +Q S KK R FT Q + L+ +FK + P+ + ++A+ L
Sbjct: 217 EKKTYLKRIEKME-NQPVESEEKKTRTKFTKYQEKALEEVFKLCQCPTTLTKRSLAKDLN 275
Query: 83 LEPTTVGNFFMNARRR 98
L + N+F+N RRR
Sbjct: 276 LPFVVIQNYFLNHRRR 291
>gi|118343866|ref|NP_001071756.1| transcription factor protein [Ciona intestinalis]
gi|70570111|dbj|BAE06538.1| transcription factor protein [Ciona intestinalis]
Length = 625
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
K+PR + +QRR +A F+ T +P ++++ T+A+ GL V +F N R
Sbjct: 393 KRPRTILNAVQRRAFKAAFEVTPKPCRKVRETLAKDTGLTVRVVQVWFQNQR 444
>gi|351707222|gb|EHB10141.1| LIM homeobox transcription factor 1-beta [Heterocephalus glaber]
Length = 395
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PK+PR + T QRR +A F+ + +P ++++ T A + GL V +F N R + D
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETRAAETGLSVRVVQVWFQNQRAKVSDS 277
>gi|268535060|ref|XP_002632663.1| Hypothetical protein CBG21587 [Caenorhabditis briggsae]
Length = 339
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 45 KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
KK R FT Q + L+ +FK + P+ + ++A+ L L + N+F+N RRR
Sbjct: 285 KKTRTKFTKYQEKALEEVFKLCQCPTTLTKRSLAKDLNLPFVVIQNYFLNHRRR 338
>gi|357449593|ref|XP_003595073.1| Pathogenesis-related homeodomain protein [Medicago truncatula]
gi|355484121|gb|AES65324.1| Pathogenesis-related homeodomain protein [Medicago truncatula]
Length = 707
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 40 QSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRS 99
SS K+P F+ L+ +F E + P K ++ ++++LGL+ V +F NAR +
Sbjct: 476 NSSGIKRPCFRFSHEAVEKLRQVFAENELPPKSVKDALSKELGLDAAKVNKWFKNARYMA 535
Query: 100 M 100
+
Sbjct: 536 L 536
>gi|258504133|gb|ACV72766.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 150 TPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 203
>gi|258504145|gb|ACV72772.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 150 TPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 203
>gi|258504135|gb|ACV72767.1| LIM-6 [Caenorhabditis remanei]
gi|258504137|gb|ACV72768.1| LIM-6 [Caenorhabditis remanei]
gi|258504139|gb|ACV72769.1| LIM-6 [Caenorhabditis remanei]
gi|258504141|gb|ACV72770.1| LIM-6 [Caenorhabditis remanei]
gi|258504143|gb|ACV72771.1| LIM-6 [Caenorhabditis remanei]
gi|258504147|gb|ACV72773.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 150 TPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 203
>gi|168015181|ref|XP_001760129.1| predicted protein [Physcomitrella patens subsp. patens]
gi|7415618|dbj|BAA93462.1| homeobox protein PpHB3 [Physcomitrella patens]
gi|162688509|gb|EDQ74885.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 173
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 39 DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
D+ +L FT Q R L+ F+ +RP+ + T+A +LG++P V +F N R R
Sbjct: 49 DEDDEGSSQKLRFTKAQLRVLEDTFERLQRPNAHQKSTLAMELGVQPRQVEVWFQNRRAR 108
Query: 99 S 99
Sbjct: 109 G 109
>gi|392925295|ref|NP_001256981.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
gi|351020894|emb|CCD62867.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
Length = 310
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 185 TPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 238
>gi|268576445|ref|XP_002643202.1| C. briggsae CBR-LIM-6 protein [Caenorhabditis briggsae]
Length = 257
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 126 TPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 179
>gi|308489722|ref|XP_003107054.1| CRE-LIM-6 protein [Caenorhabditis remanei]
gi|308252942|gb|EFO96894.1| CRE-LIM-6 protein [Caenorhabditis remanei]
Length = 314
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 183 TPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 236
>gi|443694945|gb|ELT95963.1| hypothetical protein CAPTEDRAFT_167213 [Capitella teleta]
Length = 352
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 29 KRKEEPDISQ---DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEP 85
K EE I + D PK+PR + T QRR +A F+ +P ++++ ++A + GL
Sbjct: 146 KSDEESSIDENDADNQKGPKRPRTILTTSQRRKFKASFEVNPKPCRKIRESLASETGLSV 205
Query: 86 TTVGNFFMNAR 96
V +F N R
Sbjct: 206 RVVQVWFQNQR 216
>gi|409051969|gb|EKM61445.1| hypothetical protein PHACADRAFT_248056 [Phanerochaete carnosa
HHB-10118-sp]
Length = 545
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 26 KTCKRKEEPDIS-QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLE 84
K +R +P S D PKKPR + Q L +++ + P+ E + ++A QLG+E
Sbjct: 20 KESQRLPQPSSSYHDSKDKPKKPRHRHSAYQLAALNELYERDEHPALEERTSLAEQLGME 79
Query: 85 PTTVGNFFMNAR 96
TV +F N R
Sbjct: 80 VKTVNAWFQNKR 91
>gi|392925293|ref|NP_001256980.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
gi|351020895|emb|CCD62868.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
Length = 316
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 185 TPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 238
>gi|341878977|gb|EGT34912.1| hypothetical protein CAEBREN_13784 [Caenorhabditis brenneri]
Length = 372
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
T KKPRL F Q L+ F K ++ + +A QL LEP V N+FMN R+
Sbjct: 237 TQKKPRLKFEQWQLDVLEDQFAAKKHVTRAEKRRLAEQLNLEPIQVLNWFMNRRQ 291
>gi|341898967|gb|EGT54902.1| CBN-LIM-6 protein [Caenorhabditis brenneri]
Length = 316
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 43 TPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 186 TPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 239
>gi|242007292|ref|XP_002424475.1| Insulin gene enhancer protein ISL-2, putative [Pediculus humanus
corporis]
gi|212507893|gb|EEB11737.1| Insulin gene enhancer protein ISL-2, putative [Pediculus humanus
corporis]
Length = 396
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
+QD PK+PR + T QR+ +A F+ + +P ++++ +A+ GL V +F N R
Sbjct: 146 NQDGRRGPKRPRTILTTQQRKAFKASFEVSPKPCRKVREALAKDTGLSVRIVQVWFQNQR 205
>gi|256274936|gb|ACU68599.1| mutant Hox1 [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 58 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|284449130|dbj|BAI67344.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare]
Length = 222
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 58 PKKQRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|168808729|gb|ACA29169.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808799|gb|ACA29204.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808831|gb|ACA29220.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808837|gb|ACA29223.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808839|gb|ACA29224.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808841|gb|ACA29225.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808843|gb|ACA29226.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808845|gb|ACA29227.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808847|gb|ACA29228.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808855|gb|ACA29232.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808869|gb|ACA29239.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808883|gb|ACA29246.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808887|gb|ACA29248.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808891|gb|ACA29250.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|219664792|gb|ACL31433.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664846|gb|ACL31460.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664906|gb|ACL31490.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|224487855|dbj|BAH24162.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
vulgare]
gi|284449019|dbj|BAI67292.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare]
Length = 222
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 58 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|379047777|gb|AFC88271.1| homeodomain leucine zipper protein [Hordeum vulgare]
Length = 211
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 58 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|119721184|gb|ABL98072.1| Hox1 [Hordeum vulgare subsp. vulgare]
Length = 212
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 59 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 115
>gi|168808691|gb|ACA29150.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808699|gb|ACA29154.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808705|gb|ACA29157.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808709|gb|ACA29159.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808747|gb|ACA29178.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808769|gb|ACA29189.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808775|gb|ACA29192.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808779|gb|ACA29194.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808813|gb|ACA29211.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808815|gb|ACA29212.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808819|gb|ACA29214.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808853|gb|ACA29231.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808863|gb|ACA29236.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808865|gb|ACA29237.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808877|gb|ACA29243.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808881|gb|ACA29245.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|219664936|gb|ACL31505.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664938|gb|ACL31506.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664940|gb|ACL31507.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664942|gb|ACL31508.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|224487843|dbj|BAH24156.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
vulgare]
gi|224487845|dbj|BAH24157.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
vulgare]
gi|224487847|dbj|BAH24158.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
vulgare]
gi|256274925|gb|ACU68593.1| mutant Hox1 [Hordeum vulgare subsp. vulgare]
gi|256274927|gb|ACU68594.1| mutant Hox1 [Hordeum vulgare subsp. vulgare]
gi|256274931|gb|ACU68596.1| mutant Hox1 [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 58 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|284449032|dbj|BAI67295.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare]
gi|284449080|dbj|BAI67319.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare]
Length = 222
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 10 KKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRP 69
+ + K+K ++++++ C + D PKK RL TD Q L+ F+E ++
Sbjct: 24 QGETSKQKARRRRRRSARCGGGDGDGGEMDGGGDPKKRRL--TDEQAEILELSFREDRKL 81
Query: 70 SKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
+V +A +LGL+P V +F N R R +K
Sbjct: 82 ETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|119943317|dbj|BAF43315.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare subsp.
vulgare]
gi|119943319|dbj|BAF43316.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare subsp.
vulgare]
gi|168808713|gb|ACA29161.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808715|gb|ACA29162.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808717|gb|ACA29163.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808719|gb|ACA29164.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808721|gb|ACA29165.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808723|gb|ACA29166.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808725|gb|ACA29167.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808727|gb|ACA29168.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808731|gb|ACA29170.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808733|gb|ACA29171.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808735|gb|ACA29172.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808737|gb|ACA29173.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808749|gb|ACA29179.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808751|gb|ACA29180.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808753|gb|ACA29181.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808755|gb|ACA29182.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808757|gb|ACA29183.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808759|gb|ACA29184.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808761|gb|ACA29185.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808763|gb|ACA29186.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808771|gb|ACA29190.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808773|gb|ACA29191.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808789|gb|ACA29199.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808791|gb|ACA29200.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808793|gb|ACA29201.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808795|gb|ACA29202.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808797|gb|ACA29203.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808823|gb|ACA29216.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808825|gb|ACA29217.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808827|gb|ACA29218.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808829|gb|ACA29219.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808833|gb|ACA29221.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808835|gb|ACA29222.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808849|gb|ACA29229.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808851|gb|ACA29230.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808857|gb|ACA29233.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808859|gb|ACA29234.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808867|gb|ACA29238.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808871|gb|ACA29240.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808885|gb|ACA29247.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|168808889|gb|ACA29249.1| homeodomain-leucine zipper I-class homeobox protein [Hordeum
vulgare subsp. vulgare]
gi|219664772|gb|ACL31423.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664774|gb|ACL31424.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664776|gb|ACL31425.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664778|gb|ACL31426.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664780|gb|ACL31427.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664782|gb|ACL31428.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664784|gb|ACL31429.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664786|gb|ACL31430.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664788|gb|ACL31431.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664790|gb|ACL31432.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664794|gb|ACL31434.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664796|gb|ACL31435.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664798|gb|ACL31436.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664800|gb|ACL31437.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664802|gb|ACL31438.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664804|gb|ACL31439.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664806|gb|ACL31440.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664808|gb|ACL31441.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664810|gb|ACL31442.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664812|gb|ACL31443.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664814|gb|ACL31444.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664816|gb|ACL31445.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664818|gb|ACL31446.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664820|gb|ACL31447.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664822|gb|ACL31448.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664824|gb|ACL31449.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664826|gb|ACL31450.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664828|gb|ACL31451.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664830|gb|ACL31452.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664832|gb|ACL31453.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664834|gb|ACL31454.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664836|gb|ACL31455.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664838|gb|ACL31456.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664840|gb|ACL31457.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664842|gb|ACL31458.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664844|gb|ACL31459.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664848|gb|ACL31461.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664850|gb|ACL31462.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664852|gb|ACL31463.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664854|gb|ACL31464.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664856|gb|ACL31465.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664858|gb|ACL31466.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664860|gb|ACL31467.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664862|gb|ACL31468.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664864|gb|ACL31469.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664866|gb|ACL31470.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664868|gb|ACL31471.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664872|gb|ACL31473.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664874|gb|ACL31474.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664876|gb|ACL31475.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664878|gb|ACL31476.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664880|gb|ACL31477.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664882|gb|ACL31478.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664884|gb|ACL31479.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664886|gb|ACL31480.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664888|gb|ACL31481.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664890|gb|ACL31482.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664892|gb|ACL31483.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664894|gb|ACL31484.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664896|gb|ACL31485.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664898|gb|ACL31486.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664900|gb|ACL31487.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664902|gb|ACL31488.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664904|gb|ACL31489.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664908|gb|ACL31491.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664910|gb|ACL31492.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664912|gb|ACL31493.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664914|gb|ACL31494.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664916|gb|ACL31495.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664918|gb|ACL31496.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664920|gb|ACL31497.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664922|gb|ACL31498.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664924|gb|ACL31499.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664926|gb|ACL31500.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664928|gb|ACL31501.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664930|gb|ACL31502.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664932|gb|ACL31503.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|219664934|gb|ACL31504.1| homeodomain leucine zipper protein [Hordeum vulgare subsp. vulgare]
gi|224487835|dbj|BAH24152.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
vulgare]
gi|284449007|dbj|BAI67289.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare]
Length = 222
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 58 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|284449046|dbj|BAI67302.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare]
Length = 222
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 58 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|224487849|dbj|BAH24159.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
spontaneum]
gi|284449044|dbj|BAI67301.1| homeodomain leucine zipper protein Vrs1 [Hordeum vulgare]
Length = 222
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 58 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 114
>gi|218664761|gb|ACK99542.1| Hox-1 [Hordeum vulgare subsp. vulgare]
Length = 220
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDK 102
PKK RL TD Q L+ F+E ++ +V +A +LGL+P V +F N R R +K
Sbjct: 56 PKKRRL--TDEQAEILELSFREDRKLETARKVYLAAELGLDPKQVAVWFQNRRARHKNK 112
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.126 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,779,447,632
Number of Sequences: 23463169
Number of extensions: 70388919
Number of successful extensions: 3098899
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14534
Number of HSP's successfully gapped in prelim test: 4689
Number of HSP's that attempted gapping in prelim test: 2442128
Number of HSP's gapped (non-prelim): 370672
length of query: 111
length of database: 8,064,228,071
effective HSP length: 79
effective length of query: 32
effective length of database: 6,210,637,720
effective search space: 198740407040
effective search space used: 198740407040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 69 (31.2 bits)