Your job contains 1 sequence.
>psy15969
MVEKRRKKEKKKKKKKKKKKKKKKKKTCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQ
AIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKP
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15969
(111 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028996 - symbol:onecut "onecut" species:7227 "Dro... 291 2.2e-24 1
ZFIN|ZDB-GENE-120215-73 - symbol:si:ch1073-41k10.1 "si:ch... 259 8.5e-22 1
UNIPROTKB|F1NMD9 - symbol:F1NMD9 "Uncharacterized protein... 254 9.0e-22 1
UNIPROTKB|G3N248 - symbol:ONECUT1 "Uncharacterized protei... 254 3.2e-21 1
UNIPROTKB|E2R096 - symbol:ONECUT1 "Uncharacterized protei... 254 3.2e-21 1
UNIPROTKB|Q9UBC0 - symbol:ONECUT1 "Hepatocyte nuclear fac... 254 3.2e-21 1
UNIPROTKB|F1RZD6 - symbol:ONECUT1 "Uncharacterized protei... 254 3.2e-21 1
MGI|MGI:1196423 - symbol:Onecut1 "one cut domain, family ... 254 3.2e-21 1
RGD|2811 - symbol:Onecut1 "one cut homeobox 1" species:10... 254 3.2e-21 1
UNIPROTKB|P70512 - symbol:Onecut1 "Hepatocyte nuclear fac... 254 3.2e-21 1
UNIPROTKB|F1MXR2 - symbol:ONECUT2 "Uncharacterized protei... 246 6.3e-21 1
UNIPROTKB|F1P9A2 - symbol:ONECUT2 "Uncharacterized protei... 243 1.3e-20 1
UNIPROTKB|H7C5F3 - symbol:ONECUT2 "One cut domain family ... 243 1.3e-20 1
RGD|1564677 - symbol:Onecut2 "one cut homeobox 2" species... 243 4.0e-20 1
UNIPROTKB|J3KR63 - symbol:ONECUT2 "One cut domain family ... 243 6.1e-20 1
UNIPROTKB|O95948 - symbol:ONECUT2 "One cut domain family ... 243 6.8e-20 1
MGI|MGI:1891408 - symbol:Onecut2 "one cut domain, family ... 243 6.9e-20 1
UNIPROTKB|G3MX15 - symbol:ONECUT3 "Uncharacterized protei... 235 9.2e-20 1
RGD|1591005 - symbol:LOC690827 "similar to one cut domain... 234 1.2e-19 1
WB|WBGene00015934 - symbol:ceh-48 species:6239 "Caenorhab... 237 2.3e-19 1
UNIPROTKB|F1SDH9 - symbol:ONECUT3 "Uncharacterized protei... 235 3.5e-19 1
UNIPROTKB|I3L6D9 - symbol:ONECUT3 "Uncharacterized protei... 235 4.5e-19 1
UNIPROTKB|O60422 - symbol:ONECUT3 "One cut domain family ... 235 4.8e-19 1
ZFIN|ZDB-GENE-040426-1469 - symbol:onecut1 "one cut domai... 234 5.1e-19 1
MGI|MGI:1891409 - symbol:Onecut3 "one cut domain, family ... 234 6.1e-19 1
ZFIN|ZDB-GENE-050208-744 - symbol:onecut3 "one cut homeob... 231 1.0e-18 1
ZFIN|ZDB-GENE-020531-1 - symbol:onecutl "one cut domain, ... 216 4.5e-17 1
WB|WBGene00000459 - symbol:ceh-38 species:6239 "Caenorhab... 214 1.6e-16 1
WB|WBGene00000444 - symbol:ceh-21 species:6239 "Caenorhab... 134 4.4e-08 1
UNIPROTKB|E2QWY9 - symbol:ONECUT3 "Uncharacterized protei... 133 4.6e-08 1
WB|WBGene00000460 - symbol:ceh-39 species:6239 "Caenorhab... 129 1.1e-07 1
UNIPROTKB|F1S229 - symbol:LMX1A "Uncharacterized protein"... 103 4.2e-05 1
UNIPROTKB|I3L863 - symbol:LMX1A "Uncharacterized protein"... 103 4.2e-05 1
ZFIN|ZDB-GENE-050114-3 - symbol:lmx1ba "LIM homeobox tran... 102 8.1e-05 1
UNIPROTKB|F1N4F7 - symbol:LMX1B "Uncharacterized protein"... 100 8.8e-05 1
UNIPROTKB|F1RS26 - symbol:LMX1B "Uncharacterized protein"... 100 8.8e-05 1
ZFIN|ZDB-GENE-041014-332 - symbol:lmx1a "LIM homeobox tra... 101 0.00010 1
WB|WBGene00000462 - symbol:ceh-41 species:6239 "Caenorhab... 99 0.00010 1
UNIPROTKB|J9NU69 - symbol:LMX1B "Uncharacterized protein"... 100 0.00011 1
UNIPROTKB|F1MC25 - symbol:LMX1A "Uncharacterized protein"... 101 0.00011 1
WB|WBGene00002988 - symbol:lim-6 species:6239 "Caenorhabd... 99 0.00013 1
MGI|MGI:1100513 - symbol:Lmx1b "LIM homeobox transcriptio... 100 0.00013 1
UNIPROTKB|G3V877 - symbol:Lmx1b "LIM homeobox transcripti... 100 0.00013 1
ZFIN|ZDB-GENE-050114-2 - symbol:lmx1bb "LIM homeobox tran... 100 0.00013 1
UNIPROTKB|F1NDZ5 - symbol:LMX1B "LIM/homeobox protein LMX... 100 0.00013 1
UNIPROTKB|P53413 - symbol:LMX1B "LIM/homeobox protein LMX... 100 0.00013 1
UNIPROTKB|O60663 - symbol:LMX1B "LIM homeobox transcripti... 100 0.00014 1
UNIPROTKB|F1PDJ1 - symbol:LMX1A "Uncharacterized protein"... 100 0.00014 1
UNIPROTKB|Q8TE12 - symbol:LMX1A "LIM homeobox transcripti... 100 0.00014 1
MGI|MGI:1888519 - symbol:Lmx1a "LIM homeobox transcriptio... 100 0.00014 1
RGD|1304784 - symbol:Lmx1a "LIM homeobox transcription fa... 100 0.00014 1
UNIPROTKB|B7ZLH2 - symbol:LMX1B "LMX1B protein" species:9... 100 0.00014 1
UNIPROTKB|E1C2D6 - symbol:E1C2D6 "Uncharacterized protein... 100 0.00014 1
UNIPROTKB|F8VYP0 - symbol:LMX1B "LIM homeobox transcripti... 100 0.00014 1
UNIPROTKB|Q8UVR3 - symbol:lmx1b.1 "LIM homeobox transcrip... 100 0.00015 1
UNIPROTKB|F8W7W6 - symbol:LMX1B "LIM homeobox transcripti... 100 0.00015 1
UNIPROTKB|H9L043 - symbol:H9L043 "Uncharacterized protein... 94 0.00037 1
WB|WBGene00000464 - symbol:ceh-44 species:6239 "Caenorhab... 99 0.00081 1
FB|FBgn0052105 - symbol:CG32105 species:7227 "Drosophila ... 95 0.00097 1
MGI|MGI:94904 - symbol:Dlx4 "distal-less homeobox 4" spec... 89 0.00098 1
>FB|FBgn0028996 [details] [associations]
symbol:onecut "onecut" species:7227 "Drosophila melanogaster"
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0001077 EMBL:AE014135 Gene3D:1.10.260.40 SUPFAM:SSF47413
GeneTree:ENSGT00530000063019 eggNOG:NOG307335 EMBL:AF169227
RefSeq:NP_524842.2 UniGene:Dm.1788 ProteinModelPortal:Q9NJB5
SMR:Q9NJB5 STRING:Q9NJB5 EnsemblMetazoa:FBtr0089104
EnsemblMetazoa:FBtr0310610 GeneID:45816 KEGG:dme:Dmel_CG1922
UCSC:CG1922-RA CTD:45816 FlyBase:FBgn0028996 InParanoid:Q9NJB5
OMA:HTTAMSP OrthoDB:EOG4J9KDS PhylomeDB:Q9NJB5 GenomeRNAi:45816
NextBio:838367 Bgee:Q9NJB5 GermOnline:CG1922 Uniprot:Q9NJB5
Length = 1081
Score = 291 (107.5 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 58/62 (93%), Positives = 59/62 (95%)
Query: 39 DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
+Q PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR
Sbjct: 915 EQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 974
Query: 99 SM 100
SM
Sbjct: 975 SM 976
>ZFIN|ZDB-GENE-120215-73 [details] [associations]
symbol:si:ch1073-41k10.1 "si:ch1073-41k10.1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 ZFIN:ZDB-GENE-120215-73 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
EMBL:CU896635 Ensembl:ENSDART00000151049 Uniprot:I3IT10
Length = 459
Score = 259 (96.2 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 52/66 (78%), Positives = 60/66 (90%)
Query: 35 DISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
D S+D+S+TPKK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE +TV NFFMN
Sbjct: 374 DPSKDRSNTPKKSRLVFTDLQRRTLLAIFKENKRPSKEMQMTISQQLGLELSTVSNFFMN 433
Query: 95 ARRRSM 100
ARRRS+
Sbjct: 434 ARRRSL 439
>UNIPROTKB|F1NMD9 [details] [associations]
symbol:F1NMD9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001889
"liver development" evidence=IEA] [GO:0001952 "regulation of
cell-matrix adhesion" evidence=IEA] [GO:0002064 "epithelial cell
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006006 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030335
GO:GO:0045165 GO:GO:0030512 GO:GO:0001952
GeneTree:ENSGT00530000063019 EMBL:AADN02045413 IPI:IPI00601177
Ensembl:ENSGALT00000007245 OMA:VACKRKE Uniprot:F1NMD9
Length = 90
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +TV NFFMNARR
Sbjct: 25 KDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARR 84
Query: 98 RSM 100
RS+
Sbjct: 85 RSL 87
>UNIPROTKB|G3N248 [details] [associations]
symbol:ONECUT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0007492
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GeneTree:ENSGT00530000063019 CTD:3175
KO:K08026 OMA:QMEEVNT EMBL:DAAA02028984 RefSeq:NP_001178090.1
UniGene:Bt.106196 UniGene:Bt.37181 Ensembl:ENSBTAT00000066281
GeneID:503584 KEGG:bta:503584 NextBio:20866219 Uniprot:G3N248
Length = 465
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +TV NFFMNARR
Sbjct: 379 KDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARR 438
Query: 98 RSM 100
RS+
Sbjct: 439 RSL 441
>UNIPROTKB|E2R096 [details] [associations]
symbol:ONECUT1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0007492
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GeneTree:ENSGT00530000063019 CTD:3175
KO:K08026 OMA:QMEEVNT EMBL:AAEX03016146 RefSeq:XP_851227.2
Ensembl:ENSCAFT00000025139 GeneID:487558 KEGG:cfa:487558
NextBio:20861136 Uniprot:E2R096
Length = 465
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +TV NFFMNARR
Sbjct: 379 KDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARR 438
Query: 98 RSM 100
RS+
Sbjct: 439 RSL 441
>UNIPROTKB|Q9UBC0 [details] [associations]
symbol:ONECUT1 "Hepatocyte nuclear factor 6" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0001952 "regulation of cell-matrix adhesion" evidence=IEA]
[GO:0002064 "epithelial cell development" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0031018 "endocrine pancreas development"
evidence=TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISS] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 Reactome:REACT_111045
GO:GO:0043565 GO:GO:0001889 GO:GO:0006006 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 EMBL:CH471082
GO:GO:0007492 GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413
GO:GO:0030512 Pathway_Interaction_DB:foxm1pathway GO:GO:0002064
GO:GO:0001952 eggNOG:NOG307335 EMBL:AF035581 EMBL:AF035580
EMBL:U96173 EMBL:BC140830 EMBL:Y17739 EMBL:U77975 IPI:IPI00002508
RefSeq:NP_004489.1 UniGene:Hs.658573 ProteinModelPortal:Q9UBC0
SMR:Q9UBC0 STRING:Q9UBC0 PhosphoSite:Q9UBC0 DMDM:13627184
PRIDE:Q9UBC0 Ensembl:ENST00000305901 GeneID:3175 KEGG:hsa:3175
UCSC:uc002aci.1 CTD:3175 GeneCards:GC15M053049 HGNC:HGNC:8138
HPA:HPA003457 MIM:604164 neXtProt:NX_Q9UBC0 PharmGKB:PA31924
HOGENOM:HOG000232114 HOVERGEN:HBG005981 InParanoid:Q9UBC0 KO:K08026
OMA:QMEEVNT OrthoDB:EOG480HWX PhylomeDB:Q9UBC0 ChiTaRS:ONECUT1
GenomeRNAi:3175 NextBio:12598 ArrayExpress:Q9UBC0 Bgee:Q9UBC0
CleanEx:HS_ONECUT1 Genevestigator:Q9UBC0 GermOnline:ENSG00000169856
Uniprot:Q9UBC0
Length = 465
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +TV NFFMNARR
Sbjct: 379 KDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARR 438
Query: 98 RSM 100
RS+
Sbjct: 439 RSL 441
>UNIPROTKB|F1RZD6 [details] [associations]
symbol:ONECUT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0007492
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GeneTree:ENSGT00530000063019 CTD:3175
KO:K08026 OMA:QMEEVNT EMBL:CU075354 RefSeq:XP_001929026.1
UniGene:Ssc.38609 Ensembl:ENSSSCT00000005097 GeneID:100152052
KEGG:ssc:100152052 Uniprot:F1RZD6
Length = 465
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +TV NFFMNARR
Sbjct: 379 KDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARR 438
Query: 98 RSM 100
RS+
Sbjct: 439 RSL 441
>MGI|MGI:1196423 [details] [associations]
symbol:Onecut1 "one cut domain, family member 1"
species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0001889 "liver development"
evidence=IGI] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IGI] [GO:0002064 "epithelial cell development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006006 "glucose metabolic process" evidence=ISO;IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0009653 "anatomical structure
morphogenesis" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030183 "B cell differentiation" evidence=IMP]
[GO:0030335 "positive regulation of cell migration" evidence=IGI]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IGI] [GO:0031016 "pancreas
development" evidence=IGI;IMP] [GO:0031018 "endocrine pancreas
development" evidence=IGI] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0048536 "spleen
development" evidence=IMP] Reactome:REACT_13641 InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 MGI:MGI:1196423 GO:GO:0005654
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 GO:GO:0006006 Gene3D:1.10.10.60
SUPFAM:SSF46689 Reactome:REACT_127416 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0007492
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GeneTree:ENSGT00530000063019
eggNOG:NOG307335 CTD:3175 HOGENOM:HOG000232114 HOVERGEN:HBG005981
KO:K08026 OMA:QMEEVNT OrthoDB:EOG480HWX EMBL:U95945 EMBL:BC024053
IPI:IPI00115589 RefSeq:NP_032288.1 UniGene:Mm.303355 PDB:1S7E
PDBsum:1S7E ProteinModelPortal:O08755 SMR:O08755 STRING:O08755
PhosphoSite:O08755 PRIDE:O08755 Ensembl:ENSMUST00000056006
GeneID:15379 KEGG:mmu:15379 UCSC:uc009qrh.1 InParanoid:O08755
EvolutionaryTrace:O08755 NextBio:288042 Bgee:O08755
CleanEx:MM_ONECUT1 Genevestigator:O08755
GermOnline:ENSMUSG00000043013 Uniprot:O08755
Length = 465
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +TV NFFMNARR
Sbjct: 379 KDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARR 438
Query: 98 RSM 100
RS+
Sbjct: 439 RSL 441
>RGD|2811 [details] [associations]
symbol:Onecut1 "one cut homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001889 "liver development" evidence=ISO] [GO:0001952 "regulation
of cell-matrix adhesion" evidence=ISO] [GO:0002064 "epithelial cell
development" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO;IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0006006 "glucose metabolic process"
evidence=ISO;IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007492 "endoderm
development" evidence=ISO] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030183 "B cell differentiation" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0031016 "pancreas
development" evidence=ISO] [GO:0031018 "endocrine pancreas
development" evidence=ISO] [GO:0042384 "cilium assembly"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=ISO;IMP;IDA] [GO:0048536 "spleen development"
evidence=ISO] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
RGD:2811 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0001077
Gene3D:1.10.260.40 SUPFAM:SSF47413 eggNOG:NOG307335 CTD:3175
HOGENOM:HOG000232114 HOVERGEN:HBG005981 KO:K08026 EMBL:X96553
EMBL:Y14933 IPI:IPI00189591 IPI:IPI00231378 RefSeq:NP_073162.1
UniGene:Rn.48812 PDB:2D5V PDBsum:2D5V ProteinModelPortal:P70512
SMR:P70512 STRING:P70512 GeneID:25231 KEGG:rno:25231 UCSC:RGD:2811
EvolutionaryTrace:P70512 NextBio:605791 ArrayExpress:P70512
Genevestigator:P70512 GermOnline:ENSRNOG00000008095 Uniprot:P70512
Length = 465
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +TV NFFMNARR
Sbjct: 379 KDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARR 438
Query: 98 RSM 100
RS+
Sbjct: 439 RSL 441
>UNIPROTKB|P70512 [details] [associations]
symbol:Onecut1 "Hepatocyte nuclear factor 6" species:10116
"Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
RGD:2811 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0001077
Gene3D:1.10.260.40 SUPFAM:SSF47413 eggNOG:NOG307335 CTD:3175
HOGENOM:HOG000232114 HOVERGEN:HBG005981 KO:K08026 EMBL:X96553
EMBL:Y14933 IPI:IPI00189591 IPI:IPI00231378 RefSeq:NP_073162.1
UniGene:Rn.48812 PDB:2D5V PDBsum:2D5V ProteinModelPortal:P70512
SMR:P70512 STRING:P70512 GeneID:25231 KEGG:rno:25231 UCSC:RGD:2811
EvolutionaryTrace:P70512 NextBio:605791 ArrayExpress:P70512
Genevestigator:P70512 GermOnline:ENSRNOG00000008095 Uniprot:P70512
Length = 465
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D+ +TPKKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE +TV NFFMNARR
Sbjct: 379 KDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARR 438
Query: 98 RSM 100
RS+
Sbjct: 439 RSL 441
>UNIPROTKB|F1MXR2 [details] [associations]
symbol:ONECUT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0030335 GO:GO:0042384 GO:GO:0031018
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GO:GO:0048935
GeneTree:ENSGT00530000063019 OMA:SPYKEMP EMBL:DAAA02057150
EMBL:DAAA02057151 IPI:IPI01003833 Ensembl:ENSBTAT00000030977
Uniprot:F1MXR2
Length = 364
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 49/64 (76%), Positives = 58/64 (90%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S+D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE TTV NFFMNAR
Sbjct: 279 SKDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLELTTVSNFFMNAR 338
Query: 97 RRSM 100
RRS+
Sbjct: 339 RRSL 342
>UNIPROTKB|F1P9A2 [details] [associations]
symbol:ONECUT2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0048935 "peripheral nervous system neuron development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0042384 "cilium assembly"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0001889 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030335 GO:GO:0042384
GO:GO:0031018 GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413
GO:GO:0030512 GO:GO:0002064 GO:GO:0001952 GO:GO:0048935
GeneTree:ENSGT00530000063019 CTD:9480 EMBL:AAEX03000124
EMBL:AAEX03000125 RefSeq:XP_541087.2 Ensembl:ENSCAFT00000000210
GeneID:483967 KEGG:cfa:483967 OMA:XEAHHTA Uniprot:F1P9A2
Length = 307
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 48/64 (75%), Positives = 58/64 (90%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE TTV NFFMNAR
Sbjct: 222 NKDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLELTTVSNFFMNAR 281
Query: 97 RRSM 100
RRS+
Sbjct: 282 RRSL 285
>UNIPROTKB|H7C5F3 [details] [associations]
symbol:ONECUT2 "One cut domain family member 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC090340
HGNC:HGNC:8139 ProteinModelPortal:H7C5F3 Ensembl:ENST00000481727
Uniprot:H7C5F3
Length = 133
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 48/64 (75%), Positives = 58/64 (90%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE TTV NFFMNAR
Sbjct: 48 NKDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLELTTVSNFFMNAR 107
Query: 97 RRSM 100
RRS+
Sbjct: 108 RRSL 111
>RGD|1564677 [details] [associations]
symbol:Onecut2 "one cut homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001889 "liver development" evidence=ISO]
[GO:0001952 "regulation of cell-matrix adhesion" evidence=ISO]
[GO:0002064 "epithelial cell development" evidence=ISO] [GO:0003677
"DNA binding" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0009653 "anatomical
structure morphogenesis" evidence=ISO] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=ISO] [GO:0031016 "pancreas development"
evidence=ISO] [GO:0031018 "endocrine pancreas development"
evidence=ISO] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048935 "peripheral nervous system
neuron development" evidence=ISO] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 RGD:1564677 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 IPI:IPI00367519
Ensembl:ENSRNOT00000024631 Uniprot:F1LUD6
Length = 431
Score = 243 (90.6 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 48/64 (75%), Positives = 58/64 (90%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE TTV NFFMNAR
Sbjct: 346 NKDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLELTTVSNFFMNAR 405
Query: 97 RRSM 100
RRS+
Sbjct: 406 RRSL 409
>UNIPROTKB|J3KR63 [details] [associations]
symbol:ONECUT2 "One cut domain family member 2"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048935 "peripheral nervous system
neuron development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 EMBL:AC090340 HGNC:HGNC:8139
ProteinModelPortal:J3KR63 Ensembl:ENST00000491143 PhylomeDB:J3KR63
Uniprot:J3KR63
Length = 485
Score = 243 (90.6 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 48/64 (75%), Positives = 58/64 (90%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE TTV NFFMNAR
Sbjct: 400 NKDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLELTTVSNFFMNAR 459
Query: 97 RRSM 100
RRS+
Sbjct: 460 RRSL 463
>UNIPROTKB|O95948 [details] [associations]
symbol:ONECUT2 "One cut domain family member 2"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0001952 "regulation of cell-matrix adhesion" evidence=IEA]
[GO:0002064 "epithelial cell development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048935 "peripheral nervous system neuron development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=TAS] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 GO:GO:0030335
GO:GO:0042384 GO:GO:0031018 GO:GO:0045165 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0030512 GO:GO:0002064 GO:GO:0001952
GO:GO:0048935 eggNOG:NOG307335 HOGENOM:HOG000232114
HOVERGEN:HBG005981 OrthoDB:EOG480HWX EMBL:Y18198 EMBL:AC090340
IPI:IPI00001413 RefSeq:NP_004843.2 UniGene:Hs.194725
ProteinModelPortal:O95948 SMR:O95948 STRING:O95948
PhosphoSite:O95948 PaxDb:O95948 PRIDE:O95948
Ensembl:ENST00000262095 GeneID:9480 KEGG:hsa:9480 UCSC:uc002lgo.3
CTD:9480 GeneCards:GC18P055102 H-InvDB:HIX0039750 HGNC:HGNC:8139
MIM:604894 neXtProt:NX_O95948 PharmGKB:PA31925 InParanoid:O95948
OMA:SPYKEMP GenomeRNAi:9480 NextBio:35532 Bgee:O95948
CleanEx:HS_ONECUT2 Genevestigator:O95948 Uniprot:O95948
Length = 504
Score = 243 (90.6 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 48/64 (75%), Positives = 58/64 (90%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE TTV NFFMNAR
Sbjct: 419 NKDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLELTTVSNFFMNAR 478
Query: 97 RRSM 100
RRS+
Sbjct: 479 RRSL 482
>MGI|MGI:1891408 [details] [associations]
symbol:Onecut2 "one cut domain, family member 2"
species:10090 "Mus musculus" [GO:0001889 "liver development"
evidence=IGI] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IGI] [GO:0002064 "epithelial cell development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0030335 "positive regulation of cell migration" evidence=IGI]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IGI] [GO:0031016 "pancreas
development" evidence=IGI] [GO:0031018 "endocrine pancreas
development" evidence=IGI] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IMP] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 MGI:MGI:1891408 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0045165
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512 GO:GO:0002064
GO:GO:0001952 GO:GO:0048935 GeneTree:ENSGT00530000063019
eggNOG:NOG307335 HOGENOM:HOG000232114 HOVERGEN:HBG005981
OrthoDB:EOG480HWX CTD:9480 OMA:SPYKEMP EMBL:AY242995 EMBL:AC102106
IPI:IPI00875264 RefSeq:NP_919244.2 UniGene:Mm.234723
ProteinModelPortal:Q6XBJ3 SMR:Q6XBJ3 STRING:Q6XBJ3
PhosphoSite:Q6XBJ3 PRIDE:Q6XBJ3 Ensembl:ENSMUST00000115145
GeneID:225631 KEGG:mmu:225631 UCSC:uc008fef.1 InParanoid:Q6XBJ3
NextBio:377732 Bgee:Q6XBJ3 CleanEx:MM_ONECUT2 Genevestigator:Q6XBJ3
Uniprot:Q6XBJ3
Length = 505
Score = 243 (90.6 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 48/64 (75%), Positives = 58/64 (90%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
++D++++ KK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE TTV NFFMNAR
Sbjct: 420 NKDRNNSQKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITISQQLGLELTTVSNFFMNAR 479
Query: 97 RRSM 100
RRS+
Sbjct: 480 RRSL 483
>UNIPROTKB|G3MX15 [details] [associations]
symbol:ONECUT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 EMBL:DAAA02020281
Ensembl:ENSBTAT00000064922 OMA:YGAPSHL Uniprot:G3MX15
Length = 256
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 48/63 (76%), Positives = 54/63 (85%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE TV NFFMNARR
Sbjct: 170 KERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELNTVSNFFMNARR 229
Query: 98 RSM 100
R M
Sbjct: 230 RCM 232
>RGD|1591005 [details] [associations]
symbol:LOC690827 "similar to one cut domain, family member 3"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 Gene3D:1.10.260.40 SUPFAM:SSF47413
GeneTree:ENSGT00530000063019 IPI:IPI00768378
Ensembl:ENSRNOT00000046427 Uniprot:F1M0F1
Length = 232
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 48/66 (72%), Positives = 54/66 (81%)
Query: 35 DISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
D ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQ TI++QLGLE TV NFFMN
Sbjct: 144 DQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQATISQQLGLELNTVSNFFMN 203
Query: 95 ARRRSM 100
ARRR M
Sbjct: 204 ARRRCM 209
>WB|WBGene00015934 [details] [associations]
symbol:ceh-48 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 eggNOG:NOG307335
EMBL:FO080597 PIR:A88712 RefSeq:NP_501046.1
ProteinModelPortal:O45080 SMR:O45080 DIP:DIP-25436N IntAct:O45080
MINT:MINT-1073800 PaxDb:O45080 EnsemblMetazoa:C17H12.9.1
EnsemblMetazoa:C17H12.9.2 GeneID:182756 KEGG:cel:CELE_C17H12.9
UCSC:C17H12.9 CTD:182756 WormBase:C17H12.9 HOGENOM:HOG000018091
InParanoid:O45080 OMA:QEADSTT NextBio:918718 Uniprot:O45080
Length = 459
Score = 237 (88.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 45/59 (76%), Positives = 53/59 (89%)
Query: 40 QSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
Q PKK RLVF+D+QRRTLQAIF+ETKRPS+EMQ+TI++QL L+PTTV NFFMNARRR
Sbjct: 317 QMVVPKKTRLVFSDIQRRTLQAIFRETKRPSREMQITISQQLNLDPTTVANFFMNARRR 375
>UNIPROTKB|F1SDH9 [details] [associations]
symbol:ONECUT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
EMBL:FP102751 Ensembl:ENSSSCT00000014683 Uniprot:F1SDH9
Length = 446
Score = 235 (87.8 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 48/63 (76%), Positives = 54/63 (85%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE TV NFFMNARR
Sbjct: 360 KERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELNTVSNFFMNARR 419
Query: 98 RSM 100
R M
Sbjct: 420 RCM 422
>UNIPROTKB|I3L6D9 [details] [associations]
symbol:ONECUT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 OMA:HPAMGMA
EMBL:FP102751 Ensembl:ENSSSCT00000029615 Uniprot:I3L6D9
Length = 482
Score = 235 (87.8 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 48/63 (76%), Positives = 54/63 (85%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE TV NFFMNARR
Sbjct: 396 KERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELNTVSNFFMNARR 455
Query: 98 RSM 100
R M
Sbjct: 456 RCM 458
>UNIPROTKB|O60422 [details] [associations]
symbol:ONECUT3 "One cut domain family member 3"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=TAS] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
Reactome:REACT_111045 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0031018 Gene3D:1.10.260.40 SUPFAM:SSF47413 EMBL:AC004755
eggNOG:NOG307335 HOGENOM:HOG000232114 HOVERGEN:HBG005981
EMBL:AC005256 IPI:IPI00556491 RefSeq:NP_001073957.1
UniGene:Hs.654347 HSSP:O08755 ProteinModelPortal:O60422 SMR:O60422
STRING:O60422 PhosphoSite:O60422 PRIDE:O60422
Ensembl:ENST00000382349 GeneID:390874 KEGG:hsa:390874
UCSC:uc010xgr.2 CTD:390874 GeneCards:GC19P001727 HGNC:HGNC:13399
MIM:611294 neXtProt:NX_O60422 PharmGKB:PA31926 InParanoid:O60422
OMA:HPAMGMA OrthoDB:EOG4ZS93X GenomeRNAi:390874 NextBio:104112
Bgee:O60422 CleanEx:HS_ONECUT3 Genevestigator:O60422 Uniprot:O60422
Length = 494
Score = 235 (87.8 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 48/63 (76%), Positives = 54/63 (85%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQVTI++QLGLE TV NFFMNARR
Sbjct: 408 KERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQVTISQQLGLELNTVSNFFMNARR 467
Query: 98 RSM 100
R M
Sbjct: 468 RCM 470
>ZFIN|ZDB-GENE-040426-1469 [details] [associations]
symbol:onecut1 "one cut domain, family member 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001889 "liver development" evidence=IMP]
[GO:0035622 "intrahepatic bile duct development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 ZFIN:ZDB-GENE-040426-1469
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:1.10.260.40 SUPFAM:SSF47413
GeneTree:ENSGT00530000063019 GO:GO:0035622 CTD:3175
HOVERGEN:HBG005981 KO:K08026 OMA:QMEEVNT EMBL:BX908748
EMBL:BC056601 IPI:IPI00506676 RefSeq:NP_956867.1 UniGene:Dr.119167
SMR:Q6PHC9 STRING:Q6PHC9 Ensembl:ENSDART00000010177 GeneID:393545
KEGG:dre:393545 InParanoid:Q6PHC9 NextBio:20814566 Uniprot:Q6PHC9
Length = 461
Score = 234 (87.4 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 45/62 (72%), Positives = 54/62 (87%)
Query: 39 DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
++ + KKPRLVFTD+QRRTL AIFKE KRPSKE+Q+TI++QLGLE TV NFFMNARRR
Sbjct: 377 ERGNISKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELATVSNFFMNARRR 436
Query: 99 SM 100
S+
Sbjct: 437 SL 438
>MGI|MGI:1891409 [details] [associations]
symbol:Onecut3 "one cut domain, family member 3"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Reactome:REACT_13641 InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
MGI:MGI:1891409 GO:GO:0005829 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 Reactome:REACT_127416 GO:GO:0031018
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
eggNOG:NOG307335 HOGENOM:HOG000232114 HOVERGEN:HBG005981
HSSP:O08755 CTD:390874 OMA:HPAMGMA OrthoDB:EOG4ZS93X EMBL:AY080897
EMBL:BC058700 IPI:IPI00170291 RefSeq:NP_631972.2 UniGene:Mm.250572
ProteinModelPortal:Q8K557 SMR:Q8K557 STRING:Q8K557 PRIDE:Q8K557
Ensembl:ENSMUST00000051773 GeneID:246086 KEGG:mmu:246086
UCSC:uc007gdn.1 InParanoid:Q8K557 ChiTaRS:ONECUT3 NextBio:387067
Bgee:Q8K557 CleanEx:MM_ONECUT3 Genevestigator:Q8K557 Uniprot:Q8K557
Length = 490
Score = 234 (87.4 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 48/66 (72%), Positives = 54/66 (81%)
Query: 35 DISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
D ++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQ TI++QLGLE TV NFFMN
Sbjct: 402 DQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQATISQQLGLELNTVSNFFMN 461
Query: 95 ARRRSM 100
ARRR M
Sbjct: 462 ARRRCM 467
>ZFIN|ZDB-GENE-050208-744 [details] [associations]
symbol:onecut3 "one cut homeobox 3" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001889 "liver development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 ZFIN:ZDB-GENE-050208-744
GO:GO:0005634 GO:GO:0043565 GO:GO:0001889 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 CTD:390874
EMBL:BX088720 IPI:IPI00502134 RefSeq:XP_694209.1 UniGene:Dr.95331
Ensembl:ENSDART00000078885 GeneID:565854 KEGG:dre:565854
NextBio:20887777 Bgee:F1Q5P3 Uniprot:F1Q5P3
Length = 451
Score = 231 (86.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 46/61 (75%), Positives = 54/61 (88%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
++++ PKK RLVFTDLQRRTL AIFKE KRPSKEMQ+TI++QLGLE +TV NFFMNARR
Sbjct: 361 KERNMAPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQLTISQQLGLELSTVSNFFMNARR 420
Query: 98 R 98
R
Sbjct: 421 R 421
>ZFIN|ZDB-GENE-020531-1 [details] [associations]
symbol:onecutl "one cut domain, family member, like"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
ZFIN:ZDB-GENE-020531-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 eggNOG:NOG307335
HOGENOM:HOG000232114 HOVERGEN:HBG005981 EMBL:BX248517
IPI:IPI00632148 UniGene:Dr.159955 SMR:A2BF65
Ensembl:ENSDART00000121764 Ensembl:ENSDART00000150028
InParanoid:A2BF65 OMA:RENHRPT OrthoDB:EOG4KH2VH Uniprot:A2BF65
Length = 450
Score = 216 (81.1 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 40/62 (64%), Positives = 54/62 (87%)
Query: 39 DQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
+++ PK+ RLVFTDLQRRTL AIF+E RP+K++Q+TI++QLGLE +TV NFFMNARRR
Sbjct: 360 ERNQGPKRTRLVFTDLQRRTLMAIFRENHRPTKDLQITISQQLGLELSTVSNFFMNARRR 419
Query: 99 SM 100
++
Sbjct: 420 NL 421
>WB|WBGene00000459 [details] [associations]
symbol:ceh-38 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
eggNOG:NOG307335 EMBL:FO080140 RefSeq:NP_741017.1
RefSeq:NP_741018.1 UniGene:Cel.5360 ProteinModelPortal:Q19720
SMR:Q19720 IntAct:Q19720 STRING:Q19720 PaxDb:Q19720 PRIDE:Q19720
EnsemblMetazoa:F22D3.1b GeneID:174136 KEGG:cel:CELE_F22D3.1
UCSC:F22D3.1b CTD:174136 WormBase:F22D3.1a WormBase:F22D3.1b
HOGENOM:HOG000019385 InParanoid:Q19720 OMA:STQDSND NextBio:882681
Uniprot:Q19720
Length = 641
Score = 214 (80.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 43/63 (68%), Positives = 50/63 (79%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S K+PRLVFTD+Q+RTLQAIFKET+RPS+EMQ TIA L L+ +TV NFFMNAR
Sbjct: 420 SDHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNAR 479
Query: 97 RRS 99
RRS
Sbjct: 480 RRS 482
>WB|WBGene00000444 [details] [associations]
symbol:ceh-21 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
EMBL:AJ427855 EMBL:FO080541 EMBL:AF023470 PIR:T28912 PIR:T42240
RefSeq:NP_508341.2 UniGene:Cel.9167 ProteinModelPortal:Q22811
SMR:Q22811 STRING:Q22811 PaxDb:Q22811 EnsemblMetazoa:T26C11.6
GeneID:180504 KEGG:cel:CELE_T26C11.6 UCSC:T26C11.6.2 CTD:180504
WormBase:T26C11.6 eggNOG:NOG307335 InParanoid:Q22811 NextBio:909656
Uniprot:Q22811
Length = 495
Score = 134 (52.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 40 QSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
+ T K RL FT+ Q ++LQ F++ RP++EM+ ++ L L+ +TVGNFFMN+RRR
Sbjct: 387 RKKTVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTVGNFFMNSRRR 445
>UNIPROTKB|E2QWY9 [details] [associations]
symbol:ONECUT3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF02376 PROSITE:PS51042 GO:GO:0003677 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 GO:GO:0005667 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 OMA:HPAMGMA
EMBL:AAEX03012630 EMBL:AAEX03012631 EMBL:AAEX03012632
Ensembl:ENSCAFT00000030959 Uniprot:E2QWY9
Length = 440
Score = 133 (51.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEM 73
++++ PKK RLVFTDLQRRTL AIFKE KRPSKEM
Sbjct: 405 KERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEM 440
>WB|WBGene00000460 [details] [associations]
symbol:ceh-39 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0007538 "primary sex determination" evidence=IGI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000794
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
GO:GO:0007538 GO:GO:0043073 EMBL:FO080541 eggNOG:NOG307335
PIR:T28913 RefSeq:NP_508342.1 ProteinModelPortal:Q22812 SMR:Q22812
STRING:Q22812 PaxDb:Q22812 EnsemblMetazoa:T26C11.7 GeneID:180505
KEGG:cel:CELE_T26C11.7 UCSC:T26C11.7 CTD:180505 WormBase:T26C11.7
InParanoid:Q22812 NextBio:909660 Uniprot:Q22812
Length = 399
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 40 QSSTPKKPRL---VFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
+ +TP R+ FT Q +L +F++ RP++EMQ ++ L L +TVGNFFMNAR
Sbjct: 310 RQTTPSDERIRRFTFTQTQLDSLHTVFQQQDRPNREMQQALSATLKLNRSTVGNFFMNAR 369
Query: 97 RR 98
RR
Sbjct: 370 RR 371
>UNIPROTKB|F1S229 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CU179728
Ensembl:ENSSSCT00000006937 Uniprot:F1S229
Length = 295
Score = 103 (41.3 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 34 PDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFM 93
P+ +D PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F
Sbjct: 99 PEDGKDHKR-PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQ 157
Query: 94 NARRR 98
N R +
Sbjct: 158 NQRAK 162
>UNIPROTKB|I3L863 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 OMA:GNAGMEG EMBL:CU179728 Ensembl:ENSSSCT00000032564
Uniprot:I3L863
Length = 296
Score = 103 (41.3 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 34 PDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFM 93
P+ +D PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F
Sbjct: 99 PEDGKDHKR-PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQ 157
Query: 94 NARRR 98
N R +
Sbjct: 158 NQRAK 162
>ZFIN|ZDB-GENE-050114-3 [details] [associations]
symbol:lmx1ba "LIM homeobox transcription factor 1,
beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0021592 "fourth ventricle
development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-050114-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060041 GeneTree:ENSGT00700000104050 GO:GO:0030917
GO:GO:0061386 HOGENOM:HOG000231629 GO:GO:0021592 HOVERGEN:HBG052335
EMBL:BX511196 EMBL:CABZ01060115 EMBL:CABZ01060116 EMBL:CABZ01060117
EMBL:CABZ01060118 EMBL:CABZ01060119 EMBL:CABZ01084097
EMBL:CABZ01084098 EMBL:CABZ01084099 EMBL:CABZ01084100 EMBL:AY551078
IPI:IPI00616332 UniGene:Dr.94065 Ensembl:ENSDART00000126544
Uniprot:Q4L1M5
Length = 375
Score = 102 (41.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 35 DISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
D S+D PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N
Sbjct: 184 DDSKDPRR-PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 242
Query: 95 ARRR 98
R +
Sbjct: 243 QRAK 246
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 100 (40.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 111 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 165
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 100 (40.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 111 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 165
>ZFIN|ZDB-GENE-041014-332 [details] [associations]
symbol:lmx1a "LIM homeobox transcription factor 1,
alpha" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-041014-332 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
HOGENOM:HOG000231629 CTD:4009 HOVERGEN:HBG052335 EMBL:BX296562
IPI:IPI00496510 RefSeq:NP_001020669.1 UniGene:Dr.108111
Ensembl:ENSDART00000019059 GeneID:558036 KEGG:dre:558036
eggNOG:NOG302270 InParanoid:Q5RI65 OMA:RLYSMQD OrthoDB:EOG4P8FJW
NextBio:20882278 Uniprot:Q5RI65
Length = 366
Score = 101 (40.6 bits), Expect = 0.00010, P = 0.00010
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 35 DISQD-QSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFM 93
+I+ D + PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F
Sbjct: 175 NITGDVEHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQ 234
Query: 94 NARRR 98
N R +
Sbjct: 235 NQRAK 239
>WB|WBGene00000462 [details] [associations]
symbol:ceh-41 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:FO080541 PIR:T28911 RefSeq:NP_508340.1
ProteinModelPortal:Q22810 SMR:Q22810 IntAct:Q22810 PaxDb:Q22810
EnsemblMetazoa:T26C11.5 GeneID:180503 KEGG:cel:CELE_T26C11.5
UCSC:T26C11.5 CTD:180503 WormBase:T26C11.5 InParanoid:Q22810
NextBio:909652 Uniprot:Q22810
Length = 278
Score = 99 (39.9 bits), Expect = 0.00010, P = 0.00010
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 41 SSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
SS PKK + FT+ + + A+F+ K P+ E +A QL L +V NFFMN R +
Sbjct: 208 SSPPKKTKSPFTEHEIAVMMALFEINKSPNHEEVQKLAVQLNLGYRSVANFFMNKRAK 265
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 151 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 205
>UNIPROTKB|F1MC25 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 CTD:4009 KO:K09371 OMA:GNAGMEG EMBL:DAAA02006817
EMBL:DAAA02006818 EMBL:DAAA02006819 EMBL:DAAA02006820
EMBL:DAAA02006821 EMBL:DAAA02006822 IPI:IPI00701360
RefSeq:NP_001178254.1 UniGene:Bt.106456 Ensembl:ENSBTAT00000015947
GeneID:510296 KEGG:bta:510296 NextBio:20869365 Uniprot:F1MC25
Length = 382
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S+D PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 189 SKDHKR-PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 247
Query: 97 RR 98
+
Sbjct: 248 AK 249
>WB|WBGene00002988 [details] [associations]
symbol:lim-6 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030421 "defecation"
evidence=IMP] [GO:0060756 "foraging behavior" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009449 "gamma-aminobutyric acid
biosynthetic process" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0061038 "uterus morphogenesis"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007409 GO:GO:0010468 GO:GO:0030421
GeneTree:ENSGT00700000104050 GO:GO:0009449 eggNOG:NOG243427
GO:GO:0061038 EMBL:FO080324 GeneID:180459 KEGG:cel:CELE_K03E6.1
CTD:180459 GO:GO:0060756 RefSeq:NP_001256980.1
ProteinModelPortal:Q21192 SMR:Q21192 PaxDb:Q21192
EnsemblMetazoa:K03E6.1b UCSC:K03E6.1 WormBase:K03E6.1b
HOGENOM:HOG000018451 InParanoid:Q21192 OMA:HGNIYCE NextBio:909480
ArrayExpress:Q21192 Uniprot:Q21192
Length = 316
Score = 99 (39.9 bits), Expect = 0.00013, P = 0.00013
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S+ TPK+PR + QRR + F+ + +PS++++ +A + GL V +F N R
Sbjct: 179 SEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 238
Query: 97 RR 98
+
Sbjct: 239 AK 240
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 250
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 250
>ZFIN|ZDB-GENE-050114-2 [details] [associations]
symbol:lmx1bb "LIM homeobox transcription factor 1,
beta b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0042472
"inner ear morphogenesis" evidence=IMP] [GO:0021592 "fourth
ventricle development" evidence=IGI] [GO:0060117 "auditory receptor
cell development" evidence=IMP] [GO:0032474 "otolith morphogenesis"
evidence=IMP] [GO:0048752 "semicircular canal morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] [GO:0061386 "closure of optic fissure"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-050114-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0060041 GO:GO:0032474
GO:GO:0048752 GO:GO:0030917 GO:GO:0060117 GO:GO:0061386
GO:GO:0021592 HOVERGEN:HBG052335 KO:K09371 EMBL:AY894989
IPI:IPI00631669 RefSeq:NP_001020338.2 UniGene:Dr.108678
ProteinModelPortal:Q4VJ29 STRING:Q4VJ29 GeneID:554360
KEGG:dre:554360 CTD:554360 InParanoid:Q4VJ29 NextBio:20880753
Uniprot:Q4VJ29
Length = 375
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 194 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 248
>UNIPROTKB|F1NDZ5 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002930 "trabecular meshwork
development" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021587
"cerebellum morphogenesis" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0035108 "limb morphogenesis"
evidence=IEA] [GO:0035265 "organ growth" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 IPI:IPI00599399 OMA:NRMEGMM
EMBL:AADN02026296 EMBL:AADN02026297 EMBL:AADN02026298
EMBL:AADN02031658 Ensembl:ENSGALT00000001376 Uniprot:F1NDZ5
Length = 377
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>UNIPROTKB|P53413 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
EMBL:L39880 EMBL:U41823 IPI:IPI00599399 RefSeq:NP_990689.1
UniGene:Gga.758 ProteinModelPortal:P53413 STRING:P53413
GeneID:396312 KEGG:gga:396312 CTD:4010 InParanoid:P53413
NextBio:20816360 Uniprot:P53413
Length = 377
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 250
>UNIPROTKB|F1PDJ1 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 CTD:4009 KO:K09371 OMA:GNAGMEG
EMBL:AAEX03018391 EMBL:AAEX03018392 RefSeq:XP_851352.2
Ensembl:ENSCAFT00000021142 GeneID:609061 KEGG:cfa:609061
Uniprot:F1PDJ1
Length = 382
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>UNIPROTKB|Q8TE12 [details] [associations]
symbol:LMX1A "LIM homeobox transcription factor 1-alpha"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021542 "dentate
gyrus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021953 "central nervous system
neuron differentiation" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 EMBL:CH471067 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953
EMBL:AY078398 EMBL:AY078391 EMBL:AY078392 EMBL:AY078393
EMBL:AY078394 EMBL:AY078395 EMBL:AY078396 EMBL:AY078397
EMBL:AK127724 EMBL:AL390730 EMBL:AL160058 EMBL:BC119743
EMBL:BC119744 IPI:IPI00152586 IPI:IPI00328299 RefSeq:NP_001167540.1
RefSeq:NP_796372.1 UniGene:Hs.667312 ProteinModelPortal:Q8TE12
SMR:Q8TE12 STRING:Q8TE12 PhosphoSite:Q8TE12 DMDM:27923801
PRIDE:Q8TE12 DNASU:4009 Ensembl:ENST00000294816
Ensembl:ENST00000342310 Ensembl:ENST00000367893 GeneID:4009
KEGG:hsa:4009 UCSC:uc001gcz.2 UCSC:uc021pdy.1 CTD:4009
GeneCards:GC01M165171 HGNC:HGNC:6653 HPA:HPA028051 HPA:HPA030088
MIM:600298 neXtProt:NX_Q8TE12 PharmGKB:PA30416 eggNOG:NOG243427
HOVERGEN:HBG052335 InParanoid:Q8TE12 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN PhylomeDB:Q8TE12 GenomeRNAi:4009 NextBio:15724
ArrayExpress:Q8TE12 Bgee:Q8TE12 CleanEx:HS_LMX1A
Genevestigator:Q8TE12 GermOnline:ENSG00000162761 Uniprot:Q8TE12
Length = 382
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>MGI|MGI:1888519 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10090 "Mus musculus" [GO:0001558 "regulation of cell
growth" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0007420
"brain development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021542 "dentate gyrus development" evidence=IMP]
[GO:0021549 "cerebellum development" evidence=IMP] [GO:0021766
"hippocampus development" evidence=IMP] [GO:0021953 "central
nervous system neuron differentiation" evidence=IMP] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1888519 GO:GO:0005634 GO:GO:0007411
GO:GO:0001558 GO:GO:0046872 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0010468 GeneTree:ENSGT00700000104050
GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953 CTD:4009
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN EMBL:AF226662 IPI:IPI00123446 RefSeq:NP_387501.1
UniGene:Mm.330081 ProteinModelPortal:Q9JKU8 SMR:Q9JKU8
STRING:Q9JKU8 PhosphoSite:Q9JKU8 PRIDE:Q9JKU8
Ensembl:ENSMUST00000028003 Ensembl:ENSMUST00000111377 GeneID:110648
KEGG:mmu:110648 InParanoid:Q9JKU8 NextBio:364391 Bgee:Q9JKU8
CleanEx:MM_LMX1A Genevestigator:Q9JKU8
GermOnline:ENSMUSG00000026686 Uniprot:Q9JKU8
Length = 382
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>RGD|1304784 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10116 "Rattus norvegicus" [GO:0001558 "regulation of cell
growth" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007417 "central nervous system development" evidence=ISO]
[GO:0007420 "brain development" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0021542 "dentate gyrus development"
evidence=IEA;ISO] [GO:0021549 "cerebellum development"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=ISO] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 RGD:1304784
GO:GO:0005634 GO:GO:0007411 GO:GO:0007420 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021549 GO:GO:0030901
GeneTree:ENSGT00700000104050 GO:GO:0021542 GO:GO:0021953 CTD:4009
KO:K09371 OMA:GNAGMEG IPI:IPI00869778 RefSeq:NP_001099437.2
UniGene:Rn.137284 Ensembl:ENSRNOT00000006163 GeneID:289201
KEGG:rno:289201 NextBio:629386 ArrayExpress:F1LRJ8 Uniprot:F1LRJ8
Length = 382
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 195 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
>UNIPROTKB|B7ZLH2 [details] [associations]
symbol:LMX1B "LMX1B protein" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 HOGENOM:HOG000231629 HOVERGEN:HBG052335 KO:K09371
CTD:4010 EMBL:AL161908 EMBL:AL161731 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 PharmGKB:PA30417
GenomeRNAi:4010 NextBio:15732 EMBL:BC143801 IPI:IPI00956472
RefSeq:NP_001167617.1 SMR:B7ZLH2 STRING:B7ZLH2
Ensembl:ENST00000561065 Uniprot:B7ZLH2
Length = 383
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 196 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 250
>UNIPROTKB|E1C2D6 [details] [associations]
symbol:E1C2D6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021542 "dentate gyrus development"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001558 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
EMBL:AADN02034025 EMBL:AADN02034026 EMBL:AADN02034027
EMBL:AADN02034028 EMBL:AADN02034029 IPI:IPI00590021
Ensembl:ENSGALT00000005411 OMA:XKSDDEE Uniprot:E1C2D6
Length = 386
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 200 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 254
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 100 (40.3 bits), Expect = 0.00015, P = 0.00014
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 273
>UNIPROTKB|Q8UVR3 [details] [associations]
symbol:lmx1b.1 "LIM homeobox transcription factor 1-beta.1"
species:8355 "Xenopus laevis" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0039020 "pronephric nephron tubule development"
evidence=IMP] [GO:0072013 "glomus development" evidence=IEP;IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0072013
GO:GO:0039020 HOVERGEN:HBG052335 KO:K09371 EMBL:AF414086
RefSeq:NP_001083902.1 UniGene:Xl.12464 HSSP:P50480
ProteinModelPortal:Q8UVR3 GeneID:399182 KEGG:xla:399182 CTD:399182
Xenbase:XB-GENE-494754 Uniprot:Q8UVR3
Length = 400
Score = 100 (40.3 bits), Expect = 0.00015, P = 0.00015
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 218 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 272
>UNIPROTKB|F8W7W6 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
UniGene:Hs.129133 DNASU:4010 GeneID:4010 KEGG:hsa:4010
HGNC:HGNC:6654 GenomeRNAi:4010 NextBio:15732 OMA:NRMEGMM
IPI:IPI00956472 RefSeq:NP_001167617.1 ProteinModelPortal:F8W7W6
SMR:F8W7W6 Ensembl:ENST00000355497 UCSC:uc011maa.2
ArrayExpress:F8W7W6 Bgee:F8W7W6 Uniprot:F8W7W6
Length = 406
Score = 100 (40.3 bits), Expect = 0.00015, P = 0.00015
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 44 PKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRR 98
PK+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R +
Sbjct: 219 PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 273
>UNIPROTKB|H9L043 [details] [associations]
symbol:H9L043 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02053375
Ensembl:ENSGALT00000021923 OMA:CECERRL Uniprot:H9L043
Length = 280
Score = 94 (38.1 bits), Expect = 0.00037, P = 0.00037
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 37 SQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNAR 96
S+D + K+PR + T QRR +A F+ + +P ++++ T+A + GL V +F N R
Sbjct: 97 SKDHKRS-KRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQR 155
Query: 97 RR 98
+
Sbjct: 156 AK 157
>WB|WBGene00000464 [details] [associations]
symbol:ceh-44 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0030173 "integral to Golgi membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 KO:K09313 EMBL:FO081806
GeneID:175372 KEGG:cel:CELE_Y54F10AM.4 UCSC:Y54F10AM.4c CTD:175372
GeneTree:ENSGT00530000063019 NextBio:887866 RefSeq:NP_497576.1
ProteinModelPortal:Q9BL02 SMR:Q9BL02 PRIDE:Q9BL02
EnsemblMetazoa:Y54F10AM.4a.1 EnsemblMetazoa:Y54F10AM.4a.2
WormBase:Y54F10AM.4a HOGENOM:HOG000019069 InParanoid:Q9BL02
ArrayExpress:Q9BL02 Uniprot:Q9BL02
Length = 1273
Score = 99 (39.9 bits), Expect = 0.00081, P = 0.00081
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 37 SQDQSSTPKKP--RLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
+ D KKP R V TD Q+ TL+ +F + PS E+ I+ +L + TV N+F N
Sbjct: 1094 TDDYDLNTKKPIQRTVITDYQKDTLRFVFVNEQHPSNELCEQISLKLDMSLRTVQNWFHN 1153
Query: 95 ARRRS 99
R RS
Sbjct: 1154 HRTRS 1158
>FB|FBgn0052105 [details] [associations]
symbol:CG32105 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
eggNOG:NOG243427 HSSP:P50480 EMBL:BT003467 RefSeq:NP_729801.1
UniGene:Dm.15353 SMR:Q9VTW5 IntAct:Q9VTW5 MINT:MINT-307196
EnsemblMetazoa:FBtr0075953 GeneID:39406 KEGG:dme:Dmel_CG32105
UCSC:CG32105-RB FlyBase:FBgn0052105 InParanoid:Q9VTW5 OMA:CCHAILP
OrthoDB:EOG4BCC40 GenomeRNAi:39406 NextBio:813485 Uniprot:Q9VTW5
Length = 640
Score = 95 (38.5 bits), Expect = 0.00097, P = 0.00097
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 38 QDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARR 97
+D PK+PR + T QR+ +A F ++ +P ++++ +A+ GL V +F N R
Sbjct: 418 RDGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRA 477
Query: 98 R 98
+
Sbjct: 478 K 478
>MGI|MGI:94904 [details] [associations]
symbol:Dlx4 "distal-less homeobox 4" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:94904
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104129 HOGENOM:HOG000231941
HOVERGEN:HBG005493 KO:K09314 CTD:1748 eggNOG:NOG240888 OMA:YSGPYGH
OrthoDB:EOG42822M EMBL:U73329 EMBL:AF452637 EMBL:AK145123
EMBL:AL645850 EMBL:BC106967 IPI:IPI00109289 RefSeq:NP_031893.3
UniGene:Mm.439766 ProteinModelPortal:P70436 SMR:P70436
IntAct:P70436 STRING:P70436 PRIDE:P70436 Ensembl:ENSMUST00000021241
GeneID:13394 KEGG:mmu:13394 UCSC:uc007kzz.2 InParanoid:P70436
NextBio:283768 Bgee:P70436 CleanEx:MM_DLX4 Genevestigator:P70436
GermOnline:ENSMUSG00000020871 Uniprot:P70436
Length = 240
Score = 89 (36.4 bits), Expect = 0.00098, P = 0.00098
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 37 SQDQSSTPK--KPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMN 94
SQ QS T K KPR +++ LQ + L F+ T+ + + +A QLGL T V +F N
Sbjct: 107 SQQQSLTRKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQN 166
Query: 95 ARRR 98
R +
Sbjct: 167 KRSK 170
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.131 0.358 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 111 69 0.00091 102 3 10 22 0.41 28
29 0.39 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 60
No. of states in DFA: 473 (50 KB)
Total size of DFA: 92 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 13.27u 0.09s 13.36t Elapsed: 00:00:11
Total cpu time: 13.28u 0.09s 13.37t Elapsed: 00:00:14
Start: Thu Aug 15 12:23:03 2013 End: Thu Aug 15 12:23:17 2013