BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15974
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8T3C8|MTFP1_CAEEL Mitochondrial fission process protein 1 OS=Caenorhabditis elegans
GN=mtp-18 PE=3 SV=2
Length = 166
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 13/134 (9%)
Query: 31 YANEVGEAFRAVVHRQVVNASYGIASLYVLADVTAKTIQAW---HSTE-HNAGRVAKIGI 86
YANEVGEAFR++V VV SY +A YV AD K +Q + HST +VA +
Sbjct: 23 YANEVGEAFRSLVKPVVVKFSYVVAFGYVAADSIDKGLQEYIKTHSTSTEKTKKVAIAAV 82
Query: 87 DALLWQSLASVAVPGLAINRICYLSRALFAR-------WRQGQVATVVTGLVSIPCVIHP 139
D +LWQ+ ASV +PG INR C+ S L + R+ V + GL +IP ++HP
Sbjct: 83 DTVLWQTFASVLIPGFTINRFCFFSNLLLQKSTKLPTNMRKWTVTCL--GLATIPFIVHP 140
Query: 140 IDWAVTEAMDLTVR 153
ID V EAMD T R
Sbjct: 141 IDSFVEEAMDKTAR 154
>sp|Q9UDX5|MTFP1_HUMAN Mitochondrial fission process protein 1 OS=Homo sapiens GN=MTFP1
PE=1 SV=1
Length = 166
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 8/131 (6%)
Query: 31 YANEVGEAFRAVVHRQVVNASYGIASLYVLADVTAKTIQAWHSTEHNAGRVAKIG---ID 87
YANEVGEAFR++V VV SYG+AS YVLAD K +A AGR A++ +D
Sbjct: 24 YANEVGEAFRSLVPAAVVWLSYGVASSYVLADAIDKGKKAGEVPSPEAGRSARVTVAVVD 83
Query: 88 ALLWQSLASVAVPGLAINRICYLSRALFA---RWRQG--QVATVVTGLVSIPCVIHPIDW 142
+WQ+LASVA+PG INR+C S + RW + T GL++IP +IHPID
Sbjct: 84 TFVWQALASVAIPGFTINRVCAASLYVLGTATRWPLAVRKWTTTALGLLTIPIIIHPIDR 143
Query: 143 AVTEAMDLTVR 153
+V +D ++R
Sbjct: 144 SVDFLLDSSLR 154
>sp|B6IJ52|MTFP1_CAEBR Mitochondrial fission process protein 1 OS=Caenorhabditis briggsae
GN=mtp-18 PE=3 SV=1
Length = 162
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 13/139 (9%)
Query: 26 FIFTRYANEVGEAFRAVVHRQVVNASYGIASLYVLADVTAKTIQAWHSTEHN----AGRV 81
F+ RYANEVGEAFR++V VV SY +A YV AD K + N A RV
Sbjct: 21 FLGKRYANEVGEAFRSLVKPVVVKFSYVVAFGYVAADSVDKGFKESKKPHANDTEKAKRV 80
Query: 82 AKIGIDALLWQSLASVAVPGLAINRICYLSRALFAR-------WRQGQVATVVTGLVSIP 134
A I +D +LWQ+ ASV +PG INR C+ + L + R+ V + GL +IP
Sbjct: 81 AIIAVDTVLWQTFASVLIPGFTINRFCFFTNMLLEKSTKLPTNLRKWTVTAL--GLATIP 138
Query: 135 CVIHPIDWAVTEAMDLTVR 153
++HPID V +AM+ T R
Sbjct: 139 FIVHPIDAFVEDAMNKTAR 157
>sp|Q9CRB8|MTFP1_MOUSE Mitochondrial fission process protein 1 OS=Mus musculus GN=Mtfp1
PE=1 SV=1
Length = 166
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 31 YANEVGEAFRAVVHRQVVNASYGIASLYVLADVTAKTIQAWHSTEHNAGRVAKIG---ID 87
YANEVGEAFR++V VV SYG++S YVLAD K +A AGR ++ +D
Sbjct: 24 YANEVGEAFRSLVPAAVVWLSYGVSSSYVLADAIDKGKKAGEVPSPEAGRNTRMALAVVD 83
Query: 88 ALLWQSLASVAVPGLAINRICYLS---RALFARWRQG--QVATVVTGLVSIPCVIHPIDW 142
+WQSLASVA+PG INR+C S W + T GL++IP +IHPID
Sbjct: 84 TFVWQSLASVAIPGFTINRLCAASLYVLGTMTHWPPTVRKWTTTTLGLLAIPVIIHPIDR 143
Query: 143 AVTEAMDLTVR 153
+V +D ++R
Sbjct: 144 SVDFLLDSSLR 154
>sp|Q6PCS6|MTFP1_DANRE Mitochondrial fission process protein 1 OS=Danio rerio GN=mtfp1
PE=2 SV=1
Length = 165
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 28 FTRYANEVGEAFRAVVHRQVVNASYGIASLYVLADVTAKTIQAWHSTEHNAGR---VAKI 84
F YANEVGEAFRA+V V ASYG+A+ YV AD K +A + G+ V
Sbjct: 22 FLGYANEVGEAFRALVPVGAVWASYGVATTYVTADAIDKGRKAAAAHGERPGKAVCVCVA 81
Query: 85 GIDALLWQSLASVAVPGLAINRICYLSRALFARWRQGQV-----ATVVTGLVSIPCVIHP 139
+D +WQ+LASVAVPG INR+C S L +R + + T GL +IP +I P
Sbjct: 82 VVDTFVWQALASVAVPGFTINRVCAASHFLLSRTTRWPLPVRKWTTTAIGLSTIPFIITP 141
Query: 140 IDWAVTEAMDLTVRPYLLHVRVNKEE 165
ID +V +D ++R L+ KE+
Sbjct: 142 IDRSVDLLLDSSLRK--LYSEGEKED 165
>sp|Q5UNZ8|YR740_MIMIV Uncharacterized protein R740 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R740 PE=4 SV=1
Length = 187
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 10/138 (7%)
Query: 24 SIFIFTRYANEVGEAFRAVVHRQVVNASYGIASLYVLADVTAKTIQAWH-----STEHNA 78
S F YA++VGEA R Q V++ Y + Y+ D+ + H +
Sbjct: 29 SGFRMASYASDVGEATRGTFPNQFVHSMYAVTISYIFVDLYFRYKDNKHLSNNKQCDSKM 88
Query: 79 GRVAKIGIDALLWQSLASVAVPGLAINRICYLSRALFA--RWRQGQV---ATVVTGLVSI 133
K LW + AS+ P + I+ I ++ A W +V A V L I
Sbjct: 89 TEFQKYMGYHTLWHAQASLFFPTITIHSIVSSTKEFTANINWLNPKVKKFAPVCLSLALI 148
Query: 134 PCVIHPIDWAVTEAMDLT 151
PC+I PID + MD +
Sbjct: 149 PCLIKPIDDLADKIMDYS 166
>sp|Q2W4W4|HIS3_MAGSA Phosphoribosyl-AMP cyclohydrolase OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=hisI PE=3 SV=1
Length = 132
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 75 EHNAGRVAKIGIDALLWQSLASVAVPGLAINRICYLSRALFARWRQGQVA 124
+H+ G V + W + SVA LA R+CY SR+ WR+G+ +
Sbjct: 27 QHDTGEVL-----MMAWMNAESVAET-LATGRVCYFSRSRGGLWRKGETS 70
>sp|Q0BTI5|HIS3_GRABC Phosphoribosyl-AMP cyclohydrolase OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=hisI PE=3 SV=1
Length = 128
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 75 EHNAGRVAKIGIDALLWQSLASVAVPGLAINRICYLSRALFARWRQGQVATVVTGLVSI 133
+H+ G V L W + ++ LA R+CY SR+ WR+G+ + V L+ +
Sbjct: 22 QHDTGEVL-----MLAWMNREAIEET-LATGRVCYFSRSRNGLWRKGETSGQVQTLIEL 74
>sp|Q1QAF3|LEUD_PSYCK 3-isopropylmalate dehydratase small subunit OS=Psychrobacter
cryohalolentis (strain K5) GN=leuD PE=3 SV=1
Length = 216
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 7 NCFDNGAPKYFLDRQIVSIFIFTRYANEVGEAFRAVVHRQVVNASYGIASLYVLAD 62
NCF NG LD +IV + +ANE G A + RQVV G + + D
Sbjct: 119 NCFKNGMLPIVLDEEIVDSLMKATFANE-GYELTADLERQVVITPTGEEYAFEVDD 173
>sp|Q4FRU8|LEUD_PSYA2 3-isopropylmalate dehydratase small subunit OS=Psychrobacter
arcticus (strain DSM 17307 / 273-4) GN=leuD PE=3 SV=1
Length = 216
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 7 NCFDNGAPKYFLDRQIVSIFIFTRYANEVGEAFRAVVHRQVVNASYGIASLYVLAD 62
NCF NG LD +IV + +ANE G A + RQVV G + + D
Sbjct: 119 NCFKNGMLPIVLDEEIVDSLMKATFANE-GYELTADLERQVVITPTGEEYAFEVDD 173
>sp|Q1QWC3|HIS3_CHRSD Phosphoribosyl-AMP cyclohydrolase OS=Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=hisI
PE=3 SV=1
Length = 146
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 73 STEHNAGRVAKIGIDALLWQSLASVAVPGLAINRICYLSRALFARWRQGQVATVVTGLVS 132
+ +H++G V + W + A++ LA R+CY SR+ WR+G+ + V LV+
Sbjct: 38 AQQHDSGEVLMMA-----WMNRAALEET-LATGRVCYWSRSRGKPWRKGESSGQVQQLVT 91
>sp|A5G0S8|HIS3_ACICJ Phosphoribosyl-AMP cyclohydrolase OS=Acidiphilium cryptum (strain
JF-5) GN=hisI PE=3 SV=1
Length = 116
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 75 EHNAGRVAKIGIDALLWQSLASVAVPGLAINRICYLSRALFARWRQGQVATVVTGLVSI 133
+H+ G V + W + S+A L+ ++CY SR+ WR+G+ + V LV +
Sbjct: 23 QHDTGEVLMMA-----WMNAESIA-ESLSTGQVCYFSRSRGKLWRKGESSGHVQRLVEM 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.136 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,353,133
Number of Sequences: 539616
Number of extensions: 1852304
Number of successful extensions: 5025
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5005
Number of HSP's gapped (non-prelim): 17
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)