BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15979
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q63638|SPEG_RAT Striated muscle-specific serine/threonine-protein kinase OS=Rattus
norvegicus GN=Speg PE=2 SV=2
Length = 3259
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55
L + R ++ G RHTL++R+ A+D G+Y+ ATN +G+ L+ +P
Sbjct: 767 LHSEGRLLIRAEGERHTLLLREAQAADAGSYTATATNELGQASCASSLAVRPG 819
>sp|Q62407|SPEG_MOUSE Striated muscle-specific serine/threonine-protein kinase OS=Mus
musculus GN=Speg PE=1 SV=2
Length = 3262
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55
L + R ++ G RHTL++R+ A+D G+Y+ ATN +G+ L+ +P
Sbjct: 767 LHSEGRLLIRAEGERHTLLLREAQAADAGSYTATATNELGQATCASSLAVRPG 819
>sp|Q15772|SPEG_HUMAN Striated muscle preferentially expressed protein kinase OS=Homo
sapiens GN=SPEG PE=1 SV=4
Length = 3267
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55
L + R ++ G RHTL++R+ A+D G+Y ATN +G+ L+ +P
Sbjct: 762 LRSEGRLLLRAEGERHTLLLREARAADAGSYMATATNELGQATCAASLTVRPG 814
>sp|P70193|LRIG1_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 1
OS=Mus musculus GN=Lrig1 PE=2 SV=2
Length = 1091
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 20 LMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57
L+++ V+ D G Y+CE +NP+G RA+ +LS P P
Sbjct: 750 LVVQNVMIDDAGRYTCEMSNPLGTERAHSQLSILPTPG 787
>sp|O55005|ROBO1_RAT Roundabout homolog 1 OS=Rattus norvegicus GN=Robo1 PE=1 SV=1
Length = 1651
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
HTL IRKV A D G+Y+C A N +GK A L+
Sbjct: 313 HTLKIRKVTAGDMGSYTCVAENMVGKAEASATLT 346
>sp|Q9Y6N7|ROBO1_HUMAN Roundabout homolog 1 OS=Homo sapiens GN=ROBO1 PE=1 SV=1
Length = 1651
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
HTL IRKV A D G+Y+C A N +GK A L+
Sbjct: 313 HTLKIRKVTAGDMGSYTCVAENMVGKAEASATLT 346
>sp|O89026|ROBO1_MOUSE Roundabout homolog 1 OS=Mus musculus GN=Robo1 PE=1 SV=1
Length = 1612
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
HTL IRKV A D G+Y+C A N +GK A L+
Sbjct: 274 HTLKIRKVTAGDMGSYTCVAENMVGKAEASATLT 307
>sp|Q5IS61|OPCM_PANTR Opioid-binding protein/cell adhesion molecule OS=Pan troglodytes
GN=OPCML PE=2 SV=1
Length = 345
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 11 METRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNS 70
+E +G TL V D+GNY+C ATN +G A + L G P I + R +
Sbjct: 272 IENKGRMSTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYG-PGAVIDGVNSASR---A 327
Query: 71 YNITWMVSSYTPLEEFKIKY 90
W+ S T L F IK+
Sbjct: 328 LACLWL--SGTLLAHFFIKF 345
>sp|Q14982|OPCM_HUMAN Opioid-binding protein/cell adhesion molecule OS=Homo sapiens
GN=OPCML PE=1 SV=1
Length = 345
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 11 METRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNS 70
+E +G TL V D+GNY+C ATN +G A + L G P I + R +
Sbjct: 272 IENKGRMSTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYG-PGAVIDGVNSASR---A 327
Query: 71 YNITWMVSSYTPLEEFKIKY 90
W+ S T L F IK+
Sbjct: 328 LACLWL--SGTLLAHFFIKF 345
>sp|P11834|OPCM_BOVIN Opioid-binding protein/cell adhesion molecule OS=Bos taurus
GN=OPCML PE=1 SV=1
Length = 345
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 11 METRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNS 70
+E +G TL V D+GNY+C ATN +G A + L G P I + R +
Sbjct: 272 IENKGHISTLTFFNVSEKDYGNYTCVATNKLGITNASITLYG-PGAVIDGVNSASR---A 327
Query: 71 YNITWMVSSYTPLEEFKIKY 90
W+ S T F IK+
Sbjct: 328 LACLWL--SGTLFAHFFIKF 345
>sp|P32736|OPCM_RAT Opioid-binding protein/cell adhesion molecule OS=Rattus norvegicus
GN=Opcml PE=1 SV=2
Length = 345
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 11 METRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNS 70
+E +G TL V D+GNY+C ATN +G A + L G P I + R +
Sbjct: 272 IENKGRISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYG-PGAVIDGVNSASR---A 327
Query: 71 YNITWMVSSYTPLEEFKIKY 90
W+ ++ F IK+
Sbjct: 328 LACLWLSGTF--FAHFFIKF 345
>sp|Q98892|OBCAM_CHICK Opioid-binding protein/cell adhesion molecule homolog OS=Gallus
gallus GN=OPCML PE=1 SV=2
Length = 337
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 11 METRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52
+E++G TL V D+GNY+C ATN +G A + L G
Sbjct: 264 IESKGRLSTLTFFNVSEKDYGNYTCVATNKLGNTNASIILYG 305
>sp|Q8NDA2|HMCN2_HUMAN Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=2
Length = 5065
Score = 37.4 bits (85), Expect = 0.037, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQG 65
HTL + + SD G Y+CEA N G+ + ++LS PA FR P+G
Sbjct: 2991 HTLQLGRARLSDSGMYTCEALNAAGRDQKLVQLSVLVPPA-FRQAPRG 3037
Score = 33.1 bits (74), Expect = 0.61, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
++ TL+I+ V D GNYSC+ATN +G + + L
Sbjct: 658 AQGTLIIQGVAPEDAGNYSCQATNEVGTDQETVTL 692
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42
T +++ TRG R L + + +SD G Y+C+A+N +G
Sbjct: 1545 TSTKVVYTRGGRQ-LQLGRAQSSDAGVYTCKASNAVG 1580
Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42
L ++R ++ GS HTL I KV +D G ++C A +P G
Sbjct: 3354 LPLSQRTLLH--GSGHTLRISKVQLADAGIFTCVAASPAG 3391
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVS 78
+L I+ V+A D G+Y C A+N G R +L PAI P+ N+T ++
Sbjct: 3727 SLRIQPVLAQDAGHYLCLASNSAGSDRQGRDLRVLEPPAI--------APSPSNLT--LT 3776
Query: 79 SYTP 82
++TP
Sbjct: 3777 AHTP 3780
>sp|Q15746|MYLK_HUMAN Myosin light chain kinase, smooth muscle OS=Homo sapiens GN=MYLK
PE=1 SV=4
Length = 1914
Score = 37.4 bits (85), Expect = 0.037, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR 45
++ +E E RG++H+L I++V D G Y+CEA N G+ R
Sbjct: 663 IQESEDFHFEQRGTQHSLCIQEVFPEDTGTYTCEAWNSAGEVR 705
Score = 29.6 bits (65), Expect = 6.6, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
+L+I V D G Y+CEATN G + +EL+
Sbjct: 90 SLVIHAVHEEDRGKYTCEATNGSGARQVTVELT 122
>sp|Q96JA1|LRIG1_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 1
OS=Homo sapiens GN=LRIG1 PE=1 SV=2
Length = 1093
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 20 LMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54
L+++ VVA D G Y+CE +N +G RA+ +LS P
Sbjct: 748 LVVQNVVAEDAGRYTCEMSNTLGTERAHSQLSVLP 782
>sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans
GN=unc-89 PE=1 SV=3
Length = 8081
Score = 37.0 bits (84), Expect = 0.048, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 8 RRIMETRGSR--HTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
+ ++E +G HTL+I+ +DFG Y+C+ATN GK EL
Sbjct: 3625 QHVIEKKGENGSHTLVIKDTNNADFGKYTCQATNKAGKDETVGEL 3669
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP--NPAIFRSHPQGRLPNSY 71
+ HT+ I V G SCEATNP+G + ++L+ K + F + + RL
Sbjct: 2418 KDGEHTIEISAVTPEQAGELSCEATNPVGSKKRDVQLAVKKVGDAPTFAKNLEDRLITEG 2477
Query: 72 NITWM 76
+T M
Sbjct: 2478 ELTLM 2482
Score = 29.6 bits (65), Expect = 7.2, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHR 45
HTL I++ D G Y+C+ATN G+ +
Sbjct: 3539 HTLTIKQARGEDVGVYTCKATNEAGEAK 3566
>sp|Q3V1M1|IGS10_MOUSE Immunoglobulin superfamily member 10 OS=Mus musculus GN=Igsf10 PE=2
SV=2
Length = 2594
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA-IFRSH 62
TL I++V D G Y C A+NP+G ++ LS PA I SH
Sbjct: 1678 TLSIQRVSIQDRGQYLCAASNPLGVDHLHVTLSVVSYPARILESH 1722
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGK 43
TL+I++ A D GNY C+A N +G+
Sbjct: 2461 TLVIKETTAHDRGNYICKAQNSVGQ 2485
>sp|Q69Z26|CNTN4_MOUSE Contactin-4 OS=Mus musculus GN=Cntn4 PE=2 SV=2
Length = 1026
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 20 LMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFR 60
L I KV SD GNY+C TN + H+ G P P I R
Sbjct: 179 LYIAKVEKSDVGNYTCVVTNTVTNHKVL----GPPTPLILR 215
>sp|Q8IWV2|CNTN4_HUMAN Contactin-4 OS=Homo sapiens GN=CNTN4 PE=1 SV=1
Length = 1026
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 20 LMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFR 60
L I KV SD GNY+C TN + H+ G P P I R
Sbjct: 179 LYIAKVEKSDVGNYTCVVTNTVTNHKVL----GPPTPLILR 215
>sp|O97394|SDK_DROME Protein sidekick OS=Drosophila melanogaster GN=sdk PE=1 SV=2
Length = 2224
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 20 LMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPN----SYNITW 75
L I+ V ASD G+Y+C T+P G LS P + RLP S N++W
Sbjct: 605 LEIQAVRASDVGSYACVVTSPGGNETRAARLSVIELPFPPSNVKVERLPEPQQRSINVSW 664
Query: 76 M--VSSYTPLEEFKIKYRKIP------GNEPSPMSNQLT 106
+P+ +F I+ R++ G P P+ N +T
Sbjct: 665 TPGFDGNSPISKFIIQRREVSELEKFVGPVPDPLLNWIT 703
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 13 TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ 64
T + +TL+I+K++ D + C A N G++ A L K + I PQ
Sbjct: 411 TLNTDNTLVIKKLILDDAAMFQCLAINEAGENSASTWLRVKTSAPIMELPPQ 462
>sp|O35136|NCAM2_MOUSE Neural cell adhesion molecule 2 OS=Mus musculus GN=Ncam2 PE=1 SV=1
Length = 837
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELSGKPN 55
+E E+ I+ +GS L +R ++ D G+Y C+ATN G+ +A+L++ +P+
Sbjct: 251 IEENEKYIL--KGSNTELTVRNIINKDGGSYVCKATNKAGEDQKQAFLQVFVQPH 303
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 11 METRGS--RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
+E +G R +L IR V SD G Y CEA + +G H+ + L
Sbjct: 354 IEVKGQHGRSSLHIRDVKLSDSGRYDCEAASRIGGHQRSMHLD 396
>sp|Q90478|L1CA1_DANRE Neural cell adhesion molecule L1.1 (Fragment) OS=Danio rerio
GN=nadl1.1 PE=2 SV=1
Length = 1197
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 28/127 (22%)
Query: 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSGKPNPAIFRSH 62
T+ + E GS L + V D G YSCE + + A Y+ + KP+P
Sbjct: 498 TSNDKYHEIEGS---LKVLDVQMEDMGIYSCEVSTTLDSDTASGYITVQDKPDP------ 548
Query: 63 PQG-----RLPNSYNITWM--VSSYTPLEEFKIKYRKIPGNEPSPMSNQLTGTNQYQNRR 115
PQ ++ S I+WM V + +P+ E+ I+ + G P Q+Q R
Sbjct: 549 PQSLKLSEKMERSVTISWMPSVENNSPVTEYVIEMNE--GETPD--------EGQWQKYR 598
Query: 116 LVRKRFD 122
V + D
Sbjct: 599 SVSQDID 605
>sp|O15394|NCAM2_HUMAN Neural cell adhesion molecule 2 OS=Homo sapiens GN=NCAM2 PE=1 SV=2
Length = 837
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELSGKPN 55
+E E+ I+ +GS L +R ++ SD G Y C ATN G+ +A+L++ +P+
Sbjct: 251 IEENEKYIL--KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPH 303
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 11 METRGSR--HTLMIRKVVASDFGNYSCEATNPMGKHR--AYLELSGKP 54
+E +G +L I+ V SD G Y CEA + +G H+ YL++ P
Sbjct: 354 IEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAP 401
>sp|Q8WX93|PALLD_HUMAN Palladin OS=Homo sapiens GN=PALLD PE=1 SV=3
Length = 1383
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
T + +I G HTL+I + D G Y+C ATNP G E+
Sbjct: 314 TPDIQIHCEGGDLHTLIIAEAFEDDTGRYTCLATNPSGSDTTSAEV 359
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
H+L+I V + D G Y+C ATN G++ LEL
Sbjct: 1191 HSLIIEPVTSRDAGIYTCIATNRAGQNSFSLEL 1223
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42
R M + G R TL+IR V +D G Y+CEA N G
Sbjct: 452 RVTMTSEGGRGTLIIRDVKEADQGAYTCEAMNSRG 486
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 13/81 (16%)
Query: 12 ETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSY 71
++R + LM+ V D G Y C ATN GK +A+ L P+ +P
Sbjct: 2939 DSRLENNMLMLPSVRPEDAGTYVCTATNRQGKVKAFAYL----------QVPERVIP--- 2985
Query: 72 NITWMVSSYTPLEEFKIKYRK 92
T S+ PL K YRK
Sbjct: 2986 YFTQTPYSFLPLPTIKDAYRK 3006
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSGKPNPAIFRSHPQGRLPNSYNITW 75
+TL+I +V D G Y C ATN G A L + P I H + N +
Sbjct: 2582 NTLVIPRVAQQDSGQYICNATNSAGHTEATVVLHVESPPYATIIPEHTSAQPGNLVQLQC 2641
Query: 76 MVSSYTPL 83
+ PL
Sbjct: 2642 LAHGTPPL 2649
>sp|Q9ET54|PALLD_MOUSE Palladin OS=Mus musculus GN=Palld PE=1 SV=2
Length = 1408
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 9 RIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
+I G HTL+I + D G Y+C ATNP G E+
Sbjct: 325 QIHCESGELHTLVIAEAFEDDTGRYTCLATNPSGSDSTSAEV 366
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
H+L+I V + D G Y+C ATN G++ LEL
Sbjct: 1216 HSLIIEPVTSRDAGIYTCIATNRAGQNSFNLEL 1248
>sp|Q98919|LSAMP_CHICK Limbic system-associated membrane protein OS=Gallus gallus PE=2
SV=1
Length = 338
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 11 METRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
+++ GS+ LM+ V +GNY+C A N +G A L L
Sbjct: 266 IKSTGSQSLLMVANVTEEHYGNYTCVAANKLGVTNASLYL 305
>sp|Q62845|CNTN4_RAT Contactin-4 OS=Rattus norvegicus GN=Cntn4 PE=1 SV=1
Length = 1026
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 20 LMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFR 60
L I KV +D GNY+C TN + H+ G P P I R
Sbjct: 179 LYIAKVEKADVGNYTCVVTNTVTSHQVL----GPPTPLILR 215
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42
R + + G R TL+IR V SD G Y+CEA N G
Sbjct: 452 RVTVTSEGGRGTLIIRDVKESDQGAYTCEAMNARG 486
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 13/81 (16%)
Query: 12 ETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSY 71
++R + LM+ V D G Y C ATN GK +A+ L P+ +P
Sbjct: 3618 DSRLENNMLMLPSVRPQDAGTYVCTATNRQGKVKAFAHL----------QVPERVVP--- 3664
Query: 72 NITWMVSSYTPLEEFKIKYRK 92
T S+ PL K YRK
Sbjct: 3665 YFTQTPYSFLPLPTIKDAYRK 3685
Score = 29.6 bits (65), Expect = 7.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNP 56
TL+I +V D G Y C AT+P G A + L + P
Sbjct: 3262 TLIIPRVAQQDSGQYICNATSPAGHAEATIILHVESPP 3299
>sp|Q23551|UNC22_CAEEL Twitchin OS=Caenorhabditis elegans GN=unc-22 PE=1 SV=3
Length = 7158
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRS 61
L T + + +G + L+I + + D Y+C ATN G L K P +F
Sbjct: 5962 ELVDTSKYTLINKGDKQVLIINDLTSDDADEYTCRATNSSGTRSTRANLRIKTKPRVF-- 6019
Query: 62 HPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE 97
+P Y+ + + E KI Y+ P E
Sbjct: 6020 -----IPPKYHGGYEAQKGETI-ELKIPYKAYPQGE 6049
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRS 61
L + R E + I++V D G Y+ E +NP G A L + P I +
Sbjct: 5572 ELPESSRYRFEASDGVYKFTIKEVWDIDAGEYTVEVSNPYGSDTATANLVVQAPPVIEKD 5631
Query: 62 HPQGRLPN 69
P LP+
Sbjct: 5632 VPNTILPS 5639
>sp|Q4VA61|DSCL1_MOUSE Down syndrome cell adhesion molecule-like protein 1 homolog OS=Mus
musculus GN=Dscaml1 PE=1 SV=2
Length = 2053
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP 63
+L+IR V+ D G Y C+A+N +G + PA+ SHP
Sbjct: 751 SLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAMITSHP 795
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRL 67
R++ T G TL++R V A D G Y+C ATN G + L + P R
Sbjct: 1339 HRLIHTNG---TLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTS 1395
Query: 68 PNSYNITWM 76
+S +TW+
Sbjct: 1396 ASSITLTWI 1404
>sp|P11799|MYLK_CHICK Myosin light chain kinase, smooth muscle OS=Gallus gallus PE=1 SV=2
Length = 1906
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
++ TE E +G+ ++L I++V D G Y+CEA N +G+ + L+
Sbjct: 677 IQETEDFHFEKKGNEYSLYIQEVFPEDTGKYTCEAWNELGETQTQATLT 725
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 9 RIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43
+I E G+ H L ++K D G+YSC A NP G+
Sbjct: 476 QIYEEDGT-HCLWLKKACLGDSGSYSCAAFNPRGQ 509
>sp|P22063|CNTN2_RAT Contactin-2 OS=Rattus norvegicus GN=Cntn2 PE=1 SV=1
Length = 1040
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 20 LMIRKVVASDFGNYSCEATNPMG-------KHRAYLELSGKPNPAIFRSHPQGRL-PNSY 71
L I + ASD GNYSC AT+ M A L L+ + +P +F + R P +Y
Sbjct: 194 LYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAE-DPRLFAPSIKARFPPETY 252
Query: 72 NITWMVSSYTPLEEF-------KIKYRKIPGN 96
+V LE F +IK+RK+ G+
Sbjct: 253 A---LVGQQVTLECFAFGNPVPRIKWRKVDGS 281
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 13 TRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43
T S TL+IR + SD G Y+C A N MGK
Sbjct: 468 TVTSDGTLIIRNISRSDEGKYTCFAENFMGK 498
>sp|Q8TD84|DSCL1_HUMAN Down syndrome cell adhesion molecule-like protein 1 OS=Homo sapiens
GN=DSCAML1 PE=1 SV=2
Length = 2053
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP 63
+L+IR V+ D G Y C+A+N +G + PA+ SHP
Sbjct: 751 SLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHP 795
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRL 67
R++ T G TL++R V A D G Y+C ATN G + L + P R
Sbjct: 1339 HRLIHTNG---TLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTS 1395
Query: 68 PNSYNITWM 76
+S +TW+
Sbjct: 1396 ASSITLTWI 1404
>sp|Q6UXZ4|UNC5D_HUMAN Netrin receptor UNC5D OS=Homo sapiens GN=UNC5D PE=2 SV=1
Length = 953
Score = 33.9 bits (76), Expect = 0.36, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46
+++ + ++TR H L+IR+ SD GNY+C A N + K R+
Sbjct: 200 IDSEQDENIDTRAD-HNLIIRQARLSDSGNYTCMAANIVAKRRS 242
>sp|Q9NR99|MXRA5_HUMAN Matrix-remodeling-associated protein 5 OS=Homo sapiens GN=MXRA5 PE=2
SV=3
Length = 2828
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK-PNPAIFRSHPQ 64
TL+IRKV D G Y C A+N G R + LS P I SH Q
Sbjct: 1912 TLVIRKVQVQDRGQYMCTASNLHGLDRMVVLLSVTVQQPQILASHYQ 1958
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYL---------ELSGKPNP 56
TL+I+K SD GNY+C N G+ R + +++G PNP
Sbjct: 2402 TLLIQKAQRSDSGNYTCLVRNSAGEDRKTVWIHVNVQPPKINGNPNP 2448
>sp|Q7Z3B1|NEGR1_HUMAN Neuronal growth regulator 1 OS=Homo sapiens GN=NEGR1 PE=1 SV=3
Length = 354
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 10 IMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
I++ +R L + V FGNY+C A N +G A L L
Sbjct: 272 IIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPL 312
>sp|Q9Z0J8|NEGR1_RAT Neuronal growth regulator 1 OS=Rattus norvegicus GN=Negr1 PE=1 SV=1
Length = 348
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 10 IMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
I++ +R L + V FGNY+C A N +G A L L
Sbjct: 266 IIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPL 306
>sp|Q5R412|NEGR1_PONAB Neuronal growth regulator 1 OS=Pongo abelii GN=NEGR1 PE=2 SV=1
Length = 354
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 10 IMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
I++ +R L + V FGNY+C A N +G A L L
Sbjct: 272 IIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPL 312
>sp|Q80Z24|NEGR1_MOUSE Neuronal growth regulator 1 OS=Mus musculus GN=Negr1 PE=1 SV=1
Length = 348
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 10 IMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
I++ +R L + V FGNY+C A N +G A L L
Sbjct: 266 IIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPL 306
>sp|P07333|CSF1R_HUMAN Macrophage colony-stimulating factor 1 receptor OS=Homo sapiens
GN=CSF1R PE=1 SV=2
Length = 972
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 16/106 (15%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKH----------RAYLELSGKPNPAIFRSHPQGRLP 68
TL + +V GNYSC A+N GKH AYL LS + N + +G
Sbjct: 262 TLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAYLNLSSEQNLIQEVTVGEG--- 318
Query: 69 NSYNITWMVSSYTPLEEFKIKYR-KIPGNEPSPMSNQLTGTNQYQN 113
N+ MV +Y L+ F Y ++P P T + Y++
Sbjct: 319 --LNLKVMVEAYPGLQGFNWTYLGPFSDHQPEPKLANATTKDTYRH 362
>sp|Q8K1S2|UNC5D_MOUSE Netrin receptor UNC5D OS=Mus musculus GN=Unc5d PE=2 SV=1
Length = 956
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46
+++ + ++TR H L+IR+ SD GNY+C A N + K R+
Sbjct: 198 IDSEQDENIDTRAD-HNLIIRQARLSDSGNYTCMAANIVAKRRS 240
>sp|Q5DTJ9|MYPN_MOUSE Myopalladin OS=Mus musculus GN=Mypn PE=2 SV=2
Length = 1315
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
H+L+I + D G Y+C ATN G++ LEL+
Sbjct: 1124 HSLLIDPLTQRDAGTYTCVATNKTGQNSFSLELT 1157
>sp|Q86TC9|MYPN_HUMAN Myopalladin OS=Homo sapiens GN=MYPN PE=1 SV=2
Length = 1320
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
H+L+I + D G Y C ATN G++ LELS
Sbjct: 1129 HSLLIDPLTQRDAGTYKCIATNKTGQNSFSLELS 1162
>sp|Q6PDN3|MYLK_MOUSE Myosin light chain kinase, smooth muscle OS=Mus musculus GN=Mylk
PE=1 SV=3
Length = 1941
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR 45
++ +E E +G H+L I++V D G Y+CEA N G+ R
Sbjct: 651 IQESEDFHFEQKGGWHSLCIQEVFPEDTGTYTCEAWNSAGEVR 693
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP 63
+L+I V D G Y+CEA+N G + +EL+ + N R P
Sbjct: 90 SLVIHTVREEDKGKYTCEASNGSGARQVTVELTVEGNSMKKRDQP 134
Score = 30.4 bits (67), Expect = 4.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43
L+TT+ ++ GSR ++ I K + D G Y C A N G+
Sbjct: 1160 LKTTKFIVLAQEGSRFSVSIEKALPEDRGLYKCVAKNSAGQ 1200
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51
L+ + R M + L IR V D G Y+C N GK ELS
Sbjct: 196 LQPSARVSMSEKNGMQILEIRGVTRDDLGVYTCMVVNGSGKASMSAELS 244
>sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2
Length = 5635
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAI 58
TER + GS TL I + SD G Y+C ATNP G+ L+ P I
Sbjct: 3292 TERIRVSANGS--TLNIYGALTSDTGKYTCVATNPAGEEDRIFNLNVYVTPTI 3342
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 ETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAI 58
++ E RI+ + GS+ L I + SD GNY+C A+N GK + Y LS + P++
Sbjct: 3196 DSLEVRIL-SGGSK--LQIARSQHSDSGNYTCIASNMEGKAQKYYFLSIQVPPSV 3247
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 11 METRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAI 58
++ + S L I K + D G Y+C ATN G+ + +++L P++
Sbjct: 1874 LKIQSSGRVLQIAKTLLEDAGRYTCVATNAAGETQQHIQLHVHEPPSL 1921
Score = 29.3 bits (64), Expect = 9.1, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSH 62
++ TE ++T + L + + D G YSC+A N G + Y + P I ++
Sbjct: 1399 VQVTESSTIQTVNNGKILKLFRATPEDAGRYSCKAINIAGTSQKYFNIDVLVPPTIIGTN 1458
Query: 63 PQGRLPNSYNI 73
PN ++
Sbjct: 1459 ----FPNEVSV 1465
Score = 29.3 bits (64), Expect = 9.7, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSH 62
H L ++ + SD G Y C A N G +LS P+I +H
Sbjct: 2346 HILQLKNIHVSDTGRYVCVAVNVAGMTDKKYDLSVHAPPSIIGNH 2390
>sp|Q6UXM1|LRIG3_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 3
OS=Homo sapiens GN=LRIG3 PE=2 SV=1
Length = 1119
Score = 33.5 bits (75), Expect = 0.50, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSH 62
L TER L+I SD G Y+CE +N +G R + LS P P
Sbjct: 737 LVVTERHFFA--AGNQLLIIVDSDVSDAGKYTCEMSNTLGTERGNVRLSVIPTPTC--DS 792
Query: 63 PQGRLPNSYNITW 75
PQ P+ + W
Sbjct: 793 PQMTAPSLDDDGW 805
>sp|Q08156|KIT_CHICK Mast/stem cell growth factor receptor Kit OS=Gallus gallus GN=KIT
PE=2 SV=1
Length = 960
Score = 33.5 bits (75), Expect = 0.50, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50
TL IR V +D G ++C+A NP GK A + L
Sbjct: 260 TLNIRSVGVNDSGEFTCQAENPFGKTNATVTL 291
>sp|Q96MS0|ROBO3_HUMAN Roundabout homolog 3 OS=Homo sapiens GN=ROBO3 PE=1 SV=2
Length = 1386
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRL 67
S H+L I V A D G Y+C A N +G+ A LS P + + PQ ++
Sbjct: 307 SDHSLWIGHVSAEDEGTYTCVAENSVGRAEASGSLSVHVPPQLV-TQPQDQM 357
>sp|Q61330|CNTN2_MOUSE Contactin-2 OS=Mus musculus GN=Cntn2 PE=2 SV=2
Length = 1040
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 20 LMIRKVVASDFGNYSCEATNPMG-------KHRAYLELSGKPNPAIFRSHPQGRL-PNSY 71
L I + ASD GNYSC AT+ + A L L+ + +P +F + R P +Y
Sbjct: 194 LYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQLNLAAE-DPRLFAPSIKARFPPETY 252
Query: 72 NITWMVSSYTPLEEF-------KIKYRKIPGN 96
+V LE F +IK+RK+ G+
Sbjct: 253 A---LVGQQVTLECFAFGNPVPRIKWRKVDGS 281
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 19 TLMIRKVVASDFGNYSCEATNPMGK 43
TL+IR + SD G Y+C A N MGK
Sbjct: 474 TLIIRNISRSDEGKYTCFAENFMGK 498
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,909,377
Number of Sequences: 539616
Number of extensions: 2513358
Number of successful extensions: 5944
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 5165
Number of HSP's gapped (non-prelim): 842
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)