Query psy15979
Match_columns 152
No_of_seqs 164 out of 1479
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 17:54:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15979.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15979hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mtr_A N-CAM-1, NCAM-1, neural 99.8 2.1E-18 7.2E-23 126.9 16.3 131 7-139 65-214 (215)
2 2nzi_A Titin; IG-domain, FNIII 99.7 5.1E-16 1.8E-20 118.8 16.8 128 2-130 144-286 (305)
3 2jll_A NCAM2, neural cell adhe 99.6 9.9E-15 3.4E-19 115.1 16.9 125 7-132 147-286 (389)
4 2v5y_A Receptor-type tyrosine- 99.4 4.8E-13 1.7E-17 114.8 11.2 115 17-132 222-352 (731)
5 2jll_A NCAM2, neural cell adhe 99.4 9.3E-13 3.2E-17 103.8 10.6 113 15-129 249-380 (389)
6 2d9q_B Granulocyte colony-stim 99.4 3.5E-12 1.2E-16 99.0 10.4 110 18-127 61-191 (313)
7 1i1r_A GP130, interleukin-6 re 99.3 1.7E-11 5.9E-16 94.5 12.3 116 8-127 56-188 (303)
8 2kbg_A N-CAM 2, neural cell ad 99.3 1E-11 3.4E-16 84.5 8.0 76 52-129 7-95 (114)
9 4fa8_A Secreted protein BARF1; 99.3 1.5E-11 5E-16 90.8 9.2 115 7-125 58-193 (203)
10 3b43_A Titin; I-SET IG fold, e 99.2 7.5E-11 2.6E-15 98.4 11.6 124 2-129 424-565 (570)
11 2r15_A Myomesin-1; sarcomeric 99.2 2E-10 6.8E-15 83.0 11.4 120 2-125 43-201 (212)
12 3knb_B Obscurin-like protein 1 99.2 1.4E-11 4.8E-16 82.2 4.8 51 2-52 53-103 (107)
13 2v44_A NCAM2, neural cell adhe 99.2 3E-10 1E-14 80.8 11.2 120 2-124 42-177 (189)
14 3jz7_A MCAR, CAR, coxsackievir 99.2 5.2E-10 1.8E-14 80.5 12.5 118 6-126 69-204 (214)
15 1oww_A FN, fibronectin first t 99.2 1.6E-10 5.3E-15 74.8 8.5 76 52-128 4-91 (98)
16 2cqv_A MLCK, myosin light chai 99.2 1.3E-10 4.4E-15 77.4 8.1 57 2-58 47-105 (114)
17 2c5d_C AXL oncogene, tyrosine- 99.1 4.7E-10 1.6E-14 80.4 10.3 103 17-125 67-183 (195)
18 3rbs_A Myomesin-1; immunoglobu 99.1 9.7E-10 3.3E-14 80.9 12.1 121 2-127 43-200 (207)
19 3p2t_A Leukocyte immunoglobuli 99.1 2.6E-10 8.9E-15 82.3 8.4 113 15-132 55-192 (196)
20 2vkw_A Neural cell adhesion mo 99.1 5E-10 1.7E-14 81.6 9.8 117 19-136 69-203 (209)
21 1f97_A Junction adhesion molec 99.1 1.1E-09 3.6E-14 78.8 11.3 119 6-132 57-203 (212)
22 3lcy_A Titin; A-BAND, IG tande 99.1 3.2E-10 1.1E-14 80.7 8.3 120 2-125 47-187 (197)
23 3knb_A Titin; IG-like, titin, 99.1 1.5E-10 5.1E-15 76.2 5.8 47 6-52 51-97 (100)
24 1v5j_A KIAA1355 protein, RSGI 99.1 2.6E-10 8.7E-15 76.7 6.8 66 68-134 20-99 (108)
25 1n26_A IL-6 receptor alpha cha 99.1 3.4E-09 1.2E-13 82.7 14.2 112 17-128 154-286 (325)
26 2yd6_A PTPRD protein; hydrolas 99.1 2.2E-09 7.4E-14 78.2 12.1 117 14-134 59-203 (212)
27 1e07_A Carcinoembryonic antige 99.1 1.1E-09 3.6E-14 92.1 11.8 124 2-132 506-638 (642)
28 2a38_A Titin; Z1Z2, structural 99.1 1.8E-09 6E-14 76.9 11.3 114 8-125 53-186 (194)
29 2ibg_A CG9211-PA, GH03927P; IH 99.1 8.6E-09 2.9E-13 75.0 15.1 118 17-135 69-211 (214)
30 1vca_A VCAM-D1,2, human vascul 99.1 1.7E-09 5.9E-14 79.0 11.3 109 14-125 50-181 (202)
31 2yuz_A Myosin-binding protein 99.1 2.2E-10 7.5E-15 75.3 5.9 54 2-55 45-98 (100)
32 1hng_A CD2; T lymphocyte adhes 99.1 6E-10 2E-14 79.8 8.5 109 5-126 51-168 (176)
33 3b43_A Titin; I-SET IG fold, e 99.0 8.3E-10 2.8E-14 92.1 10.1 123 2-128 331-470 (570)
34 4f80_A Butyrophilin subfamily 99.0 1.1E-10 3.9E-15 85.8 4.3 110 16-128 81-207 (226)
35 2db8_A Tripartite motif protei 99.0 8.4E-10 2.9E-14 73.6 7.9 70 66-135 22-102 (110)
36 2rik_A Titin; I-SET IG fold, p 99.0 2.3E-09 7.8E-14 80.8 10.9 121 3-127 140-277 (284)
37 2d3v_A Leukocyte immunoglobuli 99.0 4.3E-09 1.5E-13 75.9 11.8 112 15-131 55-192 (196)
38 2y25_A Myomesin; structural pr 99.0 7.7E-09 2.6E-13 78.8 13.7 120 2-125 148-306 (317)
39 1rhf_A Tyrosine-protein kinase 99.0 1.9E-09 6.6E-14 76.2 9.7 118 3-125 43-173 (182)
40 2yd1_A Tyrosine-protein phosph 99.0 2.7E-09 9.3E-14 77.5 10.7 119 5-127 50-192 (212)
41 2rik_A Titin; I-SET IG fold, p 99.0 5.4E-09 1.9E-13 78.7 12.5 120 2-125 45-182 (284)
42 2ic2_A CG9211-PA, GH03927P; IH 99.0 1.2E-09 4.2E-14 73.7 8.0 73 52-128 4-101 (115)
43 3bp6_B Programmed cell death 1 99.0 6.7E-10 2.3E-14 80.1 6.7 118 5-127 51-186 (202)
44 2if7_A SLAM family member 6; N 99.0 2.2E-09 7.4E-14 77.8 9.4 111 7-124 62-182 (193)
45 1nbq_A JAM, junctional adhesio 99.0 1.6E-09 5.4E-14 77.8 8.5 118 6-131 60-204 (209)
46 2gi7_A GPVI protein; IG-like d 99.0 6.4E-09 2.2E-13 74.4 11.7 110 16-130 50-179 (184)
47 1i1r_A GP130, interleukin-6 re 99.0 7.7E-09 2.6E-13 79.6 12.8 111 18-128 158-290 (303)
48 2va4_A NCAM2, N-CAM 2, neural 99.0 2.3E-09 7.7E-14 76.1 9.0 116 3-124 45-183 (192)
49 2crz_A Fibronectin type-III do 99.0 1.6E-09 5.5E-14 71.8 7.7 69 66-134 21-101 (110)
50 1gxe_A Myosin binding protein 99.0 1.1E-09 3.8E-14 76.5 6.8 48 5-52 90-137 (139)
51 1e07_A Carcinoembryonic antige 99.0 1.1E-08 3.6E-13 86.0 13.9 122 2-130 328-458 (642)
52 1oll_A NK receptor; immune sys 99.0 1E-08 3.5E-13 73.6 11.9 113 15-132 54-184 (188)
53 1n26_A IL-6 receptor alpha cha 99.0 4.3E-09 1.5E-13 82.1 10.5 106 17-126 59-184 (325)
54 2yux_A Myosin-binding protein 99.0 3.9E-10 1.3E-14 76.1 3.9 92 41-133 3-110 (120)
55 2dju_A Receptor-type tyrosine- 99.0 6.5E-09 2.2E-13 67.8 9.7 83 51-134 5-97 (106)
56 2v5m_A Dscam; neurobiology SPL 99.0 3.2E-09 1.1E-13 83.3 9.7 105 18-126 270-381 (388)
57 4go6_B HCF C-terminal chain 1; 99.0 4.5E-09 1.5E-13 78.8 9.9 111 16-128 44-193 (232)
58 2ocw_A Polymeric-immunoglobuli 99.0 4.6E-09 1.6E-13 87.1 10.8 118 6-127 392-538 (585)
59 1nct_A Titin; cell adhesion, g 99.0 1E-09 3.5E-14 72.5 5.6 52 2-53 54-105 (106)
60 1ugn_A LIR1, leukocyte immunog 99.0 5.1E-09 1.7E-13 75.5 9.8 112 16-132 56-194 (198)
61 1x44_A Myosin-binding protein 99.0 1.5E-09 5E-14 71.0 6.3 54 2-57 46-101 (103)
62 2ed9_A Netrin receptor DCC; tu 98.9 5.5E-10 1.9E-14 75.3 4.2 101 33-134 2-121 (124)
63 1hnf_A CD2; T lymphocyte adhes 98.9 2.9E-09 1E-13 77.2 8.4 110 5-126 56-173 (182)
64 1f3r_B FV antibody fragment; I 98.9 3.4E-08 1.2E-12 74.2 14.4 85 6-92 64-176 (257)
65 2edf_A Obscurin; beta-sandwich 98.9 1.9E-09 6.4E-14 70.3 6.5 54 2-57 47-100 (103)
66 3r4d_A CEA-related cell adhesi 98.9 1.5E-08 5.1E-13 72.9 12.0 114 7-127 63-192 (208)
67 3qp3_A Titin; I-SET IG-like, s 98.9 1.6E-09 5.6E-14 70.4 6.2 50 2-51 48-97 (103)
68 2haz_A N-CAM 1, neural cell ad 98.9 6.8E-09 2.3E-13 68.4 9.2 65 70-134 21-102 (105)
69 3uto_A Twitchin; kinase, muscl 98.9 2.9E-09 9.8E-14 90.0 9.2 77 53-130 9-97 (573)
70 2zg1_A Sialic acid-binding IG- 98.9 8.5E-09 2.9E-13 74.6 10.5 116 6-124 68-203 (214)
71 1bqu_A Protein (GP130); cytoki 98.9 1.6E-08 5.5E-13 73.8 11.9 110 18-127 62-193 (215)
72 2bk8_A Connectin, M1, titin he 98.9 2.6E-09 8.8E-14 68.9 6.7 51 2-52 42-92 (97)
73 3mj8_L Stimulatory hamster ant 98.9 1.2E-08 4.1E-13 73.9 10.9 84 5-88 57-150 (213)
74 1he7_A High affinity nerve gro 98.9 2E-09 6.9E-14 74.3 6.4 51 2-52 40-97 (126)
75 2fbo_J V1V2;, variable region- 98.9 6.2E-09 2.1E-13 76.8 9.5 81 7-89 80-171 (250)
76 3puc_A Titin; I-SET IG-like do 98.9 2.6E-09 9E-14 68.7 6.5 50 2-51 46-95 (99)
77 1epf_A NCAM, protein (neural c 98.9 1E-08 3.6E-13 72.8 10.1 116 5-124 48-181 (191)
78 1wwb_X Protein (brain derived 98.9 2.3E-09 8E-14 70.5 6.1 37 17-53 61-97 (103)
79 2e3v_A Neural cell adhesion mo 98.9 1.1E-08 3.9E-13 69.2 9.7 69 70-138 22-107 (122)
80 3p4l_A Neogenin; iron homeosta 98.9 8.3E-09 2.8E-13 75.2 9.6 120 17-136 63-204 (211)
81 3b83_A Ten-D3; beta sheet, com 98.9 8E-09 2.7E-13 67.7 8.5 71 66-137 13-94 (100)
82 3irg_B Obscurin-like protein 1 98.9 1.4E-09 4.9E-14 71.0 4.8 51 2-52 53-103 (107)
83 3kld_A Contactin 4, axcam, BIG 98.9 1.4E-09 4.8E-14 86.3 5.5 109 16-128 256-377 (384)
84 1uey_A KIAA0343 protein; immun 98.9 6.1E-09 2.1E-13 70.6 8.0 81 48-129 11-105 (127)
85 1moe_A Anti-CEA MAB T84.66; an 98.9 2.6E-08 8.7E-13 73.5 12.1 87 6-92 63-158 (240)
86 1waa_A Titin; metal binding pr 98.9 9E-10 3.1E-14 71.5 3.6 42 2-43 44-85 (93)
87 2wim_A N-CAM 2, NCAM2, neural 98.9 1.3E-08 4.5E-13 76.7 10.6 119 2-123 44-178 (291)
88 3u83_A Poliovirus receptor-rel 98.9 5.4E-09 1.9E-13 80.4 8.6 121 18-143 194-327 (331)
89 3lpw_A A77-A78 domain from tit 98.9 2.1E-08 7.1E-13 71.5 11.1 113 16-129 60-189 (197)
90 2e6p_A Obscurin-like protein 1 98.9 2E-09 7E-14 70.2 5.3 54 2-57 49-102 (104)
91 1ccz_A Protein (CD58); LFA-3, 98.9 4.2E-09 1.4E-13 75.3 7.1 108 7-126 51-163 (171)
92 2znx_A SCFV; fluorotryptohpan, 98.9 2.5E-08 8.6E-13 74.3 11.6 87 6-92 59-161 (242)
93 2dm2_A Palladin; beta-sandwich 98.9 5.7E-09 1.9E-13 68.7 7.0 52 6-57 53-107 (110)
94 2crm_A Fibronectin type-III do 98.9 7.4E-09 2.5E-13 69.5 7.6 69 67-135 31-112 (120)
95 2ec8_A MAST/stem cell growth f 98.9 5.2E-09 1.8E-13 85.8 8.2 110 16-132 373-508 (524)
96 2edy_A Receptor-type tyrosine- 98.9 1.8E-08 6.1E-13 65.4 9.2 82 53-135 8-101 (103)
97 2lu7_A Obscurin-like protein 1 98.9 2E-09 6.7E-14 68.8 4.5 42 2-43 35-76 (84)
98 2gee_A Hypothetical protein; f 98.9 5.3E-08 1.8E-12 70.9 12.7 112 15-128 74-198 (203)
99 2e7c_A Myosin-binding protein 98.9 3.3E-09 1.1E-13 70.9 5.7 47 6-52 67-113 (118)
100 3vh8_G Killer cell immunoglobu 98.9 2.3E-08 7.7E-13 76.9 11.2 114 16-134 172-311 (316)
101 2lvc_A Obscurin-like protein 1 98.9 9.4E-10 3.2E-14 71.4 2.8 43 1-43 44-86 (91)
102 3ojm_B Fibroblast growth facto 98.9 1.6E-08 5.4E-13 73.5 9.7 114 16-132 74-219 (231)
103 1bpv_A Titin, A71, connectin; 98.9 5E-09 1.7E-13 70.4 6.5 64 66-129 22-100 (112)
104 2d9q_B Granulocyte colony-stim 98.9 6.5E-08 2.2E-12 74.7 13.7 117 24-140 168-312 (313)
105 3esu_F Antibody 14B7* light ch 98.9 4.3E-08 1.5E-12 72.8 12.2 87 6-92 62-170 (250)
106 1uct_A Immunoglobulin alpha FC 98.9 7.3E-08 2.5E-12 71.2 13.3 112 19-134 65-196 (218)
107 1dr9_A B7-1 (CD80), T lymphocy 98.8 2.7E-08 9.2E-13 71.5 10.4 71 16-88 63-141 (201)
108 1f2q_A High affinity immunoglo 98.8 6.6E-09 2.3E-13 73.6 6.9 102 16-122 49-158 (176)
109 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.8 2.8E-08 9.5E-13 74.6 10.7 37 6-42 62-100 (256)
110 1x5y_A Myosin binding protein 98.8 3E-08 1E-12 65.6 9.7 78 52-130 7-98 (111)
111 1x5x_A Fibronectin type-III do 98.8 9.2E-09 3.1E-13 67.9 7.0 69 66-134 19-100 (109)
112 3sbw_C Programmed cell death 1 98.8 3.4E-08 1.2E-12 71.7 10.6 116 7-127 66-204 (222)
113 3ux9_B SCFV antibody; five hel 98.8 1.1E-07 3.7E-12 71.0 13.7 87 6-92 62-173 (256)
114 1qr4_A Protein (tenascin); fib 98.8 1.6E-07 5.6E-12 66.9 14.1 113 15-129 55-178 (186)
115 1wf5_A Sidekick 2 protein; FNI 98.8 5E-09 1.7E-13 70.1 5.7 90 41-130 3-108 (121)
116 3d9a_L Light chain of hyhel10 98.8 3.2E-08 1.1E-12 71.6 10.4 74 7-80 60-139 (213)
117 1wis_A KIAA1514 protein; FNIII 98.8 1.4E-08 4.8E-13 68.8 7.9 78 52-130 16-111 (124)
118 1wwc_A Protein (NT-3 growth fa 98.8 5.7E-09 2E-13 69.8 5.8 52 3-54 46-101 (118)
119 3irg_A Titin; IG-like, titin, 98.8 6.1E-09 2.1E-13 66.8 5.8 47 5-51 50-96 (100)
120 3grw_A Fibroblast growth facto 98.8 1E-07 3.5E-12 69.9 13.1 74 16-90 70-150 (241)
121 2j8h_A Titin, connectin; cardi 98.8 1.9E-08 6.4E-13 71.7 8.7 115 6-124 49-187 (197)
122 2ed8_A Netrin receptor DCC; tu 98.8 2.6E-08 9E-13 65.2 8.7 82 52-134 6-97 (106)
123 3auv_A SC-DSFV derived from th 98.8 5.9E-08 2E-12 73.7 11.8 87 6-92 70-173 (276)
124 1g1c_A Immunoglobulin-like dom 98.8 1E-08 3.4E-13 66.0 6.4 49 3-51 46-95 (99)
125 2yuw_A Myosin binding protein 98.8 2.5E-08 8.6E-13 65.8 8.6 78 52-130 6-97 (110)
126 1svz_A Immunoglobulin;, single 98.8 7.3E-08 2.5E-12 71.5 12.0 87 6-92 64-166 (247)
127 2nzi_A Titin; IG-domain, FNIII 98.8 4E-08 1.4E-12 74.6 10.7 120 6-127 49-190 (305)
128 1x4z_A Biregional cell adhesio 98.8 1.9E-08 6.6E-13 67.6 8.0 64 67-130 30-108 (121)
129 2iep_A Muscle-specific kinase 98.8 6.1E-09 2.1E-13 73.9 5.6 112 6-126 52-181 (192)
130 3fl7_A Ephrin receptor; ATP-bi 98.8 5.4E-08 1.9E-12 81.8 12.3 116 17-134 399-531 (536)
131 3ejj_X Macrophage colony-stimu 98.8 9.2E-09 3.1E-13 77.5 6.9 122 3-129 132-276 (289)
132 2dm3_A KIAA0992 protein, palla 98.8 7E-09 2.4E-13 68.1 5.5 56 2-57 49-107 (110)
133 2ghw_B Anti-SARS SCFV antibody 98.8 1E-07 3.5E-12 70.6 12.6 85 6-92 67-172 (247)
134 1x5z_A Receptor-type tyrosine- 98.8 2E-08 6.8E-13 66.5 7.8 82 52-134 16-106 (115)
135 1x5l_A Ephrin type-A receptor 98.8 4.1E-08 1.4E-12 64.6 9.2 83 52-135 9-103 (111)
136 3k0w_A Mucosa-associated lymph 98.8 2.7E-08 9.3E-13 72.8 9.1 106 16-125 63-192 (218)
137 2o26_X MAST/stem cell growth f 98.8 2.8E-08 9.5E-13 75.2 9.4 118 2-124 132-278 (290)
138 1nqb_A Single-chain antibody f 98.8 2.9E-08 1E-12 74.8 9.5 77 6-82 65-150 (256)
139 2eny_A Obscurin; beta-sandwich 98.8 6.1E-09 2.1E-13 68.6 5.0 52 2-55 49-100 (104)
140 1x4x_A Fibronectin type-III do 98.8 1.9E-08 6.4E-13 66.3 7.4 68 67-134 20-97 (106)
141 2y23_A Myomesin; structural pr 98.8 1.1E-07 3.9E-12 72.1 12.8 86 2-88 42-142 (312)
142 3rjd_A High affinity immunoglo 98.8 9.3E-08 3.2E-12 70.8 12.0 106 17-124 130-249 (262)
143 1u2h_A APEG-1, aortic preferen 98.8 9.3E-09 3.2E-13 66.2 5.6 45 7-51 51-95 (99)
144 2dn7_A Receptor-type tyrosine- 98.8 2.1E-08 7.3E-13 65.6 7.5 77 52-130 6-94 (107)
145 2kkq_A Myotilin; unknown funct 98.8 1.6E-08 5.3E-13 67.8 6.9 51 6-56 60-113 (116)
146 2yd9_A Receptor-type tyrosine- 98.8 2.7E-08 9.2E-13 75.9 9.0 107 17-127 163-284 (304)
147 2wv3_A Neuroplastin; igcam, me 98.8 1.7E-07 6E-12 66.6 12.8 106 16-125 54-181 (190)
148 2c1o_A IGK-C protein; FAB frag 98.8 5.8E-08 2E-12 72.3 10.7 75 6-80 101-181 (254)
149 1cd9_B G-CSF-R, protein (G-CSF 98.8 2.7E-07 9.4E-12 67.3 14.0 118 17-134 67-211 (215)
150 3eow_R Poliovirus receptor; im 98.8 1.9E-08 6.4E-13 73.5 7.7 125 6-134 61-212 (221)
151 1wit_A Twitchin 18TH IGSF modu 98.8 7.3E-09 2.5E-13 66.3 4.9 42 10-51 50-91 (93)
152 1p6f_A NKP46, natural cytotoxi 98.8 9.8E-08 3.3E-12 71.9 11.7 114 16-134 58-189 (242)
153 2dru_A Chimera of CD48 antigen 98.8 2E-08 6.9E-13 72.2 7.6 107 7-125 60-172 (180)
154 2dm4_A Sortilin-related recept 98.8 4.2E-08 1.4E-12 64.5 8.6 83 52-134 6-99 (108)
155 4fom_A Poliovirus receptor-rel 98.8 2E-08 7E-13 76.6 8.0 120 7-129 62-203 (308)
156 1fnl_A Low affinity immunoglob 98.8 9E-09 3.1E-13 72.9 5.4 103 16-123 52-162 (175)
157 3p3y_A Neurofascin; IG domains 98.8 1.6E-08 5.6E-13 79.5 7.4 106 17-127 274-396 (404)
158 1wfu_A Unnamed protein product 98.8 5.4E-09 1.9E-13 71.4 4.0 70 65-134 26-111 (120)
159 2cr3_A Basic fibroblast growth 98.8 1.9E-08 6.3E-13 65.3 6.4 49 2-54 42-90 (99)
160 1x4y_A Biregional cell adhesio 98.8 1E-07 3.4E-12 63.4 10.2 70 66-135 20-106 (114)
161 3d85_D IL-12B, interleukin-12 98.8 8.2E-08 2.8E-12 75.0 11.3 97 32-128 187-299 (306)
162 3nl4_L Antigen binding fragmen 98.8 3.5E-08 1.2E-12 71.4 8.5 83 6-88 59-149 (213)
163 4fmk_A Poliovirus receptor-rel 98.8 2E-08 6.9E-13 72.1 7.1 111 16-129 81-212 (225)
164 2ec8_A MAST/stem cell growth f 98.7 4.9E-08 1.7E-12 80.0 10.2 107 16-125 271-402 (524)
165 3qs7_E FL cytokine receptor; i 98.7 2.8E-08 9.7E-13 80.5 8.7 106 17-126 102-219 (423)
166 4dkd_C Macrophage colony-stimu 98.7 1.2E-08 4.2E-13 76.9 6.0 118 3-127 132-274 (292)
167 3kvq_A Vascular endothelial gr 98.7 1E-08 3.6E-13 66.9 4.9 48 3-52 51-98 (108)
168 2ede_A Netrin receptor DCC; tu 98.7 1.1E-07 3.8E-12 62.8 10.0 68 67-134 23-105 (114)
169 1bih_A Hemolin; insect immunit 98.7 1.3E-08 4.6E-13 79.8 6.4 107 16-126 268-388 (395)
170 3dmk_A DOWN syndrome cell adhe 98.7 2.1E-08 7.2E-13 86.3 8.1 123 3-130 661-805 (816)
171 2djs_A Ephrin type-B receptor 98.7 2.2E-08 7.5E-13 65.8 6.4 69 67-135 20-100 (108)
172 2x1w_L Vascular endothelial gr 98.7 4E-08 1.4E-12 71.7 8.4 62 18-80 64-132 (213)
173 2ckn_A Basic fibroblast growth 98.7 1.2E-08 4E-13 65.7 4.8 46 2-51 48-93 (95)
174 2p1y_A Bispecific alpha/beta T 98.7 2E-07 7E-12 68.5 12.2 85 6-92 60-164 (238)
175 3o4o_C Interleukin-1 receptor 98.7 3.5E-08 1.2E-12 76.2 8.4 73 7-81 171-257 (339)
176 1x5f_A Neogenin; RGM binding, 98.7 6.7E-08 2.3E-12 64.5 8.7 82 52-134 16-111 (120)
177 2wng_A Tyrosine-protein phosph 98.7 1.1E-07 3.8E-12 73.2 11.2 74 15-88 71-153 (327)
178 2ocw_A Polymeric-immunoglobuli 98.7 1.2E-07 4.2E-12 78.5 12.0 82 6-88 61-147 (585)
179 3qs7_E FL cytokine receptor; i 98.7 9.5E-09 3.2E-13 83.3 5.1 112 17-132 289-412 (423)
180 1qok_A MFE-23 recombinant anti 98.7 1.9E-07 6.4E-12 71.2 11.9 84 6-92 91-198 (282)
181 1itb_B Type 1 interleukin-1 re 98.7 1.1E-07 3.7E-12 72.6 10.7 105 18-126 162-306 (315)
182 1jbj_A CD3 epsilon and gamma e 98.7 3.1E-08 1.1E-12 71.2 7.1 36 16-51 42-78 (186)
183 2edk_A Myosin-binding protein 98.7 4.1E-09 1.4E-13 68.6 2.2 51 2-54 47-101 (101)
184 2ed7_A Netrin receptor DCC; tu 98.7 4E-08 1.4E-12 65.4 7.1 68 67-134 30-110 (119)
185 2dlt_A Myosin binding protein 98.7 1.5E-08 5.1E-13 66.4 4.9 50 2-51 47-96 (106)
186 3rbs_A Myomesin-1; immunoglobu 98.7 5.4E-09 1.9E-13 76.9 3.0 49 3-53 158-206 (207)
187 2dav_A SLOW MYBP-C, myosin-bin 98.7 5.6E-08 1.9E-12 67.0 7.9 54 6-59 57-119 (126)
188 1qgc_4 Protein (immunoglobulin 98.7 8.5E-08 2.9E-12 76.5 10.2 83 6-88 63-152 (438)
189 4hwu_A Fibroblast growth facto 98.7 1.7E-08 5.8E-13 64.8 5.0 49 2-54 39-87 (95)
190 1b6u_A KIR2DL3, P58 killer cel 98.7 6.7E-07 2.3E-11 68.0 14.6 115 16-135 60-200 (257)
191 3oq3_B IFN-alpha/beta binding 98.7 9.1E-08 3.1E-12 74.1 10.0 71 6-81 174-256 (329)
192 2kdg_A Myotilin; immonoglobuli 98.7 3.1E-08 1E-12 63.8 6.1 40 13-52 57-96 (100)
193 1nkr_A P58-CL42 KIR; inhibitor 98.7 3E-07 1E-11 66.4 12.1 114 16-132 61-198 (201)
194 1cfb_A Drosophila neuroglian; 98.7 8.2E-08 2.8E-12 69.5 9.1 81 50-132 2-97 (205)
195 2y23_A Myomesin; structural pr 98.7 1.5E-07 5E-12 71.4 10.8 123 2-127 148-305 (312)
196 2gjj_A A21 single-chain antibo 98.7 4.8E-07 1.6E-11 68.4 13.6 87 6-92 69-177 (264)
197 3n06_B PRL-R, prolactin recept 98.7 3.4E-07 1.2E-11 66.7 12.4 115 19-133 63-201 (210)
198 3n1f_C Cell adhesion molecule- 98.7 1.1E-07 3.9E-12 62.4 8.9 68 67-134 17-101 (102)
199 2edh_A Obscurin; structural ge 98.7 6.8E-08 2.3E-12 63.8 7.8 48 2-53 57-104 (113)
200 1ry7_B FGFR-3, fibroblast grow 98.7 4.3E-08 1.5E-12 75.5 7.8 110 15-128 177-321 (334)
201 2vr9_A Roundabout 1, ROBO; imm 98.7 3.7E-09 1.3E-13 76.7 1.7 110 20-132 71-204 (217)
202 2cpc_A KIAA0657 protein; immun 98.7 2.3E-08 7.9E-13 66.0 5.5 51 2-54 52-102 (113)
203 2ha1_A Fibronectin; beta sandw 98.7 4.5E-07 1.6E-11 65.4 12.8 113 15-128 53-195 (201)
204 4fqp_A Poliovirus receptor; im 98.7 9.6E-08 3.3E-12 73.2 9.4 105 18-126 177-296 (313)
205 3r8q_A Fibronectin; heparin, F 98.7 5.9E-07 2E-11 68.2 13.7 112 14-127 161-284 (290)
206 1wfo_A Sidekick 2; FN3, cell a 98.7 6.3E-09 2.1E-13 70.6 2.2 99 35-134 3-121 (130)
207 1cfb_A Drosophila neuroglian; 98.7 1.3E-07 4.4E-12 68.5 9.4 112 19-132 64-199 (205)
208 2rcj_C Light chain; immunoglob 98.7 3.3E-07 1.1E-11 75.0 12.9 83 6-88 58-150 (523)
209 2xzc_L FAB A.17 light chain; i 98.7 1.3E-07 4.3E-12 68.8 9.3 75 6-80 60-141 (216)
210 3mj6_A Junctional adhesion mol 98.7 1.1E-07 3.8E-12 71.0 9.2 68 7-77 71-142 (268)
211 3r06_A Anti-mouse CD3epsilon a 98.7 1.1E-07 3.9E-12 68.7 9.0 77 6-82 59-141 (213)
212 2rb8_A Tenascin; beta sheet,lo 98.7 1.3E-07 4.6E-12 62.2 8.6 76 53-130 2-88 (104)
213 3s96_B 3B5H10 FAB light chain; 98.7 8.8E-08 3E-12 69.4 8.4 74 7-80 64-148 (218)
214 1x3d_A Fibronectin type-III do 98.7 2.6E-08 9E-13 66.4 5.1 68 67-134 30-109 (118)
215 2e7h_A Ephrin type-B receptor 98.7 1.4E-07 4.7E-12 62.2 8.6 69 67-135 20-101 (109)
216 2yuv_A Myosin-binding protein 98.7 1E-07 3.6E-12 61.6 7.8 47 2-52 47-93 (100)
217 3laf_A Deleted in colorectal c 98.7 6.8E-08 2.3E-12 76.0 8.2 106 18-127 275-394 (403)
218 4dep_C Interleukin-1 receptor 98.7 3E-08 1E-12 77.0 6.0 62 18-79 177-252 (349)
219 1x5g_A Neogenin; RGM binding, 98.7 2E-07 6.9E-12 61.7 9.2 68 67-134 30-107 (116)
220 1fhg_A Telokin; immunoglobulin 98.7 4.5E-08 1.5E-12 68.5 6.2 51 2-52 81-132 (154)
221 2a38_A Titin; Z1Z2, structural 98.6 5.7E-08 1.9E-12 68.9 6.8 51 2-52 143-193 (194)
222 2yrz_A Integrin beta-4; GP150, 98.6 5.2E-08 1.8E-12 64.9 6.2 77 52-129 16-104 (118)
223 3juy_B 3B3 single chain varian 98.6 2.9E-07 9.8E-12 68.8 10.9 35 6-40 71-107 (256)
224 2pet_A Lutheran blood group gl 98.6 2.6E-07 8.8E-12 67.2 10.4 69 19-88 78-154 (231)
225 2yd9_A Receptor-type tyrosine- 98.6 1.2E-07 4.1E-12 72.3 8.8 117 7-127 50-193 (304)
226 2dbj_A Proto-oncogene tyrosine 98.6 1.4E-07 4.7E-12 63.7 8.2 70 66-135 31-116 (124)
227 2q7n_A Leukemia inhibitory fac 98.6 1.4E-07 4.7E-12 78.4 9.8 110 15-125 248-374 (488)
228 3sgj_C Human FCG3A receptor; r 98.6 1.7E-08 5.7E-13 73.8 3.8 100 18-122 54-161 (204)
229 3b5h_A Cervical EMMPRIN, HAB18 98.6 6.6E-08 2.2E-12 68.4 6.8 47 6-52 134-181 (184)
230 2v5t_A NCAM2, N-CAM 2, neural 98.6 4.3E-08 1.5E-12 69.2 5.8 115 6-127 48-181 (189)
231 2ny1_B T-cell surface glycopro 98.6 1.9E-08 6.6E-13 71.4 4.0 99 17-125 67-170 (184)
232 4fom_A Poliovirus receptor-rel 98.6 3.2E-08 1.1E-12 75.5 5.4 106 18-127 172-293 (308)
233 1wio_A CD4, T-cell surface gly 98.6 1.2E-07 4E-12 74.2 8.7 90 17-120 254-350 (363)
234 3f7q_A Integrin beta-4, GP150; 98.6 1.3E-07 4.4E-12 70.1 8.5 112 16-129 56-191 (234)
235 3uzq_A Anti-dengue MAB 4E11; d 98.6 6E-07 2.1E-11 66.9 12.2 76 6-81 66-161 (253)
236 1bih_A Hemolin; insect immunit 98.6 7.4E-08 2.5E-12 75.6 7.5 76 16-91 60-138 (395)
237 2ee2_A Contactin-1; neural cel 98.6 2.2E-07 7.7E-12 62.0 8.8 69 67-135 31-111 (119)
238 1lk3_L 9D7 light chain; antige 98.6 1.8E-07 6E-12 67.7 8.9 75 6-80 58-138 (210)
239 3qs9_E FL cytokine receptor; i 98.6 1E-07 3.5E-12 79.4 8.6 102 17-127 377-503 (527)
240 2wv3_A Neuroplastin; igcam, me 98.6 1E-07 3.5E-12 67.8 7.6 47 5-51 140-187 (190)
241 3umt_A SCFV heavy chain and li 98.6 4.3E-07 1.5E-11 67.8 11.3 85 6-92 67-175 (256)
242 3pv7_A B7-H6, IG-like domain-c 98.6 1.3E-07 4.6E-12 70.0 8.4 73 17-89 81-155 (248)
243 2dmk_A Midline 2 isoform 2; mi 98.6 9.2E-08 3.1E-12 65.2 6.9 82 51-134 13-115 (127)
244 3m45_A Cell adhesion molecule 98.6 9.1E-08 3.1E-12 62.1 6.5 45 6-51 58-103 (108)
245 2yr3_A Myosin light chain kina 98.6 6.6E-08 2.3E-12 62.2 5.7 37 15-51 61-97 (99)
246 1cs6_A Axonin-1; neural cell a 98.6 9.2E-08 3.1E-12 74.9 7.6 106 16-126 255-374 (382)
247 1qz1_A Neural cell adhesion mo 98.6 4E-07 1.4E-11 68.5 10.9 81 6-88 49-134 (291)
248 3sob_L Antibody light chain; b 98.6 9.7E-08 3.3E-12 69.9 7.2 83 6-88 82-171 (237)
249 2dm7_A KIAA1556 protein; beta- 98.6 1.3E-07 4.3E-12 61.9 7.0 38 2-39 46-83 (108)
250 1q0x_L FAB 9B1, light chain; a 98.6 3.3E-07 1.1E-11 66.2 9.9 77 6-82 61-144 (212)
251 3l5i_A Interleukin-6 receptor 98.6 4.2E-07 1.4E-11 68.9 10.8 116 14-132 153-286 (290)
252 3cx2_A Myosin-binding protein 98.6 4.7E-08 1.6E-12 64.4 4.8 36 17-52 71-106 (108)
253 3vh8_G Killer cell immunoglobu 98.6 3.6E-07 1.2E-11 70.1 10.5 103 16-123 72-199 (316)
254 2wim_A N-CAM 2, NCAM2, neural 98.6 2.7E-07 9.3E-12 69.4 9.6 116 6-128 144-278 (291)
255 1va9_A DOWN syndrome cell adhe 98.6 3.2E-07 1.1E-11 61.0 9.0 68 67-134 28-114 (122)
256 1nfd_E H57 FAB; complex (immun 98.6 1.6E-07 5.4E-12 67.9 8.0 83 6-88 57-149 (212)
257 2j8h_A Titin, connectin; cardi 98.6 5.2E-08 1.8E-12 69.4 5.3 50 2-51 144-194 (197)
258 2cry_A KIN of IRRE-like protei 98.6 1.6E-08 5.4E-13 67.9 2.4 48 6-53 60-112 (122)
259 3qs9_E FL cytokine receptor; i 98.6 1.5E-07 5.1E-12 78.4 8.7 107 17-126 102-219 (527)
260 3gkz_A Anti-methamphetamine si 98.6 3.7E-07 1.3E-11 68.2 10.1 86 6-92 72-179 (257)
261 2edx_A Protein tyrosine phosph 98.6 5.1E-07 1.7E-11 61.0 9.8 68 67-134 31-115 (134)
262 3ry4_A Low affinity immunoglob 98.6 1.1E-07 3.8E-12 66.3 6.5 100 18-123 51-159 (170)
263 1wj3_A KIAA1496 protein; beta 98.6 2.9E-07 1E-11 61.9 8.4 68 67-134 30-108 (117)
264 2edj_A Roundabout homolog 2; K 98.6 2.7E-08 9.3E-13 64.2 3.1 43 6-51 53-95 (100)
265 4dkd_C Macrophage colony-stimu 98.6 6.4E-08 2.2E-12 72.9 5.5 115 7-124 40-170 (292)
266 1uem_A KIAA1568 protein; immun 98.6 7.9E-08 2.7E-12 63.8 5.4 80 51-131 13-105 (117)
267 2r15_A Myomesin-1; sarcomeric 98.6 9E-08 3.1E-12 68.8 6.0 51 2-52 157-208 (212)
268 2eo9_A Roundabout homolog 1; b 98.6 7.9E-08 2.7E-12 64.0 5.3 48 6-56 53-102 (118)
269 2dku_A KIAA1556 protein; beta- 98.6 2.1E-07 7.1E-12 60.4 7.2 52 2-57 47-100 (103)
270 1tdq_A Tenascin-R; extracellul 98.6 2.4E-06 8.3E-11 64.3 14.1 112 14-127 64-189 (283)
271 3mjg_X Beta-type platelet-deri 98.6 1.4E-07 4.9E-12 71.1 7.2 105 17-125 50-168 (289)
272 1ujt_A KIAA1568 protein; fibro 98.6 5.5E-07 1.9E-11 61.3 9.5 68 67-134 28-111 (120)
273 2v5y_A Receptor-type tyrosine- 98.6 1E-06 3.5E-11 75.5 13.2 113 16-130 314-453 (731)
274 1axi_B HGHBP, growth hormone r 98.6 3E-06 1E-10 63.6 14.3 81 52-132 129-231 (236)
275 1x9q_A SCFV, 4M5.3 anti-fluore 98.6 5.7E-07 1.9E-11 67.8 10.3 38 6-43 78-115 (268)
276 1z9m_A GAPA225; nectin-like, I 98.5 1.6E-07 5.4E-12 65.0 6.6 51 6-57 90-143 (145)
277 3fl7_A Ephrin receptor; ATP-bi 98.5 2E-08 7E-13 84.3 2.4 101 24-126 301-428 (536)
278 4fa8_A Secreted protein BARF1; 98.5 4.4E-08 1.5E-12 72.0 3.9 43 5-47 153-195 (203)
279 2va4_A NCAM2, N-CAM 2, neural 98.5 1.7E-07 5.7E-12 66.2 6.8 47 6-52 145-191 (192)
280 2edb_A Netrin receptor DCC; tu 98.5 2.7E-07 9.3E-12 61.8 7.4 60 69-128 31-101 (116)
281 3s35_X Vascular endothelial gr 98.5 5.2E-08 1.8E-12 65.1 3.8 37 16-52 72-108 (122)
282 3t1w_A Four-domain fibronectin 98.5 1.8E-06 6.2E-11 67.6 13.2 112 15-128 147-271 (375)
283 3t1w_A Four-domain fibronectin 98.5 1.4E-06 4.9E-11 68.2 12.6 113 15-129 56-181 (375)
284 3tv3_L PGT128 light chain, IG 98.5 2.5E-07 8.5E-12 66.8 7.7 83 6-88 56-147 (211)
285 1fnf_A Fibronectin; RGD, extra 98.5 2.8E-06 9.7E-11 66.2 14.3 112 15-128 55-179 (368)
286 2k1m_A Myosin-binding protein 98.5 1.8E-07 6.2E-12 60.0 6.2 45 2-50 47-91 (95)
287 3uto_A Twitchin; kinase, muscl 98.5 9E-08 3.1E-12 80.8 6.0 50 2-51 522-571 (573)
288 3teu_A Fibcon; FN3 domain, fib 98.5 3.9E-07 1.4E-11 58.8 7.8 63 67-130 14-87 (98)
289 2edd_A Netrin receptor DCC; tu 98.5 5.9E-07 2E-11 61.0 9.0 68 67-134 31-114 (123)
290 1qz1_A Neural cell adhesion mo 98.5 1.2E-07 4.2E-12 71.3 6.1 113 6-124 146-280 (291)
291 2y25_A Myomesin; structural pr 98.5 1.5E-07 5.1E-12 71.5 6.6 51 2-52 262-313 (317)
292 3tes_A Tencon; fibronectin typ 98.5 7.1E-07 2.4E-11 58.1 9.0 72 54-128 3-85 (98)
293 3s97_C Contactin-1; carbonic a 98.5 2.7E-07 9.2E-12 65.5 7.5 105 17-125 65-192 (201)
294 4i0k_A CD276 antigen; immunogl 98.5 8.1E-08 2.8E-12 69.8 4.8 108 17-129 71-201 (222)
295 1x5j_A Neogenin; RGM binding, 98.5 3.9E-07 1.3E-11 61.0 7.8 82 53-135 8-105 (113)
296 1fnf_A Fibronectin; RGD, extra 98.5 2.4E-06 8.3E-11 66.6 13.5 113 15-129 236-360 (368)
297 2vkw_A Neural cell adhesion mo 98.5 5.8E-07 2E-11 65.1 9.2 82 50-133 5-103 (209)
298 3kld_A Contactin 4, axcam, BIG 98.5 8.3E-07 2.8E-11 70.2 10.8 106 17-126 156-286 (384)
299 1tdq_A Tenascin-R; extracellul 98.5 2.5E-06 8.6E-11 64.3 12.9 109 17-128 159-278 (283)
300 2dlh_A Receptor-type tyrosine- 98.5 4.2E-07 1.4E-11 60.4 7.6 69 66-134 30-112 (121)
301 2cum_A Tenascin-X; hexabrachio 98.5 7E-07 2.4E-11 58.8 8.4 74 53-128 7-89 (105)
302 3rbg_A Cytotoxic and regulator 98.5 2.1E-07 7.2E-12 62.7 6.0 50 5-55 52-104 (124)
303 4frw_A Poliovirus receptor-rel 98.5 1.2E-06 4.2E-11 62.3 10.4 106 16-125 77-202 (218)
304 2eo1_A OBSCN protein, cDNA FLJ 98.5 1.2E-07 4E-12 61.5 4.4 40 2-41 50-89 (102)
305 2rcj_C Light chain; immunoglob 98.5 9.8E-07 3.4E-11 72.2 11.0 65 17-82 280-348 (523)
306 2ifg_A High affinity nerve gro 98.5 5.6E-08 1.9E-12 76.1 3.2 107 15-127 209-338 (347)
307 3bqu_C 3H6 FAB light chain; be 98.5 1.1E-07 3.9E-12 69.7 4.6 76 7-82 82-163 (233)
308 3fku_X Neutralizing antibody F 98.5 5.1E-07 1.8E-11 68.8 8.4 34 7-40 66-101 (280)
309 2edn_A Myosin-binding protein 98.5 1.4E-07 4.9E-12 64.2 4.5 46 6-51 62-113 (118)
310 3r8q_A Fibronectin; heparin, F 98.5 6.8E-06 2.3E-10 62.2 14.4 110 15-127 71-194 (290)
311 3o3u_N Maltose-binding peripla 98.5 1.9E-06 6.4E-11 71.5 12.1 79 7-88 424-507 (581)
312 1c1e_H Catalytic antibody 1E9 98.5 1.1E-06 3.9E-11 63.7 9.7 74 6-79 65-150 (219)
313 3khq_A B-cell antigen receptor 98.5 2.1E-07 7.1E-12 64.1 5.4 52 5-56 64-121 (133)
314 1x5i_A Neogenin; RGM binding, 98.5 3.8E-07 1.3E-11 62.0 6.6 62 69-130 41-113 (126)
315 2v9r_A Roundabout homolog 1; p 98.5 7.2E-08 2.5E-12 69.2 3.1 103 20-126 74-193 (212)
316 1pd6_A Cardiac MYBP-C;, myosin 98.5 1.5E-07 5.1E-12 61.9 4.3 40 2-41 55-95 (104)
317 2e6q_A Obscurin-like protein 1 98.5 4E-07 1.4E-11 61.3 6.5 54 1-55 45-108 (112)
318 3dmk_A DOWN syndrome cell adhe 98.5 6.3E-07 2.2E-11 77.1 9.3 107 18-128 306-419 (816)
319 3m8o_H Immunoglobulin A1 heavy 98.5 5.3E-06 1.8E-10 60.4 13.0 76 6-82 67-152 (221)
320 3b5h_A Cervical EMMPRIN, HAB18 98.5 1.3E-06 4.5E-11 61.5 9.4 105 17-127 50-176 (184)
321 3lcy_A Titin; A-BAND, IG tande 98.4 2.7E-07 9.1E-12 65.3 5.8 50 2-51 143-193 (197)
322 1z7z_I Intercellular adhesion 98.4 9.2E-07 3.1E-11 70.9 9.4 109 16-126 140-274 (450)
323 3caf_A Fibroblast growth facto 98.4 1.4E-07 4.9E-12 60.6 3.8 35 17-51 64-98 (100)
324 2xot_A Amphoterin-induced prot 98.4 4.4E-07 1.5E-11 71.8 7.3 62 7-81 294-355 (361)
325 1gl4_B Basement membrane-speci 98.4 2.1E-07 7.3E-12 59.7 4.5 34 18-51 62-95 (98)
326 3nl4_H Antigen binding fragmen 98.4 1.3E-06 4.4E-11 63.5 9.2 77 6-82 63-149 (215)
327 1pz5_B Heavy chain of FAB (SYA 98.4 1.5E-06 5.1E-11 63.3 9.5 75 6-80 67-152 (220)
328 1uc6_A CNTF receptor, ciliary 98.4 2E-06 6.7E-11 56.9 9.1 76 52-128 6-96 (109)
329 3bkj_L WO2 IGG2A FAB fragment 98.4 6.5E-07 2.2E-11 66.7 7.4 77 6-82 97-179 (252)
330 1wfn_A Sidekick 2; FN3, cell a 98.4 4.6E-07 1.6E-11 60.4 6.0 64 67-130 30-106 (119)
331 2q7n_A Leukemia inhibitory fac 98.4 2.3E-06 7.9E-11 71.1 11.4 115 18-134 347-484 (488)
332 3d9a_H Heavy chain of hyhel10 98.4 1.2E-06 4.1E-11 63.3 8.6 74 6-80 64-145 (210)
333 3u83_A Poliovirus receptor-rel 98.4 2.5E-06 8.5E-11 65.3 10.8 116 6-125 79-221 (331)
334 4dep_C Interleukin-1 receptor 98.4 4.9E-07 1.7E-11 70.0 6.8 102 18-122 79-201 (349)
335 1zlg_A Anosmin 1; insulin-like 98.4 3.2E-06 1.1E-10 72.3 12.4 114 16-129 221-365 (680)
336 3rjd_A High affinity immunoglo 98.4 3.8E-07 1.3E-11 67.4 5.9 102 17-124 47-157 (262)
337 4fqp_A Poliovirus receptor; im 98.4 2.5E-07 8.4E-12 70.9 4.9 41 18-58 268-308 (313)
338 3l5h_A Interleukin-6 receptor 98.4 9E-07 3.1E-11 73.5 8.6 104 24-127 164-288 (589)
339 2gee_A Hypothetical protein; f 98.4 2E-06 7E-11 62.3 9.5 89 37-127 4-106 (203)
340 1op3_H FAB 2G12, heavy chain; 98.4 2E-06 6.8E-11 63.2 9.4 77 6-82 65-157 (225)
341 2e7b_A Obscurin; IG-like domai 98.4 2.5E-07 8.4E-12 60.0 3.9 49 2-54 47-97 (103)
342 1q9r_B S25-2 FAB (IGG1K) heavy 98.4 1.9E-06 6.4E-11 62.8 9.0 75 6-80 67-154 (222)
343 3v6o_A Leptin receptor; recept 98.4 4.4E-06 1.5E-10 61.2 11.1 112 20-131 71-203 (206)
344 3l5i_A Interleukin-6 receptor 98.4 3E-06 1E-10 64.0 10.5 103 21-126 64-185 (290)
345 1x5h_A Neogenin; RGM binding, 98.4 3.8E-07 1.3E-11 61.7 4.9 69 66-134 30-113 (132)
346 3o4o_C Interleukin-1 receptor 98.4 4.8E-07 1.6E-11 69.8 5.9 103 18-124 81-206 (339)
347 3jz7_A MCAR, CAR, coxsackievir 98.4 3.4E-07 1.2E-11 65.4 4.6 38 17-54 175-212 (214)
348 1zlg_A Anosmin 1; insulin-like 98.4 1.5E-06 5.1E-11 74.4 9.4 104 26-132 131-258 (680)
349 1gsm_A Madcam-1, mucosal addre 98.4 2.6E-06 9.1E-11 63.3 9.5 67 15-83 56-124 (210)
350 2v5t_A NCAM2, N-CAM 2, neural 98.4 5.1E-07 1.7E-11 63.5 5.2 48 2-51 138-185 (189)
351 2gki_A Nuclease; anti-DNA anti 98.4 5.5E-06 1.9E-10 63.4 11.4 75 7-81 88-187 (291)
352 1j8k_A Fibronectin; EDA, TYPEI 98.4 1.1E-06 3.8E-11 56.3 6.4 63 67-130 14-87 (94)
353 2j6e_L IGM, FAB light chain; a 98.3 6.1E-07 2.1E-11 65.7 5.7 83 6-88 79-171 (234)
354 2ee3_A Collagen alpha-1(XX) ch 98.3 1.3E-06 4.4E-11 58.3 6.6 64 66-130 19-92 (108)
355 2yd6_A PTPRD protein; hydrolas 98.3 6.8E-07 2.3E-11 64.7 5.7 40 7-46 156-195 (212)
356 1wio_A CD4, T-cell surface gly 98.3 4.6E-06 1.6E-10 65.1 10.7 40 17-56 141-182 (363)
357 2ha1_A Fibronectin; beta sandw 98.3 3.4E-06 1.2E-10 60.7 9.3 59 68-126 15-84 (201)
358 3bpo_C Interleukin-13 receptor 98.3 6.6E-06 2.3E-10 63.5 11.5 113 18-132 155-308 (314)
359 3p3y_A Neurofascin; IG domains 98.3 4.1E-07 1.4E-11 71.4 4.6 105 17-124 72-198 (404)
360 2v5m_A Dscam; neurobiology SPL 98.3 2E-06 6.8E-11 67.3 8.5 65 17-81 58-131 (388)
361 1iga_A IGA1; immunoglobulin; N 98.3 1E-05 3.6E-10 65.6 13.1 77 6-82 66-155 (475)
362 4gos_A V-SET domain-containing 98.3 3.4E-07 1.2E-11 62.3 3.6 45 7-51 70-117 (125)
363 1zox_A CLM-1; IG-superfamily, 98.3 8.6E-07 2.9E-11 58.5 5.3 51 6-56 60-112 (113)
364 1dee_B IGM RF 2A2; FAB-IBP com 98.3 4.2E-06 1.4E-10 61.4 9.6 77 6-82 65-155 (223)
365 1pko_A Myelin oligodendrocyte 98.3 1.1E-06 3.7E-11 60.1 5.9 48 6-53 70-120 (139)
366 3r4d_A CEA-related cell adhesi 98.3 5.8E-07 2E-11 64.4 4.7 48 2-51 149-197 (208)
367 3t04_D Monobody 7C12; engineer 98.3 2.8E-06 9.6E-11 55.7 7.5 60 66-125 19-93 (103)
368 3ejj_X Macrophage colony-stimu 98.3 1.1E-06 3.8E-11 65.9 6.0 41 17-57 244-284 (289)
369 3zyj_A Leucine-rich repeat-con 98.3 8.5E-07 2.9E-11 71.7 5.6 43 7-52 389-431 (440)
370 1x5a_A Ephrin type-A receptor 98.3 2.8E-06 9.7E-11 56.0 7.2 68 67-135 22-99 (107)
371 1z7z_I Intercellular adhesion 98.3 5.3E-06 1.8E-10 66.4 10.1 103 15-123 47-167 (450)
372 3p4l_A Neogenin; iron homeosta 98.3 3.5E-06 1.2E-10 61.0 8.3 67 66-132 16-98 (211)
373 1c5d_H Monoclonal antibody aga 98.3 4E-06 1.4E-10 61.1 8.6 75 6-80 64-149 (215)
374 2ifg_A High affinity nerve gro 98.3 1.4E-06 4.8E-11 68.1 6.5 38 16-53 307-344 (347)
375 2fbj_H IGA-kappa J539 FAB (hea 98.3 6.1E-06 2.1E-10 60.4 9.6 77 6-82 65-151 (220)
376 1uen_A KIAA0343 protein; immun 98.3 1.7E-06 5.9E-11 57.7 6.1 68 67-134 27-116 (125)
377 3oq3_B IFN-alpha/beta binding 98.3 2.7E-06 9.3E-11 65.7 8.0 107 17-127 88-213 (329)
378 3bae_H WO2 IGG2A FAB fragment 98.3 4.4E-06 1.5E-10 61.4 8.8 75 6-80 66-157 (228)
379 1za6_B IGG heavy chain; immuno 98.3 2.3E-06 7.8E-11 66.6 7.5 77 6-82 65-149 (344)
380 2qsq_A Carcinoembryonic antige 98.3 9.1E-07 3.1E-11 59.3 4.5 43 6-51 63-106 (111)
381 2cuh_A Tenascin-X; fibronectin 98.3 1.2E-05 4E-10 53.5 10.0 74 53-128 7-89 (115)
382 1cs6_A Axonin-1; neural cell a 98.3 1.1E-06 3.6E-11 68.8 5.5 79 6-88 53-136 (382)
383 2or8_A Hepatitis A virus cellu 98.3 4.9E-07 1.7E-11 59.7 3.1 51 6-56 59-113 (116)
384 2x1w_L Vascular endothelial gr 98.3 8.9E-07 3E-11 64.4 4.7 36 17-52 170-205 (213)
385 3nfj_J T cell receptor beta ch 98.3 2.9E-06 1E-10 62.7 7.7 75 6-80 61-151 (245)
386 1eaj_A Coxsackie virus and ade 98.3 7.8E-07 2.7E-11 58.7 4.0 47 6-52 74-123 (126)
387 2o26_X MAST/stem cell growth f 98.3 1.6E-06 5.5E-11 65.4 6.3 38 16-53 250-287 (290)
388 1ry7_B FGFR-3, fibroblast grow 98.2 8.3E-07 2.8E-11 68.2 4.7 39 18-56 291-329 (334)
389 2oz4_A Intercellular adhesion 98.2 9.9E-07 3.4E-11 66.0 5.0 106 15-124 139-254 (265)
390 2ekj_A Collagen alpha-1(XX) ch 98.2 4.9E-07 1.7E-11 59.4 2.8 67 66-133 19-96 (105)
391 3lpw_A A77-A78 domain from tit 98.2 4.4E-06 1.5E-10 59.2 8.0 77 52-129 4-93 (197)
392 1bec_A 14.3.D T cell antigen r 98.2 5.3E-06 1.8E-10 61.3 8.7 75 6-80 59-148 (238)
393 1hxm_B Gamma-delta T-cell rece 98.2 2.8E-05 9.7E-10 57.6 12.6 78 5-82 65-161 (242)
394 3f7q_A Integrin beta-4, GP150; 98.2 6.5E-06 2.2E-10 60.8 8.9 78 53-132 5-92 (234)
395 3qwq_B Adnectin; cell surface 98.2 5E-06 1.7E-10 55.7 7.5 69 52-122 2-81 (114)
396 3ojm_B Fibroblast growth facto 98.2 9.1E-07 3.1E-11 64.0 4.1 41 17-57 184-226 (231)
397 2wng_A Tyrosine-protein phosph 98.2 4.2E-06 1.5E-10 64.3 8.1 104 18-124 180-309 (327)
398 1wk0_A KIAA0970 protein; fibro 98.2 3.1E-06 1E-10 59.0 6.6 69 66-134 29-118 (137)
399 2ocf_D Fibronectin; estrogen r 98.2 3.1E-06 1.1E-10 57.3 6.5 62 66-128 40-112 (121)
400 3so5_A LIG-3, leucine-rich rep 98.2 6.2E-07 2.1E-11 58.0 2.8 29 17-45 75-103 (112)
401 1neu_A Myelin P0 protein; stru 98.2 1.1E-06 3.8E-11 58.4 4.0 51 6-56 67-121 (124)
402 2b5i_C Cytokine receptor commo 98.2 6.4E-05 2.2E-09 54.6 13.9 106 29-135 69-194 (199)
403 1mju_H Immunoglobulin MS6-12; 98.2 7.1E-06 2.4E-10 60.4 8.8 75 6-80 65-148 (227)
404 1qgc_4 Protein (immunoglobulin 98.2 5.9E-06 2E-10 65.7 8.9 83 6-88 283-379 (438)
405 2iep_A Muscle-specific kinase 98.2 9.7E-07 3.3E-11 62.3 3.9 41 3-46 141-181 (192)
406 3rrq_A Protein PD-1, programme 98.2 2.1E-06 7.2E-11 58.5 5.4 49 6-54 61-117 (129)
407 4dzb_B Vbeta2 (MAIT T cell rec 98.2 4.7E-06 1.6E-10 61.5 7.7 76 7-82 65-154 (246)
408 2wbj_D OB TCR; transmembrane, 98.2 5.2E-06 1.8E-10 62.9 8.1 77 6-82 87-179 (279)
409 2q87_A CMRF35-H antigen; all-b 98.2 1.9E-06 6.6E-11 56.6 5.0 49 6-54 54-108 (110)
410 3laf_A Deleted in colorectal c 98.2 2E-06 6.9E-11 67.5 5.9 48 3-53 353-400 (403)
411 3mj6_A Junctional adhesion mol 98.2 9.6E-07 3.3E-11 65.8 3.6 42 16-57 199-240 (268)
412 2cr6_A KIAA1556 protein, obscu 98.2 7E-07 2.4E-11 59.2 2.4 46 2-51 53-99 (115)
413 3mjg_X Beta-type platelet-deri 98.2 3E-06 1E-10 63.7 6.0 36 16-51 240-275 (289)
414 1jhl_L IGG1-kappa D11.15 FV (l 98.2 2.4E-06 8.1E-11 56.0 4.8 36 6-41 59-94 (108)
415 3omz_A Human vdelta1 gamma del 98.2 1.3E-05 4.5E-10 59.7 9.5 28 15-42 76-103 (259)
416 3k2m_C Monobody HA4; engineere 98.2 1.3E-05 4.4E-10 52.2 8.2 57 67-123 17-85 (101)
417 3pl6_D MBP peptide / T-cell re 98.1 4.1E-06 1.4E-10 62.8 6.3 76 7-82 88-175 (268)
418 1hzh_H IGG, immunoglobulin hea 98.1 1.1E-05 3.9E-10 64.9 9.3 77 6-82 65-161 (457)
419 3udw_C Poliovirus receptor; PV 98.1 1.7E-06 5.9E-11 56.6 3.7 46 6-51 62-113 (118)
420 3qht_C Monobody YSMB-1; fibron 98.1 4.6E-06 1.6E-10 53.8 5.7 61 67-128 17-88 (97)
421 3grw_A Fibroblast growth facto 98.1 2.5E-06 8.6E-11 62.4 4.8 42 16-57 180-223 (241)
422 1k85_A Chitinase A1; fibronect 98.1 5.5E-06 1.9E-10 52.4 5.7 64 67-132 16-86 (88)
423 3zyi_A Leucine-rich repeat-con 98.1 2.1E-06 7.1E-11 69.7 4.5 43 7-52 399-441 (452)
424 2wqr_A IG epsilon chain C regi 98.1 6.2E-06 2.1E-10 63.5 6.9 65 17-81 177-247 (323)
425 2qbw_A PDZ-fibronectin fusion 98.1 1.2E-05 4E-10 58.4 8.0 65 67-132 116-191 (195)
426 2vr9_A Roundabout 1, ROBO; imm 98.1 2.6E-06 9E-11 61.4 4.5 40 5-47 160-199 (217)
427 3qr2_A Basigin; CD147, EMMPRIN 98.1 1.8E-06 6E-11 58.9 3.3 30 16-45 88-117 (137)
428 2ny1_B T-cell surface glycopro 98.1 2.6E-06 8.8E-11 60.2 4.3 40 17-56 142-183 (184)
429 2xqy_G A13-D6.3 monoclonal ant 98.1 1.9E-05 6.6E-10 59.7 9.4 75 6-80 71-156 (261)
430 3v2a_R Vascular endothelial gr 98.1 4E-06 1.4E-10 71.2 5.4 110 16-129 288-412 (772)
431 1ugn_A LIR1, leukocyte immunog 98.1 6.4E-06 2.2E-10 59.0 5.7 27 16-42 155-181 (198)
432 3bn9_D E2 FAB heavy chain; ant 98.1 9.5E-06 3.3E-10 61.5 7.0 37 6-42 65-103 (257)
433 1dn0_B IGM-kappa cold agglutin 98.1 1.9E-05 6.4E-10 58.3 8.4 75 6-80 64-153 (232)
434 2oyp_A Hepatitis A virus cellu 98.1 2.4E-06 8.2E-11 55.4 3.1 44 6-49 58-103 (109)
435 3e0g_A Leukemia inhibitory fac 98.0 9.4E-05 3.2E-09 61.3 13.4 114 18-133 342-478 (483)
436 3up1_A Interleukin-7 receptor 98.0 6.6E-05 2.3E-09 56.3 11.4 101 41-141 95-221 (223)
437 3bfo_A Mucosa-associated lymph 98.0 2.9E-06 9.8E-11 53.7 3.3 29 17-45 49-77 (91)
438 2ibg_A CG9211-PA, GH03927P; IH 98.0 1.9E-05 6.4E-10 57.1 8.2 62 67-128 14-100 (214)
439 1ypz_F T-cell receptor gamma c 98.0 2.2E-05 7.7E-10 57.8 8.6 35 6-40 65-101 (230)
440 2dkm_A Collagen alpha-1(XX) ch 98.0 2.7E-05 9.1E-10 50.9 8.0 60 67-128 21-91 (104)
441 1ncn_A T lymphocyte activation 98.0 5.7E-06 1.9E-10 54.1 4.7 43 7-51 60-102 (110)
442 2erj_C Cytokine receptor commo 98.0 0.00021 7.1E-09 54.0 14.0 106 28-134 106-231 (247)
443 3qhz_H Human monoclonal antibo 98.0 2.8E-05 9.7E-10 57.0 8.9 75 7-82 70-161 (232)
444 4f80_A Butyrophilin subfamily 98.0 5.1E-06 1.7E-10 60.6 4.7 38 15-52 174-211 (226)
445 3lb6_C IL-13, interleukin-13 r 98.0 3.7E-05 1.3E-09 61.5 10.1 99 29-128 8-122 (380)
446 4i0k_A CD276 antigen; immunogl 98.0 1E-05 3.5E-10 58.4 6.3 39 15-53 167-205 (222)
447 2or7_A T-cell immunoglobulin a 98.0 3.5E-06 1.2E-10 55.8 3.4 51 6-56 60-112 (115)
448 4frw_A Poliovirus receptor-rel 98.0 4.7E-06 1.6E-10 59.2 4.2 35 17-51 174-208 (218)
449 2ens_A Advanced glycosylation 98.0 5.9E-06 2E-10 52.7 4.2 31 16-46 55-85 (96)
450 3q0h_A T cell immunoreceptor w 98.0 7.8E-06 2.7E-10 54.7 5.0 48 6-56 62-112 (117)
451 1h5b_A Murine T cell receptor 98.0 5.7E-06 2E-10 54.6 4.3 37 6-42 56-95 (113)
452 1igt_B IGG2A intact antibody - 98.0 3E-05 1E-09 62.1 9.3 75 6-80 65-150 (444)
453 3s97_C Contactin-1; carbonic a 98.0 3.9E-06 1.3E-10 59.3 3.7 37 16-52 163-199 (201)
454 2v9r_A Roundabout homolog 1; p 98.0 3.4E-06 1.2E-10 60.3 3.3 29 18-46 165-193 (212)
455 1eer_B Epobp, erythropoietin r 98.0 5.7E-05 1.9E-09 55.9 10.1 82 52-133 120-220 (227)
456 1f97_A Junction adhesion molec 98.0 2.6E-06 8.8E-11 60.8 2.6 37 15-51 166-204 (212)
457 1itb_B Type 1 interleukin-1 re 98.0 5E-06 1.7E-10 63.3 4.3 37 17-53 276-313 (315)
458 2vol_A Murine IGG FC; FC, zinc 98.0 8.8E-06 3E-10 59.0 5.4 63 18-80 68-136 (207)
459 4ei6_B Vbeta16 XV19 type II na 98.0 1.5E-05 5.3E-10 58.6 6.8 76 7-82 64-153 (245)
460 2v44_A NCAM2, neural cell adhe 98.0 7.4E-06 2.5E-10 57.7 4.7 40 5-47 141-180 (189)
461 2yd1_A Tyrosine-protein phosph 98.0 5E-06 1.7E-10 60.0 3.8 42 6-51 155-197 (212)
462 3n9g_H FAB fragment of MAB CR4 98.0 4.4E-05 1.5E-09 56.1 9.0 77 6-82 65-157 (230)
463 2q20_A VK1 O18/O8 germline lig 98.0 6.8E-06 2.3E-10 54.0 4.1 35 6-40 61-95 (109)
464 3q5y_A TCR N15 beta; IG, T cel 98.0 2.9E-05 1E-09 57.0 7.9 74 7-80 63-149 (240)
465 2w1n_A O-GLCNACASE NAGJ; hexos 98.0 5.9E-06 2E-10 61.8 3.9 68 66-133 162-235 (238)
466 1oga_E TRBC1, T-cell receptor 98.0 2.8E-05 9.5E-10 58.0 7.7 76 6-82 63-152 (252)
467 3liz_H 4C3 monoclonal antibody 97.9 2.4E-05 8.4E-10 58.4 7.4 75 6-80 65-151 (253)
468 1qr4_A Protein (tenascin); fib 97.9 5.9E-05 2E-09 53.4 9.1 73 53-127 6-87 (186)
469 1xt5_A Variable region-contain 97.9 5.1E-06 1.8E-10 56.0 3.2 43 7-50 82-129 (135)
470 3uzq_A Anti-dengue MAB 4E11; d 97.9 1E-05 3.4E-10 60.2 5.1 38 6-43 195-232 (253)
471 2v9t_A Roundabout homolog 1; s 97.9 2.8E-06 9.6E-11 56.1 1.8 23 24-46 78-100 (117)
472 3l5h_A Interleukin-6 receptor 97.9 6.2E-05 2.1E-09 62.3 10.3 112 18-129 259-391 (589)
473 1i8k_A Epidermal growth factor 97.9 8.2E-06 2.8E-10 53.4 4.1 35 6-40 59-93 (107)
474 1j05_L T84.66 antibody, anti-C 97.9 8.9E-06 3E-10 53.5 4.1 35 6-40 63-97 (111)
475 3v2a_R Vascular endothelial gr 97.9 1.3E-06 4.6E-11 74.2 0.0 53 2-56 706-760 (772)
476 1f2q_A High affinity immunoglo 97.9 8.1E-06 2.8E-10 57.3 4.1 40 16-55 132-174 (176)
477 2e27_L Anti-ciguatoxin antibod 97.9 9.2E-06 3.2E-10 54.5 4.2 35 6-40 61-95 (119)
478 3to4_D NKT vbeta2 (mouse varia 97.9 2.9E-05 1E-09 57.8 7.4 72 8-80 65-151 (253)
479 3tv3_H PGT128 heavy chain, IG 97.9 4.7E-05 1.6E-09 56.4 8.4 75 7-82 73-169 (239)
480 2wqr_A IG epsilon chain C regi 97.9 3.7E-05 1.3E-09 59.1 8.1 65 18-82 72-142 (323)
481 3bp6_B Programmed cell death 1 97.9 1.6E-05 5.6E-10 56.7 5.7 39 14-52 153-191 (202)
482 2id5_A Lingo-1, leucine rich r 97.9 6.7E-06 2.3E-10 66.8 4.0 43 6-51 432-474 (477)
483 2fbo_J V1V2;, variable region- 97.9 6.7E-06 2.3E-10 60.3 3.6 33 18-50 213-248 (250)
484 3d85_D IL-12B, interleukin-12 97.9 5E-05 1.7E-09 59.1 8.8 28 17-47 50-77 (306)
485 1mqk_L Antibody 7E2 FV fragmen 97.9 9.7E-06 3.3E-10 54.4 4.1 35 6-40 59-93 (120)
486 3kg5_A B-cell antigen receptor 97.9 5.4E-05 1.8E-09 52.2 7.9 54 6-59 68-126 (134)
487 3sgj_C Human FCG3A receptor; r 97.9 7.8E-06 2.7E-10 59.4 3.8 41 17-57 136-179 (204)
488 2p1y_A Bispecific alpha/beta T 97.9 1.5E-05 5E-10 58.4 5.3 36 6-41 185-222 (238)
489 1qfw_M FV, antibody (anti beta 97.9 7.5E-06 2.6E-10 53.7 3.3 35 6-40 59-93 (108)
490 4fmk_A Poliovirus receptor-rel 97.9 9.6E-06 3.3E-10 57.8 4.2 32 18-49 181-212 (225)
491 1ypz_E T cell receptor delta, 97.9 5.2E-05 1.8E-09 55.2 8.2 36 6-41 56-94 (207)
492 1iga_A IGA1; immunoglobulin; N 97.9 3.9E-05 1.3E-09 62.2 8.1 65 17-81 308-378 (475)
493 2cui_A Tenascin-X; fibronectin 97.9 4.2E-05 1.4E-09 51.1 6.9 61 66-127 20-99 (112)
494 1jbj_A CD3 epsilon and gamma e 97.9 3.6E-06 1.2E-10 60.2 1.7 30 15-44 150-179 (186)
495 2rgs_A I, IG gamma-2B heavy ch 97.9 1.1E-05 3.8E-10 58.9 4.4 64 17-80 75-144 (218)
496 3p2t_A Leukocyte immunoglobuli 97.9 1E-05 3.5E-10 57.8 4.1 28 16-43 153-180 (196)
497 3qib_D 2B4 beta chain; IG doma 97.9 3.9E-05 1.3E-09 57.5 7.5 73 8-80 90-176 (270)
498 4gjt_B Poliovirus receptor-rel 97.9 1.5E-05 5E-10 53.6 4.6 46 7-52 66-115 (123)
499 1sy6_A T-cell surface glycopro 97.9 1.9E-05 6.5E-10 57.4 5.4 27 15-41 46-72 (204)
500 2oz4_A Intercellular adhesion 97.9 9.2E-05 3.1E-09 55.1 9.3 67 19-88 57-130 (265)
No 1
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.80 E-value=2.1e-18 Score=126.89 Aligned_cols=131 Identities=15% Similarity=0.196 Sum_probs=100.8
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecCCCCCCCCeEEEEEEec---CCC
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVS---SYT 81 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~---~~~ 81 (152)
.++.+...+..+.|.|.+++.+|+|.|+|.|.|..|.....+.|. .+|.+|..... .....++.|.|..+ ++.
T Consensus 65 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~--~~~~~~~~l~w~~p~~~~~~ 142 (215)
T 3mtr_A 65 SNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQV--EPYSSTAQVQFDEPEATGGV 142 (215)
T ss_dssp CSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCEEEEE--EEETTEEEEEEECCSCCCSS
T ss_pred ccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCcceEE--EEecceEEEEEecCCccCCC
Confidence 678888777789999999999999999999999999988865554 56776654321 23467899999854 456
Q ss_pred CcceEEEEEEECCCCCCCc-----------ceE---EecCCCeEEEEEEEEcCCCCCCCCCCcccccccccc
Q psy15979 82 PLEEFKIKYRKIPGNEPSP-----------MSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIVPKAKRE 139 (152)
Q Consensus 82 pi~~y~~~~r~~~~~~~~~-----------~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~~~~~~ 139 (152)
|+..|.++|+......+.. ..+ .|.+++.|+|||.|.|.+|.|+++....+...++|.
T Consensus 143 pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 143 PILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp CEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 8999999999876543221 233 466699999999999999999999888777766653
No 2
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.71 E-value=5.1e-16 Score=118.82 Aligned_cols=128 Identities=18% Similarity=0.237 Sum_probs=98.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEce-eCCCCCEEEEEEEEcCCCceEEEEEE--ecCCCCceeecCCCCCCCCeEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRK-VVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVS 78 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~-v~~~D~G~YtC~A~N~~G~~~~~~~v--~~~P~p~~~~~~~~~~~~~~~~L~W~~~ 78 (152)
+|..+.++.+...+....|.|.+ ++.+|+|.|+|.|.|.+|.....+.| ...|.||..... .....+++.|+|..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~-~~~~~~~v~l~w~~p 222 (305)
T 2nzi_A 144 LIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKV-SDVSRDSVNLTWTEP 222 (305)
T ss_dssp BCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEE-ESCCSSCEEEEEECC
T ss_pred ECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCcee-eeccCCEEEEEEcCC
Confidence 45667788888777788999999 99999999999999999998886554 467776654321 123568999999964
Q ss_pred ---CCCCcceEEEEEEECCCCCCC------cceEE---ecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 79 ---SYTPLEEFKIKYRKIPGNEPS------PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 79 ---~~~pi~~y~~~~r~~~~~~~~------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
+..++..|.++++......+. ...+. |.+++.|+|||.|.|.+|.|+++...
T Consensus 223 ~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~ 286 (305)
T 2nzi_A 223 ASDGGSKITNYIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPS 286 (305)
T ss_dssp SCCSBSCEEEEEEEEEETTSCCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCC
T ss_pred ccCCCCceeEEEEEEecCCCCccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCC
Confidence 456889999999887544322 13343 55589999999999999999998754
No 3
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.64 E-value=9.9e-15 Score=115.15 Aligned_cols=125 Identities=15% Similarity=0.217 Sum_probs=94.1
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecCCCCCCCCeEEEEEEec---CCC
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVS---SYT 81 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~---~~~ 81 (152)
.++.+...+..+.|.|.+++.+|+|.|+|+|.|..|.....+.|. ..|.+|..... ......++.|.|..+ ++.
T Consensus 147 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~-~~~~~~~~~l~w~~p~~~~g~ 225 (389)
T 2jll_A 147 TNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKI-IELSQTTAKVSFNKPDSHGGV 225 (389)
T ss_dssp TTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEE-EEECSSCEEEEEECCSCCTTS
T ss_pred ceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEE-eeccCCEEEEEEeCCCCCCCc
Confidence 478888777788999999999999999999999999988865554 56666532211 123457899999864 345
Q ss_pred CcceEEEEEEECCCCCCC-------cceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 82 PLEEFKIKYRKIPGNEPS-------PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 82 pi~~y~~~~r~~~~~~~~-------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
|+..|.++|+..+...+. ...+. |.+++.|+|+|.|.|.+|.|.++....+
T Consensus 226 pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~ 286 (389)
T 2jll_A 226 PIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIF 286 (389)
T ss_dssp CEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEE
T ss_pred ceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEE
Confidence 888999999987653321 13344 5559999999999999999998876533
No 4
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.44 E-value=4.8e-13 Score=114.83 Aligned_cols=115 Identities=15% Similarity=0.131 Sum_probs=83.7
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCc-eEE--EEEEecCCCCceeecCCCCCCCCeEEEEEEec---CCCCcceEEEEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGK-HRA--YLELSGKPNPAIFRSHPQGRLPNSYNITWMVS---SYTPLEEFKIKY 90 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~-~~~--~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~---~~~pi~~y~~~~ 90 (152)
.++|.|.++++.|+|.|+|+|.|.+|. ... .+.|..+|.|+..... .....+++.|.|..+ +..++..|.++|
T Consensus 222 ~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~-~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~ 300 (731)
T 2v5y_A 222 IASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQL-ASVGATYLWIQLNANSINGDGPIVAREVEY 300 (731)
T ss_dssp EEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEE-EEECSSCEEEECCCSSBSSCSCCCEEEEEE
T ss_pred eEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcce-eccCCceEEEEeCCcccCCCCccEEEEEEE
Confidence 578999999999999999999999997 333 4566666654321100 123467899999874 346899999999
Q ss_pred EECCCCC-----CCcceE---EecCCCeEEEEEEEE--cCCCCCCCCCCccc
Q psy15979 91 RKIPGNE-----PSPMSN---QLTGTNQYQNRRLVR--KRFDRGNSTNGGLI 132 (152)
Q Consensus 91 r~~~~~~-----~~~~~~---~L~~~~~Y~~rV~A~--N~~G~g~~s~~~~~ 132 (152)
+...... .....+ .|.+++.|+|+|.|. |..|.|.++....+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~ 352 (731)
T 2v5y_A 301 CTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRT 352 (731)
T ss_dssp EESSSSCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEE
T ss_pred EECCCCceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEe
Confidence 9864321 111334 456699999999999 99999998876543
No 5
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.42 E-value=9.3e-13 Score=103.77 Aligned_cols=113 Identities=15% Similarity=0.173 Sum_probs=80.1
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEe----cCCCCceeecCCCCCCCCeEEEEEEec--CCCCcceE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELS----GKPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEF 86 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~----~~P~p~~~~~~~~~~~~~~~~L~W~~~--~~~pi~~y 86 (152)
+....|.|.++.+.|.|.|+|.|.|.+|....+ +.+. .+|.||.+... ....+++.|+|..+ ++.++..|
T Consensus 249 ~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p~~~~~--~~~~~~v~l~W~~p~~~~~~i~~Y 326 (389)
T 2jll_A 249 GVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQ--PSSGKSFKLSITKQDDGGAPILEY 326 (389)
T ss_dssp TTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCCCEEEE--EETTTEEEEEECCCCCCSSCCCEE
T ss_pred CCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCCccccc--cCcCCEEEEEEECCCCCCCcccEE
Confidence 345789999999999999999999999976542 2222 25666654321 23578999999974 35689999
Q ss_pred EEEEEECCCCCCC--------cceEE---ecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 87 KIKYRKIPGNEPS--------PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 87 ~~~~r~~~~~~~~--------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
.++|+......+. ...+. |.+++.|+|||.|.|..|.|+++..
T Consensus 327 ~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~ 380 (389)
T 2jll_A 327 IVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY 380 (389)
T ss_dssp EEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE
T ss_pred EEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee
Confidence 9999985433211 13344 5569999999999999999998854
No 6
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.36 E-value=3.5e-12 Score=98.96 Aligned_cols=110 Identities=12% Similarity=-0.066 Sum_probs=75.1
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEecCCCCceeecCCCCCCCCeEEEEEEecCC-CCcceEEEEEEECC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY-TPLEEFKIKYRKIP 94 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~-~pi~~y~~~~r~~~ 94 (152)
+.|+|.+++.+|+|.|+|+|.|..+..... +.+..+|.+|....-......+++.++|..+.. .....|.++|+...
T Consensus 61 ~~L~i~~~~~~d~g~y~c~~~~~~~~~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~ 140 (313)
T 2d9q_B 61 SIITLPHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSR 140 (313)
T ss_dssp EEEEESCCCSSEEEEEEEEESSSSEEEEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECC
T ss_pred EEEEEeccCCCccceEEeeecCCCceeEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecC
Confidence 789999999999999999998766654433 444567777664421111125789999997542 12346999998764
Q ss_pred CC------C-------CCcc--eEE---ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 95 GN------E-------PSPM--SNQ---LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 95 ~~------~-------~~~~--~~~---L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.. . .... .+. |.+++.|+|+|.|.|.+|.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~ 191 (313)
T 2d9q_B 141 GNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSP 191 (313)
T ss_dssp TTSCSCCCCEEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECC
T ss_pred CCcccCCcccccCCCCCCCcEEEECccccccceeEEEEEEEECCCCCccCc
Confidence 21 0 0111 222 66799999999999999997543
No 7
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.33 E-value=1.7e-11 Score=94.52 Aligned_cols=116 Identities=9% Similarity=-0.000 Sum_probs=78.4
Q ss_pred cEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE-----EEEEecCCCCceeecCCCCCCCCeEEEEEEecCC-C
Q psy15979 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-----YLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY-T 81 (152)
Q Consensus 8 r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-----~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~-~ 81 (152)
++.+.+ +..+.|.|.+++++| |.|+|.|.|. |.... .+.+..+|.+|....-. .....++.|+|..+.. .
T Consensus 56 ~~~~~~-~~~~~L~i~~~~~~~-g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~-~~~~~~v~l~W~~~~~~~ 131 (303)
T 1i1r_A 56 QYTIIN-RTASSVTFTDIASLN-IQLTCNILTF-GQLEQNVYGITIISGLPPEKPKNLSCI-VNEGKKMRCEWDGGRETH 131 (303)
T ss_dssp GCEEEE-TTEEEEEECSCCCSE-EEEEEEEEET-TTEEEEEEEEEEEEECCCCCCEEEEEE-EETTSCCEEEEECCSCCS
T ss_pred heeeeC-CcEEEEEEcCcCCCc-eEEEEecccC-CCcceEEEEEEEeccCCCCCCeeeEEE-ECCCCcEEEEccCCCCCC
Confidence 555553 346789999999885 9999999884 54332 24455678777633211 1234789999997532 2
Q ss_pred CcceEEEEEEECCCCC------C-CcceE---Ee-cCCCeEEEEEEEEcCCCCCCCC
Q psy15979 82 PLEEFKIKYRKIPGNE------P-SPMSN---QL-TGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 82 pi~~y~~~~r~~~~~~------~-~~~~~---~L-~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.+..|.++|+...... . ...++ .| .+++.|+|||.|.|.+|.|.++
T Consensus 132 ~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~ 188 (303)
T 1i1r_A 132 LETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSD 188 (303)
T ss_dssp SCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECC
T ss_pred CCcCEEEEEEecCCCCccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcccC
Confidence 3568999998653211 1 11233 35 6799999999999999999754
No 8
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.29 E-value=1e-11 Score=84.50 Aligned_cols=76 Identities=18% Similarity=0.263 Sum_probs=58.0
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEec--CCCCcceEEEEEEECCCCCCC--------cceE---EecCCCeEEEEEEEE
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKYRKIPGNEPS--------PMSN---QLTGTNQYQNRRLVR 118 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~--~~~pi~~y~~~~r~~~~~~~~--------~~~~---~L~~~~~Y~~rV~A~ 118 (152)
..|.||.+.... ...+++.|.|... +++||..|.++|+......+. ..++ .|.+++.|+|||.|.
T Consensus 7 ~~P~pP~~~~~~--~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 7 REPSPPSIHGQP--SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp CCCCSCCEECCB--CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEE
T ss_pred CCccCCcccccc--cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEE
Confidence 467777665432 4679999999874 668999999999997543321 1234 466699999999999
Q ss_pred cCCCCCCCCCC
Q psy15979 119 KRFDRGNSTNG 129 (152)
Q Consensus 119 N~~G~g~~s~~ 129 (152)
|..|.|+|+..
T Consensus 85 N~~G~s~pS~~ 95 (114)
T 2kbg_A 85 NRLGYSEPTVY 95 (114)
T ss_dssp CTTSCEEEEEE
T ss_pred eCCcCcCCcCC
Confidence 99999998864
No 9
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.28 E-value=1.5e-11 Score=90.83 Aligned_cols=115 Identities=13% Similarity=0.036 Sum_probs=75.1
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC---CCCCCCeEEEEEEecCCCCc
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMVSSYTPL 83 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~---~~~~~~~~~L~W~~~~~~pi 83 (152)
.++.+...++...|.|.+++.+|+|.|+|+|.|..|.....+.|...+.| .+...+ .......+.|.|.+.+.++.
T Consensus 58 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~-~~~~~~~~~~v~~g~~~~l~C~~~G~P~P 136 (203)
T 4fa8_A 58 GFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPL-TLSVHSERSQFPDFSVLTVTCTVNAFPHP 136 (203)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE-EEEEEEEECCSSCSCCEEEEEEEEEESCC
T ss_pred ceEEEEEcCCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecCCc-eeeecceeEEEcCCCEEEEEEEcCCCCCC
Confidence 45667667778899999999999999999999999999988777765433 222111 12246789999998775432
Q ss_pred ceEEEEEEE--CCC----C-C-----CCcce------EEecCCCeEEEEEEEEcCCCCCC
Q psy15979 84 EEFKIKYRK--IPG----N-E-----PSPMS------NQLTGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 84 ~~y~~~~r~--~~~----~-~-----~~~~~------~~L~~~~~Y~~rV~A~N~~G~g~ 125 (152)
...|.+.. ... . . .++.. ...++.+.|.| .|+|.+|..+
T Consensus 137 -~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC--~A~N~~G~a~ 193 (203)
T 4fa8_A 137 -HVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTC--VGKNDKEEAH 193 (203)
T ss_dssp -EEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEE--EEESSSCEEE
T ss_pred -EEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEE--EEEcCCCEEE
Confidence 34442211 000 0 0 11111 12345889998 8899999754
No 10
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.22 E-value=7.5e-11 Score=98.43 Aligned_cols=124 Identities=14% Similarity=0.227 Sum_probs=83.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC---CCCCCeEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVS 78 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~ 78 (152)
+|..+.++.+..++..++|.|.+++.+|+|.|+|+|.|.+|.+.....|.... ||.+...+. ......+.|.|.+.
T Consensus 424 ~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~-~P~~~~~~~~~~~~~g~~~~l~c~~~ 502 (570)
T 3b43_A 424 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKA-PPRFVKKLSDISTVVGEEVQLQATIE 502 (570)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECC-CCEEEECCCCBCCBTTCCEEEEEEEE
T ss_pred ECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEecc-CCcccccCCCceecCCCeEEEEEEEe
Confidence 46678899998877788999999999999999999999999998876665443 333332221 22467899999998
Q ss_pred CCCCcceEEEEEE--ECCC-CC-------CCcceEEe-----cCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 79 SYTPLEEFKIKYR--KIPG-NE-------PSPMSNQL-----TGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 79 ~~~pi~~y~~~~r--~~~~-~~-------~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
+.+++ .+.|... .... .. .....+.| .+.+.|.| .|.|.+|..+.++.
T Consensus 503 g~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~G~~~~~a~ 565 (570)
T 3b43_A 503 GAEPI-SVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTC--QIKNEAGTQECFAT 565 (570)
T ss_dssp SCSSC-CCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEE--EEECSSCEEEEEEE
T ss_pred cCCCC-EEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEE--EEEECCcEEEEEEE
Confidence 76543 3444321 1111 11 01122333 44899998 78999998876543
No 11
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.20 E-value=2e-10 Score=82.98 Aligned_cols=120 Identities=18% Similarity=0.269 Sum_probs=79.0
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC--------------------CCCceeec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK--------------------PNPAIFRS 61 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~--------------------P~p~~~~~ 61 (152)
+|..++|+.+...+....|.|.+++.+|+|.|+|+|.|..|.....+.|.+. +.|+....
T Consensus 43 ~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 122 (212)
T 2r15_A 43 AIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGG 122 (212)
T ss_dssp ECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEB
T ss_pred EccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCcccccccCCCccccc
Confidence 4666789998887888889999999999999999999999999888877532 12333322
Q ss_pred CCC---CCCCCeEEEEEEecCCCCcceEEEEEEEC---CCCCC-------C-cceEEecC-----CCeEEEEEEEEcCCC
Q psy15979 62 HPQ---GRLPNSYNITWMVSSYTPLEEFKIKYRKI---PGNEP-------S-PMSNQLTG-----TNQYQNRRLVRKRFD 122 (152)
Q Consensus 62 ~~~---~~~~~~~~L~W~~~~~~pi~~y~~~~r~~---~~~~~-------~-~~~~~L~~-----~~~Y~~rV~A~N~~G 122 (152)
.+. ......+.|.|.+.+.++. .+.| ++.. ..... . ...+.|.. .+.|.| .|.|.+|
T Consensus 123 ~~~~~~v~~g~~~~l~C~~~g~p~p-~v~W-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~g 198 (212)
T 2r15_A 123 LPDVVTIQEGKALNLTCNVWGDPPP-EVSW-LKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGL--VVKNKYG 198 (212)
T ss_dssp CCSEEEEETTCCEEEEEEEECSSCC-EEEE-EETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEE--EEEETTE
T ss_pred CCCcEEEccCCeEEEEEEEcCCCCc-eEEE-EECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEE--EEEcCCC
Confidence 111 1235789999998875443 3444 3321 11100 0 01333333 778988 6799998
Q ss_pred CCC
Q psy15979 123 RGN 125 (152)
Q Consensus 123 ~g~ 125 (152)
...
T Consensus 199 ~~~ 201 (212)
T 2r15_A 199 SET 201 (212)
T ss_dssp EEE
T ss_pred cEE
Confidence 753
No 12
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.20 E-value=1.4e-11 Score=82.24 Aligned_cols=51 Identities=27% Similarity=0.487 Sum_probs=45.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..++|+.+..++..++|.|.+++.+|+|.|+|+|+|.+|.+++++.|.+
T Consensus 53 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 103 (107)
T 3knb_B 53 QLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp ECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEE
Confidence 577889999988888899999999999999999999999999988766653
No 13
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.18 E-value=3e-10 Score=80.85 Aligned_cols=120 Identities=19% Similarity=0.210 Sum_probs=74.3
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce-EEEEEEecCCCCceeecC-C-CCCCCCeEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-RAYLELSGKPNPAIFRSH-P-QGRLPNSYNITWMVS 78 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~~~~~v~~~P~p~~~~~~-~-~~~~~~~~~L~W~~~ 78 (152)
+|..+.|+.+...+....|.|.+++.+|+|.|+|.|.|..|.. ...+.|.....|...... + .......+.|.|.+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 121 (189)
T 2v44_A 42 KIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVS 121 (189)
T ss_dssp BCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEE
T ss_pred ccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEEC
Confidence 4566789999888888899999999999999999999999987 334444332222111100 0 012357789999987
Q ss_pred CCCCcceEEEEEEECCCC---C-----CCcceEEe-----cCCCeEEEEEEEEcCCCCC
Q psy15979 79 SYTPLEEFKIKYRKIPGN---E-----PSPMSNQL-----TGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 79 ~~~pi~~y~~~~r~~~~~---~-----~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g 124 (152)
+.++. .+.|........ . .....+.| .+.+.|.| .|.|.+|..
T Consensus 122 g~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~~~~ 177 (189)
T 2v44_A 122 SSPAP-AVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRC--EGRVEARGE 177 (189)
T ss_dssp CSSCC-EEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEE--EEEETTTTE
T ss_pred cCCCC-cEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEE--EEEccccCc
Confidence 65433 455433221110 0 01123333 33789998 679988654
No 14
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.17 E-value=5.2e-10 Score=80.47 Aligned_cols=118 Identities=14% Similarity=0.215 Sum_probs=73.2
Q ss_pred CCcEEEEE---cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEE--ecCCCCceeecCCCCCCCCeEEEEEEecCC
Q psy15979 6 TERRIMET---RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVSSY 80 (152)
Q Consensus 6 ~~r~~i~~---~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v--~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~ 80 (152)
.+|+.+.. .....+|.|.+++.+|+|.|+|.|.|..|.....+.| ..+|..+.............+.|.|.+...
T Consensus 69 ~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g 148 (214)
T 3jz7_A 69 KGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEG 148 (214)
T ss_dssp TTTEEESCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBC
T ss_pred ccceEEeccCccCCcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCC
Confidence 34555532 2246779999999999999999999999987776544 455544333222223346789999998433
Q ss_pred CCcceEEEEEEECCCCC-C-------CcceEEecC-----CCeEEEEEEEEcCCCCCCC
Q psy15979 81 TPLEEFKIKYRKIPGNE-P-------SPMSNQLTG-----TNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 81 ~pi~~y~~~~r~~~~~~-~-------~~~~~~L~~-----~~~Y~~rV~A~N~~G~g~~ 126 (152)
.|...+.| ++...... . ....+.|.. .+.|.| .|.|.+|....
T Consensus 149 ~p~~~v~W-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~g~~~~ 204 (214)
T 3jz7_A 149 SLPLQFEW-QKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSC--TVQNRVGSDQC 204 (214)
T ss_dssp CSSCEEEE-EECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEE--EEECSSCEEEE
T ss_pred CCCCEEEE-EECCCCCccCccceeccCCCEEEEecCCHHHCEEEEE--EEEcCCCcEEE
Confidence 34444554 33221111 1 112333333 788988 67999987643
No 15
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=1.6e-10 Score=74.85 Aligned_cols=76 Identities=17% Similarity=0.373 Sum_probs=59.2
Q ss_pred cCCCCc-eeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCC--------CCcceEEecC---CCeEEEEEEEEc
Q psy15979 52 GKPNPA-IFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE--------PSPMSNQLTG---TNQYQNRRLVRK 119 (152)
Q Consensus 52 ~~P~p~-~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~--------~~~~~~~L~~---~~~Y~~rV~A~N 119 (152)
+.|.|. .+...+.+. .++..|+|.+++.+||.+|++.||...... ....+|.|++ +..||+.|.+.|
T Consensus 4 ~~~gpa~v~is~~~s~-pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~Ip~h~nSYtI~GL~P~~~YE~qv~S~~ 82 (98)
T 1oww_A 4 GSSGPVEVFITETPSQ-PNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQ 82 (98)
T ss_dssp --CCCCEEECCCCSSC-TTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEEECSSCCEEEECSCCSSEEEEEEEEEEE
T ss_pred CCCcceEEEecCCCCC-CCccceEEecCCCCCceEEEEEEEEcCCCCceeEEEecCccceEEEecCCCCcEEEEEEEEee
Confidence 467777 555444444 899999999999999999999999987643 1236776555 999999999999
Q ss_pred CCCCCCCCC
Q psy15979 120 RFDRGNSTN 128 (152)
Q Consensus 120 ~~G~g~~s~ 128 (152)
+||+.|.|-
T Consensus 83 ryG~~Evs~ 91 (98)
T 1oww_A 83 QYGHQEVTR 91 (98)
T ss_dssp SSSCEEEEE
T ss_pred ccCcccceE
Confidence 999998873
No 16
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=1.3e-10 Score=77.40 Aligned_cols=57 Identities=21% Similarity=0.374 Sum_probs=47.1
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEE--EecCCCCce
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLE--LSGKPNPAI 58 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~--v~~~P~p~~ 58 (152)
+|..++|+.+......+.|.|.+++.+|+|.|+|+|.|..|.+...+. |..+|.||.
T Consensus 47 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 47 QIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp BCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEECSCSCCC
T ss_pred ECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEECCCCCCC
Confidence 466678999987777889999999999999999999999998887544 446676553
No 17
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.13 E-value=4.7e-10 Score=80.36 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=64.7
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeecCCC---CCCCCeEEEEEEecCCCCcceEEEEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKIKY 90 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~pi~~y~~~~ 90 (152)
.+.|.|.+++.+|+|.|+|.|.|..|.... .+.|...| .+...+. ......+.|.|.+.+.++...+.|.
T Consensus 67 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p---~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~- 142 (195)
T 2c5d_C 67 VSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLP---YFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWL- 142 (195)
T ss_dssp EEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSC---EEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEE-
T ss_pred ccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEecCC---eEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEE-
Confidence 578999999999999999999999887544 34444433 2222111 1235789999999776443245543
Q ss_pred EECCCCCC-----CcceEE---ecCCCeEEEEEEEEcCCCCCC
Q psy15979 91 RKIPGNEP-----SPMSNQ---LTGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 91 r~~~~~~~-----~~~~~~---L~~~~~Y~~rV~A~N~~G~g~ 125 (152)
+....-.. ....+. +++.+.|.| .|.|.+|...
T Consensus 143 ~~~~~~~~~~~~~~~~~L~i~~~~d~G~Y~C--~a~N~~g~~~ 183 (195)
T 2c5d_C 143 QDAVPLATAPGHGPQRSLHVPGLNKTSSFSC--EAHNAKGVTT 183 (195)
T ss_dssp ESSCBSSSSTTSSCCEEEEECCCSSCEEEEE--EEEETTEEEE
T ss_pred ECCEeccCCCCcCCCCeEEEcccccCceEEE--EEEcCCCceE
Confidence 32211110 122233 344788988 7799999764
No 18
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.12 E-value=9.7e-10 Score=80.91 Aligned_cols=121 Identities=12% Similarity=0.138 Sum_probs=73.9
Q ss_pred cccCCCcEEEEEcC--CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cC------------------CCCcee
Q psy15979 2 RLETTERRIMETRG--SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GK------------------PNPAIF 59 (152)
Q Consensus 2 ~l~~~~r~~i~~~~--~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~------------------P~p~~~ 59 (152)
+|..++|+.+..++ ...+|.|.+++.+|+|.|+|.|.| |.+...+.+. +. ..+|.+
T Consensus 43 ~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 120 (207)
T 3rbs_A 43 EIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHF 120 (207)
T ss_dssp EECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEE
T ss_pred ECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCce
Confidence 56677888886544 556899999999999999999999 6655544331 10 013333
Q ss_pred ecCC--CCCCCCeEEEEEEecCCCCcceEEEEEEE---CCCC-C--C--CcceEEec-----CCCeEEEEEEEEcCCCCC
Q psy15979 60 RSHP--QGRLPNSYNITWMVSSYTPLEEFKIKYRK---IPGN-E--P--SPMSNQLT-----GTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 60 ~~~~--~~~~~~~~~L~W~~~~~~pi~~y~~~~r~---~~~~-~--~--~~~~~~L~-----~~~~Y~~rV~A~N~~G~g 124 (152)
.... .......+.|.|.+.+..|...+.| ++. .... . . ....+.|. +.+.|.| .|.|.+|..
T Consensus 121 ~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W-~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C--~a~N~~G~~ 197 (207)
T 3rbs_A 121 VEYLSWEVTGECNVLLKCKVANIKKETHIVW-YKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEV--ILKDDRGKD 197 (207)
T ss_dssp EEEEEEEEETTTEEEEEEEEESCCTTCEEEE-EETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEE--EEEETTEEE
T ss_pred EecCCcEEcCCCcEEEEEEEeCCCCCCEEEE-EECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEE--EEEcCCCEE
Confidence 2111 1123678999999877634445555 332 1111 1 1 11223333 3899988 789999976
Q ss_pred CCC
Q psy15979 125 NST 127 (152)
Q Consensus 125 ~~s 127 (152)
..+
T Consensus 198 ~~~ 200 (207)
T 3rbs_A 198 KSR 200 (207)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 19
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.11 E-value=2.6e-10 Score=82.26 Aligned_cols=113 Identities=12% Similarity=0.185 Sum_probs=71.2
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCC----ceEEEEEEecCCCCceeecCCC--CCCCCeEEEEEEecCCCCcceEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMG----KHRAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G----~~~~~~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
.....|.|.+++.+|+|.|+|.|.|..| +....+.|.+.+.+|.+...+. ......++|.|.+.+. + ..|.|
T Consensus 55 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~-~-~~~~w 132 (196)
T 3p2t_A 55 KNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSP-M-DTFLL 132 (196)
T ss_dssp SSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEEE-E-EEEEE
T ss_pred CceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCCC-C-CEEEE
Confidence 4568899999999999999999999998 2333566665555555443221 1246789999988653 2 23443
Q ss_pred EEEECCCCCCC-----------cceEEe-----cCCCeEEEEEEEEcCCC---CCCCCCCccc
Q psy15979 89 KYRKIPGNEPS-----------PMSNQL-----TGTNQYQNRRLVRKRFD---RGNSTNGGLI 132 (152)
Q Consensus 89 ~~r~~~~~~~~-----------~~~~~L-----~~~~~Y~~rV~A~N~~G---~g~~s~~~~~ 132 (152)
++........ ...+.| .+.+.|.| .|.|.+| ++.+++...+
T Consensus 133 -~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~~~~~~s~~S~~~~l 192 (196)
T 3p2t_A 133 -CKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRC--FSSHGFSHYLLSHPSDPLEL 192 (196)
T ss_dssp -EETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEE--EEECGGGTTEECCCCCCEEE
T ss_pred -EeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEE--EEEcCCCCcccCCCCCCEEE
Confidence 3322111000 112333 34899999 7899988 5666665543
No 20
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.10 E-value=5e-10 Score=81.64 Aligned_cols=117 Identities=14% Similarity=0.164 Sum_probs=81.5
Q ss_pred EEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEe---c-CCCCceeecCCCCCCCCeEEEEEEec--CCCCcceEEEEE
Q psy15979 19 TLMIRKVVASDFGNYSCEATNPMGKHRAY--LELS---G-KPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKY 90 (152)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~---~-~P~p~~~~~~~~~~~~~~~~L~W~~~--~~~pi~~y~~~~ 90 (152)
.+.|.++.+...-.|.+.|.|..|....+ +.+. . .|.+|.... ......+++.|+|..+ .+.++..|.|+|
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~-~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~ 147 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEG-QMGEDGNSIKVNLIKQDDGGSPIRHYLVRY 147 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEE-EECTTSSCEEEEEECCCCTTSCCCEEEEEE
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCCCCCCCCcccc-cccccCCeEEEEEECcccCCCCCceEEEEE
Confidence 67899999999999999999999865432 2222 1 455544321 1134568999999986 456899999999
Q ss_pred EECCCCC------C-CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccccccc
Q psy15979 91 RKIPGNE------P-SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIVPKA 136 (152)
Q Consensus 91 r~~~~~~------~-~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~~~ 136 (152)
+...... . ...++. |.+++.|+|+|.|.|..|.|+++....+..++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~~~ 203 (209)
T 2vkw_A 148 RALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAAA 203 (209)
T ss_dssp EETTSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC--
T ss_pred ECCCCCCceeeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhhhh
Confidence 9832211 1 113444 55599999999999999999998766554443
No 21
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.10 E-value=1.1e-09 Score=78.83 Aligned_cols=119 Identities=13% Similarity=0.198 Sum_probs=71.7
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCC--ceEE--EEEEecCCCCceeecCCCCCCCCeEEEEEE-ecCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG--KHRA--YLELSGKPNPAIFRSHPQGRLPNSYNITWM-VSSY 80 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G--~~~~--~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~-~~~~ 80 (152)
+.|+.+.. ..|.|.+++.+|+|.|+|.|.|..| .... .+.|..+|..+.............+.|.|. ..+.
T Consensus 57 ~~r~~~~~----~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 132 (212)
T 1f97_A 57 ADRVTFSS----SGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGS 132 (212)
T ss_dssp TTTEEEET----TEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCB
T ss_pred cCcEEeec----eeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCc
Confidence 56777652 6899999999999999999999988 3333 344555555443332211223578999999 4554
Q ss_pred CCcceEEEEEEECC----CCC--------------CCcceEEe-----cCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 81 TPLEEFKIKYRKIP----GNE--------------PSPMSNQL-----TGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 81 ~pi~~y~~~~r~~~----~~~--------------~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
++ ..+.|. +... ... .....+.| .+.+.|.| .|.|.+|....+....+
T Consensus 133 p~-~~i~W~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~~s~~~~l 203 (212)
T 1f97_A 133 PP-SEYSWF-KDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYC--QAQNGYGTAMRSEAAHM 203 (212)
T ss_dssp SC-CEEEEE-ETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEE--EEECSSSCCEECCCEEE
T ss_pred CC-CEEEEE-eCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEE--EEccccCCccccceEEE
Confidence 43 345443 3211 100 00122333 33778988 77999998755554433
No 22
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.10 E-value=3.2e-10 Score=80.71 Aligned_cols=120 Identities=19% Similarity=0.272 Sum_probs=75.3
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC-----CCCCCCeEEEEEE
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP-----QGRLPNSYNITWM 76 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~-----~~~~~~~~~L~W~ 76 (152)
+|..+.++.+...+...+|.|.+++.+|+|.|+|.|.|..|.....+.|.....|......+ .......+.|.|.
T Consensus 47 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~ 126 (197)
T 3lcy_A 47 ELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVM 126 (197)
T ss_dssp EECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEE
T ss_pred ECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEE
Confidence 35567888888888888999999999999999999999999887765554221111110000 0123578899999
Q ss_pred ecCCCCcceEEEEEEEC---CCCCC-----Cc--ceEEe------cCCCeEEEEEEEEcCCCCCC
Q psy15979 77 VSSYTPLEEFKIKYRKI---PGNEP-----SP--MSNQL------TGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 77 ~~~~~pi~~y~~~~r~~---~~~~~-----~~--~~~~L------~~~~~Y~~rV~A~N~~G~g~ 125 (152)
+.+.++. .+.| ++.. ..... .. ..+.| ++.+.|.| .|.|.+|...
T Consensus 127 ~~~~p~p-~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C--~a~n~~g~~~ 187 (197)
T 3lcy_A 127 YIGRPVP-AMTW-FHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKV--QLSNVFGTVD 187 (197)
T ss_dssp EEEESCC-EEEE-EETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEE--EEECSSCEEE
T ss_pred EeeeeCC-eeEE-eECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEE--EEEcCcCceE
Confidence 8765443 3444 3321 11110 00 12222 34788988 6799999763
No 23
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.09 E-value=1.5e-10 Score=76.16 Aligned_cols=47 Identities=26% Similarity=0.274 Sum_probs=41.7
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+.|+.+...+..++|.|.+++.+|+|.|+|+|+|.+|.+++.+.|.+
T Consensus 51 ~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 97 (100)
T 3knb_A 51 QGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97 (100)
T ss_dssp GGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEE
Confidence 35788888888899999999999999999999999999988776653
No 24
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.08 E-value=2.6e-10 Score=76.73 Aligned_cols=66 Identities=12% Similarity=0.078 Sum_probs=51.3
Q ss_pred CCeEEEEEEec--CCCCcceEEEEEEECCCCCCC---------cceEE---ecCCCeEEEEEEEEcCCCCCCCCCCcccc
Q psy15979 68 PNSYNITWMVS--SYTPLEEFKIKYRKIPGNEPS---------PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIV 133 (152)
Q Consensus 68 ~~~~~L~W~~~--~~~pi~~y~~~~r~~~~~~~~---------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~ 133 (152)
.+++.|+|..+ ++.+|..|.|+|+.. ...+. ...+. |.+++.|+|||.|.|..|.|+||+...+.
T Consensus 20 ~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~ 98 (108)
T 1v5j_A 20 PRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVS 98 (108)
T ss_dssp SSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCC
T ss_pred CCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEE
Confidence 57899999986 456899999999983 33221 13443 55699999999999999999999877665
Q ss_pred c
Q psy15979 134 P 134 (152)
Q Consensus 134 ~ 134 (152)
.
T Consensus 99 T 99 (108)
T 1v5j_A 99 T 99 (108)
T ss_dssp C
T ss_pred e
Confidence 4
No 25
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.08 E-value=3.4e-09 Score=82.70 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=74.8
Q ss_pred EeEEEEceeC-CCCCEEEEEEEEcCCCceEE---EEEEe--cCCCCceeecC-CCCCCCCeEEEEEEecC----CCCcce
Q psy15979 17 RHTLMIRKVV-ASDFGNYSCEATNPMGKHRA---YLELS--GKPNPAIFRSH-PQGRLPNSYNITWMVSS----YTPLEE 85 (152)
Q Consensus 17 ~~~L~I~~v~-~~D~G~YtC~A~N~~G~~~~---~~~v~--~~P~p~~~~~~-~~~~~~~~~~L~W~~~~----~~pi~~ 85 (152)
...+.|..+. ......+.|.|.|.+|.... .+.+. .+|.||..... .......++.|+|..+. ..++..
T Consensus 154 ~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~ 233 (325)
T 1n26_A 154 KFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLR 233 (325)
T ss_dssp EEEEEECCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEE
T ss_pred CEEEEECCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEE
Confidence 3456676654 34556668999999998653 23222 46777754321 12223468999999863 246789
Q ss_pred EEEEEEECCCCCCC-------cceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 86 FKIKYRKIPGNEPS-------PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 86 y~~~~r~~~~~~~~-------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
|.|+|+......+. ...+. |.+++.|+|||+|.|.+|.|.+|.
T Consensus 234 Y~V~yr~~~~~~W~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~ 286 (325)
T 1n26_A 234 FELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE 286 (325)
T ss_dssp EEEEEEETTCSCCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCC
T ss_pred EEEEEEeCCCCCCEEEcccCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcC
Confidence 99999987654322 13344 556999999999999999776654
No 26
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.07 E-value=2.2e-09 Score=78.16 Aligned_cols=117 Identities=18% Similarity=0.208 Sum_probs=72.6
Q ss_pred cCCEeEEEEcee-CCCCCEEEEEEEEcCCCceEEEEEEe--cC----CCCceeecCCCC---CCCCeEEEEEEecCCCCc
Q psy15979 14 RGSRHTLMIRKV-VASDFGNYSCEATNPMGKHRAYLELS--GK----PNPAIFRSHPQG---RLPNSYNITWMVSSYTPL 83 (152)
Q Consensus 14 ~~~~~~L~I~~v-~~~D~G~YtC~A~N~~G~~~~~~~v~--~~----P~p~~~~~~~~~---~~~~~~~L~W~~~~~~pi 83 (152)
.+....|.|.++ +.+|+|.|+|.|.|..|.....+.|. .. |.+|.+...+.. .....+.|.|.+.+.++.
T Consensus 59 ~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p 138 (212)
T 2yd6_A 59 DGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDP 138 (212)
T ss_dssp GGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCC
T ss_pred CCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCC
Confidence 345778999999 59999999999999999987765554 22 222343332211 135789999999776443
Q ss_pred ceEEEEEEEC---CCCC--C--------CcceEEe-----cCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 84 EEFKIKYRKI---PGNE--P--------SPMSNQL-----TGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 84 ~~y~~~~r~~---~~~~--~--------~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
.+.| ++.. .... . ....+.| .+.+.|.| .|.|.+|....+...+.+.
T Consensus 139 -~v~W-~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 139 -EITW-FKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYEC--VATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp -EEEE-EETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEE--EEEETTEEEECCCEEEEEE
T ss_pred -eEEE-EECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEE--EEECCCCccccccccEEEE
Confidence 3444 3321 1100 0 0122233 33788988 7799999887776554433
No 27
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.07 E-value=1.1e-09 Score=92.06 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=78.2
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeecCCC-CCCCCeEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHPQ-GRLPNSYNITWMV 77 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~~~~-~~~~~~~~L~W~~ 77 (152)
+|..+.|+.+... ++.|.|.+++.+|+|.|+|.|.|..|...+ .+.|...|..+....... ......+.|.|.+
T Consensus 506 ~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~ 583 (642)
T 1e07_A 506 SLPVSPRLQLSNG--NRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHS 583 (642)
T ss_pred eCCCCCcEEEcCC--CcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEe
Confidence 4566677777533 468999999999999999999999998644 344444443222211111 1235789999999
Q ss_pred cCCCCcceEEEEEEECCCCCCCcceE-----EecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 78 SSYTPLEEFKIKYRKIPGNEPSPMSN-----QLTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 78 ~~~~pi~~y~~~~r~~~~~~~~~~~~-----~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
.+.++. .+.|.. . +..-.....+ ...+.+.|.| .|.|.+|....+....+
T Consensus 584 ~g~p~p-~v~W~~-~-g~~i~~~~~L~i~~~~~~d~G~Y~C--~a~N~~G~~~~s~~l~V 638 (642)
T 1e07_A 584 ASNPSP-QYSWRI-N-GIPQQHTQVLFIAKITPNNNGTYAC--FVSNLATGRNNSIVKSI 638 (642)
T ss_pred ccCCCC-eEEEEE-C-CEECccCceEEECcccccCCeEEEE--EEEecccCcceeEEEEE
Confidence 876544 455432 1 1111111222 3444888988 88999998866654444
No 28
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.07 E-value=1.8e-09 Score=76.89 Aligned_cols=114 Identities=21% Similarity=0.204 Sum_probs=72.3
Q ss_pred cEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecCCC---CCCCCeEEEEEEecCCCC
Q psy15979 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTP 82 (152)
Q Consensus 8 r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~p 82 (152)
++.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.|. ..+.||.+...+. ......+.|.|.+.+.++
T Consensus 53 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 132 (194)
T 2a38_A 53 GVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPT 132 (194)
T ss_dssp TCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESC
T ss_pred ceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecC
Confidence 56665556778999999999999999999999999888765444 4444554443221 123578899999876544
Q ss_pred cceEEEEEEEC---CCCCC------Cc-ceEE-----ecCCCeEEEEEEEEcCCCCCC
Q psy15979 83 LEEFKIKYRKI---PGNEP------SP-MSNQ-----LTGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 83 i~~y~~~~r~~---~~~~~------~~-~~~~-----L~~~~~Y~~rV~A~N~~G~g~ 125 (152)
. .+.| ++.. ..... .. ..+. ..+.+.|.| .|.|.+|...
T Consensus 133 ~-~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~ 186 (194)
T 2a38_A 133 P-VVKF-YRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSV--NATNSVGRAT 186 (194)
T ss_dssp C-EEEE-EETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEE--EEEETTEEEE
T ss_pred C-eEEE-EECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEE--EEEeCCCceE
Confidence 3 3444 3321 11100 00 0222 234788988 6789998753
No 29
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.07 E-value=8.6e-09 Score=75.05 Aligned_cols=118 Identities=9% Similarity=0.025 Sum_probs=82.6
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEE-----EEEe-cC----CCCceeecCCCCCCCCeEEEEEEec---CCCCc
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAY-----LELS-GK----PNPAIFRSHPQGRLPNSYNITWMVS---SYTPL 83 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-----~~v~-~~----P~p~~~~~~~~~~~~~~~~L~W~~~---~~~pi 83 (152)
...+.|.++.+...-.|.+.|.|..|..... +.+. +. |.+|.... ......+++.|.|..+ ...++
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~-~~~~~~~sv~l~W~~p~~~~~~~i 147 (214)
T 2ibg_A 69 SFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLE-IEEYSETAVVLHWSLASDADEHLI 147 (214)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECC-CBCCSSSCEEEEEECCTTCCGGGC
T ss_pred ceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccE-EEEccCCeEEEEEeCCCccCCCCc
Confidence 4467899999998899999999999976543 2221 21 22233221 1223468899999986 34678
Q ss_pred ceEEEEEEECCC-CCCC--------cceEE---ecCCCeEEEEEEEEcCCCCCCCCCCcccccc
Q psy15979 84 EEFKIKYRKIPG-NEPS--------PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIVPK 135 (152)
Q Consensus 84 ~~y~~~~r~~~~-~~~~--------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~~ 135 (152)
..|.++|+.... ..+. ...+. |.+++.|.|||.|.|..|.|.++....+.++
T Consensus 148 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 211 (214)
T 2ibg_A 148 TGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQ 211 (214)
T ss_dssp CEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred ceEEEEEEECCCCcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEec
Confidence 999999998765 2211 23444 5559999999999999999999987765543
No 30
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.07 E-value=1.7e-09 Score=79.01 Aligned_cols=109 Identities=14% Similarity=0.161 Sum_probs=68.0
Q ss_pred cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecCCCCCCCCeEEEEEEecCCCCcc--eEEEE
Q psy15979 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLE--EFKIK 89 (152)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~--~y~~~ 89 (152)
.+..+.|.|.+++.+|+|.|+|.|.|..|..+..+.|. ..|..+.+........+..+.|.|.+.+..|.. .+.|
T Consensus 50 ~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W- 128 (202)
T 1vca_A 50 EGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDL- 128 (202)
T ss_dssp ETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEE-
T ss_pred cCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEE-
Confidence 34567899999999999999999999999877655554 455433333222223467899999987654432 2333
Q ss_pred EEECC-------CCCC-----C--cceEEecC-----CCeEEEEEEEEcCCCCCC
Q psy15979 90 YRKIP-------GNEP-----S--PMSNQLTG-----TNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 90 ~r~~~-------~~~~-----~--~~~~~L~~-----~~~Y~~rV~A~N~~G~g~ 125 (152)
++... .... . ...+.+.. ++.|.| .|.|..|..+
T Consensus 129 ~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC--~A~n~~~~~~ 181 (202)
T 1vca_A 129 LKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVC--RAKLHIDEMD 181 (202)
T ss_dssp EETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEE--EEEECSCCCT
T ss_pred EeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEE--EEEccccCCC
Confidence 32210 0000 0 11223332 778999 6799988764
No 31
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=2.2e-10 Score=75.33 Aligned_cols=54 Identities=19% Similarity=0.290 Sum_probs=45.9
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~ 55 (152)
+|..++|+.+..++..+.|.|.+++.+|+|.|+|+|.|...+..+.+.|..+|.
T Consensus 45 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 45 PVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAYNVTLPAKVHVISGPS 98 (100)
T ss_dssp ECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSSCCCEEEEEEEECCSC
T ss_pred ECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCCCeeEEEEEEEeCCCC
Confidence 567789999998888889999999999999999999999666666777766653
No 32
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.06 E-value=6e-10 Score=79.82 Aligned_cols=109 Identities=12% Similarity=0.079 Sum_probs=69.5
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce--EEEEE--EecCCCCceeecCCCCCCCCeEEEEEEecCC
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLE--LSGKPNPAIFRSHPQGRLPNSYNITWMVSSY 80 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~~~--v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~ 80 (152)
.++|+.+..+ ++|.|.+++.+|+|.|+|.|.|..|.. +..+. |...+.+|.+.. ....+.|.|.+.+.
T Consensus 51 ~~~r~~~~~~---gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~~p~i~~-----~~~~v~L~C~~~g~ 122 (176)
T 1hng_A 51 KSGAFEILAN---GDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMIYW-----ECSNATLTCEVLEG 122 (176)
T ss_dssp SSTTEEECTT---SCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCCCCEEEE-----ETTTTEEEEECSSC
T ss_pred CCCeEEECCC---CcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCCCCEEEe-----cCCcEEEEEEecCC
Confidence 4678888433 359999999999999999999999987 44444 444444344332 12348899988776
Q ss_pred CCcceEEEEEEECCCCC---CC-c-ceEEecCCCeEEEEEEEEcCCCCCCC
Q psy15979 81 TPLEEFKIKYRKIPGNE---PS-P-MSNQLTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 81 ~pi~~y~~~~r~~~~~~---~~-~-~~~~L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
++ ..+.|. +. +..- .. . ......+.+.|.| .|.|.+|....
T Consensus 123 p~-p~i~W~-~~-g~~l~~~~~~~i~~~~~~d~G~Y~C--~a~N~~g~~~~ 168 (176)
T 1hng_A 123 TD-VELKLY-QG-KEHLRSLRQKTMSYQWTNLRAPFKC--KAVNRVSQESE 168 (176)
T ss_dssp SS-CEEEEE-ET-TEEEEEESSSEEEEECSCCSSCEEE--EEEETTEEEEE
T ss_pred CC-cEEEEE-EC-CEECCCCCcEEEEEEEccCCeEEEE--EEEecCCCcee
Confidence 54 345543 21 1000 00 0 1223455899999 78999997643
No 33
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.05 E-value=8.3e-10 Score=92.10 Aligned_cols=123 Identities=18% Similarity=0.289 Sum_probs=79.3
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC---CCCCCeEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVS 78 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~ 78 (152)
+|..+.++.+...+....|.|.+++.+|+|.|+|+|.|..|.+.....|.... ||.+...+. ......+.|.|.+.
T Consensus 331 ~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~-~P~~~~~~~~~~~~~G~~v~l~C~~~ 409 (570)
T 3b43_A 331 EIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE-PPVFRKKPHPVETLKGADVHLECELQ 409 (570)
T ss_dssp ECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEEC-CCEECSCCCCEEECTTCCEEEEEEEE
T ss_pred ECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecC-CCeeecCCCceeecCCCEEEEEEEEe
Confidence 45667788877666788999999999999999999999999998876665432 223322221 12357899999998
Q ss_pred CCCCcceEEEEE--EECCCCCC-------CcceEEe-----cCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 79 SYTPLEEFKIKY--RKIPGNEP-------SPMSNQL-----TGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 79 ~~~pi~~y~~~~--r~~~~~~~-------~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
+.++. .+.|.. +....... ...++.| ++.+.|.| .|.|.+|....+.
T Consensus 410 g~P~p-~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C--~A~N~~G~~~~~~ 470 (570)
T 3b43_A 410 GTPPF-QVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQC--KASNDVGSDTCVG 470 (570)
T ss_dssp SSSSC-CCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEE--EEECSSCEEEEEE
T ss_pred cCCCC-EEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEE--EEEECCCeEEEEE
Confidence 76543 344422 11111110 0012223 33788988 7899999765443
No 34
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.05 E-value=1.1e-10 Score=85.83 Aligned_cols=110 Identities=16% Similarity=0.138 Sum_probs=65.6
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~ 95 (152)
+..+|.|.+++.+|+|.|+|+|.|..|..+..+.+...+.+..............+.|.|.+.+..|...+.| ++..+.
T Consensus 81 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W-~k~~~~ 159 (226)
T 4f80_A 81 GKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQW-SNNKGE 159 (226)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEE-ECTTSC
T ss_pred CeEEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEE-EECCce
Confidence 4678999999999999999999999999988877765443221111111123577888888766434334444 322111
Q ss_pred CC---------CCc------ceEEe--cCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 96 NE---------PSP------MSNQL--TGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 96 ~~---------~~~------~~~~L--~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
.. ... ....+ ++.+.|.| .|.|.+|..+.+.
T Consensus 160 ~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC--~a~N~~g~~~~~~ 207 (226)
T 4f80_A 160 NIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSC--TIRSSLLGLEKTA 207 (226)
T ss_dssp BCCCEECCCEECTTSCEEEEEEEEECC----CEEE--EEEETTTTEEEEE
T ss_pred EcCCCceEEEECCCCcEEEEEEEEechhcCcEEEE--EEEeCCCCeEEEE
Confidence 00 000 11233 34788998 6799998665443
No 35
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=8.4e-10 Score=73.63 Aligned_cols=70 Identities=11% Similarity=0.135 Sum_probs=52.9
Q ss_pred CCCCeEEEEEEecC--CCCcceEEEEEEECCCCCCC------cceE---EecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 66 RLPNSYNITWMVSS--YTPLEEFKIKYRKIPGNEPS------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 66 ~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~~~------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
...+++.|.|..+. +.+|..|.|+|+......+. ...+ .|.+++.|+|||.|.|..|.|+++....+..
T Consensus 22 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T 101 (110)
T 2db8_A 22 THNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQT 101 (110)
T ss_dssp CSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEEEESCSCEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCC
T ss_pred cCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEEeCCcCEEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEc
Confidence 35799999999864 36899999999876433321 1233 4667999999999999999999998765544
Q ss_pred c
Q psy15979 135 K 135 (152)
Q Consensus 135 ~ 135 (152)
.
T Consensus 102 ~ 102 (110)
T 2db8_A 102 S 102 (110)
T ss_dssp C
T ss_pred C
Confidence 3
No 36
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.03 E-value=2.3e-09 Score=80.77 Aligned_cols=121 Identities=17% Similarity=0.247 Sum_probs=76.0
Q ss_pred ccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC---CCCCCeEEEEEEecC
Q psy15979 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSS 79 (152)
Q Consensus 3 l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~ 79 (152)
|..+.++.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.|.....| .+...+. ......+.|.|.+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p-~~~~~~~~~~~~~g~~v~l~C~~~g 218 (284)
T 2rik_A 140 IQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPP-VFRKKPHPVETLKGADVHLECELQG 218 (284)
T ss_dssp CCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCC-BCCSCCCCEEECTTCCEEEEEECBS
T ss_pred CcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCC-cceeCCCcceecCCCeEEEEEEEEe
Confidence 455667777666778899999999999999999999999998887665533222 1111111 123578999999887
Q ss_pred CCCcceEEEEEE--ECCCCCC-------CcceEEe-----cCCCeEEEEEEEEcCCCCCCCC
Q psy15979 80 YTPLEEFKIKYR--KIPGNEP-------SPMSNQL-----TGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 80 ~~pi~~y~~~~r--~~~~~~~-------~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.++ ..+.|... ....... ....+.| .+.+.|.| .|.|.+|....+
T Consensus 219 ~p~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~~ 277 (284)
T 2rik_A 219 TPP-FQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQC--KASNDVGSYTCV 277 (284)
T ss_dssp SSC-CEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEE--EEEETTEEEEEE
T ss_pred cCC-CEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEE--EEEeCCCceeEE
Confidence 654 34444321 1111100 0012233 33778988 679999976433
No 37
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.02 E-value=4.3e-09 Score=75.86 Aligned_cols=112 Identities=12% Similarity=0.075 Sum_probs=65.7
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceE----EEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHR----AYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~----~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
.....|.|.+++.+|+|.|+|.|.|..|... ..+.|...+.+|.+...+ .......+.|.|.+.+.+ ..+.|
T Consensus 55 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p--~~~~W 132 (196)
T 2d3v_A 55 KNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRF--DRFIL 132 (196)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSCC--SEEEE
T ss_pred ccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCC--CEEEE
Confidence 4578899999999999999999999987433 356666644444444322 122467899999987654 34444
Q ss_pred EEEECCCCC---------C-C--cceEEe-----cCCCeEEEEEEEEcCCC---CCCCCCCcc
Q psy15979 89 KYRKIPGNE---------P-S--PMSNQL-----TGTNQYQNRRLVRKRFD---RGNSTNGGL 131 (152)
Q Consensus 89 ~~r~~~~~~---------~-~--~~~~~L-----~~~~~Y~~rV~A~N~~G---~g~~s~~~~ 131 (152)
++....-. . . ...+.| ++.+.|.| .|.|..+ ++.+++...
T Consensus 133 -~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C--~a~n~~~~~~~s~~S~~~~ 192 (196)
T 2d3v_A 133 -TEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRC--YGSRRHILQVWSEPSDLLE 192 (196)
T ss_dssp -EEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEE--EEEETTEEEEECCCCCCEE
T ss_pred -EccCCcccccccccccccCCCceeEEEeeecCcccCeeEEE--EEEccCCCCccCCCCccEE
Confidence 33221110 0 0 123333 33889999 6788776 566665543
No 38
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.02 E-value=7.7e-09 Score=78.80 Aligned_cols=120 Identities=17% Similarity=0.250 Sum_probs=78.8
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC--------------------CCCceeec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK--------------------PNPAIFRS 61 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~--------------------P~p~~~~~ 61 (152)
+|..++++.+...+....|.|.+++.+|+|.|+|+|.|..|.....+.|.+. +.|.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 227 (317)
T 2y25_A 148 AIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGG 227 (317)
T ss_dssp BCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEB
T ss_pred ECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCccccc
Confidence 4666788988888888889999999999999999999999999988777532 12222221
Q ss_pred CCC---CCCCCeEEEEEEecCCCCcceEEEEEEECC---CCC-----C--C-cceEEe-----cCCCeEEEEEEEEcCCC
Q psy15979 62 HPQ---GRLPNSYNITWMVSSYTPLEEFKIKYRKIP---GNE-----P--S-PMSNQL-----TGTNQYQNRRLVRKRFD 122 (152)
Q Consensus 62 ~~~---~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~---~~~-----~--~-~~~~~L-----~~~~~Y~~rV~A~N~~G 122 (152)
.+. ......+.|.|.+.+.++. .+.| ++... ... . . ...+.| .+.+.|.| .|.|.+|
T Consensus 228 ~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W-~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~g 303 (317)
T 2y25_A 228 LPDVVTIQEGKALNLTCNVWGDPPP-EVSW-LKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGL--VVKNKYG 303 (317)
T ss_dssp CCSEEEEETTSBBCEEEEEECSSCC-EEEE-EESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEE--EEEETTE
T ss_pred CCccEEEEcCCEEEEEEEEecCCCC-EEEE-EECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEE--EEEeCCC
Confidence 111 1235788999998766443 3444 33211 110 0 1 013333 33778988 7799999
Q ss_pred CCC
Q psy15979 123 RGN 125 (152)
Q Consensus 123 ~g~ 125 (152)
...
T Consensus 304 ~~~ 306 (317)
T 2y25_A 304 SET 306 (317)
T ss_dssp EEE
T ss_pred eEE
Confidence 764
No 39
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.02 E-value=1.9e-09 Score=76.15 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=70.2
Q ss_pred ccCCCcEEEEEcCC--EeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeecCCC---CCCCCeEEEE
Q psy15979 3 LETTERRIMETRGS--RHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHPQ---GRLPNSYNIT 74 (152)
Q Consensus 3 l~~~~r~~i~~~~~--~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~~~~---~~~~~~~~L~ 74 (152)
|..+.++.+...+. .+.|.|.+++.+|+|.|+|.|.|..|.... .+.|..+|. +...+. ......+.|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~---~~~~~~~~~~~~g~~~~l~ 119 (182)
T 1rhf_A 43 VQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPF---FTVEPKDLAVPPNAPFQLS 119 (182)
T ss_dssp CCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCE---EEECCCCEEECTTCCEEEE
T ss_pred cCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCe---EEecCcceEecCCCEEEEE
Confidence 34444555543322 478999999999999999999999886442 445544432 221111 1235789999
Q ss_pred EEecCCCCcceEEEEEEECCCCCC--CcceE---EecCCCeEEEEEEEEcCCCCCC
Q psy15979 75 WMVSSYTPLEEFKIKYRKIPGNEP--SPMSN---QLTGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 75 W~~~~~~pi~~y~~~~r~~~~~~~--~~~~~---~L~~~~~Y~~rV~A~N~~G~g~ 125 (152)
|.+.+.++...+.|.......... ....+ .+++.+.|.| .|.|.+|...
T Consensus 120 C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~~d~G~Y~C--~a~N~~g~~~ 173 (182)
T 1rhf_A 120 CEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTMFSC--EAHNLKGLAS 173 (182)
T ss_dssp EEEECSSSCCEEEEEETTEECSCSEESSEEEEECCCSSCEEEEE--EEEETTEEEE
T ss_pred eEecCCCCCCEEEEEcCCeECCCCCCCceEEEEeccccCeEEEE--EEECCCCCcc
Confidence 998776543245553311100111 11222 3455789988 6789999764
No 40
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.02 E-value=2.7e-09 Score=77.52 Aligned_cols=119 Identities=18% Similarity=0.172 Sum_probs=73.5
Q ss_pred CCCcEEEEE-cCCEeEEEEceeCC-CCCEEEEEEEEcCCCc-eEEEEEE--ecCC----CCceeecCCCC---CCCCeEE
Q psy15979 5 TTERRIMET-RGSRHTLMIRKVVA-SDFGNYSCEATNPMGK-HRAYLEL--SGKP----NPAIFRSHPQG---RLPNSYN 72 (152)
Q Consensus 5 ~~~r~~i~~-~~~~~~L~I~~v~~-~D~G~YtC~A~N~~G~-~~~~~~v--~~~P----~p~~~~~~~~~---~~~~~~~ 72 (152)
.+.|+.+.. .+....|.|.+++. +|+|.|+|.|.|..|. ....+.| ...+ .+|.+...+.. .....+.
T Consensus 50 ~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~ 129 (212)
T 2yd1_A 50 TQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVL 129 (212)
T ss_dssp TSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEE
T ss_pred CcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEE
Confidence 457777764 34458999999999 9999999999999998 5554444 3332 12343332211 1357889
Q ss_pred EEEEecCCCCcceEEEEEEEC---CCCCCC----cceEEe-----cCCCeEEEEEEEEcCCCCCCCC
Q psy15979 73 ITWMVSSYTPLEEFKIKYRKI---PGNEPS----PMSNQL-----TGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 73 L~W~~~~~~pi~~y~~~~r~~---~~~~~~----~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
|.|.+.+.++. .+.| ++.. ...... ...+.| .+.+.|.| .|.|.+|....+
T Consensus 130 l~C~~~g~p~p-~i~W-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~s~ 192 (212)
T 2yd1_A 130 MTCKAIGNPTP-NIYW-IKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYEC--VAENSMGTEHSK 192 (212)
T ss_dssp ECCEEECSSCC-EEEE-EETTEECCTTSTTEEEETTEEEECSCCGGGCEEEEE--EEEETTEEEECC
T ss_pred EEEEeccCCCC-eEEE-EECCeEcccCCCeEEccCCeEEEccCChhhCEEEEE--EeecCCCceeEE
Confidence 99998766443 3444 3321 111100 123333 33778888 779999987654
No 41
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.01 E-value=5.4e-09 Score=78.68 Aligned_cols=120 Identities=15% Similarity=0.184 Sum_probs=75.2
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC---CCCCCCeEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMVS 78 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~---~~~~~~~~~L~W~~~ 78 (152)
+|..+.++.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.|.....|....... .......+.|.|.+.
T Consensus 45 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~ 124 (284)
T 2rik_A 45 EIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIG 124 (284)
T ss_dssp ECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEE
T ss_pred ECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEe
Confidence 35567788877667788999999999999999999999999987766655432222221111 012357789999987
Q ss_pred CCCCcceEEEEEEEC---CCCC-------CCcceEEe-----cCCCeEEEEEEEEcCCCCCC
Q psy15979 79 SYTPLEEFKIKYRKI---PGNE-------PSPMSNQL-----TGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 79 ~~~pi~~y~~~~r~~---~~~~-------~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~ 125 (152)
+.++ ..+.| ++.. .... .....+.| .+.+.|.| .|.|..|...
T Consensus 125 g~p~-~~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~ 182 (284)
T 2rik_A 125 GSPE-IKVLW-YKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTC--EAHNAAGSAS 182 (284)
T ss_dssp SSSC-CEEEE-EETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEE--EEECSSCEEE
T ss_pred eeCC-CEEEE-EECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEE--EEEcCCCcee
Confidence 6533 33444 3321 1110 00112333 33788988 5688888653
No 42
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.01 E-value=1.2e-09 Score=73.75 Aligned_cols=73 Identities=22% Similarity=0.331 Sum_probs=49.8
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEec--CCCCcceEEEEEEECC-CCCCC------------------c-ceE---Eec
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKYRKIP-GNEPS------------------P-MSN---QLT 106 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~--~~~pi~~y~~~~r~~~-~~~~~------------------~-~~~---~L~ 106 (152)
.+|.||.+. ....+++.|+|..+ ++.+|..|.|+|+... ...+. . ..+ .|.
T Consensus 4 ~pP~~P~v~----~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~ 79 (115)
T 2ic2_A 4 YPPTPPNVT----RLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLK 79 (115)
T ss_dssp CCCCCCEEE----ECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCC
T ss_pred CCCCcCEeE----EEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCC
Confidence 357777632 24578999999974 4479999999999872 22221 0 133 356
Q ss_pred CCCeEEEEEEEEcCCCCCCCCC
Q psy15979 107 GTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 107 ~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
+++.|+|||.|.|.+|.|.++.
T Consensus 80 p~t~Y~FRV~A~N~~G~~~pS~ 101 (115)
T 2ic2_A 80 PQHTYRFRILAVYSNNDNKESN 101 (115)
T ss_dssp SSEEEEEEEEEEETTSCEEECC
T ss_pred CCCEEEEEEEEEeCCCCCCCCC
Confidence 6999999999999999987764
No 43
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.00 E-value=6.7e-10 Score=80.10 Aligned_cols=118 Identities=12% Similarity=0.065 Sum_probs=72.3
Q ss_pred CCCcEEEEEcC---CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecCCCCCCCCeEEEEEEecC
Q psy15979 5 TTERRIMETRG---SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVSS 79 (152)
Q Consensus 5 ~~~r~~i~~~~---~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~~ 79 (152)
..+|+.+..+. ...+|.|.+++.+|+|.|+|.|.|..|.....+.|. ..|.+|...... ......+.|.|.+.+
T Consensus 51 ~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~g~~v~l~C~~~g 129 (202)
T 3bp6_B 51 QSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILE-VPGTGEVQLTCQARG 129 (202)
T ss_dssp BCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEEEEE-CTTTCCEEEEEEEEE
T ss_pred cCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEecCCCCcccEEEEe-cCCCCeEEEEEEccc
Confidence 34566665321 457899999999999999999999999777765554 444444333211 124678999999876
Q ss_pred CCCcceEEEEEEECCCC-------CCCc----ceEE--ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 80 YTPLEEFKIKYRKIPGN-------EPSP----MSNQ--LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 80 ~~pi~~y~~~~r~~~~~-------~~~~----~~~~--L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
++. ..+.| ++..... ..+. .... ..+.+.|.| .|.|.+|....+
T Consensus 130 ~P~-p~v~W-~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~d~G~Y~C--~a~N~~g~~~~~ 186 (202)
T 3bp6_B 130 YPL-AEVSW-QNVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRNFSC--MFWNAHMKELTS 186 (202)
T ss_dssp BSC-CEEEE-TTCCSCCEEEEEECTTSCEEEEEEEEECCCTTCCEEE--EEEETTTTEEEE
T ss_pred cCC-ceEEE-EeCCCCccCceeeCCCCCEEEEEEEEEEcCCCCEEEE--EEEcCCcccccE
Confidence 533 33333 2211100 0010 1112 334889999 779999965433
No 44
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.00 E-value=2.2e-09 Score=77.79 Aligned_cols=111 Identities=11% Similarity=0.133 Sum_probs=68.8
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecCCC-CCCCC-eEEEEEEecCCCC
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQ-GRLPN-SYNITWMVSSYTP 82 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~~~-~~~~~-~~~L~W~~~~~~p 82 (152)
+|+.+. .+.+|.|.+++.+|+|.|+|.|.|..|.....+.|. ..|..|.+..... ..... .+.|.|.+.+..|
T Consensus 62 ~R~~~~---~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p 138 (193)
T 2if7_A 62 KRLNFT---QSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADD 138 (193)
T ss_dssp TTEEEC---TTCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCT
T ss_pred ccEEEC---CCeEEEECCCCcccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCC
Confidence 366664 246899999999999999999999999766654444 4444344433221 11233 7999999987544
Q ss_pred cceEEEEEEECCCC--CCCcceEE--ec--CCCeEEEEEEEEcCCCCC
Q psy15979 83 LEEFKIKYRKIPGN--EPSPMSNQ--LT--GTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 83 i~~y~~~~r~~~~~--~~~~~~~~--L~--~~~~Y~~rV~A~N~~G~g 124 (152)
...+.|. + .+.. ........ .. +.+.|.| .|.|.+|..
T Consensus 139 ~p~i~W~-~-~g~~l~~~~~l~i~~~~~~~d~G~Y~C--~a~N~~g~~ 182 (193)
T 2if7_A 139 NVSFRWE-A-LGNTLSSQPNLTVSWDPRISSEQDYTC--IAENAVSNL 182 (193)
T ss_dssp TCEEEEE-E-TTEEEESSSEEEEEECTTTCSCCEEEE--EEEETTEEE
T ss_pred ceEEEEE-e-CCEEcCCCCeEEEEeccCcCCCCcEEE--EEECCCCcc
Confidence 4455553 2 2110 01112221 22 3789999 779999875
No 45
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.00 E-value=1.6e-09 Score=77.76 Aligned_cols=118 Identities=15% Similarity=0.194 Sum_probs=69.3
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE----EEEEecCCCCceeecCCCCCCCCeEEEEEEe-cCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA----YLELSGKPNPAIFRSHPQGRLPNSYNITWMV-SSY 80 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~----~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~-~~~ 80 (152)
..|+.+.. ..|.|.+++.+|+|.|+|.|.|..|.... .+.|..+|..+.............+.|.|.+ .+.
T Consensus 60 ~~r~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 135 (209)
T 1nbq_A 60 EDRVTFLP----TGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGS 135 (209)
T ss_dssp TTTCEEET----TEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCB
T ss_pred cCceEeec----cEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCC
Confidence 35666642 68999999999999999999998773322 3444455543322211111235778899986 554
Q ss_pred CCcceEEEEEEECCC-CC-C---------------CcceEEec-----CCCeEEEEEEEEcCCCCCCCCCCcc
Q psy15979 81 TPLEEFKIKYRKIPG-NE-P---------------SPMSNQLT-----GTNQYQNRRLVRKRFDRGNSTNGGL 131 (152)
Q Consensus 81 ~pi~~y~~~~r~~~~-~~-~---------------~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s~~~~ 131 (152)
++ ..+.|. +.... .. . ....+.|. +.+.|.| .|.|.+|....+....
T Consensus 136 p~-~~v~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~~s~~v~ 204 (209)
T 1nbq_A 136 PP-SEYTWF-KDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSC--EARNGYGTPMTSNAVR 204 (209)
T ss_dssp SC-CEEEEE-ETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEE--EEECSSSCCEECCCBC
T ss_pred CC-ceeEEE-ECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEE--EEeCCcCcccccccEE
Confidence 33 345543 32110 00 0 11233333 3788988 6799999875444443
No 46
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.00 E-value=6.4e-09 Score=74.42 Aligned_cols=110 Identities=13% Similarity=0.099 Sum_probs=67.4
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCce----EEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKH----RAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKIK 89 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~----~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y~~~ 89 (152)
....|.|.+++.+|+|.|+|.|.|..|.. ...+.|.+.+.+|.+...+ .......+.|.|...+..+ .|.|
T Consensus 50 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~--~~~w- 126 (184)
T 2gi7_A 50 DQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFD--QFAL- 126 (184)
T ss_dssp SSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCCC--EEEE-
T ss_pred cccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCCc--EEEE-
Confidence 34689999999999999999999988742 2345565544444443222 1224689999999765432 4544
Q ss_pred EEECCCCCCC--------c---ceEEecCCCeEEEEEEEEcCCC---CCCCCCCc
Q psy15979 90 YRKIPGNEPS--------P---MSNQLTGTNQYQNRRLVRKRFD---RGNSTNGG 130 (152)
Q Consensus 90 ~r~~~~~~~~--------~---~~~~L~~~~~Y~~rV~A~N~~G---~g~~s~~~ 130 (152)
++....-... . .....++.+.|.| .|.|..+ ++++++..
T Consensus 127 ~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C--~a~n~~~~~~~s~~S~~~ 179 (184)
T 2gi7_A 127 YKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRC--YSFSSRDPYLWSAPSDPL 179 (184)
T ss_dssp EECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEE--EEECTTSTTBCCCCCCCE
T ss_pred EECCCcCcceecCCCceEEEEEccCCccCCeEEEE--EEEeCCCCcccCCCCCcE
Confidence 4432211100 0 1123445889999 7788864 45555544
No 47
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.99 E-value=7.7e-09 Score=79.55 Aligned_cols=111 Identities=23% Similarity=0.206 Sum_probs=77.6
Q ss_pred eEEEEcee-CCCCCEEEEEEEEcCCCceEE-EEEEe----cCCCCceeecC-CCCCCCCeEEEEEEecC--CCCcceEEE
Q psy15979 18 HTLMIRKV-VASDFGNYSCEATNPMGKHRA-YLELS----GKPNPAIFRSH-PQGRLPNSYNITWMVSS--YTPLEEFKI 88 (152)
Q Consensus 18 ~~L~I~~v-~~~D~G~YtC~A~N~~G~~~~-~~~v~----~~P~p~~~~~~-~~~~~~~~~~L~W~~~~--~~pi~~y~~ 88 (152)
..+.|.++ .+...-.+.|.|.|.+|.... .+.+. .+|.||..... ......+++.|+|..+. +.++..|.+
T Consensus 158 ~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v 237 (303)
T 1i1r_A 158 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 237 (303)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEE
T ss_pred eEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEE
Confidence 46778888 666666777999999998764 22222 35666654321 12235689999999753 357899999
Q ss_pred EEEECCCCCCC----------cceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 89 KYRKIPGNEPS----------PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 89 ~~r~~~~~~~~----------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
+|+......+. ...+. |.+++.|+|||.|.|..|.|.+|+
T Consensus 238 ~y~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~ 290 (303)
T 1i1r_A 238 QYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 290 (303)
T ss_dssp EEEETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCC
T ss_pred EEEeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCC
Confidence 99987643221 13454 455999999999999999887764
No 48
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.99 E-value=2.3e-09 Score=76.07 Aligned_cols=116 Identities=21% Similarity=0.277 Sum_probs=71.3
Q ss_pred ccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC-CCCCCCeEEEEEEecCCC
Q psy15979 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYT 81 (152)
Q Consensus 3 l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~-~~~~~~~~~L~W~~~~~~ 81 (152)
|..++++.+. +....|.|.+++.+|+|.|+|.|.|..|.....+.|.....|....... .......+.|.|.+.+.+
T Consensus 45 ~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p 122 (192)
T 2va4_A 45 IEENEKYILK--GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEP 122 (192)
T ss_dssp CCCSSSEEEE--TTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEES
T ss_pred cCCCccEEEe--CCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCcccccCcceEEeCCeEEEEEEecCCC
Confidence 4556677765 3456899999999999999999999999888765555432222211111 112367899999987664
Q ss_pred CcceEEEEEEECC-----CCC---CC---------cceEEec-----CCCeEEEEEEEEcCCCCC
Q psy15979 82 PLEEFKIKYRKIP-----GNE---PS---------PMSNQLT-----GTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 82 pi~~y~~~~r~~~-----~~~---~~---------~~~~~L~-----~~~~Y~~rV~A~N~~G~g 124 (152)
+. .+.| ++... ... .. ...+.|. +.+.|.| .|.|.+|..
T Consensus 123 ~~-~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~ 183 (192)
T 2va4_A 123 IP-EITW-KRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC--EAASRIGGH 183 (192)
T ss_dssp CC-EEEE-EETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEE--EEECSSCEE
T ss_pred CC-cEEE-EeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEE--EEEecCCce
Confidence 33 3444 33210 000 00 0123333 3788988 679999874
No 49
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.99 E-value=1.6e-09 Score=71.77 Aligned_cols=69 Identities=14% Similarity=0.240 Sum_probs=51.8
Q ss_pred CCCCeEEEEEEec---CCCCcceEEEEEEECCCCCCC------cceE---EecCCCeEEEEEEEEcCCCCCCCCCCcccc
Q psy15979 66 RLPNSYNITWMVS---SYTPLEEFKIKYRKIPGNEPS------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIV 133 (152)
Q Consensus 66 ~~~~~~~L~W~~~---~~~pi~~y~~~~r~~~~~~~~------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~ 133 (152)
...+++.|.|..+ ++.+|..|.|+|+......+. ...+ .|.+++.|+|||.|.|..|.|.++....+.
T Consensus 21 ~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~ 100 (110)
T 2crz_A 21 PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDIT 100 (110)
T ss_dssp CCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEE
T ss_pred cCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccc
Confidence 3468999999754 357899999999876544322 1233 466699999999999999999998766554
Q ss_pred c
Q psy15979 134 P 134 (152)
Q Consensus 134 ~ 134 (152)
+
T Consensus 101 T 101 (110)
T 2crz_A 101 T 101 (110)
T ss_dssp C
T ss_pred c
Confidence 4
No 50
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.98 E-value=1.1e-09 Score=76.51 Aligned_cols=48 Identities=25% Similarity=0.369 Sum_probs=42.5
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
.+.|+.+...+..+.|.|.+++.+|+|.|+|+|.|.+|.+...+.|.+
T Consensus 90 ~~~r~~i~~~~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 90 TEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp CSSSCEEEEETTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCeEEEEeCCCEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 557888887777889999999999999999999999999998877753
No 51
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.97 E-value=1.1e-08 Score=85.97 Aligned_cols=122 Identities=14% Similarity=0.175 Sum_probs=76.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeecCC-CCCCCCeEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHP-QGRLPNSYNITWMV 77 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~~~-~~~~~~~~~L~W~~ 77 (152)
+|..+.|+.+... ++.|.|.+++.+|+|.|+|.|.|..|...+ .+.|...|..+...... .......+.|.|.+
T Consensus 328 ~l~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 405 (642)
T 1e07_A 328 SLPVSPRLQLSND--NRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHA 405 (642)
T ss_pred cCCCcCCEEEeCC--CCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEc
Confidence 4556677777533 468999999999999999999999997543 34555455433222111 11246789999998
Q ss_pred cCCCCcceEEEEEEECCCCCCCcceEEe-----cCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 78 SSYTPLEEFKIKYRKIPGNEPSPMSNQL-----TGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 78 ~~~~pi~~y~~~~r~~~~~~~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
.+.++. .+.|.. . +..-.....+.| .+.+.|.| .|.|.+|....+...
T Consensus 406 ~g~p~~-~i~W~~-~-g~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~~s~~~ 458 (642)
T 1e07_A 406 ASNPPA-QYSWLI-D-GNIQQHTQELFISNITEKNSGLYTC--QANNSASGHSRTTVK 458 (642)
T ss_pred CccCCC-eEEEEE-C-CEEcCCCceEEEccCChhhCeEEEE--EEEcCCCCCcccceE
Confidence 775443 455532 2 111111222333 34778877 789999987766543
No 52
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.97 E-value=1e-08 Score=73.62 Aligned_cols=113 Identities=10% Similarity=0.002 Sum_probs=68.5
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCce----EEEEEEecCCCCceeecCCC--CCCCCeEEEEEEecCCCCcceEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKH----RAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~----~~~~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
.....|.|.+++.+|+|.|+|.|.|..|.. ...+.|.+.+.+|.+...+. ......+.|.|.+.+..+ .|.|
T Consensus 54 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~--~~~w 131 (188)
T 1oll_A 54 INKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATS--MFLL 131 (188)
T ss_dssp CCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSSSCS--EEEE
T ss_pred cceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCCCCC--EEEE
Confidence 356789999999999999999999976532 33556655443444433221 124689999999765433 4444
Q ss_pred EEEECCCCC------CCcceEE-----ecCCCeEEEEEEEEcC-CCCCCCCCCccc
Q psy15979 89 KYRKIPGNE------PSPMSNQ-----LTGTNQYQNRRLVRKR-FDRGNSTNGGLI 132 (152)
Q Consensus 89 ~~r~~~~~~------~~~~~~~-----L~~~~~Y~~rV~A~N~-~G~g~~s~~~~~ 132 (152)
++....-. .....+. .++.+.|.|. |.|. .+++.+|+...+
T Consensus 132 -~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~--a~n~~~~~s~~S~~~~l 184 (188)
T 1oll_A 132 -LKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCF--GSYNNHAWSFPSEPVKL 184 (188)
T ss_dssp -EEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEE--CEEETTEECCCCCCEEE
T ss_pred -EECCccccccccCCCceeEEEECCCCcCCCcEEEEE--EEcCCCcCCCCCCcEEE
Confidence 44432110 1112222 3448999995 4554 456777765544
No 53
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.97 E-value=4.3e-09 Score=82.14 Aligned_cols=106 Identities=21% Similarity=0.230 Sum_probs=70.7
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEE--EEEEecCCCCceeecCCCCCCCCeEEEEEEecCC-CCcceEEEEEEEC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY-TPLEEFKIKYRKI 93 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~-~pi~~y~~~~r~~ 93 (152)
.+.|.|.+++.+|+|+|+|.+ .|...+ .+.|..+|.+|.+.-. ......++.+.|..+.. .+...|.++|+..
T Consensus 59 ~~~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~L~V~~pP~~P~l~c~-~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~ 134 (325)
T 1n26_A 59 GRRLLLRSVQLHDSGNYSCYR---AGRPAGTVHLLVDVPPEEPQLSCF-RKSPLSNVVCEWGPRSTPSLTTKAVLLVRKF 134 (325)
T ss_dssp SSEEEECSCCGGGCEEEEEES---SSSCSCEEEEEECCCCCCCCCEEE-BSSTTSCEEEEECCSSCCCTTCEEEEEEEEE
T ss_pred cceEEecccchhhCeEeEEEe---CCEEeeeEEEEeccCCCCCceeEE-eecCCCcEEEEECCCCCCCCCceEEEEEEEc
Confidence 357999999999999999993 565544 5566677776653211 01235689999997432 2446899998864
Q ss_pred C-CCC------------CCcceEEec----CCCeEEEEEEEEcCCCCCCC
Q psy15979 94 P-GNE------------PSPMSNQLT----GTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 94 ~-~~~------------~~~~~~~L~----~~~~Y~~rV~A~N~~G~g~~ 126 (152)
. ... ....+..+. +++.|+|+|.|.|.+|.+.+
T Consensus 135 ~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s 184 (325)
T 1n26_A 135 QNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFS 184 (325)
T ss_dssp SSSSCEEEEEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEEC
T ss_pred cCCCCCcccccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCccc
Confidence 2 110 011222333 46999999999999999753
No 54
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=3.9e-10 Score=76.11 Aligned_cols=92 Identities=14% Similarity=0.172 Sum_probs=61.5
Q ss_pred CCceEEEEEE--ecCCCCceeecCCCCCCCCeEEEEEEecC---CCCcceEEEEEEECCCCCCC-------cceE---Ee
Q psy15979 41 MGKHRAYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVSS---YTPLEEFKIKYRKIPGNEPS-------PMSN---QL 105 (152)
Q Consensus 41 ~G~~~~~~~v--~~~P~p~~~~~~~~~~~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~~~~~-------~~~~---~L 105 (152)
.|.+...+.| ...|.||..... .....+++.|.|..+. +.+|..|.++|+......+. ...+ .|
T Consensus 3 ~G~~~~~~~v~~~~~P~~P~~l~~-~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~v~~L 81 (120)
T 2yux_A 3 SGSSGASIDIQIIDRPGPPQIVKI-EDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITEL 81 (120)
T ss_dssp CCCCCCCCCCCCCCCCCCCSCEEE-EEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESSCCSSCCEECCC
T ss_pred CCcccEEEEEEeecCCCcCCCCEE-EEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeecCCcCEEEECCC
Confidence 3555554333 456766643211 1234689999999753 36899999999987544321 1233 46
Q ss_pred cCCCeEEEEEEEEcCCCCCCCCC-Ccccc
Q psy15979 106 TGTNQYQNRRLVRKRFDRGNSTN-GGLIV 133 (152)
Q Consensus 106 ~~~~~Y~~rV~A~N~~G~g~~s~-~~~~~ 133 (152)
.+++.|+|||.|.|.+|.|+++. +..+.
T Consensus 82 ~p~t~Y~frV~A~n~~G~s~~S~~s~~~~ 110 (120)
T 2yux_A 82 VIGNEYYFRVFSENMCGLSEDATMTKESA 110 (120)
T ss_dssp CSSEEEEEEECCCSSSCSCSSCEECSSCE
T ss_pred CCCCEEEEEEEEeeCCcCCCCccCcCCce
Confidence 66999999999999999999987 44443
No 55
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=6.5e-09 Score=67.83 Aligned_cols=83 Identities=20% Similarity=0.270 Sum_probs=58.9
Q ss_pred ecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCC-C------CcceE---EecCCCeEEEEEEEEcC
Q psy15979 51 SGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE-P------SPMSN---QLTGTNQYQNRRLVRKR 120 (152)
Q Consensus 51 ~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~-~------~~~~~---~L~~~~~Y~~rV~A~N~ 120 (152)
...|.+|..... .....+++.|.|......++..|.|+|+...... + ....+ .|.+++.|+|||.|.|.
T Consensus 5 ~~~P~~P~~~~~-~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 83 (106)
T 2dju_A 5 SSGPKPPIDLVV-TETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNS 83 (106)
T ss_dssp CCSCCCCEEEEE-EEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECS
T ss_pred CcCCcCCCCcEE-EeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeC
Confidence 356666543321 1224689999999876678999999998876431 1 12334 46669999999999999
Q ss_pred CCCCCCCCCccccc
Q psy15979 121 FDRGNSTNGGLIVP 134 (152)
Q Consensus 121 ~G~g~~s~~~~~~~ 134 (152)
.|.|.++....+..
T Consensus 84 ~G~~~~S~~~~~~T 97 (106)
T 2dju_A 84 IGRGPPSEAVRART 97 (106)
T ss_dssp SCBCCCCCCEEEEC
T ss_pred CccCCCcccEEeEc
Confidence 99999987665433
No 56
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.96 E-value=3.2e-09 Score=83.34 Aligned_cols=105 Identities=17% Similarity=0.167 Sum_probs=66.2
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceEEEEEEECCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~ 95 (152)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|.....|....... .......+.|.|.+.+.++. .+.|. +....
T Consensus 270 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W~-~~g~~ 347 (388)
T 2v5m_A 270 GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIK-TVSWM-KDGKA 347 (388)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCC-EEEEE-ETTEE
T ss_pred CEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCC-eEEEE-ECCEE
Confidence 4899999999999999999999999988766655332221111110 11235789999998766443 45543 32110
Q ss_pred CCCCcceEEe-----cCCCeEEEEEEEEcCCCCCCC
Q psy15979 96 NEPSPMSNQL-----TGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 96 ~~~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
-......+.| .+.+.|.| .|.|.+|....
T Consensus 348 i~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~ 381 (388)
T 2v5m_A 348 IGHSESVLRIESVKKEDKGMYQC--FVRNDRESAEA 381 (388)
T ss_dssp CSCCSSEEEESSCCGGGCEEEEE--EEECSSCEEEE
T ss_pred CccCCCEEEEecCChhhCEEEEE--EEEcCCCcEEE
Confidence 0112233433 34889988 77999997643
No 57
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=98.96 E-value=4.5e-09 Score=78.78 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=72.7
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEe----cCCCCceeecCCCCCCCCeEEEEEEecC--CCCcceEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELS----GKPNPAIFRSHPQGRLPNSYNITWMVSS--YTPLEEFK 87 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~----~~P~p~~~~~~~~~~~~~~~~L~W~~~~--~~pi~~y~ 87 (152)
....++|.++.+.-.-.+...|.|.+|....+ +.+. .+|.|+.... .....+++.|.|..+. +.+|..|.
T Consensus 44 ~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~~--~~~~~~sv~l~W~~P~~~~G~i~~Y~ 121 (232)
T 4go6_B 44 DYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIK--ISKSPDGAHLTWEPPSVTSGKIIEYS 121 (232)
T ss_dssp -----CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEEE--EEEETTEEEEEEECCSCCSSCCCEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeeeE--EecCCCEEEEEEeCCCCCCCceeeEE
Confidence 34568899999988888899999999987652 2222 2233333322 1234689999999753 35899999
Q ss_pred EEEEECCCCCCC---------------------c----------ceEEecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 88 IKYRKIPGNEPS---------------------P----------MSNQLTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 88 ~~~r~~~~~~~~---------------------~----------~~~~L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
|+|+........ . ....|.+++.|+|||.|.|..|.|.+|.
T Consensus 122 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~ 193 (232)
T 4go6_B 122 VYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQ 193 (232)
T ss_dssp EEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCEE
T ss_pred EEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCCceEEEEEEECCCcCCCCcc
Confidence 999876433200 0 0124667899999999999999998774
No 58
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.95 E-value=4.6e-09 Score=87.06 Aligned_cols=118 Identities=14% Similarity=0.084 Sum_probs=71.8
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCC-
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSY- 80 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~- 80 (152)
+.|+.+... ....+|.|.+++.+|+|.|+|+| |..|.....+.|.....||.+.... .......+.|.|.+.+.
T Consensus 392 ~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~ 470 (585)
T 2ocw_A 392 EGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKF 470 (585)
T ss_pred CCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCC
Confidence 457777643 22345999999999999999999 9999888877766543333332211 11236789999988632
Q ss_pred --CCcceEEEEEEECCC----CC-C-----------C-cceEEe-----cCCCeEEEEEEEEcCCCCCCCC
Q psy15979 81 --TPLEEFKIKYRKIPG----NE-P-----------S-PMSNQL-----TGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 81 --~pi~~y~~~~r~~~~----~~-~-----------~-~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.|...+.| ++.... .. . . ...+.| ++.+.|.| .|.|.+|.++..
T Consensus 471 ~~~p~~~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~~ 538 (585)
T 2ocw_A 471 SSYEKYWCKW-NNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWC--GVKQGHFYGETA 538 (585)
T ss_pred CCCccEEEEE-eecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEE--EeEeCCCccEEE
Confidence 23333333 322100 00 0 0 012333 33789988 779999987754
No 59
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.95 E-value=1e-09 Score=72.53 Aligned_cols=52 Identities=37% Similarity=0.404 Sum_probs=45.2
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
+|..+.|+.+...+..+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.+.
T Consensus 54 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 54 VLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEEC
T ss_pred ECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 4667789999877778899999999999999999999999998888777643
No 60
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.95 E-value=5.1e-09 Score=75.51 Aligned_cols=112 Identities=9% Similarity=0.059 Sum_probs=67.7
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCC-Cc----eEEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPM-GK----HRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~-G~----~~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
....|.|.+++.+|+|.|+|.|.|.. |. ....+.|...|.+|.+...+ .......+.|.|.+.+..+ .+.|
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~--~v~W 133 (198)
T 1ugn_A 56 KKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFD--GFIL 133 (198)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCCS--EEEE
T ss_pred cccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCCCc--EEEE
Confidence 34689999999999999999999988 62 23456666644444433222 1124678999999877632 4444
Q ss_pred EEEECCCCC---------C-C--cceEEe-----cCCCeEEEEEEEEcCCC---CCCCCCCccc
Q psy15979 89 KYRKIPGNE---------P-S--PMSNQL-----TGTNQYQNRRLVRKRFD---RGNSTNGGLI 132 (152)
Q Consensus 89 ~~r~~~~~~---------~-~--~~~~~L-----~~~~~Y~~rV~A~N~~G---~g~~s~~~~~ 132 (152)
++....-. . . ...+.| ++.+.|.| .|.|..+ ++.+++...+
T Consensus 134 -~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C--~a~n~~~~~~~s~~S~~~~l 194 (198)
T 1ugn_A 134 -CKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRC--YAYDSNSPYEWSLPSDLLEL 194 (198)
T ss_dssp -EEC------CEEEC------CCEEEEEECCCCTTSCEEEEE--EEECTTSTTEECCCCCCEEE
T ss_pred -EECCCccCCccccccccCCCcceeEEEecccCcccCeEEEE--EEEeCCCCccccCcCceEEE
Confidence 33221100 0 0 123333 34889998 7789876 5666655443
No 61
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.95 E-value=1.5e-09 Score=70.99 Aligned_cols=54 Identities=26% Similarity=0.410 Sum_probs=43.7
Q ss_pred cccCCC--cEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCc
Q psy15979 2 RLETTE--RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (152)
Q Consensus 2 ~l~~~~--r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~ 57 (152)
+|..+. ||.+..++....|.|.+++.+|+|.|+|+|.| +...+.+.|..+|.|+
T Consensus 46 ~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--~~~~~~l~V~~~p~p~ 101 (103)
T 1x44_A 46 EIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG--GQSSAKLSVDLKSGPS 101 (103)
T ss_dssp ECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT--EEEEEEEEEECCCSCC
T ss_pred ECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC--CcEEEEEEEeCCCCCC
Confidence 355555 88998888889999999999999999999999 5555667777777653
No 62
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=5.5e-10 Score=75.27 Aligned_cols=101 Identities=17% Similarity=0.144 Sum_probs=67.8
Q ss_pred EEEEEEcCCCceEEE--EEEe---cCCC-CceeecCCCCCCCCeEEEEEEecC----CCCcceEEEEEEECCCCCC----
Q psy15979 33 YSCEATNPMGKHRAY--LELS---GKPN-PAIFRSHPQGRLPNSYNITWMVSS----YTPLEEFKIKYRKIPGNEP---- 98 (152)
Q Consensus 33 YtC~A~N~~G~~~~~--~~v~---~~P~-p~~~~~~~~~~~~~~~~L~W~~~~----~~pi~~y~~~~r~~~~~~~---- 98 (152)
+++.|.|.+|....+ +.+. ..|. ||..... .....+++.|.|..+. +.++..|.++|+.......
T Consensus 2 ~~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~-~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~ 80 (124)
T 2ed9_A 2 SSGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSL-EVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETL 80 (124)
T ss_dssp CSCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCE-EEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEEE
T ss_pred CeEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEE-EEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEEe
Confidence 467889999976543 2221 3343 4422110 1224689999999863 4578999999998754331
Q ss_pred --CcceE---EecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 99 --SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 99 --~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
....+ .|.+++.|.|+|.|.|..|.|.++....+.+
T Consensus 81 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 121 (124)
T 2ed9_A 81 EPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAET 121 (124)
T ss_dssp CSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEEC
T ss_pred cCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEEC
Confidence 11233 4666999999999999999999998766544
No 63
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.95 E-value=2.9e-09 Score=77.21 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE--E--EEEecCCCCceeecCCCCCCCCeEEEEEEecCC
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--Y--LELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY 80 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~--~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~ 80 (152)
.++|+.+..+ ++|.|.+++.+|+|.|+|.|.|..|.... . +.|...+.+|.+... ...+.|.|.+.+.
T Consensus 56 ~~~R~~~~~n---gsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~-----~~~v~L~C~~~~~ 127 (182)
T 1hnf_A 56 EKDTYKLFKN---GTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWT-----CINTTLTCEVMNG 127 (182)
T ss_dssp SCTTEEECTT---SCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCCCCCEEEEE-----TTTTEEEEECSSC
T ss_pred CCCeEEECCC---CCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEEc-----cCcEEEEeEccCC
Confidence 4678888633 38999999999999999999999998643 3 444444333333321 2257889988765
Q ss_pred CCcceEEEEEEECCCCC--CCcceEE--ecCCCeEEEEEEEEcCCCCCCC
Q psy15979 81 TPLEEFKIKYRKIPGNE--PSPMSNQ--LTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 81 ~pi~~y~~~~r~~~~~~--~~~~~~~--L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
++ ..|.|. +.-..-. .....+. ..+.+.|.| .|.|.+|....
T Consensus 128 p~-~~~~W~-~~g~~l~~~~~~i~~~~~~~d~G~Y~C--~a~N~~~~~~s 173 (182)
T 1hnf_A 128 TD-PELNLY-QDGKHLKLSQRVITHKWTTSLSAKFKC--TAGNKVSKESS 173 (182)
T ss_dssp SS-CEEEEE-ESSCEEEEESSCEEEECCSCEEEEEEE--EEECSSCEEEE
T ss_pred CC-CEEEEE-ECCEECCCCCcEEEEecccCCCcEEEE--EEEeCCCCcEE
Confidence 43 345553 2210000 0112223 244889998 78999987643
No 64
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.94 E-value=3.4e-08 Score=74.20 Aligned_cols=85 Identities=13% Similarity=0.174 Sum_probs=53.9
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCC-------ce----EEEEEEecCC------------CCceee
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-------KH----RAYLELSGKP------------NPAIFR 60 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-------~~----~~~~~v~~~P------------~p~~~~ 60 (152)
++|+.+..+ +...+|.|.+++.+|+|.|+|.|.|..| .. ...+.|...| .++.+.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 143 (257)
T 1f3r_B 64 KSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLT 143 (257)
T ss_dssp STTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSC
T ss_pred CCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEE
Confidence 468888653 5677999999999999999999999975 11 1235554433 112121
Q ss_pred cCC---CCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 61 SHP---QGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 61 ~~~---~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
..+ .......+.|.|.+.+..+. ...||+.
T Consensus 144 ~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~ 176 (257)
T 1f3r_B 144 QSPSLLSASVGDRVTLSCKGSQNINN--YLAWYQQ 176 (257)
T ss_dssp EETSEECCCTTCCEEEEEECSSCCBT--CEEEEEE
T ss_pred ccCCEEEEcCCCCEEEEEEECCcCCC--cEEEEEE
Confidence 111 12246889999998765432 2345554
No 65
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=1.9e-09 Score=70.28 Aligned_cols=54 Identities=24% Similarity=0.404 Sum_probs=44.6
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCc
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~ 57 (152)
+|..+.|+.+..++....|.|.+++.+|+|.|+|.|.| ......+.|..+|.++
T Consensus 47 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n--~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 47 AIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA--SKSTASLHVEEKASGP 100 (103)
T ss_dssp BCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS--CEEEEEEEECCCSSSS
T ss_pred EccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc--CCcEEEEEEeCCCCCC
Confidence 46677899998888888999999999999999999999 4555567777777654
No 66
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.94 E-value=1.5e-08 Score=72.86 Aligned_cols=114 Identities=12% Similarity=0.209 Sum_probs=69.7
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCC-CceEEEEE--EecCCCCceeecCCC-CCCCCeEEEEEEecCCCC
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM-GKHRAYLE--LSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTP 82 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~~~--v~~~P~p~~~~~~~~-~~~~~~~~L~W~~~~~~p 82 (152)
+|+.+.. +++|.|.+++.+|+|.|+|.+.|.. |.....+. |...|..+.+..... ......+.|.|.+.+.+|
T Consensus 63 ~r~~~~~---~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp 139 (208)
T 3r4d_A 63 GREIIYS---NGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGA 139 (208)
T ss_dssp SSEEECT---TSCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTC
T ss_pred ceeEEec---CCeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCC
Confidence 4555542 3479999999999999999999985 55545444 444444444433222 234678999999887543
Q ss_pred cceEEEEEE--ECCCCC-----CCcceEEec-----CCCeEEEEEEEEcCCCCCCCC
Q psy15979 83 LEEFKIKYR--KIPGNE-----PSPMSNQLT-----GTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 83 i~~y~~~~r--~~~~~~-----~~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.+.|... ...... .....+.|. +.+.|.| .|.|.+|...+.
T Consensus 140 --~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~g~~~s~ 192 (208)
T 3r4d_A 140 --NIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQC--EISNPVSVRRSN 192 (208)
T ss_dssp --EEEEEETTEECCCCSSEEEETTTTEEEESSCCGGGCEEEEE--EEECTTCCEECC
T ss_pred --ceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEE--EEecCCCcccCC
Confidence 4554331 111110 111233333 3789988 679999986544
No 67
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.94 E-value=1.6e-09 Score=70.39 Aligned_cols=50 Identities=24% Similarity=0.292 Sum_probs=43.6
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..+.++.+...+....|.|.+++.+|+|.|+|+|.|..|.+...+.|.
T Consensus 48 ~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~ 97 (103)
T 3qp3_A 48 ELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLD 97 (103)
T ss_dssp ECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEE
Confidence 45667889888877888999999999999999999999999998876654
No 68
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=98.94 E-value=6.8e-09 Score=68.38 Aligned_cols=65 Identities=11% Similarity=0.085 Sum_probs=50.0
Q ss_pred eEEEEEEecC---CCCcceEEEEEEECCCCCCC-----------cceE---EecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 70 SYNITWMVSS---YTPLEEFKIKYRKIPGNEPS-----------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 70 ~~~L~W~~~~---~~pi~~y~~~~r~~~~~~~~-----------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
++.|+|..+. +.||..|.++|+......+. ...+ .|.+++.|+|||.|.|..|.|.+|....+
T Consensus 21 ~v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~ 100 (105)
T 2haz_A 21 TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEF 100 (105)
T ss_dssp CEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEE
T ss_pred cEEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEee
Confidence 3999999753 34699999999987655331 1334 35669999999999999999999987765
Q ss_pred cc
Q psy15979 133 VP 134 (152)
Q Consensus 133 ~~ 134 (152)
.+
T Consensus 101 ~T 102 (105)
T 2haz_A 101 KT 102 (105)
T ss_dssp EC
T ss_pred EE
Confidence 44
No 69
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.94 E-value=2.9e-09 Score=89.99 Aligned_cols=77 Identities=18% Similarity=0.326 Sum_probs=57.4
Q ss_pred CCCCceeecCCCCCCCCeEEEEEEec---CCCCcceEEEEEEECCCCCCCc------ceE---EecCCCeEEEEEEEEcC
Q psy15979 53 KPNPAIFRSHPQGRLPNSYNITWMVS---SYTPLEEFKIKYRKIPGNEPSP------MSN---QLTGTNQYQNRRLVRKR 120 (152)
Q Consensus 53 ~P~p~~~~~~~~~~~~~~~~L~W~~~---~~~pi~~y~~~~r~~~~~~~~~------~~~---~L~~~~~Y~~rV~A~N~ 120 (152)
+|.||.... ....+.++++|+|..+ ++++|+.|.++++..+...|.. ..+ .|.+++.|+|||.|.|.
T Consensus 9 ~P~pP~~P~-v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~~~t~~~V~~L~~g~~Y~FRV~A~N~ 87 (573)
T 3uto_A 9 EPEPPRFPI-IENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAENK 87 (573)
T ss_dssp CCCCCEEEE-EEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEESSSEEEECCCCTTCEEEEEEEEEET
T ss_pred CCccCCCCE-EEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccccCCEEEeCCCCCCCcEeEEEEEEcC
Confidence 465554321 1134579999999974 5689999999999988776432 334 46669999999999999
Q ss_pred CCCCCCCCCc
Q psy15979 121 FDRGNSTNGG 130 (152)
Q Consensus 121 ~G~g~~s~~~ 130 (152)
+|+|+|+...
T Consensus 88 ~G~s~PS~~s 97 (573)
T 3uto_A 88 HGQSKPCEPT 97 (573)
T ss_dssp TEECCCCCCC
T ss_pred ceEcCCcCCC
Confidence 9999998643
No 70
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.93 E-value=8.5e-09 Score=74.61 Aligned_cols=116 Identities=10% Similarity=0.024 Sum_probs=67.5
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCc------eEEEEEEecCCCCceeecCCCCCCCCeEEEEEEe
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK------HRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMV 77 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~------~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~ 77 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..|. ....+.|...|.+|.+...........+.|.|.+
T Consensus 68 ~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~ 147 (214)
T 2zg1_A 68 QGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSL 147 (214)
T ss_dssp TTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEEC
T ss_pred cCceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEe
Confidence 367777532 24568999999999999999999998642 2345666666655544332222346789999998
Q ss_pred cCC---CCcceEEEEEEECCCC-C---CCcceEEecC-----CCeEEEEEEEEcCCCCC
Q psy15979 78 SSY---TPLEEFKIKYRKIPGN-E---PSPMSNQLTG-----TNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 78 ~~~---~pi~~y~~~~r~~~~~-~---~~~~~~~L~~-----~~~Y~~rV~A~N~~G~g 124 (152)
.+. .|...+.| ++..... . .....+.|.. ++.|.| .|.|..|..
T Consensus 148 ~~~~~~~p~p~v~W-~~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C--~a~n~~~~~ 203 (214)
T 2zg1_A 148 PGSCEAGPPLTFSW-TGNALSPLDPETTRSSELTLTPRPEDHGTNLTC--QMKRQGAQV 203 (214)
T ss_dssp TTCCSCSSCCEEEE-ESSTTSSSCSSCCCSSEEEECCCTTCCSCEEEE--EEECC----
T ss_pred ccCCCCCCCceEEE-eCCCCccCCCCceeEEEEEEecccHHcCcEEEE--EEEeCCCCc
Confidence 653 23334444 3322110 0 1112333333 679999 668876544
No 71
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=98.93 E-value=1.6e-08 Score=73.76 Aligned_cols=110 Identities=23% Similarity=0.201 Sum_probs=75.8
Q ss_pred eEEEEcee-CCCCCEEEEEEEEcCCCceEE-EEEEe----cCCCCceeecC-CCCCCCCeEEEEEEecC--CCCcceEEE
Q psy15979 18 HTLMIRKV-VASDFGNYSCEATNPMGKHRA-YLELS----GKPNPAIFRSH-PQGRLPNSYNITWMVSS--YTPLEEFKI 88 (152)
Q Consensus 18 ~~L~I~~v-~~~D~G~YtC~A~N~~G~~~~-~~~v~----~~P~p~~~~~~-~~~~~~~~~~L~W~~~~--~~pi~~y~~ 88 (152)
....|.++ .....-.+.+.|.|..|.... .+.+. .+|.||..... ......+++.|+|..+. +.++..|.|
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v 141 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 141 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEE
T ss_pred ceEEEcCCccccccEEEEEEEEecccCccCCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEE
Confidence 46778888 676777788999999998763 22221 35666654321 12225689999999753 347889999
Q ss_pred EEEECCCCCCC----------cceEE---ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 89 KYRKIPGNEPS----------PMSNQ---LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 89 ~~r~~~~~~~~----------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
+|+......+. ...+. |.+++.|+|||.|.|..|.|.+|
T Consensus 142 ~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S 193 (215)
T 1bqu_A 142 QYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWS 193 (215)
T ss_dssp EEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCC
T ss_pred EEccCCCCCceEeccccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccC
Confidence 99987543211 13444 55599999999999999987644
No 72
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.93 E-value=2.6e-09 Score=68.86 Aligned_cols=51 Identities=25% Similarity=0.455 Sum_probs=43.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..+.|+.+...+....|.|.+++.+|+|.|+|.|.|..|.+.+.+.|..
T Consensus 42 ~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 92 (97)
T 2bk8_A 42 QLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFV 92 (97)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEE
Confidence 356678898876667789999999999999999999999999998766653
No 73
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.92 E-value=1.2e-08 Score=73.91 Aligned_cols=84 Identities=17% Similarity=0.231 Sum_probs=57.1
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc-----eEEEEEEecCC-CCceeecCCCC---CCCCeEEEEE
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK-----HRAYLELSGKP-NPAIFRSHPQG---RLPNSYNITW 75 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~-----~~~~~~v~~~P-~p~~~~~~~~~---~~~~~~~L~W 75 (152)
.++|+.+...+...+|.|.+++.+|+|.|+|.|.|..|. ....+.|...| .+|.+...+.. .....+.|.|
T Consensus 57 ~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C 136 (213)
T 3mj8_L 57 IPDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVC 136 (213)
T ss_dssp SCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEE
T ss_pred ccCcEEEEecCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEE
Confidence 346888877778889999999999999999999999982 22345555444 44444332211 1368899999
Q ss_pred EecCCC-CcceEEE
Q psy15979 76 MVSSYT-PLEEFKI 88 (152)
Q Consensus 76 ~~~~~~-pi~~y~~ 88 (152)
.+.+.. +...+.|
T Consensus 137 ~~~g~~p~~~~v~W 150 (213)
T 3mj8_L 137 MINGFYPADVAVTW 150 (213)
T ss_dssp EEEEEBSSCCEEEE
T ss_pred EeeceeCCCeEEEE
Confidence 987643 3234444
No 74
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.92 E-value=2e-09 Score=74.31 Aligned_cols=51 Identities=24% Similarity=0.225 Sum_probs=40.6
Q ss_pred cccCCCcEEEEE-c------CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMET-R------GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~-~------~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..+.++.+.. . ...+.|.|.+++.+|+|+|+|+|+|.+|.+.+++.|..
T Consensus 40 ~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l~v 97 (126)
T 1he7_A 40 VLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF 97 (126)
T ss_dssp ECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEEEEE
Confidence 567777765432 1 13578999999999999999999999999999877763
No 75
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.92 E-value=6.2e-09 Score=76.83 Aligned_cols=81 Identities=15% Similarity=0.138 Sum_probs=51.3
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce-------EEEEEEecCCCCceeecCCC----CCCCCeEEEEE
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-------RAYLELSGKPNPAIFRSHPQ----GRLPNSYNITW 75 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-------~~~~~v~~~P~p~~~~~~~~----~~~~~~~~L~W 75 (152)
+|+.+... ...+|.|.+++.+|+|.|+|.|.|..|.. ...+.|...|.|+....... ......+.|.|
T Consensus 80 ~r~~~~~~-~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C 158 (250)
T 2fbo_J 80 GRASVANL-AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTC 158 (250)
T ss_dssp TTEECSCT-TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECC
T ss_pred ceEEeccC-CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEE
Confidence 45555432 24579999999999999999999988853 33455555543433322111 12367889999
Q ss_pred EecCCCCcceEEEE
Q psy15979 76 MVSSYTPLEEFKIK 89 (152)
Q Consensus 76 ~~~~~~pi~~y~~~ 89 (152)
.+.+.++. .+.|.
T Consensus 159 ~~~g~p~p-~v~W~ 171 (250)
T 2fbo_J 159 PCTDCANA-NVTWY 171 (250)
T ss_dssp CEESCTTC-EEEEE
T ss_pred EecCCCCC-eeEEE
Confidence 98774433 45543
No 76
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.92 E-value=2.6e-09 Score=68.69 Aligned_cols=50 Identities=22% Similarity=0.309 Sum_probs=43.6
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..+.|+.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 46 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 95 (99)
T 3puc_A 46 AITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLT 95 (99)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEE
Confidence 35667899998877788999999999999999999999999998876664
No 77
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.91 E-value=1e-08 Score=72.75 Aligned_cols=116 Identities=18% Similarity=0.059 Sum_probs=69.5
Q ss_pred CCCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCC-CceEEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCC
Q psy15979 5 TTERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPM-GKHRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSY 80 (152)
Q Consensus 5 ~~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~ 80 (152)
.+.|+.+.. ....+.|.|.+++.+|+|.|+|.|.|.. |.....+.|.....|....... .......+.|.|.+.+.
T Consensus 48 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 127 (191)
T 1epf_A 48 NQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSS 127 (191)
T ss_dssp BSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECS
T ss_pred CCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCC
Confidence 346676653 3567899999999999999999999998 4555555555433232211110 11246788999998866
Q ss_pred CCcceEEEEEEECCC----CC-----CCcceEEe-----cCCCeEEEEEEEEcCCCCC
Q psy15979 81 TPLEEFKIKYRKIPG----NE-----PSPMSNQL-----TGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 81 ~pi~~y~~~~r~~~~----~~-----~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g 124 (152)
++. .+.|. +.... .. .....+.| .+.+.|.| .|.|..|..
T Consensus 128 p~~-~v~W~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~~~~ 181 (191)
T 1epf_A 128 LPP-TIIWK-HKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRC--EGRILARGE 181 (191)
T ss_dssp SCC-EEEEE-ETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEE--EEEEGGGTE
T ss_pred CCC-EEEEE-ECCEEeeccCCceEEEecCCeEEECCCChhhCEEEEE--EEEEeccee
Confidence 543 34443 32110 00 01112333 33788998 578887643
No 78
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.91 E-value=2.3e-09 Score=70.48 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=33.1
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
.+.|.|.+++.+|+|.|+|+|+|.+|.++.++.|...
T Consensus 61 ~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V~ 97 (103)
T 1wwb_X 61 HGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFM 97 (103)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECCS
T ss_pred EEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEC
Confidence 4569999999999999999999999999998887643
No 79
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=98.91 E-value=1.1e-08 Score=69.21 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=51.3
Q ss_pred eEEEEEEecC---CCCcceEEEEEEECCCCCC----C-------cceE---EecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 70 SYNITWMVSS---YTPLEEFKIKYRKIPGNEP----S-------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 70 ~~~L~W~~~~---~~pi~~y~~~~r~~~~~~~----~-------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
++.|+|..+. +.||..|.|+|+......+ . ...+ .|.+++.|+|||.|.|..|.|.++....+
T Consensus 22 tv~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~ 101 (122)
T 2e3v_A 22 TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEF 101 (122)
T ss_dssp CEEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEE
T ss_pred cEEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccc
Confidence 3999999753 3469999999998765433 1 1334 36669999999999999999999987766
Q ss_pred cccccc
Q psy15979 133 VPKAKR 138 (152)
Q Consensus 133 ~~~~~~ 138 (152)
+....+
T Consensus 102 ~t~~~~ 107 (122)
T 2e3v_A 102 KTQPVR 107 (122)
T ss_dssp ECCCCC
T ss_pred cccCCC
Confidence 444333
No 80
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=98.91 E-value=8.3e-09 Score=75.18 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=81.6
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEE--EEEEe---cCCC-Cceeec-CCCCCCCCeEEEEEEecC--CCCcceEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELS---GKPN-PAIFRS-HPQGRLPNSYNITWMVSS--YTPLEEFK 87 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~~~v~---~~P~-p~~~~~-~~~~~~~~~~~L~W~~~~--~~pi~~y~ 87 (152)
...+.|.++.+.-.-.+.+.|.|..|.... .+.+. ..|. ||.... .......+++.|.|..+. +.++..|.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~ 142 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYI 142 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEE
T ss_pred ceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEE
Confidence 346888899888777888899999986542 12322 3443 443322 111112579999999753 35799999
Q ss_pred EEEEECCCCCC----------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccccccc
Q psy15979 88 IKYRKIPGNEP----------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIVPKA 136 (152)
Q Consensus 88 ~~~r~~~~~~~----------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~~~ 136 (152)
++|+....... ....+. |.+++.|.|+|.|.|..|.|.+|....+..+.
T Consensus 143 v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 143 IYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 99997654321 113344 55699999999999999999999888766643
No 81
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=98.90 E-value=8e-09 Score=67.65 Aligned_cols=71 Identities=14% Similarity=0.176 Sum_probs=52.4
Q ss_pred CCCCeEEEEEEecCCCCcceEEEEEEECCCCC-C-------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 66 RLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE-P-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~-~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
...+++.|+|..+.. ++..|.++|+...... . ...++. |.+++.|+|+|.|.|..|.|+|+.....++
T Consensus 13 ~~~~sv~lsW~pP~~-~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~~g~s~p~~~~~~~~ 91 (100)
T 3b83_A 13 ITLTTAVVTWQPPIL-PIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARNGQQYSPPVSTTFTTG 91 (100)
T ss_dssp CCSSCEEEEEECCSS-CCSEEEEEEEESSCTTTCEEEEECTTEEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred ecCCEEEEEEcCCcc-cCCEEEEEEEECCCCCCceEEEECCcceEEEECCCCCCCEEEEEEEEEeCCCCCCCEEEEEEEE
Confidence 346899999997753 7899999998765321 1 113344 556999999999999999999987665555
Q ss_pred ccc
Q psy15979 135 KAK 137 (152)
Q Consensus 135 ~~~ 137 (152)
..|
T Consensus 92 ~~~ 94 (100)
T 3b83_A 92 SLE 94 (100)
T ss_dssp CCC
T ss_pred eee
Confidence 433
No 82
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.90 E-value=1.4e-09 Score=71.04 Aligned_cols=51 Identities=27% Similarity=0.487 Sum_probs=43.4
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..+.|+.+..++....|.|.+++.+|+|.|+|.|.|..|.....+.|..
T Consensus 53 ~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 103 (107)
T 3irg_B 53 QLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp ECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 355678888877777789999999999999999999999999888766553
No 83
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.90 E-value=1.4e-09 Score=86.28 Aligned_cols=109 Identities=17% Similarity=0.148 Sum_probs=67.8
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceEEEEEEEC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~ 93 (152)
..+.|.|.+++.+|+|.|+|.|.|..|.......|.....|....... .......+.|.|.+.+.++. .+.| ++..
T Consensus 256 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p-~i~W-~k~g 333 (384)
T 3kld_A 256 SNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKP-TYRW-LKNG 333 (384)
T ss_dssp TSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCC-EEEE-EETT
T ss_pred CCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCC-eEEE-EECC
Confidence 346899999999999999999999999988765555332222111110 11235788999998765433 3444 3321
Q ss_pred ---CCCC---CCcceE-----EecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 94 ---PGNE---PSPMSN-----QLTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 94 ---~~~~---~~~~~~-----~L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
.... .....+ .+++.+.|+| .|.|.+|....++
T Consensus 334 ~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C--~A~N~~G~~~~~a 377 (384)
T 3kld_A 334 DPLLTRDRIQIEQGTLNITIVNLSDAGMYQC--VAENKHGVIFSSA 377 (384)
T ss_dssp EECCCBTTEEEETTEEEESSCCGGGCEEEEE--EEEETTEEEEEEE
T ss_pred EECCCCccEEEeCCEEEEeecChhhCEEEEE--EEEeCCceEEece
Confidence 1110 001122 2345899998 8899999765443
No 84
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.90 E-value=6.1e-09 Score=70.57 Aligned_cols=81 Identities=16% Similarity=0.265 Sum_probs=57.9
Q ss_pred EEEecCCCCceeecCCCCCCCCeEEEEEEec--CCCCcceEEEEEEECCCC--CC-------Cc---ceEEecCCCeEEE
Q psy15979 48 LELSGKPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKYRKIPGN--EP-------SP---MSNQLTGTNQYQN 113 (152)
Q Consensus 48 ~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~--~~~pi~~y~~~~r~~~~~--~~-------~~---~~~~L~~~~~Y~~ 113 (152)
+.+...|.||..... .....+++.|+|..+ ++.+|..|.++|+..... .+ .. ....|.+++.|+|
T Consensus 11 ~~v~~~P~~P~~~~~-~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~~i~~L~p~t~Y~f 89 (127)
T 1uey_A 11 APVYDVPNPPFDLEL-TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSF 89 (127)
T ss_dssp CCCCCSCCCCEEEEE-ECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECC
T ss_pred EEeecCCcCCCCcEE-EEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeeeCCCceEEEecCCCCCEEEE
Confidence 445567877664321 123568999999975 457899999999876421 11 01 1225777999999
Q ss_pred EEEEEcCCCCCCCCCC
Q psy15979 114 RRLVRKRFDRGNSTNG 129 (152)
Q Consensus 114 rV~A~N~~G~g~~s~~ 129 (152)
||.|.|..|.|.++..
T Consensus 90 rV~A~n~~G~s~~S~~ 105 (127)
T 1uey_A 90 RVMAVNSIGKSLPSEA 105 (127)
T ss_dssp EEEEEESSCBCCCCSC
T ss_pred EEEEEeCCccCCcccc
Confidence 9999999999999876
No 85
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.90 E-value=2.6e-08 Score=73.52 Aligned_cols=87 Identities=18% Similarity=0.180 Sum_probs=56.3
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc---eEEEEEEecCCC---CceeecCC---CCCCCCeEEEEEE
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK---HRAYLELSGKPN---PAIFRSHP---QGRLPNSYNITWM 76 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~---~~~~~~v~~~P~---p~~~~~~~---~~~~~~~~~L~W~ 76 (152)
.+|+.+...+...+|.|.+++.+|+|.|+|.|.|..|. ....+.|...+. |+.+...+ .......+.|.|.
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 142 (240)
T 1moe_A 63 PVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCT 142 (240)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEE
T ss_pred CccEEEEecCCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEE
Confidence 46888877677789999999999999999999998664 223455554431 22222111 1124688999999
Q ss_pred ecCCCCcceEEEEEEE
Q psy15979 77 VSSYTPLEEFKIKYRK 92 (152)
Q Consensus 77 ~~~~~pi~~y~~~~r~ 92 (152)
+.+.++......||+.
T Consensus 143 ~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 143 ASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp EESSCGGGSCEEEEEE
T ss_pred EcCccCCCCEEEEEEE
Confidence 8765422122334554
No 86
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.89 E-value=9e-10 Score=71.53 Aligned_cols=42 Identities=19% Similarity=0.255 Sum_probs=37.0
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (152)
+|..++|+.+..++..+.|.|.+++.+|+|.|+|.|.|..++
T Consensus 44 ~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~~~s 85 (93)
T 1waa_A 44 PLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTKSA 85 (93)
T ss_dssp ECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTEEEE
T ss_pred ECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCCcEE
Confidence 567788999988888899999999999999999999996543
No 87
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.89 E-value=1.3e-08 Score=76.70 Aligned_cols=119 Identities=19% Similarity=0.199 Sum_probs=70.5
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEe--cCCCCceeecCCCCCCCCeEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS--GKPNPAIFRSHPQGRLPNSYNITWMVS 78 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~ 78 (152)
+|..+.|+.+..++....|.|.+++.+|+|.|+|.|.|..|.... .+.|. .+|................+.|.|.+.
T Consensus 44 ~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~ 123 (291)
T 2wim_A 44 KIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVS 123 (291)
T ss_dssp BCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCB
T ss_pred CccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEc
Confidence 355678888888778889999999999999999999999998743 44443 333211110000012357788888887
Q ss_pred CCCCcceEEEEEEECCCCC--------CCcceEEe-----cCCCeEEEEEEEEcCCCC
Q psy15979 79 SYTPLEEFKIKYRKIPGNE--------PSPMSNQL-----TGTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 79 ~~~pi~~y~~~~r~~~~~~--------~~~~~~~L-----~~~~~Y~~rV~A~N~~G~ 123 (152)
+.++ ..+.|......... .....+.| .+.+.|.| .|.|..|.
T Consensus 124 ~~p~-~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~~~n~~~~ 178 (291)
T 2wim_A 124 SSPA-PAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRC--EGRVEARG 178 (291)
T ss_dssp CSSC-CEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEE--EEEETTTT
T ss_pred cCCC-CEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEE--EEEECCCC
Confidence 6543 23444322111100 01122333 33788988 56777754
No 88
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.89 E-value=5.4e-09 Score=80.36 Aligned_cols=121 Identities=7% Similarity=-0.016 Sum_probs=72.0
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC--C-CCCCCeEEEEEEecCCCCcceEEEEEEECC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP--Q-GRLPNSYNITWMVSSYTPLEEFKIKYRKIP 94 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~--~-~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~ 94 (152)
+.|.|.++..+|+|.|+|.|.|..|.....+.|.....|....... . ......+.|.|.+.+.++...+.| ++...
T Consensus 194 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W-~~~~~ 272 (331)
T 3u83_A 194 SRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHW-TTLNG 272 (331)
T ss_dssp EEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEE-EETTB
T ss_pred EEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEE-EECCC
Confidence 4689999999999999999999999988876665432222221111 1 123588999999977654433444 33221
Q ss_pred CCCC----CcceEEec------CCCeEEEEEEEEcCCCCCCCCCCcccccccccccccc
Q psy15979 95 GNEP----SPMSNQLT------GTNQYQNRRLVRKRFDRGNSTNGGLIVPKAKREGRQD 143 (152)
Q Consensus 95 ~~~~----~~~~~~L~------~~~~Y~~rV~A~N~~G~g~~s~~~~~~~~~~~~~~~~ 143 (152)
.-.. ....+.|. +.+.|.| .|.|.+|.. +....+.++.+..++++
T Consensus 273 ~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C--~a~N~~G~~--~~~~~l~V~~~~~~~~~ 327 (331)
T 3u83_A 273 SLPKGVEAQNRTLFFKGPINYSLAGTYIC--EATNPIGTR--SGQVEVNITEAAALEHH 327 (331)
T ss_dssp SCCTTEEEETTEEEECSCCCGGGCEEEEE--EEEETTEEE--EEEEEECCBC-------
T ss_pred cccccceecCcEEEEeCCCccccCeEEEE--EEEeccccc--eEEEEEEEeccchhhhc
Confidence 1111 11233444 3788988 789999986 44555666655555443
No 89
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=98.89 E-value=2.1e-08 Score=71.51 Aligned_cols=113 Identities=11% Similarity=0.092 Sum_probs=79.0
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEE-----EEEecCCCCceeecCCCCCCCCeEEEEEEecCC---CCcceEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-----LELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY---TPLEEFK 87 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-----~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~---~pi~~y~ 87 (152)
....+.|.++.+.-.-.|.+.|.|..|..... ......|.+|..... .....+++.|.|..+.. .++..|.
T Consensus 60 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~-~~~~~~~v~l~W~~p~~~~~~~i~~Y~ 138 (197)
T 3lpw_A 60 HKTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITL-MDVTRNSVSLSWEKPEHDGGSRILGYI 138 (197)
T ss_dssp CSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEE-EEECSSCEEEEECCCSCCTTSCCCEEE
T ss_pred CccEEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecCCCCCCCcccEE-EeccCCeEEEEecCCCcCCCCcccEEE
Confidence 34567899999888888999999999875433 222244544432210 12346899999997532 4789999
Q ss_pred EEEEECCCCCCC------cceE---EecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 88 IKYRKIPGNEPS------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 88 ~~~r~~~~~~~~------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
++|+..+...+. ..++ .|.+++.|.|+|.|.|..|.|.++..
T Consensus 139 v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 189 (197)
T 3lpw_A 139 VEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQL 189 (197)
T ss_dssp EEEEETTCSCCEEEEEESSSEEEECCCCTTCEEEEEEEEEETTEECCCEEC
T ss_pred EEEEeCCCCceEEeecccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccC
Confidence 999987654321 1334 45669999999999999999998753
No 90
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=2e-09 Score=70.22 Aligned_cols=54 Identities=17% Similarity=0.401 Sum_probs=43.5
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCc
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~ 57 (152)
+|..++++.+...+....|.|.+++.+|+|.|+|.|.|..|. ..+.|..+|.|+
T Consensus 49 ~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~--~~l~V~~~P~pp 102 (104)
T 2e6p_A 49 KVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSAF--FGVTVQDPSGPS 102 (104)
T ss_dssp ECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCCC--EEEEEECCCCSS
T ss_pred ECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceEE--EEEEEcCCCCCc
Confidence 355667888887788889999999999999999999998664 445566777654
No 91
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.88 E-value=4.2e-09 Score=75.28 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=67.4
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceE
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEF 86 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y 86 (152)
+|+.+. ..+++|.|.+++.+|+|.|+|.|.|..|.....+.|..++..|.+.... . . ..|.|.+.+.++ ..|
T Consensus 51 ~R~~~~--~~~~sL~I~~v~~~DsG~Y~C~~~n~~~~~~~~L~V~~~~~~p~i~~~~-~---~-~~L~C~~~~~p~-p~i 122 (171)
T 1ccz_A 51 NRVYLD--TVSGSLTIYNLTSSDEDEYEMESPNITDTMKFFLYVLEMVSKPMIYWEC-S---N-ATLTCEVLEGTD-VEL 122 (171)
T ss_dssp TSEEEC--TTTCCEEECSCCGGGCEEEEEECTTCCSCEEEEEEEECCCCCCEEEEET-T---T-TEEEEECSSCSS-CEE
T ss_pred CcEEEe--CCCCeEEECCCChhhCceEEEEEeCCCCcEEEEEEEECcCCCCEEEEec-C---C-cEEEEEeCCCCC-cEE
Confidence 455553 2346899999999999999999999999666677776665544443211 1 1 378999876533 345
Q ss_pred EEEEEECCCCCC--CcceEEecC---CCeEEEEEEEEcCCCCCCC
Q psy15979 87 KIKYRKIPGNEP--SPMSNQLTG---TNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 87 ~~~~r~~~~~~~--~~~~~~L~~---~~~Y~~rV~A~N~~G~g~~ 126 (152)
.|. +. +..-+ ......+.+ .+.|+| .|.|.+|....
T Consensus 123 ~W~-~~-~~~l~~~~~~~l~~~~~~~~g~Y~C--~a~N~~~~~~~ 163 (171)
T 1ccz_A 123 KLY-QG-KEHLRSLRQKTMSYQWTNLRAPFKC--KAVNRVSQESE 163 (171)
T ss_dssp EEE-ET-TEEEEEESSSEEEEECSCCSSCEEE--EEEETTEEEEE
T ss_pred EEE-EC-CEECcCCcceEEEEeccCCCceEEE--EEEcccCcccc
Confidence 553 21 11000 112223322 569999 77999997543
No 92
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.88 E-value=2.5e-08 Score=74.27 Aligned_cols=87 Identities=22% Similarity=0.294 Sum_probs=53.6
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce---EEEEEEecCCC----------Cc-eeecCC--CCCCCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSGKPN----------PA-IFRSHP--QGRLPN 69 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~~~v~~~P~----------p~-~~~~~~--~~~~~~ 69 (152)
++|+.+...+...+|.|.+++.+|+|.|.|.|.|..+.. ...+.|...|. ++ .+...+ ......
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 138 (242)
T 2znx_A 59 PSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQ 138 (242)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTS
T ss_pred CCCEEEecCCCEEEEEECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCC
Confidence 568888766677899999999999999999999986532 22455555442 11 111111 122468
Q ss_pred eEEEEEEecCCCCcceEEEEEEE
Q psy15979 70 SYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 70 ~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
++.|.|.+.+.+.......||+.
T Consensus 139 ~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 139 TLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEE
T ss_pred eEEEEEEEEccccCCcceeeEee
Confidence 89999998764311223345554
No 93
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=5.7e-09 Score=68.73 Aligned_cols=52 Identities=19% Similarity=0.281 Sum_probs=41.1
Q ss_pred CCcEEEEEc-CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEecCCCCc
Q psy15979 6 TERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSGKPNPA 57 (152)
Q Consensus 6 ~~r~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~~~P~p~ 57 (152)
++|+.+... .....|.|.+++.+|+|.|+|.|.|.+|.+... +.|...|.+|
T Consensus 53 ~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 53 SDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNSGP 107 (110)
T ss_dssp CSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEEECCSCCS
T ss_pred CCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEECCCCCC
Confidence 578888764 344589999999999999999999999998875 4555555543
No 94
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.87 E-value=7.4e-09 Score=69.47 Aligned_cols=69 Identities=12% Similarity=0.152 Sum_probs=52.1
Q ss_pred CCCeEEEEEEecC---CCCcceEEEEEEECCCC-CCC------cceE---EecCCCeEEEEEEEEcCCCCCCCCCCcccc
Q psy15979 67 LPNSYNITWMVSS---YTPLEEFKIKYRKIPGN-EPS------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIV 133 (152)
Q Consensus 67 ~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~~-~~~------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~ 133 (152)
..+++.|+|..+. +.+|..|.|+|+..... .+. ...+ .|.+++.|.|||.|.|..|.|+++....+.
T Consensus 31 ~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~ 110 (120)
T 2crm_A 31 HSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQ 110 (120)
T ss_dssp ETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCC
T ss_pred CCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEeccccEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEE
Confidence 4689999999753 35899999999987542 221 1334 366699999999999999999999876554
Q ss_pred cc
Q psy15979 134 PK 135 (152)
Q Consensus 134 ~~ 135 (152)
..
T Consensus 111 T~ 112 (120)
T 2crm_A 111 TP 112 (120)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 95
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.87 E-value=5.2e-09 Score=85.82 Aligned_cols=110 Identities=5% Similarity=0.006 Sum_probs=62.8
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECC-
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIP- 94 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~- 94 (152)
..+.|.|.+++.+|+|.|+|.|.|..|.....+.|...-.| .+...+... .. .|.|.+.+.++. .+.|......
T Consensus 373 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P-~i~~~~~~~--~g-~l~C~~~g~P~p-~i~W~~~~~~~ 447 (524)
T 2ec8_A 373 YVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKP-EILTYDRLV--NG-MLQCVAAGFPEP-TIDWYFCPGTE 447 (524)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEE-EEEEEECCS--SS-CEEEEEEEESCC-EEECCCC----
T ss_pred eEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCC-eEeecccCc--Cc-EEEEEEEeecCC-EEEEEECCCcc
Confidence 45789999999999999999999999998887776654323 222211111 12 888888765433 3443221110
Q ss_pred --------CCC----------CCcce----EE---ecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 95 --------GNE----------PSPMS----NQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 95 --------~~~----------~~~~~----~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
... .+... .. .++.+.|.| .|.|.+|....+....+
T Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C--~a~N~~G~~~~~~~l~V 508 (524)
T 2ec8_A 448 QRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVEC--KAYNDVGKTSAYFNFAF 508 (524)
T ss_dssp ------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----C--EEECSSCEEECCCCCCC
T ss_pred cccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEE--EEEcCCCceEEEEEEEE
Confidence 000 01111 11 245889988 78999998866553333
No 96
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=1.8e-08 Score=65.45 Aligned_cols=82 Identities=9% Similarity=0.067 Sum_probs=57.9
Q ss_pred CCCCceeecCCCCCCCCeEEEEEEec----CCCCcceEEEEEEECCCCCC-----CcceE---EecCCCeEEEEEEEEcC
Q psy15979 53 KPNPAIFRSHPQGRLPNSYNITWMVS----SYTPLEEFKIKYRKIPGNEP-----SPMSN---QLTGTNQYQNRRLVRKR 120 (152)
Q Consensus 53 ~P~p~~~~~~~~~~~~~~~~L~W~~~----~~~pi~~y~~~~r~~~~~~~-----~~~~~---~L~~~~~Y~~rV~A~N~ 120 (152)
+|.+|..... .....+++.|.|..+ ...++..|.++|+....... ....+ .|.+++.|.|+|.|.|.
T Consensus 8 pp~~P~~l~~-~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 86 (103)
T 2edy_A 8 PSGFPQNLHV-TGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTS 86 (103)
T ss_dssp CSCCCEEEEC-SSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEESSSCCEECSCCTTCCEEEECCEECS
T ss_pred CCCCCeeeEE-EecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcCCcceEEEcCCCCCCEEEEEEEEECC
Confidence 4445543321 233568999999987 34588999999998765321 11233 46669999999999999
Q ss_pred CCCCCCCCCcccccc
Q psy15979 121 FDRGNSTNGGLIVPK 135 (152)
Q Consensus 121 ~G~g~~s~~~~~~~~ 135 (152)
.|.|.++....+.++
T Consensus 87 ~G~g~~S~~~~~~T~ 101 (103)
T 2edy_A 87 KGSGPLSPSIQSRTM 101 (103)
T ss_dssp SCBCCCCCCCCCCCC
T ss_pred CCCCCCCCCEEEEec
Confidence 999999987766543
No 97
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.87 E-value=2e-09 Score=68.82 Aligned_cols=42 Identities=29% Similarity=0.499 Sum_probs=37.2
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (152)
+|..++++.+..++....|.|.+++.+|+|.|+|.|.|..+.
T Consensus 35 ~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~ 76 (84)
T 2lu7_A 35 RLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDSRI 76 (84)
T ss_dssp ECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTTCEE
T ss_pred EccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCEEEE
Confidence 678889999998888899999999999999999999876443
No 98
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=98.87 E-value=5.3e-08 Score=70.88 Aligned_cols=112 Identities=16% Similarity=0.175 Sum_probs=78.9
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE-EEE-ecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LEL-SGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v-~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.....+.|.++.+.-.-.+.+.|.|..|..... +.. ...|.|..+.. .....+++.|+|..+...++..|.+.|+.
T Consensus 74 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~--~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~ 151 (203)
T 2gee_A 74 SSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPPTDLRF--TNIGPDTMRVTWAPPPSIDLTNFLVRYSP 151 (203)
T ss_dssp TTCCEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCCEEEEE--EEEETTEEEEEEECCSSCCCSEEEEEEEE
T ss_pred CCccEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCCCceEE--EEcCCCEEEEEEcCCCCCCccEEEEEEEE
Confidence 345678899999888888889999988865432 222 23443333322 12346899999998766689999999998
Q ss_pred CCCCC--------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 93 IPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 93 ~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
..... ....++. |.+++.|.|+|.|.|..|.|.|..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~ 198 (203)
T 2gee_A 152 VKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 198 (203)
T ss_dssp TTCGGGCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred CCCCCccEEEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCee
Confidence 54321 1123444 556999999999999999998764
No 99
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=3.3e-09 Score=70.94 Aligned_cols=47 Identities=21% Similarity=0.232 Sum_probs=39.9
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
++|+.+...+..+.|.|.+++.+|+|.|+|.|+|..|.+...+.|..
T Consensus 67 ~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 113 (118)
T 2e7c_A 67 TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRV 113 (118)
T ss_dssp CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEE
T ss_pred CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEE
Confidence 46777777777888999999999999999999999998887766553
No 100
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.86 E-value=2.3e-08 Score=76.93 Aligned_cols=114 Identities=13% Similarity=0.180 Sum_probs=69.1
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCc-------eEEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGK-------HRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEF 86 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~-------~~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y 86 (152)
....|.|.+++.+|+|.|+|.|.|..|. ....+.|.+.+.+|.+...+ .......+.|.|.+.. +...|
T Consensus 172 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~--~~~~~ 249 (316)
T 3vh8_G 172 SKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRS--SYDMY 249 (316)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESS--CCSEE
T ss_pred ceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCC--CCcEE
Confidence 4568999999999999999999999884 33456666665555544332 1234688999999864 33345
Q ss_pred EEEEEECCCCC---------CCc--ceEE---ecCCCeEEEEEEEEcCCC---CCCCCCCccccc
Q psy15979 87 KIKYRKIPGNE---------PSP--MSNQ---LTGTNQYQNRRLVRKRFD---RGNSTNGGLIVP 134 (152)
Q Consensus 87 ~~~~r~~~~~~---------~~~--~~~~---L~~~~~Y~~rV~A~N~~G---~g~~s~~~~~~~ 134 (152)
.|. +.-.... ... ..+. +++.+.|.| .|.|..| ++.+|+...+.+
T Consensus 250 ~W~-k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~D~G~Y~C--~a~n~~~~~~~s~~S~~~~l~V 311 (316)
T 3vh8_G 250 HLS-REGGAHERRLPAVRKVNRTFQADFPLGPATHGGTYRC--FGSFRHSPYEWSDPSDPLLVSV 311 (316)
T ss_dssp EEE-ETTSSCCEEEECEECTTSCEEEEEECC-----CEEEE--EEEBTTBTTEECCCCCCEEC--
T ss_pred EEE-ECCCcCCCceeceeccCCceeEEEEcCCcCCCEEEEE--EeecCCCchhccCCCCcEEEEE
Confidence 443 3211110 000 1222 226899999 5788766 466777665444
No 101
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.86 E-value=9.4e-10 Score=71.39 Aligned_cols=43 Identities=21% Similarity=0.409 Sum_probs=37.8
Q ss_pred CcccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc
Q psy15979 1 MRLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (152)
Q Consensus 1 ~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (152)
++|..+++|.+..++....|.|.+++.+|+|.|+|+|.|..+.
T Consensus 44 ~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 86 (91)
T 2lvc_A 44 QEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDECAY 86 (91)
T ss_dssp SCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSCEEE
T ss_pred EEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcceEEE
Confidence 3678889999999888999999999999999999999886443
No 102
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.86 E-value=1.6e-08 Score=73.51 Aligned_cols=114 Identities=18% Similarity=0.214 Sum_probs=68.0
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCC-CceeecC-CC---CCCCCeEEEEEEecCCCCcceEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPN-PAIFRSH-PQ---GRLPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~-p~~~~~~-~~---~~~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
....|.|.+++.+|+|.|+|.|.|..|.....+.|. ..+. ++.+... +. ......+.|.|.+.+.++. .+.|
T Consensus 74 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W 152 (231)
T 3ojm_B 74 QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP-HIQW 152 (231)
T ss_dssp GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCC-EEEE
T ss_pred CcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCC-EEEE
Confidence 345899999999999999999999999887765544 3332 2222211 11 1135778999988765433 4444
Q ss_pred EEEECCCCC--------------------CCcceEEec-----CCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 89 KYRKIPGNE--------------------PSPMSNQLT-----GTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 89 ~~r~~~~~~--------------------~~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
.......+. .....+.|. +.+.|.| .|.|.+|....+....+
T Consensus 153 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~~~~~l~V 219 (231)
T 3ojm_B 153 IKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYIC--KVSNYIGQANQSAWLTV 219 (231)
T ss_dssp EEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEE--EEEETTEEEEEEEEEEE
T ss_pred EECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEE--EEEeccceEeeEEEEEE
Confidence 331110000 001123333 3788988 67999998744433333
No 103
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.86 E-value=5e-09 Score=70.43 Aligned_cols=64 Identities=11% Similarity=0.192 Sum_probs=49.0
Q ss_pred CCCCeEEEEEEec---CCCCcceEEEEEEECCCCCCC--------cceEE---ecCCCeEEEEEEEEcCCCC-CCCCCC
Q psy15979 66 RLPNSYNITWMVS---SYTPLEEFKIKYRKIPGNEPS--------PMSNQ---LTGTNQYQNRRLVRKRFDR-GNSTNG 129 (152)
Q Consensus 66 ~~~~~~~L~W~~~---~~~pi~~y~~~~r~~~~~~~~--------~~~~~---L~~~~~Y~~rV~A~N~~G~-g~~s~~ 129 (152)
.+.+++.|.|..+ ++.+|..|.|+|+......+. ...+. |.+++.|+|||.|.|..|. |+++..
T Consensus 22 v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~ 100 (112)
T 1bpv_A 22 ITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEP 100 (112)
T ss_dssp EETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEECTTSCEEEEEEE
T ss_pred eeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEEECCCCCCCCCCC
Confidence 3578999999953 456899999999987543321 23444 5569999999999999996 998863
No 104
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.86 E-value=6.5e-08 Score=74.72 Aligned_cols=117 Identities=10% Similarity=0.085 Sum_probs=70.5
Q ss_pred eeCCCCCEEEEEEEEcCCCceEE-EEEEe----cCCCCceeecCCCCC-----CCCeEEEEEEecC--CCCcceEEEEEE
Q psy15979 24 KVVASDFGNYSCEATNPMGKHRA-YLELS----GKPNPAIFRSHPQGR-----LPNSYNITWMVSS--YTPLEEFKIKYR 91 (152)
Q Consensus 24 ~v~~~D~G~YtC~A~N~~G~~~~-~~~v~----~~P~p~~~~~~~~~~-----~~~~~~L~W~~~~--~~pi~~y~~~~r 91 (152)
++.....-.+.|.|.|.+|...+ .+.+. .+|.||......... ...++.|+|..+. ...+..|.|+|+
T Consensus 168 ~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~ 247 (313)
T 2d9q_B 168 HLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHK 247 (313)
T ss_dssp GCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEE
T ss_pred ccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEc
Confidence 35555555556999999998654 22222 357777554322111 3579999999853 223579999999
Q ss_pred -ECCCCCCC--------cceEE---ecCCCeEEEEEEEEcCCCCCC---CCCCccccc-cccccc
Q psy15979 92 -KIPGNEPS--------PMSNQ---LTGTNQYQNRRLVRKRFDRGN---STNGGLIVP-KAKREG 140 (152)
Q Consensus 92 -~~~~~~~~--------~~~~~---L~~~~~Y~~rV~A~N~~G~g~---~s~~~~~~~-~~~~~~ 140 (152)
......+. ...+. |.+++.|+|||+|+|..|.|. +|....+.+ +....|
T Consensus 248 ~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~~ 312 (313)
T 2d9q_B 248 PQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAAP 312 (313)
T ss_dssp ESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-----
T ss_pred cCCCCCCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCCC
Confidence 55443322 12344 555999999999999988775 555554433 344433
No 105
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.86 E-value=4.3e-08 Score=72.81 Aligned_cols=87 Identities=17% Similarity=0.170 Sum_probs=53.8
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCC-----------------CCceeecCC--
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKP-----------------NPAIFRSHP-- 63 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P-----------------~p~~~~~~~-- 63 (152)
.+|+.+...+...+|.|.+++.+|+|.|.|.|.|..|.... .+.|...| .++.....+
T Consensus 62 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (250)
T 3esu_F 62 PSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPE 141 (250)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCE
T ss_pred CCCEEEeCCCCEEEEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCce
Confidence 47888877777889999999999999999999998664322 34444321 111111111
Q ss_pred CCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 64 QGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 64 ~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.......+.|.|.+.+..+......||+.
T Consensus 142 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 142 LVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp EECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred EEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 11246789999998764321234445665
No 106
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.86 E-value=7.3e-08 Score=71.21 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=67.6
Q ss_pred EEEEceeCCCCCEEEEEEEEcCCCceE----EEEEEecCCCCceeecCCC--CCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 19 TLMIRKVVASDFGNYSCEATNPMGKHR----AYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~G~~~----~~~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.|.|.+++.+|+|.|+|.|.|..|... ..+.|.+.+.+|.+...+. ......++|.|...+.. ...|.| ++.
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~-~~~~~W-~k~ 142 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIP-FDRFSL-AKE 142 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSC-CSEEEE-EET
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCC-CCEEEE-EEC
Confidence 899999999999999999999887433 2455555444444433221 12468899999654333 334544 333
Q ss_pred CCCCCC------CcceEEe-----cCCCeEEEEEEEEcC---CCCCCCCCCccccc
Q psy15979 93 IPGNEP------SPMSNQL-----TGTNQYQNRRLVRKR---FDRGNSTNGGLIVP 134 (152)
Q Consensus 93 ~~~~~~------~~~~~~L-----~~~~~Y~~rV~A~N~---~G~g~~s~~~~~~~ 134 (152)
...-.. ....+.| ++.+.|.| .|.|. ..++.+++...+.+
T Consensus 143 g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C--~a~n~~~~~~~s~~S~~~~l~V 196 (218)
T 1uct_A 143 GELSLPQHQSGEHPANFSLGPVDLNVSGIYRC--YGWYNRSPYLWSFPSNALELVV 196 (218)
T ss_dssp TCSSCCSEEECSSSEEEECCSCCGGGCEEEEE--EEECTTSTTEECCCCCCEEEEE
T ss_pred CCcccccccCCCccCEEEEccCCcccCEEEEE--EEEcCCCCCcCCCCCCcEEEEE
Confidence 211110 1123333 34889999 56775 45677777664443
No 107
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.85 E-value=2.7e-08 Score=71.47 Aligned_cols=71 Identities=17% Similarity=0.148 Sum_probs=46.0
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCce-----EEEEEEe--cCCCCceeecCCCCCCCCeEEEEEEec-CCCCcceEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVS-SYTPLEEFK 87 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~-~~~pi~~y~ 87 (152)
...+|.|.+++.+|+|.|+|.|.|..|.. ...+.|. ..+.+|...... ......+.|.|.+. ++++ ..+.
T Consensus 63 ~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~g~~~~l~C~~~~g~P~-p~i~ 140 (201)
T 1dr9_A 63 NNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE-IPTSNIRRIICSTSGGFPE-PHLS 140 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEE-CSSTTEEEEEEEEEEESSC-EEEE
T ss_pred CCcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEecc-CCCCCeEEEEEecCCccCC-CEEE
Confidence 45689999999999999999999988754 2344444 433333332211 12356889999984 5543 3444
Q ss_pred E
Q psy15979 88 I 88 (152)
Q Consensus 88 ~ 88 (152)
|
T Consensus 141 W 141 (201)
T 1dr9_A 141 W 141 (201)
T ss_dssp E
T ss_pred E
Confidence 4
No 108
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.84 E-value=6.6e-09 Score=73.55 Aligned_cols=102 Identities=10% Similarity=0.022 Sum_probs=64.8
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC-CCCCCeEEEEEEecCCCCcceEEEEEEECC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPLEEFKIKYRKIP 94 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~-~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~ 94 (152)
....|.|.+++.+|+|.|+|.|.|..++....+.|. +.+........ ......+.|.|.+.+..|...+.|. +...
T Consensus 49 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l~V~--~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~-~~g~ 125 (176)
T 1f2q_A 49 TNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVF--SDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYY-KDGE 125 (176)
T ss_dssp CSSEEEECSCCGGGCEEEEEECTTSSCCCCEEEEEE--CSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEE-ETTE
T ss_pred CceEEEEeccceecCEEEEEEcCCccccccEEEEEe--CcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEE-ECCE
Confidence 457899999999999999999999988887777776 22222221111 1246789999999765565555553 3210
Q ss_pred C-C-CCCcceEE-----ecCCCeEEEEEEEEcCCC
Q psy15979 95 G-N-EPSPMSNQ-----LTGTNQYQNRRLVRKRFD 122 (152)
Q Consensus 95 ~-~-~~~~~~~~-----L~~~~~Y~~rV~A~N~~G 122 (152)
. . ......+. .++.+.|.| .|.|..|
T Consensus 126 ~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~~ 158 (176)
T 1f2q_A 126 ALKYWYENHNISITNATVEDSGTYYC--TGKVWQL 158 (176)
T ss_dssp ECCSCCCSSEEEESSCCGGGCEEEEE--EEEETTE
T ss_pred EEeeecCCCeEEECCCCcccCEEEEE--EEEeCCc
Confidence 0 0 01122333 334789998 6688744
No 109
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.84 E-value=2.8e-08 Score=74.62 Aligned_cols=37 Identities=22% Similarity=0.128 Sum_probs=30.8
Q ss_pred CCcEEEE--EcCCEeEEEEceeCCCCCEEEEEEEEcCCC
Q psy15979 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (152)
Q Consensus 6 ~~r~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (152)
++|+.+. ......+|.|.+++.+|+|.|.|.|.|..|
T Consensus 62 ~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~ 100 (256)
T 3tf7_C 62 VNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKGT 100 (256)
T ss_dssp STTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEECTTC
T ss_pred CCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEecCCC
Confidence 4577663 345678899999999999999999999876
No 110
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=98.84 E-value=3e-08 Score=65.61 Aligned_cols=78 Identities=9% Similarity=0.042 Sum_probs=54.2
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecC---CCCcceEEEEEEECCCCCCC--------cceE---EecCCCeEEEEEEE
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSS---YTPLEEFKIKYRKIPGNEPS--------PMSN---QLTGTNQYQNRRLV 117 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~~~~~--------~~~~---~L~~~~~Y~~rV~A 117 (152)
+.|.+|..... .....+++.|+|..+. ..+|..|.|+|+......+. ...+ .|.+++.|.|||.|
T Consensus 7 ~~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 85 (111)
T 1x5y_A 7 GPTSAPQHLTV-EDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVG 85 (111)
T ss_dssp SCCCCCEEEEE-EEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEE
T ss_pred CCCcCCCCCEE-EeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEE
Confidence 34555543211 1234689999999753 34799999999886543311 1333 46669999999999
Q ss_pred EcCCCCCCCCCCc
Q psy15979 118 RKRFDRGNSTNGG 130 (152)
Q Consensus 118 ~N~~G~g~~s~~~ 130 (152)
.|..|.|.++...
T Consensus 86 ~n~~G~s~~S~~~ 98 (111)
T 1x5y_A 86 VNIAGRSEPATLL 98 (111)
T ss_dssp EETTEECCCCCCS
T ss_pred EcCCcCCCCccCC
Confidence 9999999998654
No 111
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.83 E-value=9.2e-09 Score=67.87 Aligned_cols=69 Identities=7% Similarity=0.065 Sum_probs=51.1
Q ss_pred CCCCeEEEEEEecC---CCCcceEEEEEEECCCCC-CC------cceE---EecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 66 RLPNSYNITWMVSS---YTPLEEFKIKYRKIPGNE-PS------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 66 ~~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~~~-~~------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
...+++.|.|..+. ..+|..|.|+|+...... +. ...+ .|.+++.|+|||.|.|..|.|.++....+
T Consensus 19 ~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~ 98 (109)
T 1x5x_A 19 AGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEF 98 (109)
T ss_dssp ECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEE
T ss_pred ccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEeCCccEEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEe
Confidence 35689999999753 238899999998765421 11 1334 46669999999999999999999876554
Q ss_pred cc
Q psy15979 133 VP 134 (152)
Q Consensus 133 ~~ 134 (152)
+.
T Consensus 99 ~T 100 (109)
T 1x5x_A 99 TT 100 (109)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 112
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.83 E-value=3.4e-08 Score=71.66 Aligned_cols=116 Identities=16% Similarity=0.081 Sum_probs=67.8
Q ss_pred CcEEEEEc---CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEE--ecCCCCceeecCCCCCCCCeEEEEEEecCCC
Q psy15979 7 ERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVSSYT 81 (152)
Q Consensus 7 ~r~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v--~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~ 81 (152)
+|+.+..+ ....+|.|.+++.+|+|.|+|.|.| .|.....+.| ..+|..+.............+.|.|.+.+++
T Consensus 66 ~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P 144 (222)
T 3sbw_C 66 QRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYP 144 (222)
T ss_dssp SSEEECHHHHTTTEEEEEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBS
T ss_pred CceEEccccccCCEEEEEEcCcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCC
Confidence 45555422 2457899999999999999999999 6666555444 4444333222101122457899999987754
Q ss_pred CcceEEEEEEECCCCCC------------Cc----ce--EEecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 82 PLEEFKIKYRKIPGNEP------------SP----MS--NQLTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 82 pi~~y~~~~r~~~~~~~------------~~----~~--~~L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
+ ..+.| ++..+.... .. .. ..-.+.+.|.| .|.|.+|....+
T Consensus 145 ~-p~i~W-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C--~a~n~~g~~~~~ 204 (222)
T 3sbw_C 145 K-AEVIW-TSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYC--TFRRLDPEENHT 204 (222)
T ss_dssp C-CEEEE-EETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEE--EEEETTTTEEEE
T ss_pred C-CeEEE-EECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEE--EEEeCccceeeE
Confidence 3 33443 332111000 00 01 12244789998 679999966444
No 113
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.83 E-value=1.1e-07 Score=70.97 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=54.1
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceE-----EEEEEecCCC------------------CceeecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR-----AYLELSGKPN------------------PAIFRSH 62 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-----~~~~v~~~P~------------------p~~~~~~ 62 (152)
.+|+.+...+...+|.|.+++.+|+|.|.|.|.|..|... ..+.|...|. ++.+...
T Consensus 62 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (256)
T 3ux9_B 62 PDRFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVES 141 (256)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEE
T ss_pred CCcEEEEccCCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcC
Confidence 4688887777788999999999999999999999765322 2355554431 1111111
Q ss_pred C--CCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 63 P--QGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 63 ~--~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
+ ......++.|.|.+.+..+......||+.
T Consensus 142 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 142 GGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCeEEcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 1 11246889999998764321223444554
No 114
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=98.83 E-value=1.6e-07 Score=66.90 Aligned_cols=113 Identities=18% Similarity=0.236 Sum_probs=78.9
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEEC
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~ 93 (152)
.....+.|.++.+.-.-.+.+.|.|..|.... .+.+.-.|.+|..... .....+++.|+|..+. .++..|.+.|+..
T Consensus 55 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~P~~l~~-~~~~~~sv~l~W~~p~-~~i~~Y~v~~~~~ 132 (186)
T 1qr4_A 55 VDSTSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGSPKGISF-SDITENSATVSWTPPR-SRVDSYRVSYVPI 132 (186)
T ss_dssp TTCSEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCCCSCEEE-ESCCSSCEEEEECCCS-SCCSEEEEEEEET
T ss_pred CCCCEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCCCCccEE-EEeCCCEEEEEEECCC-CcccEEEEEEEeC
Confidence 34567889999988888889999998665543 3444444554432211 1235689999999765 4689999999987
Q ss_pred CCCCC-------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 94 PGNEP-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 94 ~~~~~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
..... ...++. |.+++.|.|+|.|.|..|.|+|...
T Consensus 133 ~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~ 178 (186)
T 1qr4_A 133 TGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISG 178 (186)
T ss_dssp TCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEE
T ss_pred CCCCceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEE
Confidence 64321 123444 5569999999999999999987643
No 115
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.83 E-value=5e-09 Score=70.14 Aligned_cols=90 Identities=16% Similarity=0.193 Sum_probs=60.0
Q ss_pred CCceEEEEE--EecCCCCceeec-CCCCCCCCeEEEEEEec--CCCCcceEEEEEEECCCCC--------CCcceE---E
Q psy15979 41 MGKHRAYLE--LSGKPNPAIFRS-HPQGRLPNSYNITWMVS--SYTPLEEFKIKYRKIPGNE--------PSPMSN---Q 104 (152)
Q Consensus 41 ~G~~~~~~~--v~~~P~p~~~~~-~~~~~~~~~~~L~W~~~--~~~pi~~y~~~~r~~~~~~--------~~~~~~---~ 104 (152)
+|..+..+. +...|.||.... .......+++.|+|..+ ++.+|..|.++|+...... .....+ .
T Consensus 3 ~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (121)
T 1wf5_A 3 SGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKG 82 (121)
T ss_dssp CCCCCCCCCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEEESSCCTTCCEEEEES
T ss_pred CCcccceEEEEEeeCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCCCCceEeEcccCCCccEEEECC
Confidence 455544433 345676654330 11234568999999875 3468999999998764211 111333 3
Q ss_pred ecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 105 LTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 105 L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
|.+++.|+|||.|.|..|.|.++...
T Consensus 83 L~p~t~Y~frV~A~n~~G~s~~S~~~ 108 (121)
T 1wf5_A 83 LVPARSYQFRLCAVNDVGKGQFSKDT 108 (121)
T ss_dssp CCTTCEEEEEEEEEESSCEEEECCCC
T ss_pred cCCCCEEEEEEEEEcCCccCCCcCCc
Confidence 66799999999999999999998764
No 116
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.83 E-value=3.2e-08 Score=71.63 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=52.7
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeec-CCC--CCCCCeEEEEEEecCC
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSSY 80 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~-~~~--~~~~~~~~L~W~~~~~ 80 (152)
+|+.+...+....|.|.+++.+|+|.|+|.|.|..|.... .+.|...+.+|.+.. .+. ......+.|.|.+.+.
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~ 139 (213)
T 3d9a_L 60 SRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 139 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeee
Confidence 6888877777889999999999999999999999886432 455555443444332 111 1124689999998763
No 117
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.83 E-value=1.4e-08 Score=68.78 Aligned_cols=78 Identities=14% Similarity=0.093 Sum_probs=54.6
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEec--CCCCcceEEEEEEEC---CCCCC----------CcceE---EecCCCeEEE
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKYRKI---PGNEP----------SPMSN---QLTGTNQYQN 113 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~--~~~pi~~y~~~~r~~---~~~~~----------~~~~~---~L~~~~~Y~~ 113 (152)
+.|.||..... .....+++.|.|... ++.+|..|.|+|+.. ....+ ....+ .|.+++.|+|
T Consensus 16 ~~P~~P~~l~~-~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~f 94 (124)
T 1wis_A 16 ELPGPPTNLGI-SNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSF 94 (124)
T ss_dssp CCCCCCEEEEE-ESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECC
T ss_pred CCCccCCCCEE-EEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEE
Confidence 45666654321 123578999999864 457899999999873 22221 11233 4666999999
Q ss_pred EEEEEcCCCCCCCCCCc
Q psy15979 114 RRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 114 rV~A~N~~G~g~~s~~~ 130 (152)
||.|.|.+|.|+++...
T Consensus 95 rV~A~N~~G~s~~S~~~ 111 (124)
T 1wis_A 95 RMRQVNIVGTSPPSQPS 111 (124)
T ss_dssp CCEEECSSCBCCCCCCC
T ss_pred EEEEEECCccCCCcCCc
Confidence 99999999999999753
No 118
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.83 E-value=5.7e-09 Score=69.75 Aligned_cols=52 Identities=23% Similarity=0.224 Sum_probs=40.4
Q ss_pred ccCCCcEEEEEcC----CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCC
Q psy15979 3 LETTERRIMETRG----SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (152)
Q Consensus 3 l~~~~r~~i~~~~----~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P 54 (152)
|..+.++.+.... ..+.|.|.+++.+|+|.|+|+|+|.+|.+++++.|....
T Consensus 46 l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 101 (118)
T 1wwc_A 46 LRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLK 101 (118)
T ss_dssp CCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCSC
T ss_pred CCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEcc
Confidence 4455555554221 466899999999999999999999999999988876443
No 119
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.83 E-value=6.1e-09 Score=66.85 Aligned_cols=47 Identities=26% Similarity=0.305 Sum_probs=41.5
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.+.|+.+...+..++|.|.+++.+|+|.|+|.|.|..|.+...+.|.
T Consensus 50 ~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 96 (100)
T 3irg_A 50 EQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIH 96 (100)
T ss_dssp GGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEE
Confidence 45788888877789999999999999999999999999988876664
No 120
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.82 E-value=1e-07 Score=69.92 Aligned_cols=74 Identities=26% Similarity=0.397 Sum_probs=50.0
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cC-CCCceeec-CCC---CCCCCeEEEEEEecCCCCcceEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GK-PNPAIFRS-HPQ---GRLPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~-P~p~~~~~-~~~---~~~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
....|.|.+++.+|+|.|+|.|.|..|.....+.|. .. |.++.... .+. ......+.|.|.+.+.++. .+.|
T Consensus 70 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p-~v~W 148 (241)
T 3grw_A 70 QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP-HIQW 148 (241)
T ss_dssp GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC-EEEE
T ss_pred cceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC-EEEE
Confidence 455899999999999999999999999887765554 32 22333221 111 1235789999999776443 4555
Q ss_pred EE
Q psy15979 89 KY 90 (152)
Q Consensus 89 ~~ 90 (152)
..
T Consensus 149 ~~ 150 (241)
T 3grw_A 149 LK 150 (241)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 121
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.82 E-value=1.9e-08 Score=71.74 Aligned_cols=115 Identities=17% Similarity=0.101 Sum_probs=69.0
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec--CCC--CceeecCC---CCCCCCeEEEEEEe
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPN--PAIFRSHP---QGRLPNSYNITWMV 77 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~--~P~--p~~~~~~~---~~~~~~~~~L~W~~ 77 (152)
+.++.+.. .+....|.|.+++.+|+|.|+|.|.|..|.....+.|.. .|. .+.+...+ .......+.|.|.+
T Consensus 49 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 128 (197)
T 2j8h_A 49 GLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF 128 (197)
T ss_dssp SSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEE
T ss_pred CCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEE
Confidence 45777754 455679999999999999999999999998877655543 221 01110000 01235678899988
Q ss_pred cCCCCcceEEEEEEECC---CCCC-------CcceE------EecCCCeEEEEEEEEcCCCCC
Q psy15979 78 SSYTPLEEFKIKYRKIP---GNEP-------SPMSN------QLTGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 78 ~~~~pi~~y~~~~r~~~---~~~~-------~~~~~------~L~~~~~Y~~rV~A~N~~G~g 124 (152)
.+.++. .+.|. +... .... ....+ ...+.+.|.| .|.|.+|..
T Consensus 129 ~g~p~p-~i~W~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C--~a~N~~g~~ 187 (197)
T 2j8h_A 129 SGKPDP-VITWQ-KGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVV--CAKNRFGID 187 (197)
T ss_dssp EEESCC-EEEEE-ESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEE--EEEETTEEE
T ss_pred EecCCC-cEEEE-ECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEE--EEEeCCCcE
Confidence 765432 34443 3211 0000 01122 2333788988 679999875
No 122
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=2.6e-08 Score=65.21 Aligned_cols=82 Identities=22% Similarity=0.335 Sum_probs=58.1
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecC--CCCcceEEEEEEECCCCCCC-----cceE---EecCCCeEEEEEEEEcCC
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSS--YTPLEEFKIKYRKIPGNEPS-----PMSN---QLTGTNQYQNRRLVRKRF 121 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~~~-----~~~~---~L~~~~~Y~~rV~A~N~~ 121 (152)
+.|.||..... .....+++.|+|..+. +.+|..|.|+|+......+. ...+ .|.+++.|.|+|.|.|..
T Consensus 6 ~~P~~P~~l~~-~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 84 (106)
T 2ed8_A 6 SGPGPVENLQA-VSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYKLEGLKKFTEYSLRFLAYNRY 84 (106)
T ss_dssp CCCCCCEEEEE-ECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEECSSCEEEESCCTTCEEEEEEEEECSS
T ss_pred CCCcCCceeEE-EecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 45666543321 1234689999999763 35799999999987654311 1333 466699999999999999
Q ss_pred CCCCCCCCccccc
Q psy15979 122 DRGNSTNGGLIVP 134 (152)
Q Consensus 122 G~g~~s~~~~~~~ 134 (152)
|.|.++....+.+
T Consensus 85 G~g~~S~~~~~~T 97 (106)
T 2ed8_A 85 GPGVSTDDITVVT 97 (106)
T ss_dssp CEEEECCCEEEEC
T ss_pred ccCCCcCCEEEEc
Confidence 9999887776544
No 123
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.81 E-value=5.9e-08 Score=73.68 Aligned_cols=87 Identities=17% Similarity=0.208 Sum_probs=53.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce---EEEEEEecCCC-----------CceeecCC---CCCCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSGKPN-----------PAIFRSHP---QGRLP 68 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~~~v~~~P~-----------p~~~~~~~---~~~~~ 68 (152)
++|+.+...+...+|.|.+++.+|+|.|.|.|.|..|.. ...+.|...|. |+.....+ .....
T Consensus 70 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G 149 (276)
T 3auv_A 70 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPG 149 (276)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTT
T ss_pred CCCEEEeccCCeEEEEEccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCC
Confidence 568888776777899999999999999999999986542 12344444331 22221111 11246
Q ss_pred CeEEEEEEecCCCCcceEEEEEEE
Q psy15979 69 NSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 69 ~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
..+.|.|.+.+..+......||+.
T Consensus 150 ~~v~L~C~~~g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 150 GSLRLSCAASGFTISDYWIHWVRQ 173 (276)
T ss_dssp CCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CeEEEEEEecCccCCCCEEEEEEc
Confidence 889999998765432223444554
No 124
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.81 E-value=1e-08 Score=65.99 Aligned_cols=49 Identities=22% Similarity=0.226 Sum_probs=39.8
Q ss_pred ccCCCcEEEE-EcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 3 LETTERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 3 l~~~~r~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
|..+.++.+. ..+....|.|.+++.+|+|.|+|+|.|..|...+.+.|.
T Consensus 46 ~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 95 (99)
T 1g1c_A 46 IERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLL 95 (99)
T ss_dssp CCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEE
Confidence 4555666554 356678899999999999999999999999998876654
No 125
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=2.5e-08 Score=65.81 Aligned_cols=78 Identities=8% Similarity=0.058 Sum_probs=54.5
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecC---CCCcceEEEEEEECCCCCC--------CcceEE---ecCCCeEEEEEEE
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSS---YTPLEEFKIKYRKIPGNEP--------SPMSNQ---LTGTNQYQNRRLV 117 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~~~~--------~~~~~~---L~~~~~Y~~rV~A 117 (152)
.+|.+|..... .....+++.|.|..+. ..++..|.|+|+......+ ....+. |.+++.|+|||.|
T Consensus 6 ~~P~~P~~l~~-~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2yuw_A 6 SGTSPPTLLTV-DSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKA 84 (110)
T ss_dssp CCSCCCEEEEE-EEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCCccEE-EeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEE
Confidence 45666543211 1234689999999753 3589999999998654321 123444 5569999999999
Q ss_pred EcCCCCCCCCCCc
Q psy15979 118 RKRFDRGNSTNGG 130 (152)
Q Consensus 118 ~N~~G~g~~s~~~ 130 (152)
.|..|.|+++...
T Consensus 85 ~n~~G~s~~S~~~ 97 (110)
T 2yuw_A 85 VNAAGASEPKYYS 97 (110)
T ss_dssp EETTEECCCEECS
T ss_pred EcCCcCCCCcCCC
Confidence 9999999988643
No 126
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.81 E-value=7.3e-08 Score=71.54 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=53.9
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceE---EEEEEecCCC----------Cc-eeecCC--CCCCCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPN----------PA-IFRSHP--QGRLPN 69 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~~~v~~~P~----------p~-~~~~~~--~~~~~~ 69 (152)
++|+.+...+...+|.|.+++.+|+|.|.|.|.|..+... ..+.|...|. |+ .+...+ ......
T Consensus 64 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 143 (247)
T 1svz_A 64 PDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGE 143 (247)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTC
T ss_pred CCcEEeccCCCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCC
Confidence 4688887666778999999999999999999999865421 2455554331 22 222111 122467
Q ss_pred eEEEEEEecCCCCcceEEEEEEE
Q psy15979 70 SYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 70 ~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
++.|.|.+.+..+......||+.
T Consensus 144 ~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 144 TVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEE
T ss_pred cEEEEEEEcCcccCCcEEEEEEe
Confidence 89999998765321223344554
No 127
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.81 E-value=4e-08 Score=74.64 Aligned_cols=120 Identities=16% Similarity=0.053 Sum_probs=70.6
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC--CCC--ceeecCC---CCCCCCeEEEEEEe
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK--PNP--AIFRSHP---QGRLPNSYNITWMV 77 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~--P~p--~~~~~~~---~~~~~~~~~L~W~~ 77 (152)
+.++.+.. .+..+.|.|.+++.+|+|.|+|.|.|..|.....+.|... |.. +.....+ .......+.|.|.+
T Consensus 49 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 128 (305)
T 2nzi_A 49 GLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF 128 (305)
T ss_dssp SSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEE
T ss_pred CCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEE
Confidence 45677654 4556799999999999999999999999988776555432 211 1100000 01235788999988
Q ss_pred cCCCCcceEEEEEEECCC-CCC---------CcceEE----ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 78 SSYTPLEEFKIKYRKIPG-NEP---------SPMSNQ----LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 78 ~~~~pi~~y~~~~r~~~~-~~~---------~~~~~~----L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.+.++. .+.| ++.... ... ....+. +.....+.|++.|.|.+|....+
T Consensus 129 ~g~p~p-~i~W-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~ 190 (305)
T 2nzi_A 129 SGKPDP-VITW-QKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT 190 (305)
T ss_dssp EEESCC-EEEE-EESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEE
T ss_pred CCCCCC-EEEE-EECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeE
Confidence 765432 3443 332111 000 011222 33344445555889999987544
No 128
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=98.81 E-value=1.9e-08 Score=67.57 Aligned_cols=64 Identities=19% Similarity=0.310 Sum_probs=49.2
Q ss_pred CCCeEEEEEEec--CCCCcceEEEEEEECC-CCCC---------CcceE---EecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 67 LPNSYNITWMVS--SYTPLEEFKIKYRKIP-GNEP---------SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 67 ~~~~~~L~W~~~--~~~pi~~y~~~~r~~~-~~~~---------~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
..+++.|.|... ++.+|..|.|+|+... ...+ ....+ .|.+++.|+|||.|.|..|.|.++...
T Consensus 30 ~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~ 108 (121)
T 1x4z_A 30 SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPS 108 (121)
T ss_dssp CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEEEETTEECCCCCCC
T ss_pred cCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCC
Confidence 468999999963 3468999999999875 2222 11333 466699999999999999999998755
No 129
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.80 E-value=6.1e-09 Score=73.92 Aligned_cols=112 Identities=19% Similarity=0.173 Sum_probs=67.3
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceE-E--EEEEecCCCCceeecCCC---CCCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR-A--YLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-~--~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~ 79 (152)
+.|+.+..+ ...|.|.+++.+|+|.|+|.+.|..|... . .+.|...|. +...+. ......+.|.|.+.+
T Consensus 52 ~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~---~~~~~~~~~~~~g~~~~l~C~~~g 126 (192)
T 2iep_A 52 DTRYSIREN--GQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPK---ITRPPINVKIIEGLKAVLPCTTMG 126 (192)
T ss_dssp CTTEEEEGG--GTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEE---EEECCCCEEEETTSCEEECCEEEE
T ss_pred CccEEEcCC--ccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCc---cccCCcceEEeCCCcEEEEEEEec
Confidence 567777643 35799999999999999999999999843 3 344444332 111111 113567889998866
Q ss_pred CCCcceEEEEEEEC---CCCC----CCcceEEe-----cCCCeEEEEEEEEcCCCCCCC
Q psy15979 80 YTPLEEFKIKYRKI---PGNE----PSPMSNQL-----TGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 80 ~~pi~~y~~~~r~~---~~~~----~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
.++. .+.| ++.. .... .....+.| .+.+.|.| .|.|.+|....
T Consensus 127 ~p~~-~v~W-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~s 181 (192)
T 2iep_A 127 NPKP-SVSW-IKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRC--VAKNSLGTAYS 181 (192)
T ss_dssp ESCC-EEEE-EETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEE--EEEETTEEEEC
T ss_pred cCCc-eEEE-EeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEE--EEEcCCCcEEE
Confidence 5433 3444 3321 1110 01122333 33788988 66899987643
No 130
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=98.80 E-value=5.4e-08 Score=81.77 Aligned_cols=116 Identities=15% Similarity=0.206 Sum_probs=78.8
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCc-----eEEEEEEecCCCCce-eecCCCCCCCCeEEEEEEecC--CCCcceEEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGK-----HRAYLELSGKPNPAI-FRSHPQGRLPNSYNITWMVSS--YTPLEEFKI 88 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~-----~~~~~~v~~~P~p~~-~~~~~~~~~~~~~~L~W~~~~--~~pi~~y~~ 88 (152)
...++|.++.+.-.-.+++.|.|..|. ....+.+.-.|.+|. ... .....+++.|+|..+. +.+|..|.|
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~--~~~s~tSV~LsW~pP~~~ng~I~~Y~V 476 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRL--EGRSTTSLSVSWSIPPPQQSRVWKYEV 476 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEE--EECCC-CCEEEEECCTTTTTTCSEEEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCce--eeccCCeEEEEEECCcCCCCcccEEEE
Confidence 457889999999999999999999996 233455554443322 211 2345689999999753 457999999
Q ss_pred EEEECCCCC------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 89 KYRKIPGNE------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 89 ~~r~~~~~~------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
.|+...... ....++. |.+++.|.|+|.|.|..|.|.+|....+.+
T Consensus 477 ~y~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T 531 (536)
T 3fl7_A 477 TYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531 (536)
T ss_dssp EEEEC--CCCCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEEC
T ss_pred EEEECCCCceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEe
Confidence 999875431 1113444 555999999999999999999988775544
No 131
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.80 E-value=9.2e-09 Score=77.49 Aligned_cols=122 Identities=13% Similarity=0.127 Sum_probs=72.4
Q ss_pred ccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEE-cCCCceEEE--EEEecC-CCCceeecCCCC---CCCCeEEEEE
Q psy15979 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEAT-NPMGKHRAY--LELSGK-PNPAIFRSHPQG---RLPNSYNITW 75 (152)
Q Consensus 3 l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~-N~~G~~~~~--~~v~~~-P~p~~~~~~~~~---~~~~~~~L~W 75 (152)
+..+.++.+... ..|.|.+++.+|+|.|+|.|. |..|..... +.|... +.||.+...+.. .....+.|.|
T Consensus 132 ~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C 208 (289)
T 3ejj_X 132 VLRKTVYFFSPW---RGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVC 208 (289)
T ss_dssp CCTTCCEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEE
T ss_pred cCCCccEEECCC---CCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEE
Confidence 445667777533 469999999999999999999 555554444 444432 244444332211 2468899999
Q ss_pred EecCCCCcceEEEEEEE--CCCCC-----CC----cceEEe-----cCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 76 MVSSYTPLEEFKIKYRK--IPGNE-----PS----PMSNQL-----TGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 76 ~~~~~~pi~~y~~~~r~--~~~~~-----~~----~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
.+.+..|...+.|.... ..... .. ...+.| .+.+.|.| .|.|.+|....+..
T Consensus 209 ~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~s~~ 276 (289)
T 3ejj_X 209 SATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSC--VASNDVGTRTATMN 276 (289)
T ss_dssp EEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEE--EEECSSCEEEEEEE
T ss_pred EeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEE--EEEcCCCCccccEE
Confidence 98764444445543211 11100 00 122333 33788988 77999998765543
No 132
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=7e-09 Score=68.11 Aligned_cols=56 Identities=27% Similarity=0.395 Sum_probs=41.0
Q ss_pred cccCCCcEEEE-EcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEecCCCCc
Q psy15979 2 RLETTERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSGKPNPA 57 (152)
Q Consensus 2 ~l~~~~r~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~~~P~p~ 57 (152)
+|..+.++.+. .......|.|.+++.+|+|.|+|.|.|..|..... +.|..+|.+|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 49 PVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESGP 107 (110)
T ss_dssp BCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEECCCCSS
T ss_pred ECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEeCCCCCC
Confidence 34444554443 34445789999999999999999999999998875 4455666554
No 133
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.80 E-value=1e-07 Score=70.62 Aligned_cols=85 Identities=12% Similarity=0.087 Sum_probs=54.1
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE----EEEEecCC------------CCceeecCCC---
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA----YLELSGKP------------NPAIFRSHPQ--- 64 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~----~~~v~~~P------------~p~~~~~~~~--- 64 (152)
.+|+.+.. .+...+|.|.+++.+|+|.|+|.|.|..+.... .+.|...| .++.+...+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (247)
T 2ghw_B 67 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLS 146 (247)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEE
T ss_pred cCcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEE
Confidence 46888865 345778999999999999999999998443222 34554432 1222222111
Q ss_pred CCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 65 GRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 65 ~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.....++.|.|.+.+..+. . ..||+.
T Consensus 147 v~~G~~v~L~C~~~~~~~~-~-v~W~k~ 172 (247)
T 2ghw_B 147 LSPGERATLSCRASQSVRS-N-LAWYQQ 172 (247)
T ss_dssp ECTTSCEEEEEEESSCCTT-C-EEEEEE
T ss_pred ecCCCcEEEEEEeCCCccc-e-EEEEEE
Confidence 1246889999998766443 3 334553
No 134
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.80 E-value=2e-08 Score=66.48 Aligned_cols=82 Identities=17% Similarity=0.180 Sum_probs=58.0
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCCC------CcceE---EecCCCeEEEEEEEEcCCC
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNEP------SPMSN---QLTGTNQYQNRRLVRKRFD 122 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~~------~~~~~---~L~~~~~Y~~rV~A~N~~G 122 (152)
+.|.+|..... .....+++.|+|..+...++..|.++|+....... ....+ .|.+++.|.|||.|.|..|
T Consensus 16 ~~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 94 (115)
T 1x5z_A 16 GVPGQPLNFKA-EPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQG 94 (115)
T ss_dssp CCCCCCEEEEE-ECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEEECEEEECSSC
T ss_pred CCCCCCccCEe-eeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEecCCCcEEEECCCCCCCeEEEEEEEECCCc
Confidence 35554443221 12346899999998765589999999998754431 12334 4666999999999999999
Q ss_pred CCCCCCCccccc
Q psy15979 123 RGNSTNGGLIVP 134 (152)
Q Consensus 123 ~g~~s~~~~~~~ 134 (152)
.|.++....+.+
T Consensus 95 ~g~~S~~~~~~T 106 (115)
T 1x5z_A 95 LGASTAEISART 106 (115)
T ss_dssp EEEECCCEEEEC
T ss_pred ccCCCcCEEEec
Confidence 999988765544
No 135
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.80 E-value=4.1e-08 Score=64.62 Aligned_cols=83 Identities=14% Similarity=0.170 Sum_probs=57.4
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecC--CCCcceEEEEEEECCCCCCC-------cceEE---ecCCCeEEEEEEEEc
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSS--YTPLEEFKIKYRKIPGNEPS-------PMSNQ---LTGTNQYQNRRLVRK 119 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~~~-------~~~~~---L~~~~~Y~~rV~A~N 119 (152)
..|.+|..... .....+++.|.|..+. +.+|..|.++|+........ ...+. |.+++.|.|||.|.|
T Consensus 9 ~~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 87 (111)
T 1x5l_A 9 AAPSQVVVIRQ-ERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRART 87 (111)
T ss_dssp CCCCCCCCEEC-SCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEESSSEEEECSCCTTCEEEECEEEEE
T ss_pred CCCCCCceEEE-EEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEecCCCCEEEEcCCCCCCEEEEEEEEEe
Confidence 45555432221 1245689999999753 35789999999987532211 13343 556999999999999
Q ss_pred CCCCCCCCCCcccccc
Q psy15979 120 RFDRGNSTNGGLIVPK 135 (152)
Q Consensus 120 ~~G~g~~s~~~~~~~~ 135 (152)
..|.|.++....+.+.
T Consensus 88 ~~G~g~~S~~~~~~T~ 103 (111)
T 1x5l_A 88 SAGCGRFSQAMEVETG 103 (111)
T ss_dssp TTEECCCCCCEEEECC
T ss_pred CCcCCCCcccEEEEcC
Confidence 9999999887766544
No 136
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.80 E-value=2.7e-08 Score=72.76 Aligned_cols=106 Identities=12% Similarity=0.115 Sum_probs=64.6
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceE---EEEEEecCC------------CCceeecCCC---CCCCCeEEEEEEe
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKP------------NPAIFRSHPQ---GRLPNSYNITWMV 77 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~~~v~~~P------------~p~~~~~~~~---~~~~~~~~L~W~~ 77 (152)
....|.|.+++.+|+|.|+|.|.|..|... ..+.|...| .++.+...+. ......+.|.|.+
T Consensus 63 ~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~ 142 (218)
T 3k0w_A 63 NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVA 142 (218)
T ss_dssp CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEE
T ss_pred CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEe
Confidence 456899999999999999999999998543 345554432 1123322221 1235789999998
Q ss_pred cCCCCcceEEEEEEECCC-CCCCcceEEe-----cCCCeEEEEEEEEcCCCCCC
Q psy15979 78 SSYTPLEEFKIKYRKIPG-NEPSPMSNQL-----TGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 78 ~~~~pi~~y~~~~r~~~~-~~~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~ 125 (152)
.+.++. .+.|. +.... .......+.| .+.+.|.| .|.|.+|...
T Consensus 143 ~g~p~~-~v~W~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~g~~~ 192 (218)
T 3k0w_A 143 VGSPIP-HYQWF-KNELPLTHETKKLYMVPYVDLEHQGTYWC--HVYNDRDSQD 192 (218)
T ss_dssp EBSSCC-EEEEE-ETTEECTTCCSSEEEESSCCGGGCEEEEE--EEECSSCEEE
T ss_pred cccCCC-eEEEE-ECCEECCCCCCCEEEEeecChhcCEEEEE--EEEcCCCCce
Confidence 665433 35543 32110 0111123333 34889988 6799888654
No 137
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.79 E-value=2.8e-08 Score=75.20 Aligned_cols=118 Identities=7% Similarity=0.035 Sum_probs=72.5
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCE-EEEEEEEcCCCceEE---EEEEecCC-CCceeecCCC---CCCCCeEEE
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFG-NYSCEATNPMGKHRA---YLELSGKP-NPAIFRSHPQ---GRLPNSYNI 73 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G-~YtC~A~N~~G~~~~---~~~v~~~P-~p~~~~~~~~---~~~~~~~~L 73 (152)
+|..+.++.+... ..|.|.+++.+|+| .|+|.|.|..|.... .+.|...+ .||.+...+. ......+.|
T Consensus 132 ~l~~~~~~~~~~~---~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l 208 (290)
T 2o26_X 132 SLPTDLTFVPNPK---AGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTV 208 (290)
T ss_dssp CCCTTCEEEEETT---TEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEE
T ss_pred CCCCCCceeeCCC---CCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEE
Confidence 4555667776543 37999999999999 999999999766433 34444222 4444433221 224688999
Q ss_pred EEEecCCCCcceEEEEEEECCC---CC--C-----------CcceEE-----ecCCCeEEEEEEEEcCCCCC
Q psy15979 74 TWMVSSYTPLEEFKIKYRKIPG---NE--P-----------SPMSNQ-----LTGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 74 ~W~~~~~~pi~~y~~~~r~~~~---~~--~-----------~~~~~~-----L~~~~~Y~~rV~A~N~~G~g 124 (152)
.|.+.+.++...+.|....... .. . ....+. ..+.+.|.| .|.|.+|..
T Consensus 209 ~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C--~a~N~~g~~ 278 (290)
T 2o26_X 209 VCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMC--YANNTFGSA 278 (290)
T ss_dssp EEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEE--EEECSSCEE
T ss_pred EEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEE--EEeCCCCcE
Confidence 9999865433335554332220 00 0 011223 334789988 679999976
No 138
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.79 E-value=2.9e-08 Score=74.78 Aligned_cols=77 Identities=10% Similarity=0.111 Sum_probs=49.6
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCc---eE--EEEEEecCCCCceeecCC--CCCCCCeEEEEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK---HR--AYLELSGKPNPAIFRSHP--QGRLPNSYNITWM 76 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~---~~--~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~ 76 (152)
++|+.+..+ +...+|.|.+++.+|+|.|+|.|.|..|. .. ..+.|.+.+.|....... ......++.|.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~ 144 (256)
T 1nqb_A 65 KSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCR 144 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEE
T ss_pred CCeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeE
Confidence 468888653 45789999999999999999999999873 11 123333333222111110 0124688999999
Q ss_pred ecCCCC
Q psy15979 77 VSSYTP 82 (152)
Q Consensus 77 ~~~~~p 82 (152)
+.+..+
T Consensus 145 ~~~~~~ 150 (256)
T 1nqb_A 145 SSQSIV 150 (256)
T ss_dssp ESSCCB
T ss_pred ecCccc
Confidence 876543
No 139
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=6.1e-09 Score=68.62 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=40.9
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~ 55 (152)
+|..++|+.+..++..++|.|.+++.+|+|.|+|.|.|.. ..+.+.|..+|.
T Consensus 49 ~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~--~~a~L~V~~~p~ 100 (104)
T 2eny_A 49 TVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRGLT--SKASLIVRERSG 100 (104)
T ss_dssp BCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETTEE--EEECEEEECCCS
T ss_pred ECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECCee--EEEEEEEeCCCc
Confidence 5677889999888888999999999999999999997642 333455555553
No 140
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.79 E-value=1.9e-08 Score=66.34 Aligned_cols=68 Identities=16% Similarity=0.232 Sum_probs=50.7
Q ss_pred CCCeEEEEEEecC--CCCcceEEEEEEECCCCCC-----CcceE---EecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 67 LPNSYNITWMVSS--YTPLEEFKIKYRKIPGNEP-----SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 67 ~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~~-----~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
..+++.|.|..+. +.+|..|.|+|+....... ....+ .|.+++.|.|||.|.|..|.|.++....+..
T Consensus 20 s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T 97 (106)
T 1x4x_A 20 SATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVT 97 (106)
T ss_dssp ETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEESCSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEEC
T ss_pred CCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeCCcceEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEEC
Confidence 4689999999753 3589999999987642210 11233 4666999999999999999999887665544
No 141
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.79 E-value=1.1e-07 Score=72.05 Aligned_cols=86 Identities=14% Similarity=0.200 Sum_probs=58.8
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec--------------CCCCceeec-CCCCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--------------KPNPAIFRS-HPQGR 66 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~--------------~P~p~~~~~-~~~~~ 66 (152)
+|..+.|+.+...+....|.|.+++.+|+|.|+|.|.|..|... ...|.. .|....... .....
T Consensus 42 ~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 120 (312)
T 2y23_A 42 STEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEIL 120 (312)
T ss_dssp ECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEEC
T ss_pred ECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEEeeeeeeecccccCCCCccccccCCceEEe
Confidence 46667899998888889999999999999999999999999766 334432 332211110 11112
Q ss_pred CCCeEEEEEEecCCCCcceEEE
Q psy15979 67 LPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 67 ~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
....+.|.|.+....|...+.|
T Consensus 121 ~G~~v~l~C~~~~~~p~~~v~W 142 (312)
T 2y23_A 121 EKGQVRFWMQAEKLSGNAKVNY 142 (312)
T ss_dssp SSSCEEEEEEESCCCSSCEEEE
T ss_pred eCCCEEEEEEEEeCCCCCEEEE
Confidence 3578999999884334444554
No 142
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.79 E-value=9.3e-08 Score=70.79 Aligned_cols=106 Identities=11% Similarity=0.019 Sum_probs=65.7
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEE--EecCCCCceeecCCC--CCCCCeEEEEEEecCCC--CcceEEEEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLE--LSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYT--PLEEFKIKY 90 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~--v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~--pi~~y~~~~ 90 (152)
...|.|.+++.+|+|.|+|.|.|..|.....+. |...+.++.+...+. ......+.|.|.+.+.+ |...+.+.+
T Consensus 130 ~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w 209 (262)
T 3rjd_A 130 NSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSF 209 (262)
T ss_dssp CCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEE
T ss_pred CCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEE
Confidence 467999999999999999999999987777544 444444455443321 12468899999998764 333333322
Q ss_pred EECCCCC---CCcceEE-----ecCCCeEEEEEEEEcCCCCC
Q psy15979 91 RKIPGNE---PSPMSNQ-----LTGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 91 r~~~~~~---~~~~~~~-----L~~~~~Y~~rV~A~N~~G~g 124 (152)
.+.+..- .....+. .++.+.|.| .|.|..|..
T Consensus 210 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~G~~ 249 (262)
T 3rjd_A 210 YMGSKTLRGRNTSSEYQILTARREDSGLYWC--EAATEDGNV 249 (262)
T ss_dssp EETTEEEEEEESCCEEEESSCCGGGCEEEEE--EEEETTSSC
T ss_pred EeCCcEecccCCCceEEEEEechhhCeEEEE--EEEcccCce
Confidence 2221110 0112233 334889998 679999964
No 143
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.78 E-value=9.3e-09 Score=66.15 Aligned_cols=45 Identities=29% Similarity=0.384 Sum_probs=38.0
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.++.+...+...+|.|.+++.+|+|.|+|.|.|..|.+...+.|.
T Consensus 51 ~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~ 95 (99)
T 1u2h_A 51 RRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLE 95 (99)
T ss_dssp TEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred CEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEE
Confidence 456666666677899999999999999999999999998876654
No 144
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.78 E-value=2.1e-08 Score=65.58 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=54.4
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecC--CCCcceEEEEEEECCCCCCC-------cceE---EecCCCeEEEEEEEEc
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSS--YTPLEEFKIKYRKIPGNEPS-------PMSN---QLTGTNQYQNRRLVRK 119 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~~~-------~~~~---~L~~~~~Y~~rV~A~N 119 (152)
+.|.+|.+... ....+++.|+|..+. ..+|..|.|+|+......+. ...+ .|.+++.|.|||.|.|
T Consensus 6 ~~P~~p~~~v~--~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 83 (107)
T 2dn7_A 6 SGPGRPTMMIS--TTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKN 83 (107)
T ss_dssp CCCCCCEEEEE--ECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEE
T ss_pred CCCCCCcEeEE--ecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEc
Confidence 45654443221 125689999999863 45799999999987644321 1234 4666999999999999
Q ss_pred CCCCCCCCCCc
Q psy15979 120 RFDRGNSTNGG 130 (152)
Q Consensus 120 ~~G~g~~s~~~ 130 (152)
..|.|.++...
T Consensus 84 ~~G~g~~s~~~ 94 (107)
T 2dn7_A 84 RAGLGEEFEKE 94 (107)
T ss_dssp TTEEEEEEEEE
T ss_pred CCcccCCeeeE
Confidence 99999988743
No 145
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.78 E-value=1.6e-08 Score=67.77 Aligned_cols=51 Identities=31% Similarity=0.444 Sum_probs=40.6
Q ss_pred CCcEEEEEcC-CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCC
Q psy15979 6 TERRIMETRG-SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNP 56 (152)
Q Consensus 6 ~~r~~i~~~~-~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p 56 (152)
++|+.+...+ ...+|.|.+++.+|+|.|+|+|.|..|.....+.|. .+|.+
T Consensus 60 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 60 TDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp BTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEECCSCC
T ss_pred CCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEeCCCCC
Confidence 5788887654 345899999999999999999999999998875554 44443
No 146
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.78 E-value=2.7e-08 Score=75.88 Aligned_cols=107 Identities=18% Similarity=0.142 Sum_probs=69.5
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceE---EEEEEecCCCCceeecCCC---CCCCCeEEEEEEecCCCCcceEEEEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKIKY 90 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~pi~~y~~~~ 90 (152)
.+.|.|.+++.+|+|.|+|+|.|..|... ..+.|...+.||.+...+. ......+.|.|.+.+.++. .+.| +
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p-~v~W-~ 240 (304)
T 2yd9_A 163 SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMP-YVKW-M 240 (304)
T ss_dssp TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCC-EEEE-E
T ss_pred CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCC-EEEE-E
Confidence 34899999999999999999999999876 4566655555555543322 2246789999998765433 3444 3
Q ss_pred EEC---CCCC-C--CcceE---EecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 91 RKI---PGNE-P--SPMSN---QLTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 91 r~~---~~~~-~--~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
+.. .... . ....+ .+++.+.|.| .|.|.+|....+
T Consensus 241 ~~~~~l~~~~~~~~~~~~L~i~~~~d~G~Y~C--~a~N~~G~~~~~ 284 (304)
T 2yd9_A 241 QGAEDLTPEDDMPVGRNVLELTDVKDSANYTC--VAMSSLGVIEAV 284 (304)
T ss_dssp ETTEECSCSSSCCBSEEEEEECSCCSCEEEEE--EEEETTEEEEEE
T ss_pred ECCEECCCcccccCCcEEEEEcccccCEEEEE--EEEeCCCcEEEE
Confidence 321 1110 0 11122 3445889988 779999987443
No 147
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.78 E-value=1.7e-07 Score=66.58 Aligned_cols=106 Identities=15% Similarity=0.124 Sum_probs=64.8
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceEEEEEEEC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~ 93 (152)
....|.|.+++.+|+|.|+|.|.|. |.....+.|.....|....... .......+.|.|.+.+.++. .+.|.....
T Consensus 54 ~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~ 131 (190)
T 2wv3_A 54 SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHP-EWMWRKKEN 131 (190)
T ss_dssp SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCC-EEEEEEEET
T ss_pred ccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCC-ceEEEEcCC
Confidence 4578999999999999999999999 8877765555332222211110 11235789999998776443 455443212
Q ss_pred CC------CCCC--------cceE-----Ee-cCCCeEEEEEEEEcCCCCCC
Q psy15979 94 PG------NEPS--------PMSN-----QL-TGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 94 ~~------~~~~--------~~~~-----~L-~~~~~Y~~rV~A~N~~G~g~ 125 (152)
+. .... ...+ .+ .+.+.|.| .|.|.+|...
T Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C--~a~N~~g~~~ 181 (190)
T 2wv3_A 132 GVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYEC--NATNSIGSAS 181 (190)
T ss_dssp TEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEE--EEECSSCEEE
T ss_pred CceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEE--EEEecCCcce
Confidence 10 0000 0112 22 45788988 6799999754
No 148
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.78 E-value=5.8e-08 Score=72.27 Aligned_cols=75 Identities=20% Similarity=0.282 Sum_probs=52.1
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeec-CCC--CCCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~-~~~--~~~~~~~~L~W~~~~ 79 (152)
.+|+.+...+...+|.|.+++.+|+|.|+|.|.|..+.... .+.|...+.+|.+.. .+. ......+.|.|.+.+
T Consensus 101 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g 180 (254)
T 2c1o_A 101 PDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNN 180 (254)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred cceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEec
Confidence 37888877777889999999999999999999998764322 455554444444332 111 112458999999876
Q ss_pred C
Q psy15979 80 Y 80 (152)
Q Consensus 80 ~ 80 (152)
.
T Consensus 181 ~ 181 (254)
T 2c1o_A 181 F 181 (254)
T ss_dssp E
T ss_pred c
Confidence 3
No 149
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=98.78 E-value=2.7e-07 Score=67.29 Aligned_cols=118 Identities=14% Similarity=0.184 Sum_probs=75.5
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEe----cCCCCceeecCCCCC-----CCCeEEEEEEecCC--CCcc
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS----GKPNPAIFRSHPQGR-----LPNSYNITWMVSSY--TPLE 84 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~----~~P~p~~~~~~~~~~-----~~~~~~L~W~~~~~--~pi~ 84 (152)
.+.+.+.++.....-.+.+.|.|.+|...+ .+.+. .+|.||......... ...++.|+|..+.. ..+.
T Consensus 67 ~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l 146 (215)
T 1cd9_B 67 NCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQ 146 (215)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEETTEEEECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCE
T ss_pred EEEECCcccccceEEEEEEEEECCCCCccCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEE
Confidence 345556666666666677899999998654 23332 367777654322110 46789999997632 2347
Q ss_pred eEEEEEE-ECCCCCCC--------cceEE---ecCCCeEEEEEEEEcCCCC---CCCCCCccccc
Q psy15979 85 EFKIKYR-KIPGNEPS--------PMSNQ---LTGTNQYQNRRLVRKRFDR---GNSTNGGLIVP 134 (152)
Q Consensus 85 ~y~~~~r-~~~~~~~~--------~~~~~---L~~~~~Y~~rV~A~N~~G~---g~~s~~~~~~~ 134 (152)
.|.|+|+ ......+. ...+. |.+++.|+|||+|+|..|. |+.|....+.+
T Consensus 147 ~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T 211 (215)
T 1cd9_B 147 ECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRP 211 (215)
T ss_dssp EEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred EEEEEEccCCCCCCcEEEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceec
Confidence 9999999 55443322 12333 5569999999999999775 45666555433
No 150
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.78 E-value=1.9e-08 Score=73.49 Aligned_cols=125 Identities=11% Similarity=-0.010 Sum_probs=71.5
Q ss_pred CCcEEEEE-----cCCEeEEEEceeCCCCCEEEEEEEEcCC-CceEEEEEEecC--CCCceeecCCCCCCCCeE-EEEEE
Q psy15979 6 TERRIMET-----RGSRHTLMIRKVVASDFGNYSCEATNPM-GKHRAYLELSGK--PNPAIFRSHPQGRLPNSY-NITWM 76 (152)
Q Consensus 6 ~~r~~i~~-----~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~~~v~~~--P~p~~~~~~~~~~~~~~~-~L~W~ 76 (152)
.+|+.+.. .....+|.|.+++.+|+|.|+|.+.|.. |.....+.|... |......... ......+ .|.|.
T Consensus 61 ~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~-~~~g~~~~~l~C~ 139 (221)
T 3eow_R 61 SKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKV-QLTGEPVPMARCV 139 (221)
T ss_dssp CSSCEEESSCSSCCCCCCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECC-CCCSSSCCEEEEE
T ss_pred CCcEEEecccCCCCCCCceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCc-ccCCceEEEEEEE
Confidence 46677764 2246789999999999999999999987 777776555543 3322222111 1334566 59999
Q ss_pred ecCCCCcceEEEEEEECCCCC---------CC----cceEEecC-----CCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 77 VSSYTPLEEFKIKYRKIPGNE---------PS----PMSNQLTG-----TNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 77 ~~~~~pi~~y~~~~r~~~~~~---------~~----~~~~~L~~-----~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
+.+..|...+.| ++...... .. ...+.|.. ++.|.| .|.|..+...-+....+.|
T Consensus 140 ~~~g~P~p~v~W-~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC--~a~n~~~~~~~~~~v~~~~ 212 (221)
T 3eow_R 140 STGGRPPAQITW-HSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTC--KVEHESFEKPQLLTVSLTV 212 (221)
T ss_dssp EESCSSCCCEEE-ECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEE--EECCSCSSSCEEEEECCCC
T ss_pred CCCccCCCeeEE-EeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEE--EEECCCCCCCeEEEEEEEE
Confidence 763333334444 33211100 00 01233333 789999 5688876543333333344
No 151
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.78 E-value=7.3e-09 Score=66.27 Aligned_cols=42 Identities=21% Similarity=0.474 Sum_probs=35.7
Q ss_pred EEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 10 IMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 10 ~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.+......+.|.|.+++.+|+|.|+|.|+|.+|.++..+.|.
T Consensus 50 ~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~ 91 (93)
T 1wit_A 50 LVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVI 91 (93)
T ss_dssp EEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEE
Confidence 333445678999999999999999999999999998887764
No 152
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.77 E-value=9.8e-08 Score=71.89 Aligned_cols=114 Identities=10% Similarity=0.019 Sum_probs=69.5
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCc----eEEEEEEecCCCCceeecCCC--CCCCCeEEEEEEecCCCCcceEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGK----HRAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEFKIK 89 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~----~~~~~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~pi~~y~~~ 89 (152)
....|.|.+++.+|+|.|+|.+.|..|. +...+.|.+.+.+|.+...+. ....+.++|.|...+..+ .|.|
T Consensus 58 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~--~~~w- 134 (242)
T 1p6f_A 58 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATS--MFLL- 134 (242)
T ss_dssp CEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCS--EEEE-
T ss_pred ceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCCCC--EEEE-
Confidence 5678999999999999999999997653 234566665443444332221 124689999999865433 4544
Q ss_pred EEECCCCC------CCcceEE-----ecCCCeEEEEEEEEcC-CCCCCCCCCccccc
Q psy15979 90 YRKIPGNE------PSPMSNQ-----LTGTNQYQNRRLVRKR-FDRGNSTNGGLIVP 134 (152)
Q Consensus 90 ~r~~~~~~------~~~~~~~-----L~~~~~Y~~rV~A~N~-~G~g~~s~~~~~~~ 134 (152)
|+.-.... .....+. ..+.+.|.|. |.|. ++++.+++...+++
T Consensus 135 ~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~--a~n~~~~~s~~S~~~~l~V 189 (242)
T 1p6f_A 135 LKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCF--GSYNNHAWSFPSEPVKLLV 189 (242)
T ss_dssp EECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEE--EEEETTEECCCCCCEEEEE
T ss_pred EECCCccCccccCCCceEEEEeCCCccccCEEEEEE--EECCCCcccCCCCCEEEEE
Confidence 44321110 1112233 3348999995 5554 56777777664433
No 153
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.77 E-value=2e-08 Score=72.23 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=65.8
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcc
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLE 84 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~ 84 (152)
+|+.+. ..+++|.|.+++.+|+|.|+|.+.|.. ..... +.|..++..|.+.. ....+.|.|.+..+ |..
T Consensus 60 ~R~~l~--~~~~sL~I~~v~~~D~G~Y~C~v~~~~-~~~~~~~L~V~~~~~~P~i~~-----~~~~v~L~C~~~~g-p~p 130 (180)
T 2dru_A 60 DRVDLD--KTNGALRIYNVSKEDRGDYYMRMLHET-EDQWKITMEVYEMVSKPMIYW-----ECSNATLTCEVLEG-TDV 130 (180)
T ss_dssp TTEEEC--TTTCCEEECSCCGGGCEEEEEEEESSS-EEEEEEEEEEECCCCCCEEEE-----EGGGTEEEEECSSC-TTC
T ss_pred CeEEEe--CCCccEEEcCCCHHHCeEEEEEEEcCC-eEEEEEEEEEECCCCCCEEEe-----cCCCEEEEEEeCCC-CCC
Confidence 677772 245679999999999999999998876 44443 44445444344332 12458999998443 444
Q ss_pred eEEEEEEECCC-CCCCcceEEe---cCCCeEEEEEEEEcCCCCCC
Q psy15979 85 EFKIKYRKIPG-NEPSPMSNQL---TGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 85 ~y~~~~r~~~~-~~~~~~~~~L---~~~~~Y~~rV~A~N~~G~g~ 125 (152)
.+.|. +.... .......+.+ .+.+.|+| .|.|.+|...
T Consensus 131 ~i~W~-~~~~~l~~~~~~~l~~~~~~d~g~Y~C--~a~N~~~~~~ 172 (180)
T 2dru_A 131 ELKLY-QGKEHLRSLRQKTMSYQWTNLRAPFKC--KAVNRVSQES 172 (180)
T ss_dssp EEEEE-ETTEEEEEESSSEEEEECSCCSSCEEE--EEEETTEEEE
T ss_pred EEEEE-ECCeECcCCCCCEEEEEEhhcCccEEE--EEecCcCccc
Confidence 55553 32100 0011122333 45899999 7799998654
No 154
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=98.77 E-value=4.2e-08 Score=64.51 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=58.6
Q ss_pred cCCCCceeec-CCCCCCCCeEEEEEEecC--CCCcceEEEEEEECCCCCCC-----cceEE---ecCCCeEEEEEEEEcC
Q psy15979 52 GKPNPAIFRS-HPQGRLPNSYNITWMVSS--YTPLEEFKIKYRKIPGNEPS-----PMSNQ---LTGTNQYQNRRLVRKR 120 (152)
Q Consensus 52 ~~P~p~~~~~-~~~~~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~~~-----~~~~~---L~~~~~Y~~rV~A~N~ 120 (152)
+.|.||.... .......+++.|+|..+. ..+|..|.|+|+......+. ...+. |.+++.|.|||.|.|.
T Consensus 6 ~~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~ 85 (108)
T 2dm4_A 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRAASNFTEIKNLLVNTLYTVRVAAVTS 85 (108)
T ss_dssp CCTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEESSSEEEECSCCSSCEEEEEEEEEES
T ss_pred CCCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecCCccEEEeCCCCCCCEEEEEEEEECC
Confidence 4566665442 111235689999999853 45789999999987654321 23444 5559999999999999
Q ss_pred CCCCCCCCCccccc
Q psy15979 121 FDRGNSTNGGLIVP 134 (152)
Q Consensus 121 ~G~g~~s~~~~~~~ 134 (152)
.|.|.++....+.+
T Consensus 86 ~G~g~~S~~~~~~T 99 (108)
T 2dm4_A 86 RGIGNWSDSKSITT 99 (108)
T ss_dssp SCEEEECCCEEEEC
T ss_pred CceeCCCCCEEEEC
Confidence 99999988765544
No 155
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.77 E-value=2e-08 Score=76.59 Aligned_cols=120 Identities=13% Similarity=0.206 Sum_probs=68.7
Q ss_pred CcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcC-CCceEEEEEEe--cCCCCceeecCC--CCCCCCeEEEEEEecCC
Q psy15979 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNP-MGKHRAYLELS--GKPNPAIFRSHP--QGRLPNSYNITWMVSSY 80 (152)
Q Consensus 7 ~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~-~G~~~~~~~v~--~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~ 80 (152)
+|+.+.. .....+|.|.+++.+|+|.|+|.|.|. .|..+..+.+. ..|.++...... .......+.|.|...++
T Consensus 62 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g 141 (308)
T 4fom_A 62 GRVLFKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATG 141 (308)
T ss_dssp TTEEESCCSSSBCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEE
T ss_pred ceEEeeccCCCceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCC
Confidence 4444432 224567999999999999999999996 66666654444 444333332221 12235678888876443
Q ss_pred CCcceEEEEEEECCCCC------C-Cc----ceEEe-----cCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 81 TPLEEFKIKYRKIPGNE------P-SP----MSNQL-----TGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 81 ~pi~~y~~~~r~~~~~~------~-~~----~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
.|...+.|. +....-. . .. ..+.| .+++.|.| .|.|..|.+..+..
T Consensus 142 ~P~~~i~W~-~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C--~a~n~~~~~~~~~~ 203 (308)
T 4fom_A 142 KPVAHIDWE-GDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITC--VVKHPALEKDIRYS 203 (308)
T ss_dssp BSCCEEEEC-CCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEE--EEECTTCSSCEEEE
T ss_pred cCCceEEEE-ECCcccccccceeeeecccccccceEEeeeecCCccEEE--EEEccCCCCceEEe
Confidence 444445543 2211100 0 00 12233 34889998 56898887765443
No 156
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.76 E-value=9e-09 Score=72.87 Aligned_cols=103 Identities=11% Similarity=0.064 Sum_probs=65.1
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC-CCCCCeEEEEEEecCCCCcceEEEEEEECC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPLEEFKIKYRKIP 94 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~-~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~ 94 (152)
....|.|.+++.+|+|.|+|.|.|..++....+.|.. .+........ ......+.|.|.+.+..|...+.|. +...
T Consensus 52 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~l~V~~--~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~-k~g~ 128 (175)
T 1fnl_A 52 QASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHI--GWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYL-QNGK 128 (175)
T ss_dssp SCSEEEESSCCGGGCEEEEEECSSSCCCCCEEEEEEC--SSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEE-ETTE
T ss_pred CceEEEEeCCCcccCEEEEEEeeCCcccccEEEEEeC--CCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEE-ECCe
Confidence 4578999999999999999999998887777777663 2222222111 1246789999998876555455543 3210
Q ss_pred CCC--CCcceEE-----ecCCCeEEEEEEEEcCCCC
Q psy15979 95 GNE--PSPMSNQ-----LTGTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 95 ~~~--~~~~~~~-----L~~~~~Y~~rV~A~N~~G~ 123 (152)
.-. .....+. .++.+.|.| .|.|..|.
T Consensus 129 ~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~~~ 162 (175)
T 1fnl_A 129 DRKYFHHNSDFHIPKATLKDSGSYFC--RGLVGSKN 162 (175)
T ss_dssp EEEEEEECCCEEESSCCGGGCEEEEE--EEEETTEE
T ss_pred EccCCCCCCEEEEcccChhhCeEEEE--EEEcCCCC
Confidence 000 0112233 344889998 66887664
No 157
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.76 E-value=1.6e-08 Score=79.47 Aligned_cols=106 Identities=17% Similarity=0.177 Sum_probs=67.5
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC---CCCCCeEEEEEEecCCCCcceEEEEEEEC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~pi~~y~~~~r~~ 93 (152)
.+.|.|.+++.+|+|.|+|.|.|..|.....+.|.....| .+...+. ......+.|.|.+.+.++. .+.|. +..
T Consensus 274 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p-~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~v~W~-~~g 350 (404)
T 3p3y_A 274 NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKP-TVQWM-VNG 350 (404)
T ss_dssp GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEE-EEEECCCCEEECTTCCEEEECEEEEESCC-EEEEE-ETT
T ss_pred CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCC-eeeccCCcceeecCCcEEEEEEccccCCC-ceEEE-ECC
Confidence 4689999999999999999999999998887666543322 2221111 1235789999998776443 35543 321
Q ss_pred ---CCCC--C----CcceEE-----ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 94 ---PGNE--P----SPMSNQ-----LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 94 ---~~~~--~----~~~~~~-----L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.... . ....+. ..+.+.|.| .|.|.+|....+
T Consensus 351 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~~ 396 (404)
T 3p3y_A 351 EPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC--NTSNEHGYLLAN 396 (404)
T ss_dssp EEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEE--EEEETTEEEEEE
T ss_pred EecCCCCCCceEEecCCEEEEeecCHHHCEEEEE--EEEeCCCcEEEE
Confidence 1010 0 012233 334889988 779999976543
No 158
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=98.76 E-value=5.4e-09 Score=71.41 Aligned_cols=70 Identities=11% Similarity=0.035 Sum_probs=49.2
Q ss_pred CCCCCeEEEEEEecCC------CC-cceEEEEEEECCCCCCC------cceE---EecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 65 GRLPNSYNITWMVSSY------TP-LEEFKIKYRKIPGNEPS------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 65 ~~~~~~~~L~W~~~~~------~p-i~~y~~~~r~~~~~~~~------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
....+++.|.|..+.. .+ |..|.|+.+......+. ...+ .|.+++.|.|||.|.|..|.|+++.
T Consensus 26 ~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~ 105 (120)
T 1wfu_A 26 KVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSP 105 (120)
T ss_dssp CEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEEEECSSSCEEECC
T ss_pred eEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEecCCccEEEECCCCCCCEEEEEEEEECCCCCCCCCc
Confidence 3457999999997532 34 88999994322222211 1223 4667999999999999999999988
Q ss_pred Cccccc
Q psy15979 129 GGLIVP 134 (152)
Q Consensus 129 ~~~~~~ 134 (152)
...+.+
T Consensus 106 ~~~~~T 111 (120)
T 1wfu_A 106 VVSVAT 111 (120)
T ss_dssp CEEEEC
T ss_pred cEeeEc
Confidence 765543
No 159
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=1.9e-08 Score=65.32 Aligned_cols=49 Identities=20% Similarity=0.476 Sum_probs=40.2
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P 54 (152)
+|..+.|+.+. ...|.|.+++.+|+|.|+|+|.|..|.....+.|....
T Consensus 42 ~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 90 (99)
T 2cr3_A 42 QLAESNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSD 90 (99)
T ss_dssp BCCCCSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBCS
T ss_pred ECCCCCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEec
Confidence 45556677764 35899999999999999999999999998887776543
No 160
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=98.76 E-value=1e-07 Score=63.41 Aligned_cols=70 Identities=17% Similarity=0.198 Sum_probs=52.6
Q ss_pred CCCCeEEEEEEec----CCCCcceEEEEEEECCCCC---C-------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 66 RLPNSYNITWMVS----SYTPLEEFKIKYRKIPGNE---P-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 66 ~~~~~~~L~W~~~----~~~pi~~y~~~~r~~~~~~---~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
...+++.|+|..+ .+.+|..|.|+|+...... . ....+. |.+++.|.|+|.|.|..|.|.++.
T Consensus 20 ~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 99 (114)
T 1x4y_A 20 VNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSN 99 (114)
T ss_dssp SSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEEEECTTCCCCCCC
T ss_pred cCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEEEEEEcCCccCCCcC
Confidence 3568999999976 3458999999998765431 1 112343 556999999999999999999998
Q ss_pred Ccccccc
Q psy15979 129 GGLIVPK 135 (152)
Q Consensus 129 ~~~~~~~ 135 (152)
...+.+.
T Consensus 100 ~v~~~T~ 106 (114)
T 1x4y_A 100 VMICETK 106 (114)
T ss_dssp CEEEECC
T ss_pred CEEEEeC
Confidence 7766554
No 161
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=98.76 E-value=8.2e-08 Score=75.01 Aligned_cols=97 Identities=11% Similarity=0.110 Sum_probs=65.2
Q ss_pred EEEEEEEcCCCceEEEEEEe----cCCCCceeecCCCCCCCCeEEEEEEecC--CCCc----ceEEEEEEECCCCCCC--
Q psy15979 32 NYSCEATNPMGKHRAYLELS----GKPNPAIFRSHPQGRLPNSYNITWMVSS--YTPL----EEFKIKYRKIPGNEPS-- 99 (152)
Q Consensus 32 ~YtC~A~N~~G~~~~~~~v~----~~P~p~~~~~~~~~~~~~~~~L~W~~~~--~~pi----~~y~~~~r~~~~~~~~-- 99 (152)
.++|.|.|.+|.......+. ++|.||.............+.|+|..+. ..|. +.|.|+||..+...+.
T Consensus 187 ~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~ 266 (306)
T 3d85_D 187 EVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDR 266 (306)
T ss_dssp EEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CE
T ss_pred EEEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCccEEE
Confidence 35899999999876665443 6898886442211112378999999853 2333 6899999986543211
Q ss_pred ----cceEEecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 100 ----PMSNQLTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 100 ----~~~~~L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
..++.|..++.|+|||+|+|..|.|..|+
T Consensus 267 ~~~~~ts~~l~~~~~Y~vqVRa~~~~~~G~WSe 299 (306)
T 3d85_D 267 VFTDKTSATVICRKNASISVRAQDRYYSSSWSE 299 (306)
T ss_dssp EEESSSEEEECCCSSCEEEEEEEESSSCCCCCC
T ss_pred eeccccEEEEeCCCeEEEEEEeccCCCCCCCCC
Confidence 24678888999999999999999887764
No 162
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.75 E-value=3.5e-08 Score=71.38 Aligned_cols=83 Identities=18% Similarity=0.220 Sum_probs=56.8
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc-----eEEEEEEecCCCCceeecCCC---CCCCCeEEEEEEe
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK-----HRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMV 77 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~-----~~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~ 77 (152)
++||.+...+...+|.|.+++.+|+|.|+|.|.|..|. ....+.|...+.+|.+...+. ......+.|.|.+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~ 138 (213)
T 3nl4_L 59 PSRFKGSGSGTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVA 138 (213)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEE
T ss_pred CccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEE
Confidence 57888887777889999999999999999999998773 122455555455554432211 1135789999998
Q ss_pred cCCCCcceEEE
Q psy15979 78 SSYTPLEEFKI 88 (152)
Q Consensus 78 ~~~~pi~~y~~ 88 (152)
.+..|...+.|
T Consensus 139 ~g~~P~~~v~W 149 (213)
T 3nl4_L 139 NKYFPDVTVTW 149 (213)
T ss_dssp EEEBSCCEEEE
T ss_pred ecccCCcEEEE
Confidence 77334334444
No 163
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.75 E-value=2e-08 Score=72.15 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=59.9
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEE-EEecCCCCcee--ecCCCCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYL-ELSGKPNPAIF--RSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~-~v~~~P~p~~~--~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
...+|.|.+++.+|+|.|+|.|.|..|...... .+...+.|... .............+.+...+..|...+.| ++.
T Consensus 81 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w-~~~ 159 (225)
T 4fmk_A 81 RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITW-ISS 159 (225)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEE-ECS
T ss_pred CcEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEE-EEC
Confidence 456799999999999999999999888666532 22222222221 11111223455556665543333333333 222
Q ss_pred CCCC---------CCCc----ceEEecC-----CCeEEEEEEEEcCCCCCCCCCC
Q psy15979 93 IPGN---------EPSP----MSNQLTG-----TNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 93 ~~~~---------~~~~----~~~~L~~-----~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
.... ..+. ..+.|.+ ++.|.| .|.|..|...-+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC--~a~N~~~~~~~~~~ 212 (225)
T 4fmk_A 160 LGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTC--RVEHESFEEPILLP 212 (225)
T ss_dssp SCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEE--EEECTTCSSCEEEE
T ss_pred CccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEE--EEEcCCCCeEEEEE
Confidence 1110 0111 1234433 789999 66898887654433
No 164
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.75 E-value=4.9e-08 Score=80.03 Aligned_cols=107 Identities=18% Similarity=0.095 Sum_probs=66.7
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec--CCCCceeecC---CCCCCCCeEEEEEEecCCCCcceEEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSH---PQGRLPNSYNITWMVSSYTPLEEFKIKY 90 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~--~P~p~~~~~~---~~~~~~~~~~L~W~~~~~~pi~~y~~~~ 90 (152)
..+.|.|.+++.+|+|.|+|+|.|..|.....+.|.. +|........ ........+.|.|.+.+.++...+.|.
T Consensus 271 ~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~- 349 (524)
T 2ec8_A 271 RQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWI- 349 (524)
T ss_dssp EEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEE-
T ss_pred eEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEE-
Confidence 4678999999999999999999999999888766554 3322111110 011235789999998776543324443
Q ss_pred EECCC-CCC--------------CcceEEecC-----CCeEEEEEEEEcCCCCCC
Q psy15979 91 RKIPG-NEP--------------SPMSNQLTG-----TNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 91 r~~~~-~~~--------------~~~~~~L~~-----~~~Y~~rV~A~N~~G~g~ 125 (152)
+.... ... ....+.|.. .+.|.| .|.|.+|...
T Consensus 350 k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~g~~~ 402 (524)
T 2ec8_A 350 YMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTF--LVSNSDVNAA 402 (524)
T ss_dssp SSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEE--EEECSSCEEE
T ss_pred ECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEE--EEEecCceEE
Confidence 22110 000 012333433 788988 6799999753
No 165
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.75 E-value=2.8e-08 Score=80.53 Aligned_cols=106 Identities=11% Similarity=0.049 Sum_probs=60.6
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC-CCCCCCeEEEEEEecCCCCcceEEEEEEECCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~-~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~ 95 (152)
..+|.|.+|+.+|+|.|+|.|.|..|.....+.|...+.|......+ .......+.|.|.+.+.++ ..+.|. +....
T Consensus 102 ~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~-P~i~W~-k~~~~ 179 (423)
T 3qs7_E 102 VVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPE-PIVEWV-LCDSQ 179 (423)
T ss_dssp EEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSC-CEEEEE-EC---
T ss_pred EEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccCCceEEEEEEeeecC-CeEEEE-ECCCC
Confidence 34699999999999999999999999988877776553332111111 0112355678999877643 334443 32111
Q ss_pred CC------CC-----cceEEecCCCeEEEEEEEEcCCCCCCC
Q psy15979 96 NE------PS-----PMSNQLTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 96 ~~------~~-----~~~~~L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
.. .. .......+.+.|+| .|.|.+|....
T Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C--~A~N~~G~~~~ 219 (423)
T 3qs7_E 180 GESCKEESPAVVKKEEKVLHELFGTDIRC--CARNELGRECT 219 (423)
T ss_dssp ----------CEEECCSEECCCCSSCEEE--EEECSSCEEEE
T ss_pred CccccccccccccccceEEecccCeEEEE--EEEcCCCCcce
Confidence 00 00 01112334788998 78999997543
No 166
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.75 E-value=1.2e-08 Score=76.92 Aligned_cols=118 Identities=14% Similarity=0.151 Sum_probs=71.2
Q ss_pred ccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecC-CCCceeecCCC---CCCCCeEEEEE
Q psy15979 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGK-PNPAIFRSHPQ---GRLPNSYNITW 75 (152)
Q Consensus 3 l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~-P~p~~~~~~~~---~~~~~~~~L~W 75 (152)
+..+.++.+... ..|.|.+++.+|+|.|+|.|.|..|.... .+.|... +.||.+...+. ......+.|.|
T Consensus 132 ~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C 208 (292)
T 4dkd_C 132 LMRHTNYSFSPW---HGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVC 208 (292)
T ss_dssp CCSSCCEECCSS---SCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEE
T ss_pred cccCCcccccCC---ceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEE
Confidence 344556665433 34999999999999999999999886644 3444432 23444433321 12468899999
Q ss_pred EecCCCCcceEEEEEEECCCCCC--C------c-----ceEEec-----CCCeEEEEEEEEcCCCCCCCC
Q psy15979 76 MVSSYTPLEEFKIKYRKIPGNEP--S------P-----MSNQLT-----GTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 76 ~~~~~~pi~~y~~~~r~~~~~~~--~------~-----~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.+.+.++. +.+++...+.... . . ..+.|. +.+.|.| .|.|.+|....+
T Consensus 209 ~~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~g~~~~~ 274 (292)
T 4dkd_C 209 SASSVDVN--FDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSC--VASNVQGKHSTS 274 (292)
T ss_dssp EEEESSSC--CEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEE--EEECSSCEEEEE
T ss_pred EecCCCCc--eEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEE--EEecCCCCceeE
Confidence 98765442 2333333222111 0 0 123333 3789988 679999985433
No 167
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.74 E-value=1e-08 Score=66.94 Aligned_cols=48 Identities=23% Similarity=0.336 Sum_probs=34.2
Q ss_pred ccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 3 l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
|..+.++.+. ...+.|.|.+++.+|+|.|+|.|.|..|.+...+.|..
T Consensus 51 ~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 98 (108)
T 3kvq_A 51 LVEDSGIVLK--DGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 98 (108)
T ss_dssp CCCBTTEEEE--TTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEE
T ss_pred cccCCCeEEe--CCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEE
Confidence 4445666664 33468999999999999999999999999988766553
No 168
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=1.1e-07 Score=62.79 Aligned_cols=68 Identities=15% Similarity=0.140 Sum_probs=51.1
Q ss_pred CCCeEEEEEEecC--CCCcceEEEEEEECCCCC---C-------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCcc
Q psy15979 67 LPNSYNITWMVSS--YTPLEEFKIKYRKIPGNE---P-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGL 131 (152)
Q Consensus 67 ~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~---~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~ 131 (152)
..+++.|+|..+. +.+|..|.|+|+...... + ....+. |.+++.|.|||.|.|..|.|.++....
T Consensus 23 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~ 102 (114)
T 2ede_A 23 KPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPIL 102 (114)
T ss_dssp CSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEE
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEE
Confidence 4689999999753 347899999998754321 1 113343 566999999999999999999998776
Q ss_pred ccc
Q psy15979 132 IVP 134 (152)
Q Consensus 132 ~~~ 134 (152)
+..
T Consensus 103 ~~T 105 (114)
T 2ede_A 103 FRT 105 (114)
T ss_dssp EEC
T ss_pred EEe
Confidence 644
No 169
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.74 E-value=1.3e-08 Score=79.85 Aligned_cols=107 Identities=16% Similarity=0.239 Sum_probs=64.6
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEecCCCCceeecCCC----CCCCCeEEEEEEecCCCCcceEEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELSGKPNPAIFRSHPQ----GRLPNSYNITWMVSSYTPLEEFKIKY 90 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~~~P~p~~~~~~~~----~~~~~~~~L~W~~~~~~pi~~y~~~~ 90 (152)
....|.|.+++.+|+|.|+|.|.|..|.... .+.|.... +|.+...+. ......+.|.|.+.+.++. .+.|..
T Consensus 268 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~-~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~v~W~~ 345 (395)
T 1bih_A 268 SGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS-APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAP-NVVWSH 345 (395)
T ss_dssp TTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEE-EEEEEECCCSEEEECTTSCEEEECEEEEESCC-CCEEEE
T ss_pred CCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEc-CCccccCCCcceEecCCCeEEEEEEECcccCC-eeEEEE
Confidence 3458999999999999999999999999765 54444321 122222111 1235789999998765433 344432
Q ss_pred E--ECCCCC--CCcceEEe-----cCCCeEEEEEEEEcCCCCCCC
Q psy15979 91 R--KIPGNE--PSPMSNQL-----TGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 91 r--~~~~~~--~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
. ...... .....+.| .+.+.|.| .|.|.+|....
T Consensus 346 ~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~G~~~~ 388 (395)
T 1bih_A 346 NAKPLSGGRATVTDSGLVIKGVKNGDKGYYGC--RATNEHGDKYF 388 (395)
T ss_dssp TTEECCSSSEEEETTEEEESSCCSTTCEEEEE--EEEETTEEEEE
T ss_pred CCEECCCCceEEECCEEEEeeCCcccCEEEEE--EEEccCCCceE
Confidence 1 111110 00113333 33788988 77999997643
No 170
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.74 E-value=2.1e-08 Score=86.35 Aligned_cols=123 Identities=15% Similarity=0.147 Sum_probs=76.7
Q ss_pred ccCCCcEEEE-EcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCC---CCCCeEEEEEEec
Q psy15979 3 LETTERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQG---RLPNSYNITWMVS 78 (152)
Q Consensus 3 l~~~~r~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~---~~~~~~~L~W~~~ 78 (152)
|..+.++.+. ..+..+.|.|.+++.+|+|.|+|.|.|..|.....+.|...- ||.+...+.. .....+.|.|.+.
T Consensus 661 l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~-~P~~~~~~~~~~v~~G~~v~l~C~~~ 739 (816)
T 3dmk_A 661 ISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYV-PPRWILEPTDKAFAQGSDAKVECKAD 739 (816)
T ss_dssp CCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEE-EEEEEECCCCEEEETTCCEEEECEEE
T ss_pred cCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEe-CCceeeecccceecCCCcEEEEEEEe
Confidence 3334444443 244678899999999999999999999999998876665432 2233222211 2357889999987
Q ss_pred CCCCcceEEEEEEECCCC----C---CC------cceEEec-----CCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 79 SYTPLEEFKIKYRKIPGN----E---PS------PMSNQLT-----GTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 79 ~~~pi~~y~~~~r~~~~~----~---~~------~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
+.++. .+.|. +..... . .. ..++.|. +.+.|.| .|.|.+|.+..+...
T Consensus 740 g~P~p-~i~W~-k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~~v~~ 805 (816)
T 3dmk_A 740 GFPKP-QVTWK-KAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLC--EAINGIGSGLSAVIM 805 (816)
T ss_dssp EESCC-EEECC-EECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEE--EEECSSSSCEEEEEE
T ss_pred cCCCC-eEEEE-ecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEEEE--EEEeCCCCCcEEEEE
Confidence 76443 34443 321110 0 00 1123333 3789988 789999998665433
No 171
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.74 E-value=2.2e-08 Score=65.81 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=52.6
Q ss_pred CCCeEEEEEEecC--CCCcceEEEEEEECCCCCCC-------cceE---EecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 67 LPNSYNITWMVSS--YTPLEEFKIKYRKIPGNEPS-------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 67 ~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~~~-------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
..+++.|.|..+. +.+|..|.|+|+........ ...+ .|.+++.|.|||.|.|..|.|.+|....+..
T Consensus 20 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 99 (108)
T 2djs_A 20 TMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQT 99 (108)
T ss_dssp CSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEEC
T ss_pred CCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEEecCccEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEe
Confidence 4689999999853 35788999999987643311 1233 4666999999999999999999988776654
Q ss_pred c
Q psy15979 135 K 135 (152)
Q Consensus 135 ~ 135 (152)
.
T Consensus 100 ~ 100 (108)
T 2djs_A 100 L 100 (108)
T ss_dssp C
T ss_pred C
Confidence 4
No 172
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.74 E-value=4e-08 Score=71.68 Aligned_cols=62 Identities=13% Similarity=0.016 Sum_probs=37.3
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCcee-ecCCC---CCCCCeEEEEEEecCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIF-RSHPQ---GRLPNSYNITWMVSSY 80 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~-~~~~~---~~~~~~~~L~W~~~~~ 80 (152)
..|.|.+++.+|+|.|+|.|.|..+...+ .+.|.. +.++.+ ...+. ......+.|.|.+.+.
T Consensus 64 ~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~-~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~ 132 (213)
T 2x1w_L 64 KGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG-YRIYDVVLSPSHGIELSVGEKLVLNCTARTE 132 (213)
T ss_dssp TEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECB-CCEEEEEEESCSCEEEETTCCEEEEEEEEEC
T ss_pred ccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeC-CcccceEEcCCCCeEEcCCCCEEEEEEEECC
Confidence 46999999999999999999996554443 233333 222222 22211 1246788999988753
No 173
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.73 E-value=1.2e-08 Score=65.73 Aligned_cols=46 Identities=22% Similarity=0.542 Sum_probs=38.4
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..+.|+.+. .+.|.|.+++.+|+|.|+|+|.|..|.....+.|.
T Consensus 48 ~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 93 (95)
T 2ckn_A 48 QLVESNRTRIT----GEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVN 93 (95)
T ss_dssp CCCCCSSEEEC----SSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEE
T ss_pred ecCCCCCEEEe----CCEEEECCCChHHCEEEEEEeccCCCcEEEEEEEE
Confidence 45566777774 45899999999999999999999999988877664
No 174
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.73 E-value=2e-07 Score=68.51 Aligned_cols=85 Identities=12% Similarity=0.139 Sum_probs=49.1
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCce-------EEEEEEecCCC---C------ceeecCCC---C
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKH-------RAYLELSGKPN---P------AIFRSHPQ---G 65 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-------~~~~~v~~~P~---p------~~~~~~~~---~ 65 (152)
.+|+.+.. .....+|.|.+++.+|+|.|+|.|.|..|.. ...+.|...+. | +.+...+. .
T Consensus 60 ~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v 139 (238)
T 2p1y_A 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTV 139 (238)
T ss_dssp CTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEE
T ss_pred cceEEEEccCCceEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEE
Confidence 45777764 3456789999999999999999999987631 12344444332 1 01111111 1
Q ss_pred CCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 66 RLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.....+.|.|.+.+.++ . ...||+.
T Consensus 140 ~~G~~v~L~C~~~~~p~-~-~i~W~k~ 164 (238)
T 2p1y_A 140 WEGETAILNCSYENSAF-D-YFPWYQQ 164 (238)
T ss_dssp ETTSCEEEEEECCCTTC-C-EEEEEEE
T ss_pred eCCCeEEEEEEEecCCC-C-cEEEEEE
Confidence 24678999999876533 2 2334554
No 175
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.73 E-value=3.5e-08 Score=76.24 Aligned_cols=73 Identities=19% Similarity=0.225 Sum_probs=47.7
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc----eEEE--EEEecCC--CCceeecCCC---CCCCCeEEEEE
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK----HRAY--LELSGKP--NPAIFRSHPQ---GRLPNSYNITW 75 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~----~~~~--~~v~~~P--~p~~~~~~~~---~~~~~~~~L~W 75 (152)
.++.+.. ..+.|.|.+++.+|+|.|+|+|.|..|. .... +.|...+ .||.+...+. ......+.|.|
T Consensus 171 ~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C 248 (339)
T 3o4o_C 171 EKFLSVR--GTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPC 248 (339)
T ss_dssp SSEEECT--TSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCC
T ss_pred ceeEEcC--CcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEE
Confidence 5666642 3358999999999999999999999983 3444 4444333 2344433221 12357788888
Q ss_pred Ee---cCCC
Q psy15979 76 MV---SSYT 81 (152)
Q Consensus 76 ~~---~~~~ 81 (152)
.+ .+.+
T Consensus 249 ~~~~~~g~P 257 (339)
T 3o4o_C 249 KVFLGTGTP 257 (339)
T ss_dssp CEEESSSCC
T ss_pred EEECCCCCC
Confidence 88 5554
No 176
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.73 E-value=6.7e-08 Score=64.46 Aligned_cols=82 Identities=13% Similarity=0.087 Sum_probs=57.1
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecC---CCCcceEEEEEEECCCCCC--------CcceEE---ecCCCeEEEEEEE
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSS---YTPLEEFKIKYRKIPGNEP--------SPMSNQ---LTGTNQYQNRRLV 117 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~~~~--------~~~~~~---L~~~~~Y~~rV~A 117 (152)
..|.+|..... .....+++.|.|..+. +.+|..|.|+|+....... ....+. |.+++.|+|||.|
T Consensus 16 ~~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 94 (120)
T 1x5f_A 16 PLPSAPRDVVA-SLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMA 94 (120)
T ss_dssp CCCCCCEEEEE-EEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCCCcEE-EecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEEEE
Confidence 45555543321 1234678999999754 3588999999998754321 123444 5669999999999
Q ss_pred EcCCCCCCCCCCccccc
Q psy15979 118 RKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 118 ~N~~G~g~~s~~~~~~~ 134 (152)
.|..|.|.++....+.+
T Consensus 95 ~n~~G~g~~S~~~~~~T 111 (120)
T 1x5f_A 95 QNKHGSGESSAPLRVET 111 (120)
T ss_dssp ECSSCEEEECCCEEEEC
T ss_pred ECCCccCCCCCCEEEEe
Confidence 99999999988766554
No 177
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.73 E-value=1.1e-07 Score=73.25 Aligned_cols=74 Identities=15% Similarity=0.271 Sum_probs=51.6
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCce-------EEEEEEecCCCCceeecCCC-CCCCCeEEEEEEecCCCCc-ce
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKH-------RAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPL-EE 85 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-------~~~~~v~~~P~p~~~~~~~~-~~~~~~~~L~W~~~~~~pi-~~ 85 (152)
.....|.|.+++.+|+|.|+|.|.|..|.. ...+.|...|.++.+..... ......+.|.|.+.+.+|. ..
T Consensus 71 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~ 150 (327)
T 2wng_A 71 NMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 150 (327)
T ss_dssp CCBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCE
T ss_pred CceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcE
Confidence 446689999999999999999999997752 23566667777665542211 2346789999998765433 24
Q ss_pred EEE
Q psy15979 86 FKI 88 (152)
Q Consensus 86 y~~ 88 (152)
+.|
T Consensus 151 v~W 153 (327)
T 2wng_A 151 LKW 153 (327)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 178
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.73 E-value=1.2e-07 Score=78.45 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=54.9
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC---CCCCCeEEEEEEecCC
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSY 80 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~ 80 (152)
++|+.+.. .++...|.|.+++.+|+|.|+|.|.|..|.....+.|.....|. +...+. ......+.|.|.+.+.
T Consensus 61 ~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~-~~~~~~~~~v~~G~~v~l~C~~~~~ 139 (585)
T 2ocw_A 61 AGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPG-LLNDTKVYTVDLGRTVTINCPFKTE 139 (585)
T ss_pred eceEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCcc-ccCCCccEEEEcCCCEEEEEEecCC
Confidence 35777764 34456899999999999999999999999877766665433222 111111 1245789999998765
Q ss_pred CCcceEEE
Q psy15979 81 TPLEEFKI 88 (152)
Q Consensus 81 ~pi~~y~~ 88 (152)
.+...+.|
T Consensus 140 ~~~~~v~W 147 (585)
T 2ocw_A 140 NAQKRKSL 147 (585)
T ss_pred CCCccEEE
Confidence 44333433
No 179
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.72 E-value=9.5e-09 Score=83.35 Aligned_cols=112 Identities=12% Similarity=0.101 Sum_probs=65.1
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeec-CC-CCCCCCeEEEEEEecCCCCcceEEEEEE--E
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRS-HP-QGRLPNSYNITWMVSSYTPLEEFKIKYR--K 92 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~-~~-~~~~~~~~~L~W~~~~~~pi~~y~~~~r--~ 92 (152)
.++|.|.+++.+|+|.|+|+|.|. ......+.|..+|....... .. ....+..+.|.|.+.++++. .+.|... .
T Consensus 289 ~~~L~I~~v~~~D~G~Y~C~A~N~-~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p-~i~W~k~g~~ 366 (423)
T 3qs7_E 289 ILFAFVSSVARNDTGYYTCSSSKH-PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI-RCTWTFSRKS 366 (423)
T ss_dssp EEEEEESSCCTTTCEEEEEEETTE-EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCC-EEEEEETTEE
T ss_pred EEEEEEeecCHHHCEEEEEEEecC-CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCC-eEEEEECCEE
Confidence 357999999999999999999999 44444555555442211110 00 11235788999998876543 4444321 1
Q ss_pred CCCCC---CCcce---E--EecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 93 IPGNE---PSPMS---N--QLTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 93 ~~~~~---~~~~~---~--~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
..... ..... . .-.+.+.|.| .|.|..|....+....+
T Consensus 367 l~~~~~~~~~~~~~~~~~~~~~D~G~YtC--~A~N~~G~~~~s~~L~v 412 (423)
T 3qs7_E 367 FPCEQKGLDNGYSISKFCNHKHQPGEYIF--HAENDDAQFTKMFTLNI 412 (423)
T ss_dssp EECBCCBCSSSSEEEEECCCTTCCSCEEE--EEEETTEEEEEEEEEC-
T ss_pred CCCccccccCCcEEEEEecccccCEEEEE--EEEcCCceEEEEEEEEE
Confidence 10100 01111 1 1245899999 78999997754443333
No 180
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.72 E-value=1.9e-07 Score=71.19 Aligned_cols=84 Identities=15% Similarity=0.251 Sum_probs=53.0
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCC---ceE----EEEEEecCCC------------CceeecCCC
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMG---KHR----AYLELSGKPN------------PAIFRSHPQ 64 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G---~~~----~~~~v~~~P~------------p~~~~~~~~ 64 (152)
.+|+.+.. .+...+|.|.+++.+|+|.|.|.|.|..| ... ..+.|...|. ++.+...+.
T Consensus 91 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~ 170 (282)
T 1qok_A 91 QGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPA 170 (282)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECS
T ss_pred cCcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCC
Confidence 36888765 34568899999999999999999999987 211 2455555431 222221111
Q ss_pred ---CCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 65 ---GRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 65 ---~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
......+.|.|.+.+.. . ...||+.
T Consensus 171 ~~~v~~G~~v~L~C~~~~~~--~-~v~W~k~ 198 (282)
T 1qok_A 171 IMSASPGEKVTITCSASSSV--S-YMHWFQQ 198 (282)
T ss_dssp EEEECTTCCEEEEEEESSCC--S-CCEEEEE
T ss_pred EEEEcCCCcEEEEEEecCCC--c-eEEEEEE
Confidence 12468899999987654 2 2344554
No 181
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.72 E-value=1.1e-07 Score=72.60 Aligned_cols=105 Identities=15% Similarity=0.232 Sum_probs=64.8
Q ss_pred eEEEEceeCCCCCEEEEEEEE-cCCCceE---EEEEEecC----CCCceeecCCC----CCCCCeEEEEEEecCCCCcce
Q psy15979 18 HTLMIRKVVASDFGNYSCEAT-NPMGKHR---AYLELSGK----PNPAIFRSHPQ----GRLPNSYNITWMVSSYTPLEE 85 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~-N~~G~~~---~~~~v~~~----P~p~~~~~~~~----~~~~~~~~L~W~~~~~~pi~~ 85 (152)
..|.|.+++.+|+|.|+|.|. |..|... ..+.+... +.+|.+...+. ......+.|.|.+.+.++ ..
T Consensus 162 ~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~-p~ 240 (315)
T 1itb_B 162 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLS-DI 240 (315)
T ss_dssp TEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTT-SE
T ss_pred ceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCC-Ce
Confidence 489999999999999999999 8999873 34433211 34455443221 124678999999877543 33
Q ss_pred EEEEEEE---CCCCCC-------------------CcceEEe-----cC-CCeEEEEEEEEcCCCCCCC
Q psy15979 86 FKIKYRK---IPGNEP-------------------SPMSNQL-----TG-TNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 86 y~~~~r~---~~~~~~-------------------~~~~~~L-----~~-~~~Y~~rV~A~N~~G~g~~ 126 (152)
+.| ++. ...... ....+.| .+ .+.|.| .|.|.+|....
T Consensus 241 i~W-~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C--~a~N~~G~~~~ 306 (315)
T 1itb_B 241 AYW-KWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTC--FAKNTHGIDAA 306 (315)
T ss_dssp EEE-EETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEE--EEECTTCCEEE
T ss_pred eEE-EECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEE--EEecCCCceeE
Confidence 443 331 111110 0013333 33 788998 77999997743
No 182
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.72 E-value=3.1e-08 Score=71.21 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=30.2
Q ss_pred CEeEEEEce-eCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 16 SRHTLMIRK-VVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 16 ~~~~L~I~~-v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.+.+|.|.+ ++.+|+|.|+|+|.|..|.....+.+.
T Consensus 42 ~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 42 HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 345899999 999999999999999999866655443
No 183
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.71 E-value=4.1e-09 Score=68.57 Aligned_cols=51 Identities=29% Similarity=0.451 Sum_probs=39.3
Q ss_pred cccCCC----cEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCC
Q psy15979 2 RLETTE----RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (152)
Q Consensus 2 ~l~~~~----r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P 54 (152)
+|..+. ||.+...+....|.|.+++.+|+|.|+|.|.| +...+.+.|.++|
T Consensus 47 ~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--~~~~~~l~V~~~P 101 (101)
T 2edk_A 47 ELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG--GQCEAELIVEEKQ 101 (101)
T ss_dssp BCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS--CEECCBEEEECCC
T ss_pred ECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC--CcEEEEEEEeCCC
Confidence 344444 78888888888999999999999999999999 4444455555554
No 184
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.71 E-value=4e-08 Score=65.38 Aligned_cols=68 Identities=12% Similarity=0.228 Sum_probs=51.9
Q ss_pred CCCeEEEEEEec--CCCCcceEEEEEEECCCCCC--------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCcccc
Q psy15979 67 LPNSYNITWMVS--SYTPLEEFKIKYRKIPGNEP--------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIV 133 (152)
Q Consensus 67 ~~~~~~L~W~~~--~~~pi~~y~~~~r~~~~~~~--------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~ 133 (152)
..+++.|+|..+ ...+|..|.|+|+....... ....+. |.+++.|.|||.|.|..|.|.++....+.
T Consensus 30 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 109 (119)
T 2ed7_A 30 SSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVA 109 (119)
T ss_dssp CSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEECCCTTCCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEE
T ss_pred CCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeEeecCCceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEE
Confidence 468999999975 34578999999998754321 123443 66699999999999999999998876554
Q ss_pred c
Q psy15979 134 P 134 (152)
Q Consensus 134 ~ 134 (152)
+
T Consensus 110 T 110 (119)
T 2ed7_A 110 T 110 (119)
T ss_dssp C
T ss_pred e
Confidence 4
No 185
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.71 E-value=1.5e-08 Score=66.43 Aligned_cols=50 Identities=22% Similarity=0.270 Sum_probs=41.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..++|+.+..++....|.|.+++.+|+|.|+|.|.|..+...+.+.|.
T Consensus 47 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~l~V~ 96 (106)
T 2dlt_A 47 EVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSLSAKLNFL 96 (106)
T ss_dssp BCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETSCCCCCBCEEEE
T ss_pred ECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccCCceEEEEEEEE
Confidence 46677899998878888999999999999999999999965555555554
No 186
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.71 E-value=5.4e-09 Score=76.87 Aligned_cols=49 Identities=22% Similarity=0.357 Sum_probs=39.8
Q ss_pred ccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 3 l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
|..+.|+.+ .....+|.|.+++.+|+|.|+|+|.|.+|.+.+++.|++.
T Consensus 158 l~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 158 ISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp ECCCCCCCC--SSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCCCceEc--CCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 444455433 2345679999999999999999999999999999999875
No 187
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.71 E-value=5.6e-08 Score=66.97 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=40.1
Q ss_pred CCcEEEEEcC------CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEE--Eec-CCCCcee
Q psy15979 6 TERRIMETRG------SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLE--LSG-KPNPAIF 59 (152)
Q Consensus 6 ~~r~~i~~~~------~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~--v~~-~P~p~~~ 59 (152)
+.++++.... ....|.|.+++.+|+|.|+|.|.|..|.+++.+. |.. +|..|..
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p~~ 119 (126)
T 2dav_A 57 GKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNI 119 (126)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEEECCCCSCCCC
T ss_pred CceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCCcEEEEEEEEEEecCCCCCeE
Confidence 4677774211 2578999999999999999999999999988544 445 4444443
No 188
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.71 E-value=8.5e-08 Score=76.46 Aligned_cols=83 Identities=18% Similarity=0.265 Sum_probs=55.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce---EEEEEEecCCCCceeec-CCC--CCCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~~~v~~~P~p~~~~~-~~~--~~~~~~~~L~W~~~~ 79 (152)
.+|+.+...+....|.|.+++.+|+|.|+|.|.|..|.. ...+.|...+.+|.+.. .+. ......+.|.|.+.+
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g 142 (438)
T 1qgc_4 63 PDRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNN 142 (438)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred cCcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEcc
Confidence 468888766778899999999999999999999998742 34556654443444332 111 112458999999865
Q ss_pred CCCcc-eEEE
Q psy15979 80 YTPLE-EFKI 88 (152)
Q Consensus 80 ~~pi~-~y~~ 88 (152)
..|.. .+.|
T Consensus 143 ~~p~~~~v~W 152 (438)
T 1qgc_4 143 FYPKDINVKW 152 (438)
T ss_dssp EBSSCEEEEE
T ss_pred ccCCCcEEEE
Confidence 33322 4444
No 189
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.71 E-value=1.7e-08 Score=64.75 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=39.6
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P 54 (152)
+|..+.|+.+. .+.|.|.+++.+|+|.|+|.|.|..|.....+.|....
T Consensus 39 ~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 87 (95)
T 4hwu_A 39 HLGPNNRTVLI----GEYLQIKGATPRDSGLYACTAARTVDSETWIFMVNVTD 87 (95)
T ss_dssp EECCCSSEEEE----TTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred ECCCCceEEEe----CCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEeC
Confidence 34556777774 24799999999999999999999999988877776543
No 190
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.70 E-value=6.7e-07 Score=68.02 Aligned_cols=115 Identities=15% Similarity=0.172 Sum_probs=71.3
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCC-------ceEEEEEEecCCCCceeecCCC--CCCCCeEEEEEEecCCCCcceE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMG-------KHRAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEF 86 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G-------~~~~~~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~pi~~y 86 (152)
....|.|.+++.+|+|.|+|.|.|..+ ++...+.|.+.+.+|.+...+. ....+.++|.|...+.. ..|
T Consensus 60 ~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~--~~~ 137 (257)
T 1b6u_A 60 SKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSY--DMY 137 (257)
T ss_dssp EEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCC--SEE
T ss_pred ceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCC--cEE
Confidence 457899999999999999999997532 2334567776555555543322 23468999999987643 345
Q ss_pred EEEEEECCCCC--------C---CcceE---EecCCCeEEEEEEEEcC---CCCCCCCCCcccccc
Q psy15979 87 KIKYRKIPGNE--------P---SPMSN---QLTGTNQYQNRRLVRKR---FDRGNSTNGGLIVPK 135 (152)
Q Consensus 87 ~~~~r~~~~~~--------~---~~~~~---~L~~~~~Y~~rV~A~N~---~G~g~~s~~~~~~~~ 135 (152)
.| ++.-..-. . ....+ .+++.+.|.| .|.|. +.++.+++...+.+.
T Consensus 138 ~w-~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~D~G~Y~C--~a~~~~~p~~~s~~S~pl~L~V~ 200 (257)
T 1b6u_A 138 HL-SREGEAHERRFSAGPKVNGTFQADFPLGPATHGGTYRC--FGSFRDSPYEWSNSSDPLLVSVT 200 (257)
T ss_dssp EE-EETTSSCEECCBCBCCSSSCCBEEEEEEECCSCEEEEE--EEECSSCTTBBCCCCCCEEECCB
T ss_pred EE-EECCcccCcccccccccCCceeEEEEecccccCEEEEE--EEEcCCCCcccccCCCCEEEEEe
Confidence 54 44321100 0 01122 3446899999 55654 467778776645443
No 191
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.70 E-value=9.1e-08 Score=74.10 Aligned_cols=71 Identities=18% Similarity=0.210 Sum_probs=46.9
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcC--CCceEEE------EEEecCCCC--ceeecCC--CCCCCCeEEE
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP--MGKHRAY------LELSGKPNP--AIFRSHP--QGRLPNSYNI 73 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~--~G~~~~~------~~v~~~P~p--~~~~~~~--~~~~~~~~~L 73 (152)
+.++... ++.|.|.+++.+|+|.|+|.|.|. .|..... +.|...|.+ +.+ ... .......+.|
T Consensus 174 ~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l 248 (329)
T 3oq3_B 174 GTKYSQS----GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANI 248 (329)
T ss_dssp SSSEEEE----TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEE
T ss_pred CceEecC----CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEE
Confidence 4556554 368999999999999999999998 7655443 334444422 222 111 1123678999
Q ss_pred EEEecCCC
Q psy15979 74 TWMVSSYT 81 (152)
Q Consensus 74 ~W~~~~~~ 81 (152)
.|.+.+.+
T Consensus 249 ~C~~~g~p 256 (329)
T 3oq3_B 249 TCTAVSTS 256 (329)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 99987764
No 192
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.70 E-value=3.1e-08 Score=63.77 Aligned_cols=40 Identities=33% Similarity=0.483 Sum_probs=34.3
Q ss_pred EcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 13 TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 13 ~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
.......|.|.+++.+|+|.|+|.|.|..|.+...+.|..
T Consensus 57 ~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (100)
T 2kdg_A 57 SEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96 (100)
T ss_dssp ETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEE
Confidence 3445578999999999999999999999999888766654
No 193
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.70 E-value=3e-07 Score=66.41 Aligned_cols=114 Identities=12% Similarity=0.160 Sum_probs=68.0
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCC-------ceEEEEEEecCCCCceeecCCC--CCCCCeEEEEEEecCCCCcceE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMG-------KHRAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEF 86 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G-------~~~~~~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~pi~~y 86 (152)
....|.|.+++.+|+|.|+|.|.|..+ ++...+.|.+.+.+|.+...+. ...++.++|.|.+.+.. ..|
T Consensus 61 ~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~--~~~ 138 (201)
T 1nkr_A 61 SKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSY--DMY 138 (201)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSCC--SEE
T ss_pred ceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCCC--ceE
Confidence 457899999999999999999998531 2334566666554444433221 23468999999987532 345
Q ss_pred EEEEEECCCCCC---------C--cceE---EecCCCeEEEEEEEE-cCCCCCCCCCCccc
Q psy15979 87 KIKYRKIPGNEP---------S--PMSN---QLTGTNQYQNRRLVR-KRFDRGNSTNGGLI 132 (152)
Q Consensus 87 ~~~~r~~~~~~~---------~--~~~~---~L~~~~~Y~~rV~A~-N~~G~g~~s~~~~~ 132 (152)
.| ++....-.. . ...+ .+++.+.|.|..... |.+.++.+|+...+
T Consensus 139 ~w-~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~d~G~Y~C~a~~~~~~~~~s~~S~~~~l 198 (201)
T 1nkr_A 139 HL-SREGEAHERRLPAGPKVNGTFQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLV 198 (201)
T ss_dssp EE-EETTCSSCEEEECEEEETTEEEEEEEEEECCSCEEEEEEEEETTEEEEECCCCCCEEE
T ss_pred EE-EECCcccCcccccccccCCceEEEEEeCCcCCCeeEEEEEEcCCCCCcCCCCCCCEEE
Confidence 43 443211110 0 1122 234789999954322 33567877776543
No 194
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=98.70 E-value=8.2e-08 Score=69.52 Aligned_cols=81 Identities=11% Similarity=0.195 Sum_probs=58.0
Q ss_pred EecCCCCceeecCCCCCCCCeEEEEEEec--CCCCcceEEEEEEECCCC-CC--------C-c--ceEEecCCCeEEEEE
Q psy15979 50 LSGKPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKYRKIPGN-EP--------S-P--MSNQLTGTNQYQNRR 115 (152)
Q Consensus 50 v~~~P~p~~~~~~~~~~~~~~~~L~W~~~--~~~pi~~y~~~~r~~~~~-~~--------~-~--~~~~L~~~~~Y~~rV 115 (152)
|.++|.||...... . ..+++.|+|..+ ++.++..|.++|+..... .+ . . ....|.+++.|+|||
T Consensus 2 v~~~P~~P~~~~~~-~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~L~p~t~Y~~~V 79 (205)
T 1cfb_A 2 VQDVPNAPKLTGIT-C-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRV 79 (205)
T ss_dssp CCCCCCCCEEEEEE-E-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEEECCSSEEEEEEE
T ss_pred cccCCCCCCCcEEE-e-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEEeCCCCCEEEEEE
Confidence 45677776543221 2 678999999986 457899999999876432 11 1 1 123788899999999
Q ss_pred EEEcCCCCCCCC-CCccc
Q psy15979 116 LVRKRFDRGNST-NGGLI 132 (152)
Q Consensus 116 ~A~N~~G~g~~s-~~~~~ 132 (152)
.|.|..|.|.++ ....+
T Consensus 80 ~A~n~~G~~~~s~~~~~~ 97 (205)
T 1cfb_A 80 IAFNKIGASPPSAHSDSC 97 (205)
T ss_dssp EEEETTEECCCCCCCCCE
T ss_pred EEEECCccCCCCCCceeE
Confidence 999999999998 44444
No 195
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.70 E-value=1.5e-07 Score=71.44 Aligned_cols=123 Identities=9% Similarity=0.096 Sum_probs=75.0
Q ss_pred cccCCCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC------------------CCCceeec
Q psy15979 2 RLETTERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK------------------PNPAIFRS 61 (152)
Q Consensus 2 ~l~~~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~------------------P~p~~~~~ 61 (152)
+|..++++.+... +....|.|.+++.+|+|.|+|.|.|..+.....+.+.+. ..+|.+..
T Consensus 148 ~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 227 (312)
T 2y23_A 148 EIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE 227 (312)
T ss_dssp EECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEE
T ss_pred ECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceee
Confidence 4556677777653 456779999999999999999999987777766665311 11122111
Q ss_pred C-C-CCCCCCeEEEEEEecCCCCcceEEEEEEEC---C-CCC----CCcceEEe-----cCCCeEEEEEEEEcCCCCCCC
Q psy15979 62 H-P-QGRLPNSYNITWMVSSYTPLEEFKIKYRKI---P-GNE----PSPMSNQL-----TGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 62 ~-~-~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~---~-~~~----~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
. . .......+.|.|.+.+.++...+.|. +.. . ... .....+.| .+.+.|.| .|.|.+|....
T Consensus 228 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~-~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C--~a~N~~G~~~~ 304 (312)
T 2y23_A 228 YLSWEVTGECNVLLKCKVANIKKETHIVWY-KDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEV--ILKDDRGKDKS 304 (312)
T ss_dssp EEEEEEETTTEEEEEEEEESCCSSCEEEEE-ETTEEEEEECCC----CEEEEEECSCSGGGCEEEEE--EEESTTCCEEE
T ss_pred cceEEEeCCCEEEEEEEEcCCCCCCEEEEe-eCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEE--EEEcCCCceee
Confidence 0 0 11246889999999876544345543 211 0 000 11123333 33788988 77999997644
Q ss_pred C
Q psy15979 127 T 127 (152)
Q Consensus 127 s 127 (152)
+
T Consensus 305 ~ 305 (312)
T 2y23_A 305 R 305 (312)
T ss_dssp E
T ss_pred e
Confidence 3
No 196
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.70 E-value=4.8e-07 Score=68.41 Aligned_cols=87 Identities=21% Similarity=0.187 Sum_probs=54.9
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce---EEEEEEecCCC----------------Cc-eeecCC--
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSGKPN----------------PA-IFRSHP-- 63 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~~~v~~~P~----------------p~-~~~~~~-- 63 (152)
++|+.+...+...+|.|.+++.+|+|.|.|.|.|..+.. ...+.|...|. |. .+...+
T Consensus 69 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
T 2gjj_A 69 PDRFTGSGSGTDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPE 148 (264)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCE
T ss_pred CccEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCE
Confidence 478888766677899999999999999999999986532 12455554431 11 111111
Q ss_pred CCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 64 QGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 64 ~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
......++.|.|.+.+..+......||+.
T Consensus 149 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 149 VVKTGASVKISCKASGYSFTGYFINWVKK 177 (264)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EEcCCCcEEEEEEEeCCccCCeEEEEEEE
Confidence 11246789999998755331224445665
No 197
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=98.70 E-value=3.4e-07 Score=66.69 Aligned_cols=115 Identities=13% Similarity=0.063 Sum_probs=74.2
Q ss_pred EEEEceeCCCCCEEEEEEEEcCCCceEEE-EEEe----cCCCCceeecCC-CC--CCCCeEEEEEEecCCC------Ccc
Q psy15979 19 TLMIRKVVASDFGNYSCEATNPMGKHRAY-LELS----GKPNPAIFRSHP-QG--RLPNSYNITWMVSSYT------PLE 84 (152)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v~----~~P~p~~~~~~~-~~--~~~~~~~L~W~~~~~~------pi~ 84 (152)
.+.+.++..-..-.....|.|.+|..... +.+. .+|.||...... .. ....++.|+|..+... .+.
T Consensus 63 ~~~~~~l~~~~~Y~~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~ 142 (210)
T 3n06_B 63 HFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTL 142 (210)
T ss_dssp EECGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCE
T ss_pred EeCCCCcccceeEEEEEEEEcCCCCeeCCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEE
Confidence 33334455444455567899999987542 2232 357777543211 11 1357899999975422 357
Q ss_pred eEEEEEEECCCCCCC------cceEE---ecCCCeEEEEEEEEcCCCC-CCCCCCcccc
Q psy15979 85 EFKIKYRKIPGNEPS------PMSNQ---LTGTNQYQNRRLVRKRFDR-GNSTNGGLIV 133 (152)
Q Consensus 85 ~y~~~~r~~~~~~~~------~~~~~---L~~~~~Y~~rV~A~N~~G~-g~~s~~~~~~ 133 (152)
.|.|+|+......+. ...+. |.+++.|+|||+|+|..|. |+.|....+.
T Consensus 143 ~Y~v~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~ 201 (210)
T 3n06_B 143 LYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQ 201 (210)
T ss_dssp EEEEEEECTTCSSCEEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEE
T ss_pred EEEEEEecCCCCCCEEEeccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEE
Confidence 999999987543321 12344 5669999999999999994 9999877553
No 198
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=98.70 E-value=1.1e-07 Score=62.43 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=51.0
Q ss_pred CCCeEEEEEEecC----CCCcceEEEEEEECCCC---CC-------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 67 LPNSYNITWMVSS----YTPLEEFKIKYRKIPGN---EP-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 67 ~~~~~~L~W~~~~----~~pi~~y~~~~r~~~~~---~~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
..+++.|+|..+. +..|.+|.|.|+..... .+ ....+. |.+++.|+|+|.|.|..|.|.+|..
T Consensus 17 s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~ 96 (102)
T 3n1f_C 17 SDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNV 96 (102)
T ss_dssp SSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTEECCCCCC
T ss_pred CCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEEEEECCCcCCCCCCC
Confidence 4689999999753 45899999999987543 11 112343 5669999999999999999999987
Q ss_pred ccccc
Q psy15979 130 GLIVP 134 (152)
Q Consensus 130 ~~~~~ 134 (152)
..+.+
T Consensus 97 ~~~~T 101 (102)
T 3n1f_C 97 MICET 101 (102)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 65543
No 199
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.70 E-value=6.8e-08 Score=63.83 Aligned_cols=48 Identities=35% Similarity=0.574 Sum_probs=39.5
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
+|..++|+.+..++....|.|.+++.+|+|.|+|.| |.....+.|...
T Consensus 57 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V~ 104 (113)
T 2edh_A 57 TLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVR 104 (113)
T ss_dssp BCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEEC
T ss_pred ECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEEe
Confidence 566788999988888889999999999999999999 666665555543
No 200
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.69 E-value=4.3e-08 Score=75.50 Aligned_cols=110 Identities=20% Similarity=0.311 Sum_probs=67.4
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cC-CCCceeecC-CC---CCCCCeEEEEEEecCCCCcceEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GK-PNPAIFRSH-PQ---GRLPNSYNITWMVSSYTPLEEFK 87 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~-P~p~~~~~~-~~---~~~~~~~~L~W~~~~~~pi~~y~ 87 (152)
.....|.|.+++.+|+|.|+|.|.|..|.....+.|. .. |.+|.+... +. ......+.|.|.+.+.++ ..+.
T Consensus 177 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~-p~v~ 255 (334)
T 1ry7_B 177 HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQ-PHIQ 255 (334)
T ss_dssp TTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSC-EEEE
T ss_pred cceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCC-CeEE
Confidence 3456899999999999999999999999988765554 32 223333211 11 123577889998876543 3444
Q ss_pred EEEEE---CC-----CCC-------CC--------cceEEe-----cCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 88 IKYRK---IP-----GNE-------PS--------PMSNQL-----TGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 88 ~~~r~---~~-----~~~-------~~--------~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
| ++. .+ ... .. ...+.| .+.+.|.| .|.|.+|....+.
T Consensus 256 W-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~~~ 321 (334)
T 1ry7_B 256 W-LKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTC--LAGNSIGFSHHSA 321 (334)
T ss_dssp E-EECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEE--EEEESSCCEEEEE
T ss_pred E-EECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEE--EEeCCCCeEEEEE
Confidence 4 331 00 000 00 013333 33788988 7799999765543
No 201
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.69 E-value=3.7e-09 Score=76.69 Aligned_cols=110 Identities=11% Similarity=0.083 Sum_probs=61.8
Q ss_pred EEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeecCC-CCCCCCeEEEEEEe-cCCCCcceEEEEEE--E
Q psy15979 20 LMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHP-QGRLPNSYNITWMV-SSYTPLEEFKIKYR--K 92 (152)
Q Consensus 20 L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~~~-~~~~~~~~~L~W~~-~~~~pi~~y~~~~r--~ 92 (152)
|.|.+++.+|+|.|+|.|.|..|.... .+.|...|.+....... .......+.|.|.+ .+.++ ..+.|... .
T Consensus 71 l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~-~~v~W~~~g~~ 149 (217)
T 2vr9_A 71 RTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPE-PTLIWIKDGVP 149 (217)
T ss_dssp SCCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESC-CEEEEEETTEE
T ss_pred EEeccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCC-CeEEEEECCcC
Confidence 368999999999999999999997643 45554322211111000 01235778888887 44433 33444321 1
Q ss_pred CCCC-------CC-----CcceEEec-----CCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 93 IPGN-------EP-----SPMSNQLT-----GTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 93 ~~~~-------~~-----~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
.... .. ....+.|. +.+.|.| .|.|.+|....+...++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~G~~~~~~~~lv 204 (217)
T 2vr9_A 150 LDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKC--IAQNLVGTRESSYAKLI 204 (217)
T ss_dssp ECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEE--EEEETTEEEECCCEEEE
T ss_pred CCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEE--EEEcccceeccccEEEE
Confidence 1100 00 01123333 3678888 77999998866644433
No 202
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=2.3e-08 Score=65.96 Aligned_cols=51 Identities=16% Similarity=0.335 Sum_probs=40.5
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P 54 (152)
+|..++++.+...+....|.|.+++.+|+|.|+|.|.| ......+.|..+|
T Consensus 52 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n--~~~~~~l~V~~~p 102 (113)
T 2cpc_A 52 EVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD--ESASFTVTVTEPP 102 (113)
T ss_dssp ECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS--CEEEEEEEEECCC
T ss_pred ECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec--CcEEEEEEEecCC
Confidence 35566788888777778999999999999999999999 4444456666555
No 203
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=98.69 E-value=4.5e-07 Score=65.43 Aligned_cols=113 Identities=11% Similarity=0.167 Sum_probs=74.7
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE-EEEe--------------cCCC-Ccee---ecCCCCCCCCeEEEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LELS--------------GKPN-PAIF---RSHPQGRLPNSYNITW 75 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v~--------------~~P~-p~~~---~~~~~~~~~~~~~L~W 75 (152)
+......|.++.+.-.-.++..|.|..|..... +.+. ..|. |+.. .........+++.|+|
T Consensus 53 ~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W 132 (201)
T 2ha1_A 53 GHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSW 132 (201)
T ss_dssp TTCCEEEECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEEC
T ss_pred CCccEEEecCCCCCCEEEEEEEEEecccccCceeEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEE
Confidence 335578888988777777788999999987652 1111 1121 1111 0011223468999999
Q ss_pred EecCCCCcceEEEEEEECCCCCC--------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 76 MVSSYTPLEEFKIKYRKIPGNEP--------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 76 ~~~~~~pi~~y~~~~r~~~~~~~--------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
..+. .++..|.+.|+....... ...++. |.+++.|.|+|.|.|..|.|.+..
T Consensus 133 ~~p~-~~i~~Y~v~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s 195 (201)
T 2ha1_A 133 VSAS-DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLIL 195 (201)
T ss_dssp CCSC-TTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEE
T ss_pred eCCC-CCccEEEEEEEECCCCCceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEe
Confidence 9774 478999999997533221 113444 556999999999999999998753
No 204
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.68 E-value=9.6e-08 Score=73.19 Aligned_cols=105 Identities=10% Similarity=-0.004 Sum_probs=63.6
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEecCCCCceeecCCC----CCCCCeEEEEEEecCCCCcceEEEEEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSGKPNPAIFRSHPQ----GRLPNSYNITWMVSSYTPLEEFKIKYR 91 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~~~P~p~~~~~~~~----~~~~~~~~L~W~~~~~~pi~~y~~~~r 91 (152)
+.|.|.++..+|.|.|+|+|.|..|..... +.|... .||.+...+. ......+.|.|.+.++++...+.|. +
T Consensus 177 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~-~ 254 (313)
T 4fqp_A 177 SLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY-YPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWS-T 254 (313)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC-EEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEE-E
T ss_pred eeeeecccccccCeeEEEEEEccCcCccceeeeecccc-cCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEE-E
Confidence 469999999999999999999998766543 333322 2222221111 1235779999999876544445553 3
Q ss_pred ECCCCCC----CcceEEe-----cCCCeEEEEEEEEcCCCCCCC
Q psy15979 92 KIPGNEP----SPMSNQL-----TGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 92 ~~~~~~~----~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
....-.. ....+.| .+.+.|.| .|.|.+|....
T Consensus 255 ~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~ 296 (313)
T 4fqp_A 255 TMGPLPPFAVAQGAQLLIRPVDKPINTTLIC--NVTNALGARQA 296 (313)
T ss_dssp TTBSCCTTEEEETTEEEECCCSSCCEEEEEE--EEECSSCEEEE
T ss_pred CCEECCCceEEeCCEEEECcCChhhCEEEEE--EEEeCCCcEEE
Confidence 2211100 1123333 33788988 78999997643
No 205
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=98.68 E-value=5.9e-07 Score=68.21 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=78.9
Q ss_pred cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
......+.|.++.+.-.-.+...|.|..|.... .+.....|.+|..... .....+++.|+|..+. .++..|.++|+.
T Consensus 161 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~~l~~-~~~~~~sv~l~W~~p~-~~~~~Y~v~~~~ 238 (290)
T 3r8q_A 161 KPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRF-LATTPNSLLVSWQPPR-ARITGYIIKYEK 238 (290)
T ss_dssp CTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE-EEEETTEEEEEEECCS-SCCCEEEEEEEC
T ss_pred CCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCCccEE-EeeCCCEEEEEEeCCC-CcccEEEEEEEe
Confidence 344567889999888777888899999886543 3444445555433221 1234689999999865 378899999997
Q ss_pred CCCCC--------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 93 IPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 93 ~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
..... .....+. |.+++.|.|+|.|.|..|.|+|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 284 (290)
T 3r8q_A 239 PGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPL 284 (290)
T ss_dssp TTSCCEECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred CCCCcceeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCcc
Confidence 65432 1123444 55699999999999999999875
No 206
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.67 E-value=6.3e-09 Score=70.61 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=64.1
Q ss_pred EEEEcCCCceEEE---EEEe---cCCCCceeecCCCCCCCCeEEEEEEecC--CCCcceEEEEEEECCCCC--C------
Q psy15979 35 CEATNPMGKHRAY---LELS---GKPNPAIFRSHPQGRLPNSYNITWMVSS--YTPLEEFKIKYRKIPGNE--P------ 98 (152)
Q Consensus 35 C~A~N~~G~~~~~---~~v~---~~P~p~~~~~~~~~~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~--~------ 98 (152)
+.|.|..|....+ +.+. ..|.+|..... .....+++.|+|..+. +.+|..|.++|+...... .
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~ 81 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILF-PEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLA 81 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCCEE-EEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEEC
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCCCCCCceEE-EecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEEEEeC
Confidence 3466887765432 2222 34554432210 1234689999999753 347889999999875432 1
Q ss_pred -CcceE---EecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 99 -SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 99 -~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
....+ .|.+++.|+|+|.|.|..|.|.++....+.+
T Consensus 82 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 121 (130)
T 1wfo_A 82 PSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 121 (130)
T ss_dssp TTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred CCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEec
Confidence 11233 3666999999999999999999887655544
No 207
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=98.67 E-value=1.3e-07 Score=68.45 Aligned_cols=112 Identities=12% Similarity=0.080 Sum_probs=71.6
Q ss_pred EEEEceeCCCCCEEEEEEEEcCCCceEEE---EEEe---cCC-CCceeecCCCCCCCCeEEEEEEecC----CCCcceEE
Q psy15979 19 TLMIRKVVASDFGNYSCEATNPMGKHRAY---LELS---GKP-NPAIFRSHPQGRLPNSYNITWMVSS----YTPLEEFK 87 (152)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~G~~~~~---~~v~---~~P-~p~~~~~~~~~~~~~~~~L~W~~~~----~~pi~~y~ 87 (152)
.+.+ ++.+.-.-.+...|.|..|....+ +.+. ..| .+|.... ......+++.|+|..+. +.++..|.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~-~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~ 141 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV-GQGTEPNNLVISWTPMPEIEHNAPNFHYY 141 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCE-EECSSTTCEEEECCCCCGGGTCSSSCEEE
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeE-eecCCCCeEEEEEECCCccccCCCceEEE
Confidence 4455 776655556677899999865432 2222 233 2332111 01234679999999743 45789999
Q ss_pred EEEEECCCCC-C--------CcceEE---ecCCCeEEEEEEEEcCCCCCCC-CCCccc
Q psy15979 88 IKYRKIPGNE-P--------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNS-TNGGLI 132 (152)
Q Consensus 88 ~~~r~~~~~~-~--------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~-s~~~~~ 132 (152)
++|+...... + ....+. |.+++.|+|+|.|.|..|.|.+ +....+
T Consensus 142 v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~ 199 (205)
T 1cfb_A 142 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVG 199 (205)
T ss_dssp EEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEE
T ss_pred EEEEECCCCCCcEEEEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEE
Confidence 9999876542 1 123454 5559999999999999999995 555443
No 208
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.67 E-value=3.3e-07 Score=75.01 Aligned_cols=83 Identities=18% Similarity=0.259 Sum_probs=54.3
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce-----EEEEEEecCC-CCceeecCCC---CCCCCeEEEEEE
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSGKP-NPAIFRSHPQ---GRLPNSYNITWM 76 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~~~v~~~P-~p~~~~~~~~---~~~~~~~~L~W~ 76 (152)
++||.+...+....|.|.+++.+|+|.|+|+|.|..|.. ...+.|...+ .||.+...+. ......+.|.|.
T Consensus 58 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~ 137 (523)
T 2rcj_C 58 PTRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCL 137 (523)
T ss_pred CCcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEE
Confidence 367776656677899999999999999999999988742 2245554332 3343332221 123568899999
Q ss_pred ecCCCCc-ceEEE
Q psy15979 77 VSSYTPL-EEFKI 88 (152)
Q Consensus 77 ~~~~~pi-~~y~~ 88 (152)
+.+..|. ..+.|
T Consensus 138 ~~g~~p~~~~v~W 150 (523)
T 2rcj_C 138 ISDFYPGAVTVAW 150 (523)
T ss_pred eccccCCceEEEE
Confidence 8776543 24444
No 209
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.67 E-value=1.3e-07 Score=68.77 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=52.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc----eEEEEEEecCCCCceeec-CCC--CCCCCeEEEEEEec
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK----HRAYLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVS 78 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~----~~~~~~v~~~P~p~~~~~-~~~--~~~~~~~~L~W~~~ 78 (152)
.+|+.+...+...+|.|.+++.+|+|.|+|.|.|..|. ....+.|...+.||.+.. .+. ......+.|.|.+.
T Consensus 60 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 139 (216)
T 2xzc_L 60 PDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLN 139 (216)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred CCceEEeccCCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEE
Confidence 46888876667889999999999999999999999871 122455555444554432 211 11246899999987
Q ss_pred CC
Q psy15979 79 SY 80 (152)
Q Consensus 79 ~~ 80 (152)
+.
T Consensus 140 g~ 141 (216)
T 2xzc_L 140 NF 141 (216)
T ss_dssp EE
T ss_pred eE
Confidence 64
No 210
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.67 E-value=1.1e-07 Score=70.96 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=43.9
Q ss_pred CcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCceE--EEEEEecCCCCceeecCCCCCCCCeEEEEEEe
Q psy15979 7 ERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHR--AYLELSGKPNPAIFRSHPQGRLPNSYNITWMV 77 (152)
Q Consensus 7 ~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~--~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~ 77 (152)
+|+.+.. ...+.+|.|.+++.+|+|.|+|.|.|..+... ..+.|...|.+|.... ......+.|.|.+
T Consensus 71 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~---v~~G~~v~L~C~~ 142 (268)
T 3mj6_A 71 NRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLR---VRVGDTTQMRCSI 142 (268)
T ss_dssp TTEEECSCTTTTBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEE---EETTCCEEECCBC
T ss_pred CceEEeecCCCCEEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccc---cccCCcEEEEEEe
Confidence 4555521 22347899999999999999999999876553 3455555444332211 1235677888877
No 211
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.67 E-value=1.1e-07 Score=68.66 Aligned_cols=77 Identities=17% Similarity=0.234 Sum_probs=53.2
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceE---EEEEEecCCCCceeecCCCC---CCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRSHPQG---RLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~~~v~~~P~p~~~~~~~~~---~~~~~~~L~W~~~~ 79 (152)
++||.+...+...+|.|.+++.+|+|.|+|.|.|..|... ..+.|...+.+|.+...+.. .....+.|.|.+.+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g 138 (213)
T 3r06_A 59 PSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNN 138 (213)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred CCcEEEeccCCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEee
Confidence 5788887777788999999999999999999999875332 23555444455544332211 13457999999876
Q ss_pred CCC
Q psy15979 80 YTP 82 (152)
Q Consensus 80 ~~p 82 (152)
..|
T Consensus 139 ~~p 141 (213)
T 3r06_A 139 FYP 141 (213)
T ss_dssp EBS
T ss_pred ecC
Confidence 433
No 212
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=98.67 E-value=1.3e-07 Score=62.20 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=52.6
Q ss_pred CCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCC-CCC-------CcceEE---ecCCCeEEEEEEEEcCC
Q psy15979 53 KPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG-NEP-------SPMSNQ---LTGTNQYQNRRLVRKRF 121 (152)
Q Consensus 53 ~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~-~~~-------~~~~~~---L~~~~~Y~~rV~A~N~~ 121 (152)
+|.||..... .....+++.|+|..+. .++..|.|.|+.... ... ...++. |.+++.|+|+|.|.|..
T Consensus 2 ~p~~P~~l~v-~~~t~~sv~lsW~~p~-~~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~ 79 (104)
T 2rb8_A 2 RLDAPSQIEV-KDVTDTTALITWMPPS-QPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGD 79 (104)
T ss_dssp CCCCCEEEEE-ESCCSSCEEEEEECCS-SCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCCCCCccEE-EEecCCeEEEEEcCCC-CccceEEEEEEECcCCCceEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeCC
Confidence 3555543321 1245689999999765 678999999987642 211 123444 55599999999999999
Q ss_pred CCCCCCCCc
Q psy15979 122 DRGNSTNGG 130 (152)
Q Consensus 122 G~g~~s~~~ 130 (152)
|.|.++...
T Consensus 80 g~s~p~~~~ 88 (104)
T 2rb8_A 80 MSSNPAKET 88 (104)
T ss_dssp EECCCEEEE
T ss_pred ccCCCEEEE
Confidence 999876544
No 213
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.67 E-value=8.8e-08 Score=69.38 Aligned_cols=74 Identities=16% Similarity=0.311 Sum_probs=51.4
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc-------eEEEEEEecCC-CCceeec-CCC--CCCCCeEEEEE
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK-------HRAYLELSGKP-NPAIFRS-HPQ--GRLPNSYNITW 75 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~-------~~~~~~v~~~P-~p~~~~~-~~~--~~~~~~~~L~W 75 (152)
+|+.+...+...+|.|.+++.+|+|.|+|.|.|..|. ....+.|...| .+|.+.. .+. ......+.|.|
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C 143 (218)
T 3s96_B 64 DRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVC 143 (218)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEE
T ss_pred cceEEecCCceEEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEE
Confidence 5888876677889999999999999999999999872 12245555544 3444332 111 11247899999
Q ss_pred EecCC
Q psy15979 76 MVSSY 80 (152)
Q Consensus 76 ~~~~~ 80 (152)
.+.+.
T Consensus 144 ~~~g~ 148 (218)
T 3s96_B 144 LISNF 148 (218)
T ss_dssp EEEEE
T ss_pred EECcc
Confidence 98763
No 214
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.67 E-value=2.6e-08 Score=66.45 Aligned_cols=68 Identities=16% Similarity=0.241 Sum_probs=51.3
Q ss_pred CCCeEEEEEEec--CCCCcceEEEEEEECCCC-CCC------cceE---EecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 67 LPNSYNITWMVS--SYTPLEEFKIKYRKIPGN-EPS------PMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 67 ~~~~~~L~W~~~--~~~pi~~y~~~~r~~~~~-~~~------~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
..+++.|.|..+ ++.+|..|.|+|+..... .+. ...+ .|.+++.|+|||.|.|..|.|.++....+..
T Consensus 30 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T 109 (118)
T 1x3d_A 30 TKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 109 (118)
T ss_dssp ETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEEC
T ss_pred CCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEeeccCCcEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEc
Confidence 468999999985 456889999999876542 221 1233 4666999999999999999999998665443
No 215
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=1.4e-07 Score=62.22 Aligned_cols=69 Identities=16% Similarity=0.231 Sum_probs=52.0
Q ss_pred CCCeEEEEEEecC--CCCcceEEEEEEECCC-CCC-------CcceE---EecCCCeEEEEEEEEcCCCCCCCCCCcccc
Q psy15979 67 LPNSYNITWMVSS--YTPLEEFKIKYRKIPG-NEP-------SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIV 133 (152)
Q Consensus 67 ~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~-~~~-------~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~ 133 (152)
..+++.|+|..+. +.+|..|.|+|+.... ... ....+ .|.+++.|.|||+|.|..|.|.++....+.
T Consensus 20 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 99 (109)
T 2e7h_A 20 SPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQ 99 (109)
T ss_dssp ETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEESSSEEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECC
T ss_pred CCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEccCCCEEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEE
Confidence 4689999999753 3578999999998762 211 11233 466699999999999999999999877665
Q ss_pred cc
Q psy15979 134 PK 135 (152)
Q Consensus 134 ~~ 135 (152)
+.
T Consensus 100 T~ 101 (109)
T 2e7h_A 100 TQ 101 (109)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 216
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.66 E-value=1e-07 Score=61.62 Aligned_cols=47 Identities=23% Similarity=0.388 Sum_probs=38.8
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..+.|+.+...+....|.|.+++.+|+|.|+|.| |.....+.|..
T Consensus 47 ~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V 93 (100)
T 2yuv_A 47 EIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFV 93 (100)
T ss_dssp BCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEE
T ss_pred ECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEE
Confidence 466678999988888889999999999999999999 66666655543
No 217
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.66 E-value=6.8e-08 Score=75.99 Aligned_cols=106 Identities=18% Similarity=0.192 Sum_probs=66.0
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC---CCCCCeEEEEEEecCCCCcceEEEEEE--E
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKIKYR--K 92 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~pi~~y~~~~r--~ 92 (152)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|..... |.+...+. ......+.|.|.+.+.++. .+.|... .
T Consensus 275 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-~v~W~~~g~~ 352 (403)
T 3laf_A 275 SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP-PWFLNHPSNLYAYESMDIEFECAVSGKPVP-TVNWMKNGDV 352 (403)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE-EEEEECCCCEECCTTCCEEECCEEEEESCC-EEEEEETTEE
T ss_pred cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECC-CcEeecCcceEEecCCeEEEEEEEeeccCC-EEEEEECCEE
Confidence 57999999999999999999999999888766654321 22221111 1235788999998765443 3444321 1
Q ss_pred CCCCC----CCcceEEe-----cCCCeEEEEEEEEcCCCCCCCC
Q psy15979 93 IPGNE----PSPMSNQL-----TGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 93 ~~~~~----~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
..... .....+.| .+.+.|.| .|.|.+|....+
T Consensus 353 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~~ 394 (403)
T 3laf_A 353 VIPSDYFQIVGGSNLRILGVVKSDEGFYQC--VAENEAGNAQSS 394 (403)
T ss_dssp CCCSSSEEEETTTEEEESSCCGGGCEEEEE--EEEETTEEEEEE
T ss_pred CCCCCcEEEecCccEEEeccccccCEEEEE--EEEcCCceEEEE
Confidence 11110 01122333 33788988 779999986544
No 218
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.66 E-value=3e-08 Score=76.96 Aligned_cols=62 Identities=26% Similarity=0.396 Sum_probs=37.0
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCC-Cce---EEEEEEe--cCCC---CceeecCC-----CCCCCCeEEEEEEecC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPM-GKH---RAYLELS--GKPN---PAIFRSHP-----QGRLPNSYNITWMVSS 79 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~-G~~---~~~~~v~--~~P~---p~~~~~~~-----~~~~~~~~~L~W~~~~ 79 (152)
..|.|.+++.+|+|.|+|+|.|.. |.. ...+.|. ..+. ||.+.... .......+.|.|.+.+
T Consensus 177 ~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~ 252 (349)
T 4dep_C 177 MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYF 252 (349)
T ss_dssp TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEE
T ss_pred CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEE
Confidence 579999999999999999999998 654 4445444 3321 44443222 1123567788888763
No 219
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.65 E-value=2e-07 Score=61.68 Aligned_cols=68 Identities=19% Similarity=0.306 Sum_probs=52.2
Q ss_pred CCCeEEEEEEec--CCCCcceEEEEEEECCCCCCC-----cceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 67 LPNSYNITWMVS--SYTPLEEFKIKYRKIPGNEPS-----PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 67 ~~~~~~L~W~~~--~~~pi~~y~~~~r~~~~~~~~-----~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
..+++.|+|..+ ...++..|.|+|+........ ...+. |.+++.|.|+|.|.|..|.|.++....+..
T Consensus 30 ~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 107 (116)
T 1x5g_A 30 SPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRT 107 (116)
T ss_dssp ETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEECSSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEEC
T ss_pred CCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEecCCceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEEC
Confidence 468999999986 345789999999987654321 13344 556999999999999999999887765544
No 220
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.65 E-value=4.5e-08 Score=68.51 Aligned_cols=51 Identities=22% Similarity=0.358 Sum_probs=41.5
Q ss_pred cccCCCcEEEEEc-CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..+.|+.+... ...+.|.|.+++.+|+|.|+|.|.|.+|.....+.|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 132 (154)
T 1fhg_A 81 PVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLV 132 (154)
T ss_dssp ECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEE
Confidence 3556678887643 34679999999999999999999999999888766654
No 221
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.65 E-value=5.7e-08 Score=68.92 Aligned_cols=51 Identities=25% Similarity=0.374 Sum_probs=44.2
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..+.++.+..++....|.|.+++.+|+|.|+|.|.|.+|.....+.|..
T Consensus 143 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 143 EIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp ECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 456678888887777889999999999999999999999999988777653
No 222
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.65 E-value=5.2e-08 Score=64.89 Aligned_cols=77 Identities=21% Similarity=0.365 Sum_probs=53.6
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecCC-CCcceEEEEEEECCCCCC--------CcceE---EecCCCeEEEEEEEEc
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSSY-TPLEEFKIKYRKIPGNEP--------SPMSN---QLTGTNQYQNRRLVRK 119 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~~-~pi~~y~~~~r~~~~~~~--------~~~~~---~L~~~~~Y~~rV~A~N 119 (152)
+.|.+|.... ......+++.|+|..+.. .+|..|.|+|+......+ ....+ .|.+++.|.|||.|.|
T Consensus 16 ~~P~~P~~l~-~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 16 GVPDTPTRLV-FSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp SCCCCCCCCE-ECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEESCCTTCEEEEEEEEEE
T ss_pred CCCCCCCceE-EEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEEcCCCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence 4555543221 123456899999997543 378999999998654321 12333 4666999999999999
Q ss_pred CCCCCCCCCC
Q psy15979 120 RFDRGNSTNG 129 (152)
Q Consensus 120 ~~G~g~~s~~ 129 (152)
..|.|.++..
T Consensus 95 ~~G~g~~S~~ 104 (118)
T 2yrz_A 95 QEGWGREREG 104 (118)
T ss_dssp SSCEEEEEEE
T ss_pred CCcCCCCcCC
Confidence 9999998863
No 223
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.65 E-value=2.9e-07 Score=68.82 Aligned_cols=35 Identities=14% Similarity=0.317 Sum_probs=29.9
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
.+|+.+.. .+...+|.|.+++.+|+|.|.|.|.|.
T Consensus 71 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 71 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCC
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEec
Confidence 36888873 355778999999999999999999997
No 224
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.65 E-value=2.6e-07 Score=67.23 Aligned_cols=69 Identities=13% Similarity=0.137 Sum_probs=47.0
Q ss_pred EEEEceeCCCCCEEEEEEEEcCC-CceEEEEE--EecCCCCceeecCCCC---CCCCeE-EEEEEe-cCCCCcceEEE
Q psy15979 19 TLMIRKVVASDFGNYSCEATNPM-GKHRAYLE--LSGKPNPAIFRSHPQG---RLPNSY-NITWMV-SSYTPLEEFKI 88 (152)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~~~--v~~~P~p~~~~~~~~~---~~~~~~-~L~W~~-~~~~pi~~y~~ 88 (152)
.|.|.+++.+|+|.|+|.|.|.. |.....+. |...|.++.+...+.. .....+ .|.|.+ .+.++ ..+.|
T Consensus 78 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~-p~i~W 154 (231)
T 2pet_A 78 RLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPA-PKITW 154 (231)
T ss_dssp CEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSC-CEEEE
T ss_pred eEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccC-CEEEE
Confidence 49999999999999999999997 77766544 4456665555433321 134555 999998 55443 33444
No 225
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.64 E-value=1.2e-07 Score=72.25 Aligned_cols=117 Identities=15% Similarity=0.139 Sum_probs=70.0
Q ss_pred CcEEEEE--cCCEeEEEEceeCC-CCCEEEEEEEEcCCCceEEEEEEe--cCC----CCceeecCCCC---CCCCeEEEE
Q psy15979 7 ERRIMET--RGSRHTLMIRKVVA-SDFGNYSCEATNPMGKHRAYLELS--GKP----NPAIFRSHPQG---RLPNSYNIT 74 (152)
Q Consensus 7 ~r~~i~~--~~~~~~L~I~~v~~-~D~G~YtC~A~N~~G~~~~~~~v~--~~P----~p~~~~~~~~~---~~~~~~~L~ 74 (152)
.|+.+.. ++....|.|.+++. +|+|.|+|+|.|..|.....+.|. ..+ .+|.+...+.. .....+.|.
T Consensus 50 ~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~ 129 (304)
T 2yd9_A 50 QRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATML 129 (304)
T ss_dssp TTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEC
T ss_pred CceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEE
Confidence 4555542 44458899999998 999999999999999866554443 332 12333332211 235788999
Q ss_pred EEecCCCCcceEEEEEEECC---CCC-------CCcceEEec-----CCCeEEEEEEEEcCCCCCCCC
Q psy15979 75 WMVSSYTPLEEFKIKYRKIP---GNE-------PSPMSNQLT-----GTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 75 W~~~~~~pi~~y~~~~r~~~---~~~-------~~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s 127 (152)
|.+.+.++. .+.| ++... ... .....+.|. +.+.|.| .|.|..|....+
T Consensus 130 C~~~g~p~~-~v~W-~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~~~ 193 (304)
T 2yd9_A 130 CAASGNPDP-EITW-FKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYEC--VATNSAGVRYSS 193 (304)
T ss_dssp CEEECSSCC-EEEE-EETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEE--EEEETTEEEECC
T ss_pred EECccCCCC-eEEE-EECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEE--EEEeCCCCEEec
Confidence 998765432 3444 33211 000 011133333 3778888 668999876544
No 226
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=1.4e-07 Score=63.75 Aligned_cols=70 Identities=14% Similarity=0.078 Sum_probs=50.7
Q ss_pred CCCCeEEEEEEec----CCCCcceEEEEEEECCCC---C------CCcceE---EecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 66 RLPNSYNITWMVS----SYTPLEEFKIKYRKIPGN---E------PSPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 66 ~~~~~~~L~W~~~----~~~pi~~y~~~~r~~~~~---~------~~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
...+++.|.|..+ .+.+|..|.|+|+..... . .....+ .|.+++.|.|||.|.|..|.|.++..
T Consensus 31 ~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~ 110 (124)
T 2dbj_A 31 ESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDP 110 (124)
T ss_dssp SSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTSCEEEECCCSSSEEEECEEEEESSCBCCCCCC
T ss_pred CCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcceEEecCCCCCCEEEEEEEEECCCccCCCCCC
Confidence 3468999999976 235799999999743221 1 111233 46669999999999999999999987
Q ss_pred cccccc
Q psy15979 130 GLIVPK 135 (152)
Q Consensus 130 ~~~~~~ 135 (152)
..+...
T Consensus 111 ~~~~T~ 116 (124)
T 2dbj_A 111 VKIFIP 116 (124)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 766443
No 227
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=98.64 E-value=1.4e-07 Score=78.44 Aligned_cols=110 Identities=8% Similarity=-0.033 Sum_probs=74.2
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCC-----CCcceEEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY-----TPLEEFKIK 89 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~-----~pi~~y~~~ 89 (152)
+..+.|+|.+++.+|+|.|+|++.+.-....+.+.+..+|.+|....-. .....++.++|..+.. .++..|.++
T Consensus 248 ~~~~~L~I~nl~~sd~g~y~~~C~~~~~i~~~~l~v~~pP~~P~nl~C~-~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~ 326 (488)
T 2q7n_A 248 GQTVAIHILNIPVSENSGTNIIFITDDDVYGTVVFAGYPPDVPQKLSCE-THDLKEIICSWNPGRITGLVGPRNTEYTLF 326 (488)
T ss_dssp SSCEEEECCSCCCCCSSCEEEEEEESSCEEEEEEEEECCCCCCCSCEEE-BSSSSEEEEEECCCSCCCCCTTSSCEEEEE
T ss_pred ceEEEEEEeCCCcccCCcEEEEEEcCCeEEEEEEEeeCCCCCCcccEEE-EcCCCEEEEEEeCCCcCCCCCCCceeEEEE
Confidence 4567899999999999999998885333333456666777766532111 1245799999998532 357899999
Q ss_pred EEECCCCC---------CCc--ceEEecC-CCeEEEEEEEEcCCCCCC
Q psy15979 90 YRKIPGNE---------PSP--MSNQLTG-TNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 90 ~r~~~~~~---------~~~--~~~~L~~-~~~Y~~rV~A~N~~G~g~ 125 (152)
|+..+... ... ..+.+.+ .+.|.|+|.|.|..|.+.
T Consensus 327 y~~~g~~~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~ 374 (488)
T 2q7n_A 327 ESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ 374 (488)
T ss_dssp ETTTCCEEEEECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE
T ss_pred EEECCCCCCCccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc
Confidence 86542210 111 2334555 599999999999999954
No 228
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.64 E-value=1.7e-08 Score=73.82 Aligned_cols=100 Identities=12% Similarity=0.083 Sum_probs=63.1
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC-CCCCCeEEEEEEecCCCCcceEEEEEEECCCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPLEEFKIKYRKIPGN 96 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~-~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~ 96 (152)
..|.|.+++.+|+|.|+|.|.|...+....+.|...| ........ ......+.|.|.+.+..|...+.| ++....-
T Consensus 54 ~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~l~V~~~p--~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W-~k~g~~~ 130 (204)
T 3sgj_C 54 SSYFIDAATVDDSGEYRCQTQLSTLSDPVQLEVHIGW--LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTY-LQNGKGR 130 (204)
T ss_dssp SEEEESSCCGGGCEEEEEEETTSBCCCCEEEEEECSS--EEEECSCSEEETTCCEEEEEEEGGGCCCEEEEE-EETTEEE
T ss_pred cEEEEecccccCCEEEEEEeCCCcccccEEEEEecCc--eEecCCceeEeCCCcEEEEEEecCCCCCceEEE-EECCcEe
Confidence 6899999999999999999999877777777776543 22211111 124678999999976656555555 3321100
Q ss_pred C--CCcceE-----EecCCCeEEEEEEEEcCCC
Q psy15979 97 E--PSPMSN-----QLTGTNQYQNRRLVRKRFD 122 (152)
Q Consensus 97 ~--~~~~~~-----~L~~~~~Y~~rV~A~N~~G 122 (152)
. .....+ ..++.+.|.| .|.|..|
T Consensus 131 ~~~~~~~~L~i~~v~~~D~G~Y~C--~a~n~~~ 161 (204)
T 3sgj_C 131 KYFHHNSDFYIPKATLKDSGSYFC--RGLVGSK 161 (204)
T ss_dssp EEEEECCCEEESSCCGGGCEEEEE--EEEETTE
T ss_pred ecccCCceEEECcCCcccCEEEEE--EEEeCCC
Confidence 0 011222 3444899999 6688544
No 229
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.64 E-value=6.6e-08 Score=68.36 Aligned_cols=47 Identities=26% Similarity=0.446 Sum_probs=41.8
Q ss_pred CCcEEEEEcCCEeEEEEceeC-CCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 6 TERRIMETRGSRHTLMIRKVV-ASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~-~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
++|+.+...+..+.|.|.+++ .+|+|.|+|.|.|.+|.....+.|.+
T Consensus 134 ~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 181 (184)
T 3b5h_A 134 ESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181 (184)
T ss_dssp GGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEE
Confidence 478999888888999999999 99999999999999999998766653
No 230
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.64 E-value=4.3e-08 Score=69.16 Aligned_cols=115 Identities=15% Similarity=0.142 Sum_probs=65.7
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE--E--EEEecCCCCceeec--CCCCCCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--Y--LELSGKPNPAIFRS--HPQGRLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~--~~v~~~P~p~~~~~--~~~~~~~~~~~L~W~~~~ 79 (152)
+.|+.+.. .+.|.|.+++.+|+|.|+|.|.|..+.... . +.+..+|....... .........+.|.|.+.+
T Consensus 48 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g 124 (189)
T 2v5t_A 48 DNRFAMLA---NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASG 124 (189)
T ss_dssp CTTEEECT---TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEE
T ss_pred CCeEEEec---CCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEcc
Confidence 45666643 346999999999999999999999865433 2 33333332110000 001123578899999876
Q ss_pred CCCcceEEEEEEEC---CCCC-----CCcceEEec-----CCCeEEEEEEEEcCCCCCCCC
Q psy15979 80 YTPLEEFKIKYRKI---PGNE-----PSPMSNQLT-----GTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 80 ~~pi~~y~~~~r~~---~~~~-----~~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s 127 (152)
.++ ..+.| ++.. .... .....+.|. +.+.|.| .|.|.+|....+
T Consensus 125 ~p~-~~v~W-~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~~~~~ 181 (189)
T 2v5t_A 125 SPE-PAISW-FRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVC--RATNKAGEDEKQ 181 (189)
T ss_dssp ESC-CEEEE-EETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEE--EEEETTEEEEEE
T ss_pred CCC-CeEEE-EECCEECcCCCcEEEecCCCEEEEcCCChhhCeeEEE--EEEeCCCceeEE
Confidence 533 34444 3321 1110 011223333 3788988 679999976543
No 231
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.64 E-value=1.9e-08 Score=71.37 Aligned_cols=99 Identities=11% Similarity=0.080 Sum_probs=59.4
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGN 96 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~ 96 (152)
..+|.|.+++.+|+|.|+|.|.|..|..... |...+.++... ......+.|.|.+.+. |...+.|. +.....
T Consensus 67 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~l~--V~~~~~~~~~~----v~~g~~~~l~C~~~~~-p~~~v~W~-~~~~~~ 138 (184)
T 2ny1_B 67 NFPLIIKNLKIEDSDTYICEVEDQKEEVQLL--VFGLTANSDTH----LLQGQSLTLTLESPPG-SSPSVQCR-SPRGKN 138 (184)
T ss_dssp BCCEEECSCCGGGCEEEEEEETTEEEEEEEE--EEEEEESSCSE----EETTCCEEEEEECCTT-CCCEEEEE-CTTSCE
T ss_pred eEEEEEecCCHHHCEEEEEEEEcCCCcEEEE--EEEecCCCCce----eecCCCEEEEEEcCCC-CCCEEEEE-eCCCcc
Confidence 5569999999999999999999998754433 33222221111 1235789999998775 44445553 221100
Q ss_pred CCCcceEE-----ecCCCeEEEEEEEEcCCCCCC
Q psy15979 97 EPSPMSNQ-----LTGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 97 ~~~~~~~~-----L~~~~~Y~~rV~A~N~~G~g~ 125 (152)
......+. .++.+.|.|.+ .|..|.-.
T Consensus 139 ~~~~~~L~i~~v~~~d~G~Y~C~a--~n~~~~~~ 170 (184)
T 2ny1_B 139 IQGGKTLSVSQLELQDSGTWTCTV--LQNQKKVE 170 (184)
T ss_dssp EEESSEEEESSCCGGGCEEEEEEE--EETTEEEE
T ss_pred ccCceEEEEecCCcCCCeEEEEEE--EECCceEE
Confidence 01112233 34488999954 68776543
No 232
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.63 E-value=3.2e-08 Score=75.52 Aligned_cols=106 Identities=8% Similarity=-0.071 Sum_probs=63.7
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEecCCCCceeecCCC----CCCCCeEEEEEEecCCCCcceEEEEEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSGKPNPAIFRSHPQ----GRLPNSYNITWMVSSYTPLEEFKIKYR 91 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~~~P~p~~~~~~~~----~~~~~~~~L~W~~~~~~pi~~y~~~~r 91 (152)
+.|.|.++..+|.|.|+|+|.|..|..... +.|... .||.+...+. ......+.|.|.+.+.++...+.| ++
T Consensus 172 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W-~k 249 (308)
T 4fom_A 172 SQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ-YAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVW-SR 249 (308)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC-EEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEEC-CB
T ss_pred ccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe-cCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEE-EE
Confidence 469999999999999999999998876553 333322 1222221111 123467899999887655444444 33
Q ss_pred ECCCCC----CCc-ce-----EEecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 92 KIPGNE----PSP-MS-----NQLTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 92 ~~~~~~----~~~-~~-----~~L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
....-. ... .. ...++.+.|.| .|.|.+|....+
T Consensus 250 ~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C--~A~N~~G~~~~~ 293 (308)
T 4fom_A 250 LDGQWPDGLLASDNTLHFVHPLTFNYSGVYIC--KVTNSLGQRSDQ 293 (308)
T ss_dssp SSSCCCSSCBCSTTEEECCSCCCSCCCSEEEE--EEEETTEEEEEE
T ss_pred CCeECCCcEEEcCCeEEEECCCChhhCEEEEE--EEEeCCCcEEEE
Confidence 221111 111 11 13344789988 789999976443
No 233
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.63 E-value=1.2e-07 Score=74.24 Aligned_cols=90 Identities=14% Similarity=0.018 Sum_probs=57.4
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcC--CCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCC-CcceEEEEEEEC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNP--MGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYT-PLEEFKIKYRKI 93 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~--~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~-pi~~y~~~~r~~ 93 (152)
...|.|.+++.+|+|.|+|.|.|. .|.....+.|.... .....+.|.|.+.+.+ |...+.| ++..
T Consensus 254 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~-----------v~g~~~~l~C~~~g~p~p~~~i~W-~~~~ 321 (363)
T 1wio_A 254 PLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR-----------ATQLQKNLTCEVWGPTSPKLMLSL-KLEN 321 (363)
T ss_dssp SCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE-----------ECCCSSSEEEEEESSCCTTCCEEE-ECSS
T ss_pred ceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE-----------ecCCCeeEEEEEccccCCCccEEE-EeCC
Confidence 458999999999999999999999 99888877665431 0135577888887653 3222443 2221
Q ss_pred CCCCCC-c---ceEEecCCCeEEEEEEEEcC
Q psy15979 94 PGNEPS-P---MSNQLTGTNQYQNRRLVRKR 120 (152)
Q Consensus 94 ~~~~~~-~---~~~~L~~~~~Y~~rV~A~N~ 120 (152)
..-... . .....++.+.|.| .|.|.
T Consensus 322 ~~~~~~~~l~i~~v~~~d~G~Y~C--~a~~~ 350 (363)
T 1wio_A 322 KEAKVSKREKAVWVLNPEAGMWQC--LLSDS 350 (363)
T ss_dssp SSCSEEESSSEEEESSCCSEEEEE--EECSS
T ss_pred CceeeeeeeeeeeeccccceeEEE--EEecC
Confidence 111011 1 2234555899999 44553
No 234
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=98.63 E-value=1.3e-07 Score=70.11 Aligned_cols=112 Identities=9% Similarity=0.097 Sum_probs=77.2
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEE--EEEEe---cCCCCce-eecCCCCCCCCeEEEEEEecC--CCCcceEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELS---GKPNPAI-FRSHPQGRLPNSYNITWMVSS--YTPLEEFK 87 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~~~v~---~~P~p~~-~~~~~~~~~~~~~~L~W~~~~--~~pi~~y~ 87 (152)
....+.|.++.+.-.-.+.+.|.|..|.... .+.+. ..|.+|. +.. .....+++.|+|..+. +.++..|.
T Consensus 56 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~--~~~~~~sv~l~W~~p~~~~g~i~~Y~ 133 (234)
T 3f7q_A 56 KVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAF--NVVSSTVTQLSWAEPAETNGEITAYE 133 (234)
T ss_dssp SSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEE--EECSSSCEEEECCCCSCCSSCCCEEE
T ss_pred CccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEE--EEecCCEEEEEEcCCCCCCCceeEEE
Confidence 3456889999988888888899999886533 23332 3344332 221 1234688999999753 35789999
Q ss_pred EEEEECCCCC-------------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 88 IKYRKIPGNE-------------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 88 ~~~r~~~~~~-------------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
++|+...... .....+. |.+++.|.|+|.|.|..|.|.++..
T Consensus 134 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 191 (234)
T 3f7q_A 134 VCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREA 191 (234)
T ss_dssp EEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred EEEEECCCCCCccCcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCc
Confidence 9999764332 1112344 5669999999999999999998763
No 235
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.63 E-value=6e-07 Score=66.93 Aligned_cols=76 Identities=12% Similarity=0.120 Sum_probs=48.8
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCceE---EEEEEecC------------CCCceeecCCC---C
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGK------------PNPAIFRSHPQ---G 65 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~~~v~~~------------P~p~~~~~~~~---~ 65 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.|.|..+... ..+.|... +.++.+...+. .
T Consensus 66 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v 145 (253)
T 3uzq_A 66 QGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAV 145 (253)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEE
T ss_pred CCcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEE
Confidence 367877643 3467799999999999999999999766542 23444431 11222222111 2
Q ss_pred CCCCeEEEEEEecCCC
Q psy15979 66 RLPNSYNITWMVSSYT 81 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~ 81 (152)
....++.|.|.+.+..
T Consensus 146 ~~G~~v~L~C~~~~~~ 161 (253)
T 3uzq_A 146 SLGQRATISCRASENV 161 (253)
T ss_dssp CTTSCEEEEEEESSCC
T ss_pred eCCCCEEEEEEecCcc
Confidence 2468899999987643
No 236
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.63 E-value=7.4e-08 Score=75.55 Aligned_cols=76 Identities=17% Similarity=0.190 Sum_probs=48.6
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYR 91 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r 91 (152)
..++|.|.+++.+|+|.|+|.|.|..|.... .+.+...+.|..............+.|.|.+....|...+.|...
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~ 138 (395)
T 1bih_A 60 DEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKR 138 (395)
T ss_dssp TSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEE
T ss_pred CCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEec
Confidence 4568999999999999999999999998763 344443333332211111234678899998633233345555443
No 237
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.63 E-value=2.2e-07 Score=61.99 Aligned_cols=69 Identities=16% Similarity=0.149 Sum_probs=52.0
Q ss_pred CCCeEEEEEEecCCCCcceEEEEEEECCCCCC---------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 67 LPNSYNITWMVSSYTPLEEFKIKYRKIPGNEP---------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 67 ~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~~---------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
..+++.|+|..+...+|..|.++|+....... ....+. |.+++.|.|+|.|.|..|.|.++....+..
T Consensus 31 ~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 110 (119)
T 2ee2_A 31 SSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFT 110 (119)
T ss_dssp ETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEC
T ss_pred cCCEEEEEecCCCCCccceEEEEEEECCCcccCcEEEEcCCCEeEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEEC
Confidence 46899999998644678999999988653220 112444 555999999999999999999998776554
Q ss_pred c
Q psy15979 135 K 135 (152)
Q Consensus 135 ~ 135 (152)
.
T Consensus 111 ~ 111 (119)
T 2ee2_A 111 K 111 (119)
T ss_dssp C
T ss_pred C
Confidence 3
No 238
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.63 E-value=1.8e-07 Score=67.68 Aligned_cols=75 Identities=19% Similarity=0.188 Sum_probs=52.7
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeec-CCC--CCCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~-~~~--~~~~~~~~L~W~~~~ 79 (152)
.+|+.+...+....|.|.+++.+|+|.|+|.|.|..|.... .+.|...+.||.+.. .+. ......+.|.|.+.+
T Consensus 58 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g 137 (210)
T 1lk3_L 58 PARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNN 137 (210)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred cccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEe
Confidence 36888876667789999999999999999999999875432 455555444444332 111 113568999999875
Q ss_pred C
Q psy15979 80 Y 80 (152)
Q Consensus 80 ~ 80 (152)
.
T Consensus 138 ~ 138 (210)
T 1lk3_L 138 F 138 (210)
T ss_dssp E
T ss_pred E
Confidence 3
No 239
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.62 E-value=1e-07 Score=79.43 Aligned_cols=102 Identities=8% Similarity=-0.032 Sum_probs=61.8
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCC-
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG- 95 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~- 95 (152)
...|.|.+++.+|+|.|+|+|.|..|.+...+.|.+.- ||.+...+ ....|.|.+.+.++. .+.|.......
T Consensus 377 ~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~-~P~i~~~~-----~~~~l~C~a~g~P~p-~i~W~~~~~~~~ 449 (527)
T 3qs9_E 377 GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRR-KPQVLAEA-----SASQASCFSDGYPLP-SWTWKKCSDKSP 449 (527)
T ss_dssp SSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--C-CCEEEECC-----CCE---EEEECSSCC-EEEEECCC----
T ss_pred CcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEec-CCeEEEeC-----CCCEEEEEEEEEcCC-eEEEEECCCCcC
Confidence 46899999999999999999999999999887777653 33443322 123578888776543 44443110000
Q ss_pred ---C-------------CCC---c--ceE---EecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 96 ---N-------------EPS---P--MSN---QLTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 96 ---~-------------~~~---~--~~~---~L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
. ... . ..+ .+++.+.|.| .|.|.+|....+
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C--~A~N~~G~~~~~ 503 (527)
T 3qs9_E 450 NCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKC--CAYNSLGTSCET 503 (527)
T ss_dssp -CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEE--EEECSSCEEEEE
T ss_pred CCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEE--EEEeCCCCceeE
Confidence 0 000 0 111 2345889988 889999987543
No 240
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.62 E-value=1e-07 Score=67.77 Aligned_cols=47 Identities=26% Similarity=0.400 Sum_probs=42.0
Q ss_pred CCCcEEEEEcCCEeEEEEceeC-CCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 5 TTERRIMETRGSRHTLMIRKVV-ASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~-~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.+.|+.+...+..+.|.|.+++ .+|+|.|+|.|+|.+|.....+.|.
T Consensus 140 ~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 187 (190)
T 2wv3_A 140 SSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLR 187 (190)
T ss_dssp TTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEE
T ss_pred CCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEE
Confidence 5688999888888899999999 7999999999999999998876664
No 241
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.62 E-value=4.3e-07 Score=67.83 Aligned_cols=85 Identities=15% Similarity=0.150 Sum_probs=51.9
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCC----CceE--EEEEEecCC-------------CCceeecCCC
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM----GKHR--AYLELSGKP-------------NPAIFRSHPQ 64 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~----G~~~--~~~~v~~~P-------------~p~~~~~~~~ 64 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.|.|.. +... ..+.|...+ .++.+...+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~ 146 (256)
T 3umt_A 67 KGKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPS 146 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECS
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCC
Confidence 467877643 456779999999999999999999982 2211 234444311 1222222121
Q ss_pred ---CCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 65 ---GRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 65 ---~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.....+++|.|.+.+..+. ...||+.
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~ 175 (256)
T 3umt_A 147 SLSASLGERVSITCRASQDIGS--NLNWLQQ 175 (256)
T ss_dssp EEEECTTCCEEEEEEESSCCTT--CEEEEEE
T ss_pred eEEEECCCCEEEEEEEecCCCc--EEEEEEE
Confidence 1246889999998764432 3445664
No 242
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.62 E-value=1.3e-07 Score=70.04 Aligned_cols=73 Identities=18% Similarity=0.186 Sum_probs=43.6
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecC-CCCCCCCeEEEEEEecCCCCcc-eEEEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSH-PQGRLPNSYNITWMVSSYTPLE-EFKIK 89 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~-~~~~~~~~~~L~W~~~~~~pi~-~y~~~ 89 (152)
..+|.|.+++.+|+|.|+|.+.|..|.....+.|.....|...... ........+.|.|.+.+..|.. .+.|.
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~ 155 (248)
T 3pv7_A 81 DASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWE 155 (248)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEE
T ss_pred cEEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEE
Confidence 4459999999999999999999999887776555433222221111 1112345677999987632322 44443
No 243
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=9.2e-08 Score=65.21 Aligned_cols=82 Identities=10% Similarity=0.164 Sum_probs=53.2
Q ss_pred ecCCCCce-eecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCC-----------CCC------CcceEE---ecCCC
Q psy15979 51 SGKPNPAI-FRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG-----------NEP------SPMSNQ---LTGTN 109 (152)
Q Consensus 51 ~~~P~p~~-~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~-----------~~~------~~~~~~---L~~~~ 109 (152)
...|.||. ... ......+++.|.|..+....+..|.++|+.... ..+ ....+. |.+++
T Consensus 13 ~~~P~~P~~~~~-~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~t 91 (127)
T 2dmk_A 13 LTAPNPPSIREE-LCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGT 91 (127)
T ss_dssp CSSCCCCEEEEE-EEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSSC
T ss_pred cCCCcCCCCCCE-EEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCCC
Confidence 45677776 221 123357899999998754447889999986210 011 112333 66699
Q ss_pred eEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 110 QYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 110 ~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
.|.|||.|.|.+|. .++....+.+
T Consensus 92 ~Y~frV~A~N~~G~-~~S~~v~~~T 115 (127)
T 2dmk_A 92 RYIFIVKAINQAGS-RNSEPTRLKT 115 (127)
T ss_dssp EEEEEEEEEESSCE-EECCCEEEEC
T ss_pred EEEEEEEEEeCCCC-CCCcCeEeEe
Confidence 99999999999999 4555444433
No 244
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.61 E-value=9.1e-08 Score=62.05 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=36.6
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
++|+.+.. .....+|.|.+++.+|+|.|+|.|.| .|.....+.|.
T Consensus 58 ~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~~~~L~ 103 (108)
T 3m45_A 58 DNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTSKAYLT 103 (108)
T ss_dssp CTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEEEEEEE
T ss_pred cCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEEEEEEE
Confidence 45887753 33578999999999999999999999 88888765554
No 245
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.61 E-value=6.6e-08 Score=62.22 Aligned_cols=37 Identities=24% Similarity=0.454 Sum_probs=32.3
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.....|.|.+++.+|+|.|+|.|.|.+|.+...+.|.
T Consensus 61 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 97 (99)
T 2yr3_A 61 AGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97 (99)
T ss_dssp TTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEE
T ss_pred CCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEE
Confidence 3567899999999999999999999999988765554
No 246
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.61 E-value=9.2e-08 Score=74.94 Aligned_cols=106 Identities=17% Similarity=0.177 Sum_probs=66.2
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC---CCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
....|.|.+++.+|+|.|+|.|.|..|.....+.|.....| .+...+. ......+.|.|.+.+.++. .+.| ++.
T Consensus 255 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p-~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~v~W-~~~ 331 (382)
T 1cs6_A 255 SEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQP-DWLDVITDTEADIGSDLRWSCVASGKPRP-AVRW-LRD 331 (382)
T ss_dssp SSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE-EEEECCCCEEEETTCCEEEECEEEEESCC-EEEE-EET
T ss_pred CCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCC-CcccCCCccEEcCCCeEEEEEEeeeecCC-EEEE-EEC
Confidence 45689999999999999999999999998886665533222 2221111 1235788999998765443 3444 332
Q ss_pred C---CCCC---CCcceEEec-----CCCeEEEEEEEEcCCCCCCC
Q psy15979 93 I---PGNE---PSPMSNQLT-----GTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 93 ~---~~~~---~~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~ 126 (152)
. .... .....+.|. +.+.|.| .|.|.+|....
T Consensus 332 g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~~~ 374 (382)
T 1cs6_A 332 GQPLASQNRIEVSGGELRFSKLVLEDSGMYQC--VAENKHGTVYA 374 (382)
T ss_dssp TEECCCCSSEEEETTEEEESSCCGGGCEEEEE--EEEETTEEEEE
T ss_pred CEECCCCceEEEECCEEEECcCCcccCEEEEE--EEEeCCCeEEE
Confidence 1 1110 001223333 3788888 77999997643
No 247
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.61 E-value=4e-07 Score=68.46 Aligned_cols=81 Identities=21% Similarity=0.203 Sum_probs=52.2
Q ss_pred CCcEEEE-EcCCEeEEEEceeCCCCCEEEEEEEEcCCCce-EEEEEEecCCCCceeecCCC---CCCCCeEEEEEEecCC
Q psy15979 6 TERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-RAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSY 80 (152)
Q Consensus 6 ~~r~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~~~~~v~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~ 80 (152)
+.|+.+. ..+..+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|...+.| .+...+. ......+.|.|.+.+.
T Consensus 49 ~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~-~~~~~~~~~~~~~g~~v~l~C~~~~~ 127 (291)
T 1qz1_A 49 QQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKL-MFKNAPTPQEFKEGEDAVIVCDVVSS 127 (291)
T ss_dssp CSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCS-EEEECCSSEEEETTSCEEECCEEECS
T ss_pred CceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccc-cccCCCCcccccCCCeEEEEEEeccC
Confidence 4566664 34567899999999999999999999999754 344555433222 2211111 1235788999998766
Q ss_pred CCcceEEE
Q psy15979 81 TPLEEFKI 88 (152)
Q Consensus 81 ~pi~~y~~ 88 (152)
++. .+.|
T Consensus 128 p~~-~v~W 134 (291)
T 1qz1_A 128 LPP-TIIW 134 (291)
T ss_dssp SCC-EEEE
T ss_pred CCC-EEEE
Confidence 433 3444
No 248
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.61 E-value=9.7e-08 Score=69.89 Aligned_cols=83 Identities=14% Similarity=0.247 Sum_probs=56.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce---EEEEEEecCCCCceeecCCCC---CCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSGKPNPAIFRSHPQG---RLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~~~v~~~P~p~~~~~~~~~---~~~~~~~L~W~~~~ 79 (152)
++||.+...+...+|.|.+++.+|+|.|+|.|.|..|.. ...+.|...+.+|.+...+.. .....+.|.|.+.+
T Consensus 82 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~ 161 (237)
T 3sob_L 82 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNN 161 (237)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEE
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcc
Confidence 578888777778899999999999999999999987632 224555555555554332111 12457999999876
Q ss_pred CCC-cceEEE
Q psy15979 80 YTP-LEEFKI 88 (152)
Q Consensus 80 ~~p-i~~y~~ 88 (152)
..| ...+.|
T Consensus 162 ~~p~~~~v~W 171 (237)
T 3sob_L 162 FYPREAKVQW 171 (237)
T ss_dssp EBSSCCEEEE
T ss_pred cCCCceEEEE
Confidence 444 334444
No 249
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.61 E-value=1.3e-07 Score=61.92 Aligned_cols=38 Identities=29% Similarity=0.510 Sum_probs=33.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEc
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATN 39 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N 39 (152)
+|..++|+.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 46 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 46 TLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp BCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT
T ss_pred ECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC
Confidence 46677899998888888999999999999999999966
No 250
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.61 E-value=3.3e-07 Score=66.24 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=52.3
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceE---EEEEEecCC-CCceeecCCC---CCCCCeEEEEEEec
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKP-NPAIFRSHPQ---GRLPNSYNITWMVS 78 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~~~v~~~P-~p~~~~~~~~---~~~~~~~~L~W~~~ 78 (152)
.+|+.+...+....|.|.+++.+|+|.|+|.|.|..|... ..+.|...+ .||.+...+. ......+.|.|.+.
T Consensus 61 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 140 (212)
T 1q0x_L 61 PARFSGSLIGDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTIT 140 (212)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred cccEEEEeeCCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEE
Confidence 4688877666778999999999999999999999887422 234554333 3444432111 11356899999987
Q ss_pred CCCC
Q psy15979 79 SYTP 82 (152)
Q Consensus 79 ~~~p 82 (152)
+..|
T Consensus 141 g~~p 144 (212)
T 1q0x_L 141 DFYP 144 (212)
T ss_dssp EEBS
T ss_pred EEeC
Confidence 6433
No 251
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=98.60 E-value=4.2e-07 Score=68.86 Aligned_cols=116 Identities=17% Similarity=0.151 Sum_probs=77.8
Q ss_pred cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEe---cCC-CCceeecCCCCCCCCeEEEEEEec----CCCCcc
Q psy15979 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS---GKP-NPAIFRSHPQGRLPNSYNITWMVS----SYTPLE 84 (152)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~---~~P-~p~~~~~~~~~~~~~~~~L~W~~~----~~~pi~ 84 (152)
......+.|.++.+.-.-.+...|.|..|.... .+.+. ..| .|+.+.. .....+++.|+|... ...+|.
T Consensus 153 ~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~~~P~~~p~~~~--~~~~~~sv~l~W~~~~~~~~~g~i~ 230 (290)
T 3l5i_A 153 GTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRT--KKVGKNEAVLEWDQLPVDVQNGFIR 230 (290)
T ss_dssp TTCSEEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSCCCCSSCCCEEE--EEECSSCEEEEECCCCHHHHSSCCC
T ss_pred CCCcceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccccCCCCCCeeeE--eeccCCEEEEEEcCCChhccCCEEE
Confidence 334556777888888888888999999886443 22222 233 3333332 123568999999832 346799
Q ss_pred eEEEEEEECCCCC------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 85 EFKIKYRKIPGNE------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 85 ~y~~~~r~~~~~~------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
.|.+.|+...... ....++. |.+++.|.|+|.|.|..| |.++....+
T Consensus 231 ~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~ 286 (290)
T 3l5i_A 231 NYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTF 286 (290)
T ss_dssp EEEEEEEETTSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEE
T ss_pred EEEEEEEeCCCCeEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEe
Confidence 9999999875432 1123454 555999999999999999 766665544
No 252
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.60 E-value=4.7e-08 Score=64.36 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=32.7
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
...|.|.+++.+|+|.|+|.|.|..|.+++.+.|.+
T Consensus 71 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V 106 (108)
T 3cx2_A 71 LFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTV 106 (108)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred eEEEEEecCCCccCEEEEEEEecCCCceEEEEEEEE
Confidence 578999999999999999999999999998877653
No 253
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.60 E-value=3.6e-07 Score=70.13 Aligned_cols=103 Identities=14% Similarity=0.234 Sum_probs=62.6
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCC-------ceEEEEEEecCCCCceeecCCC--CCCCCeEEEEEEecCCCCcceE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMG-------KHRAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEF 86 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G-------~~~~~~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~pi~~y 86 (152)
....|.|.+++.+|+|.|+|.|.|..+ +....+.|.+.+.+|.+...+. ......+.|.|.+.+.. ..|
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~--~~~ 149 (316)
T 3vh8_G 72 FQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMF--EHF 149 (316)
T ss_dssp BSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCC--SEE
T ss_pred ceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCC--cEE
Confidence 356799999999999999999997432 1233466666554444443221 12468899999985432 244
Q ss_pred EEEEEECCCCCC-----------CcceEEec-----CCCeEEEEEEEEcCCCC
Q psy15979 87 KIKYRKIPGNEP-----------SPMSNQLT-----GTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 87 ~~~~r~~~~~~~-----------~~~~~~L~-----~~~~Y~~rV~A~N~~G~ 123 (152)
.| |+....... ....+.|. +.+.|.| .|.|..|.
T Consensus 150 ~w-~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C--~a~n~~g~ 199 (316)
T 3vh8_G 150 FL-HKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRC--YGSVTHTP 199 (316)
T ss_dssp EE-EETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEE--EEECTTCT
T ss_pred EE-EECCCccccceeeeeecCCCceEEEEECCCChhhCceEEE--EEecCCCC
Confidence 44 333221111 01223333 3889998 77999885
No 254
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.60 E-value=2.7e-07 Score=69.38 Aligned_cols=116 Identities=15% Similarity=0.102 Sum_probs=67.7
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE--E--EEEecCCCCceeec--CCCCCCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--Y--LELSGKPNPAIFRS--HPQGRLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~--~~v~~~P~p~~~~~--~~~~~~~~~~~L~W~~~~ 79 (152)
+.|+.+.. .+.|.|.+++.+|+|.|+|.|.|..+.... . +.+..+|....... .........+.|.|.+.+
T Consensus 144 ~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 220 (291)
T 2wim_A 144 DNRFAMLA---NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASG 220 (291)
T ss_dssp CSSEEECT---TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCC
T ss_pred CceEEEcc---CCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeec
Confidence 45666643 346999999999999999999999865432 2 33334442211000 001224678999999877
Q ss_pred CCCcceEEEEEEEC---CCCC-----CCcceEE-----ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 80 YTPLEEFKIKYRKI---PGNE-----PSPMSNQ-----LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 80 ~~pi~~y~~~~r~~---~~~~-----~~~~~~~-----L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
.++. .+.|. +.. .... .....+. ..+.+.|.| .|.|.+|..+.+.
T Consensus 221 ~p~p-~v~W~-~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~G~~~~~~ 278 (291)
T 2wim_A 221 SPEP-AISWF-RNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVC--RATNKAGEDEKQA 278 (291)
T ss_dssp BSCC-EEEEE-ETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEE--EEEETTEEEEEEE
T ss_pred CCCC-eEEEE-ECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEE--EEEECCCceeeeE
Confidence 6433 35543 321 1111 0112233 334788988 7799999875443
No 255
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.60 E-value=3.2e-07 Score=61.04 Aligned_cols=68 Identities=18% Similarity=0.191 Sum_probs=51.6
Q ss_pred CCCeEEEEEEecC----CCCcceEEEEEEECCCCCC-----------C-cceE---EecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 67 LPNSYNITWMVSS----YTPLEEFKIKYRKIPGNEP-----------S-PMSN---QLTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 67 ~~~~~~L~W~~~~----~~pi~~y~~~~r~~~~~~~-----------~-~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
..+++.|+|..+. +.+|..|.|+|+....... . ...+ .|.+++.|.|+|.|.|..|.|.++
T Consensus 28 ~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 107 (122)
T 1va9_A 28 TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS 107 (122)
T ss_dssp SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEEEEETTEECCCC
T ss_pred cCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCc
Confidence 4689999999863 4579999999998764311 0 1233 366699999999999999999998
Q ss_pred CCccccc
Q psy15979 128 NGGLIVP 134 (152)
Q Consensus 128 ~~~~~~~ 134 (152)
....+..
T Consensus 108 ~~~~~~T 114 (122)
T 1va9_A 108 SEINATT 114 (122)
T ss_dssp CCEECCC
T ss_pred cCEEEEe
Confidence 7765544
No 256
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.59 E-value=1.6e-07 Score=67.91 Aligned_cols=83 Identities=19% Similarity=0.222 Sum_probs=52.8
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce-----EEEEEEecCC-CCceeecCCC---CCCCCeEEEEEE
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSGKP-NPAIFRSHPQ---GRLPNSYNITWM 76 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~~~v~~~P-~p~~~~~~~~---~~~~~~~~L~W~ 76 (152)
.+|+.+...+....|.|.+++.+|+|.|+|.|.|..+.. ...+.|...+ .||.+...+. ......+.|.|.
T Consensus 57 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~ 136 (212)
T 1nfd_E 57 PERFSGSTSGTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCL 136 (212)
T ss_dssp CTTEEEEEETTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEE
T ss_pred cccEEEEeeCCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEE
Confidence 478888776678899999999999999999999832211 1234554333 3444432211 112468899998
Q ss_pred ecCCCCc-ceEEE
Q psy15979 77 VSSYTPL-EEFKI 88 (152)
Q Consensus 77 ~~~~~pi-~~y~~ 88 (152)
+.+..|. ..+.|
T Consensus 137 ~~g~~p~~~~v~W 149 (212)
T 1nfd_E 137 VNDFYPGSATVTW 149 (212)
T ss_dssp EEEEBSSCCEEEE
T ss_pred EEeeECCccEEEE
Confidence 8765332 34444
No 257
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.59 E-value=5.2e-08 Score=69.39 Aligned_cols=50 Identities=22% Similarity=0.245 Sum_probs=43.8
Q ss_pred cccCCCcEEEEEcCCEeEEEEce-eCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRK-VVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~-v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..+.++.+...+..+.|.|.+ ++.+|+|.|+|+|.|.+|..+..+.|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 194 (197)
T 2j8h_A 144 LIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELD 194 (197)
T ss_dssp EECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEE
Confidence 45667888888777889999999 999999999999999999998877665
No 258
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.59 E-value=1.6e-08 Score=67.94 Aligned_cols=48 Identities=29% Similarity=0.491 Sum_probs=39.5
Q ss_pred CCcEEEE--EcCC--EeEEEEceeCCCCC-EEEEEEEEcCCCceEEEEEEecC
Q psy15979 6 TERRIME--TRGS--RHTLMIRKVVASDF-GNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 6 ~~r~~i~--~~~~--~~~L~I~~v~~~D~-G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
+.||.+. ..+. .+.|.|.+++.+|+ |.|+|.|.|.+|.+...+.|...
T Consensus 60 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~ 112 (122)
T 2cry_A 60 SGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQ 112 (122)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEEECCCCS
T ss_pred CCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEEEEEEEEC
Confidence 4677773 2223 66899999999999 99999999999999998887754
No 259
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.59 E-value=1.5e-07 Score=78.44 Aligned_cols=107 Identities=11% Similarity=0.076 Sum_probs=60.4
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC-CCCCCeEEEEEEecCCCCcceEEEEEEECCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~-~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~ 95 (152)
..+|.|.+|+.+|+|.|+|.|.|..|.....+.|...|.+......+. ........|.|.+.+.++ ..+.|.......
T Consensus 102 ~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~-P~i~W~~~~~~~ 180 (527)
T 3qs9_E 102 VVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPE-PIVEWVLCDSQG 180 (527)
T ss_dssp EEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSC-CEEEEEEC----
T ss_pred EEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEECCceeeccCCCcEEecCCceEEEEEEceecC-CeEEEEECCCCC
Confidence 456999999999999999999999999888777765543221111110 011345578898877643 234443211111
Q ss_pred CC-----CCc-----ceEEecCCCeEEEEEEEEcCCCCCCC
Q psy15979 96 NE-----PSP-----MSNQLTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 96 ~~-----~~~-----~~~~L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
.. ... ......+.+.|+| .|.|.+|....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~d~G~Y~C--~A~N~~G~~~~ 219 (527)
T 3qs9_E 181 ESCKEESPAVVKKEEKVLHELFGTDIRC--CARNELGRECT 219 (527)
T ss_dssp ---------CEEECCSEECCCCSSCEEE--EEECSSCEEEE
T ss_pred ccccccCCcEEEEeeeeccccCCEEEEE--EEEeCCCcccc
Confidence 00 000 1122345889999 78999997654
No 260
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.59 E-value=3.7e-07 Score=68.16 Aligned_cols=86 Identities=15% Similarity=0.216 Sum_probs=51.4
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCce------EEEEEEecCC-----------CCceeecCCC--
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKH------RAYLELSGKP-----------NPAIFRSHPQ-- 64 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~------~~~~~v~~~P-----------~p~~~~~~~~-- 64 (152)
.+|+.+.. .....+|.|.+++.+|+|.|+|.|.|..|.. ...+.|...+ .++.+...+.
T Consensus 72 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~ 151 (257)
T 3gkz_A 72 KSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIM 151 (257)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEE
T ss_pred cccEEEEEecCCceEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceE
Confidence 36787764 2456789999999999999999999973211 1234444431 1222222211
Q ss_pred -CCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 65 -GRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 65 -~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
......+.|.|.+.+..+...+ .||+.
T Consensus 152 ~v~~G~~v~L~C~~~~~~~~~~v-~W~k~ 179 (257)
T 3gkz_A 152 SASPGEKVTLTCSASSSVSSSHL-YWYQQ 179 (257)
T ss_dssp EECTTCCEEEEEEESSCCCGGGE-EEEEE
T ss_pred EEeCCCcEEEEEEEccCccceEE-EEEEE
Confidence 1246889999998765433233 34554
No 261
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=5.1e-07 Score=61.03 Aligned_cols=68 Identities=12% Similarity=0.247 Sum_probs=51.0
Q ss_pred CCCeEEEEEEec----CCCCcceEEEEEEECCCCCC----------CcceE---EecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 67 LPNSYNITWMVS----SYTPLEEFKIKYRKIPGNEP----------SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 67 ~~~~~~L~W~~~----~~~pi~~y~~~~r~~~~~~~----------~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
..+++.|.|..+ .+.+|..|.++|+....... ....+ .|.+++.|.|+|.|.|..|.|.++..
T Consensus 31 ~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 110 (134)
T 2edx_A 31 GSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSP 110 (134)
T ss_dssp SSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEESCCTTCEEEEEEEEEETTBCCCCCCC
T ss_pred CCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCC
Confidence 467999999976 23578999999988754321 11334 36669999999999999999999877
Q ss_pred ccccc
Q psy15979 130 GLIVP 134 (152)
Q Consensus 130 ~~~~~ 134 (152)
..+..
T Consensus 111 ~~~~T 115 (134)
T 2edx_A 111 VLVRT 115 (134)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 65533
No 262
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.58 E-value=1.1e-07 Score=66.35 Aligned_cols=100 Identities=9% Similarity=0.019 Sum_probs=63.4
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC-CCCCCeEEEEEEecCCCCcceEEEEEEECCCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPLEEFKIKYRKIPGN 96 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~-~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~ 96 (152)
..|.|.+++.+|+|.|+|.|.|..++....+.|...| ........ ......+.|.|.+.++.|...+.|. + .+..
T Consensus 51 ~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~--~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~-~-~g~~ 126 (170)
T 3ry4_A 51 QPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEW--LVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFF-Q-NGKS 126 (170)
T ss_dssp SSEEEEECCGGGCEEEEEEETTSBCCCCEEEEEECCS--EEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEE-E-TTEE
T ss_pred cceEEEecccccCeEEEEEEeCCCceEeEEEEEECCc--eEecCCCceeecCCeEEEEEECCCCCCCceEEEE-E-CCeE
Confidence 4578889999999999999999888877777776543 22211111 1235789999998665555555553 3 1110
Q ss_pred C---CCcceEE-----ecCCCeEEEEEEEEcCCCC
Q psy15979 97 E---PSPMSNQ-----LTGTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 97 ~---~~~~~~~-----L~~~~~Y~~rV~A~N~~G~ 123 (152)
. .....+. ..+.+.|.| .|.|.+|.
T Consensus 127 ~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~g~ 159 (170)
T 3ry4_A 127 QKFSHLDPTFSIPQANHSHSGDYHC--TGNIGYTL 159 (170)
T ss_dssp EEEESSCCEEEESSCCGGGCEEEEE--EEEETTEE
T ss_pred ccccCCCCeEEEEeccccCCEEEEE--EEEeCcCc
Confidence 0 1112233 344889998 56898884
No 263
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.58 E-value=2.9e-07 Score=61.89 Aligned_cols=68 Identities=15% Similarity=0.124 Sum_probs=52.0
Q ss_pred CCCeEEEEEEec----CCCCcceEEEEEEECCCCCCC-------cceEEecCCCeEEEEEEEEcCCCCCCCCCCccccc
Q psy15979 67 LPNSYNITWMVS----SYTPLEEFKIKYRKIPGNEPS-------PMSNQLTGTNQYQNRRLVRKRFDRGNSTNGGLIVP 134 (152)
Q Consensus 67 ~~~~~~L~W~~~----~~~pi~~y~~~~r~~~~~~~~-------~~~~~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~ 134 (152)
..+++.|+|..+ .+..|..|+|+|+........ .....|.+++.|.|+|.|.|..|.|.++....+.+
T Consensus 30 ~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T 108 (117)
T 1wj3_A 30 TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPR 108 (117)
T ss_dssp ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEEESSSEEEEECCCSSCEEEEEEEEESSCCCCBCCCEEECC
T ss_pred eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEeCCCcEEEEECCCCCEEEEEEEEECCCccCCCCCCEEEEc
Confidence 467899999975 345789999999987543211 12234888999999999999999999997765544
No 264
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=2.7e-08 Score=64.20 Aligned_cols=43 Identities=30% Similarity=0.450 Sum_probs=34.6
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+.++.+.. .+.|.|.+++.+|+|.|+|+|.|..|.....+.|.
T Consensus 53 ~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 95 (100)
T 2edj_A 53 DPRATIQE---QGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLD 95 (100)
T ss_dssp CSSCEECT---TCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEEE
T ss_pred CCCEEEcC---CCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEEE
Confidence 45666542 34799999999999999999999999887765554
No 265
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.57 E-value=6.4e-08 Score=72.91 Aligned_cols=115 Identities=10% Similarity=-0.021 Sum_probs=64.8
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecCC-CCCCCCeEEEEEEecCCCCc
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPL 83 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~~-~~~~~~~~~L~W~~~~~~pi 83 (152)
.++.+...+..+.|.|.+++.+|+|.|+|.|.|..|.....+.|. .+|.+....... .......+.|.|.+.+..+.
T Consensus 40 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~ 119 (292)
T 4dkd_C 40 PHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLE 119 (292)
T ss_dssp SSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGG
T ss_pred CceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcc
Confidence 345555556678999999999999999999999988776665554 333322211111 11235788999998763221
Q ss_pred ceEEEEEEECCCCCCC--------cceEE-----ecCCCeEEEEEEEEcCCCCC
Q psy15979 84 EEFKIKYRKIPGNEPS--------PMSNQ-----LTGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 84 ~~y~~~~r~~~~~~~~--------~~~~~-----L~~~~~Y~~rV~A~N~~G~g 124 (152)
..+.|+. ..+..... ...+. ..+.+.|.| .|.|..|..
T Consensus 120 ~~v~W~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~~~~ 170 (292)
T 4dkd_C 120 AGVSLVR-VRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQC--SALMGGRKV 170 (292)
T ss_dssp SSEEEEE-GGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEE--EECSTTSCE
T ss_pred eeEEEEe-cCCCccccCCcccccCCceEEECCCCHHHCeEEEE--EEEeCCCce
Confidence 3455543 21111100 11133 344889998 456876644
No 266
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.57 E-value=7.9e-08 Score=63.80 Aligned_cols=80 Identities=14% Similarity=0.044 Sum_probs=54.1
Q ss_pred ecCCCCceeecCCCCCCCCeEEEEEEec--CCCCcceEEEEEEECCC-CCC-------CcceE---EecCCCeEEEEEEE
Q psy15979 51 SGKPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKYRKIPG-NEP-------SPMSN---QLTGTNQYQNRRLV 117 (152)
Q Consensus 51 ~~~P~p~~~~~~~~~~~~~~~~L~W~~~--~~~pi~~y~~~~r~~~~-~~~-------~~~~~---~L~~~~~Y~~rV~A 117 (152)
...|.||..... .....+++.|.|..+ +..++..|.|+|+.... ..+ ....+ .|.+++.|+|||.|
T Consensus 13 ~~~P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 91 (117)
T 1uem_A 13 SDLPGPPSKPQV-TDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRA 91 (117)
T ss_dssp CCSCBCCCCCEE-EEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEEE
T ss_pred CCCccCCCCCEE-EEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcccccCcCEEEECCCCCCCEEEEEEEE
Confidence 355655532211 123468999999875 35688999999987642 111 11234 46669999999999
Q ss_pred EcCCCCCCCCCCcc
Q psy15979 118 RKRFDRGNSTNGGL 131 (152)
Q Consensus 118 ~N~~G~g~~s~~~~ 131 (152)
.|..|.|+++....
T Consensus 92 ~n~~G~s~~S~~~~ 105 (117)
T 1uem_A 92 INPQGLSDPSPMSD 105 (117)
T ss_dssp EETTEEEEECCCCC
T ss_pred ECCCccCCCcCCCc
Confidence 99999999886543
No 267
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.57 E-value=9e-08 Score=68.81 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=43.1
Q ss_pred cccCCCcEEEEEc-CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..+.++.+... +..+.|.|.+++.+|+|.|+|+|.|.+|.....+.|..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 208 (212)
T 2r15_A 157 ALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208 (212)
T ss_dssp EECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEE
Confidence 4566778888754 66789999999999999999999999999988777653
No 268
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=7.9e-08 Score=63.97 Aligned_cols=48 Identities=29% Similarity=0.377 Sum_probs=38.2
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEE--EEecCCCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYL--ELSGKPNP 56 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~--~v~~~P~p 56 (152)
+.|+.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+ .|...|.|
T Consensus 53 ~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 53 DSRIKQLENG---VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVP 102 (118)
T ss_dssp STTEEEEETT---EEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEECCSCC
T ss_pred CCeEEEccCC---EEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEEeCCCC
Confidence 5777776544 899999999999999999999999988764 44444444
No 269
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.57 E-value=2.1e-07 Score=60.35 Aligned_cols=52 Identities=19% Similarity=0.406 Sum_probs=41.2
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE--EEEEecCCCCc
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSGKPNPA 57 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~~~v~~~P~p~ 57 (152)
+|..+.||.+..++....|.|.+++.+|+|.|+|. +|.... .+.|.+.|.||
T Consensus 47 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 47 ELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----IGQAQSRAQLLVQGRRSGP 100 (103)
T ss_dssp BCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----CSSCBCCEEEEEECSCCCC
T ss_pred ECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----eCCceEEEEEEEeCccCCC
Confidence 46677899998777788999999999999999998 555544 45566676654
No 270
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=98.56 E-value=2.4e-06 Score=64.34 Aligned_cols=112 Identities=12% Similarity=0.130 Sum_probs=78.0
Q ss_pred cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
......+.|.++.+.-.-.+...|.|..|.... .+.+...|.+|..... .....+++.|.|..+. .++..|.++|+.
T Consensus 64 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~~l~~-~~~~~~sv~l~W~~p~-~~i~~Y~v~~~~ 141 (283)
T 1tdq_A 64 QPPLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRV-GSRTATSLDLEWDNSE-AEAQEYKVVYST 141 (283)
T ss_dssp CTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE-EEECSSCEEEEEECCS-SCCSEEEEEEEE
T ss_pred CCCCCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCCceEE-EecCCCeEEEEecCCC-CCccEEEEEEEe
Confidence 345667889999888777888899998876543 2333345555433211 1234689999999875 578899999988
Q ss_pred CCCCCC-------C---cceEE---ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 93 IPGNEP-------S---PMSNQ---LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 93 ~~~~~~-------~---~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
...... . ...+. |.+++.|.|+|.|.|..|.|.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~ 189 (283)
T 1tdq_A 142 LAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPA 189 (283)
T ss_dssp TTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred CCCCcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcce
Confidence 754331 1 22333 55699999999999999988765
No 271
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.56 E-value=1.4e-07 Score=71.09 Aligned_cols=105 Identities=13% Similarity=0.083 Sum_probs=57.8
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCc---eEEEEEEecC-CCCceeecCC-----CCCCCCeEEEEEEecCCCCcceEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGK---HRAYLELSGK-PNPAIFRSHP-----QGRLPNSYNITWMVSSYTPLEEFK 87 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~---~~~~~~v~~~-P~p~~~~~~~-----~~~~~~~~~L~W~~~~~~pi~~y~ 87 (152)
.+.|.|.+++.+|+|.|+|+|.|..|. ....+.|... |..+.....+ .......+.|.|.+....| .+.
T Consensus 50 ~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~p~~--~v~ 127 (289)
T 3mjg_X 50 SSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTDPQL--VVT 127 (289)
T ss_dssp EEEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBSCTTS--CEE
T ss_pred eEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcCCCCc--eEE
Confidence 478999999999999999999999987 3445666544 3222111100 0123578899998873222 344
Q ss_pred EEEEECCCCCC-----CcceEEecCCCeEEEEEEEEcCCCCCC
Q psy15979 88 IKYRKIPGNEP-----SPMSNQLTGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 88 ~~~r~~~~~~~-----~~~~~~L~~~~~Y~~rV~A~N~~G~g~ 125 (152)
|.+........ ........+.+.|.| .|.|..|...
T Consensus 128 w~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C--~a~n~~~~~~ 168 (289)
T 3mjg_X 128 LHEKKGDVALPVPYDHQRGFSGIFEDRSYIC--KTTIGDREVD 168 (289)
T ss_dssp EEESSCCSCCCCCEETTTEEEECCCSSEEEE--EEEETTEEEE
T ss_pred EEeCCCCCccceeecCCcCeeeeccCcEEEE--EEEeCCceee
Confidence 43322111111 011223456899999 4577666443
No 272
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.56 E-value=5.5e-07 Score=61.26 Aligned_cols=68 Identities=16% Similarity=0.265 Sum_probs=51.8
Q ss_pred CCCeEEEEEEec-CCCCcceEEEEEEECCC----CCC--------CcceE---EecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 67 LPNSYNITWMVS-SYTPLEEFKIKYRKIPG----NEP--------SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 67 ~~~~~~L~W~~~-~~~pi~~y~~~~r~~~~----~~~--------~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
.++++.|+|..+ ...+|..|.+.|+.... ..+ ...++ .|.+++.|+|+|.|.|..|.|.+|...
T Consensus 28 sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v 107 (120)
T 1ujt_A 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESK 107 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCE
T ss_pred cCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCccCCCCCCE
Confidence 568999999985 33578999999998764 111 11234 366699999999999999999999876
Q ss_pred cccc
Q psy15979 131 LIVP 134 (152)
Q Consensus 131 ~~~~ 134 (152)
.+.+
T Consensus 108 ~~~T 111 (120)
T 1ujt_A 108 TVRT 111 (120)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5533
No 273
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.56 E-value=1e-06 Score=75.49 Aligned_cols=113 Identities=11% Similarity=-0.007 Sum_probs=77.8
Q ss_pred CEeEEEEceeCCCCCEEEEEEEE--cCCCceEEE--EEEe----cCCCCceeecCCCCCCCCeEEEEEEecC----CCCc
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEAT--NPMGKHRAY--LELS----GKPNPAIFRSHPQGRLPNSYNITWMVSS----YTPL 83 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~--N~~G~~~~~--~~v~----~~P~p~~~~~~~~~~~~~~~~L~W~~~~----~~pi 83 (152)
....+.|.++.+.+...|.|.|. |..|....+ +.+. .+|.+|..... .....+++.|+|..+. ..++
T Consensus 314 ~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~~~~ 392 (731)
T 2v5y_A 314 DSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEV-VEVKSRQITIRWEPFGYNVTRCHS 392 (731)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEE-EEECSSCEEEEEECCCHHHHCSSS
T ss_pred CcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEE-EeccCCeEEEEEECCCccccccee
Confidence 34689999999999999999999 999976532 2222 23344433211 1235689999999853 3467
Q ss_pred ceEEEEEEECCCCC------------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 84 EEFKIKYRKIPGNE------------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 84 ~~y~~~~r~~~~~~------------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
..|.++|+...... .....+. |.+++.|+|+|.|.|..|.|. +...
T Consensus 393 ~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~ 453 (731)
T 2v5y_A 393 YNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQEL 453 (731)
T ss_dssp CEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCE
T ss_pred eeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceE
Confidence 78999998764221 1123344 556999999999999999985 4444
No 274
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=98.56 E-value=3e-06 Score=63.62 Aligned_cols=81 Identities=15% Similarity=0.250 Sum_probs=56.1
Q ss_pred cCCCCceeec---CCCCCCC--CeEEEEEEecCCC------CcceEEEEEEECCCCCCC------cce---EEecCCCeE
Q psy15979 52 GKPNPAIFRS---HPQGRLP--NSYNITWMVSSYT------PLEEFKIKYRKIPGNEPS------PMS---NQLTGTNQY 111 (152)
Q Consensus 52 ~~P~p~~~~~---~~~~~~~--~~~~L~W~~~~~~------pi~~y~~~~r~~~~~~~~------~~~---~~L~~~~~Y 111 (152)
.+|.||.... ...+... ..+.|+|..+... .++.|.|+|+......+. ... ..|.+++.|
T Consensus 129 v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~~~~~~~~~l~~L~p~t~Y 208 (236)
T 1axi_B 129 VQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEY 208 (236)
T ss_dssp BCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCCBSSSEEEEEEEETTSCE
T ss_pred cccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEeccCCCEEEEeccCCCCEE
Confidence 5688876542 1111112 4599999986432 468999999987643311 122 357779999
Q ss_pred EEEEEEEcCCC--CCCCCCCccc
Q psy15979 112 QNRRLVRKRFD--RGNSTNGGLI 132 (152)
Q Consensus 112 ~~rV~A~N~~G--~g~~s~~~~~ 132 (152)
.|+|+|++..| ||+.|....+
T Consensus 209 ~vqVRa~~~~gg~ws~WS~~~~~ 231 (236)
T 1axi_B 209 EVRVRSKQRNSGNYGEFSEVLYV 231 (236)
T ss_dssp EEEEEEEETTSSCCCCCCCCEEE
T ss_pred EEEEEEEECCCCCcCCCCCCEEE
Confidence 99999999999 9999987755
No 275
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.55 E-value=5.7e-07 Score=67.82 Aligned_cols=38 Identities=29% Similarity=0.412 Sum_probs=32.7
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (152)
++|+.+...+...+|+|.+++.+|+|.|.|.+.|..+.
T Consensus 78 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~ 115 (268)
T 1x9q_A 78 PDRFSGSGSGTDFTLKINRVEAEDLGVYFCSQSTHVPW 115 (268)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSC
T ss_pred cccEEEEcCCCEEEEEECCCChhHCEEEEEEEecCCCc
Confidence 47888876667789999999999999999999998653
No 276
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.55 E-value=1.6e-07 Score=64.95 Aligned_cols=51 Identities=22% Similarity=0.271 Sum_probs=38.6
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEE--ecCCCCc
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPA 57 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v--~~~P~p~ 57 (152)
++|+.+.. .....+|.|.+++.+|+|.|+|.|.|. |.....+.| ..+|.+|
T Consensus 90 ~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~~~~L~V~~~P~~P 143 (145)
T 1z9m_A 90 DNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKP 143 (145)
T ss_dssp CTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEEEEEEEEECCCC--
T ss_pred cCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceEEEEEEEEeCCCCC
Confidence 46777643 445778999999999999999999999 888776544 4666654
No 277
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=98.55 E-value=2e-08 Score=84.33 Aligned_cols=101 Identities=11% Similarity=0.087 Sum_probs=70.3
Q ss_pred eeCCCCCEEEEEEEEcCCCceEEE---EEEecCCCCceeecCCCCCCCCeEEEEEEecC---CCCcceEEEEEEECCCC-
Q psy15979 24 KVVASDFGNYSCEATNPMGKHRAY---LELSGKPNPAIFRSHPQGRLPNSYNITWMVSS---YTPLEEFKIKYRKIPGN- 96 (152)
Q Consensus 24 ~v~~~D~G~YtC~A~N~~G~~~~~---~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~~- 96 (152)
+....|.|.|.|++.|.+|.+... ...+.+|.+|..... ....+++.|+|..+. +.++..|.++|+.....
T Consensus 301 ~S~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl~~--~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~ 378 (536)
T 3fl7_A 301 HTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTA--VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPES 378 (536)
T ss_dssp SEECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCEEE--ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-C
T ss_pred CCCCCCCCccEEEEeccccccCCCccccccccCCCcccceEE--EecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCC
Confidence 445678999999999999987653 222356666654432 345689999999753 34789999999873211
Q ss_pred ---------C------C--CcceE---EecCCCeEEEEEEEEcCCCCCCC
Q psy15979 97 ---------E------P--SPMSN---QLTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 97 ---------~------~--~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
. . ....+ .|.+++.|+|+|.|.|..|.+.+
T Consensus 379 ~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp 428 (536)
T 3fl7_A 379 GECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVT 428 (536)
T ss_dssp CCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCS
T ss_pred CcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCC
Confidence 0 0 11233 46669999999999999998543
No 278
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.55 E-value=4.4e-08 Score=72.02 Aligned_cols=43 Identities=12% Similarity=0.033 Sum_probs=35.1
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY 47 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~ 47 (152)
.+.|+.+..++....|.|.+++.+|+|.|+|+|+|.+|+++..
T Consensus 153 ~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 153 ANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp ---CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred ccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 4567777777766778889999999999999999999999874
No 279
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.55 E-value=1.7e-07 Score=66.21 Aligned_cols=47 Identities=30% Similarity=0.449 Sum_probs=41.1
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+.++.+......+.|.|.+++.+|+|.|+|.|.|.+|.....+.|..
T Consensus 145 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 145 DGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp TSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 56788877777889999999999999999999999999888877653
No 280
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=2.7e-07 Score=61.79 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=44.7
Q ss_pred CeEEEEEEecC--CCCcceEEEEEEECCCCC------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 69 NSYNITWMVSS--YTPLEEFKIKYRKIPGNE------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 69 ~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
+++.|+|..+. +..|..|.|+|+...... .....+. |.+++.|.|+|.|.|..|.|.++.
T Consensus 31 ~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~ 101 (116)
T 2edb_A 31 NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLY 101 (116)
T ss_dssp SCEEEEECCCSCTTBCCCEEEEEEEESSTTSEEEEEETTCCEEEECSCCSSSBEEEEEEEEETTEECSCEE
T ss_pred CEEEEEEcCCCCCCCceeEEEEEEEeCCCCeEEEEeCCCeeEEEeCCCCCCCEEEEEEEEEeCCccCCCCc
Confidence 89999999753 346899999998632211 1123444 555999999999999999998764
No 281
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.54 E-value=5.2e-08 Score=65.09 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=32.4
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
..+.|.|.+++.+|+|.|+|.|.|..|.....+.|.+
T Consensus 72 ~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V 108 (122)
T 3s35_X 72 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 108 (122)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEEECCCCcccCEEEEEEEccCCCceEEEEEEEE
Confidence 3568999999999999999999999999888766653
No 282
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=98.54 E-value=1.8e-06 Score=67.62 Aligned_cols=112 Identities=15% Similarity=0.137 Sum_probs=79.5
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE-EE-EecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LE-LSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~-v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.....+.|.++.+.-.-.|...|.|..|..... +. .+..|.|..+... ....+++.|.|..+...++..|.++|+.
T Consensus 147 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~p~~l~~~--~~~~~si~l~W~~p~~~~i~~Y~v~~~~ 224 (375)
T 3t1w_A 147 SSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFT--NIGPDTMRVTWAPPPSIDLTNFLVRYSP 224 (375)
T ss_dssp TTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEE--SCCSSCEEEEEECCSSCCCCEEEEEEEE
T ss_pred CCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeeecCCCCCceeEEE--ecccCEEEEEEcCCCCCCccEEEEEEEe
Confidence 345678899999888888899999998865442 22 2234444433322 2346899999998766788999999987
Q ss_pred CCCCC-------C-CcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 93 IPGNE-------P-SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 93 ~~~~~-------~-~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
..... . ....+. |.+++.|.|+|.|.|..|.|.+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~ 271 (375)
T 3t1w_A 225 VKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 271 (375)
T ss_dssp GGGTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred CCCCCCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCcee
Confidence 65322 1 113444 566999999999999999998764
No 283
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=98.54 E-value=1.4e-06 Score=68.21 Aligned_cols=113 Identities=10% Similarity=-0.007 Sum_probs=80.0
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE-EEE-ecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LEL-SGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v-~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.....+.|.++.+.-.-.+...|.|..|..... +.. ...|.|..+... ....+++.|+|..+...++..|.++|+.
T Consensus 56 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p~p~~l~~~--~~~~~si~l~W~~~~~~~i~~Y~v~~~~ 133 (375)
T 3t1w_A 56 ADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVPQLTDLSFV--DITDSSIGLRWTPLNSSTIIGYRITVVA 133 (375)
T ss_dssp TTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCCCCSCCEEE--CCCSSEEEEECCCCCCTTEEEEEEEEEE
T ss_pred CCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCCCCceEEEE--ecCCCeEEEEEECCCCCCceEEEEEEEE
Confidence 345678899999888888889999988755432 222 234444333321 2356899999998766689999999998
Q ss_pred CCCCCC--------CcceE---EecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 93 IPGNEP--------SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 93 ~~~~~~--------~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
.+.... ....+ .|.+++.|.|+|.|.|..|.|.++..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~ 181 (375)
T 3t1w_A 134 AGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTL 181 (375)
T ss_dssp SSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred CCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeee
Confidence 654421 11333 46669999999999999999987763
No 284
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.54 E-value=2.5e-07 Score=66.82 Aligned_cols=83 Identities=14% Similarity=0.186 Sum_probs=55.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc--eE--EEEEEecCC-CCceeecCCCC---CCCCeEEEEEEe
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK--HR--AYLELSGKP-NPAIFRSHPQG---RLPNSYNITWMV 77 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~--~~--~~~~v~~~P-~p~~~~~~~~~---~~~~~~~L~W~~ 77 (152)
.+|+.+.......+|.|.+++.+|+|.|+|.|.|..|. .. ..+.|...+ .+|.+...+.. .....+.|.|.+
T Consensus 56 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~ 135 (211)
T 3tv3_L 56 PDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI 135 (211)
T ss_dssp CTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEE
T ss_pred cCcEEEEccCCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEe
Confidence 46888877777889999999999999999999999882 22 235554333 34444332211 135789999998
Q ss_pred cCCC-CcceEEE
Q psy15979 78 SSYT-PLEEFKI 88 (152)
Q Consensus 78 ~~~~-pi~~y~~ 88 (152)
.+.. |...+.|
T Consensus 136 ~g~~p~~~~v~W 147 (211)
T 3tv3_L 136 SDFYPGAVTVAW 147 (211)
T ss_dssp EEEBSSCCEEEE
T ss_pred eeecCCCeEEEE
Confidence 7643 2334444
No 285
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=98.54 E-value=2.8e-06 Score=66.23 Aligned_cols=112 Identities=14% Similarity=0.150 Sum_probs=78.6
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEe-cCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS-GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~-~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~ 92 (152)
.....+.|.++.+.-.-.|.+.|.|..|.... ...+. ..|.|..+.. ......++.|.|..+...++..|.++|+.
T Consensus 55 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~p~~l~~--~~~~~~si~l~W~~p~~~~~~~Y~v~~~~ 132 (368)
T 1fnf_A 55 ADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAVPPPTDLRF--TNIGPDTMRVTWAPPPSIDLTNFLVRYSP 132 (368)
T ss_dssp TTCCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCCCCCEEEEE--ESCCSSCEEEEEECCTTCCCSEEEEEEEE
T ss_pred CCcCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCCcCCceeEE--EEcCCCeEEEEeeCCCCCCCcEEEEEEEE
Confidence 34567888899988888889999999885443 23332 2233333332 12357899999998766789999999998
Q ss_pred CCCCC--------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 93 IPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 93 ~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
..... .....+. |.+++.|.|+|.|.|..|.|.+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~ 179 (368)
T 1fnf_A 133 VKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 179 (368)
T ss_dssp TTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred CCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeE
Confidence 65432 1123444 556999999999999999887653
No 286
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.54 E-value=1.8e-07 Score=60.00 Aligned_cols=45 Identities=31% Similarity=0.572 Sum_probs=36.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEE
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v 50 (152)
+|..++||.+...+....|.|.+++.+|+|.|+|.| |.....+.|
T Consensus 47 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l 91 (95)
T 2k1m_A 47 DISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDL 91 (95)
T ss_dssp EECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEEEE
T ss_pred ECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEEEE
Confidence 456678899988888889999999999999999999 555554444
No 287
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.54 E-value=9e-08 Score=80.82 Aligned_cols=50 Identities=24% Similarity=0.387 Sum_probs=46.6
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..+.||.+..+++..+|.|.++.++|+|.|+|+|+|.+|++++.+.|.
T Consensus 522 el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l~ 571 (573)
T 3uto_A 522 ELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLN 571 (573)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEEE
Confidence 57788999999999999999999999999999999999999999987775
No 288
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=98.53 E-value=3.9e-07 Score=58.84 Aligned_cols=63 Identities=22% Similarity=0.313 Sum_probs=47.7
Q ss_pred CCCeEEEEEEecCCCCcceEEEEEEECCCCC--------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 67 LPNSYNITWMVSSYTPLEEFKIKYRKIPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 67 ~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
..+++.|+|..+. .++..|.++|+...... .....+. |.+++.|.|+|.|.|..|.|.|....
T Consensus 14 ~~~sv~l~W~~p~-~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~ 87 (98)
T 3teu_A 14 TDTSITVSWTPPS-ATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKDNQESPPLVGT 87 (98)
T ss_dssp CSSCEEEEEECCS-SCCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEE
T ss_pred cCCEEEEEEeCCC-CcccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeCCCCCCCeEEE
Confidence 4689999999874 68899999999754322 1123444 56699999999999999999886443
No 289
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=5.9e-07 Score=60.96 Aligned_cols=68 Identities=12% Similarity=0.175 Sum_probs=49.1
Q ss_pred CCCeEEEEEEecCC--CCc----ceEEEEEEECCCCC--C-----CcceE---EecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 67 LPNSYNITWMVSSY--TPL----EEFKIKYRKIPGNE--P-----SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 67 ~~~~~~L~W~~~~~--~pi----~~y~~~~r~~~~~~--~-----~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
..+++.|.|..+.. ..+ ..|.|+|+...... . ....+ .|.+++.|+|+|+|.|..|.|.++...
T Consensus 31 s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v 110 (123)
T 2edd_A 31 THDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTA 110 (123)
T ss_dssp ETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCE
T ss_pred CCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeCCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCE
Confidence 56899999996532 223 38999999864321 1 11233 466699999999999999999999876
Q ss_pred cccc
Q psy15979 131 LIVP 134 (152)
Q Consensus 131 ~~~~ 134 (152)
.+.+
T Consensus 111 ~~~T 114 (123)
T 2edd_A 111 HATT 114 (123)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5544
No 290
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.53 E-value=1.2e-07 Score=71.32 Aligned_cols=113 Identities=15% Similarity=0.198 Sum_probs=64.1
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE--EEEE--ecCCCCceeec--CCCCCCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLEL--SGKPNPAIFRS--HPQGRLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~~~v--~~~P~p~~~~~--~~~~~~~~~~~L~W~~~~ 79 (152)
+.++.+.. .+.|.|.+++.+|+|.|+|.|.|..+.... .+.| ..+|....... .........+.|.|.+.+
T Consensus 146 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g 222 (291)
T 1qz1_A 146 DVRFIVLS---NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADG 222 (291)
T ss_dssp CTTEEECT---TSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEE
T ss_pred CceEEEcc---CCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEE
Confidence 45565542 347999999999999999999998754322 3333 33332110000 001124678999999876
Q ss_pred CCCcceEEEEEE--ECCCCC---------CCcceEEec-----CCCeEEEEEEEEcCCCCC
Q psy15979 80 YTPLEEFKIKYR--KIPGNE---------PSPMSNQLT-----GTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 80 ~~pi~~y~~~~r--~~~~~~---------~~~~~~~L~-----~~~~Y~~rV~A~N~~G~g 124 (152)
.++. .+.|... ...... .....+.|. +.+.|.| .|.|.+|..
T Consensus 223 ~p~p-~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~N~~G~~ 280 (291)
T 1qz1_A 223 FPEP-TMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVC--IAENKAGEQ 280 (291)
T ss_dssp ESCC-EEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEE--EEEETTEEE
T ss_pred eCCC-cEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEE--EEEeCCCce
Confidence 5443 3554321 111110 001223333 3788988 779999975
No 291
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.53 E-value=1.5e-07 Score=71.54 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=43.5
Q ss_pred cccCCCcEEEEEc-CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 2 RLETTERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 2 ~l~~~~r~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+|..+.++.+... +....|.|.+++.+|+|.|+|.|.|.+|.....+.|..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 313 (317)
T 2y25_A 262 ALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 313 (317)
T ss_dssp EECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 4667788888654 66789999999999999999999999999998877653
No 292
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=98.53 E-value=7.1e-07 Score=58.12 Aligned_cols=72 Identities=21% Similarity=0.312 Sum_probs=51.3
Q ss_pred CCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCC-CCC-------CcceEE---ecCCCeEEEEEEEEcCCC
Q psy15979 54 PNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG-NEP-------SPMSNQ---LTGTNQYQNRRLVRKRFD 122 (152)
Q Consensus 54 P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~-~~~-------~~~~~~---L~~~~~Y~~rV~A~N~~G 122 (152)
|.|..+... ..+.+++.|+|..+. .++..|.+.|+.... ... ...++. |.+++.|.|+|.|.|..|
T Consensus 3 p~P~~l~v~--~~t~~Sv~lsW~~p~-~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~~g 79 (98)
T 3tes_A 3 PAPKNLVVS--EVTEDSLRLSWTAPD-AAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKGGH 79 (98)
T ss_dssp CCCEEEEEE--SCCSSCEEEEEECCT-TSCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCCCceEEE--ecCCCeEEEEecCCc-CccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeCCc
Confidence 444444332 345789999999865 478899999998753 111 123444 566999999999999999
Q ss_pred CCCCCC
Q psy15979 123 RGNSTN 128 (152)
Q Consensus 123 ~g~~s~ 128 (152)
.|+|..
T Consensus 80 ~S~p~~ 85 (98)
T 3tes_A 80 RSNPLS 85 (98)
T ss_dssp EBCCEE
T ss_pred ccCCEE
Confidence 998864
No 293
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.53 E-value=2.7e-07 Score=65.47 Aligned_cols=105 Identities=18% Similarity=0.229 Sum_probs=62.4
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEE---EEEec------CCCCceeecCCC---CCCCCeEEEEEEecCCCCcc
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAY---LELSG------KPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLE 84 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~---~~v~~------~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~pi~ 84 (152)
.+.|.|.+++.+|+|.|+|.|.|..|..... +.+.. .+.||.+..... ......+.|.|.+.+.++ .
T Consensus 65 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p 143 (201)
T 3s97_C 65 NGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV-P 143 (201)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESC-C
T ss_pred CCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCC-C
Confidence 4679999999999999999999988877652 22221 122333322111 123577899999876543 2
Q ss_pred eEEEEEEECCCCC------CCcceEEe-----cCCCeEEEEEEEEcCCCCCC
Q psy15979 85 EFKIKYRKIPGNE------PSPMSNQL-----TGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 85 ~y~~~~r~~~~~~------~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~ 125 (152)
.+.| ++....-. .....+.| .+.+.|.| .|.|.+|...
T Consensus 144 ~v~W-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~g~~~ 192 (201)
T 3s97_C 144 DIRW-RKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYEC--EAENIRGKDK 192 (201)
T ss_dssp EEEE-EETTBCCCTTCEEETTTTEEEECSCCGGGCEEEEE--EEEETTEEEE
T ss_pred ceEE-EeCCCcCCCceeecCCCCEEEEccCChhhCEEEEE--EEEecCCcee
Confidence 3444 33221110 01123333 33789988 6799998763
No 294
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.53 E-value=8.1e-08 Score=69.75 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=63.7
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEE--EEEEecCCCCceeecCCC--CCCCCeEEEEEEe-cCCCCcceEEEEEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSGKPNPAIFRSHPQ--GRLPNSYNITWMV-SSYTPLEEFKIKYR 91 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~-~~~~pi~~y~~~~r 91 (152)
..+|.|.+++.+|+|.|+|.+.|. |.... .+.|...|.+|.+...+. ......+.|.|.+ .+.+ ...+.| ++
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P-~~~v~W-~~ 147 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYP-EAEVFW-KD 147 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBS-CCEEEE-EC
T ss_pred eEEEEECCcccccCEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccC-CCeEEE-Ec
Confidence 567999999999999999999986 33333 344445555455443221 1235789999998 4443 333443 33
Q ss_pred ECCCCCCC----------c--------ceEEecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 92 KIPGNEPS----------P--------MSNQLTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 92 ~~~~~~~~----------~--------~~~~L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
..+..... . ......+.+.|.| .|.|.+|....+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C--~a~n~~g~~~~~~~ 201 (222)
T 4i0k_A 148 GQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSC--LVRNPVLQQDAHGS 201 (222)
T ss_dssp TTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEE--EEEETTTTEEEEEE
T ss_pred CCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEE--EEECCCCCCceEEE
Confidence 12111000 0 1113345789998 66999997654433
No 295
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.52 E-value=3.9e-07 Score=60.97 Aligned_cols=82 Identities=12% Similarity=0.084 Sum_probs=54.2
Q ss_pred CCCCceeecCCCCCCCCeEEEEEEecCC--CCc----ceEEEEEEECCCCC-------CCcceE---EecCCCeEEEEEE
Q psy15979 53 KPNPAIFRSHPQGRLPNSYNITWMVSSY--TPL----EEFKIKYRKIPGNE-------PSPMSN---QLTGTNQYQNRRL 116 (152)
Q Consensus 53 ~P~p~~~~~~~~~~~~~~~~L~W~~~~~--~pi----~~y~~~~r~~~~~~-------~~~~~~---~L~~~~~Y~~rV~ 116 (152)
+|.||..... ...+.+++.|+|..+.. .++ ..|.|.|+...... .....+ .|.+++.|+|+|+
T Consensus 8 pp~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~gL~P~T~Y~f~V~ 86 (113)
T 1x5j_A 8 PMMPPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVM 86 (113)
T ss_dssp CCCCCEEEEE-EEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEEE
T ss_pred CCCCCcceEE-EEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEEEecCcCEEEeCCCCCCcEEEEEEE
Confidence 4555543321 12357899999997532 233 38999998732211 111233 4666999999999
Q ss_pred EEcCCCCCCCCCCcccccc
Q psy15979 117 VRKRFDRGNSTNGGLIVPK 135 (152)
Q Consensus 117 A~N~~G~g~~s~~~~~~~~ 135 (152)
|.|..|.|.++....+.++
T Consensus 87 A~~~~G~g~~S~~v~~~T~ 105 (113)
T 1x5j_A 87 VTKGRRSSTWSMTAHGTTF 105 (113)
T ss_dssp EECSSCBCCCCCCCCEECC
T ss_pred EecCCccCCCcccEEeecc
Confidence 9999999999987766543
No 296
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=98.52 E-value=2.4e-06 Score=66.62 Aligned_cols=113 Identities=16% Similarity=0.160 Sum_probs=78.5
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEE-EEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEEC
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYL-ELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~-~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~ 93 (152)
.......|.++.+.-.-.+...|.|..|...... .....|.+|..... .....+++.|+|..+.. ++..|.+.|+..
T Consensus 236 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~ 313 (368)
T 1fnf_A 236 HSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDLEV-VAATPTSLLISWDAPAV-TVRYYRITYGET 313 (368)
T ss_dssp TTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCSCEEEEE-EEEETTEEEEEEECCSS-CCSEEEEEEEET
T ss_pred CCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCCCCeeEE-EecCCCEEEEEeeCCCC-ccceEEEEEEEC
Confidence 3456788889988777778889999988655432 23345555432211 12246899999998654 688999999987
Q ss_pred CCCCC--------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 94 PGNEP--------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 94 ~~~~~--------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
..... ....+. |.+++.|.|+|.|.|..|.|.++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~~ 360 (368)
T 1fnf_A 314 GGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSK 360 (368)
T ss_dssp TCCSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBCC
T ss_pred CCCCccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccCc
Confidence 54321 113343 5569999999999999999987753
No 297
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=98.52 E-value=5.8e-07 Score=65.14 Aligned_cols=82 Identities=10% Similarity=0.099 Sum_probs=56.8
Q ss_pred EecCCCCceeecCCCCCCCCeEEEEEEec---CCCCcceEEEEEEECCCCCCCc-----------ceEE---ecCCCeEE
Q psy15979 50 LSGKPNPAIFRSHPQGRLPNSYNITWMVS---SYTPLEEFKIKYRKIPGNEPSP-----------MSNQ---LTGTNQYQ 112 (152)
Q Consensus 50 v~~~P~p~~~~~~~~~~~~~~~~L~W~~~---~~~pi~~y~~~~r~~~~~~~~~-----------~~~~---L~~~~~Y~ 112 (152)
..+.|.+|..... .....++.|+|..+ ++.++..|.++|+......+.. ..+. |.+++.|+
T Consensus 5 ~~~~P~~P~~~~~--~~~~~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 82 (209)
T 2vkw_A 5 QADTPSSPSIDQV--EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYA 82 (209)
T ss_dssp CCCCCCCCEEEEE--EECSSCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEE
T ss_pred ccCCCcCCcccEe--eeccCeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEE
Confidence 3466776654321 11223689999986 3457999999999876544311 2444 56699999
Q ss_pred EEEEEEcCCCCCCCCCCcccc
Q psy15979 113 NRRLVRKRFDRGNSTNGGLIV 133 (152)
Q Consensus 113 ~rV~A~N~~G~g~~s~~~~~~ 133 (152)
|||.|.|..|.|.++....+.
T Consensus 83 ~~V~A~n~~G~~~~s~~~~~~ 103 (209)
T 2vkw_A 83 VRLAALNGKGLGEISAASEFK 103 (209)
T ss_dssp EEEEEEETTEECCCCCCEEEE
T ss_pred EEEEEEcCCcccCCccccccc
Confidence 999999999999988766443
No 298
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.51 E-value=8.3e-07 Score=70.15 Aligned_cols=106 Identities=21% Similarity=0.262 Sum_probs=61.8
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEE-----EEEe-----cCCCCceeecCCC---CCCCCeEEEEEEecCCCCc
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAY-----LELS-----GKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPL 83 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-----~~v~-----~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~pi 83 (152)
.+.|.|.+++.+|+|.|+|+|.|..|..... +.+. ....|......+. ......+.|.|.+.+.++
T Consensus 156 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~- 234 (384)
T 3kld_A 156 TGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPV- 234 (384)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESC-
T ss_pred CCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCC-
Confidence 4579999999999999999999999876531 1111 1111211111111 123678999999876543
Q ss_pred ceEEEEEEECCCCC-------CCcceEEe-----cCCCeEEEEEEEEcCCCCCCC
Q psy15979 84 EEFKIKYRKIPGNE-------PSPMSNQL-----TGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 84 ~~y~~~~r~~~~~~-------~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
..+.| ++..+... .....+.| ++.+.|.| .|.|..|....
T Consensus 235 p~i~W-~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C--~a~N~~G~~~~ 286 (384)
T 3kld_A 235 PTILW-RRADGKPIARKARRHKSNGILEIPNFQQEDAGSYEC--VAENSRGKNVA 286 (384)
T ss_dssp CEEEE-EETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEE--EEEETTEEEEE
T ss_pred CcEEE-EeCCCccccccceecCCCcEEEECCCChhhCEEEEE--EEEcCCCeEEE
Confidence 23333 33222110 11122333 34889998 78999997543
No 299
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=98.51 E-value=2.5e-06 Score=64.26 Aligned_cols=109 Identities=11% Similarity=0.142 Sum_probs=75.8
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEecCC-CCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELSGKP-NPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIP 94 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~~~P-~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~ 94 (152)
.....|.++.+.-.-.+...|.|..|.... .+.....| .|..+... ....+++.|.|..+. .++..|.++|+...
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~P~~l~~~--~~~~~sv~l~W~~p~-~~i~~Y~v~~~~~~ 235 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMVT--ASSETSISLIWTKAS-GPIDHYRITFTPSS 235 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEE--EECSSCEEEEEECCC-SCCSEEEEEEECSS
T ss_pred cceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCCCCccEEe--EecCCEEEEEEeCCC-CcccEEEEEEEcCC
Confidence 567889999888888889999998885543 23333333 33333321 224688999999764 57889999998765
Q ss_pred CCC------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 95 GNE------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 95 ~~~------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
... .....+. |.+++.|.|+|.|.|..|.|.++.
T Consensus 236 ~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~ 278 (283)
T 1tdq_A 236 GISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLEST 278 (283)
T ss_dssp SCCEEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCEE
T ss_pred CCeeEEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCccee
Confidence 432 1113344 556999999999999999998763
No 300
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=4.2e-07 Score=60.39 Aligned_cols=69 Identities=10% Similarity=0.224 Sum_probs=50.9
Q ss_pred CCCCeEEEEEEecC--CCCcceEEEEEEECCCCC---------CCcceE---EecCCCeEEEEEEEEcCCCCCCCCCCcc
Q psy15979 66 RLPNSYNITWMVSS--YTPLEEFKIKYRKIPGNE---------PSPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGL 131 (152)
Q Consensus 66 ~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~---------~~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~ 131 (152)
...+++.|.|..+. ..+|..|.++|+...... .....+ .|.+++.|.|||.|.|..|.|.++....
T Consensus 30 ~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~ 109 (121)
T 2dlh_A 30 LSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQ 109 (121)
T ss_dssp CSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCSEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEE
T ss_pred cCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEEecCCceEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEE
Confidence 35689999999863 357889999998754321 111233 4666999999999999999999987665
Q ss_pred ccc
Q psy15979 132 IVP 134 (152)
Q Consensus 132 ~~~ 134 (152)
+.+
T Consensus 110 ~~T 112 (121)
T 2dlh_A 110 VIT 112 (121)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 301
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.50 E-value=7e-07 Score=58.76 Aligned_cols=74 Identities=12% Similarity=0.080 Sum_probs=51.0
Q ss_pred CCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCC------CCcceEE---ecCCCeEEEEEEEEcCCCC
Q psy15979 53 KPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE------PSPMSNQ---LTGTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 53 ~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~------~~~~~~~---L~~~~~Y~~rV~A~N~~G~ 123 (152)
.|.||..... .....+++.|+|..+. .++..|.|.|+...... ....++. |.+++.|.|+|.|.|..|.
T Consensus 7 ~p~~P~~l~v-~~~~~~sv~lsW~~p~-~~i~~Y~i~y~~~~~~~~~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~g~ 84 (105)
T 2cum_A 7 GLEAPRDLEA-KEVTPRTALLTWTEPP-VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSL 84 (105)
T ss_dssp TCCCCEEEEE-ESCCSSCEEEEEECCS-SCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTTBC
T ss_pred CCCCCCceEE-EeccCCEEEEEEcCCC-CccceEEEEEEeCCCceEEEEECCCccEEEECCCCCCCEEEEEEEEEeCCcc
Confidence 4555543321 1234689999999765 37899999998754321 1123454 5559999999999999999
Q ss_pred CCCCC
Q psy15979 124 GNSTN 128 (152)
Q Consensus 124 g~~s~ 128 (152)
|.+..
T Consensus 85 s~~~~ 89 (105)
T 2cum_A 85 LPPVS 89 (105)
T ss_dssp CCCEE
T ss_pred cCCEE
Confidence 98753
No 302
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.50 E-value=2.1e-07 Score=62.73 Aligned_cols=50 Identities=10% Similarity=0.175 Sum_probs=38.0
Q ss_pred CCCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCC
Q psy15979 5 TTERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPN 55 (152)
Q Consensus 5 ~~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~ 55 (152)
.++|+.+.. .....+|.|.+++.+|+|.|+|.|.|. |.....+.|. ++|.
T Consensus 52 ~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 52 KNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIVLATMK 104 (124)
T ss_dssp CSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SEEEEEEEEEEECC--
T ss_pred cCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CCCcEEEEEEEEeCCC
Confidence 456777653 345689999999999999999999999 9888865555 4443
No 303
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.50 E-value=1.2e-06 Score=62.29 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=60.4
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEE-EEEe--cCCCCceeecCC-CCCCCCeEEEEEEecCCCCcceEEEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LELS--GKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPLEEFKIKYR 91 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v~--~~P~p~~~~~~~-~~~~~~~~~L~W~~~~~~pi~~y~~~~r 91 (152)
...+|.|.+++.+|+|.|.|.+.|..+..... ..+. ..|.+....... .......+.+.|.+.+.++. .+.| ++
T Consensus 77 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p-~i~W-~~ 154 (218)
T 4frw_A 77 LDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP-SVTW-DT 154 (218)
T ss_dssp TBCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC-EEEE-EE
T ss_pred CeEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCc-eEEE-EE
Confidence 34679999999999999999999987755553 2222 222222211111 12235677888887665443 3333 33
Q ss_pred ECCCCC-------CC----cceEEecC-----CCeEEEEEEEEcCCCCCC
Q psy15979 92 KIPGNE-------PS----PMSNQLTG-----TNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 92 ~~~~~~-------~~----~~~~~L~~-----~~~Y~~rV~A~N~~G~g~ 125 (152)
....-. .. ...+.|.+ ++.|.| .|.|..|..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC--~a~N~~g~~~ 202 (218)
T 4frw_A 155 EVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTC--VVSHPGLLQD 202 (218)
T ss_dssp SSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEE--EEECTTCSSC
T ss_pred CCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEE--EEEeCCCCeE
Confidence 221100 00 01233433 789999 6689988754
No 304
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.49 E-value=1.2e-07 Score=61.46 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=34.2
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (152)
+|..+.++.+...+....|.|.+++.+|+|.|+|.|.|..
T Consensus 50 ~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~ 89 (102)
T 2eo1_A 50 KLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQQ 89 (102)
T ss_dssp ECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETTEE
T ss_pred ECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCCCc
Confidence 4566778999887778899999999999999999997643
No 305
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.49 E-value=9.8e-07 Score=72.19 Aligned_cols=65 Identities=11% Similarity=0.201 Sum_probs=46.7
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC----CCCCCeEEEEEEecCCCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ----GRLPNSYNITWMVSSYTP 82 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~----~~~~~~~~L~W~~~~~~p 82 (152)
.+.|.|.+++.+| |.|+|.|.|..|.......|.....|..+...+. ......+.|.|.+.+..|
T Consensus 280 ~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p 348 (523)
T 2rcj_C 280 SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSH 348 (523)
T ss_pred EEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccC
Confidence 3589999999999 9999999999999877766654333433332221 123678999999976543
No 306
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.49 E-value=5.6e-08 Score=76.14 Aligned_cols=107 Identities=12% Similarity=0.133 Sum_probs=68.5
Q ss_pred CCEeEEEEceeCCCCCE-EEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEE-
Q psy15979 15 GSRHTLMIRKVVASDFG-NYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRK- 92 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G-~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~- 92 (152)
...++|.|.+++.+|+| .|+|+|.|..|.....+.|.....|..+...+ .....+.|.|.+.+.++ ..+.|. +.
T Consensus 209 ~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i~~~~~--~~g~~v~l~C~~~g~P~-p~i~W~-~~g 284 (347)
T 2ifg_A 209 LPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTA--VEMHHWCIPFSVDGQPA-PSLRWL-FNG 284 (347)
T ss_dssp SSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEEEECCC--EESSSEEEEEEEEEESC-CEEEEE-ETT
T ss_pred cccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCeeeeccC--ccCceEEEEEEeeecCC-CcEEEE-eCC
Confidence 35778999999999999 99999999999998877766543332222211 23578899999877633 345543 22
Q ss_pred --CCCCCC--------------CcceEEec-----CCCeEEEEEEEEcCCCCCCCC
Q psy15979 93 --IPGNEP--------------SPMSNQLT-----GTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 93 --~~~~~~--------------~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~s 127 (152)
...... ...+..|. +.+.|.| .|.|.+|....+
T Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C--~a~N~~G~~~~~ 338 (347)
T 2ifg_A 285 SVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTL--LAANPFGQASAS 338 (347)
T ss_dssp EECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEE--EEEETTEEEEEE
T ss_pred EECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEE--EEecCCCceeeE
Confidence 111100 01113333 3788988 789999976433
No 307
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.48 E-value=1.1e-07 Score=69.68 Aligned_cols=76 Identities=13% Similarity=0.267 Sum_probs=42.9
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCCCceeec-CCC--CCCCCeEEEEEEecCC
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSSY 80 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~-~~~--~~~~~~~~L~W~~~~~ 80 (152)
+|+.+...+...+|.|.+++.+|+|.|.|.|.|..|.... .+.|...+.+|.+.. .+. ......+.|.|.+.+.
T Consensus 82 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~ 161 (233)
T 3bqu_C 82 SRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 161 (233)
T ss_dssp TTCCCCEEEEEEEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ccEEeeccCCEEEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccc
Confidence 5665544445568999999999999999999998764321 344544443444432 111 1125689999998764
Q ss_pred CC
Q psy15979 81 TP 82 (152)
Q Consensus 81 ~p 82 (152)
.|
T Consensus 162 ~p 163 (233)
T 3bqu_C 162 YP 163 (233)
T ss_dssp BS
T ss_pred cC
Confidence 33
No 308
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.48 E-value=5.1e-07 Score=68.82 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=29.3
Q ss_pred CcEEEE--EcCCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 7 ERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 7 ~r~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
+|+.+. ......+|.|.+++.+|+|.|.|.+.|.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 66 GRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPS 101 (280)
T ss_dssp TTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSS
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 578776 3456678999999999999999999997
No 309
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=1.4e-07 Score=64.20 Aligned_cols=46 Identities=22% Similarity=0.175 Sum_probs=36.5
Q ss_pred CCcEEEEEc--C----CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 6 TERRIMETR--G----SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 6 ~~r~~i~~~--~----~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+.++++... . ....|.|.+++.+|+|.|+|.|.|..|.+++...|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~ 113 (118)
T 2edn_A 62 GARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNID 113 (118)
T ss_dssp TSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSSCEEEEEECCE
T ss_pred ccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcCCcEEEEEEEE
Confidence 456666421 1 257899999999999999999999999988876654
No 310
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=98.47 E-value=6.8e-06 Score=62.24 Aligned_cols=110 Identities=13% Similarity=0.151 Sum_probs=76.4
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE-EEEe--cCCCCc-eeecCCCCCCCCeEEEEEEecCCCCcceEEEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LELS--GKPNPA-IFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKY 90 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v~--~~P~p~-~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~ 90 (152)
.....+.|.++.+.-.-.+...|.|..|..... ..+. ..|.+| .+... ....+++.|.|..+. .++..|.++|
T Consensus 71 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~--~~~~~sv~l~W~~p~-~~~~~Y~v~~ 147 (290)
T 3r8q_A 71 PDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVT--DATETTITISWRTKT-ETITGFQVDA 147 (290)
T ss_dssp TTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEE--EECSSCEEEEEECCS-CCCCEEEEEE
T ss_pred CCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEE--EcCCCeEEEEEeCCC-CcccEEEEEE
Confidence 445678899998888788889999998865442 2222 123333 22221 235689999999864 4788999999
Q ss_pred EECCCCCC-------CcceEE---ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 91 RKIPGNEP-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 91 r~~~~~~~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
+....... ...++. |.+++.|.|+|.|.|..|.|.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~ 194 (290)
T 3r8q_A 148 VPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPV 194 (290)
T ss_dssp EESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred EECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCE
Confidence 88654431 123444 55699999999999999998764
No 311
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.47 E-value=1.9e-06 Score=71.51 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=50.6
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce-EEE--EEEecCCCCceeecCCC--CCCCCeEEEEEEecCCC
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-RAY--LELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYT 81 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~~~--~~v~~~P~p~~~~~~~~--~~~~~~~~L~W~~~~~~ 81 (152)
.|+.+.. .++|.|.+++.+|+|.|+|++.|..|.. ... +.|..+|.+|.+..... ......+.|.|.+.+..
T Consensus 424 ~r~~~~~---~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~ 500 (581)
T 3o3u_N 424 SVARVLP---NGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSY 500 (581)
T ss_dssp GTSEECT---TSCEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEB
T ss_pred CcEEEcC---CceEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCC
Confidence 3555542 2379999999999999999999999987 444 44555665555443221 11234556789876632
Q ss_pred CcceEEE
Q psy15979 82 PLEEFKI 88 (152)
Q Consensus 82 pi~~y~~ 88 (152)
|...+.|
T Consensus 501 P~~~i~W 507 (581)
T 3o3u_N 501 PAGTLSW 507 (581)
T ss_dssp SCCEEEE
T ss_pred CCCeEEE
Confidence 3334444
No 312
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.47 E-value=1.1e-06 Score=63.72 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=49.7
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCce------EEEEEEecC-CCCceee-cCC--CCCCCCeEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH------RAYLELSGK-PNPAIFR-SHP--QGRLPNSYNI 73 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~------~~~~~v~~~-P~p~~~~-~~~--~~~~~~~~~L 73 (152)
.+|+.+..+ +...+|.|.+++.+|+|.|+|.|.|..|.. ...+.|... +.+|.+. ..+ .......+.|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 144 (219)
T 1c1e_H 65 KGRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTL 144 (219)
T ss_dssp CSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEE
Confidence 468887643 346789999999999999999999987432 123555542 3333332 221 1224678999
Q ss_pred EEEecC
Q psy15979 74 TWMVSS 79 (152)
Q Consensus 74 ~W~~~~ 79 (152)
.|.+.+
T Consensus 145 ~C~~~g 150 (219)
T 1c1e_H 145 GCLVKG 150 (219)
T ss_dssp EEEEEE
T ss_pred EEEccc
Confidence 999877
No 313
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.47 E-value=2.1e-07 Score=64.14 Aligned_cols=52 Identities=25% Similarity=0.305 Sum_probs=36.7
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceE------EEEEEecCCCC
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR------AYLELSGKPNP 56 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~------~~~~v~~~P~p 56 (152)
.++||.+..++...+|.|.+++.+|+|.|.|.|.|..|... +.+.|.+.|.+
T Consensus 64 ~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g~~~~~~g~gt~L~V~~~p~~ 121 (133)
T 3khq_A 64 EEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSANHNVTDSCGTELLVLGFSTL 121 (133)
T ss_dssp TTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC-------CCCEEEEEC-----
T ss_pred eCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCCCcceeECCCEEEEEEecccc
Confidence 46799888777788999999999999999999999987322 24566665544
No 314
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.46 E-value=3.8e-07 Score=61.96 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=45.8
Q ss_pred CeEEEEEEecC--CCCcceEEEEEEECCCCC------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 69 NSYNITWMVSS--YTPLEEFKIKYRKIPGNE------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 69 ~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
+++.|+|..+. +.+|..|.|+|+...... .....+. |.+++.|.|+|.|.|..|.|.++...
T Consensus 41 ~sv~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~ 113 (126)
T 1x5i_A 41 TSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYES 113 (126)
T ss_dssp TEEEEEEECCSCTTBCCCEEEEEECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCC
T ss_pred CEEEEEEcCCCCCCCCEeEEEEEEEcCCCCceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceeeE
Confidence 89999999863 357899999998421110 1123444 55699999999999999999988644
No 315
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.46 E-value=7.2e-08 Score=69.19 Aligned_cols=103 Identities=14% Similarity=0.077 Sum_probs=57.6
Q ss_pred EEEceeCCCCCEEEEEEEEcCCCceE---EEEEEecCCCCceeecCC-CCCCCCeEEEEEEe-cCCCCcceEEEEEEEC-
Q psy15979 20 LMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRSHP-QGRLPNSYNITWMV-SSYTPLEEFKIKYRKI- 93 (152)
Q Consensus 20 L~I~~v~~~D~G~YtC~A~N~~G~~~---~~~~v~~~P~p~~~~~~~-~~~~~~~~~L~W~~-~~~~pi~~y~~~~r~~- 93 (152)
|.|.+++.+|+|.|+|.|.|..|... ..+.|...|.+....... .......+.|.|.+ .+.+ ...+.|. +..
T Consensus 74 l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~v~W~-~~~~ 151 (212)
T 2v9r_A 74 IVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHP-EPTISWK-KDGS 151 (212)
T ss_dssp CCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEES-CCEEEEE-ETTE
T ss_pred EEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCC-CCEEEEE-ECCc
Confidence 44567799999999999999999763 244444333211110000 01235788999987 4443 3345543 221
Q ss_pred --CCCCC----CcceEEec-----CCCeEEEEEEEEcCCCCCCC
Q psy15979 94 --PGNEP----SPMSNQLT-----GTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 94 --~~~~~----~~~~~~L~-----~~~~Y~~rV~A~N~~G~g~~ 126 (152)
..... ....+.|. +.+.|.| .|.|.+|....
T Consensus 152 ~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~g~~~s 193 (212)
T 2v9r_A 152 PLDDKDERITIRGGKLMITYTRKSDAGKYVC--VGTNMVGERES 193 (212)
T ss_dssp EECTTSTTEEEETTEEEESSCCGGGCEEEEE--EEEETTEEEEC
T ss_pred cCCCCcceEEccCCeEEEeeCCHhhCeeEEE--EEecccCceec
Confidence 11110 01233333 3788988 77999997644
No 316
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.46 E-value=1.5e-07 Score=61.95 Aligned_cols=40 Identities=23% Similarity=0.433 Sum_probs=33.2
Q ss_pred cccCC-CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCC
Q psy15979 2 RLETT-ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (152)
Q Consensus 2 ~l~~~-~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (152)
+|..+ .||.+..++....|.|.+++.+|+|.|+|.|.|..
T Consensus 55 ~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 95 (104)
T 1pd6_A 55 EIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGEK 95 (104)
T ss_dssp EECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETTEE
T ss_pred ECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECCCc
Confidence 35555 78888877778899999999999999999995533
No 317
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.46 E-value=4e-07 Score=61.32 Aligned_cols=54 Identities=22% Similarity=0.315 Sum_probs=39.9
Q ss_pred CcccCCC----------cEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCC
Q psy15979 1 MRLETTE----------RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55 (152)
Q Consensus 1 ~~l~~~~----------r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~ 55 (152)
++|+.++ ||.+..++..+.|+|.+++.+|+|.|+|...+.. ...+.+.|..+|.
T Consensus 45 ~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~~~-~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 45 EELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPGV-QDSAALTIQESSG 108 (112)
T ss_dssp CBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEETTE-EEEEEEEEECSSC
T ss_pred EECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEECCe-eEEEEEEEeCCCc
Confidence 3576766 9999888888999999999999999987544433 2344566655553
No 318
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.46 E-value=6.3e-07 Score=77.13 Aligned_cols=107 Identities=17% Similarity=0.198 Sum_probs=65.8
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceEEEEEEECCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~ 95 (152)
++|.|.+++.+|+|.|+|.|.|..|.....+.|.....|....... .......+.|.|.+.+.+ ...+.| ++....
T Consensus 306 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p-~~~v~W-~k~g~~ 383 (816)
T 3dmk_A 306 GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNP-IKTVSW-MKDGKA 383 (816)
T ss_dssp TEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEEC-CCEEEE-EETTEE
T ss_pred ceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccC-CCEEEE-EECCEE
Confidence 4899999999999999999999999887766655432221111111 112467899999987653 334444 332110
Q ss_pred CCCCcceEEe-----cCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 96 NEPSPMSNQL-----TGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 96 ~~~~~~~~~L-----~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
-......+.| .+.+.|.| .|.|..|....+.
T Consensus 384 ~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~g~~~~~~ 419 (816)
T 3dmk_A 384 IGHSESVLRIESVKKEDKGMYQC--FVRNDRESAEASA 419 (816)
T ss_dssp CSCCSSEEEESSCCGGGCEEEEE--EEECSSCEEEECC
T ss_pred CCCCCCEEEEcCCCHHHCEEEEE--EEECCCCcEEEEE
Confidence 0111223333 34788888 6689888655443
No 319
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.45 E-value=5.3e-06 Score=60.41 Aligned_cols=76 Identities=14% Similarity=0.234 Sum_probs=49.4
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCC-----CceEEEEEEec-CCCCceee-cCC-CCCCCCeEEEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM-----GKHRAYLELSG-KPNPAIFR-SHP-QGRLPNSYNITW 75 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~-----G~~~~~~~v~~-~P~p~~~~-~~~-~~~~~~~~~L~W 75 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|.. |.. ..+.|.. .+.+|.+. ..+ .......+.|.|
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~-~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C 145 (221)
T 3m8o_H 67 RGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQG-TLVTVSSASPTSPKVFPLSLCSTQPDGNVVIAC 145 (221)
T ss_dssp TTSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESCTTCCCBBCC-EEEEECSCCCBCCEEEEEECCSCCCTTEEEEEE
T ss_pred cccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECCChhheECCC-EEEEEecCCCCCCeEEEecCcccccCCCEEEEE
Confidence 378888643 456789999999999999999999963 222 2455542 23333332 111 113467899999
Q ss_pred EecCCCC
Q psy15979 76 MVSSYTP 82 (152)
Q Consensus 76 ~~~~~~p 82 (152)
.+.+..|
T Consensus 146 ~~~~~~P 152 (221)
T 3m8o_H 146 LVQGFFP 152 (221)
T ss_dssp EEEEEBS
T ss_pred EEEeeEC
Confidence 9876333
No 320
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.45 E-value=1.3e-06 Score=61.53 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=61.0
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGN 96 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~ 96 (152)
...|.|. +.+|+|.|+|.|.|.. .....+.|..+|................+.|.|.+.+.++...+.|. +.....
T Consensus 50 ~~~l~i~--~~~d~G~Y~C~~~n~~-~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~-~~~~~~ 125 (184)
T 3b5h_A 50 KTEFKVD--SDDQWGEYSCVFLPEP-MGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWY-KITDSE 125 (184)
T ss_dssp EEEEEEC--GGGCCEEEEEEEESTT-SCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEE-ECCSSS
T ss_pred cEEEEEe--chhhCeEEEEEEECCc-CcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEE-EcCCCC
Confidence 4466666 6899999999999943 35556777665532111100011236789999998876634455543 311111
Q ss_pred C-----CC-c----------ceE-----E-ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 97 E-----PS-P----------MSN-----Q-LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 97 ~-----~~-~----------~~~-----~-L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
. .. . ..+ . ..+.+.|.| .|.|.+|....+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C--~a~N~~g~~~~~ 176 (184)
T 3b5h_A 126 DKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRC--NGTSSKGSDQAI 176 (184)
T ss_dssp CEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEE--EEEETTEEEEEE
T ss_pred CEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEE--EEEeCCCcceEE
Confidence 0 00 0 012 2 245788988 779999976543
No 321
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.45 E-value=2.7e-07 Score=65.30 Aligned_cols=50 Identities=22% Similarity=0.385 Sum_probs=43.1
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCC-CCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVA-SDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~-~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..+.++.+...+....|.|.+++. +|+|.|+|.|.|.+|.....+.|.
T Consensus 143 ~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 193 (197)
T 3lcy_A 143 LLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVE 193 (197)
T ss_dssp ECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEE
T ss_pred ECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEE
Confidence 45667888888877778999999995 899999999999999998876664
No 322
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.44 E-value=9.2e-07 Score=70.86 Aligned_cols=109 Identities=10% Similarity=0.004 Sum_probs=64.4
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceE----------EEEEEecC-CCCceeecCCCCCCCCeEEEEEEecCCCC--
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR----------AYLELSGK-PNPAIFRSHPQGRLPNSYNITWMVSSYTP-- 82 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~----------~~~~v~~~-P~p~~~~~~~~~~~~~~~~L~W~~~~~~p-- 82 (152)
..+.|.|.++..+|+|.|+|+|.|..|... ..+.+... +.+|.+...........+.|.|.+.+..|
T Consensus 140 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~ 219 (450)
T 1z7z_I 140 AEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVS 219 (450)
T ss_dssp EEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGG
T ss_pred cceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCC
Confidence 456899999999999999999999988532 22334333 33444422111224688999999987645
Q ss_pred cceEEEEEEECCCCC-C------Cc--c--eE--EecCCCeEEEEEEEEcCCCCCCC
Q psy15979 83 LEEFKIKYRKIPGNE-P------SP--M--SN--QLTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 83 i~~y~~~~r~~~~~~-~------~~--~--~~--~L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
...+.| ...+... . .. . .. ...+.+.|.|...|.|..|....
T Consensus 220 ~~~~~W--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~ 274 (450)
T 1z7z_I 220 EAQVHL--ALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQET 274 (450)
T ss_dssp GCEEEE--EETTEECCCEEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEE
T ss_pred ceEEEE--eCCCEeCCceEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEE
Confidence 333433 2221110 0 00 1 11 23447745555588999886543
No 323
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.44 E-value=1.4e-07 Score=60.62 Aligned_cols=35 Identities=34% Similarity=0.581 Sum_probs=31.6
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.+.|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 64 ~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 98 (100)
T 3caf_A 64 HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 98 (100)
T ss_dssp GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEE
Confidence 45899999999999999999999999988877664
No 324
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.44 E-value=4.4e-07 Score=71.82 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=38.1
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCCC
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYT 81 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~ 81 (152)
.|+.+ .+ ++|.|.+|+.+|+|.|+|+|+|..|.++..+.|.+.+.+ ..+..+.|.|.+.+.+
T Consensus 294 ~r~~~-~~---~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~---------~~g~~~~l~C~~~g~P 355 (361)
T 2xot_A 294 GSVSV-RN---GDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFT---------LHGHHDTLNAAADPWS 355 (361)
T ss_dssp SSEEE-ET---TEEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEESSC---------CC--------------
T ss_pred CceEe-ec---CeEEEeecCcccCEEEEEEEecCCCccEEEEEEEEEeee---------ccCCceEEEEEeCCCC
Confidence 47777 33 479999999999999999999999999998777764422 1234677888877654
No 325
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.43 E-value=2.1e-07 Score=59.75 Aligned_cols=34 Identities=32% Similarity=0.492 Sum_probs=30.7
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 62 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 95 (98)
T 1gl4_B 62 GILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 95 (98)
T ss_dssp TEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred CEEEEeCCChhhCEEEEEEecCCCCccccEEEEE
Confidence 4799999999999999999999999988876654
No 326
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.43 E-value=1.3e-06 Score=63.48 Aligned_cols=77 Identities=16% Similarity=0.221 Sum_probs=50.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc------eEEEEEEec-CCCCceee-cCCC--CCCCCeEEEEE
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK------HRAYLELSG-KPNPAIFR-SHPQ--GRLPNSYNITW 75 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~------~~~~~~v~~-~P~p~~~~-~~~~--~~~~~~~~L~W 75 (152)
.+|+.+...+...+|.|.+++.+|+|.|.|.+.|..|. ....+.|.. .+.+|.+. ..+. ......+.|.|
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C 142 (215)
T 3nl4_H 63 KGRFTISKTSTTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGC 142 (215)
T ss_dssp TTTEEEEECSSEEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEE
T ss_pred cCCEEEEeeCCEEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEE
Confidence 47888877777888999999999999999999998653 112345542 23333333 2221 12357899999
Q ss_pred EecCCCC
Q psy15979 76 MVSSYTP 82 (152)
Q Consensus 76 ~~~~~~p 82 (152)
.+.+..|
T Consensus 143 ~~~~~~p 149 (215)
T 3nl4_H 143 LVKGYLP 149 (215)
T ss_dssp EEEEEBS
T ss_pred EEeeeeC
Confidence 9876433
No 327
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.43 E-value=1.5e-06 Score=63.26 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=49.9
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCce-----EEEEEEecC-CCCceee-cCC--CCCCCCeEEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSGK-PNPAIFR-SHP--QGRLPNSYNIT 74 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~~~v~~~-P~p~~~~-~~~--~~~~~~~~~L~ 74 (152)
.+|+.+..+ +...+|.|.+++.+|+|.|.|.+.|..|.. ...+.|... +.+|.+. ..+ .......+.|.
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 146 (220)
T 1pz5_B 67 KGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLG 146 (220)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEE
T ss_pred CCcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEE
Confidence 368887642 345689999999999999999999986532 234555532 3334332 221 12246789999
Q ss_pred EEecCC
Q psy15979 75 WMVSSY 80 (152)
Q Consensus 75 W~~~~~ 80 (152)
|.+.+.
T Consensus 147 C~~~g~ 152 (220)
T 1pz5_B 147 CLVKGY 152 (220)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998765
No 328
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.42 E-value=2e-06 Score=56.89 Aligned_cols=76 Identities=16% Similarity=0.219 Sum_probs=51.4
Q ss_pred cCCCCceeecCC-CCCCCCeEEEEEEecC-----CCCcceEEEEEEECCCCCCC------cceEE---ecCCCeEEEEEE
Q psy15979 52 GKPNPAIFRSHP-QGRLPNSYNITWMVSS-----YTPLEEFKIKYRKIPGNEPS------PMSNQ---LTGTNQYQNRRL 116 (152)
Q Consensus 52 ~~P~p~~~~~~~-~~~~~~~~~L~W~~~~-----~~pi~~y~~~~r~~~~~~~~------~~~~~---L~~~~~Y~~rV~ 116 (152)
.+|.||...... ......++.|+|..+. ...++.|.|+|+......+. ..++. |.+++.|+|||+
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~~~~~~~l~~L~p~t~Y~~~VR 85 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTAHTITDAYAGKEYIIQVA 85 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEESSCSEEEETTCCSSSCEEEEEE
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecccCCEEEEeCCCCCCEEEEEEE
Confidence 467777654321 1223578999999764 24578999999987654321 23444 445999999999
Q ss_pred EEcCCCCCCCCC
Q psy15979 117 VRKRFDRGNSTN 128 (152)
Q Consensus 117 A~N~~G~g~~s~ 128 (152)
|+|. |.|..|+
T Consensus 86 a~~~-g~g~wS~ 96 (109)
T 1uc6_A 86 AKDN-EIGTWSD 96 (109)
T ss_dssp CCBS-SSCCCCC
T ss_pred EEeC-CCCCcCc
Confidence 9996 8766554
No 329
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.42 E-value=6.5e-07 Score=66.72 Aligned_cols=77 Identities=21% Similarity=0.283 Sum_probs=52.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceE---EEEEEecCCCCceeec-CCC--CCCCCeEEEEEEecC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSS 79 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~~~v~~~P~p~~~~~-~~~--~~~~~~~~L~W~~~~ 79 (152)
.+|+.+...+...+|.|.+++.+|+|.|+|.|.|..+... ..+.|...+.+|.+.. .+. ......+.|.|.+.+
T Consensus 97 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g 176 (252)
T 3bkj_L 97 PDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNN 176 (252)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEE
T ss_pred CCceEEEccCCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEee
Confidence 4688887667778999999999999999999999876432 2455555444444332 111 112468999999876
Q ss_pred CCC
Q psy15979 80 YTP 82 (152)
Q Consensus 80 ~~p 82 (152)
..|
T Consensus 177 ~~p 179 (252)
T 3bkj_L 177 FYP 179 (252)
T ss_dssp EBS
T ss_pred EeC
Confidence 433
No 330
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.42 E-value=4.6e-07 Score=60.36 Aligned_cols=64 Identities=14% Similarity=0.254 Sum_probs=48.2
Q ss_pred CCCeEEEEEEecC--CCCcceEEEEEEECCCCC--------CCcceE---EecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 67 LPNSYNITWMVSS--YTPLEEFKIKYRKIPGNE--------PSPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 67 ~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~--------~~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
..+++.|+|..+. +..|..|.++|+...... .....+ .|.+++.|.|||.|.|..|.|.++...
T Consensus 30 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 30 LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred CCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 4689999999753 346889999999875322 111333 466699999999999999999887654
No 331
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=98.42 E-value=2.3e-06 Score=71.08 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=75.6
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe----cCCCCceeecCCCCCCCCeEEEEEEecC--CCCcceEEEEEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS----GKPNPAIFRSHPQGRLPNSYNITWMVSS--YTPLEEFKIKYR 91 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~----~~P~p~~~~~~~~~~~~~~~~L~W~~~~--~~pi~~y~~~~r 91 (152)
..+.|........-.+.|.|.|.+|...+.+.+. .+|.||...... .....++.|+|..+. ...+..|.++|+
T Consensus 347 ~~ct~~l~~~~t~Y~f~V~A~N~~G~~~S~~~~~~~~~v~P~PP~nl~v~-~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr 425 (488)
T 2q7n_A 347 YRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVINVTERVAPHDPTSLKVK-DINSTVVTFSWYLPGNFTKINLLCQIEIC 425 (488)
T ss_dssp EEEEEECCSSCCCCEEEEEEEETTEEEEEEEECCGGGTBCCCCCEEEEEE-ECSTTCEEEEEEEEEECSSSEEEEEEEEB
T ss_pred EEEEEcCCCCccEEEEEEEEEeCCCCccceEEEEecCCCCCCCCeEEEEE-ecCCCEEEEEEeCCCCCCCcceEEEEEEE
Confidence 3455543333355677899999999966543332 467777643211 124678999999863 346789999999
Q ss_pred ECCCCCCC---------cceE--E---ecCCCeEEEEEEEEcCCCC---CCCCCCccccc
Q psy15979 92 KIPGNEPS---------PMSN--Q---LTGTNQYQNRRLVRKRFDR---GNSTNGGLIVP 134 (152)
Q Consensus 92 ~~~~~~~~---------~~~~--~---L~~~~~Y~~rV~A~N~~G~---g~~s~~~~~~~ 134 (152)
..+...+. ...+ . |.+++.|+|||+|+| .|. |+.|....+.+
T Consensus 426 ~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T 484 (488)
T 2q7n_A 426 KANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLT 484 (488)
T ss_dssp CTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCC
T ss_pred ECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEEC
Confidence 87543210 1123 4 455999999999999 776 67777665543
No 332
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.41 E-value=1.2e-06 Score=63.32 Aligned_cols=74 Identities=18% Similarity=0.286 Sum_probs=49.0
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCC--CceEEEEEEec-CCCCceee-cCC--CCCCCCeEEEEEEe
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM--GKHRAYLELSG-KPNPAIFR-SHP--QGRLPNSYNITWMV 77 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~--G~~~~~~~v~~-~P~p~~~~-~~~--~~~~~~~~~L~W~~ 77 (152)
.+|+.+..+ +...+|.|.+++.+|+|.|.|.|.|.. |.. ..+.|.. .|.+|.+. ..+ .......+.|.|.+
T Consensus 64 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~-~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 142 (210)
T 3d9a_H 64 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGDYWGQG-TLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 142 (210)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSSCBCCC-EEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEE
T ss_pred CceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCcccccc-eEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEE
Confidence 468888642 345689999999999999999999964 322 3455543 33444332 221 11245789999998
Q ss_pred cCC
Q psy15979 78 SSY 80 (152)
Q Consensus 78 ~~~ 80 (152)
.+.
T Consensus 143 ~g~ 145 (210)
T 3d9a_H 143 KGY 145 (210)
T ss_dssp EEE
T ss_pred eeE
Confidence 765
No 333
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.41 E-value=2.5e-06 Score=65.32 Aligned_cols=116 Identities=20% Similarity=0.217 Sum_probs=66.0
Q ss_pred CCcEEEE-EcCCEeEEEEceeCCCCCEEEEEE-EEcCCCceEEEEEEe--cCCCCceeecCC-C----CCCCCeEEEEEE
Q psy15979 6 TERRIME-TRGSRHTLMIRKVVASDFGNYSCE-ATNPMGKHRAYLELS--GKPNPAIFRSHP-Q----GRLPNSYNITWM 76 (152)
Q Consensus 6 ~~r~~i~-~~~~~~~L~I~~v~~~D~G~YtC~-A~N~~G~~~~~~~v~--~~P~p~~~~~~~-~----~~~~~~~~L~W~ 76 (152)
.+|+.+. ......+|.|.+++.+|+|.|+|. +.|..|.....+.|. .+|......... . ....+.+.|.|.
T Consensus 79 ~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~ 158 (331)
T 3u83_A 79 RERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCT 158 (331)
T ss_dssp TTTEEESSCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEE
T ss_pred CCceEecccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEE
Confidence 4666664 233467799999999999999997 777788777765554 444321111111 0 111267999997
Q ss_pred -ecCCCCcceEEEEEEECCCCC--------CCc----ceEE-----ecCCCeEEEEEEEEcCCCCCC
Q psy15979 77 -VSSYTPLEEFKIKYRKIPGNE--------PSP----MSNQ-----LTGTNQYQNRRLVRKRFDRGN 125 (152)
Q Consensus 77 -~~~~~pi~~y~~~~r~~~~~~--------~~~----~~~~-----L~~~~~Y~~rV~A~N~~G~g~ 125 (152)
..+.+ ...+.| ++...... ... ..+. ..+.+.|.| .|.|..|...
T Consensus 159 ~~~~~p-~~~i~W-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~~~~~ 221 (331)
T 3u83_A 159 SANGKP-PSVVSW-ETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLAC--IVNYHMDRFK 221 (331)
T ss_dssp EEEEBS-CCEEEE-EESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEE--EEEETTEEEE
T ss_pred ecCCcC-CceEEE-EcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEE--EEecCCCcce
Confidence 44443 334444 33211100 111 1122 234899998 5688887643
No 334
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.41 E-value=4.9e-07 Score=70.01 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=58.9
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCc--eeecC--CCCCCCCeEEEEEEec----CCCCcceEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPA--IFRSH--PQGRLPNSYNITWMVS----SYTPLEEFK 87 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~--~~~~~--~~~~~~~~~~L~W~~~----~~~pi~~y~ 87 (152)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|. .+|... ..... ........+.|.|... ...|...+.
T Consensus 79 ~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~ 158 (349)
T 4dep_C 79 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTIT 158 (349)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEE
T ss_pred CEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEE
Confidence 4799999999999999999999999888765554 333211 00000 0112357789999741 113334444
Q ss_pred EEEEE---CCCCC---CCcceEE-----ecCCCeEEEEEEEEcCCC
Q psy15979 88 IKYRK---IPGNE---PSPMSNQ-----LTGTNQYQNRRLVRKRFD 122 (152)
Q Consensus 88 ~~~r~---~~~~~---~~~~~~~-----L~~~~~Y~~rV~A~N~~G 122 (152)
| |+. ..... .....+. ..+.+.|.| .|.|.+|
T Consensus 159 W-~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~~ 201 (349)
T 4dep_C 159 W-YMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTC--VVTYPEN 201 (349)
T ss_dssp E-EETTEECCSCSSEEEETTEEEEESCCGGGCEEEEE--EEEEEET
T ss_pred E-eeCCEECCCccceeecCCEEEEeeeeecCCcEEEE--EEEEeeC
Confidence 4 332 11100 0012233 334889998 5688773
No 335
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=98.40 E-value=3.2e-06 Score=72.31 Aligned_cols=114 Identities=11% Similarity=0.142 Sum_probs=74.7
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCce-EE----EEEEe---cCCCCceeec-CCCCCCCC---eEEEEEEec--CCC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKH-RA----YLELS---GKPNPAIFRS-HPQGRLPN---SYNITWMVS--SYT 81 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~~----~~~v~---~~P~p~~~~~-~~~~~~~~---~~~L~W~~~--~~~ 81 (152)
....+.|.++.+.-.-.|.+.|.|..|.. .. .+... .+|.+|.... .......+ ++.|.|..+ .+.
T Consensus 221 ~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g 300 (680)
T 1zlg_A 221 TDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDI 300 (680)
T ss_pred CCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCC
Confidence 34568899998888888899999999932 11 12221 2344443221 11111345 999999964 346
Q ss_pred CcceEEEEEEEC-CC---C---C------CCc-ceEE---ecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 82 PLEEFKIKYRKI-PG---N---E------PSP-MSNQ---LTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 82 pi~~y~~~~r~~-~~---~---~------~~~-~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
+|..|.|+|+.. .. . . ... ..+. |.+++.|+|+|.|.|..|.|.++..
T Consensus 301 ~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 365 (680)
T 1zlg_A 301 PVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSA 365 (680)
T ss_pred ceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCC
Confidence 899999999832 11 0 1 111 2343 5569999999999999999987765
No 336
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.40 E-value=3.8e-07 Score=67.41 Aligned_cols=102 Identities=9% Similarity=0.004 Sum_probs=63.9
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCC-CCCCCeEEEEEEecCCCCcceEEEEEEECCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~-~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~ 95 (152)
...|.|.+++.+|+|.|+|.|.|..++....+.|...| ........ ......+.|.|.+....|...+.|. +. +.
T Consensus 47 ~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~--~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~-~~-g~ 122 (262)
T 3rjd_A 47 TPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGW--LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYY-RN-GK 122 (262)
T ss_dssp SSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSS--EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEE-ET-TE
T ss_pred CCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccc--eEecCCCeEEecCCeEEEEEEccCCCCCceEEEE-EC-Cc
Confidence 46799999999999999999999999887777776443 22111111 1246789999998554454445543 21 11
Q ss_pred CC---CCcceEE-----ecCCCeEEEEEEEEcCCCCC
Q psy15979 96 NE---PSPMSNQ-----LTGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 96 ~~---~~~~~~~-----L~~~~~Y~~rV~A~N~~G~g 124 (152)
.. .....+. ..+.+.|.| .|.|..|..
T Consensus 123 ~~~~~~~~~~l~i~~~~~~d~G~Y~C--~~~n~~~~~ 157 (262)
T 3rjd_A 123 AFKFFHWNSNLTILKTNISHNGTYHC--SGMGKHRYT 157 (262)
T ss_dssp EEEEEEECCCEEESSCCGGGCEEEEE--EEESSSEEE
T ss_pred cccccCCCCeEEEEECChhhCEEEEE--EEeCCCCcc
Confidence 00 0012223 334788988 568887543
No 337
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.40 E-value=2.5e-07 Score=70.88 Aligned_cols=41 Identities=29% Similarity=0.380 Sum_probs=34.4
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCce
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAI 58 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~ 58 (152)
+.|.|.+++.+|+|.|+|.|.|.+|.+++++.|.+.-.||+
T Consensus 268 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 268 AQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPPH 308 (313)
T ss_dssp TEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC--
T ss_pred CEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCCC
Confidence 47999999999999999999999999999877776544543
No 338
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=98.40 E-value=9e-07 Score=73.45 Aligned_cols=104 Identities=24% Similarity=0.212 Sum_probs=69.2
Q ss_pred eeCCCCCEEEEEEEEcCCCceEE-EEEE--e--cCCCCceeecC-CCCCCCCeEEEEEEecC--CCCcceEEEEEEECCC
Q psy15979 24 KVVASDFGNYSCEATNPMGKHRA-YLEL--S--GKPNPAIFRSH-PQGRLPNSYNITWMVSS--YTPLEEFKIKYRKIPG 95 (152)
Q Consensus 24 ~v~~~D~G~YtC~A~N~~G~~~~-~~~v--~--~~P~p~~~~~~-~~~~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~ 95 (152)
++.....-.|.|.|.|.+|.... .+.+ . .+|.||..... .......++.|+|..+. ..++..|.++|+....
T Consensus 164 ~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~ 243 (589)
T 3l5h_A 164 STVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDA 243 (589)
T ss_dssp CCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTC
T ss_pred CCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCC
Confidence 34444455677999999998643 2222 2 25666643321 12335689999999753 3578899999998764
Q ss_pred CCCC----------cceEE---ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 96 NEPS----------PMSNQ---LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 96 ~~~~----------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
..+. ...+. |.+++.|+|||.|.|..|.|.++
T Consensus 244 ~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S 288 (589)
T 3l5h_A 244 STWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWS 288 (589)
T ss_dssp SCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCC
T ss_pred CCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccC
Confidence 3311 13343 66699999999999999987764
No 339
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=98.40 E-value=2e-06 Score=62.35 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=54.1
Q ss_pred EEcCCCceEEEEEEe---cCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCCC--------CcceEE-
Q psy15979 37 ATNPMGKHRAYLELS---GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNEP--------SPMSNQ- 104 (152)
Q Consensus 37 A~N~~G~~~~~~~v~---~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~~--------~~~~~~- 104 (152)
+.|..|.....+... +.|.|..+... ....+++.|+|..+...++..|.++|+....... ....+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~P~P~~l~~~--~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i 81 (203)
T 2gee_A 4 SHHHHHHSSGLVPRGSHMEVPQPTDLSFV--DITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTV 81 (203)
T ss_dssp ------------CCCSSSCCCCCEEEEEE--CCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEE
T ss_pred cccccccccceeccCccccCcCCCccEEE--ecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeEEcCCCccEEEe
Confidence 445566555543322 45645444332 2356899999998776688999999998764421 123343
Q ss_pred --ecCCCeEEEEEEEEcCCCCCCCC
Q psy15979 105 --LTGTNQYQNRRLVRKRFDRGNST 127 (152)
Q Consensus 105 --L~~~~~Y~~rV~A~N~~G~g~~s 127 (152)
|.+++.|.|+|.|.|..|.|.+.
T Consensus 82 ~~L~p~t~Y~~~V~a~~~~g~s~~~ 106 (203)
T 2gee_A 82 TGLEPGIDYDISVYTVKNGGESTPT 106 (203)
T ss_dssp CSCCTTCEEEEEEEEESSSCBCCCE
T ss_pred CCCCCCCEEEEEEEEEeCCCccccE
Confidence 56699999999999999988765
No 340
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.39 E-value=2e-06 Score=63.16 Aligned_cols=77 Identities=16% Similarity=0.212 Sum_probs=51.1
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCC-----c-----eEEEEEEec-CCCCc-eeecCCC--CCCCC
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-----K-----HRAYLELSG-KPNPA-IFRSHPQ--GRLPN 69 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----~-----~~~~~~v~~-~P~p~-~~~~~~~--~~~~~ 69 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..| . ....+.|.. .|.+| ++...+. .....
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~ 144 (225)
T 1op3_H 65 KGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGG 144 (225)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCC
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCC
Confidence 468888643 4567899999999999999999999875 2 122455554 23333 3332221 12467
Q ss_pred eEEEEEEecCCCC
Q psy15979 70 SYNITWMVSSYTP 82 (152)
Q Consensus 70 ~~~L~W~~~~~~p 82 (152)
.+.|.|.+.+..|
T Consensus 145 ~v~L~C~~~g~~P 157 (225)
T 1op3_H 145 TAALGCLVKDYFP 157 (225)
T ss_dssp EEEEEEEEEEEBS
T ss_pred cEEEEEEEEeEEC
Confidence 8999999876533
No 341
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.38 E-value=2.5e-07 Score=59.98 Aligned_cols=49 Identities=24% Similarity=0.527 Sum_probs=37.9
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE--EEEecCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSGKP 54 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--~~v~~~P 54 (152)
+|..++|+.+..++....|.|.+++.+|+|.|+|+ +|..... +.|...|
T Consensus 47 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~~~p 97 (103)
T 2e7b_A 47 VLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS----FGDQTTSATLTVTALP 97 (103)
T ss_dssp BCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----CSSCBCCBCEEEECCC
T ss_pred ECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----ECCcEEEEEEEEEecc
Confidence 46677899999888888999999999999999998 4544443 4444443
No 342
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.38 E-value=1.9e-06 Score=62.81 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=49.7
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCC-----c--eEEEEEEecC-CCCcee-ecCC--CCCCCCeEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-----K--HRAYLELSGK-PNPAIF-RSHP--QGRLPNSYN 72 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----~--~~~~~~v~~~-P~p~~~-~~~~--~~~~~~~~~ 72 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..| . ....+.|... +.+|.+ ...+ .......+.
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~ 146 (222)
T 1q9r_B 67 KGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVT 146 (222)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEE
T ss_pred CCceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEE
Confidence 368888653 3567899999999999999999999765 1 1234555542 233333 2221 112457899
Q ss_pred EEEEecCC
Q psy15979 73 ITWMVSSY 80 (152)
Q Consensus 73 L~W~~~~~ 80 (152)
|.|.+.+.
T Consensus 147 L~C~~~g~ 154 (222)
T 1q9r_B 147 LGCLVKGY 154 (222)
T ss_dssp EEEEEEEE
T ss_pred EEEEEccE
Confidence 99998764
No 343
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=98.38 E-value=4.4e-06 Score=61.17 Aligned_cols=112 Identities=13% Similarity=0.040 Sum_probs=60.8
Q ss_pred EEEceeCCCCCEEEEEEEEcCCCceEEE-EEE--e--cCCCCceeecCCCCCCCCeEEEEEEecCCCC-cceEEEEEEEC
Q psy15979 20 LMIRKVVASDFGNYSCEATNPMGKHRAY-LEL--S--GKPNPAIFRSHPQGRLPNSYNITWMVSSYTP-LEEFKIKYRKI 93 (152)
Q Consensus 20 L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v--~--~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~p-i~~y~~~~r~~ 93 (152)
-.|..+.....-.....|.|.+|...+. +.+ . .+|.||............++.|+|..+.... ++.|.++|+..
T Consensus 71 C~~~~~~~~~~Y~~~V~a~N~~G~~~s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~ 150 (206)
T 3v6o_A 71 CIFQPIFLLSGYTMWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLS 150 (206)
T ss_dssp EEECSCCTTSCEEEEEEEC---CCEECCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEES
T ss_pred EEeCcHHhcccEEEEEEEEcCCccccCCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEEC
Confidence 3344443333344555789999977642 233 2 5677775432111113679999999764433 47899999987
Q ss_pred CC-CCCC------c--ceE---EecCCCeEEEEEEEEcCCCCC---CCCCCcc
Q psy15979 94 PG-NEPS------P--MSN---QLTGTNQYQNRRLVRKRFDRG---NSTNGGL 131 (152)
Q Consensus 94 ~~-~~~~------~--~~~---~L~~~~~Y~~rV~A~N~~G~g---~~s~~~~ 131 (152)
.. ..+. . ..+ .|.+++.|+|||+|++..|.| +.|....
T Consensus 151 ~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeWS~~~~ 203 (206)
T 3v6o_A 151 GKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNWSNPAY 203 (206)
T ss_dssp SSSCCCEEEEECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCCCCCEE
T ss_pred CCCCceEEEecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCCCcceE
Confidence 52 2211 1 123 355699999999999976644 4444443
No 344
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=98.38 E-value=3e-06 Score=64.04 Aligned_cols=103 Identities=13% Similarity=0.134 Sum_probs=68.5
Q ss_pred EEceeCCCCCEEEEEEEEcCCCceEEE-EEEec----CCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCC
Q psy15979 21 MIRKVVASDFGNYSCEATNPMGKHRAY-LELSG----KPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (152)
Q Consensus 21 ~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v~~----~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~ 95 (152)
.+..+...-.-.+++.|.|..|..... +.+.. .|.|+..... ....+++.|+|..+.. ++..|.++|+....
T Consensus 64 ~~~~l~p~t~Y~~~V~A~n~~G~s~~s~~~~~~~~~~~~~p~~~~~~--~~~~~si~l~W~~p~~-~i~~Y~v~~~~~~~ 140 (290)
T 3l5i_A 64 KLTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKA--FPKDNMLWVEWTTPRE-SVKKYILEWCVLSD 140 (290)
T ss_dssp EEEEEECSSCEEEEEEEEESSCBCCCEEEEECCTTCCCCCCCEEEEE--EEETTEEEEEEECCSS-CCCEEEEEEEEECS
T ss_pred EEEEEcCCceEEEEEEEEcCCCCCCCceEEeecccccCCCccceeEE--EeCCCeEEEEEeCCCC-CCCcEEEEEEECCC
Confidence 345555566677788999999976553 33222 2333322211 1124699999998755 78999999987654
Q ss_pred CCC-----------CcceE---EecCCCeEEEEEEEEcCCCCCCC
Q psy15979 96 NEP-----------SPMSN---QLTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 96 ~~~-----------~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
... ....+ .|.+++.|+|+|.|.|..|.|.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~ 185 (290)
T 3l5i_A 141 KAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSP 185 (290)
T ss_dssp SSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECCC
T ss_pred CCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCccccc
Confidence 421 11223 46679999999999999999985
No 345
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.38 E-value=3.8e-07 Score=61.70 Aligned_cols=69 Identities=22% Similarity=0.265 Sum_probs=51.5
Q ss_pred CCCCeEEEEEEecC----CCCcceEEEEEEECCCCC--------CCcceE---EecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 66 RLPNSYNITWMVSS----YTPLEEFKIKYRKIPGNE--------PSPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 66 ~~~~~~~L~W~~~~----~~pi~~y~~~~r~~~~~~--------~~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
...+++.|+|..+. +.+|..|.|+|+...... .....+ .|.+++.|.|+|.|.|..|.|.++...
T Consensus 30 ~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 109 (132)
T 1x5h_A 30 RNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWL 109 (132)
T ss_dssp CSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEEEECCCSSCEEEEECEEEETTEEEEECCCE
T ss_pred CCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEEEeCCCccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCE
Confidence 35689999999863 357899999998764321 111334 466699999999999999999988766
Q ss_pred cccc
Q psy15979 131 LIVP 134 (152)
Q Consensus 131 ~~~~ 134 (152)
.+.+
T Consensus 110 ~~~T 113 (132)
T 1x5h_A 110 SAET 113 (132)
T ss_dssp EEEC
T ss_pred EeEc
Confidence 5544
No 346
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.37 E-value=4.8e-07 Score=69.79 Aligned_cols=103 Identities=13% Similarity=0.112 Sum_probs=61.2
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec--CCCCc--eeecCCCCCCCCeEEEEEE-----ecCCCCcceEEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPA--IFRSHPQGRLPNSYNITWM-----VSSYTPLEEFKI 88 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~--~P~p~--~~~~~~~~~~~~~~~L~W~-----~~~~~pi~~y~~ 88 (152)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|.. .|.+. .............+.|.|. ..+.+ ...+.|
T Consensus 81 ~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p-~~~v~W 159 (339)
T 3o4o_C 81 GALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKT-DVKIQW 159 (339)
T ss_dssp TEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSS-CCCBCC
T ss_pred CeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCC-CceEEE
Confidence 47999999999999999999999998877666553 33221 1000001124678899998 44433 223443
Q ss_pred EEEECCC-CC--------CCcceEEecC-----CCeEEEEEEEEcCCCCC
Q psy15979 89 KYRKIPG-NE--------PSPMSNQLTG-----TNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 89 ~~r~~~~-~~--------~~~~~~~L~~-----~~~Y~~rV~A~N~~G~g 124 (152)
++.... .. .....+.|.. .+.|.| .|.|..|..
T Consensus 160 -~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~g~~ 206 (339)
T 3o4o_C 160 -YKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRC--VLTFAHEGQ 206 (339)
T ss_dssp -EESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEE--EEECCBTTB
T ss_pred -ecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEE--EEEECCCCe
Confidence 332110 00 0112344433 788988 678988753
No 347
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.37 E-value=3.4e-07 Score=65.44 Aligned_cols=38 Identities=24% Similarity=0.483 Sum_probs=34.4
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P 54 (152)
.+.|.|.+++.+|+|.|+|.|.|.+|.....+.|.+.+
T Consensus 175 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 175 SPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212 (214)
T ss_dssp SSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred CCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeC
Confidence 45899999999999999999999999999988887653
No 348
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=98.37 E-value=1.5e-06 Score=74.39 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=66.7
Q ss_pred CCCCCEEEEEEEEcCCCceEEE--EEEecCCCCc-eeecCCCCCCCCeEEEEEEecC---CCCcceEEEEEEECCC----
Q psy15979 26 VASDFGNYSCEATNPMGKHRAY--LELSGKPNPA-IFRSHPQGRLPNSYNITWMVSS---YTPLEEFKIKYRKIPG---- 95 (152)
Q Consensus 26 ~~~D~G~YtC~A~N~~G~~~~~--~~v~~~P~p~-~~~~~~~~~~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~---- 95 (152)
..++.|.+.| +.|..|..-.. ..+.+.|.|| .... ......+++.|+|..+. ..++. |.|+|+....
T Consensus 131 d~~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~l~-v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~ 207 (680)
T 1zlg_A 131 DNECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKELR-FTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPS 207 (680)
T ss_pred cccCCCcccc-ccccccccccccceeeecccccccccce-EEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcC
Confidence 3567899999 78888874331 2234566665 2211 11245789999999852 45777 9999997632
Q ss_pred ----CCC------CcceE---EecCCCeEEEEEEEEcCCC-CCCCCCCccc
Q psy15979 96 ----NEP------SPMSN---QLTGTNQYQNRRLVRKRFD-RGNSTNGGLI 132 (152)
Q Consensus 96 ----~~~------~~~~~---~L~~~~~Y~~rV~A~N~~G-~g~~s~~~~~ 132 (152)
..+ ....+ .|.+++.|+|||.|.|.+| .|.++.+..+
T Consensus 208 ~~~~~~w~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~ 258 (680)
T 1zlg_A 208 EDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHF 258 (680)
T ss_pred ccccCceEEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccce
Confidence 111 11233 3666999999999999999 5555544433
No 349
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.36 E-value=2.6e-06 Score=63.35 Aligned_cols=67 Identities=16% Similarity=0.172 Sum_probs=47.1
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEE--ecCCCCceeecCCCCCCCCeEEEEEEecCCCCc
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPL 83 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v--~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi 83 (152)
.....|.|.+|+.+|+|.|.|+|.|..|+....+.| ...|..+..... .......+ |+|.+.+..|.
T Consensus 56 ~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~ 124 (210)
T 1gsm_A 56 TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPV 124 (210)
T ss_dssp SSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCC
T ss_pred CCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCC
Confidence 457889999999999999999999999988765555 455543332211 11223556 99998765453
No 350
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.35 E-value=5.1e-07 Score=63.53 Aligned_cols=48 Identities=35% Similarity=0.576 Sum_probs=38.7
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..+.++.+. +..+.|.|.+++.+|+|.|+|.|.|.+|.....+.|.
T Consensus 138 ~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 185 (189)
T 2v5t_A 138 LIEENEKYILK--GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ 185 (189)
T ss_dssp ECCCSSSEEEE--TTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ECcCCCcEEEe--cCCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEE
Confidence 34556677665 3356899999999999999999999999998876654
No 351
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.35 E-value=5.5e-06 Score=63.36 Aligned_cols=75 Identities=11% Similarity=0.158 Sum_probs=46.8
Q ss_pred CcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCC-CceE------EEEEEecC-----------C--CCceeecCCC
Q psy15979 7 ERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPM-GKHR------AYLELSGK-----------P--NPAIFRSHPQ 64 (152)
Q Consensus 7 ~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G~~~------~~~~v~~~-----------P--~p~~~~~~~~ 64 (152)
+|+.+.. .+...+|.|.+++.+|+|.|.|.+.|.. |... ..+.|... | .++.+...+.
T Consensus 88 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~ 167 (291)
T 2gki_A 88 GKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPS 167 (291)
T ss_dssp TTBCEEEEGGGTEEEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCS
T ss_pred CCEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCC
Confidence 6776654 2356789999999999999999999985 3211 13444441 1 1222222111
Q ss_pred ---CCCCCeEEEEEEecCCC
Q psy15979 65 ---GRLPNSYNITWMVSSYT 81 (152)
Q Consensus 65 ---~~~~~~~~L~W~~~~~~ 81 (152)
......+.|.|.+.+..
T Consensus 168 ~~~v~~G~~v~L~C~~~~~~ 187 (291)
T 2gki_A 168 SLAVSAGEKVTMSCKSSQSL 187 (291)
T ss_dssp EEEEETTSCEEEEEEESSCC
T ss_pred EEEEcCCCcEEEEEEcCCcc
Confidence 12468899999987653
No 352
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.35 E-value=1.1e-06 Score=56.25 Aligned_cols=63 Identities=11% Similarity=0.163 Sum_probs=47.0
Q ss_pred CCCeEEEEEEecCCCCcceEEEEEEECCCCC--------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 67 LPNSYNITWMVSSYTPLEEFKIKYRKIPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 67 ~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
..+++.|+|..+. .++..|.+.|+...... ....++. |.+++.|+|+|.|.|..|.|.+....
T Consensus 14 ~~~si~lsW~~p~-~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~ 87 (94)
T 1j8k_A 14 DVDSIKIAWESPQ-GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGT 87 (94)
T ss_dssp ETTEEEEECCCCS-SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSSCCCCCEEEE
T ss_pred cCCEEEEEEcCCC-CCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeE
Confidence 4689999998765 57899999998754211 1123444 56699999999999999999886543
No 353
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.35 E-value=6.1e-07 Score=65.66 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceE-----EEEEEecCC-CCceeec-CCC--CCCCCeEEEEEE
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR-----AYLELSGKP-NPAIFRS-HPQ--GRLPNSYNITWM 76 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-----~~~~v~~~P-~p~~~~~-~~~--~~~~~~~~L~W~ 76 (152)
.+|+.+...+...+|.|.+++.+|+|.|+|.|.|..|... ..+.|...| .+|.+.. .+. ......+.|.|.
T Consensus 79 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~ 158 (234)
T 2j6e_L 79 PDRFSGSKSGTSASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCL 158 (234)
T ss_dssp CTTEEEEEETTEEEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEEC
T ss_pred cccEEEEecCCeEEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEE
Confidence 3688887666778999999999999999999999988311 123332222 2333221 111 112457889998
Q ss_pred ecCCCCc-ceEEE
Q psy15979 77 VSSYTPL-EEFKI 88 (152)
Q Consensus 77 ~~~~~pi-~~y~~ 88 (152)
+.+..|. ..+.|
T Consensus 159 ~~g~~p~~~~v~W 171 (234)
T 2j6e_L 159 ISDFFPGAVTVAW 171 (234)
T ss_dssp CCBCSSCCCEEEE
T ss_pred EEEEcCCceEEEE
Confidence 8764333 24444
No 354
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.34 E-value=1.3e-06 Score=58.25 Aligned_cols=64 Identities=14% Similarity=0.233 Sum_probs=49.0
Q ss_pred CCCCeEEEEEEecCCCCcceEEEEEEECCCCCC-------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCc
Q psy15979 66 RLPNSYNITWMVSSYTPLEEFKIKYRKIPGNEP-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGG 130 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~ 130 (152)
.+.+++.|+|.... .++..|+|.|+....... ...++. |.+++.|.|+|.|.|..|.|.++...
T Consensus 19 vt~tsi~vsW~pp~-~~i~~Y~I~y~~~~~~~~~~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~ 92 (108)
T 2ee3_A 19 VSHDAARVFWEGAP-RPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGR 92 (108)
T ss_dssp CCSSCEEEEESCCS-SCCSEEEEEEEETTTCCBCCEEEETTCCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEE
T ss_pred ccCCeEEEEeeCCC-CCccEEEEEEEeCCCCceeEEEcCCCcCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCE
Confidence 45789999999764 579999999998754321 113444 55599999999999999999988654
No 355
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.34 E-value=6.8e-07 Score=64.73 Aligned_cols=40 Identities=33% Similarity=0.365 Sum_probs=35.4
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (152)
.|+.+...+..+.|.|.+++.+|+|.|+|.|+|.+|.+.+
T Consensus 156 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s 195 (212)
T 2yd6_A 156 GRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYS 195 (212)
T ss_dssp CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred ceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccc
Confidence 5677766667889999999999999999999999998876
No 356
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.33 E-value=4.6e-06 Score=65.08 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=32.1
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNP 56 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p 56 (152)
...|.|.+++.+|+|.|+|.|.|..+..+..+.|. ..|.+
T Consensus 141 ~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~ 182 (363)
T 1wio_A 141 GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 182 (363)
T ss_dssp SSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCS
T ss_pred ceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCC
Confidence 46899999999999999999999988877754443 44443
No 357
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=98.33 E-value=3.4e-06 Score=60.71 Aligned_cols=59 Identities=15% Similarity=0.277 Sum_probs=46.6
Q ss_pred CCeEEEEEEecCCCCcceEEEEEEECCC-CCC-------CcceEE---ecCCCeEEEEEEEEcCCCCCCC
Q psy15979 68 PNSYNITWMVSSYTPLEEFKIKYRKIPG-NEP-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 68 ~~~~~L~W~~~~~~pi~~y~~~~r~~~~-~~~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
.+++.|+|..+...++..|.|+|+.... ..+ ....+. |.+++.|+|+|.|.|..|.|.+
T Consensus 15 ~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~ 84 (201)
T 2ha1_A 15 PNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEV 84 (201)
T ss_dssp SSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECTTSCEEE
T ss_pred CCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEecccccCc
Confidence 7899999999876789999999997643 221 123443 6669999999999999999875
No 358
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=98.33 E-value=6.6e-06 Score=63.52 Aligned_cols=113 Identities=9% Similarity=0.032 Sum_probs=69.9
Q ss_pred eEEEEceeCC----CCCEEEEEEEEcCCCceEEE-EEE--e--cCCCCceeecCCCCCCCCeEEEEEEecCC--CCcceE
Q psy15979 18 HTLMIRKVVA----SDFGNYSCEATNPMGKHRAY-LEL--S--GKPNPAIFRSHPQGRLPNSYNITWMVSSY--TPLEEF 86 (152)
Q Consensus 18 ~~L~I~~v~~----~D~G~YtC~A~N~~G~~~~~-~~v--~--~~P~p~~~~~~~~~~~~~~~~L~W~~~~~--~pi~~y 86 (152)
..+.|..+.. ...-.+...|.|..|..... +.+ . ++|.||...... ....++.|+|..+.. ..++.|
T Consensus 155 ~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~~~~~~~~~v~P~pP~~l~~~--~~~~~l~lsW~~P~~~~~~~l~Y 232 (314)
T 3bpo_C 155 FGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLS--FHNDDLYVQWENPQNFISRCLFY 232 (314)
T ss_dssp EEEEEECCC--------CCEEEEEEETTSCSCCEEEEECSSSSEECCCCEEEEEE--EETTEEEEEEECCTTCCGGGEEE
T ss_pred EEEEECCCCccccceeEEEEEEEEEcCCCceecccEEEehhheEeeCCCCEEEEE--EcCCcEEEEEeCCCccCCceEEE
Confidence 4455555542 23344567799998876443 222 2 457777644321 345799999998752 235789
Q ss_pred EEEEEECCCCCC--------------------CcceE---EecCCCeEEEEEEEEcC------CC-CCCCCCCccc
Q psy15979 87 KIKYRKIPGNEP--------------------SPMSN---QLTGTNQYQNRRLVRKR------FD-RGNSTNGGLI 132 (152)
Q Consensus 87 ~~~~r~~~~~~~--------------------~~~~~---~L~~~~~Y~~rV~A~N~------~G-~g~~s~~~~~ 132 (152)
.|+|+......+ ....+ .|.+++.|.|||+|++. .| ||+.|....+
T Consensus 233 ev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~ 308 (314)
T 3bpo_C 233 EVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSI 308 (314)
T ss_dssp EEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEE
T ss_pred EEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEe
Confidence 999987654321 11233 35669999999999985 56 7888876655
No 359
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.33 E-value=4.1e-07 Score=71.37 Aligned_cols=105 Identities=16% Similarity=0.080 Sum_probs=59.5
Q ss_pred EeEEEEc----eeCCCCCEEEEEEEEcCCCceEE-EE--EEecCCCCceeecCC-CCCCCCeEEEEEEecCCCCcceEEE
Q psy15979 17 RHTLMIR----KVVASDFGNYSCEATNPMGKHRA-YL--ELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 17 ~~~L~I~----~v~~~D~G~YtC~A~N~~G~~~~-~~--~v~~~P~p~~~~~~~-~~~~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
.+.|.|. +++.+|+|.|+|.|.|..|...+ .+ .|...|..+.....+ .......+.|.|.+....|...+.|
T Consensus 72 ~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W 151 (404)
T 3p3y_A 72 SGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 151 (404)
T ss_dssp SCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEE
T ss_pred CceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEE
Confidence 4556664 88999999999999999998753 44 444444322111111 1124678899998844444444444
Q ss_pred EEEECCCCCC--------CcceEE-----ecC-CCeEEEEEEEEcCCCCC
Q psy15979 89 KYRKIPGNEP--------SPMSNQ-----LTG-TNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 89 ~~r~~~~~~~--------~~~~~~-----L~~-~~~Y~~rV~A~N~~G~g 124 (152)
++....... ....+. ..+ ++.|.| .|.|..|..
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C--~a~n~~~~~ 198 (404)
T 3p3y_A 152 -MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSC--NARFHFTHT 198 (404)
T ss_dssp -ECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEE--EEECTTTCC
T ss_pred -eCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEE--EEEeccccc
Confidence 332111000 011222 333 578998 668888864
No 360
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.33 E-value=2e-06 Score=67.29 Aligned_cols=65 Identities=18% Similarity=0.129 Sum_probs=41.8
Q ss_pred EeEEEEceeCCCC------CEEEEEEEEcCCCceEE---EEEEecCCCCceeecCCCCCCCCeEEEEEEecCCC
Q psy15979 17 RHTLMIRKVVASD------FGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYT 81 (152)
Q Consensus 17 ~~~L~I~~v~~~D------~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~ 81 (152)
++.|.|.+++.+| +|.|+|.|.|..|...+ .+.+...|................+.|.|.+.+..
T Consensus 58 ~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~ 131 (388)
T 2v5m_A 58 DGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFV 131 (388)
T ss_dssp TTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTT
T ss_pred CceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCC
Confidence 3579999999987 99999999999997543 34443433221111000112357888988887653
No 361
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.32 E-value=1e-05 Score=65.61 Aligned_cols=77 Identities=14% Similarity=0.222 Sum_probs=50.5
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCc--------eEEEEEEec-CCCCce-eecCC-CCCCCCeEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK--------HRAYLELSG-KPNPAI-FRSHP-QGRLPNSYN 72 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~--------~~~~~~v~~-~P~p~~-~~~~~-~~~~~~~~~ 72 (152)
.+|+.+..+ +...+|.|.+++.+|+|.|.|.+.|..|. ....+.|.. .+.+|. +...+ .......+.
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~ 145 (475)
T 1iga_A 66 RGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVV 145 (475)
T ss_pred CCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEE
Confidence 467877643 35678999999999999999999998762 112344443 233333 32211 113467899
Q ss_pred EEEEecCCCC
Q psy15979 73 ITWMVSSYTP 82 (152)
Q Consensus 73 L~W~~~~~~p 82 (152)
|.|.+.+..|
T Consensus 146 L~C~~~g~~P 155 (475)
T 1iga_A 146 IACLVQGFFP 155 (475)
T ss_pred EEEEEeeecC
Confidence 9999877544
No 362
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.32 E-value=3.4e-07 Score=62.26 Aligned_cols=45 Identities=27% Similarity=0.383 Sum_probs=36.5
Q ss_pred CcEEEEEc---CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 7 ERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 7 ~r~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.|..+..+ ..+.+|.|.+|+.+|+|.|+|.+.|..|..++.++|.
T Consensus 70 ~R~~~~~~~~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~Lk 117 (125)
T 4gos_A 70 GRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 117 (125)
T ss_dssp TCEEECTTTGGGTBCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ceEEEecCCccCCeEEEEECCCChHHCEEEEEEEEeCCCeEEEEEEEE
Confidence 45555422 1245799999999999999999999999999988875
No 363
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.31 E-value=8.6e-07 Score=58.54 Aligned_cols=51 Identities=22% Similarity=0.212 Sum_probs=39.7
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCC
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNP 56 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p 56 (152)
++|+.+.. .....+|+|.+++.+|+|.|.|.+.|........+.|.+.|.|
T Consensus 60 ~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 60 KNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDPMFKVTVNIGPVP 112 (113)
T ss_dssp ETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCSSSCCEEEEEEEEECC-
T ss_pred CCCEEEEECCcCCEEEEEEccCCHHHCEEEEEeeEcCCCCccEEEEEEEEcCC
Confidence 46787763 3456789999999999999999999986556667777776655
No 364
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.31 E-value=4.2e-06 Score=61.36 Aligned_cols=77 Identities=10% Similarity=0.183 Sum_probs=50.2
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCC----c----eEEEEEEec-CCCCceee-cCC--CCCCCCeE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG----K----HRAYLELSG-KPNPAIFR-SHP--QGRLPNSY 71 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G----~----~~~~~~v~~-~P~p~~~~-~~~--~~~~~~~~ 71 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..| . ....+.|.. .+.+|.+. ..+ .......+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v 144 (223)
T 1dee_B 65 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTV 144 (223)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEE
T ss_pred CCeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcE
Confidence 468888643 3467899999999999999999999764 1 112455553 33343332 221 11245789
Q ss_pred EEEEEecCCCC
Q psy15979 72 NITWMVSSYTP 82 (152)
Q Consensus 72 ~L~W~~~~~~p 82 (152)
.|.|.+.+..|
T Consensus 145 ~L~C~~~g~~P 155 (223)
T 1dee_B 145 AVGCLAQDFLP 155 (223)
T ss_dssp EEEEEEEEEBS
T ss_pred EEEEEEEEEeC
Confidence 99999876533
No 365
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.31 E-value=1.1e-06 Score=60.10 Aligned_cols=48 Identities=25% Similarity=0.279 Sum_probs=38.2
Q ss_pred CCcEEEEEc---CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 6 TERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 6 ~~r~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
.+|+.+..+ ....+|.|.+|+.+|+|.|+|.+.|..|..+..+.|.+.
T Consensus 70 ~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 70 RGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp TTSEEEECTTGGGTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCceEEccccccCCeEEEEEccCCHHHCEEEEEEEEcCCCceEEEEEEEEe
Confidence 367777642 246789999999999999999999999987776666543
No 366
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.31 E-value=5.8e-07 Score=64.40 Aligned_cols=48 Identities=31% Similarity=0.558 Sum_probs=38.6
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE-EEEEe
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~~~v~ 51 (152)
+|..++++.+... .++|.|.+++.+|+|.|+|.|.|.+|...+ .+.|.
T Consensus 149 ~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~ 197 (208)
T 3r4d_A 149 SLQLTERMTLSQN--NSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLD 197 (208)
T ss_dssp ECCCCSSEEEETT--TTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEEC
T ss_pred eCCCCCCeEEcCC--CCEEEEeccCHHhCeEEEEEEecCCCcccCCceeee
Confidence 3556677877633 368999999999999999999999999887 35554
No 367
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=98.30 E-value=2.8e-06 Score=55.66 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=45.2
Q ss_pred CCCCeEEEEEEecC--CCCcceEEEEEEECCCCC--------CCcceEE---ecCCCeEEEEEEEEcC--CCCCC
Q psy15979 66 RLPNSYNITWMVSS--YTPLEEFKIKYRKIPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKR--FDRGN 125 (152)
Q Consensus 66 ~~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~--~G~g~ 125 (152)
...+++.|+|..+. +.++..|.|.|+...... ....++. |.+++.|.|+|.|.|. .|.|.
T Consensus 19 ~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~~~~~G~~~ 93 (103)
T 3t04_D 19 ATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAYDTFFPGYEP 93 (103)
T ss_dssp EETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEESCCCTTCCC
T ss_pred cCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeCCCCCCCC
Confidence 35789999999754 368999999999874321 1113444 6669999999999999 88887
No 368
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.28 E-value=1.1e-06 Score=65.89 Aligned_cols=41 Identities=27% Similarity=0.361 Sum_probs=34.9
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCc
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~ 57 (152)
.+.|.|.+++.+|+|.|+|+|.|.+|.+++++.|...+.+.
T Consensus 244 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 244 VRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp EEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC----
T ss_pred eEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEeccc
Confidence 56899999999999999999999999999999988776554
No 369
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.28 E-value=8.5e-07 Score=71.74 Aligned_cols=43 Identities=28% Similarity=0.378 Sum_probs=35.2
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
.|+.+..+ ++|.|.+|+.+|+|.|+|+|+|.+|.+++++.+.+
T Consensus 389 ~~~~~~~~---~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~v 431 (440)
T 3zyj_A 389 VRIAVLSD---GTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNV 431 (440)
T ss_dssp SSEEECTT---CCEEESSCCSTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ceEEEccC---CeEEEccCChhhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 35655433 46999999999999999999999999998766653
No 370
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=98.27 E-value=2.8e-06 Score=56.02 Aligned_cols=68 Identities=10% Similarity=0.062 Sum_probs=48.7
Q ss_pred CCCeEEEEE--EecC--CCCcceEEEEEEECCCCC-C--CcceE---EecCCCeEEEEEEEEcCCCCCCCCCCcccccc
Q psy15979 67 LPNSYNITW--MVSS--YTPLEEFKIKYRKIPGNE-P--SPMSN---QLTGTNQYQNRRLVRKRFDRGNSTNGGLIVPK 135 (152)
Q Consensus 67 ~~~~~~L~W--~~~~--~~pi~~y~~~~r~~~~~~-~--~~~~~---~L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~~~ 135 (152)
...++.|+| ..+. +.. ..|.|+|+...... . ....+ .|.+++.|.|+|+|.|..|.|.++....+.+.
T Consensus 22 ~~~sv~l~W~~~~P~~~ng~-~~Y~v~y~~~~~~~~~~~~~~~~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~ 99 (107)
T 1x5a_A 22 EPRQLELTWAGSRPRNPGGN-LSYELHVLNQDEEWHQMVLEPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTS 99 (107)
T ss_dssp ETTEEEEECCCCCSSCCSSC-CEEEEEEECSSCEEEEEESSSEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECC
T ss_pred CCCEEEEEECCCCCCCCCCc-eEEEEEEEeCCCCceEEEecceEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEEC
Confidence 468999999 6543 234 88999998761111 0 01114 46669999999999999999999987766554
No 371
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.27 E-value=5.3e-06 Score=66.36 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=61.2
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEE--ecCCCCceeecCCC---CCCCCeEEEEEEecCCCCcceEEEE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKIK 89 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v--~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~~pi~~y~~~ 89 (152)
.....|.|.+++. |+| |+|.|.|..|.....+.| ...|. .+...+. ......+.|.|.+.+..+...+.+.
T Consensus 47 ~~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~--~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~ 122 (450)
T 1z7z_I 47 NNRKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPE--RVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVV 122 (450)
T ss_dssp TTEEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCS--EEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEE
T ss_pred CCceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCC--cceecCCCceEeeCCeEEEEEEecCCCCCcCcEEE
Confidence 3456899999987 999 999998877766655444 44332 2222211 2246899999999876655423222
Q ss_pred EEECCCC--------CCCcceEEe-----cCCCeEEEEEEEEcCCCC
Q psy15979 90 YRKIPGN--------EPSPMSNQL-----TGTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 90 ~r~~~~~--------~~~~~~~~L-----~~~~~Y~~rV~A~N~~G~ 123 (152)
+.+.+.. ......+.| .+.+.|.| .|.|..|.
T Consensus 123 W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C--~a~n~~g~ 167 (450)
T 1z7z_I 123 LLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSC--RTELDLRP 167 (450)
T ss_dssp EEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEE--EEEEECGG
T ss_pred EeeCCEEeecccccccccceEEEEEeeccccCceEEE--EEEcccCC
Confidence 2222110 011123333 33789998 67888874
No 372
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=98.27 E-value=3.5e-06 Score=61.03 Aligned_cols=67 Identities=15% Similarity=0.147 Sum_probs=49.0
Q ss_pred CCCCeEEEEEEecC------CCCcceEEEEEEECCCCCCC-------cceEE---ecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 66 RLPNSYNITWMVSS------YTPLEEFKIKYRKIPGNEPS-------PMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 66 ~~~~~~~L~W~~~~------~~pi~~y~~~~r~~~~~~~~-------~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
...+++.|+|..+. ..++..|.++|+........ ..++. |.+++.|+|+|.|.|..|.|.++..
T Consensus 16 ~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~ 95 (211)
T 3p4l_A 16 LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMT 95 (211)
T ss_dssp CSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCC
T ss_pred cCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEEEEcCCCCCcccee
Confidence 34689999999753 46788999999986543211 12444 5669999999999999999998775
Q ss_pred ccc
Q psy15979 130 GLI 132 (152)
Q Consensus 130 ~~~ 132 (152)
..+
T Consensus 96 ~~~ 98 (211)
T 3p4l_A 96 AHG 98 (211)
T ss_dssp EEE
T ss_pred Eee
Confidence 544
No 373
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.27 E-value=4e-06 Score=61.10 Aligned_cols=75 Identities=13% Similarity=0.254 Sum_probs=49.3
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCc-----eEEEEEEec-CCCCc-eeecCCC--CCCCCeEEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK-----HRAYLELSG-KPNPA-IFRSHPQ--GRLPNSYNIT 74 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~-----~~~~~~v~~-~P~p~-~~~~~~~--~~~~~~~~L~ 74 (152)
.+|+.+..+ +...+|.|.+++.+|+|.|.|.+.|..|. ....+.|.. .|.+| +....+. ......+.|.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 143 (215)
T 1c5d_H 64 KSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLG 143 (215)
T ss_dssp GGGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEE
T ss_pred cCcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEE
Confidence 368888642 34678999999999999999999997431 123455553 33333 3322211 1235789999
Q ss_pred EEecCC
Q psy15979 75 WMVSSY 80 (152)
Q Consensus 75 W~~~~~ 80 (152)
|.+.+.
T Consensus 144 C~~~g~ 149 (215)
T 1c5d_H 144 CLVKGY 149 (215)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 998765
No 374
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.27 E-value=1.4e-06 Score=68.07 Aligned_cols=38 Identities=24% Similarity=0.300 Sum_probs=34.2
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
..++|.|.+++.+|+|.|+|+|+|.+|.++.++.|.+.
T Consensus 307 ~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 307 RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred cceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 36789999999999999999999999999998887654
No 375
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.27 E-value=6.1e-06 Score=60.38 Aligned_cols=77 Identities=16% Similarity=0.238 Sum_probs=50.5
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCce-----EEEEEEecCC-CCceeec-CCC-CCCCCeEEEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSGKP-NPAIFRS-HPQ-GRLPNSYNITW 75 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~~~v~~~P-~p~~~~~-~~~-~~~~~~~~L~W 75 (152)
.+|+.+..+ +...+|.|.+++.+|+|.|.|.+.|..+.. ...+.|...+ .+|.+.. ... ......+.|.|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C 144 (220)
T 2fbj_H 65 KDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGC 144 (220)
T ss_dssp TTTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEE
T ss_pred CCcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEE
Confidence 468888753 456789999999999999999999986531 1245555432 3333322 111 12357889999
Q ss_pred EecCCCC
Q psy15979 76 MVSSYTP 82 (152)
Q Consensus 76 ~~~~~~p 82 (152)
.+.+..|
T Consensus 145 ~~~g~~P 151 (220)
T 2fbj_H 145 LIHDYFP 151 (220)
T ss_dssp EEEEEBS
T ss_pred EEEeEEC
Confidence 8876533
No 376
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.27 E-value=1.7e-06 Score=57.74 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=50.4
Q ss_pred CCCeEEEEEEec----CCCCcceEEEEEEECCCCCC---------------CcceE---EecCCCeEEEEEEEEcCCCCC
Q psy15979 67 LPNSYNITWMVS----SYTPLEEFKIKYRKIPGNEP---------------SPMSN---QLTGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 67 ~~~~~~L~W~~~----~~~pi~~y~~~~r~~~~~~~---------------~~~~~---~L~~~~~Y~~rV~A~N~~G~g 124 (152)
..+++.|+|..+ .+.+|..|.++|+....... ....+ .|.+++.|.|+|.|.|..|.|
T Consensus 27 ~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 106 (125)
T 1uen_A 27 NSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG 106 (125)
T ss_dssp ETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEEEEEEEESSCEE
T ss_pred CCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEEEeCCCCCCCEEEEEEEEecCCCCC
Confidence 467999999975 24579999999987654321 01233 366699999999999999999
Q ss_pred CCCCCccccc
Q psy15979 125 NSTNGGLIVP 134 (152)
Q Consensus 125 ~~s~~~~~~~ 134 (152)
.++....+..
T Consensus 107 ~~S~~~~~~T 116 (125)
T 1uen_A 107 PASPDRVFNT 116 (125)
T ss_dssp EECCCEEEEC
T ss_pred CCCCCEEEEC
Confidence 9887665533
No 377
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.26 E-value=2.7e-06 Score=65.72 Aligned_cols=107 Identities=13% Similarity=0.133 Sum_probs=62.5
Q ss_pred EeEEEEceeCCCCCE-EEEEEEEcCCCceEEEE--EEecCCCCceeecC--CCCCCCCeEEEEEEecCCCCcceEEEEEE
Q psy15979 17 RHTLMIRKVVASDFG-NYSCEATNPMGKHRAYL--ELSGKPNPAIFRSH--PQGRLPNSYNITWMVSSYTPLEEFKIKYR 91 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G-~YtC~A~N~~G~~~~~~--~v~~~P~p~~~~~~--~~~~~~~~~~L~W~~~~~~pi~~y~~~~r 91 (152)
.+.|.|.+++.+|+| .|+|.|.|..|...... .+...| |..+... ........+.|.|.+.+.++...+.| |+
T Consensus 88 ~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~-p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W-~k 165 (329)
T 3oq3_B 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKP-PSCIPETYELGTHDKYGIDLYCGILYAKHYNNITW-YK 165 (329)
T ss_dssp TTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCC-CSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEE-EE
T ss_pred cceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCC-CcEeccccceEEeCCCcEEEEeccCCCCCCceEEE-EE
Confidence 458999999999999 99999999999766543 222222 2111111 11223678999998877542334444 33
Q ss_pred ECCC---CCCC----cceEE-----ecCCCeEEEEEEEEcC--CCCCCCC
Q psy15979 92 KIPG---NEPS----PMSNQ-----LTGTNQYQNRRLVRKR--FDRGNST 127 (152)
Q Consensus 92 ~~~~---~~~~----~~~~~-----L~~~~~Y~~rV~A~N~--~G~g~~s 127 (152)
.... .... ...+. ..+.+.|.| .|.|. +|....+
T Consensus 166 ~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C--~a~n~~~~g~~~~~ 213 (329)
T 3oq3_B 166 NNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDC--YVHYDDVRIKNDIV 213 (329)
T ss_dssp TTEECCCSSSSEEEETTEEEECSCCGGGCEEEEE--EEEECCTTSSSCEE
T ss_pred CCccCCCCCceEecCCCEEEEeecChhhCEEEEE--EEEecccCCCceeE
Confidence 2110 0000 12233 334889999 56776 7755443
No 378
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.26 E-value=4.4e-06 Score=61.39 Aligned_cols=75 Identities=19% Similarity=0.274 Sum_probs=48.8
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCC------c-----eEEEEEEec-CCCCce-eecCCC--CCCC
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG------K-----HRAYLELSG-KPNPAI-FRSHPQ--GRLP 68 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G------~-----~~~~~~v~~-~P~p~~-~~~~~~--~~~~ 68 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..| . ....+.|.. .+.+|. ....+. ....
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g 145 (228)
T 3bae_H 66 ESRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTG 145 (228)
T ss_dssp GGGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CC
T ss_pred CCcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCC
Confidence 368887642 3467899999999999999999999875 1 113455553 233333 322211 1245
Q ss_pred CeEEEEEEecCC
Q psy15979 69 NSYNITWMVSSY 80 (152)
Q Consensus 69 ~~~~L~W~~~~~ 80 (152)
..+.|.|.+.+.
T Consensus 146 ~~~~l~C~~~g~ 157 (228)
T 3bae_H 146 SSVTLGCLVKGY 157 (228)
T ss_dssp SEEEEEEEEEEE
T ss_pred CCEEEEEEEccE
Confidence 789999998764
No 379
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.26 E-value=2.3e-06 Score=66.65 Aligned_cols=77 Identities=13% Similarity=0.200 Sum_probs=51.4
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCceEE--EEEEec-CCCCceee-cCC--CCCCCCeEEEEEEe
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSG-KPNPAIFR-SHP--QGRLPNSYNITWMV 77 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~~~v~~-~P~p~~~~-~~~--~~~~~~~~~L~W~~ 77 (152)
++|+.+..+ +...+|.|.+++.+|+|.|+|.|.|..+.... .+.|.. .+.+|.+. ..+ .......+.|.|.+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 144 (344)
T 1za6_B 65 KGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 144 (344)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE
Confidence 468888653 45678999999999999999999996544322 455542 33444332 221 11346799999998
Q ss_pred cCCCC
Q psy15979 78 SSYTP 82 (152)
Q Consensus 78 ~~~~p 82 (152)
.++.|
T Consensus 145 ~g~~P 149 (344)
T 1za6_B 145 KDYFP 149 (344)
T ss_dssp EEEBS
T ss_pred eeEEC
Confidence 76533
No 380
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.26 E-value=9.1e-07 Score=59.26 Aligned_cols=43 Identities=19% Similarity=0.306 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCC-ceEEEEEEe
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG-KHRAYLELS 51 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G-~~~~~~~v~ 51 (152)
.+|..+..+ ++|.|.||+.+|+|.|+|.+.|..| ..++++.|.
T Consensus 63 ~gR~~~~~n---gSL~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~ 106 (111)
T 2qsq_A 63 SGREIIYPN---ASLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFR 106 (111)
T ss_dssp CSCEEECTT---SCEEECSCCGGGCEEEEEEEEETTSCCEEEEEEEE
T ss_pred CCcEEEecC---CcEEEccCcccCCeEEEEEEEeCCCcEEEEEEEEE
Confidence 478888644 4899999999999999999999977 456565554
No 381
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.26 E-value=1.2e-05 Score=53.46 Aligned_cols=74 Identities=9% Similarity=0.088 Sum_probs=50.3
Q ss_pred CCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCC------CCcceEE---ecCCCeEEEEEEEEcCCCC
Q psy15979 53 KPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE------PSPMSNQ---LTGTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 53 ~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~------~~~~~~~---L~~~~~Y~~rV~A~N~~G~ 123 (152)
.|.||..... .....+++.|+|..+. ..+..|.+.|+...... .....+. |.+++.|.|+|.|.|..|.
T Consensus 7 ~p~~P~~l~~-~~~t~~sv~lsW~~p~-~~i~~Y~v~y~~~~~~~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~~~ 84 (115)
T 2cuh_A 7 GPDGPTQLRA-LNLTEGFAVLHWKPPQ-NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNL 84 (115)
T ss_dssp CCSSCEEEEC-CCCSSSCEEEEEECCS-SCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTEE
T ss_pred CCCCCcceEE-EeccCCeEEEEEECCC-CCccEEEEEEEcCCCCcEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCCCc
Confidence 4555543321 2334789999999764 46889999998754321 1113444 5569999999999999888
Q ss_pred CCCCC
Q psy15979 124 GNSTN 128 (152)
Q Consensus 124 g~~s~ 128 (152)
|.+..
T Consensus 85 s~~~~ 89 (115)
T 2cuh_A 85 TSPAS 89 (115)
T ss_dssp CCCEE
T ss_pred CCCEE
Confidence 87653
No 382
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.26 E-value=1.1e-06 Score=68.83 Aligned_cols=79 Identities=20% Similarity=0.173 Sum_probs=47.7
Q ss_pred CCcEEEEEcCCEeEEEEceeCC-CCCEEEEEEEEcCCCceEE---EEEEecCCCCceeecCC-CCCCCCeEEEEEEecCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVA-SDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSY 80 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~-~D~G~YtC~A~N~~G~~~~---~~~v~~~P~p~~~~~~~-~~~~~~~~~L~W~~~~~ 80 (152)
+.|+.+. .+.|.|.++.. +|+|.|+|+|.|..|.... .+.|...|......... .......+.|.|.+...
T Consensus 53 ~~~~~~~----~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~ 128 (382)
T 1cs6_A 53 DSRYRLV----AGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPH 128 (382)
T ss_dssp TSSEEEE----TTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSE
T ss_pred CccEEee----CCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCC
Confidence 4567664 24799999997 9999999999999997643 44444333211110000 01235678888876443
Q ss_pred CCcceEEE
Q psy15979 81 TPLEEFKI 88 (152)
Q Consensus 81 ~pi~~y~~ 88 (152)
.|...+.|
T Consensus 129 ~p~~~i~W 136 (382)
T 1cs6_A 129 YPALSYRW 136 (382)
T ss_dssp ESCCEEEE
T ss_pred CCCcEEEE
Confidence 34344544
No 383
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.26 E-value=4.9e-07 Score=59.69 Aligned_cols=51 Identities=25% Similarity=0.331 Sum_probs=37.7
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCce--EEEEEEecCCCC
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELSGKPNP 56 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~~~v~~~P~p 56 (152)
++|+.+.. .....+|+|.+++.+|+|.|.|.+.|..+.. ...+.|.+.|.+
T Consensus 59 ~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~p~~ 113 (116)
T 2or8_A 59 SSRYNLKGHISEGDVSLTIENSVESDSGLYCCRVEIPGWFNDQKVTFSLQVKPEL 113 (116)
T ss_dssp STTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCSSTTCCEEEEEEEEEECSC
T ss_pred CCeEEEecCCCCCeEEEEECCCCcccCEEEEEEEEcCCcccccEEEEEEEECCcc
Confidence 46676631 3345689999999999999999999976543 666777766543
No 384
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.25 E-value=8.9e-07 Score=64.44 Aligned_cols=36 Identities=28% Similarity=0.320 Sum_probs=32.0
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
.++|.|.+++.+|+|.|+|.|.|..|.....+.|.+
T Consensus 170 ~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 205 (213)
T 2x1w_L 170 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 205 (213)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred eEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEE
Confidence 457999999999999999999999999988766654
No 385
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.25 E-value=2.9e-06 Score=62.65 Aligned_cols=75 Identities=16% Similarity=0.261 Sum_probs=46.9
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCC-----c---eEEEEEEec---CCCCceee-cCCCC--C-CCC
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMG-----K---HRAYLELSG---KPNPAIFR-SHPQG--R-LPN 69 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----~---~~~~~~v~~---~P~p~~~~-~~~~~--~-~~~ 69 (152)
.+|+.+.. .....+|.|.+++.+|+|.|.|.+.|..| . ....+.|.. .+.+|.+. ..+.. . ...
T Consensus 61 ~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~ 140 (245)
T 3nfj_J 61 PQNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQ 140 (245)
T ss_dssp CCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHS
T ss_pred CCcEEEEecCCCEEEEEECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCC
Confidence 35777654 34677899999999999999999999443 1 112344544 22333332 11111 1 147
Q ss_pred eEEEEEEecCC
Q psy15979 70 SYNITWMVSSY 80 (152)
Q Consensus 70 ~~~L~W~~~~~ 80 (152)
.+.|.|.+.+.
T Consensus 141 ~~~l~C~~~g~ 151 (245)
T 3nfj_J 141 KATLVCLATGF 151 (245)
T ss_dssp EEEEEEEEEEE
T ss_pred ceEEEEEEccC
Confidence 88999998764
No 386
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.25 E-value=7.8e-07 Score=58.68 Aligned_cols=47 Identities=17% Similarity=0.335 Sum_probs=36.8
Q ss_pred CCcEEEEEc---CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 6 TERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 6 ~~r~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..|.....+.|.+
T Consensus 74 ~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V 123 (126)
T 1eaj_A 74 KGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 123 (126)
T ss_dssp TTTEEECCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCeeEEEcccccCCeEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEE
Confidence 356666432 23467999999999999999999999998777766653
No 387
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.25 E-value=1.6e-06 Score=65.37 Aligned_cols=38 Identities=26% Similarity=0.348 Sum_probs=33.5
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
..+.|.|.+++.+|+|.|+|.|.|.+|.+...+.|...
T Consensus 250 ~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 287 (290)
T 2o26_X 250 RQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVV 287 (290)
T ss_dssp EEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC-
T ss_pred EEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEE
Confidence 45789999999999999999999999999888777653
No 388
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.25 E-value=8.3e-07 Score=68.20 Aligned_cols=39 Identities=28% Similarity=0.380 Sum_probs=34.1
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNP 56 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p 56 (152)
+.|.|.+++.+|+|.|+|.|.|.+|.+...+.|.+.+.|
T Consensus 291 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 329 (334)
T 1ry7_B 291 EVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAE 329 (334)
T ss_dssp CCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSC
T ss_pred cEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECC
Confidence 479999999999999999999999999998777655444
No 389
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.25 E-value=9.9e-07 Score=66.00 Aligned_cols=106 Identities=14% Similarity=0.046 Sum_probs=61.8
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcC-CCceE---EE--EEEecCCCCceeecCC--CCCCCCeEEEEEEecCCCCcceE
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNP-MGKHR---AY--LELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEF 86 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~-~G~~~---~~--~~v~~~P~p~~~~~~~--~~~~~~~~~L~W~~~~~~pi~~y 86 (152)
+..+.|.|..+..+|.|.|+|.|.|. .|... .. +.|..+|......... .......+.|.|.+.+.++. .+
T Consensus 139 ~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p-~i 217 (265)
T 2oz4_A 139 GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLP-EL 217 (265)
T ss_dssp SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCC-EE
T ss_pred CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCC-eE
Confidence 35577999999999999999999964 48765 33 4444444321110000 01235788888887665432 23
Q ss_pred EEEEEECCCCCC-Cc-ceEEecCCCeEEEEEEEEcCCCCC
Q psy15979 87 KIKYRKIPGNEP-SP-MSNQLTGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 87 ~~~~r~~~~~~~-~~-~~~~L~~~~~Y~~rV~A~N~~G~g 124 (152)
.| ++....... .. .....++.+.|.| .|.|.+|..
T Consensus 218 ~W-~~~~~~~~~~g~~~~v~~~d~G~Y~C--~a~N~~G~~ 254 (265)
T 2oz4_A 218 KC-LKDGTFPLPIGESVTVTRDLEGTYLC--RARSTQGEV 254 (265)
T ss_dssp EE-EETTTEECCTTSCEECCGGGCEEEEE--EEEETTEEE
T ss_pred EE-EECCcccCCCCcEEEeehhhCeEEEE--EEECCCCcE
Confidence 33 333210001 11 2234556899988 779999865
No 390
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.24 E-value=4.9e-07 Score=59.41 Aligned_cols=67 Identities=13% Similarity=0.217 Sum_probs=49.5
Q ss_pred CCCCeEEEEEEecCCCCcceEEEEEEECCCCC-------C-CcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCcccc
Q psy15979 66 RLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE-------P-SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIV 133 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~-------~-~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~ 133 (152)
...+++.|.|..+. .++..|.|+|+...... . ....+. |.+++.|+|+|.|.|..|.|.++.....+
T Consensus 19 ~t~~si~lsW~~p~-g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~g~~s~~~~~T 96 (105)
T 2ekj_A 19 ETPDSLQVSWTPPL-GRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSATGQT 96 (105)
T ss_dssp EETTEEEEEEECCS-SCCSBBCBBCCCTTSCSCCCCBCCBTTSSEEEECSCCSSCCCBCBBCBBCSSCBCCCBCCBCCC
T ss_pred CCCCEEEEEEeCCC-CcceEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCccCCccccEEEc
Confidence 34689999999874 57889999997754321 1 113444 66699999999999999999988654433
No 391
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=98.24 E-value=4.4e-06 Score=59.20 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=54.0
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecC---CCCcceEEEEEEECCCCCCC-------cceE---EecCCCeEEEEEEEE
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSS---YTPLEEFKIKYRKIPGNEPS-------PMSN---QLTGTNQYQNRRLVR 118 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~---~~pi~~y~~~~r~~~~~~~~-------~~~~---~L~~~~~Y~~rV~A~ 118 (152)
++|.||..... .....+++.|+|..+. ..++..|.++|+......+. ...+ .|.+++.|.|+|.|.
T Consensus 4 ~~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 82 (197)
T 3lpw_A 4 DTPGPPQDLKV-KEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAE 82 (197)
T ss_dssp CSCCCCEEEEE-EEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEE
T ss_pred CCCCCCCCcEE-EEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEE
Confidence 46766643321 1235689999999853 24689999999987644321 1333 466699999999999
Q ss_pred cCCCCCCCCCC
Q psy15979 119 KRFDRGNSTNG 129 (152)
Q Consensus 119 N~~G~g~~s~~ 129 (152)
|..|.|.++..
T Consensus 83 ~~~g~~~~s~~ 93 (197)
T 3lpw_A 83 NEYGIGLPAET 93 (197)
T ss_dssp ETTEECCCEEC
T ss_pred cCccccCCCCC
Confidence 99999987754
No 392
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.23 E-value=5.3e-06 Score=61.34 Aligned_cols=75 Identities=11% Similarity=0.186 Sum_probs=48.6
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCC---c----eEEEEEEecC---CCCceee-cCCC--C-CCCCe
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMG---K----HRAYLELSGK---PNPAIFR-SHPQ--G-RLPNS 70 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G---~----~~~~~~v~~~---P~p~~~~-~~~~--~-~~~~~ 70 (152)
.+|+.+.. .+...+|.|.+++.+|+|.|.|.+.|..| . ....+.|... +.||.+. ..+. . .....
T Consensus 59 ~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 138 (238)
T 1bec_A 59 PDGYKASRPSQEQFSLILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQK 138 (238)
T ss_dssp CTTCEEECCSSSEEEEEESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCS
T ss_pred cceEEEEecCCCEEEEEEecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCc
Confidence 46777753 24567899999999999999999999752 1 1123555542 2344332 2221 1 13578
Q ss_pred EEEEEEecCC
Q psy15979 71 YNITWMVSSY 80 (152)
Q Consensus 71 ~~L~W~~~~~ 80 (152)
+.|.|.+.+.
T Consensus 139 ~~L~C~~~g~ 148 (238)
T 1bec_A 139 ATLVCLARGF 148 (238)
T ss_dssp CSEEEEEEEE
T ss_pred eEEEEEEeeE
Confidence 8999998764
No 393
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.23 E-value=2.8e-05 Score=57.56 Aligned_cols=78 Identities=19% Similarity=0.282 Sum_probs=48.5
Q ss_pred CCCcEEEEEcC--CEeEEEEceeCCCCCEEEEEEEEcCC-Cc--------eEEEEEEecCC-------CCceeecCCCC-
Q psy15979 5 TTERRIMETRG--SRHTLMIRKVVASDFGNYSCEATNPM-GK--------HRAYLELSGKP-------NPAIFRSHPQG- 65 (152)
Q Consensus 5 ~~~r~~i~~~~--~~~~L~I~~v~~~D~G~YtC~A~N~~-G~--------~~~~~~v~~~P-------~p~~~~~~~~~- 65 (152)
.++|+.+..+. ...+|.|.+++.+|+|.|.|.+.|.. |. ....+.|...| .|..+......
T Consensus 65 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~ 144 (242)
T 1hxm_B 65 PSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAET 144 (242)
T ss_dssp CTTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGG
T ss_pred cCCeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhc
Confidence 35788886432 57889999999999999999999863 11 11245555432 22222110011
Q ss_pred CCCCeEEEEEEecCCCC
Q psy15979 66 RLPNSYNITWMVSSYTP 82 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~p 82 (152)
.....+.|.|.+.+..|
T Consensus 145 ~~g~~v~L~C~~~g~~P 161 (242)
T 1hxm_B 145 KLQKAGTYLCLLEKFFP 161 (242)
T ss_dssp GSSSCEEEEEEEEEESS
T ss_pred ccCCCceEEEEEeeEEC
Confidence 12567899999876544
No 394
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=98.22 E-value=6.5e-06 Score=60.77 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=54.3
Q ss_pred CCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCCC-------CcceEE---ecCCCeEEEEEEEEcCCC
Q psy15979 53 KPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNEP-------SPMSNQ---LTGTNQYQNRRLVRKRFD 122 (152)
Q Consensus 53 ~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~~-------~~~~~~---L~~~~~Y~~rV~A~N~~G 122 (152)
+|.||..... .....+++.|+|..+. .++..|.++|+....... ...++. |.+++.|+|+|.|.|..|
T Consensus 5 p~~~P~~l~~-~~~~~~si~l~W~~p~-g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 82 (234)
T 3f7q_A 5 DLGAPQNPNA-KAAGSRKIHFNWLPPS-GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQG 82 (234)
T ss_dssp CCCCCEEEEE-EECSSSCEEEEEECCS-SCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCCCCcceEE-EEcCCCEEEEEEECCC-CccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEeCCC
Confidence 4555543221 1234679999999873 478999999998754321 113343 566999999999999999
Q ss_pred CCCCCCCccc
Q psy15979 123 RGNSTNGGLI 132 (152)
Q Consensus 123 ~g~~s~~~~~ 132 (152)
.|.++....+
T Consensus 83 ~g~~s~~~~~ 92 (234)
T 3f7q_A 83 EGPYSSLVSC 92 (234)
T ss_dssp ECCCCCCEEE
T ss_pred cCCCCCeEEE
Confidence 9988865544
No 395
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=98.22 E-value=5e-06 Score=55.73 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=47.1
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCC--------CCcceEE---ecCCCeEEEEEEEEcC
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKR 120 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~ 120 (152)
|.|.||..... .....+++.|+|..+. .++..|.|.|+...... ....++. |.+++.|.|+|.|.|.
T Consensus 2 GvP~~P~~L~v-~~~t~~Sv~lsW~~p~-g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~~ 79 (114)
T 3qwq_B 2 GVSDVPRDLEV-VAATPTSLLISWDSGR-GSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAVTD 79 (114)
T ss_dssp ---CCCEEEEE-EEEETTEEEEEEECCS-CCCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred CCCCCCCceEE-EecCCCEEEEEEcCCc-CcccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEEC
Confidence 56766654321 1235689999999764 57899999999875431 1123444 5569999999999999
Q ss_pred CC
Q psy15979 121 FD 122 (152)
Q Consensus 121 ~G 122 (152)
.|
T Consensus 80 ~G 81 (114)
T 3qwq_B 80 HK 81 (114)
T ss_dssp EE
T ss_pred Cc
Confidence 99
No 396
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.22 E-value=9.1e-07 Score=64.05 Aligned_cols=41 Identities=24% Similarity=0.404 Sum_probs=32.5
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCc
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPA 57 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~ 57 (152)
.+.|.|.+++.+|+|.|+|.|.|..|.....+.|. .+|.||
T Consensus 184 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 184 AEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAP 226 (231)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC---
T ss_pred ccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCC
Confidence 35799999999999999999999999988865554 555554
No 397
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.22 E-value=4.2e-06 Score=64.28 Aligned_cols=104 Identities=13% Similarity=0.031 Sum_probs=59.4
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCce---EEEEEEec-CCCCceeecCC-CCCCCCeEEEEEEecCC-CCcceEEEEEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSG-KPNPAIFRSHP-QGRLPNSYNITWMVSSY-TPLEEFKIKYR 91 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~~~v~~-~P~p~~~~~~~-~~~~~~~~~L~W~~~~~-~pi~~y~~~~r 91 (152)
+.|.|.....+|.|.|+|+|.|..|.. .....+.. ...||.+...+ .......+.|.|.+.+. ++...+.|. +
T Consensus 180 s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~~p~~~~v~W~-k 258 (327)
T 2wng_A 180 STAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWL-E 258 (327)
T ss_dssp EEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEEBSSCEEEEEE-E
T ss_pred EEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccccCCCcEEEEE-E
Confidence 458888777778899999999998873 33444432 23333333211 12346789999998764 332244443 2
Q ss_pred ECC---C---CC---CCc------ceEEe-----cCCCeEEEEEEEEcCCCCC
Q psy15979 92 KIP---G---NE---PSP------MSNQL-----TGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 92 ~~~---~---~~---~~~------~~~~L-----~~~~~Y~~rV~A~N~~G~g 124 (152)
.-. . .. ..+ ..+.| ++.+.|.| .|.|..|..
T Consensus 259 ~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C--~a~N~~~~~ 309 (327)
T 2wng_A 259 NGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTC--QVEHDGQPA 309 (327)
T ss_dssp TTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEE--EEEETTCCC
T ss_pred CCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEE--EEEeCCCCC
Confidence 110 0 00 011 11223 35899999 679998754
No 398
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.22 E-value=3.1e-06 Score=59.00 Aligned_cols=69 Identities=10% Similarity=0.133 Sum_probs=49.3
Q ss_pred CCCCeEEEEEEecCCC---------C--cceEEEEEEECCCCCCC-------cceE---EecCCCeEEEEEEEEcCCCCC
Q psy15979 66 RLPNSYNITWMVSSYT---------P--LEEFKIKYRKIPGNEPS-------PMSN---QLTGTNQYQNRRLVRKRFDRG 124 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~---------p--i~~y~~~~r~~~~~~~~-------~~~~---~L~~~~~Y~~rV~A~N~~G~g 124 (152)
..++++.|+|..+... . +..|.+.|+........ ..++ .|.+++.|.|||.|+|..|.|
T Consensus 29 i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~~~g~~ts~~v~~L~P~T~Y~~rV~A~n~~G~G 108 (137)
T 1wk0_A 29 IQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKG 108 (137)
T ss_dssp CCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEESCSEEEECSCCTTCEECEEEEEEETTEEC
T ss_pred EccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEEEecCccEEEEcCCCCCCEEEEEEEEEeCCCcC
Confidence 4579999999975322 1 57899988765432211 1233 366699999999999999999
Q ss_pred CCCCCccccc
Q psy15979 125 NSTNGGLIVP 134 (152)
Q Consensus 125 ~~s~~~~~~~ 134 (152)
.+|....|.+
T Consensus 109 ~~S~~~~f~T 118 (137)
T 1wk0_A 109 TPSEAEIFTT 118 (137)
T ss_dssp CCCCCCCEEC
T ss_pred CCCCCEEEEC
Confidence 9998775533
No 399
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=98.21 E-value=3.1e-06 Score=57.28 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=46.7
Q ss_pred CCCCeEEEEEEecCCCCcceEEEEEEECCCCC--------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 66 RLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
...+++.|.|..+.. .+..|.|.|+...... ....++. |.+++.|.|+|.|.|..|.|.++.
T Consensus 40 ~t~~Si~lsW~~p~~-~i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~~~~G~g~~Ss 112 (121)
T 2ocf_D 40 ATPTSLLISWDAPAV-TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAGS 112 (121)
T ss_dssp ECSSCEEEEEECCSS-CCCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEEEEEEECCHHHHHHSC
T ss_pred cCCCEEEEEEcCCCC-CCcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCCccCCCC
Confidence 356899999997653 5889999999875432 1113344 566999999999999999987653
No 400
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.21 E-value=6.2e-07 Score=57.95 Aligned_cols=29 Identities=28% Similarity=0.465 Sum_probs=26.5
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR 45 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~ 45 (152)
.+.|.|.+++.+|+|.|+|.|.|..|...
T Consensus 75 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~ 103 (112)
T 3so5_A 75 TTILRLRNVEFTSEGXYQCVISNHFGSSY 103 (112)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceEEEEeccccccCCeEEEEEEeCCCcEE
Confidence 47899999999999999999999999843
No 401
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.21 E-value=1.1e-06 Score=58.44 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=33.1
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCc--eEEEEEEecCCCC
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGK--HRAYLELSGKPNP 56 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~--~~~~~~v~~~P~p 56 (152)
.+|+.+.. .....+|.|.+++.+|+|.|.|.+.|..|. ....+.|.+.+.|
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 67 KERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp TTCEEECCBGGGTBCCEEECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC--
T ss_pred cCcEEEecCCcCCeEEEEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 35777642 234568999999999999999999998875 3455565544433
No 402
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=98.21 E-value=6.4e-05 Score=54.58 Aligned_cols=106 Identities=12% Similarity=0.055 Sum_probs=65.9
Q ss_pred CCEEEEEEEEcCCCceEEE---EEEe--cCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCCCC----
Q psy15979 29 DFGNYSCEATNPMGKHRAY---LELS--GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNEPS---- 99 (152)
Q Consensus 29 D~G~YtC~A~N~~G~~~~~---~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~~~---- 99 (152)
....|...+.|..|..... +.+. ++|.||....... .....+.|+|..+.....+.|.|+|+......+.
T Consensus 69 ~~~~~~i~v~~~~g~~~s~~~~~~~~~iVkP~pP~~l~~~~-~~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~ 147 (199)
T 2b5i_C 69 LYQTFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHK-LSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV 147 (199)
T ss_dssp TTSCEEEEEECSSCTTCEEEEEECGGGSEECCCCEEEEEEE-EETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEE
T ss_pred cceEEEEEEEeCCcceecceEEEchHHceecCCCcEEEEEE-CCCCCEEEEECCCCCCCceEEEEEEeecCCcccEEEec
Confidence 3446777777777765442 2222 4688876442111 1236899999987533456899999987543321
Q ss_pred --cceE---EecCCCeEEEEEEEEcCCC------CCCCCCCcccccc
Q psy15979 100 --PMSN---QLTGTNQYQNRRLVRKRFD------RGNSTNGGLIVPK 135 (152)
Q Consensus 100 --~~~~---~L~~~~~Y~~rV~A~N~~G------~g~~s~~~~~~~~ 135 (152)
...+ .|.+++.|+|||+|+...| ||+.|....+..+
T Consensus 148 ~~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 148 DYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp CSSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred cCceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 1233 3566999999999998543 7777777666544
No 403
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.21 E-value=7.1e-06 Score=60.38 Aligned_cols=75 Identities=13% Similarity=0.206 Sum_probs=46.6
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCce---EEEEEEec-CCCCce-eecCCC--CCCCCeEEEEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSG-KPNPAI-FRSHPQ--GRLPNSYNITWM 76 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~~~v~~-~P~p~~-~~~~~~--~~~~~~~~L~W~ 76 (152)
.+|+.+..+ +...+|.|.+++.+|+|.|.|.+.|..+.. ...+.|.. .+.+|. +...+. ......+.|.|.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~ 144 (227)
T 1mju_H 65 KNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCL 144 (227)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEE
T ss_pred CCcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEE
Confidence 468888643 457789999999999999999999963211 12455554 223333 322211 123578899999
Q ss_pred ecCC
Q psy15979 77 VSSY 80 (152)
Q Consensus 77 ~~~~ 80 (152)
+.+.
T Consensus 145 ~~g~ 148 (227)
T 1mju_H 145 VKGY 148 (227)
T ss_dssp EEEE
T ss_pred eecE
Confidence 8764
No 404
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.20 E-value=5.9e-06 Score=65.69 Aligned_cols=83 Identities=14% Similarity=0.223 Sum_probs=52.6
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCC-----c--eEEEEEEecCC-CCce-eecCCC--CCCCCeEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-----K--HRAYLELSGKP-NPAI-FRSHPQ--GRLPNSYN 72 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----~--~~~~~~v~~~P-~p~~-~~~~~~--~~~~~~~~ 72 (152)
.+|+.+..+ +....|.|.+++.+|+|.|+|.|.|..| . ....+.|...+ .+|. +...+. ......+.
T Consensus 283 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~ 362 (438)
T 1qgc_4 283 KGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVT 362 (438)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEE
T ss_pred CCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEE
Confidence 467877653 4567899999999999999999999544 1 12345555322 3333 222211 12468899
Q ss_pred EEEEecCCCCcc-eEEE
Q psy15979 73 ITWMVSSYTPLE-EFKI 88 (152)
Q Consensus 73 L~W~~~~~~pi~-~y~~ 88 (152)
|.|.+.+..|.. .+.|
T Consensus 363 L~C~~~g~~P~~~~v~W 379 (438)
T 1qgc_4 363 LGCLVKGYFPEPVTVTW 379 (438)
T ss_dssp EEEEEESCBSSCCEEEE
T ss_pred EEEEeccccCCCcEEEE
Confidence 999998763332 4444
No 405
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.20 E-value=9.7e-07 Score=62.32 Aligned_cols=41 Identities=29% Similarity=0.457 Sum_probs=33.3
Q ss_pred ccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEE
Q psy15979 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (152)
Q Consensus 3 l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (152)
|..+.++.+... +.|.|.+++.+|+|.|+|.|.|.+|...+
T Consensus 141 ~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s 181 (192)
T 2iep_A 141 LRENSRIAVLES---GSLRIHNVQKEDAGQYRCVAKNSLGTAYS 181 (192)
T ss_dssp CCCCSSEEECTT---SCEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred ccCCCcEEEecC---CcEEEecCChhhCEEEEEEEEcCCCcEEE
Confidence 455667766433 37999999999999999999999998854
No 406
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.20 E-value=2.1e-06 Score=58.52 Aligned_cols=49 Identities=22% Similarity=0.309 Sum_probs=37.8
Q ss_pred CCcEEEE--EcCCEeEEEEceeCCCCCEEEEEEEEcCCCce------EEEEEEecCC
Q psy15979 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPMGKH------RAYLELSGKP 54 (152)
Q Consensus 6 ~~r~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~------~~~~~v~~~P 54 (152)
.+||.+. ..+...+|+|.+++.+|+|.|.|.+.|..+.. .+.+.|..+|
T Consensus 61 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 61 DCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKLQIKESLRAELRVTERR 117 (129)
T ss_dssp -CCEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECGGGCEEEECCCEEEEEECCC
T ss_pred CCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEecCCCceeeEeceEEEEEecCc
Confidence 3688886 34567899999999999999999999988765 2346666554
No 407
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.20 E-value=4.7e-06 Score=61.50 Aligned_cols=76 Identities=13% Similarity=0.183 Sum_probs=48.4
Q ss_pred CcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCc------eEEEEEEec---CCCCcee-ecCCCC---CCCCeEE
Q psy15979 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGK------HRAYLELSG---KPNPAIF-RSHPQG---RLPNSYN 72 (152)
Q Consensus 7 ~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~------~~~~~~v~~---~P~p~~~-~~~~~~---~~~~~~~ 72 (152)
+|+.+.. .....+|.|.+++.+|+|.|.|.|.|..+. ....+.|.. .+.+|.+ ...+.. .....+.
T Consensus 65 ~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~ 144 (246)
T 4dzb_B 65 DKFLINHASLTLSTLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 144 (246)
T ss_dssp GGEEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CcEEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEE
Confidence 6787764 345778999999999999999999987542 112344443 2233332 222211 1147899
Q ss_pred EEEEecCCCC
Q psy15979 73 ITWMVSSYTP 82 (152)
Q Consensus 73 L~W~~~~~~p 82 (152)
|.|.+.+..|
T Consensus 145 L~C~~~g~~p 154 (246)
T 4dzb_B 145 LVCLATGFYP 154 (246)
T ss_dssp EEEEEEEEBS
T ss_pred EEEEEccCcC
Confidence 9999876443
No 408
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.19 E-value=5.2e-06 Score=62.89 Aligned_cols=77 Identities=13% Similarity=0.226 Sum_probs=48.7
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCC--------ceEEEEEEecC---CCCceeecC-CCC---CCCC
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMG--------KHRAYLELSGK---PNPAIFRSH-PQG---RLPN 69 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G--------~~~~~~~v~~~---P~p~~~~~~-~~~---~~~~ 69 (152)
.+|+.+.. .+...+|.|.+++.+|+|.|+|.|.|..| .....+.|... +.||.+... +.. ....
T Consensus 87 ~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~ 166 (279)
T 2wbj_D 87 KDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQ 166 (279)
T ss_dssp SSSEEEEECSSSEEEEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHS
T ss_pred CCcEEEEeCCCCEEEEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCC
Confidence 46888875 35677999999999999999999999532 01124555442 234443321 111 0246
Q ss_pred eEEEEEEecCCCC
Q psy15979 70 SYNITWMVSSYTP 82 (152)
Q Consensus 70 ~~~L~W~~~~~~p 82 (152)
.+.|.|.+.+..|
T Consensus 167 ~v~L~C~~~g~~P 179 (279)
T 2wbj_D 167 KATLVCLATGFYP 179 (279)
T ss_dssp CCEEEEEEEEEBS
T ss_pred ceEEEEEEeeEcC
Confidence 7889998876533
No 409
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.19 E-value=1.9e-06 Score=56.60 Aligned_cols=49 Identities=20% Similarity=0.319 Sum_probs=36.4
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCC-C---ceEEEEEEecCC
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPM-G---KHRAYLELSGKP 54 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G---~~~~~~~v~~~P 54 (152)
.+|+.+.. .....+|+|.+++.+|+|.|.|.+.|.. | .....+.|.+.|
T Consensus 54 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~~~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 54 NGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp ETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECTTSCCBCCCSEEEEEEEC-
T ss_pred cCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEEEecCccCccCCccEEEEEEEec
Confidence 46888763 3456789999999999999999999986 6 233456666555
No 410
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.19 E-value=2e-06 Score=67.47 Aligned_cols=48 Identities=27% Similarity=0.278 Sum_probs=39.6
Q ss_pred ccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 3 l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
|..++++.+.. .+.|.|.+++.+|+|.|+|+|.|.+|.+++.+.|...
T Consensus 353 ~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 353 VIPSDYFQIVG---GSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp CCCSSSEEEET---TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECC
T ss_pred CCCCCcEEEec---CccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 44556676653 3579999999999999999999999999998887654
No 411
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.18 E-value=9.6e-07 Score=65.77 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=34.6
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCCc
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p~ 57 (152)
....|.|.+++.+|+|.|+|.|.|..|.....+.|.....||
T Consensus 199 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p 240 (268)
T 3mj6_A 199 NDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEF 240 (268)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC--
T ss_pred CeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCC
Confidence 466899999999999999999999999988887776644333
No 412
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.17 E-value=7e-07 Score=59.23 Aligned_cols=46 Identities=30% Similarity=0.436 Sum_probs=33.9
Q ss_pred cccCCCcEEEE-EcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 2 RLETTERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 2 ~l~~~~r~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|..++|+.+. ..+..+.|.|.+++.+|+|.|+|.+ |.....+.|.
T Consensus 53 ~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~ 99 (115)
T 2cr6_A 53 PLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALR 99 (115)
T ss_dssp EECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEE
T ss_pred ECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEE
Confidence 45666777776 3466778999999999999999994 5555544444
No 413
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.16 E-value=3e-06 Score=63.73 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=32.4
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
..+.|.|.+++.+|+|.|+|.|.|.+|....+..|.
T Consensus 240 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 275 (289)
T 3mjg_X 240 IRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAIN 275 (289)
T ss_dssp EEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEE
Confidence 457899999999999999999999999999876665
No 414
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.16 E-value=2.4e-06 Score=55.98 Aligned_cols=36 Identities=28% Similarity=0.419 Sum_probs=31.3
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (152)
.+|+.+...+...+|+|.+++.+|+|.|.|.|.|..
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 59 PSRFSGSGSGTDFTLTISSLEPEDFAMYICQQHNEY 94 (108)
T ss_dssp CTTEEEEESSSEEEEEECSCCTTCCSEEEEEECSSS
T ss_pred CceEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 468888766677899999999999999999999963
No 415
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.16 E-value=1.3e-05 Score=59.73 Aligned_cols=28 Identities=18% Similarity=0.398 Sum_probs=24.7
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCC
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMG 42 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (152)
....+|.|.+++.+|+|.|.|.|.|..|
T Consensus 76 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 103 (259)
T 3omz_A 76 RKNLRMILRNLIENDSGVYYCATWDQNY 103 (259)
T ss_dssp -CCCEEEESSCCGGGCEEEEEEEECTTS
T ss_pred CCeEEEEECCCCcccCEEEEEEEeeCCc
Confidence 3456799999999999999999999877
No 416
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=98.15 E-value=1.3e-05 Score=52.18 Aligned_cols=57 Identities=19% Similarity=0.263 Sum_probs=43.4
Q ss_pred CCCeEEEEEEecC-CCCcceEEEEEEECCCCC-C-------CcceEE---ecCCCeEEEEEEEEcCCCC
Q psy15979 67 LPNSYNITWMVSS-YTPLEEFKIKYRKIPGNE-P-------SPMSNQ---LTGTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 67 ~~~~~~L~W~~~~-~~pi~~y~~~~r~~~~~~-~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~ 123 (152)
..+++.|+|..+. ..++..|.|.|+...... . ...++. |.+++.|.|+|.|.|..|.
T Consensus 17 t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~~~~ 85 (101)
T 3k2m_C 17 TPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGEDSA 85 (101)
T ss_dssp ETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEECTT
T ss_pred CCCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEEEcCCCccEEEECCCCCCCEEEEEEEEEeCCcc
Confidence 5689999999764 257899999999865421 1 113444 5669999999999999999
No 417
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.14 E-value=4.1e-06 Score=62.78 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=47.8
Q ss_pred CcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCC--ce--EEEEEEec---CCCCce-eecCCCC---CCCCeEEEE
Q psy15979 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMG--KH--RAYLELSG---KPNPAI-FRSHPQG---RLPNSYNIT 74 (152)
Q Consensus 7 ~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G--~~--~~~~~v~~---~P~p~~-~~~~~~~---~~~~~~~L~ 74 (152)
+|+.+.. .....+|.|.+++.+|+|.|.|.+.|..+ .. ...+.|.. .+.+|. ....+.. .....+.|.
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~ 167 (268)
T 3pl6_D 88 DRFFAVRPEGSVSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLV 167 (268)
T ss_dssp TTEEEECTTSSSEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEE
T ss_pred CcEEEEecCCCEEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEE
Confidence 7888864 34467899999999999999999998422 11 11344443 222333 2221111 114789999
Q ss_pred EEecCCCC
Q psy15979 75 WMVSSYTP 82 (152)
Q Consensus 75 W~~~~~~p 82 (152)
|.+.+..|
T Consensus 168 C~~~g~~p 175 (268)
T 3pl6_D 168 CLATGFYP 175 (268)
T ss_dssp EEEEEEBS
T ss_pred EEECcccC
Confidence 99876443
No 418
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.13 E-value=1.1e-05 Score=64.90 Aligned_cols=77 Identities=16% Similarity=0.296 Sum_probs=51.0
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCC------------c--eEEEEEEecCC-CCce-eecCC--CC
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG------------K--HRAYLELSGKP-NPAI-FRSHP--QG 65 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G------------~--~~~~~~v~~~P-~p~~-~~~~~--~~ 65 (152)
.+|+.+..+ +....|.|.+++.+|+|.|+|.|.|..| . ....+.|...+ .+|. +...+ ..
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~ 144 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKS 144 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCC
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccc
Confidence 468887653 4567899999999999999999999876 1 22345554422 2333 32221 11
Q ss_pred CCCCeEEEEEEecCCCC
Q psy15979 66 RLPNSYNITWMVSSYTP 82 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~p 82 (152)
.....+.|.|.+.+..|
T Consensus 145 ~~g~~v~L~C~~~g~~P 161 (457)
T 1hzh_H 145 TSGGTAALGCLVKDYFP 161 (457)
T ss_dssp CTTCCEEEEEEEESBBS
T ss_pred cCCCcEEEEEEEeEEeC
Confidence 24678999999876533
No 419
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.13 E-value=1.7e-06 Score=56.61 Aligned_cols=46 Identities=22% Similarity=0.315 Sum_probs=34.6
Q ss_pred CCcEEEEEcC-----CEeEEEEceeCCCCCEEEEEEEEc-CCCceEEEEEEe
Q psy15979 6 TERRIMETRG-----SRHTLMIRKVVASDFGNYSCEATN-PMGKHRAYLELS 51 (152)
Q Consensus 6 ~~r~~i~~~~-----~~~~L~I~~v~~~D~G~YtC~A~N-~~G~~~~~~~v~ 51 (152)
.+|+.+.... ...+|.|.+++.+|+|.|.|.+.| ..|.....+.|.
T Consensus 62 ~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~ 113 (118)
T 3udw_C 62 SKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLR 113 (118)
T ss_dssp CSSEEETTCCTTSCCCBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCcEEEecccccCCCCCcEEEEeecChHHCeEEEEEEEECCCCCccceEEEE
Confidence 4566664321 166899999999999999999999 788776655554
No 420
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=98.13 E-value=4.6e-06 Score=53.82 Aligned_cols=61 Identities=21% Similarity=0.286 Sum_probs=46.2
Q ss_pred CCCeEEEEEEecCCCCcceEEEEEEECCCCC-C-------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 67 LPNSYNITWMVSSYTPLEEFKIKYRKIPGNE-P-------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 67 ~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~-~-------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
..+++.|+|..+. .++..|.+.|+...... . ...++. |.+++.|.|+|.|.|..|.|.++.
T Consensus 17 t~~Si~lsW~~p~-~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~~G~gp~ss 88 (97)
T 3qht_C 17 TPTSLLISWDASS-SSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYYDLYYSY 88 (97)
T ss_dssp ETTEEEEECCCCC-SSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEETTEEEEC
T ss_pred CCCEEEEEEeCCC-CCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCccCCCCC
Confidence 5689999999764 47899999999865432 1 113444 566999999999999999996543
No 421
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.13 E-value=2.5e-06 Score=62.39 Aligned_cols=42 Identities=31% Similarity=0.390 Sum_probs=32.5
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCc
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPA 57 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~ 57 (152)
..+.|.|.+++.+|+|.|+|.|.|..|.....+.|. ++|.++
T Consensus 180 ~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 180 ADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-------
T ss_pred CceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCC
Confidence 456899999999999999999999999998877765 444443
No 422
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=98.11 E-value=5.5e-06 Score=52.37 Aligned_cols=64 Identities=9% Similarity=0.179 Sum_probs=43.5
Q ss_pred CCCeEEEEEEecC-CCCcceEEEEEEECCCC--CCCcceE---EecCCCeEEEEEEEEcCCCC-CCCCCCccc
Q psy15979 67 LPNSYNITWMVSS-YTPLEEFKIKYRKIPGN--EPSPMSN---QLTGTNQYQNRRLVRKRFDR-GNSTNGGLI 132 (152)
Q Consensus 67 ~~~~~~L~W~~~~-~~pi~~y~~~~r~~~~~--~~~~~~~---~L~~~~~Y~~rV~A~N~~G~-g~~s~~~~~ 132 (152)
...++.|.|..+. ...+..|.++ +. ... .....++ .|.+++.|.|+|.|.|..|. |.+++...+
T Consensus 16 ~~~sv~L~W~~~~~~~~i~~Y~v~-~~-~~~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v 86 (88)
T 1k85_A 16 TTSSITLSWTASTDNVGVTGYDVY-NG-TALATTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSV 86 (88)
T ss_dssp CSSCEEEEEECCSCCSSEEEEEEE-ES-SSEEEEESSSEEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEE
T ss_pred cCCEEEEEECCCCCCCCccEEEEE-EC-CEEEeecCCCEEEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEEE
Confidence 4688999999754 2357889986 32 110 0112344 36669999999999999998 777765543
No 423
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.11 E-value=2.1e-06 Score=69.68 Aligned_cols=43 Identities=33% Similarity=0.349 Sum_probs=35.3
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
.|+.+.. .++|.|.+++.+|+|.|+|+|+|.+|.+++++.|.+
T Consensus 399 ~~~~~~~---~g~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v 441 (452)
T 3zyi_A 399 PRISVLN---DGTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNV 441 (452)
T ss_dssp SSCEECT---TSCEECSSCCTTCCEEEEEEEECSSCEEEEEEEEEC
T ss_pred CCEEECC---CCeEEEeecCHHHCEEEEEEEEcCCCcEEEEEEEEE
Confidence 3555543 346999999999999999999999999999766654
No 424
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.11 E-value=6.2e-06 Score=63.53 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=42.9
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec---CCCCceeec-C-C-CCCCCCeEEEEEEecCCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG---KPNPAIFRS-H-P-QGRLPNSYNITWMVSSYT 81 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~---~P~p~~~~~-~-~-~~~~~~~~~L~W~~~~~~ 81 (152)
.+.|.|.+++.+|+|.|+|.|.|..+.....+.|.. ...+|.+.. . + .......+.|.|.+.+..
T Consensus 177 ~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~ 247 (323)
T 2wqr_A 177 TSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFM 247 (323)
T ss_dssp EEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEB
T ss_pred EEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeee
Confidence 457999999999999999999999765444444432 223333221 1 1 112368899999987643
No 425
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.10 E-value=1.2e-05 Score=58.41 Aligned_cols=65 Identities=20% Similarity=0.232 Sum_probs=49.3
Q ss_pred CCCeEEEEEEecCCCCcceEEEEEEECCCCC--------CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCccc
Q psy15979 67 LPNSYNITWMVSSYTPLEEFKIKYRKIPGNE--------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLI 132 (152)
Q Consensus 67 ~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~--------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~ 132 (152)
+.+++.|+|..+. ..+..|.+.|....... ....++. |.+++.|.|+|.|.|..|.|.+|....+
T Consensus 116 t~~si~l~W~~p~-~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~ 191 (195)
T 2qbw_A 116 TPTSLLISWDASY-YGVSYYRITYGETGGNSPVQEFTVPYSSSTATISGLKPGVDYTITVYAYSDYYGSHHYSPISI 191 (195)
T ss_dssp ETTEEEEECCCCC-SSCSEEEEEEEETTCCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEESSTTSSCBCCCEEE
T ss_pred CCCEEEEEEeCCC-CCccEEEEEEEECCCCCcceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEeCCccCCCCCCEEE
Confidence 4689999999764 46889999998765432 1113444 5669999999999999999998776544
No 426
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.10 E-value=2.6e-06 Score=61.38 Aligned_cols=40 Identities=30% Similarity=0.443 Sum_probs=33.0
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY 47 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~ 47 (152)
.+.++.+... +.|.|.+++.+|+|.|+|.|+|.+|..++.
T Consensus 160 ~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 199 (217)
T 2vr9_A 160 ASSRVRIVDG---GNLLISNVEPIDEGNYKCIAQNLVGTRESS 199 (217)
T ss_dssp CCCSEEEETT---TEEEESSCCSTTCEEEEEEEEETTEEEECC
T ss_pred cCCcEEecCC---CcEEEeeCCHHHCeEEEEEEEcccceeccc
Confidence 3456666533 479999999999999999999999998874
No 427
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.10 E-value=1.8e-06 Score=58.86 Aligned_cols=30 Identities=30% Similarity=0.579 Sum_probs=27.6
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR 45 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~ 45 (152)
..+.|.|.+++.+|+|.|+|.|.|.+|.+.
T Consensus 88 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 88 AASTISIDTLVEEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECCTTSSS
T ss_pred cceEEEECCCCcccCEEEEEEEEecCCccc
Confidence 457899999999999999999999999974
No 428
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.10 E-value=2.6e-06 Score=60.19 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=32.9
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNP 56 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p 56 (152)
...|.|.+++.+|+|.|+|.|.|..|.....+.|. +.|.+
T Consensus 142 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 142 GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp SSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC-
T ss_pred ceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCC
Confidence 46899999999999999999999999988865554 55543
No 429
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.09 E-value=1.9e-05 Score=59.69 Aligned_cols=75 Identities=15% Similarity=0.227 Sum_probs=48.4
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCce-----EEEEEEec-CCCCce-eecCCC--CCCCCeEEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSG-KPNPAI-FRSHPQ--GRLPNSYNIT 74 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~~~v~~-~P~p~~-~~~~~~--~~~~~~~~L~ 74 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..+.. ...+.|.. .+.+|. ....+. ......+.|.
T Consensus 71 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~ 150 (261)
T 2xqy_G 71 KDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 150 (261)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEE
T ss_pred CCcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEE
Confidence 468888643 356789999999999999999999965311 12455554 223333 222221 1235789999
Q ss_pred EEecCC
Q psy15979 75 WMVSSY 80 (152)
Q Consensus 75 W~~~~~ 80 (152)
|.+.+.
T Consensus 151 C~~~g~ 156 (261)
T 2xqy_G 151 CLVKGY 156 (261)
T ss_dssp EEEEEE
T ss_pred EEEEeE
Confidence 998754
No 430
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.06 E-value=4e-06 Score=71.22 Aligned_cols=110 Identities=19% Similarity=0.196 Sum_probs=32.2
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecC--C-CCCCCCeEEEEEEecCCCCcceEEEEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSH--P-QGRLPNSYNITWMVSSYTPLEEFKIKY 90 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~--~-~~~~~~~~~L~W~~~~~~pi~~y~~~~ 90 (152)
..+.|.|.+++.+|+|.|+|.|.|..|.....+.|. .+|........ . .......+.|.|.+.++++ ..+.| +
T Consensus 288 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~-~~v~W-~ 365 (772)
T 3v2a_R 288 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPP-PEIKW-Y 365 (772)
T ss_dssp EEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC--------------------------------------
T ss_pred EEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCC-CeEEE-E
Confidence 356799999999999999999999999877655544 44432111100 0 1123577888998876433 23443 3
Q ss_pred EECCC-CC---C-CcceE-----EecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 91 RKIPG-NE---P-SPMSN-----QLTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 91 r~~~~-~~---~-~~~~~-----~L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
+.... .. . ....+ ...+.+.|.| .|.|..|....+..
T Consensus 366 ~~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y~C--~a~n~~g~~~~s~~ 412 (772)
T 3v2a_R 366 KNGIPLESNHTIKAGHVLTIMEVSERDTGNYTV--ILTNPISKEKQSHV 412 (772)
T ss_dssp -------------------------------------------------
T ss_pred ECCEeCCCCceEccceeEEEecCChhcCceEEE--EEEECCcCeEEEEE
Confidence 22110 00 0 00112 3344788988 67899997765443
No 431
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.06 E-value=6.4e-06 Score=58.96 Aligned_cols=27 Identities=26% Similarity=0.238 Sum_probs=24.9
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMG 42 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (152)
....|.|.+++.+|+|.|+|.|.|..+
T Consensus 155 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 155 SRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred ceeEEEecccCcccCeEEEEEEEeCCC
Confidence 457899999999999999999999876
No 432
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.06 E-value=9.5e-06 Score=61.45 Aligned_cols=37 Identities=16% Similarity=0.141 Sum_probs=31.4
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCC
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG 42 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~g 103 (257)
T 3bn9_D 65 KGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTY 103 (257)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCSS
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCC
Confidence 468888653 4567899999999999999999999876
No 433
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.05 E-value=1.9e-05 Score=58.34 Aligned_cols=75 Identities=13% Similarity=0.244 Sum_probs=46.6
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEE--cCCCc------eEEEEEEec-CCCCceee-cCCC--CCCC-Ce
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEAT--NPMGK------HRAYLELSG-KPNPAIFR-SHPQ--GRLP-NS 70 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~--N~~G~------~~~~~~v~~-~P~p~~~~-~~~~--~~~~-~~ 70 (152)
.+|+.+..+ +...+|+|.+++.+|+|.|.|.+. |..|. ....+.|.. .+.+|... ..+. .... ..
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~ 143 (232)
T 1dn0_B 64 KSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSS 143 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCS
T ss_pred CCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCc
Confidence 478888642 356789999999999999999999 43121 122455554 33333322 1111 1134 78
Q ss_pred EEEEEEecCC
Q psy15979 71 YNITWMVSSY 80 (152)
Q Consensus 71 ~~L~W~~~~~ 80 (152)
+.|.|.+.+.
T Consensus 144 v~L~C~~~g~ 153 (232)
T 1dn0_B 144 VAVGCLAQDF 153 (232)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 9999998765
No 434
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.05 E-value=2.4e-06 Score=55.41 Aligned_cols=44 Identities=25% Similarity=0.403 Sum_probs=32.5
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEE
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLE 49 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~ 49 (152)
.+|+.+.. .....+|.|.+++.+|+|.|.|.+.|..|..+..+.
T Consensus 58 ~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~ 103 (109)
T 2oyp_A 58 SSRYQLKGDLNKGDVSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLE 103 (109)
T ss_dssp CTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEECCSSTTCCEEEE
T ss_pred cceEEEccCccCCcEeEEEccCCChhCeEEEEEEEcCCcccceEEE
Confidence 35666542 223468999999999999999999998766555433
No 435
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=98.05 E-value=9.4e-05 Score=61.35 Aligned_cols=114 Identities=12% Similarity=0.123 Sum_probs=76.4
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe----cCCCCceeecCCCCCCCCeEEEEEEecCC--CCcceEEEEEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS----GKPNPAIFRSHPQGRLPNSYNITWMVSSY--TPLEEFKIKYR 91 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~----~~P~p~~~~~~~~~~~~~~~~L~W~~~~~--~pi~~y~~~~r 91 (152)
....|.++.....-..++.|.|.+|...+.+.+. .+|.||...... .....++.|+|..+.. ..+..|.++|+
T Consensus 342 ~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~~~~~~VkP~PP~nl~v~-~~~stsl~LsW~~P~~~~~~~L~YeVrYr 420 (483)
T 3e0g_A 342 YQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVNITEKVYPHTPTSFKVK-DINSTAVKLSWHLPGNFAKINFLCEIEIK 420 (483)
T ss_dssp EEEEEECCTTCCCEEEEEEEECSSCEEEEEEEECGGGGBCCCCCEEEEEC-CSSSSSCCEEEECCSCCTTSBCCCEEEEE
T ss_pred EEEEEccCCCCcEEEEEEEEEeCCCCcccceEEEeccccCCCCCeeeEEE-EecCCeEEEEECCCCCCCCceEEEEEEEE
Confidence 3466777665555566789999999887764443 567777644321 2246789999998643 34678999999
Q ss_pred ECCCCC-CC--------cc--eE---EecCCCeEEEEEEEEcCCC---CCCCCCCcccc
Q psy15979 92 KIPGNE-PS--------PM--SN---QLTGTNQYQNRRLVRKRFD---RGNSTNGGLIV 133 (152)
Q Consensus 92 ~~~~~~-~~--------~~--~~---~L~~~~~Y~~rV~A~N~~G---~g~~s~~~~~~ 133 (152)
...... .. .. .+ .|.+++.|.|||+|+ ..| ||+.|....+.
T Consensus 421 ~~~~~~~~~~vsv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~ 478 (483)
T 3e0g_A 421 KSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHL 478 (483)
T ss_dssp CSSSCCCEEECCCBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCC
T ss_pred ECCCCCceEEEEEeccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeE
Confidence 875432 00 11 22 466699999999999 556 47877766443
No 436
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=98.05 E-value=6.6e-05 Score=56.28 Aligned_cols=101 Identities=15% Similarity=0.194 Sum_probs=61.4
Q ss_pred CCceEEE---EEEe--cCCCCceeecCCCCCCCCeEEEEEEecCC----CCcceEEEEEEECCC-CCCC-----c--ceE
Q psy15979 41 MGKHRAY---LELS--GKPNPAIFRSHPQGRLPNSYNITWMVSSY----TPLEEFKIKYRKIPG-NEPS-----P--MSN 103 (152)
Q Consensus 41 ~G~~~~~---~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~~~----~pi~~y~~~~r~~~~-~~~~-----~--~~~ 103 (152)
+|...+. +.+. ++|.||.............+.|+|..+.. .....|.++|+.... ..+. . ..+
T Consensus 95 lG~~~S~~~~f~l~~iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~~~t~~~i 174 (223)
T 3up1_A 95 VGEKSLTCKKIDLTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNLSSTKLTL 174 (223)
T ss_dssp ETTEEEEEEEEEGGGSBCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEESSSEEEE
T ss_pred cCCceeccEEEEecceEEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEecCceeEE
Confidence 5665552 3332 67888875432111224678999998632 225789999998742 2221 1 123
Q ss_pred ---EecCCCeEEEEEEEEcC-C---CCCCCCCCccc-cccccc-ccc
Q psy15979 104 ---QLTGTNQYQNRRLVRKR-F---DRGNSTNGGLI-VPKAKR-EGR 141 (152)
Q Consensus 104 ---~L~~~~~Y~~rV~A~N~-~---G~g~~s~~~~~-~~~~~~-~~~ 141 (152)
.|.+++.|+|+|+|+.. . +||+.|....+ ++.+++ .|+
T Consensus 175 ~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~P~~g~ 221 (223)
T 3up1_A 175 LQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEINNSSGE 221 (223)
T ss_dssp EGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC-----
T ss_pred eccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCCCCcCC
Confidence 46679999999999985 2 48888887754 556666 554
No 437
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.05 E-value=2.9e-06 Score=53.71 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=26.5
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR 45 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~ 45 (152)
.+.|.|.+++.+|+|.|+|.|.|..|...
T Consensus 49 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 77 (91)
T 3bfo_A 49 KKLYMVPYVDLEHQGTYWCHVYNDRDSQD 77 (91)
T ss_dssp SSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCeEEECCCCHHhCEEEEEEEEcCCCCEE
Confidence 45899999999999999999999999765
No 438
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=98.05 E-value=1.9e-05 Score=57.06 Aligned_cols=62 Identities=23% Similarity=0.358 Sum_probs=46.3
Q ss_pred CCCeEEEEEEecC--CCCcceEEEEEEECCCC-CC-------------------CcceE---EecCCCeEEEEEEEEcCC
Q psy15979 67 LPNSYNITWMVSS--YTPLEEFKIKYRKIPGN-EP-------------------SPMSN---QLTGTNQYQNRRLVRKRF 121 (152)
Q Consensus 67 ~~~~~~L~W~~~~--~~pi~~y~~~~r~~~~~-~~-------------------~~~~~---~L~~~~~Y~~rV~A~N~~ 121 (152)
..+++.|+|..+. +.++..|.|+|+..+.. .+ ....+ .|.+++.|+|||.|.|..
T Consensus 14 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 93 (214)
T 2ibg_A 14 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSN 93 (214)
T ss_dssp ETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEEEEEEEEEETT
T ss_pred cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEEEEEEEEEecC
Confidence 5689999999753 36899999999986431 10 11233 356699999999999999
Q ss_pred CCCCCCC
Q psy15979 122 DRGNSTN 128 (152)
Q Consensus 122 G~g~~s~ 128 (152)
|.|.++.
T Consensus 94 g~~~~s~ 100 (214)
T 2ibg_A 94 NDNKESN 100 (214)
T ss_dssp SCEEECC
T ss_pred CCCCCCC
Confidence 9987765
No 439
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.04 E-value=2.2e-05 Score=57.84 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=29.3
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 101 (230)
T 1ypz_F 65 YKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEG 101 (230)
T ss_dssp SSEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECCT
T ss_pred CCeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEECC
Confidence 578888643 25678999999999999999999985
No 440
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.04 E-value=2.7e-05 Score=50.85 Aligned_cols=60 Identities=10% Similarity=0.150 Sum_probs=44.7
Q ss_pred CCCeEEEEEEecCCCCcceEEEEEEECCCCCC--------CcceEE---ecCCCeEEEEEEEEcCCCCCCCCC
Q psy15979 67 LPNSYNITWMVSSYTPLEEFKIKYRKIPGNEP--------SPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTN 128 (152)
Q Consensus 67 ~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~~--------~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~ 128 (152)
..+++.|+|..+.. +..|.|.|+......+ ...++. |.+++.|.|+|.|.|..|.|+|..
T Consensus 21 ~~~sv~lsW~~p~~--~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~ 91 (104)
T 2dkm_A 21 TPRTVHLTWQPSAG--ATHYLVRCSPASPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSLRGPEGSEARG 91 (104)
T ss_dssp CSSEEEEECCCCSS--CSEEEEEEEESSSCCSSCCEEEEESSSEEEEESCCTTCCEEEEEEEECSSSBCCCEE
T ss_pred CCCEEEEEEeCCCC--CCeEEEEEEECCCCCCcceEEEecCCCEEEECCCCCCCEEEEEEEEECCCCCCCCEE
Confidence 46899999987654 3889999987654211 012443 566999999999999999988763
No 441
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.03 E-value=5.7e-06 Score=54.15 Aligned_cols=43 Identities=16% Similarity=0.224 Sum_probs=34.0
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
+|+.+.. .+.+|.|.+++.+|+|.|.|.+.|..|.....+.+.
T Consensus 60 ~r~~~~~--~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~~ 102 (110)
T 1ncn_A 60 GRTSFDS--DSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQM 102 (110)
T ss_dssp TSEEEET--TTTEEEECSCCGGGCEEEEEEEEEECSSSEEEEEEE
T ss_pred CcEEEEC--CCEEEEEcCCChHHCEEEEEEEEcCCCCceEEEEEE
Confidence 4666642 346899999999999999999999988877655443
No 442
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=98.03 E-value=0.00021 Score=54.02 Aligned_cols=106 Identities=11% Similarity=0.016 Sum_probs=67.2
Q ss_pred CCCEEEEEEEEcCCCceEEE-EEE--e--cCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCCCC---
Q psy15979 28 SDFGNYSCEATNPMGKHRAY-LEL--S--GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNEPS--- 99 (152)
Q Consensus 28 ~D~G~YtC~A~N~~G~~~~~-~~v--~--~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~~~--- 99 (152)
.....|+-.+.|..|..... ..+ . ++|.||...... ......+.|+|..+.....+.|.|+|+......+.
T Consensus 106 ~~~~~y~i~V~~~~g~~~s~~~~~~~~~iVkP~PP~nl~v~-~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~ 184 (247)
T 2erj_C 106 HLYQTFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLH-KLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS 184 (247)
T ss_dssp CTTSCEEEEEECSSCTTCEEEEEECGGGSEECCCCEEEEEE-ESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEE
T ss_pred ceeeEEEEEEEECCCccccceEEEchhHeEEeCCCCeEEEE-ECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEe
Confidence 34456776677777765442 222 2 468887644211 11236899999987533446899999986543322
Q ss_pred ---cceE---EecCCCeEEEEEEEEcCCC------CCCCCCCccccc
Q psy15979 100 ---PMSN---QLTGTNQYQNRRLVRKRFD------RGNSTNGGLIVP 134 (152)
Q Consensus 100 ---~~~~---~L~~~~~Y~~rV~A~N~~G------~g~~s~~~~~~~ 134 (152)
...+ .|.+++.|+|||+|+...| ||+.|....+..
T Consensus 185 ~~~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t 231 (247)
T 2erj_C 185 VDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS 231 (247)
T ss_dssp ECSSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC
T ss_pred cCCceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEEC
Confidence 1233 3566999999999999653 777777765543
No 443
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.02 E-value=2.8e-05 Score=57.05 Aligned_cols=75 Identities=17% Similarity=0.272 Sum_probs=47.1
Q ss_pred CcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCC-----------CceEEEEEEe-cCCCCceee-cCCC--CCCCC
Q psy15979 7 ERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM-----------GKHRAYLELS-GKPNPAIFR-SHPQ--GRLPN 69 (152)
Q Consensus 7 ~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~-----------G~~~~~~~v~-~~P~p~~~~-~~~~--~~~~~ 69 (152)
+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|.. |.. ..+.|. ..+.+|.+. ..+. .....
T Consensus 70 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~-~~l~V~~~~~~~P~v~~~~~~~~~~~g~ 148 (232)
T 3qhz_H 70 TRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRG-TLVTVSSASTKGPSVFPLAPSSKSTSGG 148 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCC-EEEEECSSCCBCCEEEEECC-------C
T ss_pred CceEEEeccCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCC-eEEEEecCCCCCCEEEEecccccccCCC
Confidence 68887643 366789999999999999999999863 221 234454 233333333 2221 12357
Q ss_pred eEEEEEEecCCCC
Q psy15979 70 SYNITWMVSSYTP 82 (152)
Q Consensus 70 ~~~L~W~~~~~~p 82 (152)
.+.|.|.+.+..|
T Consensus 149 ~v~L~C~~~~~~P 161 (232)
T 3qhz_H 149 TAALGCLVKDYFP 161 (232)
T ss_dssp EEEEEEEEEEEBS
T ss_pred cEEEEEEEeeEeC
Confidence 8999999876434
No 444
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.02 E-value=5.1e-06 Score=60.63 Aligned_cols=38 Identities=13% Similarity=-0.023 Sum_probs=27.8
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
+....+.+.+++.+|+|+|+|+|+|.+|..+.++.|..
T Consensus 174 g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v 211 (226)
T 4f80_A 174 GLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211 (226)
T ss_dssp SCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECC
T ss_pred CcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEE
Confidence 33455667789999999999999999999999877764
No 445
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=98.02 E-value=3.7e-05 Score=61.46 Aligned_cols=99 Identities=11% Similarity=0.006 Sum_probs=49.4
Q ss_pred CCEEEEEEEEcCCCceEEEEEEecCCCCceeecCCCCCCCCeEEEEEEecCC-----CCcceEEEEEEECCCCCCCc---
Q psy15979 29 DFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY-----TPLEEFKIKYRKIPGNEPSP--- 100 (152)
Q Consensus 29 D~G~YtC~A~N~~G~~~~~~~v~~~P~p~~~~~~~~~~~~~~~~L~W~~~~~-----~pi~~y~~~~r~~~~~~~~~--- 100 (152)
..+.++-.+.|.+|.+.+.-+ ...|.||............++.|+|.++.. ..+..|.++|+..+...+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~~~~ 86 (380)
T 3lb6_C 8 VGCLYTFLISTTFGCTSSSDT-EIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIIT 86 (380)
T ss_dssp ------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEEEEE
T ss_pred hhhhhhheeecccccccCCcc-cccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceEEEe
Confidence 456778889999997755322 234566554321111125889999998543 24789999999876433221
Q ss_pred ----ceEEecCCCeEEEEEEEEcC----CCCCCCCC
Q psy15979 101 ----MSNQLTGTNQYQNRRLVRKR----FDRGNSTN 128 (152)
Q Consensus 101 ----~~~~L~~~~~Y~~rV~A~N~----~G~g~~s~ 128 (152)
....+.....|+|||.|.|. .|.|+++.
T Consensus 87 ~~~~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~ 122 (380)
T 3lb6_C 87 KNLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSS 122 (380)
T ss_dssp SSSEEEEECCTTSCEEEEEEEECCHHHHSSSCCBCC
T ss_pred ccEEEEEeecCCCceEEEEEeecCCcccCCccCccc
Confidence 12234448999999999987 88888774
No 446
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.02 E-value=1e-05 Score=58.41 Aligned_cols=39 Identities=26% Similarity=0.311 Sum_probs=32.9
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecC
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
+..+.|.|.+++.+|+|.|+|+|.|.+|.....+.|...
T Consensus 167 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 167 GLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTIT 205 (222)
T ss_dssp SCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred CeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEe
Confidence 334568999999999999999999999999987666643
No 447
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.01 E-value=3.5e-06 Score=55.76 Aligned_cols=51 Identities=25% Similarity=0.301 Sum_probs=37.3
Q ss_pred CCcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEecCCCC
Q psy15979 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNP 56 (152)
Q Consensus 6 ~~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~~P~p 56 (152)
.+|+.+.. .....+|+|.+++.+|+|.|.|.+.+........+.|.+.|.+
T Consensus 60 ~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~~ 112 (115)
T 2or7_A 60 NSRYQLKGNISEGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLEVKPEL 112 (115)
T ss_dssp STTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCTTSCEEEEEEEEEESCC
T ss_pred CccEEEecCccCCeEEEEEccCCHHHCEEEEEEEECCCceeEEEEEEEEcCCC
Confidence 45776642 2345679999999999999999999876555666777665543
No 448
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.00 E-value=4.7e-06 Score=59.23 Aligned_cols=35 Identities=6% Similarity=0.018 Sum_probs=29.9
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
.+.|.|.++..+|+|.|+|+|+|..|..+..+.+.
T Consensus 174 ~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~ 208 (218)
T 4frw_A 174 TSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHI 208 (218)
T ss_dssp EEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred EEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEE
Confidence 45799999999999999999999999887655443
No 449
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.00 E-value=5.9e-06 Score=52.75 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=26.2
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEE
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (152)
....|.|.+++.+|+|.|+|.|.|..|....
T Consensus 55 ~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~ 85 (96)
T 2ens_A 55 PSPVLILPEIGPQDQGTYSCVATHSSHGPQE 85 (96)
T ss_dssp CCSEEEEESCCTTTCEEEECEECCSSCCCEE
T ss_pred CCCEEEECCCCcccCEEEEEEEEeCCCCcEE
Confidence 3568999999999999999999997665443
No 450
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.00 E-value=7.8e-06 Score=54.65 Aligned_cols=48 Identities=19% Similarity=0.242 Sum_probs=33.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEE-cCCCceEEEEEE--ecCCCC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEAT-NPMGKHRAYLEL--SGKPNP 56 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~-N~~G~~~~~~~v--~~~P~p 56 (152)
.+|+.+. .+.+|+|.+++.+|+|.|+|.+. +..|..+..+.| ..+|.|
T Consensus 62 ~~R~~~~---~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 62 KDRVAPG---PGLGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEVLESSVA 112 (117)
T ss_dssp TTTEEEC---STTCEEECSCCGGGCEEEEEEEEEETTCCEEEEEEEEEECC---
T ss_pred cCcEEeC---CceEEEEeeCChhhCEEEEEEEEECCCCCeEEEEEEEEEccCcc
Confidence 3577763 24589999999999999999864 567887775444 455544
No 451
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.00 E-value=5.7e-06 Score=54.61 Aligned_cols=37 Identities=32% Similarity=0.403 Sum_probs=30.8
Q ss_pred CCcEEEEE---cCCEeEEEEceeCCCCCEEEEEEEEcCCC
Q psy15979 6 TERRIMET---RGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (152)
Q Consensus 6 ~~r~~i~~---~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (152)
++|+.+.. .....+|.|.+++.+|+|.|.|.+.|..|
T Consensus 56 ~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 56 NGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAAEASSG 95 (113)
T ss_dssp ETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEEECSSS
T ss_pred CCceEEEEccCCCCEEEEEECCCChhhCEEEEEEEecCCC
Confidence 46777754 34667899999999999999999999876
No 452
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.00 E-value=3e-05 Score=62.12 Aligned_cols=75 Identities=16% Similarity=0.267 Sum_probs=49.9
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCCCce-----EEEEEEec-CCC-CceeecCC--CCCCCCeEEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSG-KPN-PAIFRSHP--QGRLPNSYNIT 74 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~~~v~~-~P~-p~~~~~~~--~~~~~~~~~L~ 74 (152)
.+|+.+..+ +...+|.|.+++.+|+|.|.|.|.|..|.. ...+.|.. .+. |..+...+ .......+.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 144 (444)
T 1igt_B 65 KGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 144 (444)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEE
Confidence 368888643 456789999999999999999999987652 12345543 222 33332221 11346789999
Q ss_pred EEecCC
Q psy15979 75 WMVSSY 80 (152)
Q Consensus 75 W~~~~~ 80 (152)
|.+.+.
T Consensus 145 C~~~g~ 150 (444)
T 1igt_B 145 CLVKGY 150 (444)
T ss_dssp EEEEEE
T ss_pred EEEcce
Confidence 998764
No 453
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.00 E-value=3.9e-06 Score=59.33 Aligned_cols=37 Identities=32% Similarity=0.379 Sum_probs=32.5
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
....|.|.+++.+|+|.|+|.|.|.+|.....+.|.+
T Consensus 163 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 199 (201)
T 3s97_C 163 SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEE
Confidence 3468999999999999999999999999988776653
No 454
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.00 E-value=3.4e-06 Score=60.26 Aligned_cols=29 Identities=38% Similarity=0.582 Sum_probs=26.8
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (152)
+.|.|.+++.+|+|.|+|.|.|.+|...+
T Consensus 165 ~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s 193 (212)
T 2v9r_A 165 GKLMITYTRKSDAGKYVCVGTNMVGERES 193 (212)
T ss_dssp TEEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CeEEEeeCCHhhCeeEEEEEecccCceec
Confidence 47999999999999999999999998765
No 455
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=97.99 E-value=5.7e-05 Score=55.87 Aligned_cols=82 Identities=9% Similarity=0.035 Sum_probs=52.8
Q ss_pred cCCCCceeecCCCCCCCCeEEEEEEecCCC---CcceEEEEEEECCCCCCC--------cceE---EecCCCeEEEEEEE
Q psy15979 52 GKPNPAIFRSHPQGRLPNSYNITWMVSSYT---PLEEFKIKYRKIPGNEPS--------PMSN---QLTGTNQYQNRRLV 117 (152)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~---pi~~y~~~~r~~~~~~~~--------~~~~---~L~~~~~Y~~rV~A 117 (152)
++|.||.............+.|+|..+... .+..|.++|+......+. ...+ .|.+++.|.|+|+|
T Consensus 120 v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa 199 (227)
T 1eer_B 120 VLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRA 199 (227)
T ss_dssp EECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEEECTTCCEEEECCCCSSCEEEEEEEE
T ss_pred EccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEEEecCceEEEEcccCCCCeEEEEEEE
Confidence 457777644321111367899999986432 257899999976543221 1233 35669999999999
Q ss_pred EcC----CC-CCCCCCCcccc
Q psy15979 118 RKR----FD-RGNSTNGGLIV 133 (152)
Q Consensus 118 ~N~----~G-~g~~s~~~~~~ 133 (152)
++. .| ||+.|....+.
T Consensus 200 ~~~~~~~~g~wS~WS~~~~~~ 220 (227)
T 1eer_B 200 RMAEPSFGGFWSEWSEPVSLL 220 (227)
T ss_dssp EECTTTCCEECCCCCCCEEEE
T ss_pred eECCCCCCCcCCCCCCCEEEE
Confidence 975 23 68888776543
No 456
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=97.99 E-value=2.6e-06 Score=60.80 Aligned_cols=37 Identities=27% Similarity=0.391 Sum_probs=30.5
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCceEE--EEEEe
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELS 51 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~~~v~ 51 (152)
...+.|.|.+++.+|+|.|+|.|.|.+|.... .+.|.
T Consensus 166 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~ 204 (212)
T 1f97_A 166 PKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD 204 (212)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEE
T ss_pred CCCceEEEEecChhhCcEEEEEEccccCCccccceEEEE
Confidence 34568999999999999999999999999833 34444
No 457
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=97.99 E-value=5e-06 Score=63.25 Aligned_cols=37 Identities=24% Similarity=0.290 Sum_probs=33.5
Q ss_pred EeEEEEceeCCCC-CEEEEEEEEcCCCceEEEEEEecC
Q psy15979 17 RHTLMIRKVVASD-FGNYSCEATNPMGKHRAYLELSGK 53 (152)
Q Consensus 17 ~~~L~I~~v~~~D-~G~YtC~A~N~~G~~~~~~~v~~~ 53 (152)
.+.|.|.+++.+| +|.|+|.|.|.+|.+.+.+.|..+
T Consensus 276 ~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 276 ITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred EEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 4589999999999 999999999999999998887653
No 458
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=97.99 E-value=8.8e-06 Score=58.96 Aligned_cols=63 Identities=13% Similarity=0.219 Sum_probs=42.4
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCce--EEEEEEe-cCCCCceeecCCC---CCCCCeEEEEEEecCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELS-GKPNPAIFRSHPQ---GRLPNSYNITWMVSSY 80 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~~~v~-~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~ 80 (152)
+.|.|.+++.+|+|.|+|.|.|..|.. +..+.+. ....||.+...+. ......+.|.|.+.+.
T Consensus 68 ~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~ 136 (207)
T 2vol_A 68 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDF 136 (207)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEE
T ss_pred EEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeE
Confidence 579999999999999999999999964 3344331 2233443322111 1135789999998764
No 459
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=97.99 E-value=1.5e-05 Score=58.62 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=46.7
Q ss_pred CcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCC----Cce--EEEEEEec---CCCCce-eecCCCC---CCCCeEE
Q psy15979 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPM----GKH--RAYLELSG---KPNPAI-FRSHPQG---RLPNSYN 72 (152)
Q Consensus 7 ~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~----G~~--~~~~~v~~---~P~p~~-~~~~~~~---~~~~~~~ 72 (152)
+|+.+.. .....+|.|.+++.+|+|.|.|.+.|.. +.. ...+.|.. .+.+|. ....+.. .....+.
T Consensus 64 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~ 143 (245)
T 4ei6_B 64 DQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 143 (245)
T ss_dssp TTEEEECCTTSCEEEEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CCEEEEeccCceEEEEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceE
Confidence 7888864 2456789999999999999999999632 111 11344443 222333 2222111 1247889
Q ss_pred EEEEecCCCC
Q psy15979 73 ITWMVSSYTP 82 (152)
Q Consensus 73 L~W~~~~~~p 82 (152)
|.|.+.+..|
T Consensus 144 l~C~~~g~~p 153 (245)
T 4ei6_B 144 LVCLATGFYP 153 (245)
T ss_dssp EEEEEEEEBS
T ss_pred EEEEEeeEeC
Confidence 9999876433
No 460
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=97.97 E-value=7.4e-06 Score=57.71 Aligned_cols=40 Identities=25% Similarity=0.338 Sum_probs=32.4
Q ss_pred CCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE
Q psy15979 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY 47 (152)
Q Consensus 5 ~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~ 47 (152)
.+.|+.+..+ +.|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 141 ~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~ 180 (189)
T 2v44_A 141 SDNRFAMLAN---NNLQILNINKSDEGIYRCEGRVEARGEIDF 180 (189)
T ss_dssp CCTTEEECTT---SCEEETTCCGGGCEEEEEEEEETTTTEEEE
T ss_pred CCCCEEEecC---CcEEEEEcCcccCeEEEEEEEccccCceee
Confidence 3567776533 479999999999999999999999876653
No 461
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=97.97 E-value=5e-06 Score=59.98 Aligned_cols=42 Identities=29% Similarity=0.421 Sum_probs=32.9
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEE-EEEe
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LELS 51 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-~~v~ 51 (152)
+.++.+. .+.|.|.+++.+|+|.|+|+|.|.+|...+. +.|.
T Consensus 155 ~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~ 197 (212)
T 2yd1_A 155 NPRYSLK----DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLY 197 (212)
T ss_dssp STTEEEE----TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred CCeEEcc----CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEE
Confidence 4556553 2389999999999999999999999998753 3443
No 462
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=97.96 E-value=4.4e-05 Score=56.11 Aligned_cols=77 Identities=14% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCC-----CceE-----EEEEEecC-CCCceee-cCCC--CCCCC
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM-----GKHR-----AYLELSGK-PNPAIFR-SHPQ--GRLPN 69 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~-----G~~~-----~~~~v~~~-P~p~~~~-~~~~--~~~~~ 69 (152)
.+|+.+..+ ....+|.|.+++.+|+|.|.|.+.|.. +... ..+.|... +.+|.+. ..+. .....
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~ 144 (230)
T 3n9g_H 65 QGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGG 144 (230)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTC
T ss_pred CCcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCC
Confidence 368887643 356779999999999999999999864 2111 13445422 2333332 2221 12457
Q ss_pred eEEEEEEecCCCC
Q psy15979 70 SYNITWMVSSYTP 82 (152)
Q Consensus 70 ~~~L~W~~~~~~p 82 (152)
.+.|.|.+.+..|
T Consensus 145 ~v~L~C~~~~~~P 157 (230)
T 3n9g_H 145 TAALGCLVKDYFP 157 (230)
T ss_dssp EEEEEEEEEEEBS
T ss_pred CEEEEEEEEeEEC
Confidence 8999999876433
No 463
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=97.96 E-value=6.8e-06 Score=53.96 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
.+|+.+...+...+|+|.+++.+|+|.|.|.+.|.
T Consensus 61 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 61 PSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDN 95 (109)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCcEEEeccCCEEEEEECCCChhhCEEEEEEEeeC
Confidence 46888876667789999999999999999999984
No 464
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=97.96 E-value=2.9e-05 Score=57.01 Aligned_cols=74 Identities=11% Similarity=0.174 Sum_probs=46.0
Q ss_pred CcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCc-----eEEEEEEec---CCCCceee-cCCCC---CCCCeEEE
Q psy15979 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGK-----HRAYLELSG---KPNPAIFR-SHPQG---RLPNSYNI 73 (152)
Q Consensus 7 ~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~-----~~~~~~v~~---~P~p~~~~-~~~~~---~~~~~~~L 73 (152)
+|+.+.. .....+|.|.+++.+|+|.|.|.+.+..+. ....+.|.. .+.+|.+. ..+.. .....+.|
T Consensus 63 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L 142 (240)
T 3q5y_A 63 SRFSVQQFDDYHSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATL 142 (240)
T ss_dssp TTEEEEECTTSCEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEE
T ss_pred CeEEEEeCCCCEEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEE
Confidence 6887765 345778999999999999999999843111 112344443 22333332 22111 11478999
Q ss_pred EEEecCC
Q psy15979 74 TWMVSSY 80 (152)
Q Consensus 74 ~W~~~~~ 80 (152)
.|.+.+.
T Consensus 143 ~C~~~g~ 149 (240)
T 3q5y_A 143 VCLARGF 149 (240)
T ss_dssp EEEEEEE
T ss_pred EEEEeeE
Confidence 9998764
No 465
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=97.95 E-value=5.9e-06 Score=61.77 Aligned_cols=68 Identities=13% Similarity=0.070 Sum_probs=48.1
Q ss_pred CCCCeEEEEEEecCC-CCcceEEEEEEECCCCC--CCcceEE---ecCCCeEEEEEEEEcCCCCCCCCCCcccc
Q psy15979 66 RLPNSYNITWMVSSY-TPLEEFKIKYRKIPGNE--PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNSTNGGLIV 133 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~-~pi~~y~~~~r~~~~~~--~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~s~~~~~~ 133 (152)
.+..++.|+|..+.. .-|..|++.+....... ....+|. |.+.|.|.|+|.|.|+.|.+.+.++..+.
T Consensus 162 VT~tSVtLsW~aP~~~~GI~gY~ly~~g~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVr 235 (238)
T 2w1n_A 162 INKKNVTVTWTEPETTEGLEGYILYKDGKKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLR 235 (238)
T ss_dssp ECSSCEEEEEECCSCCTTEEEEEEEETTEEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEE
T ss_pred ccCCeEEEEecCCCCCCCceeEEEEeCCceeEEeeccceEEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEE
Confidence 467999999998643 23889999774321111 1125665 44599999999999999999888555443
No 466
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=97.95 E-value=2.8e-05 Score=57.96 Aligned_cols=76 Identities=12% Similarity=0.230 Sum_probs=48.1
Q ss_pred CCcEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCC------CceEEEEEEec---CCCCceeecC-CCC---CCCCeE
Q psy15979 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPM------GKHRAYLELSG---KPNPAIFRSH-PQG---RLPNSY 71 (152)
Q Consensus 6 ~~r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~------G~~~~~~~v~~---~P~p~~~~~~-~~~---~~~~~~ 71 (152)
.+|+.+.. .....+|.|.+++.+|+|.|.|.+.|.. |.. ..+.|.. .+.||.+... +.. .....+
T Consensus 63 ~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~-~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~ 141 (252)
T 1oga_E 63 AEGYSVSREKKESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPG-TRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKA 141 (252)
T ss_dssp CTTEEECCSSTTBCCEEECSCCSCCCEEEEEEEESSTTSCCEECCC-EEEEEESCGGGCBCCEEEEECCCHHHHHHHSEE
T ss_pred CCcEEEEecCCCEEEEEECcCChhhCEEEEEEEecCCccceeECCC-EEEEEecccCCCCCCeEEEECCChhhhccCCce
Confidence 36787753 2346789999999999999999999962 222 2345543 2344444321 211 024678
Q ss_pred EEEEEecCCCC
Q psy15979 72 NITWMVSSYTP 82 (152)
Q Consensus 72 ~L~W~~~~~~p 82 (152)
.|.|.+.+..|
T Consensus 142 ~L~C~~~g~~P 152 (252)
T 1oga_E 142 TLVCLATGFYP 152 (252)
T ss_dssp EEEEEEEEEBS
T ss_pred EEEEEEeeEcC
Confidence 99999876433
No 467
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=97.95 E-value=2.4e-05 Score=58.38 Aligned_cols=75 Identities=15% Similarity=0.212 Sum_probs=47.2
Q ss_pred CCcEEEEEc--CCEeEEEEceeCCCCCEEEEEEEEcCC----Cce--EEEEEEe-cCCCCceee-cCCC--CCCCCeEEE
Q psy15979 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM----GKH--RAYLELS-GKPNPAIFR-SHPQ--GRLPNSYNI 73 (152)
Q Consensus 6 ~~r~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~----G~~--~~~~~v~-~~P~p~~~~-~~~~--~~~~~~~~L 73 (152)
.+|+.+..+ ....+|+|.+++.+|+|.|.|.+.|.. +.. ...+.|. ..+.+|.+. ..+. ......+.|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 144 (253)
T 3liz_H 65 KGRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTL 144 (253)
T ss_dssp TTTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEE
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEE
Confidence 367877642 356779999999999999999999862 211 1245554 333344333 2111 123678999
Q ss_pred EEEecCC
Q psy15979 74 TWMVSSY 80 (152)
Q Consensus 74 ~W~~~~~ 80 (152)
.|.+.+.
T Consensus 145 ~C~~~g~ 151 (253)
T 3liz_H 145 GCLVKGY 151 (253)
T ss_dssp EEEEEEE
T ss_pred EEEEeeE
Confidence 9998763
No 468
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=97.95 E-value=5.9e-05 Score=53.35 Aligned_cols=73 Identities=12% Similarity=0.244 Sum_probs=47.6
Q ss_pred CCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEEEEEECCCCC-----C-CcceE---EecCCCeEEEEEEEEcCCCC
Q psy15979 53 KPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNE-----P-SPMSN---QLTGTNQYQNRRLVRKRFDR 123 (152)
Q Consensus 53 ~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~~-----~-~~~~~---~L~~~~~Y~~rV~A~N~~G~ 123 (152)
.|.||..... .....+++.|+|..+. .++..|.++|+...... . ....+ .|.+++.|.|+|.|.|..|.
T Consensus 6 ~p~~P~~l~~-~~~~~~sv~l~W~~p~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~~~ 83 (186)
T 1qr4_A 6 DLDNPKDLEV-SDPTETTLSLRWRRPV-AKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRHK 83 (186)
T ss_dssp --CCCEEEEE-ESCCSSEEEEEEECCS-SCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSCB
T ss_pred CCcCCCceEE-EecCCCEEEEEEeCCC-CCccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcCCcc
Confidence 4555543311 1335689999999864 37889999998543211 1 11333 46669999999999998777
Q ss_pred CCCC
Q psy15979 124 GNST 127 (152)
Q Consensus 124 g~~s 127 (152)
|.+.
T Consensus 84 s~~~ 87 (186)
T 1qr4_A 84 SKPT 87 (186)
T ss_dssp CCCE
T ss_pred CCCE
Confidence 7653
No 469
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=97.94 E-value=5.1e-06 Score=56.02 Aligned_cols=43 Identities=23% Similarity=0.284 Sum_probs=32.1
Q ss_pred CcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcC-----CCceEEEEEE
Q psy15979 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP-----MGKHRAYLEL 50 (152)
Q Consensus 7 ~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~-----~G~~~~~~~v 50 (152)
+|+.+.. ....+|.|.+++.+|+|.|.|.+.|. +|.+...+.|
T Consensus 82 ~R~~~~~-~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L 129 (135)
T 1xt5_A 82 GRASVAN-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVL 129 (135)
T ss_dssp TTEEESC-TTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEE
T ss_pred CcEEEec-CCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEE
Confidence 6777643 23567999999999999999999995 4444455444
No 470
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.94 E-value=1e-05 Score=60.20 Aligned_cols=38 Identities=26% Similarity=0.300 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCc
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (152)
.+|+.+...+...+|+|.+++.+|+|.|.|.|.|..+.
T Consensus 195 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~ 232 (253)
T 3uzq_A 195 PARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPW 232 (253)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSC
T ss_pred CCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCc
Confidence 36787776677889999999999999999999996543
No 471
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=97.94 E-value=2.8e-06 Score=56.10 Aligned_cols=23 Identities=30% Similarity=0.482 Sum_probs=21.2
Q ss_pred eeCCCCCEEEEEEEEcCCCceEE
Q psy15979 24 KVVASDFGNYSCEATNPMGKHRA 46 (152)
Q Consensus 24 ~v~~~D~G~YtC~A~N~~G~~~~ 46 (152)
+++.+|+|.|+|.|+|.+|.+.+
T Consensus 78 ~v~~~D~G~Y~C~a~N~~G~~~s 100 (117)
T 2v9t_A 78 RKSRPDEGVYVCVARNYLGEAVS 100 (117)
T ss_dssp TTBCSSCEEEEEEEEETTEEEEC
T ss_pred CCCcCcCEEEEEEEEeCccceEe
Confidence 56899999999999999999876
No 472
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=97.93 E-value=6.2e-05 Score=62.33 Aligned_cols=112 Identities=7% Similarity=0.087 Sum_probs=75.5
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEE-----EEEE---ecCC-CCceeecCC---CCCCCCeEEEEEEe----cCCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRA-----YLEL---SGKP-NPAIFRSHP---QGRLPNSYNITWMV----SSYT 81 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-----~~~v---~~~P-~p~~~~~~~---~~~~~~~~~L~W~~----~~~~ 81 (152)
..+.|.++.+.-.-.+..+|.|..|...- .+.+ ...| .||..+... ......++.|.|.. +...
T Consensus 259 ~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g 338 (589)
T 3l5h_A 259 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANG 338 (589)
T ss_dssp SEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSS
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccC
Confidence 56788999888888899999999875321 1111 1334 344433211 13346899999985 2346
Q ss_pred CcceEEEEEEECCCCCC-----CcceEEecCCCeEEEEEEEEcCCCCCCCCCC
Q psy15979 82 PLEEFKIKYRKIPGNEP-----SPMSNQLTGTNQYQNRRLVRKRFDRGNSTNG 129 (152)
Q Consensus 82 pi~~y~~~~r~~~~~~~-----~~~~~~L~~~~~Y~~rV~A~N~~G~g~~s~~ 129 (152)
+|..|.+.|+....... ......|.+++.|.|+|.|.|..|.|.++..
T Consensus 339 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~~~V~A~n~~G~~~~s~~ 391 (589)
T 3l5h_A 339 KILDYEVTLTRWKSHLQNYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVL 391 (589)
T ss_dssp CCCEEEEEECCTTSCCCBCCCSSSCCEECCCSSCCCEEEEEEBTTBCCCCCCC
T ss_pred ceeeEEEEEecCCCCceeeccCCceEEEEeCCCCEEEEEEEEeCCccCCCeEE
Confidence 88999999976543221 1111236779999999999999999988753
No 473
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=97.93 E-value=8.2e-06 Score=53.37 Aligned_cols=35 Identities=20% Similarity=0.386 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
.+|+.+...+...+|+|.+++.+|+|.|.|.+.|.
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 59 PSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFN 93 (107)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCEEEEccCCEEEEEECCCCHHHCEEEEEEEeeC
Confidence 46888876667788999999999999999999985
No 474
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=97.92 E-value=8.9e-06 Score=53.49 Aligned_cols=35 Identities=31% Similarity=0.383 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
.+|+.+...+...+|+|.+++.+|+|.|.|.+.|.
T Consensus 63 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 63 PVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNE 97 (111)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCcEEEEccCCEEEEEECCCCcccCEEEEEEEecC
Confidence 46888876667788999999999999999999985
No 475
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.92 E-value=1.3e-06 Score=74.16 Aligned_cols=53 Identities=23% Similarity=0.371 Sum_probs=0.0
Q ss_pred cccCCCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCC
Q psy15979 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNP 56 (152)
Q Consensus 2 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p 56 (152)
+|..+.++.+. ...++|.|.+++.+|+|.|+|+|.|.+|.+++++.|. ++|..
T Consensus 706 ~l~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~ 760 (772)
T 3v2a_R 706 TLVEDSGIVLK--DGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEK 760 (772)
T ss_dssp ---------------------------------------------------------
T ss_pred ECcCCCCeEEc--CCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCc
Confidence 34455566554 2357899999999999999999999999999875555 55554
No 476
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.92 E-value=8.1e-06 Score=57.32 Aligned_cols=40 Identities=18% Similarity=0.295 Sum_probs=30.4
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCceEE---EEEEecCCC
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPN 55 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~~~v~~~P~ 55 (152)
....|.|.+++.+|+|.|+|.|.|..|...+ .+.|.++|.
T Consensus 132 ~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 132 ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 3568999999999999999999997554333 355555554
No 477
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=97.92 E-value=9.2e-06 Score=54.51 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
.+|+.+...+...+|+|.+++.+|+|.|.|.+.|.
T Consensus 61 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 61 SSRFSGSGSGRDYSFSISNLEPEDAATYYCLQYDN 95 (119)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECGG
T ss_pred CCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 46888876667789999999999999999999985
No 478
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=97.92 E-value=2.9e-05 Score=57.78 Aligned_cols=72 Identities=8% Similarity=0.076 Sum_probs=44.7
Q ss_pred cEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCC---ceE-----EEEEEec---CCCCceeec-CCCC--C-CCCeEE
Q psy15979 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG---KHR-----AYLELSG---KPNPAIFRS-HPQG--R-LPNSYN 72 (152)
Q Consensus 8 r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G---~~~-----~~~~v~~---~P~p~~~~~-~~~~--~-~~~~~~ 72 (152)
|+.+...+... |.|.+++.+|+|.|.|.+.|..| ... ..+.|.. .+.+|.+.. .+.. . ....+.
T Consensus 65 R~~~~~~~~~~-L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~ 143 (253)
T 3to4_D 65 DYLATRVTDTE-LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 143 (253)
T ss_dssp EEEEECCSSSC-CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEE
T ss_pred cEEEEeCCCCe-EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceE
Confidence 77776554444 99999999999999999998754 111 1344443 223333322 1110 0 136889
Q ss_pred EEEEecCC
Q psy15979 73 ITWMVSSY 80 (152)
Q Consensus 73 L~W~~~~~ 80 (152)
|.|.+.+.
T Consensus 144 L~C~~~g~ 151 (253)
T 3to4_D 144 LVCLATGF 151 (253)
T ss_dssp EEEEEEEE
T ss_pred EEEEEceE
Confidence 99998764
No 479
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=97.92 E-value=4.7e-05 Score=56.39 Aligned_cols=75 Identities=16% Similarity=0.197 Sum_probs=47.5
Q ss_pred CcEEEEE--cCCEeEEEEceeCCCCCEEEEEEEEcCCC----------------ceEEEEEEe-cCCCCceee-cCCC--
Q psy15979 7 ERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMG----------------KHRAYLELS-GKPNPAIFR-SHPQ-- 64 (152)
Q Consensus 7 ~r~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G----------------~~~~~~~v~-~~P~p~~~~-~~~~-- 64 (152)
+|+.+.. .....+|.|.+++.+|+|.|.|.+.|..| ... .+.|. ..+.+|.+. ..+.
T Consensus 73 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t-~l~V~~~~~~~P~v~~~~~~~~ 151 (239)
T 3tv3_H 73 SRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGT-LVTVSSASTKGPSVFPLAPSSK 151 (239)
T ss_dssp GGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCE-EEEECCCCCBCCEEEEECCCCC
T ss_pred CCEEEEEECCCCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCc-EEeeccCCCcCCEEEEECCChh
Confidence 6887764 24577899999999999999999998642 111 34444 233333333 2221
Q ss_pred CCCCCeEEEEEEecCCCC
Q psy15979 65 GRLPNSYNITWMVSSYTP 82 (152)
Q Consensus 65 ~~~~~~~~L~W~~~~~~p 82 (152)
......+.|.|.+.+..|
T Consensus 152 ~~~g~~v~l~C~~~~~~p 169 (239)
T 3tv3_H 152 STSGGTAALGCLVKDYFP 169 (239)
T ss_dssp C--TTEEEEEEEEEEEBS
T ss_pred hccCCcEEEEEEEeeEeC
Confidence 123578999999876433
No 480
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=97.92 E-value=3.7e-05 Score=59.13 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=43.1
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCC-CCceeecCCC---CCCCCeEEEEEEecCCCC
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKP-NPAIFRSHPQ---GRLPNSYNITWMVSSYTP 82 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P-~p~~~~~~~~---~~~~~~~~L~W~~~~~~p 82 (152)
+.|.|.++..+|.|.|+|+|.|..|.....+.+. ..+ .|..+...+. ......+.|.|.+.+..|
T Consensus 72 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P 142 (323)
T 2wqr_A 72 SELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAP 142 (323)
T ss_dssp EEEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECC
T ss_pred EEEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCC
Confidence 4688888888899999999999998776655431 122 2333333221 123578999999876544
No 481
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=97.91 E-value=1.6e-05 Score=56.68 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=33.4
Q ss_pred cCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEec
Q psy15979 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (152)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~~ 52 (152)
.+....|.|.+++.+|+|.|+|+|.|.+|.....+.|..
T Consensus 153 ~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 153 EGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp TSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 344567889999999999999999999999999877764
No 482
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=97.91 E-value=6.7e-06 Score=66.79 Aligned_cols=43 Identities=28% Similarity=0.315 Sum_probs=33.3
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~ 51 (152)
..|+.+.. .++|.|.+++.+|+|.|+|+|.|..|.++..+.|.
T Consensus 432 ~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~ 474 (477)
T 2id5_A 432 NGRLTVFP---DGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLH 474 (477)
T ss_dssp ---CEECT---TSCEEESSCCSTTCEEEEEEEEETTEEEEEEEEEE
T ss_pred CceEEeCC---CCEEEEeeCChHHCEEEEEEEEeCCCcEEEEEEEE
Confidence 34555532 34699999999999999999999999998876654
No 483
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=97.91 E-value=6.7e-06 Score=60.29 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=27.3
Q ss_pred eEEEEceeCCCCCEEEEEEEEc---CCCceEEEEEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATN---PMGKHRAYLEL 50 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N---~~G~~~~~~~v 50 (152)
..|.|.+++.+|+|.|+|.|.| .+|.+...+.|
T Consensus 213 ~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 213 RNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp TEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred cEEEEecCCcccCEEEEEEecCCccccCccceeEEE
Confidence 6899999999999999999999 45555555554
No 484
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=97.91 E-value=5e-05 Score=59.08 Aligned_cols=28 Identities=29% Similarity=0.398 Sum_probs=23.2
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEE
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAY 47 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~ 47 (152)
+++|.|.+++..|+|+|+|.| .|.....
T Consensus 50 ~~~L~i~~~~~~d~G~YtC~~---~~~~~~~ 77 (306)
T 3d85_D 50 GKTLTIQVKEFGDAGQYTCHK---GGEVLSH 77 (306)
T ss_dssp SSEEEEEECSGGGCEEEEEEE---TTEEEEE
T ss_pred CCEEEEEecCcCCCceEEEee---CCcccce
Confidence 468999999999999999999 3666543
No 485
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=97.90 E-value=9.7e-06 Score=54.42 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
.+|+.+.......+|+|.+++.+|+|.|.|.+.|.
T Consensus 59 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (120)
T 1mqk_L 59 PSRFSGSGSGTQFSLKINSLLPEDFGSYYCQHHYG 93 (120)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CceEEEeccCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 47888876666788999999999999999999985
No 486
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=97.90 E-value=5.4e-05 Score=52.17 Aligned_cols=54 Identities=22% Similarity=0.182 Sum_probs=36.8
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcCCCce-E----EEEEEecCCCCcee
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-R----AYLELSGKPNPAIF 59 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~----~~~~v~~~P~p~~~ 59 (152)
.+||.+...+...+|+|.+++.+|+|.|.|.+.|..+.. . ..+.|.+.|.++.+
T Consensus 68 ~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~fg~GT~L~V~~~p~~~~~ 126 (134)
T 3kg5_A 68 KGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRVMGFSTLAQL 126 (134)
T ss_dssp TTTEEEEECSSEEEEEECSCCTTTCEEEEEEEECTTTCCEEECCCEEEEEECC------
T ss_pred CCeEEEEccCCEEEEEECCCCcCcCEEEEEEEEcCCCCceEECCCEEEEEecCCCHHHh
Confidence 578888766778899999999999999999999874311 1 13556666666543
No 487
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=97.90 E-value=7.8e-06 Score=59.40 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=27.6
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCC-ceEE--EEEEecCCCCc
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMG-KHRA--YLELSGKPNPA 57 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G-~~~~--~~~v~~~P~p~ 57 (152)
...|.|.+++.+|+|.|+|.|.|..| ..+. .+.|.+.|.+|
T Consensus 136 ~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P 179 (204)
T 3sgj_C 136 NSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVS 179 (204)
T ss_dssp CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred CceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCC
Confidence 45799999999999999999999544 3332 35555555443
No 488
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.90 E-value=1.5e-05 Score=58.40 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=30.1
Q ss_pred CCcEEEE--EcCCEeEEEEceeCCCCCEEEEEEEEcCC
Q psy15979 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (152)
Q Consensus 6 ~~r~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (152)
++|+.+. ..+...+|.|.+++.+|+|.|+|.|.|..
T Consensus 185 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 185 DGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp ETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 4677775 34557899999999999999999999984
No 489
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=97.89 E-value=7.5e-06 Score=53.67 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCEeEEEEceeCCCCCEEEEEEEEcC
Q psy15979 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (152)
Q Consensus 6 ~~r~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (152)
.+|+.+...+...+|+|.+++.+|+|.|.|.+.|.
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 59 PDRFTGSGSATDFTLTISSVQAEDFADYHCGQTYN 93 (108)
T ss_dssp CTTEECCBCSSEEEEEESSCCTTCCSEEEEEECSS
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCEEEEEEEccC
Confidence 46787765556778999999999999999999985
No 490
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.89 E-value=9.6e-06 Score=57.84 Aligned_cols=32 Identities=13% Similarity=0.063 Sum_probs=27.6
Q ss_pred eEEEEceeCCCCCEEEEEEEEcCCCceEEEEE
Q psy15979 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLE 49 (152)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~ 49 (152)
+.|.|.++..+|+|.|+|+|+|..|.......
T Consensus 181 s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~ 212 (225)
T 4fmk_A 181 SRYSLVPVGRADGVKVTCRVEHESFEEPILLP 212 (225)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTCSSCEEEE
T ss_pred EEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEE
Confidence 47999999999999999999999987755433
No 491
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.89 E-value=5.2e-05 Score=55.16 Aligned_cols=36 Identities=28% Similarity=0.253 Sum_probs=30.8
Q ss_pred CCcEEEEEc---CCEeEEEEceeCCCCCEEEEEEEEcCC
Q psy15979 6 TERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPM 41 (152)
Q Consensus 6 ~~r~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (152)
++|+.+..+ ....+|.|.+++.+|+|.|.|.+.|..
T Consensus 56 ~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 94 (207)
T 1ypz_E 56 NGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWH 94 (207)
T ss_dssp ETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBC
T ss_pred CCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 478888754 567789999999999999999999974
No 492
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=97.88 E-value=3.9e-05 Score=62.23 Aligned_cols=65 Identities=17% Similarity=0.141 Sum_probs=44.2
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCceEEEEEEe--cCCCCceeecC-CC---CCCCCeEEEEEEecCCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSH-PQ---GRLPNSYNITWMVSSYT 81 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~-~~---~~~~~~~~L~W~~~~~~ 81 (152)
.+.|.|.+++.+|+|.|+|.|.|..|.......|. ....||.+... +. ......+.|.|.+.+..
T Consensus 308 ~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~ 378 (475)
T 1iga_A 308 SSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFS 378 (475)
T ss_pred EEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeE
Confidence 45799999999999999999999999865543442 23344433221 11 12356689999987653
No 493
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.88 E-value=4.2e-05 Score=51.14 Aligned_cols=61 Identities=11% Similarity=0.168 Sum_probs=44.7
Q ss_pred CCCCeEEEEEEecCCCCcceEEEEEEECCCC---------C-------CCcceEE---ecCCCeEEEEEEEEcCCCCCCC
Q psy15979 66 RLPNSYNITWMVSSYTPLEEFKIKYRKIPGN---------E-------PSPMSNQ---LTGTNQYQNRRLVRKRFDRGNS 126 (152)
Q Consensus 66 ~~~~~~~L~W~~~~~~pi~~y~~~~r~~~~~---------~-------~~~~~~~---L~~~~~Y~~rV~A~N~~G~g~~ 126 (152)
.+.+++.|.|..+. ..+..|.|+|...... . ....++. |.+++.|.|+|.|.+..|.|.+
T Consensus 20 ~T~~Si~LsW~~p~-g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p 98 (112)
T 2cui_A 20 VTTSSLRLNWEAPP-GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADS 98 (112)
T ss_dssp CCSSCEEEECCCCT-TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECSSSEEEE
T ss_pred ecCCeEEEEECCCC-CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCEEEEEEEEEECCcccCC
Confidence 45789999999764 4688999999876432 1 1113444 5559999999999998887765
Q ss_pred C
Q psy15979 127 T 127 (152)
Q Consensus 127 s 127 (152)
.
T Consensus 99 ~ 99 (112)
T 2cui_A 99 I 99 (112)
T ss_dssp E
T ss_pred E
Confidence 4
No 494
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.88 E-value=3.6e-06 Score=60.20 Aligned_cols=30 Identities=13% Similarity=0.350 Sum_probs=27.4
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCCCce
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKH 44 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~ 44 (152)
...+.|.|.+++.+|+|.|+|+|.|.+|+.
T Consensus 150 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 150 ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 356789999999999999999999999987
No 495
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=97.88 E-value=1.1e-05 Score=58.93 Aligned_cols=64 Identities=14% Similarity=0.105 Sum_probs=42.7
Q ss_pred EeEEEEceeCCCCCEEEEEEEEcCCCce--EEEEEE-ecCCCCceeecCCC---CCCCCeEEEEEEecCC
Q psy15979 17 RHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLEL-SGKPNPAIFRSHPQ---GRLPNSYNITWMVSSY 80 (152)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~~~v-~~~P~p~~~~~~~~---~~~~~~~~L~W~~~~~ 80 (152)
.+.|.|.+++.+|+|.|+|.|.|..|.. +..+.+ .....||.+...+. ......+.|.|.+.+.
T Consensus 75 ~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~ 144 (218)
T 2rgs_A 75 VSTLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGF 144 (218)
T ss_dssp EEEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEE
T ss_pred EEEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEee
Confidence 3579999999999999999999998865 333322 12333444322111 1135789999999873
No 496
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=97.88 E-value=1e-05 Score=57.76 Aligned_cols=28 Identities=14% Similarity=0.329 Sum_probs=25.3
Q ss_pred CEeEEEEceeCCCCCEEEEEEEEcCCCc
Q psy15979 16 SRHTLMIRKVVASDFGNYSCEATNPMGK 43 (152)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (152)
....|.|.+++.+|+|.|+|.|.|..+.
T Consensus 153 ~~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 180 (196)
T 3p2t_A 153 HQAEFPMSPVTSVHGGTYRCFSSHGFSH 180 (196)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECGGGT
T ss_pred cceEEEeCCCcccCCCeEEEEEEcCCCC
Confidence 4678999999999999999999998873
No 497
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=97.88 E-value=3.9e-05 Score=57.46 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=45.4
Q ss_pred cEEEEE-cCCEeEEEEceeCCCCCEEEEEEEEcCCCc------eEEEEEEec---CCCCce-eecCCCC---CCCCeEEE
Q psy15979 8 RRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGK------HRAYLELSG---KPNPAI-FRSHPQG---RLPNSYNI 73 (152)
Q Consensus 8 r~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~------~~~~~~v~~---~P~p~~-~~~~~~~---~~~~~~~L 73 (152)
|+.+.. .....+|.|.+++.+|+|.|.|.+.|..+. ....+.|.. .+.+|. ....+.. .....+.|
T Consensus 90 r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L 169 (270)
T 3qib_D 90 RFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATL 169 (270)
T ss_dssp HEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEE
T ss_pred cEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEE
Confidence 777753 345778999999999999999999974321 112344443 222333 2221111 12478999
Q ss_pred EEEecCC
Q psy15979 74 TWMVSSY 80 (152)
Q Consensus 74 ~W~~~~~ 80 (152)
.|.+.+.
T Consensus 170 ~C~~~g~ 176 (270)
T 3qib_D 170 VCLATGF 176 (270)
T ss_dssp EEEEEEE
T ss_pred EEEecce
Confidence 9998763
No 498
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=97.88 E-value=1.5e-05 Score=53.57 Aligned_cols=46 Identities=26% Similarity=0.452 Sum_probs=34.1
Q ss_pred CcEEEEE---cCCEeEEEEceeCCCCCEEEEEEEEc-CCCceEEEEEEec
Q psy15979 7 ERRIMET---RGSRHTLMIRKVVASDFGNYSCEATN-PMGKHRAYLELSG 52 (152)
Q Consensus 7 ~r~~i~~---~~~~~~L~I~~v~~~D~G~YtC~A~N-~~G~~~~~~~v~~ 52 (152)
+|+.+.. .....+|.|.|++.+|+|.|.|.+.+ ..|.....+.|++
T Consensus 66 ~R~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~V 115 (123)
T 4gjt_B 66 GRVEQPPPPRNPLDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRV 115 (123)
T ss_dssp TTEECCCSSCCTTBCCEEEESCCSSSCSEEEEEEEESSSCEEEEEEEEEC
T ss_pred eEEEEecCCCcCCEEEEEECCCChHHCEEEEEEEEECCCCeEEeEEEEEE
Confidence 4555532 22356799999999999999998776 6888777766653
No 499
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.87 E-value=1.9e-05 Score=57.38 Aligned_cols=27 Identities=11% Similarity=0.270 Sum_probs=22.6
Q ss_pred CCEeEEEEceeCCCCCEEEEEEEEcCC
Q psy15979 15 GSRHTLMIRKVVASDFGNYSCEATNPM 41 (152)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (152)
...++|.|.+++.+|+|.|+|.|.|..
T Consensus 46 ~~~~~L~i~~v~~~DsG~Y~C~~~~~~ 72 (204)
T 1sy6_A 46 EDKKKWNLGSNAKDPRGMYQCKGSQNK 72 (204)
T ss_dssp SSCCCEEEEEGGGCCEEEEEEESSSSC
T ss_pred CCCCeEEeCCCCcCCCEEEEEEecCCC
Confidence 345679999999999999999986643
No 500
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.86 E-value=9.2e-05 Score=55.09 Aligned_cols=67 Identities=12% Similarity=0.243 Sum_probs=43.2
Q ss_pred EEEEcee---CCCCCEE--EEEEEEcCCCceEEEEEEe--cCCCCceeecCCCCCCCCeEEEEEEecCCCCcceEEE
Q psy15979 19 TLMIRKV---VASDFGN--YSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKI 88 (152)
Q Consensus 19 ~L~I~~v---~~~D~G~--YtC~A~N~~G~~~~~~~v~--~~P~p~~~~~~~~~~~~~~~~L~W~~~~~~pi~~y~~ 88 (152)
.|.|..+ +.+|+|. |+|.|.|..|..+..+.|. ..|.|..............+.|.|.+. |...+.|
T Consensus 57 ~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~---p~~~i~W 130 (265)
T 2oz4_A 57 SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH---PRAKVTL 130 (265)
T ss_dssp EEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC---TTSEEEE
T ss_pred eEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc---CCCEEEE
Confidence 5666655 7788885 9999999999987765554 445443322211112468899999987 3334454
Done!