Query psy15984
Match_columns 68
No_of_seqs 104 out of 1070
Neff 6.9
Searched_HMMs 46136
Date Fri Aug 16 18:00:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15984.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15984hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2058|consensus 99.7 2.3E-18 5E-23 123.1 4.7 55 5-59 230-285 (436)
2 smart00164 TBC Domain in Tre-2 99.7 2.4E-17 5.2E-22 104.9 5.8 61 5-65 79-140 (199)
3 COG5210 GTPase-activating prot 99.7 2.2E-17 4.8E-22 118.7 5.4 62 5-66 289-352 (496)
4 KOG2197|consensus 99.7 6.4E-18 1.4E-22 122.2 2.3 63 5-67 270-332 (488)
5 KOG4567|consensus 99.6 4.3E-17 9.4E-22 113.2 1.7 59 4-62 175-249 (370)
6 PF00566 RabGAP-TBC: Rab-GTPas 99.5 2.8E-14 6.1E-19 90.8 5.1 61 5-65 77-138 (214)
7 KOG1092|consensus 99.5 9E-15 1.9E-19 104.6 1.8 67 2-68 269-362 (484)
8 KOG2224|consensus 99.3 2E-12 4.3E-17 94.0 1.8 45 5-49 528-572 (781)
9 KOG2223|consensus 99.1 1E-10 2.3E-15 84.6 4.4 60 5-65 387-448 (586)
10 KOG4347|consensus 98.9 8.7E-10 1.9E-14 82.1 3.0 54 5-59 274-328 (671)
11 KOG2222|consensus 98.7 1.6E-08 3.4E-13 74.6 3.5 48 7-55 246-294 (848)
12 KOG1102|consensus 98.6 1.8E-08 4E-13 71.6 2.9 59 5-64 217-276 (397)
13 KOG2221|consensus 98.6 2.9E-08 6.2E-13 66.9 2.9 50 5-55 175-225 (267)
14 KOG4436|consensus 98.1 3.4E-06 7.4E-11 64.7 4.0 59 5-64 654-714 (948)
15 KOG2224|consensus 97.5 2.6E-05 5.6E-10 57.5 0.7 54 15-68 566-619 (781)
16 KOG1091|consensus 97.4 4.1E-05 9E-10 57.1 0.4 40 2-41 131-172 (625)
17 KOG1093|consensus 96.6 0.0026 5.7E-08 48.1 3.7 59 3-61 417-479 (725)
18 KOG1648|consensus 96.3 0.0003 6.6E-09 52.6 -2.9 60 8-68 639-698 (813)
19 KOG2595|consensus 93.2 0.094 2E-06 37.7 2.8 35 11-46 137-171 (395)
20 KOG4436|consensus 89.1 0.51 1.1E-05 37.3 3.4 50 7-57 269-320 (948)
21 PF08109 Antimicrobial14: Lact 63.2 5.7 0.00012 18.5 1.3 15 15-29 3-17 (31)
22 PF10260 SAYSvFN: Uncharacteri 54.4 6.3 0.00014 22.1 0.7 17 4-20 43-59 (71)
23 COG5460 Uncharacterized conser 51.4 15 0.00032 21.2 2.0 24 17-40 51-75 (82)
24 PF07152 YaeQ: YaeQ protein; 42.3 5 0.00011 26.1 -1.0 23 1-23 40-63 (174)
25 KOG2801|consensus 37.2 43 0.00093 24.3 2.9 33 8-40 121-153 (559)
26 COG4681 Uncharacterized protei 30.9 16 0.00035 23.8 -0.0 27 1-27 40-67 (181)
27 PRK15425 gapA glyceraldehyde-3 29.8 17 0.00036 25.8 -0.1 23 6-28 307-329 (331)
28 COG2111 MnhB Multisubunit Na+/ 29.8 54 0.0012 20.6 2.3 22 11-32 45-66 (162)
29 PF08189 Meleagrin: Meleagrin/ 25.8 30 0.00065 17.2 0.4 10 11-20 5-14 (39)
30 PLN02272 glyceraldehyde-3-phos 25.3 27 0.00058 25.7 0.3 24 6-29 392-415 (421)
31 PLN02237 glyceraldehyde-3-phos 23.6 30 0.00065 25.7 0.3 25 6-30 386-410 (442)
32 PF10557 Cullin_Nedd8: Cullin 23.5 1.1E+02 0.0023 16.3 2.4 27 41-67 28-54 (68)
33 PLN03096 glyceraldehyde-3-phos 23.4 30 0.00064 25.3 0.2 23 6-28 368-390 (395)
34 PRK07729 glyceraldehyde-3-phos 22.2 28 0.00061 24.9 -0.1 24 6-29 308-331 (343)
35 PRK08955 glyceraldehyde-3-phos 20.9 38 0.00083 24.0 0.4 23 6-28 308-330 (334)
36 PF07416 Crinivirus_P26: Crini 20.2 70 0.0015 20.9 1.4 15 34-48 24-38 (227)
37 PRK14562 haloacid dehalogenase 20.0 1.5E+02 0.0032 19.4 3.0 52 16-67 113-175 (204)
No 1
>KOG2058|consensus
Probab=99.73 E-value=2.3e-18 Score=123.13 Aligned_cols=55 Identities=22% Similarity=0.324 Sum_probs=47.6
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhhhc-CCCCCchh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRMAA-NFPTTGGV 59 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~~~-~y~~~~~g 59 (68)
|.||+++||+||||||||.++|++|+++++|++|||++..+++++.+ +|.++..|
T Consensus 230 L~Aya~hNp~vGYCQGmNflAallLL~~~~EE~AFW~Lv~iie~~lp~Yyt~nL~g 285 (436)
T KOG2058|consen 230 LLAYARHNPSVGYCQGMNFLAALLLLLMPSEEDAFWMLVALIENYLPRYYTPNLIG 285 (436)
T ss_pred HHHHHhhCCCCcchhhHHHHHHHHHHhcCChHHHHHHHHHHHHHhchhhcCchhhh
Confidence 46789999999999999999999999999999999999999999754 44444444
No 2
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=99.70 E-value=2.4e-17 Score=104.94 Aligned_cols=61 Identities=30% Similarity=0.499 Sum_probs=50.9
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhhhcC-CCCCchhHHHHhh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRMAAN-FPTTGGVMDNHFA 65 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~~~~-y~~~~~g~~~~~~ 65 (68)
+.+|+.+||++|||||||+|+++++.++++|++|||||.++|++.... |.++.+|+...+.
T Consensus 79 L~~~~~~~p~~gY~QGm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~ 140 (199)
T smart00164 79 LKAYALYNPEVGYCQGMNFLAAPLLLVMPDEEDAFWCLVKLMERYGPNFYLPDMSGLQLDLL 140 (199)
T ss_pred HHHHHHHCCCCceeccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCcccCCCChHHHHHHHH
Confidence 345777899999999999999999999989999999999999998766 5555566665543
No 3
>COG5210 GTPase-activating protein [General function prediction only]
Probab=99.70 E-value=2.2e-17 Score=118.75 Aligned_cols=62 Identities=26% Similarity=0.466 Sum_probs=56.3
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHH--hhhcCCCCCchhHHHHhhh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMD--RMAANFPTTGGVMDNHFAN 66 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~--~~~~~y~~~~~g~~~~~~~ 66 (68)
+.+|+++||++|||||||++++||+.+++.|++||||++++|+ .++..|..+++|++.....
T Consensus 289 L~ays~~~p~vgY~QgMn~l~a~ll~~~~~Ee~AF~~l~~L~~~~~l~~~~~~~~~G~~~~~~~ 352 (496)
T COG5210 289 LKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQAFWCLVKLLKNYGLPGYFLKNLSGLHRDLKV 352 (496)
T ss_pred HHHHHhcCCCCceeccHHHHHHHHHHHhhhhHHHHHHHHHHHHhccchhhcccCCcHHHHHHHH
Confidence 4578889999999999999999999999999999999999999 3789999999998877654
No 4
>KOG2197|consensus
Probab=99.69 E-value=6.4e-18 Score=122.19 Aligned_cols=63 Identities=38% Similarity=0.743 Sum_probs=60.7
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhhhcCCCCCchhHHHHhhhc
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRMAANFPTTGGVMDNHFANM 67 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~~~~y~~~~~g~~~~~~~l 67 (68)
+.+|+++|+++||||||+|+++|++.++++|.+|||||+.+|+++..||..|+.||..++..+
T Consensus 270 L~ty~~~~~d~GY~QgmSDllspi~~v~~de~~aFwcFv~fm~~~~~nF~~d~~~~~~Ql~~~ 332 (488)
T KOG2197|consen 270 LLTYAVYDFDLGYCQGMSDLLSPILIVMEDEVEAFWCFVGFMDRLRHNFRIDQSGMQTQLAQL 332 (488)
T ss_pred HhhcccccCccccccCchhhcCcceeeecCchHHHHHHHHHHHHHhhcCccccccHHHHhhhh
Confidence 678999999999999999999999999999999999999999999999999999999998765
No 5
>KOG4567|consensus
Probab=99.64 E-value=4.3e-17 Score=113.18 Aligned_cols=59 Identities=31% Similarity=0.574 Sum_probs=49.3
Q ss_pred hhhh--hhhcCCCCCcccchHHHHHHHHHHhc----------CchhHHHHHHHHHHhhhcCCCCC----chhHHH
Q psy15984 4 SKVT--YVWEHLDVGYMQGMCDLVAPILVILD----------DESLTYSCFCCLMDRMAANFPTT----GGVMDN 62 (68)
Q Consensus 4 ~~~~--y~~~n~~igY~QGm~~l~a~ll~v~~----------~E~~aF~~f~~lm~~~~~~y~~~----~~g~~~ 62 (68)
+|++ ||-.||+||||||||+|+||+++|+. .|+|||+||..+|..++|+|..+ +.||+.
T Consensus 175 erilfiyAKLNpGi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMseirDnf~k~LDdS~~GI~~ 249 (370)
T KOG4567|consen 175 ERILFIYAKLNPGIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFFCFTQLMSEIRDNFIKTLDDSVGGIHF 249 (370)
T ss_pred HHHHHHHhhcCCcchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHHHHHHHHHHHHHHHHHhccccccchHH
Confidence 4444 56679999999999999999999983 59999999999999999999542 455544
No 6
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=99.50 E-value=2.8e-14 Score=90.76 Aligned_cols=61 Identities=30% Similarity=0.474 Sum_probs=51.9
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHH-HhhhcCCCCCchhHHHHhh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLM-DRMAANFPTTGGVMDNHFA 65 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm-~~~~~~y~~~~~g~~~~~~ 65 (68)
+.+|+.+||++||+|||++|+++++.++.+|++|||||.+++ ....+.|..+.+++...+.
T Consensus 77 L~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~ 138 (214)
T PF00566_consen 77 LSAYAKYNPDVGYCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLPDFFQPNFKGLQKILK 138 (214)
T ss_dssp HHHHHHHTTTTSS-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGGGGTSTTHHHHHHHHH
T ss_pred HHHhccccccccccchhhhhhhhhhhhcccccchhccccchhcccccccccccccccchhhh
Confidence 356778899999999999999999988899999999999999 6677888888788766543
No 7
>KOG1092|consensus
Probab=99.49 E-value=9e-15 Score=104.57 Aligned_cols=67 Identities=31% Similarity=0.686 Sum_probs=60.8
Q ss_pred cchhhhhhh--cCCCCCcccchHHHHHHHHHHh-------------------------cCchhHHHHHHHHHHhhhcCCC
Q psy15984 2 SLSKVTYVW--EHLDVGYMQGMCDLVAPILVIL-------------------------DDESLTYSCFCCLMDRMAANFP 54 (68)
Q Consensus 2 ~~~~~~y~~--~n~~igY~QGm~~l~a~ll~v~-------------------------~~E~~aF~~f~~lm~~~~~~y~ 54 (68)
+++|+.|.| +||..||+||.||++.|++.++ ..|+|+|||++++++.+++||.
T Consensus 269 ~lerIl~iwairhpAsGyvqgindlvtpf~vvfl~e~l~~~~~~~~~d~~~l~~E~~~~iEADsyWClskLLD~IQDNYt 348 (484)
T KOG1092|consen 269 MLERILYIWAIRHPASGYVQGINDLVTPFFVVFLSEYLGPIMDVESIDMSLLPAENAEDIEADAYWCLSKLLDGIQDNYT 348 (484)
T ss_pred HHHHHHHHHHHhcccccccccceeeechhhhhhhHhhcCccccccccchhhccHHHHhhhhhhHHHHHHHHHHHhhhhhh
Confidence 678888877 6999999999999999999876 2599999999999999999999
Q ss_pred CCchhHHHHhhhcC
Q psy15984 55 TTGGVMDNHFANMR 68 (68)
Q Consensus 55 ~~~~g~~~~~~~l~ 68 (68)
--|+||.++.++|+
T Consensus 349 faQpGIq~kV~~L~ 362 (484)
T KOG1092|consen 349 FAQPGIQRKVKNLK 362 (484)
T ss_pred hcChhHHHHHHHHH
Confidence 99999999988774
No 8
>KOG2224|consensus
Probab=99.25 E-value=2e-12 Score=93.96 Aligned_cols=45 Identities=40% Similarity=0.690 Sum_probs=38.6
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRM 49 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~ 49 (68)
+.-||+|||.+||.|||+|+++|.++-+++|+++||||+.+|+.+
T Consensus 528 lln~avyn~~m~ysqgmsdllapvlcevqnesetfwcfvglmqgm 572 (781)
T KOG2224|consen 528 LLNFAVYNPAMGYSQGMSDLLAPVLCEVQNESETFWCFVGLMQGM 572 (781)
T ss_pred HHhheeecccccccccchhhcchhhhhhccccchhhhhhhhhccc
Confidence 345999999999999999999999988888888888888888743
No 9
>KOG2223|consensus
Probab=99.09 E-value=1e-10 Score=84.60 Aligned_cols=60 Identities=32% Similarity=0.420 Sum_probs=52.2
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhh--hcCCCCCchhHHHHhh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRM--AANFPTTGGVMDNHFA 65 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~--~~~y~~~~~g~~~~~~ 65 (68)
+-||+.+.|++||||||+.|+|.+++-+ ++.+||-||.+++++- ...|.-|++-|...+.
T Consensus 387 L~AYt~yRpDvgYVqgmSFIaAvLllnm-d~~~AFiafANLLdkp~q~Aff~~d~s~m~~yf~ 448 (586)
T KOG2223|consen 387 LGAYTCYRPDVGYVQGMSFIAAVLLLNM-DLADAFIAFANLLDKPCQQAFFRVDHSSMLSYFA 448 (586)
T ss_pred hhhheeecCccccccchHHHHHHHHHcC-CcHHHHHHHHHHhccHHHHHHHhcCcHHHHHHHH
Confidence 4689999999999999999999999885 5889999999999884 5788888888876654
No 10
>KOG4347|consensus
Probab=98.90 E-value=8.7e-10 Score=82.07 Aligned_cols=54 Identities=20% Similarity=0.304 Sum_probs=44.8
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhhh-cCCCCCchh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRMA-ANFPTTGGV 59 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~~-~~y~~~~~g 59 (68)
|.||+|.||+|||||-||-+++.++..+ .|+.+||+++++++..- +.|.....|
T Consensus 274 L~Aya~~Np~vGYcQaMNIV~s~lll~~-~EEeafwll~~lce~~ip~yys~~vvG 328 (671)
T KOG4347|consen 274 LTAYAWSNPEVGYCQAMNIVGSELLLFC-KEEEAFWLLSKLCEIYIPDYYSKTVVG 328 (671)
T ss_pred HHhhhccCCchhHHHHHHHHHHhhhhhh-ccchHHHHHHHHHHHhcccccchhhhh
Confidence 5789999999999999999999988774 56799999999999964 555555444
No 11
>KOG2222|consensus
Probab=98.68 E-value=1.6e-08 Score=74.60 Aligned_cols=48 Identities=27% Similarity=0.492 Sum_probs=39.8
Q ss_pred hhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhh-hcCCCC
Q psy15984 7 TYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRM-AANFPT 55 (68)
Q Consensus 7 ~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~-~~~y~~ 55 (68)
+.|+.-|++||||||..|++.+++.+. |+.|||+...+++.+ .++|.+
T Consensus 246 ~ia~ifpdigycqg~gviva~lllf~~-ee~afwmmaaiiedilp~nfys 294 (848)
T KOG2222|consen 246 CIAFIFPDIGYCQGMGVIVACLLLFCE-EENAFWMMAAIIEDILPANFYS 294 (848)
T ss_pred hheeecCCcccccCccHHHHHHHHHhc-chhHHHHHHHHHHHhcCchhhh
Confidence 355668999999999999999988866 559999999999986 456643
No 12
>KOG1102|consensus
Probab=98.65 E-value=1.8e-08 Score=71.62 Aligned_cols=59 Identities=25% Similarity=0.394 Sum_probs=48.0
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhh-hcCCCCCchhHHHHh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRM-AANFPTTGGVMDNHF 64 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~-~~~y~~~~~g~~~~~ 64 (68)
+.+|+.++|++||||||..++++++..+. |++|||.++++|+.. .+.|....+|+.+.+
T Consensus 217 l~a~s~~~~~~gy~q~m~~~a~~ll~~~~-ee~af~~lv~l~~~~~~~~~~~~~~~l~~~~ 276 (397)
T KOG1102|consen 217 LKAYSLYDPEVGYCQGMSSIAAPLLLYLP-EEEAFPLLVKLMKNYGLDLLSPGFSGLQRSF 276 (397)
T ss_pred chhhcccCCCcccccchhhHhhhhhccCc-hhhhhhhhhhhhhccchhcccccCCchhhhH
Confidence 36899999999999999999999999877 889999999999875 344455555555444
No 13
>KOG2221|consensus
Probab=98.61 E-value=2.9e-08 Score=66.93 Aligned_cols=50 Identities=16% Similarity=0.351 Sum_probs=43.1
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhhh-cCCCC
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRMA-ANFPT 55 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~~-~~y~~ 55 (68)
+.+|..++|+.||||+-..|++.++..++. .|+||||+++++..- ..|++
T Consensus 175 lka~ti~~pe~g~cq~qapiaa~llmhmp~-rdaf~~~vqicekylqgy~~s 225 (267)
T KOG2221|consen 175 LKAYTIYKPEEGYCQAQAPIAAVLLMHMPA-RDAFWCFVQICEKYLQGYYSS 225 (267)
T ss_pred HHHHHHhCchhhhhhhhchHHHHHHhcccH-HHHHHHHHHHHHHHccccccc
Confidence 568999999999999999999999998775 599999999999865 44544
No 14
>KOG4436|consensus
Probab=98.10 E-value=3.4e-06 Score=64.74 Aligned_cols=59 Identities=19% Similarity=0.276 Sum_probs=50.6
Q ss_pred hhhhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHh--hhcCCCCCchhHHHHh
Q psy15984 5 KVTYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDR--MAANFPTTGGVMDNHF 64 (68)
Q Consensus 5 ~~~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~--~~~~y~~~~~g~~~~~ 64 (68)
+.+|...+|++|||||.+.+++++++.+. |+.||-+...+|.. ++.-|.+|+..++.+.
T Consensus 654 Lkayslld~e~gycqg~~fv~gvlllh~~-e~~afellk~LM~~r~~r~qy~pdm~~lq~qm 714 (948)
T KOG4436|consen 654 LKAYSLLDPEVGYCQGLSFVAGVLLLHMS-EENAFELLKFLMFDRGMRKQYRPDMKKLQIQM 714 (948)
T ss_pred HHHhcccCccccccCcchhhhhhhHhhcc-hhhHHHHHHHHHHHHhhHhhhchHHHHHHHHH
Confidence 56788899999999999999999999965 67999999999966 4788999887776654
No 15
>KOG2224|consensus
Probab=97.54 E-value=2.6e-05 Score=57.45 Aligned_cols=54 Identities=44% Similarity=0.598 Sum_probs=43.8
Q ss_pred CCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhhhcCCCCCchhHHHHhhhcC
Q psy15984 15 VGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRMAANFPTTGGVMDNHFANMR 68 (68)
Q Consensus 15 igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~~~~y~~~~~g~~~~~~~l~ 68 (68)
+|-.|||+|+++|++.-+.+|+|+||||+.+|++.--.-++....|.+++..||
T Consensus 566 vglmqgmsdlvapilaevldesdtfwcfvglmqna~fv~sp~d~dmd~~l~ylr 619 (781)
T KOG2224|consen 566 VGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQNAFFVCSPRDEDMDHNLLYLR 619 (781)
T ss_pred hhhhccchhhhhhHHHhhhccccchhhhhhhhcceEEEeCCcchhhhHhHHHHH
Confidence 678899999999999999999999999999999854444454566777766553
No 16
>KOG1091|consensus
Probab=97.40 E-value=4.1e-05 Score=57.07 Aligned_cols=40 Identities=35% Similarity=0.679 Sum_probs=30.4
Q ss_pred cchhhh--hhhcCCCCCcccchHHHHHHHHHHhcCchhHHHH
Q psy15984 2 SLSKVT--YVWEHLDVGYMQGMCDLVAPILVILDDESLTYSC 41 (68)
Q Consensus 2 ~~~~~~--y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~ 41 (68)
+|++++ |+.-||.+||-|||.++.||+++|.....++|-=
T Consensus 131 mLr~iLl~~~lehp~i~YrQGMHElLAPl~fVl~~D~q~l~h 172 (625)
T KOG1091|consen 131 MLRRILLLYALEHPEIGYRQGMHELLAPLLFVLHVDNQALLH 172 (625)
T ss_pred HHHHHHHHHHhhchhhhHHhhhhhhhhhhhhheehhHHHHHH
Confidence 456665 4455999999999999999999998654444443
No 17
>KOG1093|consensus
Probab=96.61 E-value=0.0026 Score=48.13 Aligned_cols=59 Identities=22% Similarity=0.321 Sum_probs=45.9
Q ss_pred chhhhhh--hcCCCCCcccchHHHHHHHHHHh-cCchhHHHHHHHHHHhhh-cCCCCCchhHH
Q psy15984 3 LSKVTYV--WEHLDVGYMQGMCDLVAPILVIL-DDESLTYSCFCCLMDRMA-ANFPTTGGVMD 61 (68)
Q Consensus 3 ~~~~~y~--~~n~~igY~QGm~~l~a~ll~v~-~~E~~aF~~f~~lm~~~~-~~y~~~~~g~~ 61 (68)
|+|+.-| ..+|..-|-||.-.+++||++.. ++|..||-|+..++-+.. ..|..|.+.+.
T Consensus 417 lrRvLkawv~~s~~fvywqgldsLa~PFl~ln~Nne~laF~~~~~fi~kycq~fflkdns~vi 479 (725)
T KOG1093|consen 417 LRRVLKAWVTWSPIFVYWQGLDSLAAPFLYLNFNNELLAFACIATFIPKYCQHFFLKDNSNVI 479 (725)
T ss_pred HHHHHHHHHhcCcceeecCCChhhhhhHHHHhcCchHHHHHHHHHHHHHHHHHHHhhcCchhH
Confidence 4555544 46899999999999999998775 789999999999998865 45556555543
No 18
>KOG1648|consensus
Probab=96.25 E-value=0.0003 Score=52.57 Aligned_cols=60 Identities=48% Similarity=0.870 Sum_probs=46.4
Q ss_pred hhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhhhcCCCCCchhHHHHhhhcC
Q psy15984 8 YVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRMAANFPTTGGVMDNHFANMR 68 (68)
Q Consensus 8 y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~~~~y~~~~~g~~~~~~~l~ 68 (68)
|.-.|.+-||.|||+|+.+|++..+++|..+--||+-+|-.-+..|.. .+||..-+.++|
T Consensus 639 ~~~~~l~~~~~~~~~dl~~p~~~~~ed~~~~~e~~s~~~~~q~~~~~q-~~~~~~~l~~~r 698 (813)
T KOG1648|consen 639 YVRRNLEEGYTQGMCDLLAPLLVTFEDEALTLECFSLLMLRQRGKFPQ-RPGMSKCLLNLR 698 (813)
T ss_pred eeccccccccccchhhccCCcCCChhhcccccCCCcHHHHHhcccCCC-CCCccccccccc
Confidence 444577789999999999999999999999999999888776666654 566655554443
No 19
>KOG2595|consensus
Probab=93.17 E-value=0.094 Score=37.71 Aligned_cols=35 Identities=26% Similarity=0.338 Sum_probs=29.8
Q ss_pred cCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHH
Q psy15984 11 EHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLM 46 (68)
Q Consensus 11 ~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm 46 (68)
.+|+..|=||.+||+..|++++. |.+|+-..+.+-
T Consensus 137 ~yP~L~YYQGyHDI~~tfLLv~g-E~~Al~l~E~L~ 171 (395)
T KOG2595|consen 137 KYPTLNYYQGYHDIVVTFLLVVG-ELEALSLMEELS 171 (395)
T ss_pred HCCCcchhcchhHHHHHHHHhhh-hHhhhHHHHHHH
Confidence 48999999999999999999976 778887766654
No 20
>KOG4436|consensus
Probab=89.07 E-value=0.51 Score=37.27 Aligned_cols=50 Identities=20% Similarity=0.097 Sum_probs=39.6
Q ss_pred hhhhcCCCCCcccchHHHHHHHHHHhcCchhHHHHHHHHHHhh--hcCCCCCc
Q psy15984 7 TYVWEHLDVGYMQGMCDLVAPILVILDDESLTYSCFCCLMDRM--AANFPTTG 57 (68)
Q Consensus 7 ~y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~~f~~lm~~~--~~~y~~~~ 57 (68)
+|...+-++|||||-|.+++.++..++ +..+|-.++.+|... ++.+.+.+
T Consensus 269 ~~~~~~~E~ifsqGs~~m~Gll~l~~~-~E~assv~~~lm~~~rl~~l~kpe~ 320 (948)
T KOG4436|consen 269 AYSTKDLEVIFSQGSAFMVGLLLLQMP-VEEASSVKVQLMILYRLRELSKPEM 320 (948)
T ss_pred HHhhhhhhhhhccchHHHHHHHHhcCc-HHHHHHHHHHHHHhhcccccCCccc
Confidence 456667899999999999999988865 559999999999774 45665543
No 21
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=63.22 E-value=5.7 Score=18.50 Aligned_cols=15 Identities=40% Similarity=0.764 Sum_probs=10.8
Q ss_pred CCcccchHHHHHHHH
Q psy15984 15 VGYMQGMCDLVAPIL 29 (68)
Q Consensus 15 igY~QGm~~l~a~ll 29 (68)
.||.||.-|.+--.+
T Consensus 3 sgyiqgipdflkgyl 17 (31)
T PF08109_consen 3 SGYIQGIPDFLKGYL 17 (31)
T ss_pred cccccccHHHHHHHH
Confidence 489999888765533
No 22
>PF10260 SAYSvFN: Uncharacterized conserved domain (SAYSvFN); InterPro: IPR019387 This domain of approximately 75 residues contains a highly conserved SATSv/iFN motif. The function is unknown but the domain is conserved from plants to humans.
Probab=54.43 E-value=6.3 Score=22.14 Aligned_cols=17 Identities=12% Similarity=0.071 Sum_probs=14.9
Q ss_pred hhhhhhhcCCCCCcccc
Q psy15984 4 SKVTYVWEHLDVGYMQG 20 (68)
Q Consensus 4 ~~~~y~~~n~~igY~QG 20 (68)
+++||++.|++.....|
T Consensus 43 e~SAYSVFN~~~~~i~G 59 (71)
T PF10260_consen 43 ELSAYSVFNKGCERIPG 59 (71)
T ss_pred CccchhhhCCCccccCC
Confidence 46899999999988887
No 23
>COG5460 Uncharacterized conserved protein [Function unknown]
Probab=51.39 E-value=15 Score=21.15 Aligned_cols=24 Identities=33% Similarity=0.342 Sum_probs=16.8
Q ss_pred cccchHHHHHHHHHHhcC-chhHHH
Q psy15984 17 YMQGMCDLVAPILVILDD-ESLTYS 40 (68)
Q Consensus 17 Y~QGm~~l~a~ll~v~~~-E~~aF~ 40 (68)
|.||.+|-.+.+.--..+ +.+.||
T Consensus 51 YNQGi~da~a~i~ekl~d~te~l~~ 75 (82)
T COG5460 51 YNQGIKDARAVIEEKLADMTEELFA 75 (82)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 799999999887765544 334444
No 24
>PF07152 YaeQ: YaeQ protein; InterPro: IPR009822 This family consists of several hypothetical bacterial proteins of around 180 residues in length, which are often known as YaeQ. YaeQ is homologous to RfaH, a specialised transcription elongation protein. YaeQ is known to compensate for loss of RfaH function [].; PDB: 3C0U_B 2OT9_A 2G3W_B.
Probab=42.31 E-value=5 Score=26.12 Aligned_cols=23 Identities=13% Similarity=0.430 Sum_probs=15.7
Q ss_pred Ccchhhhhhhc-CCCCCcccchHH
Q psy15984 1 MSLSKVTYVWE-HLDVGYMQGMCD 23 (68)
Q Consensus 1 ~~~~~~~y~~~-n~~igY~QGm~~ 23 (68)
||+++.||+.. +.++.+..|.++
T Consensus 40 mm~RlLAf~l~a~e~L~FtkGls~ 63 (174)
T PF07152_consen 40 MMVRLLAFALNAHERLEFTKGLST 63 (174)
T ss_dssp HHHHHHHHHHT--TTEEE--CCC-
T ss_pred HHHHHHHHHHcCCcCceecCCCCC
Confidence 47889999975 788899999776
No 25
>KOG2801|consensus
Probab=37.22 E-value=43 Score=24.32 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=24.7
Q ss_pred hhhcCCCCCcccchHHHHHHHHHHhcCchhHHH
Q psy15984 8 YVWEHLDVGYMQGMCDLVAPILVILDDESLTYS 40 (68)
Q Consensus 8 y~~~n~~igY~QGm~~l~a~ll~v~~~E~~aF~ 40 (68)
-+..-|+|.+|...-..++.++-..-+|++.|-
T Consensus 121 Ganqfpdisfcpalpavvalllhysideaecfe 153 (559)
T KOG2801|consen 121 LANQFPDISFCPALPAVVALLLHYSIDEAECFE 153 (559)
T ss_pred HhccCCCcccCcchHHHHHHHHHhcccHHHHHH
Confidence 344569999999998888887766566766544
No 26
>COG4681 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.91 E-value=16 Score=23.75 Aligned_cols=27 Identities=15% Similarity=0.276 Sum_probs=19.9
Q ss_pred Ccchhhhhhhc-CCCCCcccchHHHHHH
Q psy15984 1 MSLSKVTYVWE-HLDVGYMQGMCDLVAP 27 (68)
Q Consensus 1 ~~~~~~~y~~~-n~~igY~QGm~~l~a~ 27 (68)
||+++.+|+.+ +..+-+..|.++-=-|
T Consensus 40 mmlRlLA~~~~a~E~l~FtrGLs~~DEP 67 (181)
T COG4681 40 MMLRLLAWLKYADERLAFTRGLSADDEP 67 (181)
T ss_pred HHHHHHHHHHhcchhhhhccCCCCCCCH
Confidence 57888888865 6778888898774444
No 27
>PRK15425 gapA glyceraldehyde-3-phosphate dehydrogenase A; Provisional
Probab=29.83 E-value=17 Score=25.84 Aligned_cols=23 Identities=30% Similarity=0.527 Sum_probs=19.2
Q ss_pred hhhhhcCCCCCcccchHHHHHHH
Q psy15984 6 VTYVWEHLDVGYMQGMCDLVAPI 28 (68)
Q Consensus 6 ~~y~~~n~~igY~QGm~~l~a~l 28 (68)
+.++||+.+.||.+-|-|++..+
T Consensus 307 k~~~WyDNE~gys~r~~d~~~~~ 329 (331)
T PRK15425 307 KLVSWYDNETGYSNKVLDLIAHI 329 (331)
T ss_pred EEEEEecCchhHHHHHHHHHHHH
Confidence 45789999999999999987643
No 28
>COG2111 MnhB Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism]
Probab=29.81 E-value=54 Score=20.61 Aligned_cols=22 Identities=27% Similarity=0.459 Sum_probs=18.7
Q ss_pred cCCCCCcccchHHHHHHHHHHh
Q psy15984 11 EHLDVGYMQGMCDLVAPILVIL 32 (68)
Q Consensus 11 ~n~~igY~QGm~~l~a~ll~v~ 32 (68)
..|+.|.+||...-.+.++...
T Consensus 45 ~aPgggft~g~v~a~a~iL~~l 66 (162)
T COG2111 45 LAPGGGFTGGVVEAIAIILLLL 66 (162)
T ss_pred cCCCcchhhhhHHHHHHHHHHH
Confidence 4799999999999988877654
No 29
>PF08189 Meleagrin: Meleagrin/Cygnin family; InterPro: IPR012573 This family consists of meleagrin and cygnin basic peptides that are isolated from turkey and black swan respectively. Both peptides are low in molecular weight and contain three disulphide bonds with high concentrations of aromatic residues. These peptides show similarity to transferrins and probably play some vital role in avian eggs but the exact function is still unknown [].
Probab=25.76 E-value=30 Score=17.16 Aligned_cols=10 Identities=20% Similarity=0.381 Sum_probs=7.7
Q ss_pred cCCCCCcccc
Q psy15984 11 EHLDVGYMQG 20 (68)
Q Consensus 11 ~n~~igY~QG 20 (68)
+-|++|||..
T Consensus 5 ycpkiGYCS~ 14 (39)
T PF08189_consen 5 YCPKIGYCSS 14 (39)
T ss_pred hCcccceecc
Confidence 4689999864
No 30
>PLN02272 glyceraldehyde-3-phosphate dehydrogenase
Probab=25.28 E-value=27 Score=25.71 Aligned_cols=24 Identities=21% Similarity=0.400 Sum_probs=20.3
Q ss_pred hhhhhcCCCCCcccchHHHHHHHH
Q psy15984 6 VTYVWEHLDVGYMQGMCDLVAPIL 29 (68)
Q Consensus 6 ~~y~~~n~~igY~QGm~~l~a~ll 29 (68)
+.++||+.+.||..-|-|++..+.
T Consensus 392 Kv~~WYDNEwGys~R~~dl~~~~~ 415 (421)
T PLN02272 392 KLVSWYDNEWGYSNRVLDLIEHMA 415 (421)
T ss_pred EEEEEecCchhHHHHHHHHHHHHH
Confidence 457899999999999999887653
No 31
>PLN02237 glyceraldehyde-3-phosphate dehydrogenase B
Probab=23.64 E-value=30 Score=25.68 Aligned_cols=25 Identities=24% Similarity=0.405 Sum_probs=21.0
Q ss_pred hhhhhcCCCCCcccchHHHHHHHHH
Q psy15984 6 VTYVWEHLDVGYMQGMCDLVAPILV 30 (68)
Q Consensus 6 ~~y~~~n~~igY~QGm~~l~a~ll~ 30 (68)
..++||+.+.||.+-|-|++..+.-
T Consensus 386 Kv~aWYDNEwGys~R~~dl~~~~~~ 410 (442)
T PLN02237 386 KVVAWYDNEWGYSQRVVDLAHLVAA 410 (442)
T ss_pred EEEEEeCCchhHHHHHHHHHHHHHH
Confidence 3578999999999999999887643
No 32
>PF10557 Cullin_Nedd8: Cullin protein neddylation domain; InterPro: IPR019559 This is the neddylation site of cullin proteins, which are a family of structurally related proteins containing an evolutionarily conserved cullin domain. With the exception of APC2, each member of the cullin family is modified by Nedd8 and several cullins function in Ubiquitin-dependent proteolysis, a process in which the 26S proteasome recognises and subsequently degrades a target protein tagged with K48-linked poly-ubiquitin chains. Cullins are molecular scaffolds responsible for assembling the ROC1/Rbx1 RING-based E3 ubiquitin ligases, of which several play a direct role in tumorigenesis. Nedd8/Rub1 is a small ubiquitin-like protein, which was originally found to be conjugated to Cdc53, a cullin component of the SCF (Skp1-Cdc53/CUL1-F-box protein) E3 Ub ligase complex in Saccharomyces cerevisiae (Baker's yeast), and Nedd8 modification has now emerged as a regulatory pathway of fundamental importance for cell cycle control and for embryogenesis in metazoans. The only identified Nedd8 substrates are cullins. Neddylation results in covalent conjugation of a Nedd8 moiety onto a conserved cullin lysine residue []. ; GO: 0031625 ubiquitin protein ligase binding, 0006511 ubiquitin-dependent protein catabolic process, 0031461 cullin-RING ubiquitin ligase complex; PDB: 3RTR_G 3TDU_D 1LDJ_A 3TDZ_D 1LDK_B 1U6G_A 3O6B_J 3O2P_E 4A0K_A 2HYE_C ....
Probab=23.50 E-value=1.1e+02 Score=16.31 Aligned_cols=27 Identities=7% Similarity=0.297 Sum_probs=17.3
Q ss_pred HHHHHHHhhhcCCCCCchhHHHHhhhc
Q psy15984 41 CFCCLMDRMAANFPTTGGVMDNHFANM 67 (68)
Q Consensus 41 ~f~~lm~~~~~~y~~~~~g~~~~~~~l 67 (68)
++..+.+.+...|.++..-++.+++.|
T Consensus 28 L~~~v~~~l~~~f~~~~~~ik~~Ie~L 54 (68)
T PF10557_consen 28 LINEVIEELKKRFPPSVSDIKKRIESL 54 (68)
T ss_dssp HHHHHHHHTTTTS---HHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcCCCHHHHHHHHHHH
Confidence 455566667778888888888888765
No 33
>PLN03096 glyceraldehyde-3-phosphate dehydrogenase A; Provisional
Probab=23.44 E-value=30 Score=25.25 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=19.6
Q ss_pred hhhhhcCCCCCcccchHHHHHHH
Q psy15984 6 VTYVWEHLDVGYMQGMCDLVAPI 28 (68)
Q Consensus 6 ~~y~~~n~~igY~QGm~~l~a~l 28 (68)
..++||+.+.||.+-|-|++..+
T Consensus 368 Kv~~WYDNE~Gys~r~~dl~~~~ 390 (395)
T PLN03096 368 KVVAWYDNEWGYSQRVVDLADIV 390 (395)
T ss_pred EEEEEecCchhHHHHHHHHHHHH
Confidence 35889999999999999987654
No 34
>PRK07729 glyceraldehyde-3-phosphate dehydrogenase; Validated
Probab=22.21 E-value=28 Score=24.86 Aligned_cols=24 Identities=25% Similarity=0.430 Sum_probs=20.3
Q ss_pred hhhhhcCCCCCcccchHHHHHHHH
Q psy15984 6 VTYVWEHLDVGYMQGMCDLVAPIL 29 (68)
Q Consensus 6 ~~y~~~n~~igY~QGm~~l~a~ll 29 (68)
+.++||+.+.||..-|-|++..+.
T Consensus 308 K~~~WYDNE~Gys~r~~dl~~~~~ 331 (343)
T PRK07729 308 KVLAWYDNEWGYSCRVVDLVTLVA 331 (343)
T ss_pred EEEEEecCchHHHHHHHHHHHHHH
Confidence 457899999999999999887653
No 35
>PRK08955 glyceraldehyde-3-phosphate dehydrogenase; Validated
Probab=20.92 E-value=38 Score=23.99 Aligned_cols=23 Identities=22% Similarity=0.521 Sum_probs=19.5
Q ss_pred hhhhhcCCCCCcccchHHHHHHH
Q psy15984 6 VTYVWEHLDVGYMQGMCDLVAPI 28 (68)
Q Consensus 6 ~~y~~~n~~igY~QGm~~l~a~l 28 (68)
...+||+.+.||..-|-|++..+
T Consensus 308 k~~~WyDNE~gys~r~~dl~~~~ 330 (334)
T PRK08955 308 KLYAWYDNEWGYANRTAELARKV 330 (334)
T ss_pred EEEEEeCCchhHHHHHHHHHHHH
Confidence 45789999999999999998754
No 36
>PF07416 Crinivirus_P26: Crinivirus P26 protein; InterPro: IPR009985 This family consists of several Crinivirus P26 proteins which seem to be found exclusively in the Lettuce infectious yellows virus. The function of this family is unknown.
Probab=20.19 E-value=70 Score=20.86 Aligned_cols=15 Identities=20% Similarity=0.370 Sum_probs=10.9
Q ss_pred CchhHHHHHHHHHHh
Q psy15984 34 DESLTYSCFCCLMDR 48 (68)
Q Consensus 34 ~E~~aF~~f~~lm~~ 48 (68)
.-+++|||+--+++.
T Consensus 24 elsdtfwclmdfiss 38 (227)
T PF07416_consen 24 ELSDTFWCLMDFISS 38 (227)
T ss_pred HhhhhHHHHHHHhhh
Confidence 357999998766644
No 37
>PRK14562 haloacid dehalogenase superfamily protein; Provisional
Probab=20.02 E-value=1.5e+02 Score=19.44 Aligned_cols=52 Identities=10% Similarity=0.111 Sum_probs=30.5
Q ss_pred CcccchHHHHHHHHHHh-----cCchhHHHHHHHHHHhhhcCC----CCCc--hhHHHHhhhc
Q psy15984 16 GYMQGMCDLVAPILVIL-----DDESLTYSCFCCLMDRMAANF----PTTG--GVMDNHFANM 67 (68)
Q Consensus 16 gY~QGm~~l~a~ll~v~-----~~E~~aF~~f~~lm~~~~~~y----~~~~--~g~~~~~~~l 67 (68)
.|.+|+.|++|=+.... ..+.+.=+-...+|+.+-..| .++. +|+++++..+
T Consensus 113 dYLlGl~Dl~GEL~R~al~~l~~gd~~~~~~i~~fm~~ly~~~~~l~~~~~~~~~LRkK~D~~ 175 (204)
T PRK14562 113 AYLLGLADAIGELRRHILELLRKGEIEEAEKLLEIMEEIYEFLMTLDYPDAITPGLRRKQDVA 175 (204)
T ss_pred HHHhHHHHHHhHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHH
Confidence 59999999999887544 222232344556666653222 2222 5777776554
Done!