Query psy15988
Match_columns 718
No_of_seqs 95 out of 97
Neff 2.2
Searched_HMMs 29240
Date Fri Aug 16 18:06:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15988.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15988hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hkr_A Calcium release-activat 100.0 5.7E-79 1.9E-83 587.9 10.0 196 272-467 11-206 (214)
2 4hkr_A Calcium release-activat 100.0 6.9E-76 2.4E-80 566.5 9.8 194 475-716 5-198 (214)
3 1afo_A Glycophorin A; integral 46.5 25 0.00084 27.3 4.2 34 308-341 1-34 (40)
4 3mkt_A Multi antimicrobial ext 44.9 1.4E+02 0.0049 28.5 10.3 60 580-647 49-108 (460)
5 3rze_A Histamine H1 receptor, 44.5 2.1E+02 0.0072 27.1 12.7 72 623-695 122-203 (452)
6 3vw7_A Proteinase-activated re 40.0 2.6E+02 0.0088 26.8 11.5 24 623-646 134-157 (484)
7 3vw7_A Proteinase-activated re 32.6 25 0.00084 33.8 2.9 94 343-437 110-219 (484)
8 3uon_A Human M2 muscarinic ace 32.3 3.3E+02 0.011 25.8 13.8 70 624-694 138-217 (467)
9 3odu_A C-X-C chemokine recepto 26.5 1.5E+02 0.0051 28.6 7.2 22 625-646 162-183 (502)
10 4ea3_A Fusion protein of nocic 22.4 2.2E+02 0.0075 27.5 7.5 24 623-646 238-261 (434)
11 3uon_A Human M2 muscarinic ace 20.8 4.8E+02 0.017 24.7 9.4 68 370-438 141-218 (467)
12 1waz_A MERF; protein structure 20.3 97 0.0033 24.7 3.7 31 646-686 8-38 (46)
No 1
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=100.00 E-value=5.7e-79 Score=587.90 Aligned_cols=196 Identities=57% Similarity=0.960 Sum_probs=163.9
Q ss_pred ccchhhhhhhhhHHHHHhhhhhhhhhhhhhheeeeeeeecCCCCCCchhhhhhhhhHHHHHHHHHHHHHHHhhcccchhh
Q psy15988 272 SEGLVWRRLHMSRAKLKATATTSELLSGFAMVAMVELQINEPTNVPEWLFIMFAVCTTVLVAVHIFALMISTYLLPNIEA 351 (718)
Q Consensus 272 ~~~lsWRrl~LsRaKLKAsSrtSALLSGFAMvAMVEiQL~~~t~~P~~LlI~favcTtllvaVhl~aLMISTcILPnIea 351 (718)
+++|+|||++++||||||+|+|||||||||||||||+|+++++++|++++++||+||+++|+||++|+||||||||||||
T Consensus 11 ~~~l~~R~l~ls~aqLKA~S~lSALLaGFAMVAmVE~ql~~~~~~p~~LLi~fav~Ttllv~vml~AlMIsTcILPnIea 90 (214)
T 4hkr_A 11 PTYLSWRKLQLSRAKLKASSKTSALLSGFAMVAMVEVQLDHDTNVPPGMLIAFAICTTLLVAVHMLALMISTCILPNIET 90 (214)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhccceeeEEEEeccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhheeeccchhHHHHHhhhhhhhhhhhhhhhhhhhhh
Q psy15988 352 ISKLQSTKLVSESPHERMRGFVELAWAFSTVLGLFLFLVEVAILCWVKFWDYSLRAAIAATIIVIPVLIIFVVFVVHFYH 431 (718)
Q Consensus 352 v~nvh~ls~v~eSPHerm~~~iE~aW~FST~lGl~LFLvEIaLL~WVKF~~~~~~AA~ast~iliPv~ivFv~Fa~HFYr 431 (718)
++|+|+++.++||||+|||+|||.||+|||++|++|||+||+++||||||+++..|||++|+||+||+|+|++||+||||
T Consensus 91 v~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall~WVKF~~~~~~aa~~~t~vliPv~i~F~~Fa~hFYr 170 (214)
T 4hkr_A 91 VSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAIHFYR 170 (214)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheEEeecCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhhHHHHHHHHhhhcCCcccccccc
Q psy15988 432 NVVKYKCKTSISDMKELEDIKKKLDAGHVLYKNHSR 467 (718)
Q Consensus 432 sLv~hK~e~~~~~i~eLe~~~~qLDaGHVlY~~w~d 467 (718)
+|++||||+++++|+|||++|+|||+|++++.+-.+
T Consensus 171 sL~~hk~e~~~~~i~el~~~~~~l~~~~~~~~~~~~ 206 (214)
T 4hkr_A 171 SLVSHKYEVTVSGIRELEMLKEQMEQDHLEHHNNIR 206 (214)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHTCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 999999999999999999999999999998765444
No 2
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=100.00 E-value=6.9e-76 Score=566.47 Aligned_cols=194 Identities=57% Similarity=0.957 Sum_probs=158.9
Q ss_pred ccCcCCcccchhHHhhhhHHHHHhhhhhhhhhhccceeeeeeeeecCCCCCChhHHHHhhhhhhhhhhHHHHHHHHhhcc
Q psy15988 475 EELPEDSEGLVWRRLHMSRAKLKATATTSELLSGFAMVAMVELQINEPTNVPEWLFIMFAVCTTVLVAVHIFALMISTYL 554 (718)
Q Consensus 475 ~~~qe~s~~lsWRrl~LSRaKLKAsSrtSALLSGFAMVAmVEiql~~~t~~P~~l~iafAv~tti~~~v~~~AlM~~t~i 554 (718)
+.++|.+++++|||++++||||||+|+|||||||||||||||+|+++++++|
T Consensus 5 ~~~~h~~~~l~~R~l~ls~aqLKA~S~lSALLaGFAMVAmVE~ql~~~~~~p---------------------------- 56 (214)
T 4hkr_A 5 GEDLHSPTYLSWRKLQLSRAKLKASSKTSALLSGFAMVAMVEVQLDHDTNVP---------------------------- 56 (214)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------------------------------
T ss_pred cccccChhhccHHHHHHHHHHHHHHHHHHHHHhccceeeEEEEeccCCCCCC----------------------------
Confidence 3556788999999999999999999999999999999999999998777666
Q ss_pred CCCCchhhhhhhcCCCCCCcchhhHhhhhhhHHHHHHHHHHHHHHhhcchhhhhhhcccccCCCCCChhhhhhhhhhhhH
Q psy15988 555 LPGNDVAMVELQINEPTNVPEWLFIMFAVCTTVLVAVHIFALMISTYLLPNIEAISKLQSTKLVSESPHERMRGFVELAW 634 (718)
Q Consensus 555 ~P~~~vamVE~Q~~e~t~~P~~Lli~Fav~TTvLVAVHlfALMISTcILPnIeAvsnl~nl~~v~esPHeRm~~yIElAW 634 (718)
++|+++||+|||++|+||++|+||||||||||||++|+||+++++||||+|||.|||+||
T Consensus 57 --------------------~~LLi~fav~Ttllv~vml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW 116 (214)
T 4hkr_A 57 --------------------PGMLIAFAICTTLLVAVHMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAW 116 (214)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHHHHHTTTC----------------CHHHHHHHHHHHH
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHH
Confidence 456999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhheeeecccchhHHHHHHHhhHhHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhhccC
Q psy15988 635 AFSTVLGLFLFLVEVAILCWVKFWDYSLRAAIAATIIVIPVLIIFVVFVVHFYHNVVKYKCKTSISDMKELEDIKKKLDA 714 (718)
Q Consensus 635 ~FSTvlGl~LFLaEvall~WVKF~~~s~~AAiastiiliPv~iIFvvFa~hFYr~Lv~hk~~~~~~~ieELe~~k~~ld~ 714 (718)
+|||++|++|||+|++++||||||+++..|||++|++++||+++|++||+||||+|++||||+++|+|+|||++|+|||+
T Consensus 117 ~fST~lGi~LFL~evall~WVKF~~~~~~aa~~~t~vliPv~i~F~~Fa~hFYrsL~~hk~e~~~~~i~el~~~~~~l~~ 196 (214)
T 4hkr_A 117 AFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAIHFYRSLVSHKYEVTVSGIRELEMLKEQMEQ 196 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhheEEeecCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CC
Q psy15988 715 GH 716 (718)
Q Consensus 715 ~~ 716 (718)
|+
T Consensus 197 ~~ 198 (214)
T 4hkr_A 197 DH 198 (214)
T ss_dssp HH
T ss_pred cc
Confidence 65
No 3
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=46.52 E-value=25 Score=27.34 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=26.0
Q ss_pred eeecCCCCCCchhhhhhhhhHHHHHHHHHHHHHH
Q psy15988 308 LQINEPTNVPEWLFIMFAVCTTVLVAVHIFALMI 341 (718)
Q Consensus 308 iQL~~~t~~P~~LlI~favcTtllvaVhl~aLMI 341 (718)
+|+..+.++|+-.+|+|++++-+.-..-+++..|
T Consensus 1 ~ql~h~fs~p~i~lII~~vmaGiIG~IllI~y~I 34 (40)
T 1afo_A 1 VQLAHHFSEPEITLIIFGVMAGVIGTILLISYGI 34 (40)
T ss_dssp CCCSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999999999998877665554444444
No 4
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=44.85 E-value=1.4e+02 Score=28.51 Aligned_cols=60 Identities=10% Similarity=0.211 Sum_probs=39.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhcchhhhhhhcccccCCCCCChhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy15988 580 MFAVCTTVLVAVHIFALMISTYLLPNIEAISKLQSTKLVSESPHERMRGFVELAWAFSTVLGLFLFLV 647 (718)
Q Consensus 580 ~Fav~TTvLVAVHlfALMISTcILPnIeAvsnl~nl~~v~esPHeRm~~yIElAW~FSTvlGl~LFLa 647 (718)
+++.++.+...+-.++..+++.+-|.+-. ..++.-.++.+.++..+..++.++|+++.+.
T Consensus 49 ~~~~~~~i~~~~~~~~~g~~~~~~~~is~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (460)
T 3mkt_A 49 AVSIAASIWLPSILFGVGLLMALVPVVAQ--------LNGAGRQHKIPFEVHQGLILALLVSVPIIAV 108 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGCTT--------TTSSSSTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666665444555666666766666322 2334456788888888888888888877665
No 5
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=44.51 E-value=2.1e+02 Score=27.05 Aligned_cols=72 Identities=18% Similarity=0.234 Sum_probs=37.4
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHH---------HHHhheeeecccchh-HHHHHHHhhHhHHHHHHHHHHHHHHhhhh
Q psy15988 623 HERMRGFVELAWAFSTVLGLFLFLVE---------VAILCWVKFWDYSLR-AAIAATIIVIPVLIIFVVFVVHFYHNVVK 692 (718)
Q Consensus 623 HeRm~~yIElAW~FSTvlGl~LFLaE---------vall~WVKF~~~s~~-AAiastiiliPv~iIFvvFa~hFYr~Lv~ 692 (718)
..|....|-..|+++.++.+.+|... ....|+..+...... ........++|++++.+ +-++.++.+-+
T Consensus 122 ~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~p~~ii~~-~y~~I~~~l~~ 200 (452)
T 3rze_A 122 KTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYDVTWFKVMTAIINFYLPTLLMLW-FYAKIYKAVRQ 200 (452)
T ss_dssp HHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSCTTCHHHHHHHHHHHTHHHHHHHHH-HHHHHHHHSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCCcccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 45567778889999988876644210 112233333322221 22333445667655544 44555666655
Q ss_pred hhh
Q psy15988 693 YKC 695 (718)
Q Consensus 693 hk~ 695 (718)
|..
T Consensus 201 ~~~ 203 (452)
T 3rze_A 201 HCN 203 (452)
T ss_dssp CCC
T ss_pred hcc
Confidence 543
No 6
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=39.99 E-value=2.6e+02 Score=26.80 Aligned_cols=24 Identities=21% Similarity=0.119 Sum_probs=18.0
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHH
Q psy15988 623 HERMRGFVELAWAFSTVLGLFLFL 646 (718)
Q Consensus 623 HeRm~~yIElAW~FSTvlGl~LFL 646 (718)
..|....|-..|+++.++++..++
T Consensus 134 ~~~~~~~i~~~W~~s~~~~~p~~~ 157 (484)
T 3vw7_A 134 LGRASFTCLAIWALAIAGVVPLLL 157 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677788899999888776654
No 7
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=32.57 E-value=25 Score=33.84 Aligned_cols=94 Identities=16% Similarity=0.129 Sum_probs=42.7
Q ss_pred hhcccchhhhhcc-cccccccCCchhhhhhHHHHHHHHHHHHHHHHHHHHH--------HHhhheeeccch-------hH
Q psy15988 343 TYLLPNIEAISKL-QSTKLVSESPHERMRGFVELAWAFSTVLGLFLFLVEV--------AILCWVKFWDYS-------LR 406 (718)
Q Consensus 343 TcILPnIeav~nv-h~ls~v~eSPHerm~~~iE~aW~FST~lGl~LFLvEI--------aLL~WVKF~~~~-------~~ 406 (718)
+..+.++||.--| +-+....--...+....|=..|++|.++++..++.-- ...|+..+.... +.
T Consensus 110 ~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 189 (484)
T 3vw7_A 110 LMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVLSETLLEGYYAYYF 189 (484)
T ss_dssp HHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSCSSCSSCHHHHHHH
T ss_pred HHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccCCccchhHHHHHHH
Confidence 3444566773332 2222211112223355667788888766554443100 011222221111 23
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhhhhcccccc
Q psy15988 407 AAIAATIIVIPVLIIFVVFVVHFYHNVVKYK 437 (718)
Q Consensus 407 AA~ast~iliPv~ivFv~Fa~HFYrsLv~hK 437 (718)
........++|++++.+. .+..++.+-+|+
T Consensus 190 ~~~~~~~~~~P~~ii~~~-Y~~I~~~l~~~~ 219 (484)
T 3vw7_A 190 SAFSAVFFFVPLIISTVC-YVSIIRCLSSSA 219 (484)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHTTSCC
T ss_pred HHHHHHHHhHHHHHHHHH-HHHHHHHHhHhh
Confidence 334456677887766544 445666666655
No 8
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=32.33 E-value=3.3e+02 Score=25.81 Aligned_cols=70 Identities=20% Similarity=0.309 Sum_probs=37.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHH---------hheeeecccc-hhHHHHHHHhhHhHHHHHHHHHHHHHHhhhhh
Q psy15988 624 ERMRGFVELAWAFSTVLGLFLFLVEVAI---------LCWVKFWDYS-LRAAIAATIIVIPVLIIFVVFVVHFYHNVVKY 693 (718)
Q Consensus 624 eRm~~yIElAW~FSTvlGl~LFLaEval---------l~WVKF~~~s-~~AAiastiiliPv~iIFvvFa~hFYr~Lv~h 693 (718)
.|....|-..|+++.++++..++.--.. .|+..+.... ....+.....++|++++.+ +-++.++.+-+|
T Consensus 138 ~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~p~~ii~~-~y~~I~~~l~~~ 216 (467)
T 3uon_A 138 KMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTFGTAIAAFYLPVIIMTV-LYWHISRASKSR 216 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGGSHHHHHHHHHHHTHHHHHHHHH-HHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCcchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 4556778889999999888766542221 1443333221 1122333445667766544 344555555554
Q ss_pred h
Q psy15988 694 K 694 (718)
Q Consensus 694 k 694 (718)
.
T Consensus 217 ~ 217 (467)
T 3uon_A 217 I 217 (467)
T ss_dssp C
T ss_pred h
Confidence 3
No 9
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=26.52 E-value=1.5e+02 Score=28.61 Aligned_cols=22 Identities=14% Similarity=0.131 Sum_probs=16.7
Q ss_pred hhhhhhhhhHHHHHHHHHHHHH
Q psy15988 625 RMRGFVELAWAFSTVLGLFLFL 646 (718)
Q Consensus 625 Rm~~yIElAW~FSTvlGl~LFL 646 (718)
|....|-.+|+++.++++..|+
T Consensus 162 ~~~~~i~~~W~~~~~~~~~~~~ 183 (502)
T 3odu_A 162 AEKVVYVGVWIPALLLTIPDFI 183 (502)
T ss_dssp HHTHHHHHTHHHHHHTTHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHH
Confidence 3356677899999999887665
No 10
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=22.37 E-value=2.2e+02 Score=27.53 Aligned_cols=24 Identities=17% Similarity=0.436 Sum_probs=18.1
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHH
Q psy15988 623 HERMRGFVELAWAFSTVLGLFLFL 646 (718)
Q Consensus 623 HeRm~~yIElAW~FSTvlGl~LFL 646 (718)
..|....+-..|+++.++++..++
T Consensus 238 ~~~~~~~i~~~W~~s~~~~~p~~~ 261 (434)
T 4ea3_A 238 SSKAQAVNVAIWALASVVGVPVAI 261 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHhhhhhhhHHHHHHhhHhe
Confidence 345667788899999988876654
No 11
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=20.85 E-value=4.8e+02 Score=24.70 Aligned_cols=68 Identities=21% Similarity=0.315 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH---------hhheeeccch-hHHHHHhhhhhhhhhhhhhhhhhhhhhccccccc
Q psy15988 370 RGFVELAWAFSTVLGLFLFLVEVAI---------LCWVKFWDYS-LRAAIAATIIVIPVLIIFVVFVVHFYHNVVKYKC 438 (718)
Q Consensus 370 ~~~iE~aW~FST~lGl~LFLvEIaL---------L~WVKF~~~~-~~AA~ast~iliPv~ivFv~Fa~HFYrsLv~hK~ 438 (718)
...|=..|+++.++.+..++.--.. .|+..+.... +.........++|++++.+ +.++.++.+-+|+.
T Consensus 141 ~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~p~~ii~~-~y~~I~~~l~~~~~ 218 (467)
T 3uon_A 141 GMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTFGTAIAAFYLPVIIMTV-LYWHISRASKSRIN 218 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGGSHHHHHHHHHHHTHHHHHHHHH-HHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCcchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhh
Confidence 4567778988887766554432111 1333332221 2333444556677766544 44566666666653
No 12
>1waz_A MERF; protein structure, residual dipolar coupling, polytopic membrane protein, transport protein, antibiotic resistance; NMR {Morganella morganii}
Probab=20.31 E-value=97 Score=24.68 Aligned_cols=31 Identities=26% Similarity=0.484 Sum_probs=25.1
Q ss_pred HHHHHHhheeeecccchhHHHHHHHhhHhHHHHHHHHHHHH
Q psy15988 646 LVEVAILCWVKFWDYSLRAAIAATIIVIPVLIIFVVFVVHF 686 (718)
Q Consensus 646 LaEvall~WVKF~~~s~~AAiastiiliPv~iIFvvFa~hF 686 (718)
+.-+++-.|+.+.|+- ++|.+++|+...++=
T Consensus 8 ~g~vGLsa~vgyLDyV----------LlPaLa~Fi~lt~ya 38 (46)
T 1waz_A 8 LGVVGLSALTGYLDYV----------LLPALAIFIGLTIYA 38 (46)
T ss_dssp HHHHHHHHCCSCCCCC----------SCCHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHH----------HHHHHHHHHHHHHHH
Confidence 4567788888888875 789999999988763
Done!