BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy15991
         (393 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1M4U|L Chain L, Crystal Structure Of Bone Morphogenetic Protein-7 (bmp-7)
           In Complex With The Secreted Antagonist Noggin
 pdb|1LX5|A Chain A, Crystal Structure Of The Bmp7ACTRII EXTRACELLULAR DOMAIN
           COMPLEX
 pdb|1LXI|A Chain A, Refinement Of Bmp7 Crystal Structure
 pdb|1BMP|A Chain A, Bone Morphogenetic Protein-7
          Length = 139

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 5/46 (10%)

Query: 303 MKEAAYNSHS-----CSIQTLYVNFRDLEWQDWIIAPDGYGAFYCK 343
           M   A NS S     C    LYV+FRDL WQDWIIAP+GY A+YC+
Sbjct: 23  MANVAENSSSDQRQACKKHELYVSFRDLGWQDWIIAPEGYAAYYCE 68


>pdb|2R53|A Chain A, Crystal Structure Analysis Of Bone Morphogenetic Protein-6
           Variant B2 (b2-bmp-6)
 pdb|2R53|B Chain B, Crystal Structure Analysis Of Bone Morphogenetic Protein-6
           Variant B2 (b2-bmp-6)
          Length = 116

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/31 (64%), Positives = 23/31 (74%)

Query: 312 SCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           +C    LYV+F+DL WQDWIIAP GY A YC
Sbjct: 14  ACRKHELYVSFQDLGWQDWIIAPKGYAANYC 44


>pdb|2QCW|A Chain A, Crystal Structure Of Bone Morphogenetic Protein-6 (Bmp-6)
 pdb|2QCW|B Chain B, Crystal Structure Of Bone Morphogenetic Protein-6 (Bmp-6)
          Length = 132

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 23/31 (74%)

Query: 312 SCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           +C    LYV+F+DL WQDWIIAP GY A YC
Sbjct: 30  ACRKHELYVSFQDLGWQDWIIAPKGYAANYC 60


>pdb|2R52|A Chain A, Crystal Structure Analysis Of Bone Morphogenetic Protein-6
           (Bmp-6)
 pdb|2R52|B Chain B, Crystal Structure Analysis Of Bone Morphogenetic Protein-6
           (Bmp-6)
          Length = 143

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 23/31 (74%)

Query: 312 SCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           +C    LYV+F+DL WQDWIIAP GY A YC
Sbjct: 41  ACRKHELYVSFQDLGWQDWIIAPKGYAANYC 71


>pdb|1ES7|A Chain A, Complex Between Bmp-2 And Two Bmp Receptor Ia Ectodomains
 pdb|1ES7|C Chain C, Complex Between Bmp-2 And Two Bmp Receptor Ia Ectodomains
 pdb|2QJ9|B Chain B, Crystal Structure Analysis Of Bmp-2 In Complex With
           Bmpr-Ia Variant B1
 pdb|2QJ9|A Chain A, Crystal Structure Analysis Of Bmp-2 In Complex With
           Bmpr-Ia Variant B1
 pdb|2QJA|A Chain A, Crystal Structure Analysis Of Bmp-2 In Complex With
           Bmpr-ia Variant B12
 pdb|2QJA|B Chain B, Crystal Structure Analysis Of Bmp-2 In Complex With
           Bmpr-ia Variant B12
 pdb|2QJB|A Chain A, Crystal Structure Analysis Of Bmp-2 In Complex With
           Bmpr-ia Variant Ia/ib
 pdb|2QJB|B Chain B, Crystal Structure Analysis Of Bmp-2 In Complex With
           Bmpr-ia Variant Ia/ib
          Length = 116

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/31 (61%), Positives = 22/31 (70%)

Query: 312 SCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           SC    LYV+F D+ W DWI+AP GY AFYC
Sbjct: 15  SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYC 45


>pdb|1REU|A Chain A, Structure Of The Bone Morphogenetic Protein 2 Mutant L51p
          Length = 103

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/31 (61%), Positives = 22/31 (70%)

Query: 312 SCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           SC    LYV+F D+ W DWI+AP GY AFYC
Sbjct: 2   SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYC 32


>pdb|3BMP|A Chain A, Human Bone Morphogenetic Protein-2 (Bmp-2)
 pdb|1REW|A Chain A, Structural Refinement Of The Complex Of Bone Morphogenetic
           Protein 2 And Its Type Ia Receptor
 pdb|1REW|B Chain B, Structural Refinement Of The Complex Of Bone Morphogenetic
           Protein 2 And Its Type Ia Receptor
 pdb|2GOO|A Chain A, Ternary Complex Of Bmp-2 Bound To Bmpr-Ia-Ecd And
           Actrii-Ecd
 pdb|2GOO|D Chain D, Ternary Complex Of Bmp-2 Bound To Bmpr-Ia-Ecd And
           Actrii-Ecd
 pdb|2H62|A Chain A, Crystal Structure Of A Ternary Ligand-Receptor Complex Of
           Bmp-2
 pdb|2H62|B Chain B, Crystal Structure Of A Ternary Ligand-Receptor Complex Of
           Bmp-2
          Length = 114

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/31 (61%), Positives = 22/31 (70%)

Query: 312 SCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           SC    LYV+F D+ W DWI+AP GY AFYC
Sbjct: 13  SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYC 43


>pdb|2H64|A Chain A, Crystal Structure Of A Ternary Ligand-Receptor Complex Of
           Bmp-2
          Length = 114

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/31 (61%), Positives = 22/31 (70%)

Query: 312 SCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           SC    LYV+F D+ W DWI+AP GY AFYC
Sbjct: 13  SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYC 43


>pdb|3BK3|A Chain A, Crystal Structure Of The Complex Of Bmp-2 And The First
           Von Willebrand Domain Type C Of Crossveinless-2
 pdb|3BK3|B Chain B, Crystal Structure Of The Complex Of Bmp-2 And The First
           Von Willebrand Domain Type C Of Crossveinless-2
          Length = 114

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/31 (58%), Positives = 21/31 (67%)

Query: 312 SCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           SC    LYV+F D+ W DWI+AP GY A YC
Sbjct: 13  SCKRHPLYVDFSDVGWNDWIVAPPGYHAMYC 43


>pdb|1WAQ|A Chain A, Crystal Structure Of Human Growth And Differentiation
           Factor 5 (Gdf-5)
 pdb|3EVS|B Chain B, Crystal Structure Of The Gdf-5:bmp Receptor Ib Complex
          Length = 117

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)

Query: 313 CSIQTLYVNFRDLEWQDWIIAPDGYGAFYCK 343
           CS + L+VNF+D+ W DWIIAP  Y AF+C+
Sbjct: 16  CSRKALHVNFKDMGWDDWIIAPLEYEAFHCE 46


>pdb|2BHK|A Chain A, Crystal Structure Of Human Growth And Differentiation
           Factor 5 (Gdf5)
          Length = 120

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)

Query: 313 CSIQTLYVNFRDLEWQDWIIAPDGYGAFYCK 343
           CS + L+VNF+D+ W DWIIAP  Y AF+C+
Sbjct: 19  CSRKALHVNFKDMGWDDWIIAPLEYEAFHCE 49


>pdb|3QB4|A Chain A, Crystal Structure Of A Tgf-Beta Ligand-Receptor Complex
 pdb|3QB4|C Chain C, Crystal Structure Of A Tgf-Beta Ligand-Receptor Complex
          Length = 117

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)

Query: 313 CSIQTLYVNFRDLEWQDWIIAPDGYGAFYCK 343
           CS + L+VNF+D+ W DWIIAP  Y AF+C+
Sbjct: 16  CSRKALHVNFKDMGWDDWIIAPLEYEAFHCE 46


>pdb|1NYS|B Chain B, Crystal Structure Of Activin A Bound To The Ecd Of Actriib
           P41
 pdb|1NYS|D Chain D, Crystal Structure Of Activin A Bound To The Ecd Of Actriib
           P41
 pdb|1NYU|B Chain B, Crystal Structure Of Activin A Bound To The Ecd Of Actriib
 pdb|1NYU|D Chain D, Crystal Structure Of Activin A Bound To The Ecd Of Actriib
 pdb|1S4Y|B Chain B, Crystal Structure Of The ActivinACTRIIB EXTRACELLULAR
           DOMAIN
 pdb|1S4Y|D Chain D, Crystal Structure Of The ActivinACTRIIB EXTRACELLULAR
           DOMAIN
 pdb|2B0U|A Chain A, The Structure Of The Follistatin:activin Complex
 pdb|2B0U|B Chain B, The Structure Of The Follistatin:activin Complex
 pdb|2ARP|A Chain A, Activin A In Complex With Fs12 Fragment Of Follistatin
 pdb|2ARV|A Chain A, Structure Of Human Activin A
 pdb|2ARV|B Chain B, Structure Of Human Activin A
 pdb|2P6A|A Chain A, The Structure Of The Activin:follistatin 315 Complex
 pdb|2P6A|B Chain B, The Structure Of The Activin:follistatin 315 Complex
 pdb|3B4V|A Chain A, X-Ray Structure Of Activin In Complex With Fstl3
 pdb|3B4V|B Chain B, X-Ray Structure Of Activin In Complex With Fstl3
 pdb|3B4V|E Chain E, X-Ray Structure Of Activin In Complex With Fstl3
 pdb|3B4V|F Chain F, X-Ray Structure Of Activin In Complex With Fstl3
          Length = 116

 Score = 46.6 bits (109), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 313 CSIQTLYVNFRDLEWQDWIIAPDGYGAFYCK 343
           C  +  +V+F+D+ W DWIIAP GY A YC+
Sbjct: 11  CCKKQFFVSFKDIGWNDWIIAPSGYHANYCE 41


>pdb|1ZKZ|A Chain A, Crystal Structure Of Bmp9
 pdb|4FAO|A Chain A, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|B Chain B, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|G Chain G, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|H Chain H, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|M Chain M, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|N Chain N, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|S Chain S, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|T Chain T, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|AA Chain a, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|BB Chain b, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|GG Chain g, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
 pdb|4FAO|HH Chain h, Specificity And Structure Of A High Affinity Activin-Like
           1 (Alk1) Signaling Complex
          Length = 110

 Score = 42.7 bits (99), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 306 AAYNSHSCSIQTLYVNFRDLEWQDWIIAPDGYGAFYCK 343
           A   SH C   +L VNF D+ W  WIIAP  Y A+ CK
Sbjct: 2   AGAGSH-CQKTSLRVNFEDIGWDSWIIAPKEYEAYECK 38


>pdb|3RJR|A Chain A, Crystal Structure Of Pro-tgf Beta 1
 pdb|3RJR|B Chain B, Crystal Structure Of Pro-tgf Beta 1
 pdb|3RJR|C Chain C, Crystal Structure Of Pro-tgf Beta 1
 pdb|3RJR|D Chain D, Crystal Structure Of Pro-tgf Beta 1
          Length = 363

 Score = 39.3 bits (90), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 32/180 (17%)

Query: 170 VSIYQVLVDGELEYV-DSVNTTAGSEGWMLFNVTGPLVSWVAIPHSNKGLYLSVQ----P 224
           V +YQ        Y+ + +   + S  W+ F+VTG +  W+    + +G  LS       
Sbjct: 141 VELYQKYSQDSWRYLSNRLLAPSDSPEWLSFDVTGVVRQWLTRREAIEGFRLSAHCSCDS 200

Query: 225 REKPIH-EIRTEDIGIVASKVMHLEEKQPFMVAFFKSAHGGITVRPRSRRIRETTKSRKR 283
           ++  +H EI   + G            +PF++                 R +    SR R
Sbjct: 201 KDNTLHVEINGFNSGRRGDLATIHGMNRPFLLLMATPLE----------RAQHLHSSRHR 250

Query: 284 KSMTETSNYRNPYTGFSDSMKEAAYNSHSCSIQTLYVNFR-DLEWQDWIIAPDGYGAFYC 342
           +++   +NY      FS + K       +C ++ LY++FR DL W+ WI  P GY A +C
Sbjct: 251 RALD--TNY-----CFSSTEK-------NCCVRQLYIDFRKDLGWK-WIHEPKGYHANFC 295


>pdb|2QCQ|A Chain A, Crystal Structure Of Bone Morphogenetic Protein-3 (Bmp-3)
 pdb|2QCQ|B Chain B, Crystal Structure Of Bone Morphogenetic Protein-3 (Bmp-3)
          Length = 110

 Score = 38.1 bits (87), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 22/32 (68%)

Query: 311 HSCSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
            +C+ + L V+F D+ W +WII+P  + A+YC
Sbjct: 6   RNCARRYLKVDFADIGWSEWIISPKSFDAYYC 37


>pdb|1TFG|A Chain A, An Unusual Feature Revealed By The Crystal Structure At
           2.2 Angstroms Resolution Of Human Transforming Growth
           Factor-Beta2
 pdb|2TGI|A Chain A, Crystal Structure Of Transforming Growth Factor-Beta2: An
           Unusual Fold For The Superfamily
          Length = 112

 Score = 35.4 bits (80), Expect = 0.048,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)

Query: 312 SCSIQTLYVNF-RDLEWQDWIIAPDGYGAFYC 342
           +C ++ LY++F RDL W+ WI  P GY A +C
Sbjct: 14  NCCLRPLYIDFKRDLGWK-WIHEPKGYNANFC 44


>pdb|1KLD|A Chain A, Solution Structure Of Tgf-B1, Nmr, Models 18-33 Of 33
           Structures
 pdb|1KLD|B Chain B, Solution Structure Of Tgf-B1, Nmr, Models 18-33 Of 33
           Structures
 pdb|1KLC|A Chain A, Solution Structure Of Tgf-B1, Nmr, Minimized Average
           Structure
 pdb|1KLC|B Chain B, Solution Structure Of Tgf-B1, Nmr, Minimized Average
           Structure
 pdb|1KLA|A Chain A, Solution Structure Of Tgf-B1, Nmr, Models 1-17 Of 33
           Structures
 pdb|1KLA|B Chain B, Solution Structure Of Tgf-B1, Nmr, Models 1-17 Of 33
           Structures
 pdb|3KFD|A Chain A, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand
           Re And Receptor Recruitment In The Superfamily
 pdb|3KFD|B Chain B, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand
           Re And Receptor Recruitment In The Superfamily
 pdb|3KFD|C Chain C, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand
           Re And Receptor Recruitment In The Superfamily
 pdb|3KFD|D Chain D, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand
           Re And Receptor Recruitment In The Superfamily
          Length = 112

 Score = 35.4 bits (80), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)

Query: 312 SCSIQTLYVNFR-DLEWQDWIIAPDGYGAFYC 342
           +C ++ LY++FR DL W+ WI  P GY A +C
Sbjct: 14  NCCVRQLYIDFRKDLGWK-WIHEPKGYHANFC 44


>pdb|1KTZ|A Chain A, Crystal Structure Of The Human Tgf-Beta Type Ii Receptor
           Extracellular Domain In Complex With Tgf-Beta3
 pdb|1TGJ|A Chain A, Human Transforming Growth Factor-beta 3, Crystallized From
           Dioxane
 pdb|1TGK|A Chain A, Human Transforming Growth Factor Beta 3, Crystallized From
           Peg 4000
 pdb|2PJY|A Chain A, Structural Basis For Cooperative Assembly Of The Tgf-Beta
           Signaling Complex
 pdb|3EO1|C Chain C, Structure Of The Fab Fragment Of Gc-1008 In Complex With
           Transforming Growth Factor-Beta 3
 pdb|3EO1|F Chain F, Structure Of The Fab Fragment Of Gc-1008 In Complex With
           Transforming Growth Factor-Beta 3
 pdb|3EO1|I Chain I, Structure Of The Fab Fragment Of Gc-1008 In Complex With
           Transforming Growth Factor-Beta 3
 pdb|3EO1|L Chain L, Structure Of The Fab Fragment Of Gc-1008 In Complex With
           Transforming Growth Factor-Beta 3
          Length = 112

 Score = 34.3 bits (77), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)

Query: 312 SCSIQTLYVNFR-DLEWQDWIIAPDGYGAFYC 342
           +C ++ LY++FR DL W+ W+  P GY A +C
Sbjct: 14  NCCVRPLYIDFRQDLGWK-WVHEPKGYYANFC 44


>pdb|3HH2|A Chain A, Crystal Structure Of The Myostatin:follistatin 288 Complex
 pdb|3HH2|B Chain B, Crystal Structure Of The Myostatin:follistatin 288 Complex
 pdb|3SEK|B Chain B, Crystal Structure Of The Myostatin:follistatin-Like 3
           Complex
          Length = 109

 Score = 32.0 bits (71), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 313 CSIQTLYVNFRDLEWQDWIIAPDGYGAFYC 342
           C    L V+F    W DWIIAP  Y A YC
Sbjct: 15  CCRYPLTVDFEAFGW-DWIIAPKRYKANYC 43


>pdb|3V7A|G Chain G, Structural Basis For Broad Detection Of Genogroup Ii
           Noroviruses By A Monoclonal Antibody That Binds To A
           Site Occluded In The Viral Particle
 pdb|3V7A|H Chain H, Structural Basis For Broad Detection Of Genogroup Ii
           Noroviruses By A Monoclonal Antibody That Binds To A
           Site Occluded In The Viral Particle
          Length = 215

 Score = 28.9 bits (63), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 332 IAPDGYGAFYCKQKYNSDPFRVNYENIPEYKRFLEAKRNLQNVPPKPQSL 381
           + P+ +G++YC+  Y S P+        E KR  +A   +   PP  + L
Sbjct: 78  LQPEDFGSYYCQHHYGSPPWTFGGGTKLEIKR-ADAAPTVSIFPPSSEQL 126


>pdb|4FE7|A Chain A, Structure Of Xylose-binding Transcription Activator Xylr
          Length = 412

 Score = 28.1 bits (61), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 228 PIHEIRTEDIGIVASKVMHLEEKQPFMVAFF 258
           P+H I T++  +V S  +HL+EK     AF+
Sbjct: 115 PVHYIATDNYALVESAFLHLKEKGVNRFAFY 145


>pdb|4FE4|A Chain A, Crystal Structure Of Apo E. Coli Xylr
 pdb|4FE4|B Chain B, Crystal Structure Of Apo E. Coli Xylr
 pdb|4FE4|C Chain C, Crystal Structure Of Apo E. Coli Xylr
          Length = 392

 Score = 28.1 bits (61), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 228 PIHEIRTEDIGIVASKVMHLEEKQPFMVAFF 258
           P+H I T++  +V S  +HL+EK     AF+
Sbjct: 95  PVHYIATDNYALVESAFLHLKEKGVNRFAFY 125


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.318    0.133    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,559,402
Number of Sequences: 62578
Number of extensions: 468660
Number of successful extensions: 1165
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1142
Number of HSP's gapped (non-prelim): 25
length of query: 393
length of database: 14,973,337
effective HSP length: 101
effective length of query: 292
effective length of database: 8,652,959
effective search space: 2526664028
effective search space used: 2526664028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)