Query psy160
Match_columns 346
No_of_seqs 283 out of 3143
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 18:22:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy160.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/160hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 3.7E-43 1.3E-47 357.3 28.9 268 1-278 460-747 (780)
2 3uem_A Protein disulfide-isome 100.0 6.8E-37 2.3E-41 284.3 29.4 278 2-295 41-355 (361)
3 3f8u_A Protein disulfide-isome 100.0 2.8E-36 9.5E-41 290.7 28.9 280 1-295 26-459 (481)
4 3apo_A DNAJ homolog subfamily 100.0 6.2E-37 2.1E-41 311.5 22.6 290 1-307 356-666 (780)
5 2b5e_A Protein disulfide-isome 100.0 2.8E-35 9.5E-40 285.2 27.0 283 1-295 36-465 (504)
6 1sji_A Calsequestrin 2, calseq 100.0 2.3E-34 7.7E-39 266.2 27.9 257 1-270 33-315 (350)
7 3us3_A Calsequestrin-1; calciu 100.0 5.1E-34 1.8E-38 265.2 28.4 259 1-271 35-318 (367)
8 3idv_A Protein disulfide-isome 100.0 3.9E-35 1.3E-39 257.0 19.5 206 86-295 14-235 (241)
9 3idv_A Protein disulfide-isome 100.0 1E-33 3.5E-38 247.9 17.9 190 1-192 37-239 (241)
10 2r2j_A Thioredoxin domain-cont 100.0 3.4E-31 1.2E-35 247.7 26.4 262 1-276 27-308 (382)
11 3us3_A Calsequestrin-1; calciu 100.0 6.5E-31 2.2E-35 244.3 19.5 218 85-311 11-241 (367)
12 1sji_A Calsequestrin 2, calseq 100.0 3.6E-30 1.2E-34 238.0 18.6 216 86-311 10-239 (350)
13 1a8l_A Protein disulfide oxido 100.0 6.9E-29 2.4E-33 215.2 16.8 182 1-188 27-224 (226)
14 1a8l_A Protein disulfide oxido 100.0 1.7E-28 6E-33 212.7 19.1 187 93-282 8-214 (226)
15 2ywm_A Glutaredoxin-like prote 100.0 1.9E-28 6.4E-33 213.0 16.4 178 4-189 33-219 (229)
16 2ywm_A Glutaredoxin-like prote 100.0 7.5E-28 2.6E-32 209.2 19.1 184 94-282 8-208 (229)
17 3f8u_A Protein disulfide-isome 100.0 2.4E-28 8.3E-33 235.2 16.8 215 88-312 2-232 (481)
18 2r2j_A Thioredoxin domain-cont 99.9 5.7E-28 2E-32 225.8 12.3 215 87-311 5-232 (382)
19 3uem_A Protein disulfide-isome 99.9 3.5E-27 1.2E-31 218.9 17.4 187 1-190 140-357 (361)
20 3ed3_A Protein disulfide-isome 99.9 1.8E-25 6.2E-30 201.5 22.9 214 85-307 15-279 (298)
21 2hls_A Protein disulfide oxido 99.9 5.9E-25 2E-29 192.5 15.9 182 1-191 30-227 (243)
22 2b5e_A Protein disulfide-isome 99.9 2.6E-25 9.1E-30 215.2 14.0 214 85-312 12-235 (504)
23 2hls_A Protein disulfide oxido 99.9 7.6E-24 2.6E-28 185.4 19.1 183 94-282 14-214 (243)
24 3ed3_A Protein disulfide-isome 99.9 8.4E-23 2.9E-27 184.1 17.8 195 1-207 40-286 (298)
25 3q6o_A Sulfhydryl oxidase 1; p 99.9 7.1E-21 2.4E-25 166.8 19.2 198 86-294 11-237 (244)
26 4f9z_D Endoplasmic reticulum r 99.8 8.6E-19 3E-23 151.8 21.1 196 86-293 8-221 (227)
27 3t58_A Sulfhydryl oxidase 1; o 99.8 6.3E-19 2.2E-23 169.6 18.6 185 86-278 11-223 (519)
28 4f9z_D Endoplasmic reticulum r 99.8 1.3E-18 4.5E-23 150.6 18.8 175 1-188 32-223 (227)
29 3q6o_A Sulfhydryl oxidase 1; p 99.8 3.9E-18 1.3E-22 149.3 18.0 179 1-188 35-238 (244)
30 3h79_A Thioredoxin-like protei 99.8 2.6E-18 8.9E-23 134.8 12.1 103 85-188 13-126 (127)
31 3zzx_A Thioredoxin; oxidoreduc 99.7 1.2E-17 4.2E-22 126.4 11.7 95 90-188 3-104 (105)
32 3zzx_A Thioredoxin; oxidoreduc 99.7 1.4E-17 4.8E-22 126.1 11.8 93 196-294 5-103 (105)
33 3uvt_A Thioredoxin domain-cont 99.7 5.8E-17 2E-21 123.5 11.9 101 86-188 4-110 (111)
34 3t58_A Sulfhydryl oxidase 1; o 99.7 1.5E-16 5.1E-21 153.1 16.8 179 1-187 35-237 (519)
35 2dj1_A Protein disulfide-isome 99.7 4.4E-17 1.5E-21 129.8 10.7 105 86-191 16-125 (140)
36 3gnj_A Thioredoxin domain prot 99.7 1.5E-16 5.1E-21 121.3 13.0 100 87-188 4-108 (111)
37 3tco_A Thioredoxin (TRXA-1); d 99.7 1.3E-16 4.6E-21 121.0 11.9 101 86-188 3-107 (109)
38 1x5e_A Thioredoxin domain cont 99.7 7.9E-17 2.7E-21 126.0 10.9 103 86-191 6-111 (126)
39 2c0g_A ERP29 homolog, windbeut 99.7 9.3E-17 3.2E-21 139.6 12.2 141 86-239 15-174 (248)
40 2voc_A Thioredoxin; electron t 99.7 9.2E-17 3.1E-21 123.0 10.3 102 88-192 2-107 (112)
41 3qfa_C Thioredoxin; protein-pr 99.7 2.2E-16 7.4E-21 121.8 12.3 99 86-188 11-115 (116)
42 1mek_A Protein disulfide isome 99.7 5.6E-17 1.9E-21 125.2 9.0 105 86-191 6-118 (120)
43 2av4_A Thioredoxin-like protei 99.7 8.4E-17 2.9E-21 128.1 10.1 80 194-274 23-108 (160)
44 3h79_A Thioredoxin-like protei 99.7 6.2E-17 2.1E-21 126.9 9.3 101 191-294 14-125 (127)
45 2qgv_A Hydrogenase-1 operon pr 99.7 2.4E-16 8.1E-21 123.9 11.0 101 88-189 18-124 (140)
46 1nsw_A Thioredoxin, TRX; therm 99.7 3.5E-16 1.2E-20 118.0 11.5 98 89-188 2-103 (105)
47 3die_A Thioredoxin, TRX; elect 99.7 3.8E-16 1.3E-20 117.9 11.4 98 88-188 4-105 (106)
48 2qsi_A Putative hydrogenase ex 99.7 1.8E-16 6.2E-21 124.1 9.8 88 193-281 16-110 (137)
49 2yzu_A Thioredoxin; redox prot 99.7 5.8E-16 2E-20 117.3 11.9 101 88-190 2-106 (109)
50 2e0q_A Thioredoxin; electron t 99.7 5.2E-16 1.8E-20 116.4 11.5 98 89-189 1-102 (104)
51 2qgv_A Hydrogenase-1 operon pr 99.7 1.5E-16 5.3E-21 125.0 8.7 88 193-281 18-112 (140)
52 3hz4_A Thioredoxin; NYSGXRC, P 99.7 4.1E-16 1.4E-20 124.4 11.3 101 87-189 6-111 (140)
53 2ppt_A Thioredoxin-2; thiredox 99.7 5.6E-16 1.9E-20 125.8 12.1 103 86-190 46-152 (155)
54 2i4a_A Thioredoxin; acidophIle 99.7 5.6E-16 1.9E-20 117.2 11.3 100 87-188 2-106 (107)
55 3gnj_A Thioredoxin domain prot 99.7 6.7E-16 2.3E-20 117.6 11.8 89 192-281 4-97 (111)
56 2qsi_A Putative hydrogenase ex 99.7 4.1E-16 1.4E-20 122.1 10.6 99 89-189 17-122 (137)
57 2trx_A Thioredoxin; electron t 99.7 5.1E-16 1.7E-20 117.7 10.8 100 87-188 2-106 (108)
58 3f3q_A Thioredoxin-1; His TAG, 99.7 7.9E-16 2.7E-20 117.2 11.9 98 87-188 7-108 (109)
59 2l5l_A Thioredoxin; structural 99.7 9.7E-16 3.3E-20 121.6 12.8 102 87-190 9-126 (136)
60 1x5d_A Protein disulfide-isome 99.7 3.9E-16 1.3E-20 123.0 10.3 103 86-189 6-116 (133)
61 1x5e_A Thioredoxin domain cont 99.7 5.7E-16 1.9E-20 121.1 11.1 107 191-302 6-115 (126)
62 3hxs_A Thioredoxin, TRXP; elec 99.7 9E-16 3.1E-20 122.3 12.4 102 86-189 21-138 (141)
63 1zma_A Bacterocin transport ac 99.7 8.3E-16 2.8E-20 118.8 11.8 97 88-186 13-117 (118)
64 3p2a_A Thioredoxin 2, putative 99.7 8.3E-16 2.8E-20 123.7 11.8 103 86-190 37-143 (148)
65 2av4_A Thioredoxin-like protei 99.7 4.3E-16 1.5E-20 124.0 9.8 99 89-188 23-137 (160)
66 3d6i_A Monothiol glutaredoxin- 99.7 1E-15 3.5E-20 117.0 11.6 99 89-189 2-108 (112)
67 1ep7_A Thioredoxin CH1, H-type 99.6 1.6E-15 5.6E-20 115.7 12.6 98 88-188 3-109 (112)
68 2dml_A Protein disulfide-isome 99.6 5.4E-16 1.8E-20 121.8 9.9 102 86-189 16-123 (130)
69 3ga4_A Dolichyl-diphosphooligo 99.6 1.1E-15 3.8E-20 125.6 11.9 104 87-191 18-154 (178)
70 3aps_A DNAJ homolog subfamily 99.6 1E-15 3.4E-20 118.9 11.1 101 87-189 3-112 (122)
71 1dby_A Chloroplast thioredoxin 99.6 2E-15 6.9E-20 114.2 12.4 99 88-188 2-105 (107)
72 1syr_A Thioredoxin; SGPP, stru 99.6 1.9E-15 6.4E-20 115.6 12.3 99 86-188 8-110 (112)
73 2wz9_A Glutaredoxin-3; protein 99.6 1.3E-15 4.5E-20 123.3 11.7 116 88-207 13-141 (153)
74 1thx_A Thioredoxin, thioredoxi 99.6 2.1E-15 7.2E-20 115.5 12.2 101 87-189 7-112 (115)
75 2pu9_C TRX-F, thioredoxin F-ty 99.6 1.9E-15 6.6E-20 115.3 11.8 99 86-188 4-109 (111)
76 1w4v_A Thioredoxin, mitochondr 99.6 2.3E-15 7.9E-20 116.5 12.3 102 85-188 11-117 (119)
77 4euy_A Uncharacterized protein 99.6 1.9E-16 6.7E-21 119.7 5.9 93 93-188 7-103 (105)
78 3tco_A Thioredoxin (TRXA-1); d 99.6 1.9E-15 6.5E-20 114.5 11.0 89 192-281 4-96 (109)
79 2oe3_A Thioredoxin-3; electron 99.6 2.2E-15 7.7E-20 115.7 11.5 99 85-187 10-113 (114)
80 2h8l_A Protein disulfide-isome 99.6 2.3E-14 8E-19 125.8 19.5 214 88-311 7-245 (252)
81 1r26_A Thioredoxin; redox-acti 99.6 2.5E-15 8.6E-20 117.4 11.8 98 87-188 19-121 (125)
82 1t00_A Thioredoxin, TRX; redox 99.6 2.4E-15 8.1E-20 114.8 11.4 100 87-188 5-109 (112)
83 2dj0_A Thioredoxin-related tra 99.6 1.8E-16 6.1E-21 126.0 5.2 102 86-188 6-119 (137)
84 2l6c_A Thioredoxin; oxidoreduc 99.6 2.5E-15 8.5E-20 114.6 11.2 100 88-191 4-107 (110)
85 3apq_A DNAJ homolog subfamily 99.6 2.4E-15 8.4E-20 128.4 12.4 105 85-191 95-203 (210)
86 2vlu_A Thioredoxin, thioredoxi 99.6 4.5E-15 1.5E-19 115.2 12.8 99 87-189 13-119 (122)
87 1gh2_A Thioredoxin-like protei 99.6 3.1E-15 1.1E-19 113.3 11.5 96 89-188 3-105 (107)
88 2dj1_A Protein disulfide-isome 99.6 1.4E-15 4.6E-20 121.1 9.9 100 192-294 17-121 (140)
89 2o8v_B Thioredoxin 1; disulfid 99.6 1.3E-15 4.4E-20 119.6 9.2 100 87-188 22-126 (128)
90 1xwb_A Thioredoxin; dimerizati 99.6 5E-15 1.7E-19 111.6 12.1 97 89-188 2-105 (106)
91 3m9j_A Thioredoxin; oxidoreduc 99.6 4.8E-15 1.6E-19 111.6 11.9 95 90-188 3-104 (105)
92 3hz4_A Thioredoxin; NYSGXRC, P 99.6 2.4E-15 8.4E-20 119.9 10.7 89 192-281 6-99 (140)
93 2xc2_A Thioredoxinn; oxidoredu 99.6 4.5E-15 1.6E-19 114.3 11.8 96 88-188 14-116 (117)
94 1nsw_A Thioredoxin, TRX; therm 99.6 3.7E-15 1.3E-19 112.3 11.0 87 194-281 2-92 (105)
95 1faa_A Thioredoxin F; electron 99.6 5E-15 1.7E-19 115.3 12.1 99 86-188 17-122 (124)
96 3uvt_A Thioredoxin domain-cont 99.6 4E-15 1.4E-19 113.2 11.2 98 192-293 5-108 (111)
97 2vim_A Thioredoxin, TRX; thior 99.6 6.1E-15 2.1E-19 110.8 12.0 95 90-188 2-103 (104)
98 2voc_A Thioredoxin; electron t 99.6 3.4E-15 1.2E-19 114.2 10.7 97 194-295 3-103 (112)
99 3emx_A Thioredoxin; structural 99.6 3.6E-15 1.2E-19 118.2 11.2 102 86-191 15-127 (135)
100 1fb6_A Thioredoxin M; electron 99.6 3.9E-15 1.3E-19 112.0 10.7 97 89-187 2-103 (105)
101 3dxb_A Thioredoxin N-terminall 99.6 3.9E-15 1.3E-19 128.2 11.8 105 84-190 9-118 (222)
102 2yzu_A Thioredoxin; redox prot 99.6 5.4E-15 1.8E-19 111.9 11.2 98 193-294 2-103 (109)
103 3die_A Thioredoxin, TRX; elect 99.6 4.5E-15 1.5E-19 111.9 10.7 96 193-293 4-103 (106)
104 2i1u_A Thioredoxin, TRX, MPT46 99.6 5.7E-15 1.9E-19 114.3 11.3 101 87-189 12-117 (121)
105 3qfa_C Thioredoxin; protein-pr 99.6 3.9E-15 1.3E-19 114.7 10.2 86 192-279 12-103 (116)
106 2djj_A PDI, protein disulfide- 99.6 1.3E-15 4.3E-20 118.1 7.5 102 86-190 6-117 (121)
107 2trx_A Thioredoxin; electron t 99.6 6.7E-15 2.3E-19 111.4 11.2 88 193-281 3-95 (108)
108 3evi_A Phosducin-like protein 99.6 3.6E-15 1.2E-19 115.0 9.7 99 87-187 3-111 (118)
109 2qc7_A ERP31, ERP28, endoplasm 99.6 6.3E-15 2.2E-19 127.6 12.1 98 87-189 5-118 (240)
110 2ppt_A Thioredoxin-2; thiredox 99.6 7.5E-15 2.6E-19 119.2 11.7 99 192-294 47-149 (155)
111 3ga4_A Dolichyl-diphosphooligo 99.6 5E-15 1.7E-19 121.7 10.7 81 191-272 17-114 (178)
112 2dj3_A Protein disulfide-isome 99.6 8.9E-16 3E-20 121.1 6.0 104 86-190 6-118 (133)
113 2j23_A Thioredoxin; immune pro 99.6 4.8E-15 1.7E-19 115.0 9.9 99 88-188 16-119 (121)
114 3hxs_A Thioredoxin, TRXP; elec 99.6 5.3E-15 1.8E-19 117.8 10.4 99 191-293 21-135 (141)
115 2l5l_A Thioredoxin; structural 99.6 6.4E-15 2.2E-19 116.8 10.8 100 192-295 9-124 (136)
116 2i4a_A Thioredoxin; acidophIle 99.6 1E-14 3.4E-19 110.2 11.4 97 193-293 3-104 (107)
117 1xfl_A Thioredoxin H1; AT3G510 99.6 1.4E-14 4.8E-19 113.0 12.4 99 86-188 15-122 (124)
118 3p2a_A Thioredoxin 2, putative 99.6 6.1E-15 2.1E-19 118.6 10.6 99 191-293 37-139 (148)
119 1v98_A Thioredoxin; oxidoreduc 99.6 7.2E-15 2.5E-19 117.0 10.5 101 87-189 33-137 (140)
120 3f3q_A Thioredoxin-1; His TAG, 99.6 1.1E-14 3.9E-19 110.7 11.1 85 193-279 8-96 (109)
121 4euy_A Uncharacterized protein 99.6 2.2E-15 7.5E-20 113.8 6.9 91 198-293 7-101 (105)
122 3gix_A Thioredoxin-like protei 99.6 1.2E-14 3.9E-19 117.2 11.6 95 92-188 9-119 (149)
123 3d6i_A Monothiol glutaredoxin- 99.6 1.1E-14 3.7E-19 111.2 10.9 87 194-280 2-96 (112)
124 1w4v_A Thioredoxin, mitochondr 99.6 1.4E-14 4.7E-19 112.1 11.5 90 191-281 12-106 (119)
125 3qou_A Protein YBBN; thioredox 99.6 4.5E-15 1.5E-19 132.8 9.9 102 86-189 6-113 (287)
126 1syr_A Thioredoxin; SGPP, stru 99.6 2.1E-14 7E-19 109.7 12.2 88 190-279 7-98 (112)
127 3gix_A Thioredoxin-like protei 99.6 1.3E-14 4.4E-19 116.9 11.4 78 196-274 8-90 (149)
128 2e0q_A Thioredoxin; electron t 99.6 1.4E-14 4.7E-19 108.6 10.8 86 194-281 1-90 (104)
129 3evi_A Phosducin-like protein 99.6 8.8E-15 3E-19 112.8 9.7 86 193-280 4-93 (118)
130 1t00_A Thioredoxin, TRX; redox 99.6 1.2E-14 4.2E-19 110.8 10.6 89 192-281 5-98 (112)
131 1oaz_A Thioredoxin 1; immune s 99.6 1.9E-15 6.6E-20 117.7 6.0 100 87-188 3-121 (123)
132 3ul3_B Thioredoxin, thioredoxi 99.6 2.9E-15 9.8E-20 117.5 7.0 97 89-187 27-127 (128)
133 2dj0_A Thioredoxin-related tra 99.6 5.1E-15 1.7E-19 117.5 8.5 91 191-281 6-108 (137)
134 1x5d_A Protein disulfide-isome 99.6 8.2E-15 2.8E-19 115.3 9.6 91 191-282 6-105 (133)
135 1thx_A Thioredoxin, thioredoxi 99.6 2.3E-14 8E-19 109.6 11.6 89 192-281 7-100 (115)
136 1gh2_A Thioredoxin-like protei 99.6 2.2E-14 7.5E-19 108.5 11.3 83 196-280 6-94 (107)
137 1mek_A Protein disulfide isome 99.6 3.8E-15 1.3E-19 114.8 7.1 102 191-295 6-115 (120)
138 2vm1_A Thioredoxin, thioredoxi 99.6 3.8E-14 1.3E-18 109.0 12.7 99 88-190 7-114 (118)
139 1ti3_A Thioredoxin H, PTTRXH1; 99.6 2.5E-14 8.7E-19 109.1 11.4 97 88-188 5-110 (113)
140 2o8v_B Thioredoxin 1; disulfid 99.6 1E-14 3.5E-19 114.4 9.4 88 193-281 23-115 (128)
141 3apq_A DNAJ homolog subfamily 99.6 1.2E-14 4E-19 124.1 10.4 108 191-302 96-207 (210)
142 1zma_A Bacterocin transport ac 99.6 1.1E-14 3.6E-19 112.4 9.2 88 193-281 13-108 (118)
143 2wz9_A Glutaredoxin-3; protein 99.6 3.3E-14 1.1E-18 115.1 12.4 85 193-279 13-104 (153)
144 1dby_A Chloroplast thioredoxin 99.6 1.7E-14 5.7E-19 109.1 10.0 87 194-281 3-94 (107)
145 1ep7_A Thioredoxin CH1, H-type 99.6 3.2E-14 1.1E-18 108.4 11.4 85 194-279 4-97 (112)
146 1fb6_A Thioredoxin M; electron 99.6 2E-14 6.8E-19 108.1 10.1 87 194-281 2-93 (105)
147 2f51_A Thioredoxin; electron t 99.6 4.5E-14 1.6E-18 109.0 12.1 100 88-191 4-114 (118)
148 1xwb_A Thioredoxin; dimerizati 99.6 4.7E-14 1.6E-18 106.2 11.9 84 194-278 2-92 (106)
149 2es7_A Q8ZP25_salty, putative 99.5 6E-15 2.1E-19 117.7 7.1 101 88-191 18-126 (142)
150 1qgv_A Spliceosomal protein U5 99.5 1.9E-14 6.7E-19 114.9 10.0 94 93-187 10-118 (142)
151 3aps_A DNAJ homolog subfamily 99.5 1.1E-14 3.7E-19 113.0 8.0 88 191-279 2-94 (122)
152 2l57_A Uncharacterized protein 99.5 1.1E-14 3.8E-19 113.7 8.1 102 88-191 5-118 (126)
153 1r26_A Thioredoxin; redox-acti 99.5 2.7E-14 9.1E-19 111.6 10.2 83 194-278 21-108 (125)
154 2dml_A Protein disulfide-isome 99.5 7.2E-15 2.5E-19 115.3 7.0 90 192-282 17-112 (130)
155 2i1u_A Thioredoxin, TRX, MPT46 99.5 4.1E-14 1.4E-18 109.3 11.0 99 191-293 11-114 (121)
156 2pu9_C TRX-F, thioredoxin F-ty 99.5 2.8E-14 9.7E-19 108.7 9.9 88 191-280 4-98 (111)
157 3qou_A Protein YBBN; thioredox 99.5 1.5E-14 5.1E-19 129.4 9.5 100 191-294 6-111 (287)
158 3ec3_A Protein disulfide-isome 99.5 1.2E-12 4E-17 114.7 21.2 211 88-311 7-243 (250)
159 3m9j_A Thioredoxin; oxidoreduc 99.5 6.9E-14 2.4E-18 105.2 11.6 82 196-279 5-92 (105)
160 2dbc_A PDCL2, unnamed protein 99.5 3.6E-14 1.2E-18 112.3 10.5 101 86-188 9-119 (135)
161 2oe3_A Thioredoxin-3; electron 99.5 5.1E-14 1.7E-18 108.1 10.7 82 197-280 18-103 (114)
162 3dxb_A Thioredoxin N-terminall 99.5 3E-14 1E-18 122.6 10.5 91 191-282 11-106 (222)
163 2vlu_A Thioredoxin, thioredoxi 99.5 8.2E-14 2.8E-18 107.9 12.0 88 191-280 12-107 (122)
164 3d22_A TRXH4, thioredoxin H-ty 99.5 8.2E-14 2.8E-18 110.6 12.0 98 88-189 25-131 (139)
165 2xc2_A Thioredoxinn; oxidoredu 99.5 6.7E-14 2.3E-18 107.7 11.1 82 194-278 15-103 (117)
166 2l6c_A Thioredoxin; oxidoreduc 99.5 3.6E-14 1.2E-18 108.1 9.2 95 194-294 5-103 (110)
167 2vim_A Thioredoxin, TRX; thior 99.5 1E-13 3.5E-18 104.0 10.8 81 196-278 3-90 (104)
168 1faa_A Thioredoxin F; electron 99.5 7.9E-14 2.7E-18 108.4 10.4 88 191-280 17-111 (124)
169 3ul3_B Thioredoxin, thioredoxi 99.5 2E-14 6.9E-19 112.6 7.0 91 199-293 32-126 (128)
170 2dj3_A Protein disulfide-isome 99.5 2.2E-14 7.7E-19 112.9 7.2 102 191-295 6-116 (133)
171 1oaz_A Thioredoxin 1; immune s 99.5 1.6E-14 5.5E-19 112.5 6.0 97 193-293 4-119 (123)
172 3cxg_A Putative thioredoxin; m 99.5 7.6E-14 2.6E-18 110.1 10.0 99 86-189 19-128 (133)
173 1v98_A Thioredoxin; oxidoreduc 99.5 9.9E-14 3.4E-18 110.4 10.4 89 192-281 33-125 (140)
174 1xfl_A Thioredoxin H1; AT3G510 99.5 2.4E-13 8.1E-18 105.9 12.3 85 193-279 17-110 (124)
175 1qgv_A Spliceosomal protein U5 99.5 1.2E-13 4E-18 110.4 10.6 77 198-275 10-91 (142)
176 2h8l_A Protein disulfide-isome 99.5 1.2E-12 4E-17 114.9 17.5 176 1-189 29-229 (252)
177 2j23_A Thioredoxin; immune pro 99.5 9E-14 3.1E-18 107.8 9.1 85 195-279 19-107 (121)
178 2trc_P Phosducin, MEKA, PP33; 99.5 6.9E-14 2.4E-18 119.7 8.4 101 86-188 98-211 (217)
179 3emx_A Thioredoxin; structural 99.5 2E-13 6.9E-18 107.9 10.4 98 191-294 15-123 (135)
180 1ti3_A Thioredoxin H, PTTRXH1; 99.5 3.4E-13 1.2E-17 102.7 11.4 83 194-278 6-97 (113)
181 2f51_A Thioredoxin; electron t 99.5 2.1E-13 7.2E-18 105.2 10.1 86 194-281 5-101 (118)
182 2djj_A PDI, protein disulfide- 99.5 3.4E-14 1.2E-18 109.9 5.5 98 192-294 7-114 (121)
183 2djk_A PDI, protein disulfide- 99.5 4.5E-13 1.5E-17 105.7 11.9 99 88-189 7-114 (133)
184 2vm1_A Thioredoxin, thioredoxi 99.5 4.7E-13 1.6E-17 102.8 11.3 85 193-279 7-100 (118)
185 2qc7_A ERP31, ERP28, endoplasm 99.5 2.3E-13 8E-18 117.8 10.4 97 192-295 5-117 (240)
186 2yj7_A LPBCA thioredoxin; oxid 99.2 5.5E-15 1.9E-19 111.2 0.0 97 89-187 3-104 (106)
187 2fwh_A Thiol:disulfide interch 99.5 4.3E-13 1.5E-17 105.9 10.8 96 91-189 16-127 (134)
188 3d22_A TRXH4, thioredoxin H-ty 99.5 5.4E-13 1.8E-17 105.8 11.3 85 193-279 26-118 (139)
189 2es7_A Q8ZP25_salty, putative 99.4 3.1E-14 1.1E-18 113.6 3.7 97 193-294 18-122 (142)
190 2dbc_A PDCL2, unnamed protein 99.4 3.2E-13 1.1E-17 106.8 9.3 87 192-280 10-100 (135)
191 3qcp_A QSOX from trypanosoma b 99.4 5.8E-14 2E-18 132.0 5.0 103 86-190 22-139 (470)
192 2c0g_A ERP29 homolog, windbeut 99.4 4.3E-13 1.5E-17 116.5 9.9 97 191-295 15-130 (248)
193 1a0r_P Phosducin, MEKA, PP33; 99.4 4.9E-13 1.7E-17 116.0 10.2 101 86-188 111-224 (245)
194 2kuc_A Putative disulphide-iso 99.4 3.3E-13 1.1E-17 105.7 8.3 101 89-191 8-122 (130)
195 2djk_A PDI, protein disulfide- 99.4 6.2E-13 2.1E-17 104.9 9.8 113 193-310 7-129 (133)
196 3ec3_A Protein disulfide-isome 99.4 1.3E-11 4.5E-16 108.0 19.2 176 1-190 30-228 (250)
197 2trc_P Phosducin, MEKA, PP33; 99.4 6E-13 2.1E-17 113.8 10.2 88 192-281 99-193 (217)
198 3kp8_A Vkorc1/thioredoxin doma 99.4 2.3E-13 8E-18 102.8 6.7 75 105-189 13-94 (106)
199 3kp8_A Vkorc1/thioredoxin doma 99.4 2.4E-13 8.2E-18 102.8 6.7 70 1-80 17-93 (106)
200 3iv4_A Putative oxidoreductase 99.4 7.4E-13 2.5E-17 99.5 8.9 77 195-274 9-94 (112)
201 1wou_A Thioredoxin -related pr 99.4 1.1E-12 3.6E-17 102.0 10.0 97 88-187 6-122 (123)
202 3cxg_A Putative thioredoxin; m 99.4 1E-12 3.6E-17 103.5 9.9 85 192-279 20-115 (133)
203 1ilo_A Conserved hypothetical 99.4 6.8E-13 2.3E-17 93.9 7.8 73 1-77 4-76 (77)
204 1wmj_A Thioredoxin H-type; str 99.4 7.9E-14 2.7E-18 109.2 3.1 100 87-190 14-122 (130)
205 3iv4_A Putative oxidoreductase 99.4 2E-12 6.9E-17 97.1 10.5 96 88-185 7-111 (112)
206 2l57_A Uncharacterized protein 99.4 2.7E-13 9.4E-18 105.7 6.0 87 204-294 21-114 (126)
207 1a0r_P Phosducin, MEKA, PP33; 99.4 1.4E-12 4.9E-17 113.1 10.0 87 192-280 112-205 (245)
208 3fk8_A Disulphide isomerase; A 99.4 2E-12 6.8E-17 101.7 9.7 89 98-188 23-131 (133)
209 2fwh_A Thiol:disulfide interch 99.4 1.3E-12 4.6E-17 103.0 8.2 97 193-294 13-125 (134)
210 2yj7_A LPBCA thioredoxin; oxid 99.1 6E-14 2.1E-18 105.4 0.0 87 194-281 3-94 (106)
211 1wou_A Thioredoxin -related pr 99.4 2.8E-12 9.6E-17 99.6 9.5 82 193-275 6-106 (123)
212 1nho_A Probable thioredoxin; b 99.4 1.4E-12 4.7E-17 94.0 6.8 75 1-80 6-83 (85)
213 1nho_A Probable thioredoxin; b 99.3 1.6E-12 5.4E-17 93.7 6.7 78 106-188 3-83 (85)
214 1fo5_A Thioredoxin; disulfide 99.3 1.4E-12 4.8E-17 93.9 6.1 79 105-188 3-84 (85)
215 3qcp_A QSOX from trypanosoma b 99.3 7.2E-13 2.5E-17 124.6 5.5 93 191-283 22-129 (470)
216 1ilo_A Conserved hypothetical 99.3 5E-12 1.7E-16 89.3 8.5 73 108-185 3-76 (77)
217 1fo5_A Thioredoxin; disulfide 99.3 3.4E-12 1.1E-16 91.9 7.0 68 210-281 3-73 (85)
218 1hyu_A AHPF, alkyl hydroperoxi 99.3 3.2E-11 1.1E-15 116.7 15.8 169 2-188 24-198 (521)
219 3fk8_A Disulphide isomerase; A 99.3 5.7E-12 1.9E-16 99.1 8.0 72 206-278 26-110 (133)
220 3dml_A Putative uncharacterize 99.3 4.9E-12 1.7E-16 96.2 6.1 85 103-188 17-108 (116)
221 1hyu_A AHPF, alkyl hydroperoxi 99.3 3.6E-10 1.2E-14 109.3 20.7 162 105-281 19-187 (521)
222 2kuc_A Putative disulphide-iso 99.3 4.5E-12 1.6E-16 99.1 5.7 95 196-294 10-118 (130)
223 3f9u_A Putative exported cytoc 99.3 1.2E-11 4.1E-16 101.8 8.0 97 91-188 30-164 (172)
224 1sen_A Thioredoxin-like protei 99.2 2.7E-11 9.2E-16 99.0 8.7 94 94-188 36-146 (164)
225 2lst_A Thioredoxin; structural 98.9 1.1E-12 3.6E-17 102.8 0.0 93 95-189 10-115 (130)
226 3dml_A Putative uncharacterize 99.2 8.5E-12 2.9E-16 94.9 4.7 78 1-79 23-107 (116)
227 1z6n_A Hypothetical protein PA 99.2 4.6E-11 1.6E-15 97.7 9.4 84 196-281 40-131 (167)
228 1wmj_A Thioredoxin H-type; str 99.2 1.2E-12 4.2E-17 102.3 -0.3 84 193-278 15-107 (130)
229 2lst_A Thioredoxin; structural 98.8 2.2E-12 7.4E-17 101.0 0.0 80 201-281 11-103 (130)
230 3ph9_A Anterior gradient prote 99.2 8.7E-11 3E-15 94.3 8.9 81 94-174 34-120 (151)
231 3kp9_A Vkorc1/thioredoxin doma 99.2 1.1E-11 3.8E-16 109.7 3.9 71 1-81 202-279 (291)
232 2ju5_A Thioredoxin disulfide i 99.2 1.3E-10 4.4E-15 93.9 9.5 89 97-188 40-150 (154)
233 1z6n_A Hypothetical protein PA 99.1 6.2E-11 2.1E-15 96.9 7.4 92 91-186 40-139 (167)
234 1lu4_A Soluble secreted antige 99.1 2.5E-10 8.6E-15 89.4 10.4 83 103-188 23-134 (136)
235 2h30_A Thioredoxin, peptide me 99.1 1E-10 3.4E-15 95.1 8.2 101 89-190 23-156 (164)
236 3erw_A Sporulation thiol-disul 99.1 1.7E-10 5.9E-15 91.3 9.2 82 103-185 33-144 (145)
237 2b5x_A YKUV protein, TRXY; thi 99.1 2.5E-10 8.6E-15 90.7 9.8 86 102-189 27-144 (148)
238 3kp9_A Vkorc1/thioredoxin doma 99.1 1.1E-10 3.6E-15 103.4 8.2 88 94-193 189-283 (291)
239 3raz_A Thioredoxin-related pro 99.1 2.7E-10 9.2E-15 91.4 9.5 87 103-190 23-140 (151)
240 1zzo_A RV1677; thioredoxin fol 99.1 4.1E-10 1.4E-14 88.1 10.2 83 103-188 24-133 (136)
241 3ph9_A Anterior gradient prote 99.1 4.2E-11 1.4E-15 96.1 4.3 79 201-279 36-120 (151)
242 2fgx_A Putative thioredoxin; N 99.1 2.7E-10 9.3E-15 85.4 8.2 73 1-77 33-106 (107)
243 3ira_A Conserved protein; meth 99.1 1.4E-10 4.7E-15 95.1 6.9 79 196-275 26-119 (173)
244 2ju5_A Thioredoxin disulfide i 99.1 2.9E-10 9.8E-15 91.8 8.3 74 206-280 44-136 (154)
245 2l5o_A Putative thioredoxin; s 99.1 6.5E-10 2.2E-14 89.1 10.3 85 103-188 27-139 (153)
246 2fgx_A Putative thioredoxin; N 99.1 4.4E-10 1.5E-14 84.3 8.5 76 106-185 30-106 (107)
247 2f9s_A Thiol-disulfide oxidore 99.0 6.6E-10 2.3E-14 89.0 9.3 87 103-190 25-138 (151)
248 3f9u_A Putative exported cytoc 99.0 1.4E-10 4.8E-15 95.3 5.3 84 197-281 31-152 (172)
249 3erw_A Sporulation thiol-disul 99.0 9.1E-10 3.1E-14 87.1 9.8 74 208-281 33-136 (145)
250 4evm_A Thioredoxin family prot 99.0 1.3E-09 4.5E-14 85.1 10.2 83 103-187 21-136 (138)
251 1lu4_A Soluble secreted antige 99.0 8.7E-10 3E-14 86.3 8.8 72 208-281 23-123 (136)
252 1sen_A Thioredoxin-like protei 99.0 1.4E-10 4.7E-15 94.7 4.1 80 200-279 37-123 (164)
253 3or5_A Thiol:disulfide interch 99.0 1.5E-09 5.1E-14 88.0 10.3 86 103-189 33-150 (165)
254 1ttz_A Conserved hypothetical 99.0 9.6E-10 3.3E-14 79.5 8.0 73 108-189 3-76 (87)
255 1nm3_A Protein HI0572; hybrid, 99.0 3.7E-09 1.3E-13 91.8 13.1 146 103-273 32-229 (241)
256 3ira_A Conserved protein; meth 99.0 6.1E-10 2.1E-14 91.2 7.4 78 91-169 26-118 (173)
257 3eyt_A Uncharacterized protein 99.0 1.3E-09 4.5E-14 87.8 9.4 86 103-189 27-151 (158)
258 3ia1_A THIO-disulfide isomeras 99.0 1.3E-09 4.3E-14 87.5 9.1 85 105-191 31-145 (154)
259 2h30_A Thioredoxin, peptide me 99.0 6.1E-10 2.1E-14 90.4 6.9 99 193-294 22-153 (164)
260 3lor_A Thiol-disulfide isomera 99.0 2.4E-09 8.1E-14 86.4 10.0 86 103-189 29-154 (160)
261 1zzo_A RV1677; thioredoxin fol 99.0 8.2E-10 2.8E-14 86.3 7.0 72 208-281 24-122 (136)
262 3raz_A Thioredoxin-related pro 99.0 1.6E-09 5.3E-14 86.8 8.7 75 208-282 23-128 (151)
263 2b5x_A YKUV protein, TRXY; thi 99.0 1.8E-09 6E-14 85.7 8.6 84 197-281 17-132 (148)
264 2lja_A Putative thiol-disulfid 99.0 1.4E-09 4.7E-14 87.1 7.9 86 103-189 29-142 (152)
265 3gl3_A Putative thiol:disulfid 99.0 2.8E-09 9.7E-14 85.2 9.6 88 103-190 27-142 (152)
266 1nm3_A Protein HI0572; hybrid, 99.0 1.2E-08 4.3E-13 88.4 14.4 139 1-167 38-228 (241)
267 3hdc_A Thioredoxin family prot 98.9 4.5E-09 1.5E-13 84.8 10.5 81 208-288 40-144 (158)
268 2f9s_A Thiol-disulfide oxidore 98.9 3.3E-09 1.1E-13 84.8 9.4 74 208-281 25-125 (151)
269 3hcz_A Possible thiol-disulfid 98.9 1.2E-09 4.2E-14 86.7 6.3 84 103-187 30-143 (148)
270 3fkf_A Thiol-disulfide oxidore 98.9 4.1E-09 1.4E-13 83.7 9.0 83 103-188 32-144 (148)
271 3hdc_A Thioredoxin family prot 98.9 5.9E-09 2E-13 84.1 9.8 89 103-191 40-153 (158)
272 1ttz_A Conserved hypothetical 98.9 2E-09 6.7E-14 77.8 6.1 71 213-294 3-74 (87)
273 2b1k_A Thiol:disulfide interch 98.9 4.2E-09 1.5E-13 85.8 8.9 83 103-188 50-158 (168)
274 3ha9_A Uncharacterized thiored 98.9 5.1E-09 1.8E-13 85.0 9.0 82 103-188 36-162 (165)
275 3s9f_A Tryparedoxin; thioredox 98.9 6.1E-09 2.1E-13 84.9 9.5 69 208-276 47-145 (165)
276 1i5g_A Tryparedoxin II; electr 98.9 6.7E-09 2.3E-13 82.4 9.5 70 208-277 27-126 (144)
277 3gl3_A Putative thiol:disulfid 98.9 7E-09 2.4E-13 82.9 9.5 86 208-294 27-139 (152)
278 2l4c_A Endoplasmic reticulum r 98.9 2E-08 6.8E-13 77.6 11.6 103 78-189 14-123 (124)
279 3kcm_A Thioredoxin family prot 98.9 7.5E-09 2.5E-13 82.9 9.6 88 103-190 27-143 (154)
280 3fkf_A Thiol-disulfide oxidore 98.9 3.1E-09 1.1E-13 84.3 7.2 67 208-274 32-128 (148)
281 2lrn_A Thiol:disulfide interch 98.9 9.5E-09 3.3E-13 82.3 9.9 66 103-168 28-122 (152)
282 3or5_A Thiol:disulfide interch 98.9 6.8E-09 2.3E-13 84.1 9.1 74 208-281 33-138 (165)
283 1o8x_A Tryparedoxin, TRYX, TXN 98.9 8.5E-09 2.9E-13 82.0 9.5 69 208-276 27-125 (146)
284 3eur_A Uncharacterized protein 98.9 3.8E-09 1.3E-13 83.6 7.4 81 104-186 31-141 (142)
285 4evm_A Thioredoxin family prot 98.9 8.7E-09 3E-13 80.3 9.3 73 208-281 21-126 (138)
286 1kng_A Thiol:disulfide interch 98.9 7.9E-09 2.7E-13 82.9 9.3 82 103-188 41-150 (156)
287 3eyt_A Uncharacterized protein 98.9 8.2E-09 2.8E-13 83.1 9.2 73 209-281 28-139 (158)
288 2l5o_A Putative thioredoxin; s 98.9 6.5E-09 2.2E-13 83.1 8.5 74 208-281 27-128 (153)
289 1o73_A Tryparedoxin; electron 98.9 6.1E-09 2.1E-13 82.5 8.2 71 208-278 27-127 (144)
290 1o8x_A Tryparedoxin, TRYX, TXN 98.9 5.6E-09 1.9E-13 83.1 7.9 67 103-169 27-123 (146)
291 2lrn_A Thiol:disulfide interch 98.9 1.2E-08 4E-13 81.7 9.9 68 208-275 28-124 (152)
292 2lrt_A Uncharacterized protein 98.9 1.1E-08 3.7E-13 82.1 9.5 76 103-178 34-137 (152)
293 3ewl_A Uncharacterized conserv 98.9 6.8E-09 2.3E-13 82.0 8.2 83 103-188 26-139 (142)
294 1o73_A Tryparedoxin; electron 98.8 6.4E-09 2.2E-13 82.3 7.9 68 103-170 27-124 (144)
295 1i5g_A Tryparedoxin II; electr 98.8 6.4E-09 2.2E-13 82.5 7.8 67 103-169 27-123 (144)
296 2e7p_A Glutaredoxin; thioredox 98.8 5.8E-09 2E-13 79.6 7.2 84 95-188 11-106 (116)
297 3lor_A Thiol-disulfide isomera 98.8 1.3E-08 4.5E-13 82.0 9.5 74 208-281 29-142 (160)
298 2lja_A Putative thiol-disulfid 98.8 7E-09 2.4E-13 82.9 7.8 74 208-281 29-130 (152)
299 3s9f_A Tryparedoxin; thioredox 98.8 9.3E-09 3.2E-13 83.8 8.6 66 103-168 47-142 (165)
300 2l4c_A Endoplasmic reticulum r 98.8 1.7E-08 6E-13 77.9 9.1 100 187-295 15-122 (124)
301 3ewl_A Uncharacterized conserv 98.8 9.7E-09 3.3E-13 81.1 7.7 67 208-274 26-123 (142)
302 3kcm_A Thioredoxin family prot 98.8 2.4E-08 8.1E-13 79.9 10.0 86 208-294 27-140 (154)
303 3ia1_A THIO-disulfide isomeras 98.8 1.2E-08 4.2E-13 81.7 8.0 81 210-294 31-141 (154)
304 2k8s_A Thioredoxin; dimer, str 98.8 6.3E-09 2.2E-13 73.9 5.4 65 108-176 4-72 (80)
305 3ha9_A Uncharacterized thiored 98.8 1.8E-08 6.2E-13 81.7 8.7 70 208-280 36-149 (165)
306 3lwa_A Secreted thiol-disulfid 98.8 2.2E-08 7.4E-13 82.8 9.3 85 103-188 58-179 (183)
307 2hyx_A Protein DIPZ; thioredox 98.8 1.6E-08 5.5E-13 92.4 9.0 85 103-188 81-197 (352)
308 3eur_A Uncharacterized protein 98.8 1.8E-08 6E-13 79.7 8.2 65 209-273 31-126 (142)
309 2lrt_A Uncharacterized protein 98.8 2.9E-08 9.8E-13 79.6 9.2 74 208-281 34-135 (152)
310 3hcz_A Possible thiol-disulfid 98.8 9.9E-09 3.4E-13 81.4 6.4 72 208-279 30-131 (148)
311 3kh7_A Thiol:disulfide interch 98.8 3.5E-08 1.2E-12 81.2 9.8 83 103-188 57-165 (176)
312 2k8s_A Thioredoxin; dimer, str 98.7 1.5E-08 5.2E-13 71.9 6.1 64 213-280 4-71 (80)
313 4fo5_A Thioredoxin-like protei 98.7 5.4E-08 1.9E-12 76.9 9.2 81 103-186 31-141 (143)
314 4fo5_A Thioredoxin-like protei 98.7 5.9E-08 2E-12 76.7 8.8 67 208-274 31-127 (143)
315 3fw2_A Thiol-disulfide oxidore 98.7 1.1E-07 3.8E-12 75.8 10.1 82 103-187 32-145 (150)
316 3fw2_A Thiol-disulfide oxidore 98.7 7.4E-08 2.5E-12 76.8 9.0 67 208-274 32-130 (150)
317 1kng_A Thiol:disulfide interch 98.7 5.6E-08 1.9E-12 77.8 8.4 70 209-281 42-139 (156)
318 1jfu_A Thiol:disulfide interch 98.7 1E-07 3.4E-12 79.0 10.1 87 103-189 59-179 (186)
319 2lus_A Thioredoxion; CR-Trp16, 98.1 2.4E-09 8.2E-14 84.6 0.0 71 210-280 27-128 (143)
320 2ywi_A Hypothetical conserved 98.7 8.4E-08 2.9E-12 80.1 9.4 86 103-189 44-173 (196)
321 2lus_A Thioredoxion; CR-Trp16, 98.1 2.5E-09 8.7E-14 84.5 0.0 71 104-174 25-127 (143)
322 2b1k_A Thiol:disulfide interch 98.6 7.3E-08 2.5E-12 78.4 8.3 73 207-281 49-147 (168)
323 2e7p_A Glutaredoxin; thioredox 98.6 7.4E-08 2.5E-12 73.3 7.7 65 201-274 12-84 (116)
324 3lwa_A Secreted thiol-disulfid 98.6 7.3E-08 2.5E-12 79.6 8.0 74 208-281 58-168 (183)
325 2hyx_A Protein DIPZ; thioredox 98.6 9.7E-08 3.3E-12 87.2 9.2 73 209-281 82-186 (352)
326 2dlx_A UBX domain-containing p 98.6 1.9E-07 6.4E-12 74.9 9.7 88 98-188 36-134 (153)
327 2cvb_A Probable thiol-disulfid 98.6 7.6E-08 2.6E-12 79.9 7.7 84 103-188 32-157 (188)
328 2ywi_A Hypothetical conserved 98.6 7.9E-08 2.7E-12 80.3 7.8 78 1-79 51-171 (196)
329 1wjk_A C330018D20RIK protein; 98.6 1.5E-07 5.1E-12 69.8 7.5 78 104-189 15-95 (100)
330 3u5r_E Uncharacterized protein 98.6 1.3E-07 4.4E-12 80.7 8.1 70 104-174 58-161 (218)
331 2dlx_A UBX domain-containing p 98.5 1.4E-07 4.6E-12 75.7 7.1 68 205-273 38-115 (153)
332 1jfu_A Thiol:disulfide interch 98.5 4.4E-07 1.5E-11 75.0 10.2 74 208-281 59-165 (186)
333 1ego_A Glutaredoxin; electron 98.5 1.1E-07 3.7E-12 68.0 5.7 71 108-188 3-82 (85)
334 2cvb_A Probable thiol-disulfid 98.5 3.5E-07 1.2E-11 75.8 8.9 69 209-279 33-134 (188)
335 3u5r_E Uncharacterized protein 98.5 2.3E-07 7.7E-12 79.1 7.7 70 210-280 60-162 (218)
336 3kh7_A Thiol:disulfide interch 98.5 3.2E-07 1.1E-11 75.4 8.2 69 209-281 58-154 (176)
337 1un2_A DSBA, thiol-disulfide i 98.5 6.2E-08 2.1E-12 81.3 3.7 100 146-248 40-154 (197)
338 1un2_A DSBA, thiol-disulfide i 98.5 7.4E-08 2.5E-12 80.8 4.1 103 37-144 39-155 (197)
339 3drn_A Peroxiredoxin, bacterio 98.5 6.9E-07 2.4E-11 72.1 9.5 85 103-187 27-146 (161)
340 1ego_A Glutaredoxin; electron 98.4 4.2E-07 1.4E-11 64.9 6.8 58 213-274 3-69 (85)
341 2rli_A SCO2 protein homolog, m 98.4 4.7E-07 1.6E-11 73.6 7.9 85 103-188 25-162 (171)
342 2k6v_A Putative cytochrome C o 98.4 3.5E-07 1.2E-11 74.4 6.9 84 103-187 34-170 (172)
343 2ls5_A Uncharacterized protein 97.8 2.6E-08 8.8E-13 80.3 0.0 68 208-275 32-129 (159)
344 1xvw_A Hypothetical protein RV 98.4 5.5E-07 1.9E-11 72.5 7.7 82 105-186 37-156 (160)
345 1eej_A Thiol:disulfide interch 98.4 3.7E-07 1.3E-11 77.7 6.7 79 104-188 86-209 (216)
346 2ggt_A SCO1 protein homolog, m 98.4 5.3E-07 1.8E-11 72.7 7.3 85 103-188 22-159 (164)
347 2ls5_A Uncharacterized protein 97.8 3.5E-08 1.2E-12 79.5 0.0 83 103-187 32-145 (159)
348 1wjk_A C330018D20RIK protein; 98.4 3.9E-07 1.3E-11 67.6 5.7 73 209-293 15-92 (100)
349 1t3b_A Thiol:disulfide interch 98.4 5.5E-07 1.9E-11 76.3 6.6 79 104-188 86-209 (211)
350 3gyk_A 27KDA outer membrane pr 98.4 1.1E-06 3.7E-11 72.0 8.0 80 104-188 22-171 (175)
351 1xvw_A Hypothetical protein RV 98.3 2E-06 6.8E-11 69.1 8.9 72 209-280 36-142 (160)
352 1we0_A Alkyl hydroperoxide red 98.3 5.9E-07 2E-11 74.4 5.7 86 103-188 30-155 (187)
353 3drn_A Peroxiredoxin, bacterio 98.3 1.7E-06 5.7E-11 69.8 8.2 70 210-279 30-130 (161)
354 2p5q_A Glutathione peroxidase 98.3 1.6E-06 5.5E-11 70.2 8.1 41 103-143 31-71 (170)
355 3cmi_A Peroxiredoxin HYR1; thi 98.3 1E-06 3.6E-11 71.8 6.9 84 103-188 31-166 (171)
356 2vup_A Glutathione peroxidase- 98.3 1.8E-06 6.1E-11 71.8 8.3 41 103-143 47-87 (190)
357 2bmx_A Alkyl hydroperoxidase C 98.3 1.2E-06 4.1E-11 73.1 7.2 87 103-189 44-169 (195)
358 2v1m_A Glutathione peroxidase; 98.3 3.6E-06 1.2E-10 68.1 9.0 41 103-143 30-70 (169)
359 2k6v_A Putative cytochrome C o 98.2 1.8E-06 6.1E-11 70.1 7.0 73 208-280 34-157 (172)
360 1zof_A Alkyl hydroperoxide-red 98.2 7E-07 2.4E-11 74.7 4.6 86 103-188 32-159 (198)
361 2rli_A SCO2 protein homolog, m 98.2 2.8E-06 9.6E-11 68.9 7.8 73 209-281 26-151 (171)
362 1kte_A Thioltransferase; redox 98.2 2.5E-06 8.5E-11 63.5 6.8 67 95-167 3-77 (105)
363 2ggt_A SCO1 protein homolog, m 98.2 3E-06 1E-10 68.1 7.8 73 209-281 23-148 (164)
364 3cmi_A Peroxiredoxin HYR1; thi 98.2 4E-06 1.4E-10 68.2 8.1 40 208-248 31-70 (171)
365 1kte_A Thioltransferase; redox 98.2 3.5E-06 1.2E-10 62.7 7.0 69 200-274 3-79 (105)
366 2p31_A CL683, glutathione pero 98.2 2.1E-06 7.3E-11 70.7 6.3 41 103-143 48-88 (181)
367 2obi_A PHGPX, GPX-4, phospholi 98.2 5.4E-06 1.8E-10 68.3 8.3 41 103-143 46-86 (183)
368 1eej_A Thiol:disulfide interch 98.2 1E-06 3.4E-11 75.0 3.9 71 1-79 91-208 (216)
369 1we0_A Alkyl hydroperoxide red 98.2 3.2E-06 1.1E-10 69.9 6.9 71 209-279 31-138 (187)
370 1qmv_A Human thioredoxin perox 98.2 4.1E-06 1.4E-10 70.0 7.4 86 103-188 33-161 (197)
371 3dwv_A Glutathione peroxidase- 98.1 4.7E-06 1.6E-10 69.0 7.5 41 103-143 45-85 (187)
372 1t3b_A Thiol:disulfide interch 98.1 1.3E-06 4.5E-11 73.9 4.0 72 1-80 91-209 (211)
373 2p5q_A Glutathione peroxidase 98.1 8.3E-06 2.8E-10 65.9 8.5 41 208-248 31-71 (170)
374 1v58_A Thiol:disulfide interch 98.1 7.7E-06 2.6E-10 70.7 8.0 81 105-189 98-232 (241)
375 3kij_A Probable glutathione pe 98.1 8.7E-06 3E-10 66.9 8.0 41 103-143 37-77 (180)
376 2v1m_A Glutathione peroxidase; 98.1 1.4E-05 4.9E-10 64.5 8.9 41 208-248 30-70 (169)
377 1uul_A Tryparedoxin peroxidase 98.1 7.4E-06 2.5E-10 68.7 7.3 86 103-188 35-163 (202)
378 2vup_A Glutathione peroxidase- 98.1 7.9E-06 2.7E-10 67.8 7.4 41 208-248 47-87 (190)
379 2gs3_A PHGPX, GPX-4, phospholi 98.1 8.6E-06 2.9E-10 67.2 7.3 41 103-143 48-88 (185)
380 2bmx_A Alkyl hydroperoxidase C 98.0 8.1E-06 2.8E-10 68.0 7.2 72 209-280 45-152 (195)
381 3gyk_A 27KDA outer membrane pr 98.0 7.3E-06 2.5E-10 66.9 6.7 31 209-239 22-52 (175)
382 1r7h_A NRDH-redoxin; thioredox 98.0 2.4E-05 8.1E-10 54.0 8.3 67 108-185 3-73 (75)
383 2a4v_A Peroxiredoxin DOT5; yea 98.0 2.5E-05 8.5E-10 62.6 9.6 77 98-175 29-137 (159)
384 2h01_A 2-Cys peroxiredoxin; th 98.0 6E-06 2.1E-10 68.6 6.0 85 103-187 30-156 (192)
385 1zye_A Thioredoxin-dependent p 98.0 7.5E-06 2.6E-10 69.7 6.6 84 104-187 56-182 (220)
386 1zof_A Alkyl hydroperoxide-red 98.0 7.1E-06 2.4E-10 68.5 6.2 72 209-280 33-143 (198)
387 2f8a_A Glutathione peroxidase 98.0 1.2E-05 4.1E-10 67.8 7.6 41 103-143 46-86 (208)
388 2p31_A CL683, glutathione pero 98.0 1.1E-05 3.7E-10 66.4 7.0 41 208-248 48-88 (181)
389 2gs3_A PHGPX, GPX-4, phospholi 98.0 3.1E-05 1.1E-09 63.8 9.8 41 208-248 48-88 (185)
390 2obi_A PHGPX, GPX-4, phospholi 98.0 2.2E-05 7.5E-10 64.6 8.8 41 208-248 46-86 (183)
391 2f8a_A Glutathione peroxidase 98.0 3.3E-05 1.1E-09 65.1 9.3 41 208-248 46-86 (208)
392 1qmv_A Human thioredoxin perox 98.0 2E-05 6.7E-10 65.8 7.7 72 209-280 34-145 (197)
393 2h01_A 2-Cys peroxiredoxin; th 97.9 1.3E-05 4.3E-10 66.6 6.5 71 209-279 31-140 (192)
394 2i81_A 2-Cys peroxiredoxin; st 97.9 1.5E-05 5.1E-10 67.5 7.0 85 103-187 51-177 (213)
395 2a4v_A Peroxiredoxin DOT5; yea 97.9 3.7E-05 1.3E-09 61.6 8.8 75 203-279 29-136 (159)
396 3gkn_A Bacterioferritin comigr 97.9 3.4E-05 1.2E-09 62.0 8.6 85 103-187 34-159 (163)
397 2cq9_A GLRX2 protein, glutared 97.9 3E-05 1E-09 60.1 7.7 67 92-167 15-89 (130)
398 2b7k_A SCO1 protein; metalloch 97.9 2.4E-05 8.3E-10 65.4 7.7 32 103-134 40-72 (200)
399 1uul_A Tryparedoxin peroxidase 97.9 2.4E-05 8.3E-10 65.5 7.2 66 209-274 36-140 (202)
400 3ztl_A Thioredoxin peroxidase; 97.9 2.5E-05 8.5E-10 66.5 7.3 85 103-187 68-195 (222)
401 1h75_A Glutaredoxin-like prote 97.9 3.4E-05 1.2E-09 54.1 6.6 69 108-187 3-75 (81)
402 2ht9_A Glutaredoxin-2; thiored 97.9 4.1E-05 1.4E-09 60.7 7.7 66 93-167 38-111 (146)
403 1v58_A Thiol:disulfide interch 97.8 3E-05 1E-09 67.0 7.2 70 209-281 97-220 (241)
404 1zye_A Thioredoxin-dependent p 97.8 3.5E-05 1.2E-09 65.5 7.4 71 209-279 56-166 (220)
405 3ztl_A Thioredoxin peroxidase; 97.8 5.3E-05 1.8E-09 64.5 8.5 73 208-280 68-180 (222)
406 2klx_A Glutaredoxin; thioredox 97.8 1.9E-05 6.5E-10 56.7 4.7 67 1-80 9-79 (89)
407 3bj5_A Protein disulfide-isome 97.8 0.00018 6.3E-09 56.9 10.8 108 77-190 8-127 (147)
408 2i81_A 2-Cys peroxiredoxin; st 97.8 4.8E-05 1.6E-09 64.3 7.4 65 209-273 52-154 (213)
409 3c1r_A Glutaredoxin-1; oxidize 97.8 4.7E-05 1.6E-09 58.0 6.6 68 94-167 15-91 (118)
410 3h93_A Thiol:disulfide interch 97.8 8.3E-05 2.8E-09 61.6 8.6 38 103-141 24-61 (192)
411 2jsy_A Probable thiol peroxida 97.8 8.5E-05 2.9E-09 59.9 8.5 85 103-187 43-164 (167)
412 2cq9_A GLRX2 protein, glutared 97.8 5.1E-05 1.7E-09 58.8 6.8 68 198-274 16-91 (130)
413 3rhb_A ATGRXC5, glutaredoxin-C 97.8 7.5E-05 2.6E-09 56.2 7.6 65 94-167 9-82 (113)
414 2ht9_A Glutaredoxin-2; thiored 97.8 6.3E-05 2.2E-09 59.6 7.4 68 198-274 38-113 (146)
415 3gkn_A Bacterioferritin comigr 97.8 5.3E-05 1.8E-09 60.8 7.0 65 209-273 35-137 (163)
416 1h75_A Glutaredoxin-like prote 97.8 9.1E-05 3.1E-09 51.9 7.4 54 213-273 3-60 (81)
417 2hze_A Glutaredoxin-1; thiored 97.7 3.2E-05 1.1E-09 58.4 5.1 67 95-167 10-84 (114)
418 2hze_A Glutaredoxin-1; thiored 97.7 2.9E-05 1E-09 58.7 4.8 59 212-274 20-86 (114)
419 3hd5_A Thiol:disulfide interch 97.7 0.00014 4.7E-09 60.4 9.5 33 103-135 24-56 (195)
420 3dwv_A Glutathione peroxidase- 97.7 5.4E-05 1.8E-09 62.5 6.8 35 1-35 51-85 (187)
421 1r7h_A NRDH-redoxin; thioredox 97.7 0.00013 4.4E-09 50.1 7.5 54 213-273 3-60 (75)
422 3ic4_A Glutaredoxin (GRX-1); s 97.7 0.00012 4E-09 52.8 7.5 68 108-186 14-91 (92)
423 3c1r_A Glutaredoxin-1; oxidize 97.7 8.8E-05 3E-09 56.4 6.7 69 200-274 16-93 (118)
424 1xzo_A BSSCO, hypothetical pro 97.7 7.4E-05 2.5E-09 60.5 6.7 40 103-142 32-74 (174)
425 3kij_A Probable glutathione pe 97.7 5.9E-05 2E-09 61.8 6.1 41 208-248 37-77 (180)
426 1xvq_A Thiol peroxidase; thior 97.7 5.9E-05 2E-09 61.6 5.9 64 103-167 43-140 (175)
427 2yan_A Glutaredoxin-3; oxidore 97.6 0.00014 4.8E-09 54.0 7.3 65 94-167 7-81 (105)
428 3gv1_A Disulfide interchange p 97.6 0.0001 3.5E-09 58.4 6.4 81 103-191 13-140 (147)
429 2yan_A Glutaredoxin-3; oxidore 97.6 0.00018 6E-09 53.4 7.2 66 200-274 8-83 (105)
430 2wfc_A Peroxiredoxin 5, PRDX5; 97.6 0.0002 6.9E-09 58.0 8.1 39 210-248 32-73 (167)
431 3ixr_A Bacterioferritin comigr 97.6 0.00027 9.2E-09 57.8 8.7 64 104-167 51-152 (179)
432 2klx_A Glutaredoxin; thioredox 97.6 2.9E-05 9.9E-10 55.8 2.4 54 107-167 7-64 (89)
433 4g2e_A Peroxiredoxin; redox pr 97.6 7.7E-05 2.6E-09 59.7 5.1 40 103-142 29-69 (157)
434 3h93_A Thiol:disulfide interch 97.5 0.00023 7.9E-09 58.8 7.9 40 208-248 24-63 (192)
435 3rhb_A ATGRXC5, glutaredoxin-C 97.5 0.0002 6.8E-09 53.8 6.8 66 200-274 10-84 (113)
436 1n8j_A AHPC, alkyl hydroperoxi 97.5 0.00023 8E-09 58.6 7.6 85 103-187 29-153 (186)
437 3ic4_A Glutaredoxin (GRX-1); s 97.5 3.7E-05 1.3E-09 55.5 2.3 66 2-78 16-91 (92)
438 4gqc_A Thiol peroxidase, perox 97.5 3E-05 1E-09 62.7 2.0 47 96-142 25-72 (164)
439 1fov_A Glutaredoxin 3, GRX3; a 97.5 0.00031 1.1E-08 49.1 7.1 68 108-188 3-75 (82)
440 2pwj_A Mitochondrial peroxired 97.5 8.2E-05 2.8E-09 60.6 4.1 62 202-263 37-107 (171)
441 1fov_A Glutaredoxin 3, GRX3; a 97.5 5.6E-05 1.9E-09 53.1 2.7 68 1-81 4-76 (82)
442 1xvq_A Thiol peroxidase; thior 97.5 0.00027 9.3E-09 57.5 7.2 63 209-274 44-142 (175)
443 2jsy_A Probable thiol peroxida 97.4 0.00017 5.8E-09 58.1 5.8 38 209-248 44-82 (167)
444 3qmx_A Glutaredoxin A, glutare 97.4 0.00039 1.3E-08 51.0 7.2 56 105-167 15-76 (99)
445 2b7k_A SCO1 protein; metalloch 97.4 0.0002 6.9E-09 59.7 6.3 34 1-34 46-83 (200)
446 3ixr_A Bacterioferritin comigr 97.4 0.0004 1.4E-08 56.7 8.0 40 209-248 51-91 (179)
447 3ctg_A Glutaredoxin-2; reduced 97.4 0.00028 9.4E-09 54.6 6.3 69 93-167 26-103 (129)
448 2c0d_A Thioredoxin peroxidase 97.4 0.00025 8.5E-09 60.3 6.5 85 103-187 55-181 (221)
449 4g2e_A Peroxiredoxin; redox pr 97.4 0.00012 4.2E-09 58.6 4.2 40 209-248 30-70 (157)
450 3a2v_A Probable peroxiredoxin; 97.4 0.00022 7.4E-09 61.7 5.9 89 98-187 27-159 (249)
451 1xzo_A BSSCO, hypothetical pro 97.4 0.00026 8.8E-09 57.2 6.1 41 208-248 32-75 (174)
452 2c0d_A Thioredoxin peroxidase 97.4 0.00038 1.3E-08 59.1 7.2 65 209-273 56-158 (221)
453 3h8q_A Thioredoxin reductase 3 97.4 0.00061 2.1E-08 51.3 7.7 65 94-167 7-79 (114)
454 2khp_A Glutaredoxin; thioredox 97.3 0.00052 1.8E-08 49.3 6.7 54 107-167 7-65 (92)
455 2pwj_A Mitochondrial peroxired 97.3 0.00015 5E-09 59.0 4.2 62 97-158 37-107 (171)
456 2pn8_A Peroxiredoxin-4; thiore 97.3 0.00051 1.8E-08 57.8 7.7 85 103-187 47-174 (211)
457 4gqc_A Thiol peroxidase, perox 97.3 4.5E-05 1.6E-09 61.6 1.0 48 201-248 25-73 (164)
458 3gv1_A Disulfide interchange p 97.3 0.00017 5.8E-09 57.1 4.3 41 37-81 98-138 (147)
459 2wfc_A Peroxiredoxin 5, PRDX5; 97.3 0.00035 1.2E-08 56.5 6.0 56 103-158 30-95 (167)
460 2pn8_A Peroxiredoxin-4; thiore 97.3 0.00063 2.1E-08 57.3 7.6 40 209-248 48-88 (211)
461 3uma_A Hypothetical peroxiredo 97.3 0.00022 7.7E-09 58.7 4.7 47 202-248 50-98 (184)
462 1n8j_A AHPC, alkyl hydroperoxi 97.2 0.00078 2.7E-08 55.4 7.5 40 209-248 30-70 (186)
463 3nzn_A Glutaredoxin; structura 97.2 0.0008 2.7E-08 49.6 6.5 71 105-185 21-101 (103)
464 3uma_A Hypothetical peroxiredo 97.2 0.00044 1.5E-08 56.9 5.6 52 104-155 56-116 (184)
465 3qpm_A Peroxiredoxin; oxidored 97.2 0.00094 3.2E-08 57.4 7.8 65 209-273 77-180 (240)
466 3qmx_A Glutaredoxin A, glutare 97.2 0.00073 2.5E-08 49.5 6.0 58 210-274 15-78 (99)
467 2yzh_A Probable thiol peroxida 97.2 0.00052 1.8E-08 55.5 5.7 53 104-158 47-106 (171)
468 3ctg_A Glutaredoxin-2; reduced 97.2 0.00082 2.8E-08 51.8 6.4 70 199-274 27-105 (129)
469 3qpm_A Peroxiredoxin; oxidored 97.1 0.0014 4.9E-08 56.2 8.5 65 103-167 76-179 (240)
470 1psq_A Probable thiol peroxida 97.1 0.00057 2E-08 54.8 5.7 54 103-158 41-101 (163)
471 1tp9_A Peroxiredoxin, PRX D (t 97.1 0.00043 1.5E-08 55.5 4.9 37 103-139 34-72 (162)
472 1z6m_A Conserved hypothetical 97.1 0.0017 5.8E-08 52.6 8.5 30 104-133 27-56 (175)
473 3bj5_A Protein disulfide-isome 97.1 0.0036 1.2E-07 49.4 10.0 120 186-310 9-141 (147)
474 1tp9_A Peroxiredoxin, PRX D (t 97.1 0.00044 1.5E-08 55.5 4.8 52 209-260 35-95 (162)
475 3a2v_A Probable peroxiredoxin; 97.1 0.00052 1.8E-08 59.3 5.3 71 203-273 27-136 (249)
476 3msz_A Glutaredoxin 1; alpha-b 97.1 0.001 3.4E-08 47.2 6.0 68 107-187 5-84 (89)
477 2yzh_A Probable thiol peroxida 97.1 0.00094 3.2E-08 53.9 6.4 53 209-263 47-106 (171)
478 3h8q_A Thioredoxin reductase 3 97.0 0.0015 5.2E-08 49.0 6.8 67 199-274 7-81 (114)
479 1psq_A Probable thiol peroxida 97.0 0.00092 3.2E-08 53.5 5.8 38 209-248 42-80 (163)
480 3me7_A Putative uncharacterize 97.0 0.0031 1.1E-07 50.9 9.0 38 104-141 28-68 (170)
481 2khp_A Glutaredoxin; thioredox 97.0 0.0019 6.5E-08 46.2 6.7 55 213-274 8-67 (92)
482 3mng_A Peroxiredoxin-5, mitoch 97.0 0.0005 1.7E-08 56.0 3.9 62 202-263 37-107 (173)
483 1q98_A Thiol peroxidase, TPX; 97.0 0.00072 2.5E-08 54.4 4.8 38 209-248 43-81 (165)
484 3p7x_A Probable thiol peroxida 97.0 0.0012 4E-08 53.1 5.9 55 103-158 45-104 (166)
485 2i3y_A Epididymal secretory gl 97.0 0.00076 2.6E-08 56.9 4.9 40 208-248 55-94 (215)
486 1wik_A Thioredoxin-like protei 96.9 0.0019 6.5E-08 48.1 6.4 64 95-167 6-79 (109)
487 3l4n_A Monothiol glutaredoxin- 96.9 0.003 1E-07 48.5 7.5 68 94-167 4-79 (127)
488 3hd5_A Thiol:disulfide interch 96.9 0.0015 5.2E-08 53.9 6.2 40 208-248 24-63 (195)
489 1q98_A Thiol peroxidase, TPX; 96.9 0.00045 1.5E-08 55.6 2.7 39 103-143 42-81 (165)
490 2r37_A Glutathione peroxidase 96.9 0.001 3.5E-08 55.8 4.9 39 209-248 38-76 (207)
491 3nzn_A Glutaredoxin; structura 96.9 0.00032 1.1E-08 51.7 1.6 66 1-77 25-101 (103)
492 4dvc_A Thiol:disulfide interch 96.9 0.0044 1.5E-07 50.3 8.7 31 103-133 20-50 (184)
493 2lqo_A Putative glutaredoxin R 96.8 0.004 1.4E-07 44.8 7.2 72 107-188 5-82 (92)
494 3zrd_A Thiol peroxidase; oxido 96.8 0.0035 1.2E-07 52.1 7.8 38 209-248 78-116 (200)
495 3mng_A Peroxiredoxin-5, mitoch 96.8 0.00093 3.2E-08 54.4 4.1 55 104-158 43-107 (173)
496 3msz_A Glutaredoxin 1; alpha-b 96.8 0.0018 6.2E-08 45.8 5.3 56 212-274 5-72 (89)
497 2znm_A Thiol:disulfide interch 96.8 0.0022 7.5E-08 52.9 6.2 80 103-187 21-177 (195)
498 3p7x_A Probable thiol peroxida 96.8 0.0031 1E-07 50.6 6.8 37 209-248 46-83 (166)
499 3hz8_A Thiol:disulfide interch 96.7 0.0018 6.3E-08 53.5 5.6 41 103-144 23-63 (193)
500 3tjj_A Peroxiredoxin-4; thiore 96.7 0.002 6.9E-08 55.8 6.0 40 209-248 91-131 (254)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=3.7e-43 Score=357.31 Aligned_cols=268 Identities=14% Similarity=0.203 Sum_probs=234.8
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWL 77 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~~i 77 (346)
|.|||+||++|+++.|.|+++|+.++. +|.++.+| +.++|.+|+|+++||+++|++|....|.|.++. ++|.+|+
T Consensus 460 v~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~-~~l~~fi 537 (780)
T 3apo_A 460 VDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSA-EQILEFI 537 (780)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEECSCSCH-HHHHHHH
T ss_pred EEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcCCceeeecCcccH-HHHHHHH
Confidence 589999999999999999999999843 47777664 578999999999999999999888889998776 5999999
Q ss_pred hccCCccccCceeecCHHHHHHHHhc---CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHh
Q psy160 78 TSQDVFEIKNEIEEVNRRMLDKLLEE---NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARK 151 (346)
Q Consensus 78 ~~~~~p~~~~~v~~l~~~~~~~~~~~---~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~ 151 (346)
.+...| .|..++.++|++++.. +..|+|.||+|||+||+++.|.|+++|+.+++ ++.|+.+| +..+|++
T Consensus 538 ~~~~~~----~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~-~v~~~~vd~~~~~~l~~~ 612 (780)
T 3apo_A 538 EDLRNP----SVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG-LINVGSVDCGQYHSFCTQ 612 (780)
T ss_dssp HHHHSC----SEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHH
T ss_pred Hhhccc----ceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-CeEEEEEECcchHHHHHH
Confidence 998888 8999999999999875 46799999999999999999999999999976 48888876 6789999
Q ss_pred hCCCCcceEEEEecCC-----cceecC-CcchhHHHHHHHhhccccCcEEEccHHHHHH-HHhccceEEEEEEcCCChhh
Q psy160 152 WGVTKLPAVVYFRHRF-----PSIYRG-DLSEEEEVLQWLITQKTEDRIELITRVMLET-MVEETQYLAVYFYKLNCNIC 224 (346)
Q Consensus 152 ~~i~~~Ptl~~~~~g~-----~~~y~g-~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~-~~~~~~~~lv~F~~~~c~~c 224 (346)
++|+++||+++|+.|. +..|+| .++ .++|.+|+.+...+ .+..++.+++++ +++.+++++|.||++||++|
T Consensus 613 ~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~-~~~l~~fi~~~~~~-~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C 690 (780)
T 3apo_A 613 ENVQRYPEIRFYPQKSSKAYQYHSYNGWNRD-AYSLRSWGLGFLPQ-ASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPS 690 (780)
T ss_dssp TTCCSSSEEEEECCCSSSCCSCEECCCSCCS-HHHHHHHHHTTSCC-CSEEECHHHHHHHTTTCSSCEEEEEECTTCHHH
T ss_pred cCCCCCCeEEEEcCCCcCccchhhcCCCCCC-HHHHHHHHhhhccc-ccccCCHHHHHHHHhcCCCeEEEEEECCCCHHH
Confidence 9999999999998764 466999 666 55999999998755 566889999987 56778899999999999999
Q ss_pred HHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeCCeEE-Eeec
Q psy160 225 DQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPL-IFEG 278 (346)
Q Consensus 225 ~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~~-~y~g 278 (346)
+.+.|.++++++++++ ++.++.+ .++.++++|+|.++||+++|++|+.+ .+.|
T Consensus 691 ~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G 747 (780)
T 3apo_A 691 QNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWE 747 (780)
T ss_dssp HHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHhcC-CceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCccccccC
Confidence 9999999999999986 7888888 57889999999999999999888643 3555
No 2
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=6.8e-37 Score=284.34 Aligned_cols=278 Identities=15% Similarity=0.283 Sum_probs=230.0
Q ss_pred eecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcCChHHHHhcCCCCCCeEEEEeC--CceeeecCCCCCHHHHHHHHhc
Q psy160 2 YINDENCPECDDILEELEHIDGDADQYGIDMVKISDTEAAAKYNIINLPSLVYFRK--QVPLLYDGDLFDEEKILTWLTS 79 (346)
Q Consensus 2 ~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~~c~~~~i~~~Ptl~~f~~--~~~~~y~G~~~~~~~i~~~i~~ 79 (346)
-|+.+.+..+ ...|.++|+.+ .++.|+.+.+.++|++|++.. |++++|++ ..+..|.|.++. ++|.+|+..
T Consensus 41 gff~~~~~~~---~~~f~~~A~~~--~~~~F~~t~~~~v~~~~~v~~-~~i~lfk~f~~~~~~~~g~~~~-~~i~~fi~~ 113 (361)
T 3uem_A 41 GFFKDVESDS---AKQFLQAAEAI--DDIPFGITSNSDVFSKYQLDK-DGVVLFKKFDEGRNNFEGEVTK-ENLLDFIKH 113 (361)
T ss_dssp EECSCTTSHH---HHHHHHHHHHC--SSSCEEEECCHHHHHHTTCSS-SEEEEEESSTTSEEECCSCCCH-HHHHHHHHH
T ss_pred EEEcCCCchH---HHHHHHHHhcC--CCceEEEECcHHHHHHhCCCC-CeEEEEEecCCCccccCCcCCH-HHHHHHHHH
Confidence 4666555433 45788999987 368999999999999999998 99999997 678899998765 699999999
Q ss_pred cCCccccCceeecCHHHHHHHHhcC-CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-----ChhhHHhhC
Q psy160 80 QDVFEIKNEIEEVNRRMLDKLLEEN-EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-----DPRYARKWG 153 (346)
Q Consensus 80 ~~~p~~~~~v~~l~~~~~~~~~~~~-~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-----~~~l~~~~~ 153 (346)
+..| .+.+++.+++.+++.+. +.++++||++||++|+++.|.|+++|+.+++. +.|+.+| ++++|+.||
T Consensus 114 ~~~p----~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~~~~~~~~~fg 188 (361)
T 3uem_A 114 NQLP----LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHTDNQRILEFFG 188 (361)
T ss_dssp HSSC----SEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSGGGHHHHHHTT
T ss_pred cCCC----cceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChHHHHHHHHHcC
Confidence 9999 99999999999998765 57799999999999999999999999999764 7888765 567999999
Q ss_pred CCC--cceEEEEecCC-cceec---CCcchhHHHHHHHhhccc-----------------cCcEEEccHHHHHHHH-hcc
Q psy160 154 VTK--LPAVVYFRHRF-PSIYR---GDLSEEEEVLQWLITQKT-----------------EDRIELITRVMLETMV-EET 209 (346)
Q Consensus 154 i~~--~Ptl~~~~~g~-~~~y~---g~~~~~~~i~~fi~~~~~-----------------~~~v~~l~~~~~~~~~-~~~ 209 (346)
|++ +|+++++..|. ...|. |.++ .++|.+|+.+... ...+..++.+++++++ +.+
T Consensus 189 i~~~~~P~~~~~~~~~~~~ky~~~~~~~~-~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~ 267 (361)
T 3uem_A 189 LKKEECPAVRLITLEEEMTKYKPESEELT-AERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEK 267 (361)
T ss_dssp CCTTTCSEEEEEECC--CCEECCSSCCCC-HHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTT
T ss_pred CCccCCccEEEEEcCCcccccCCCccccC-HHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCC
Confidence 998 99999999754 55675 6677 4599999987431 1347789999999975 578
Q ss_pred ceEEEEEEcCCChhhHHHHHHHHHHHhhcCcC-ceEEEEE-cChhhhhhCCCccccEEEEEeCC---eEEEeecCccccc
Q psy160 210 QYLAVYFYKLNCNICDQILEGLEKVDDECDIY-GIHMVKI-QDPQLAKRYSIKTFPALVYFRNG---NPLIFEGENKILK 284 (346)
Q Consensus 210 ~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~-~i~~~~i-~~~~~~~~~~i~~~Pti~~~~~g---~~~~y~g~~~~~~ 284 (346)
++++|.||||||++|+.+.|.|+++++.+++. ++.++.+ .....+++|+|+++||+++|++| .+..|.|.++.+.
T Consensus 268 k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~ 347 (361)
T 3uem_A 268 KNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDG 347 (361)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEEEEECSSSSCCCEECCSCSSHHH
T ss_pred CcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCeEEEEECCCCcceeEecCCCCHHH
Confidence 89999999999999999999999999999753 4899998 23333789999999999999655 3688999886433
Q ss_pred cchhhhhhhcc
Q psy160 285 GTYIGTYISTK 295 (346)
Q Consensus 285 ~~~~~~~i~~~ 295 (346)
+..|++..
T Consensus 348 ---l~~~l~~~ 355 (361)
T 3uem_A 348 ---FKKFLESG 355 (361)
T ss_dssp ---HHHHHTTT
T ss_pred ---HHHHHHhc
Confidence 66666654
No 3
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=2.8e-36 Score=290.66 Aligned_cols=280 Identities=14% Similarity=0.312 Sum_probs=227.7
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCc-eeeecCCCCCHHHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQV-PLLYDGDLFDEEKILTW 76 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~-~~~y~G~~~~~~~i~~~ 76 (346)
|+||||||+||+++.|+|+++++.++.. +.++.+| ++++|++|+|+++||+++|++|. +..|.|.+.. ++|.+|
T Consensus 26 v~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~g~~~~~~~G~~~~-~~l~~~ 103 (481)
T 3f8u_A 26 VEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTA-DGIVSH 103 (481)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEECCSCSSH-HHHHHH
T ss_pred EEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCceeeeecCccCH-HHHHHH
Confidence 6899999999999999999999998543 6666664 78999999999999999999994 6689998776 699999
Q ss_pred HhccCCccccCceeec-CHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCC
Q psy160 77 LTSQDVFEIKNEIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVT 155 (346)
Q Consensus 77 i~~~~~p~~~~~v~~l-~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~ 155 (346)
+.+...| .+.++ +.+++++++..++.++|.|+.++|..+ .+.|.++|..+++ .+.|+.+....+++++++.
T Consensus 104 ~~~~~~~----~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~-~~~F~~~~~~~~~~~~~v~ 175 (481)
T 3f8u_A 104 LKKQAGP----ASVPLRTEEEFKKFISDKDASIVGFFDDSFSEA---HSEFLKAASNLRD-NYRFAHTNVESLVNEYDDN 175 (481)
T ss_dssp HHHHTSC----SEEEECSHHHHHHHTTSSSCEEEEEESCTTCHH---HHHHHHHHHHHTT-TSCEEEECCHHHHHHHCSS
T ss_pred HHhhccc----CceecCCHHHHHHHHhcCCcEEEEEECCCccch---HHHHHHHHHHhcc-CceEEEECCHHHHHHhCCC
Confidence 9999988 78888 678999999999999999999887654 5788899988854 3889999999999999999
Q ss_pred CcceEEEEe--------cCCcceec-CCcchhHHHHHHHhhcc-------------------------------------
Q psy160 156 KLPAVVYFR--------HRFPSIYR-GDLSEEEEVLQWLITQK------------------------------------- 189 (346)
Q Consensus 156 ~~Ptl~~~~--------~g~~~~y~-g~~~~~~~i~~fi~~~~------------------------------------- 189 (346)
..| +++|+ ++.+..|+ |..+ .++|.+|+..+.
T Consensus 176 ~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~-~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~~~~v~~~~~~~~~~~~~~~ 253 (481)
T 3f8u_A 176 GEG-IILFRPSHLTNKFEDKTVAYTEQKMT-SGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSN 253 (481)
T ss_dssp SEE-EEEECCGGGCBTTBCSEEECCCSSCC-HHHHHHHHHHHTTTTSCEECTTTHHHHTTSSEEEEEECCCTTTCHHHHH
T ss_pred CCc-EEEEecccccCccCCcccccCCCCCC-HHHHHHHHHHhCCCCccccChhHHHHhcCCCceEEEEecccccchhhHH
Confidence 866 77777 23466787 5555 447877776510
Q ss_pred --------------------------------------------------------------------------------
Q psy160 190 -------------------------------------------------------------------------------- 189 (346)
Q Consensus 190 -------------------------------------------------------------------------------- 189 (346)
T Consensus 254 ~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~~~~~ky~~~~~~t~e~~~l~~f~~~~~ 333 (481)
T 3f8u_A 254 YWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYF 333 (481)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEECSSSCEEECCSCCCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEcCCCcccCCCcccCccHHHHHHHHHHHh
Confidence
Q ss_pred ----------------ccCcEEEccHHHHHHHHhc-cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcC-ceEEEEE--c
Q psy160 190 ----------------TEDRIELITRVMLETMVEE-TQYLAVYFYKLNCNICDQILEGLEKVDDECDIY-GIHMVKI--Q 249 (346)
Q Consensus 190 ----------------~~~~v~~l~~~~~~~~~~~-~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~-~i~~~~i--~ 249 (346)
....+..++.++|++++.+ +++++|.|||+||++|+.+.|.|+++++.+.+. ++.++.+ .
T Consensus 334 ~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~ 413 (481)
T 3f8u_A 334 DGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDAT 413 (481)
T ss_dssp HTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred cCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECC
Confidence 0124556777888886544 789999999999999999999999999999753 5889988 3
Q ss_pred ChhhhhhCCCccccEEEEEeCCe---EEEeecCccccccchhhhhhhcc
Q psy160 250 DPQLAKRYSIKTFPALVYFRNGN---PLIFEGENKILKGTYIGTYISTK 295 (346)
Q Consensus 250 ~~~~~~~~~i~~~Pti~~~~~g~---~~~y~g~~~~~~~~~~~~~i~~~ 295 (346)
..+++++|+|.++||+++|++|. +..|.|.++.+. +..|++..
T Consensus 414 ~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~---l~~~l~~~ 459 (481)
T 3f8u_A 414 ANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSD---FISYLQRE 459 (481)
T ss_dssp SSCCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHH---HHHHHHHH
T ss_pred chhhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHH---HHHHHHHh
Confidence 44789999999999999998775 688999986433 55555554
No 4
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=6.2e-37 Score=311.53 Aligned_cols=290 Identities=12% Similarity=0.163 Sum_probs=242.7
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCc---eeeecCCCCCHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQV---PLLYDGDLFDEEKIL 74 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~---~~~y~G~~~~~~~i~ 74 (346)
|.|+++.|. | .+.++++++|+.++..++.|+.+| +.++|+++++.. |++++|++.. +..|.|.... ++|.
T Consensus 356 v~F~~~~~~-~-~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~-p~i~l~~~~~~e~~~~~~g~~~~-~~i~ 431 (780)
T 3apo_A 356 VFFHFGKNE-N-ANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQ-PSLAVFKGQGTKEYEIHHGKKIL-YDIL 431 (780)
T ss_dssp EEEECC-------CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCS-CEEEEEESSTTSSEEECCSCCCH-HHHH
T ss_pred EEEecCCcc-c-cchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccC-ChhhhccCCCcceeeecccHhhH-HHHH
Confidence 467776653 2 345789999998866678887764 678999999987 9999999854 6789998655 6999
Q ss_pred HHHhccCCccccCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHh
Q psy160 75 TWLTSQDVFEIKNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARK 151 (346)
Q Consensus 75 ~~i~~~~~p~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~ 151 (346)
+|+.....| .|.+++.++|+++ .+++++|.||++||++|+++.|.|+++|+.+++ ++.|+.+| ++.+|++
T Consensus 432 ~f~~~~~~~----~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~ 504 (780)
T 3apo_A 432 AFAKESVNS----HVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNM 504 (780)
T ss_dssp HHHHHHHTS----CEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHH
T ss_pred HHhhhccCC----CCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHH
Confidence 999998888 8999999999887 778999999999999999999999999999864 47888775 6789999
Q ss_pred hCCCCcceEEEEecCCcceecCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHhc---cceEEEEEEcCCChhhHHHH
Q psy160 152 WGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEE---TQYLAVYFYKLNCNICDQIL 228 (346)
Q Consensus 152 ~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~---~~~~lv~F~~~~c~~c~~~~ 228 (346)
|||+++||++++++|+...|.|.++.+ +|.+|+.+...+ .|..++.++|++++.. +..++|.||+|||++|+.+.
T Consensus 505 ~~v~~~Pt~~~~~~g~~~~~~g~~~~~-~l~~fi~~~~~~-~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~ 582 (780)
T 3apo_A 505 YNIQAYPTTVVFNQSSIHEYEGHHSAE-QILEFIEDLRNP-SVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLM 582 (780)
T ss_dssp TTCCSSSEEEEEETTEEEEECSCSCHH-HHHHHHHHHHSC-SEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHH
T ss_pred cCCCcCCeEEEEcCCceeeecCcccHH-HHHHHHHhhccc-ceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhh
Confidence 999999999999888888899998854 999999998876 6778999999998654 56799999999999999999
Q ss_pred HHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeCCe-----EEEeec-CccccccchhhhhhhccCCCC
Q psy160 229 EGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGN-----PLIFEG-ENKILKGTYIGTYISTKAFSL 299 (346)
Q Consensus 229 ~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~-----~~~y~g-~~~~~~~~~~~~~i~~~~~~~ 299 (346)
|.|+++|+.+++ .+.|+.+ .+..+|++++|+++|++++|+.|. +..|.| .++.+. +..|+.....+.
T Consensus 583 p~~~~lA~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~---l~~fi~~~~~~~ 658 (780)
T 3apo_A 583 PEWKRMARTLTG-LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYS---LRSWGLGFLPQA 658 (780)
T ss_dssp HHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHH---HHHHHHTTSCCC
T ss_pred HHHHHHHHHhhC-CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHH---HHHHHhhhcccc
Confidence 999999999987 7999998 567889999999999999998763 578999 665333 778888776666
Q ss_pred CCcccCCC
Q psy160 300 IPFCFSEK 307 (346)
Q Consensus 300 ~~~~~~~~ 307 (346)
+.+++.++
T Consensus 659 v~~l~~~~ 666 (780)
T 3apo_A 659 SIDLTPQT 666 (780)
T ss_dssp SEEECHHH
T ss_pred cccCCHHH
Confidence 66666554
No 5
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=2.8e-35 Score=285.23 Aligned_cols=283 Identities=14% Similarity=0.286 Sum_probs=213.4
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCc---eeeecCCCCCHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQV---PLLYDGDLFDEEKIL 74 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~---~~~y~G~~~~~~~i~ 74 (346)
|+||||||+||+++.|.|+++++.+...++.++.+| +.++|.+|+|+++||+++|++|. +..|.|.+.. ++|.
T Consensus 36 v~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~-~~l~ 114 (504)
T 2b5e_A 36 AEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTA-EAIV 114 (504)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTCTTCEEECCSCCSH-HHHH
T ss_pred EEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEeCCccccceeecCCCCH-HHHH
Confidence 689999999999999999999999965578888775 68999999999999999999987 7789998776 5999
Q ss_pred HHHhccCCccccCceeecCH------------------------------------------------------------
Q psy160 75 TWLTSQDVFEIKNEIEEVNR------------------------------------------------------------ 94 (346)
Q Consensus 75 ~~i~~~~~p~~~~~v~~l~~------------------------------------------------------------ 94 (346)
+|+.+...| .+..++.
T Consensus 115 ~~l~~~~~~----~v~~i~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~i~l~~ 190 (504)
T 2b5e_A 115 QFMIKQSQP----AVAVVADLPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHFNDYDFVSAENADDDFKLSIYLPS 190 (504)
T ss_dssp HHHHHHTSC----SEEECSCHHHHHHHSCCSSCEEEEEESCCHHHHHHHHHHHHHTTTTCEEEEEECTTSCCEEEEEETT
T ss_pred HHHHHhcCC----cceeHHHHHHHHhcCCCceEEEEEeCCCCchHHHHHHHHHHHhhcCcEEEEEHHHHHhcCCeEEecC
Confidence 999887765 4444433
Q ss_pred --------------------------------------HHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCC
Q psy160 95 --------------------------------------RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNM 136 (346)
Q Consensus 95 --------------------------------------~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~ 136 (346)
++++++...+.+++++|+.+.... ..+.+.++++|+.+++
T Consensus 191 ~~~~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~l~~~a~~~~~- 268 (504)
T 2b5e_A 191 AMDEPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGYLFYNDEEEL-EEYKPLFTELAKKNRG- 268 (504)
T ss_dssp EEEEEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHTTSCEEEEEESSHHHH-HHHHHHHHHHHHHTTT-
T ss_pred CCCcccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcCCCcEEEEEecCcccH-HHHHHHHHHHHHhcCC-
Confidence 333333333334444444432111 5677888889988865
Q ss_pred CcEEEEeC---ChhhHHhhCC-CCcceEEEEecCCccee--c--CC-----------cchhHHHHHHHhhccc-------
Q psy160 137 DITFVKMA---DPRYARKWGV-TKLPAVVYFRHRFPSIY--R--GD-----------LSEEEEVLQWLITQKT------- 190 (346)
Q Consensus 137 ~i~~~~~~---~~~l~~~~~i-~~~Ptl~~~~~g~~~~y--~--g~-----------~~~~~~i~~fi~~~~~------- 190 (346)
++.|+.+| .+.+++.||+ ..+|++++++......| . +. .+ .+.+.+|+.+...
T Consensus 269 ~i~F~~id~~~~~~~~~~~gl~~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~-~~~l~~f~~~~~~g~~~p~~ 347 (504)
T 2b5e_A 269 LMNFVSIDARKFGRHAGNLNMKEQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLE-SKAIESLVKDFLKGDASPIV 347 (504)
T ss_dssp TCEEEEEEHHHHTTHHHHTTCCSCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCC-HHHHHHHHHHHHHTCCCCCC
T ss_pred eeEEEEEehhhhHHHHHHcCCcccCCEEEEEeCCcCcccCCCCCccchhhccccccccC-HHHHHHHHHHHHcCCCChhh
Confidence 38888877 4568999999 45899999986443334 3 33 44 4589999876321
Q ss_pred ---------cCcEEEccHHHHHHHH-hccceEEEEEEcCCChhhHHHHHHHHHHHhhcC--cCceEEEEE--cChhhhhh
Q psy160 191 ---------EDRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECD--IYGIHMVKI--QDPQLAKR 256 (346)
Q Consensus 191 ---------~~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~--~~~i~~~~i--~~~~~~~~ 256 (346)
.+.+..++.++|++.+ +.+++++|.|||+||++|+.+.|.|+++++.+. ..++.++.+ ......+
T Consensus 348 ~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~- 426 (504)
T 2b5e_A 348 KSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG- 426 (504)
T ss_dssp CCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSS-
T ss_pred hcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcccccc-
Confidence 1467889999999975 568899999999999999999999999999886 236888888 2223444
Q ss_pred CCCccccEEEEEeCCe---EEEeecCccccccchhhhhhhcc
Q psy160 257 YSIKTFPALVYFRNGN---PLIFEGENKILKGTYIGTYISTK 295 (346)
Q Consensus 257 ~~i~~~Pti~~~~~g~---~~~y~g~~~~~~~~~~~~~i~~~ 295 (346)
|+|+++||+++|++|+ ...|.|.++.+. +..|++..
T Consensus 427 ~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~---l~~~i~~~ 465 (504)
T 2b5e_A 427 VVIEGYPTIVLYPGGKKSESVVYQGSRSLDS---LFDFIKEN 465 (504)
T ss_dssp CCCSSSSEEEEECCTTSCCCCBCCSCCCHHH---HHHHHHHH
T ss_pred CCceecCeEEEEeCCceecceEecCCCCHHH---HHHHHHhc
Confidence 9999999999999885 677999886433 55566554
No 6
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=2.3e-34 Score=266.22 Aligned_cols=257 Identities=16% Similarity=0.214 Sum_probs=219.9
Q ss_pred CeecCCCChhhHHHHHH-------HHHHHhhhcccCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCH
Q psy160 1 MYINDENCPECDDILEE-------LEHIDGDADQYGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDE 70 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~-------~~~~a~~~~~~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~ 70 (346)
|+||||||+ |++++|+ |+++++.++..+|.++++| ++++|++|+|+++||+++|++|.+..|.|.++.
T Consensus 33 V~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~G~~~~- 110 (350)
T 1sji_A 33 LYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKGDRTIEFDGEFAA- 110 (350)
T ss_dssp EEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEEEEECSCCCH-
T ss_pred EEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCccceEEEEECCcEEEecCCCCH-
Confidence 689999999 9989888 8999999865578887765 689999999999999999999998899998776
Q ss_pred HHHHHHHhccCCccccCceeecC-HHHHHHHHh-cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhh
Q psy160 71 EKILTWLTSQDVFEIKNEIEEVN-RRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRY 148 (346)
Q Consensus 71 ~~i~~~i~~~~~p~~~~~v~~l~-~~~~~~~~~-~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l 148 (346)
++|.+|+.+...| .+.+++ .+++++++. +++.++|.|+++||. ...+.|.++|..+++ ++.|+.+.++++
T Consensus 111 ~~l~~~i~~~~~~----~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~-~~~f~~~~~~~~ 182 (350)
T 1sji_A 111 DVLVEFLLDLIED----PVEIINSKLEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEAAEHFQP-YIKFFATFDKGV 182 (350)
T ss_dssp HHHHHHHHTTSSC----SEEECCSHHHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHHHHHTTT-TSEEEEECCHHH
T ss_pred HHHHHHHHHhcCC----cceeccchHHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHHHHhhcc-CcEEEEECCHHH
Confidence 5999999999988 888885 789999998 778899999999865 456899999998854 488999999999
Q ss_pred HHhhCCCCcceEEEEec--CCcceecCC-cchhHHHHHHHhhccccCcEEEccHHHHHHHHhcc--ceEEEEEEcCCChh
Q psy160 149 ARKWGVTKLPAVVYFRH--RFPSIYRGD-LSEEEEVLQWLITQKTEDRIELITRVMLETMVEET--QYLAVYFYKLNCNI 223 (346)
Q Consensus 149 ~~~~~i~~~Ptl~~~~~--g~~~~y~g~-~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~--~~~lv~F~~~~c~~ 223 (346)
|++++|+ +|++++|++ +.+..|+|. ++ .++|.+|+.++..| .+..++.+++.++..+. +..++.|+.+||++
T Consensus 183 ~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~-~~~l~~fi~~~~~p-~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~ 259 (350)
T 1sji_A 183 AKKLSLK-MNEVDFYEPFMDEPIAIPDKPYT-EEELVEFVKEHQRP-TLRRLRPEDMFETWEDDLNGIHIVAFAERSDPD 259 (350)
T ss_dssp HHHHTCC-TTCEEEECTTCSSCEECSSSSCC-HHHHHHHHHHHCCC-SEEECCTTTHHHHHHSCSSSEEEEEECCTTSHH
T ss_pred HHHcCCC-CCcEEEEeCCCCCceecCCCCCC-HHHHHHHHHHcCcc-chhhcChhhHHHHhcCCCCCcEEEEEEcCCCcc
Confidence 9999999 999999987 347789997 65 55999999999877 77899999999887652 44556699999999
Q ss_pred hHHHHHHHHHHHhhcCc-CceEEEEE---cChhhh----hhCCCc-cccEEEEEeC
Q psy160 224 CDQILEGLEKVDDECDI-YGIHMVKI---QDPQLA----KRYSIK-TFPALVYFRN 270 (346)
Q Consensus 224 c~~~~~~~~~la~~~~~-~~i~~~~i---~~~~~~----~~~~i~-~~Pti~~~~~ 270 (346)
|..+.+.++++|+++++ .++.|+.+ ..+.++ +.||+. ++|++++++.
T Consensus 260 ~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~ 315 (350)
T 1sji_A 260 GYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNV 315 (350)
T ss_dssp HHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEES
T ss_pred HHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEec
Confidence 99999999999999973 36888888 445566 789998 5899999975
No 7
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=5.1e-34 Score=265.21 Aligned_cols=259 Identities=16% Similarity=0.217 Sum_probs=218.1
Q ss_pred CeecCCCChhh---HHHH---HHHHHHHhhhcccCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHH
Q psy160 1 MYINDENCPEC---DDIL---EELEHIDGDADQYGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEE 71 (346)
Q Consensus 1 v~Fy~~~C~~c---~~~~---~~~~~~a~~~~~~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~ 71 (346)
|+||||||+|| +++. |.++++++.++..+|.++++| ++++|++|+|++|||+++|++|.+..|.|.+.. +
T Consensus 35 V~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~~~~y~G~~~~-~ 113 (367)
T 3us3_A 35 LLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEVIEYDGEFSA-D 113 (367)
T ss_dssp EEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEEEECCSCCSH-H
T ss_pred EEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCcCceEEEEECCcEEEeCCCCCH-H
Confidence 68999999996 3333 689999999866678888775 689999999999999999999999999998876 5
Q ss_pred HHHHHHhccCCccccCceeecC-HHHHHHHHh-cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhH
Q psy160 72 KILTWLTSQDVFEIKNEIEEVN-RRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYA 149 (346)
Q Consensus 72 ~i~~~i~~~~~p~~~~~v~~l~-~~~~~~~~~-~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~ 149 (346)
+|++|+.+...| .+..++ .+++++++. +++.++|.|+++||+ ...+.|.++|..+++ .+.|+.+.+..++
T Consensus 114 ~i~~~i~~~~~~----~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~-~~~F~~~~~~~~~ 185 (367)
T 3us3_A 114 TLVEFLLDVLED----PVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHP-YIPFFATFDSKVA 185 (367)
T ss_dssp HHHHHHHHHHSC----SEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTT-TSCEEEECCHHHH
T ss_pred HHHHHHHHhcCC----CcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcC-CcEEEEECCHHHH
Confidence 999999999888 888885 689999998 678899999999876 567789999998865 3889999999999
Q ss_pred HhhCCCCcceEEEEec--CCcceecCC-cchhHHHHHHHhhccccCcEEEccHHHHHHHHhc--cceEEEEEEcCCChhh
Q psy160 150 RKWGVTKLPAVVYFRH--RFPSIYRGD-LSEEEEVLQWLITQKTEDRIELITRVMLETMVEE--TQYLAVYFYKLNCNIC 224 (346)
Q Consensus 150 ~~~~i~~~Ptl~~~~~--g~~~~y~g~-~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~--~~~~lv~F~~~~c~~c 224 (346)
++|+|+. |+|++|+. +.+..|.|. ++ .++|.+|+..+..| .+..++.+++.+++.+ .++.++.|+.++|..+
T Consensus 186 ~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~-~~~l~~fi~~~~~p-~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 262 (367)
T 3us3_A 186 KKLTLKL-NEIDFYEAFMEEPVTIPDKPNS-EEEIVNFVEEHRRS-TLRKLKPESMYETWEDDMDGIHIVAFAEEADPDG 262 (367)
T ss_dssp HHHTCCT-TCEEEECTTCSSCEECSSSSCC-HHHHHHHHHHTCSC-SEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHH
T ss_pred HHcCCCC-CeEEEEcCCCCCCeecCCCCCC-HHHHHHHHHHcCcc-ceeecChhhHHHHHhhccCCcEEEEEEcCCChhH
Confidence 9999995 99999997 457889996 55 55999999999887 7789999999887653 4467778999999999
Q ss_pred HHHHHHHHHHHhhcCcC-ceEEEEE---cChhh----hhhCCCc-cccEEEEEeCC
Q psy160 225 DQILEGLEKVDDECDIY-GIHMVKI---QDPQL----AKRYSIK-TFPALVYFRNG 271 (346)
Q Consensus 225 ~~~~~~~~~la~~~~~~-~i~~~~i---~~~~~----~~~~~i~-~~Pti~~~~~g 271 (346)
..+.+.++++|+.+++. ++.|+.+ ..+.. .+.||+. ++|+++++...
T Consensus 263 ~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~ 318 (367)
T 3us3_A 263 YEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVT 318 (367)
T ss_dssp HHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecc
Confidence 99999999999999864 5889988 23322 3458887 89999999743
No 8
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=3.9e-35 Score=256.97 Aligned_cols=206 Identities=21% Similarity=0.381 Sum_probs=179.4
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCC--CcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNM--DITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~--~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
.+.|.+++.++|++++.++++++|+||++||++|+.+.|.|+++++.+.+. ++.++.+| ++.+|++|+|+++||+
T Consensus 14 ~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTI 93 (241)
T ss_dssp ETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEE
Confidence 457999999999999999999999999999999999999999999998543 37777765 7789999999999999
Q ss_pred EEEecCCcceecCCcchhHHHHHHHhhcccc------CcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHH
Q psy160 161 VYFRHRFPSIYRGDLSEEEEVLQWLITQKTE------DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKV 234 (346)
Q Consensus 161 ~~~~~g~~~~y~g~~~~~~~i~~fi~~~~~~------~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~l 234 (346)
++|++|+.+.|.|.++.+ ++.+|+.+...+ ..+..++.++++++++.+++++|.||++||++|+.+.|.+.++
T Consensus 94 ~~~~~g~~~~~~g~~~~~-~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~ 172 (241)
T 3idv_A 94 KILKKGQAVDYEGSRTQE-EIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKA 172 (241)
T ss_dssp EEEETTEEEECCSCSCHH-HHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHH
T ss_pred EEEcCCCcccccCcccHH-HHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHH
Confidence 999999888899999855 899999886543 3577889999999998889999999999999999999999999
Q ss_pred HhhcCcC--ceEEEEE---cChhhhhhCCCccccEEEEEeCCeEEEeecCccccccchhhhhhhcc
Q psy160 235 DDECDIY--GIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENKILKGTYIGTYISTK 295 (346)
Q Consensus 235 a~~~~~~--~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~~~y~g~~~~~~~~~~~~~i~~~ 295 (346)
++.+.+. .+.++.+ .+++++++|+|+++||+++|++|+.+.|.|.++.+ . +..|+...
T Consensus 173 a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~--~-l~~~l~~~ 235 (241)
T 3idv_A 173 AKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYDYNGPREKY--G-IVDYMIEQ 235 (241)
T ss_dssp HHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEECCSCCSHH--H-HHHHHHHH
T ss_pred HHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEEEecCCCCHH--H-HHHHHHhh
Confidence 9998642 3888888 57899999999999999999999999999988633 3 55555543
No 9
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=1e-33 Score=247.95 Aligned_cols=190 Identities=18% Similarity=0.321 Sum_probs=165.3
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccC--CeEEEcC---ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYG--IDMVKIS---DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILT 75 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~--i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~ 75 (346)
|+|||+||++|+++.|.|+++++.+...+ +.++.+| +.++|.+|+|+++||+++|++|..+.|.|.+.. +++.+
T Consensus 37 v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~-~~l~~ 115 (241)
T 3idv_A 37 LEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQAVDYEGSRTQ-EEIVA 115 (241)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEECCSCSCH-HHHHH
T ss_pred EEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCCCcccccCcccH-HHHHH
Confidence 68999999999999999999999985443 7777664 679999999999999999999998899998877 58999
Q ss_pred HHhccCCc---cccCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccC--CCcEEEEeC---Chh
Q psy160 76 WLTSQDVF---EIKNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA---DPR 147 (346)
Q Consensus 76 ~i~~~~~p---~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~--~~i~~~~~~---~~~ 147 (346)
|+.+...+ ..+..+..++.++|++++.++++++|.||++||++|+.+.|.|.++++.+.+ .++.++.+| +++
T Consensus 116 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~ 195 (241)
T 3idv_A 116 KVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD 195 (241)
T ss_dssp HHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH
T ss_pred HHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH
Confidence 99876544 2345788899999999999999999999999999999999999999999843 237777765 789
Q ss_pred hHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHHHhhccccC
Q psy160 148 YARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTED 192 (346)
Q Consensus 148 l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~~~~~ 192 (346)
++++|+|.++||+++|++|+.+.|.|.++.+ +|.+|+.+...+.
T Consensus 196 l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~-~l~~~l~~~~~~~ 239 (241)
T 3idv_A 196 LAKRFDVSGYPTLKIFRKGRPYDYNGPREKY-GIVDYMIEQSGAA 239 (241)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEECCSCCSHH-HHHHHHHHHTTCT
T ss_pred HHHHcCCcccCEEEEEECCeEEEecCCCCHH-HHHHHHHhhhCCC
Confidence 9999999999999999999988899998844 9999999887653
No 10
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-31 Score=247.70 Aligned_cols=262 Identities=12% Similarity=0.163 Sum_probs=196.2
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcc-----cCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCcee--eecCCCCCH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQ-----YGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQVPL--LYDGDLFDE 70 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~-----~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~~~--~y~G~~~~~ 70 (346)
|+||||||+||+++.|+|+++++.+.. .++.++.+| +.++|.+|+|+++||+++|++|... .|.|.+..
T Consensus 27 V~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~- 105 (382)
T 2r2j_A 27 VNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSV- 105 (382)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEEECCSCCSH-
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCEEEEEeCCcEeeeeecCcchH-
Confidence 689999999999999999999999842 237777765 6899999999999999999999865 59998776
Q ss_pred HHHHHHHhccCCccccCceeecC-HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhH
Q psy160 71 EKILTWLTSQDVFEIKNEIEEVN-RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYA 149 (346)
Q Consensus 71 ~~i~~~i~~~~~p~~~~~v~~l~-~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~ 149 (346)
++|.+|+.+...| .+..++ .++++. +..++.++|.|+++++.. ..+.|.++|..+++. +.|+.+.. +++
T Consensus 106 ~~l~~~i~~~~~~----~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~~~~~~-~~F~~~~~-~~~ 175 (382)
T 2r2j_A 106 KALADYIRQQKSD----PIQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVANILHDD-CAFLSAFG-DVS 175 (382)
T ss_dssp HHHHHHHHHHHSC----CCEEC-------------CCEEEEEESCSSSH---HHHHHHHHHHHHTTT-CEEEEEES-CC-
T ss_pred HHHHHHHHHhccC----CceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHHHhhcc-ceEEEEeh-hhH
Confidence 5999999998887 778885 467887 667788999999988664 356899999988543 66665544 578
Q ss_pred HhhCCCCcceEEEEecC---CcceecCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHhccceEEEEEEcCCCh-hhH
Q psy160 150 RKWGVTKLPAVVYFRHR---FPSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCN-ICD 225 (346)
Q Consensus 150 ~~~~i~~~Ptl~~~~~g---~~~~y~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~-~c~ 225 (346)
++++++++| ++++..+ ....|.|.+.+.++|.+|+..+..| .+..++.+++.+++.+..++++.|+.++|. .++
T Consensus 176 ~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p-~v~elt~~~~~~~~~~~~~~~v~f~~~~~~~~~~ 253 (382)
T 2r2j_A 176 KPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVP-LVREITFENGEELTEEGLPFLILFHMKEDTESLE 253 (382)
T ss_dssp -------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSC-SSEECCHHHHHHHHTTCCCEEEEEECTTCCHHHH
T ss_pred HhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccC-ceEecChhhHHHHhcCCCcEEEEEecCCchHHHH
Confidence 899999999 6666542 3677999983356999999999877 677999999999988888999999999874 455
Q ss_pred HHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCc--cccEEEEEeCCeEEEe
Q psy160 226 QILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIK--TFPALVYFRNGNPLIF 276 (346)
Q Consensus 226 ~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~--~~Pti~~~~~g~~~~y 276 (346)
.+...+.+++..+++ .+.|+.+ ....+++.||++ ++|+++++..++...|
T Consensus 254 ~~~~~~~~~~~~~~~-~i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~~~y~~ 308 (382)
T 2r2j_A 254 IFQNEVARQLISEKG-TINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHMYVF 308 (382)
T ss_dssp HHHHHHHHHTGGGTT-TSEEEEEETTTTHHHHHHTTCCGGGCSEEEEECSSCEEEC
T ss_pred HHHHHHHHHHHHhCC-eeEEEEEchHHhHHHHHHcCCCccCCCEEEEEcchhcCCC
Confidence 666777777777776 7999998 456678899997 6899999876554334
No 11
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.97 E-value=6.5e-31 Score=244.28 Aligned_cols=218 Identities=15% Similarity=0.217 Sum_probs=186.6
Q ss_pred ccCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHH---HH---HHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCC
Q psy160 85 IKNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVK---VL---ERLEKIDGETDNMDITFVKMA---DPRYARKWGVT 155 (346)
Q Consensus 85 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~---~~---~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~ 155 (346)
..+.|.+||.++|++++.++++++|.||||||+||.. +. |.|+++++.+++.++.++++| ++.+|++|+|+
T Consensus 11 ~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~ 90 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLT 90 (367)
T ss_dssp CCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCC
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCC
Confidence 4557999999999999999999999999999999732 22 689999999876568898887 78999999999
Q ss_pred CcceEEEEecCCcceecCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHh-ccceEEEEEEcCCChhhHHHHHHHHHH
Q psy160 156 KLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKV 234 (346)
Q Consensus 156 ~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~c~~c~~~~~~~~~l 234 (346)
++||+++|++|++..|.|.++.+ +|++|+.+...+.+....+.++++++++ +++.++|.|+++||+ ...+.|.++
T Consensus 91 ~~PTl~~f~~G~~~~y~G~~~~~-~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~ 166 (367)
T 3us3_A 91 EEDSIYVFKEDEVIEYDGEFSAD-TLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEA 166 (367)
T ss_dssp STTEEEEEETTEEEECCSCCSHH-HHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHH
T ss_pred cCceEEEEECCcEEEeCCCCCHH-HHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHH
Confidence 99999999999988999999855 9999999998875544446789999988 678999999999876 557899999
Q ss_pred HhhcCcCceEEEEEcChhhhhhCCCccccEEEEEeC--CeEEEeecC-ccccccchhhhhhhccCCCCCCcccCCCCCCc
Q psy160 235 DDECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRN--GNPLIFEGE-NKILKGTYIGTYISTKAFSLIPFCFSEKHPGA 311 (346)
Q Consensus 235 a~~~~~~~i~~~~i~~~~~~~~~~i~~~Pti~~~~~--g~~~~y~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 311 (346)
|..+++ .+.|+.+.+.+++++|+++. |+|++|++ +.+..|.|. ++.+ .+..|++....|++++++.++...+
T Consensus 167 A~~~~~-~~~F~~~~~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~---~l~~fi~~~~~p~v~elt~~~~~~~ 241 (367)
T 3us3_A 167 AEEFHP-YIPFFATFDSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEE---EIVNFVEEHRRSTLRKLKPESMYET 241 (367)
T ss_dssp HHHHTT-TSCEEEECCHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHH---HHHHHHHHTCSCSEEECCGGGHHHH
T ss_pred HHhhcC-CcEEEEECCHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHH---HHHHHHHHcCccceeecChhhHHHH
Confidence 999986 78999998899999999985 99999997 467899995 5432 3888999999999999999875433
No 12
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.97 E-value=3.6e-30 Score=238.03 Aligned_cols=216 Identities=13% Similarity=0.252 Sum_probs=186.0
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHH-------HHHHHhhccCCCcEEEEeC---ChhhHHhhCCC
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLER-------LEKIDGETDNMDITFVKMA---DPRYARKWGVT 155 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~-------~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~ 155 (346)
.+.|.+|+.++|++.+.++++++|.||||||+ |+.+.|. |+++++.+++.++.++.+| ++++|++|+|+
T Consensus 10 ~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 45788999999999998889999999999999 9988888 9999999865568888876 78899999999
Q ss_pred CcceEEEEecCCcceecCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHh-ccceEEEEEEcCCChhhHHHHHHHHHH
Q psy160 156 KLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKV 234 (346)
Q Consensus 156 ~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~c~~c~~~~~~~~~l 234 (346)
++||+++|++|++..|.|.++.+ +|.+|+.+...+......+.++++++++ +++.++|.|+++||. ...+.|.++
T Consensus 89 ~~Pt~~~~~~g~~~~~~G~~~~~-~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~ 164 (350)
T 1sji_A 89 EEGSLYVLKGDRTIEFDGEFAAD-VLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEA 164 (350)
T ss_dssp STTEEEEEETTEEEEECSCCCHH-HHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHH
T ss_pred ccceEEEEECCcEEEecCCCCHH-HHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHH
Confidence 99999999999988899999855 9999999998875443336789999888 778899999999875 456899999
Q ss_pred HhhcCcCceEEEEEcChhhhhhCCCccccEEEEEeC--CeEEEeecC-ccccccchhhhhhhccCCCCCCcccCCCCCCc
Q psy160 235 DDECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRN--GNPLIFEGE-NKILKGTYIGTYISTKAFSLIPFCFSEKHPGA 311 (346)
Q Consensus 235 a~~~~~~~i~~~~i~~~~~~~~~~i~~~Pti~~~~~--g~~~~y~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 311 (346)
|..+++ ++.|+.+.+++++++++++ +|++++|++ +.+..|.|. ++.+. +..|++....|++++++.++...+
T Consensus 165 A~~~~~-~~~f~~~~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~---l~~fi~~~~~p~v~elt~~~~~~~ 239 (350)
T 1sji_A 165 AEHFQP-YIKFFATFDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEE---LVEFVKEHQRPTLRRLRPEDMFET 239 (350)
T ss_dssp HHHTTT-TSEEEEECCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHH---HHHHHHHHCCCSEEECCTTTHHHH
T ss_pred HHhhcc-CcEEEEECCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHH---HHHHHHHcCccchhhcChhhHHHH
Confidence 999986 7999999899999999999 999999986 457889997 54322 888999999999999999985443
No 13
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.96 E-value=6.9e-29 Score=215.23 Aligned_cols=182 Identities=15% Similarity=0.187 Sum_probs=148.8
Q ss_pred CeecCC-CChhhHHHHHHHHHHHhhhcccCCeEEEcC-----ChHHHHhcCCCCCCeEEEEeCCce--eeecCCCCCHHH
Q psy160 1 MYINDE-NCPECDDILEELEHIDGDADQYGIDMVKIS-----DTEAAAKYNIINLPSLVYFRKQVP--LLYDGDLFDEEK 72 (346)
Q Consensus 1 v~Fy~~-~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-----~~~~c~~~~i~~~Ptl~~f~~~~~--~~y~G~~~~~~~ 72 (346)
|+||++ ||++|+++.|.|+++++..+ +|.++.+| ++++|.+|+|+++||+++|++|.. ..|.|.+.. ++
T Consensus 27 v~f~~~~~C~~C~~~~~~~~~la~~~~--~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~~-~~ 103 (226)
T 1a8l_A 27 IVFVRKDHCQYCDQLKQLVQELSELTD--KLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAG-HE 103 (226)
T ss_dssp EEEECSSSCTTHHHHHHHHHHHHTTCT--TEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCCT-TH
T ss_pred EEEecCCCCchhHHHHHHHHHHHhhCC--ceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCcH-HH
Confidence 579999 99999999999999997533 46666554 578999999999999999998853 578898776 47
Q ss_pred HHHHHhccCCccccCceeecCHHHHHHHHhcCCcE-EEEEECCCChhHHHHHHHHHHHHhhccC---CCcEEEEeC---C
Q psy160 73 ILTWLTSQDVFEIKNEIEEVNRRMLDKLLEENEFV-TVFFYETDHKDSVKVLERLEKIDGETDN---MDITFVKMA---D 145 (346)
Q Consensus 73 i~~~i~~~~~p~~~~~v~~l~~~~~~~~~~~~~~~-lv~F~~~~C~~c~~~~~~~~~~a~~~~~---~~i~~~~~~---~ 145 (346)
+.+|+...... ......+++++++.+...++++ +|.||++||++|+++.|.|+++++.+.. .++.++.+| +
T Consensus 104 l~~~l~~~l~~--~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~ 181 (226)
T 1a8l_A 104 FAAFLEDIVDV--SREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY 181 (226)
T ss_dssp HHHHHHHHHHH--HHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC
T ss_pred HHHHHHHHHhh--cCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC
Confidence 88887764322 1245678999999887776777 9999999999999999999999998851 247777775 7
Q ss_pred hhhHHhhCCCCcceEEEEecCC-cceecCCcchhHHHHHHHhhc
Q psy160 146 PRYARKWGVTKLPAVVYFRHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 146 ~~l~~~~~i~~~Ptl~~~~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+.++++|+|.++||+++|++|+ ...|.|..+.+ ++.+|+.+.
T Consensus 182 ~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~ 224 (226)
T 1a8l_A 182 PEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEK-MFLEKLLSA 224 (226)
T ss_dssp HHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHH-HHHHHHHHH
T ss_pred HHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHH-HHHHHHHHh
Confidence 7899999999999999999887 45689988844 899998764
No 14
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.96 E-value=1.7e-28 Score=212.70 Aligned_cols=187 Identities=15% Similarity=0.214 Sum_probs=151.8
Q ss_pred CHHHHHHHH-h--cCCcEEEEEECC-CChhHHHHHHHHHHHHhhccCCCcEEEEeC-----ChhhHHhhCCCCcceEEEE
Q psy160 93 NRRMLDKLL-E--ENEFVTVFFYET-DHKDSVKVLERLEKIDGETDNMDITFVKMA-----DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 93 ~~~~~~~~~-~--~~~~~lv~F~~~-~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-----~~~l~~~~~i~~~Ptl~~~ 163 (346)
+.+.+++++ . +++.++++||++ ||++|+.+.|.|+++++... ++.++.+| ++++|++|||+++||+++|
T Consensus 8 ~~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~--~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (226)
T 1a8l_A 8 DKKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTD--KLSYEIVDFDTPEGKELAKRYRIDRAPATTIT 85 (226)
T ss_dssp HHHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCT--TEEEEEEETTSHHHHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhhCC--ceEEEEEeCCCcccHHHHHHcCCCcCceEEEE
Confidence 456666766 3 235678999999 99999999999999997532 47777765 5689999999999999999
Q ss_pred ecCC--cceecCCcchhHHHHHHHhhccc-cCcEEEccHHHHHHHHhccceE-EEEEEcCCChhhHHHHHHHHHHHhhcC
Q psy160 164 RHRF--PSIYRGDLSEEEEVLQWLITQKT-EDRIELITRVMLETMVEETQYL-AVYFYKLNCNICDQILEGLEKVDDECD 239 (346)
Q Consensus 164 ~~g~--~~~y~g~~~~~~~i~~fi~~~~~-~~~v~~l~~~~~~~~~~~~~~~-lv~F~~~~c~~c~~~~~~~~~la~~~~ 239 (346)
++|+ ...|.|..... ++.+|+..... ......++.++++.+.+.++++ +|.||++||++|+.+.|.++++++.+.
T Consensus 86 ~~g~~~~~~~~G~~~~~-~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 86 QDGKDFGVRYFGLPAGH-EFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp ETTBCCSEEEESCCCTT-HHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred cCCceeeEEEeccCcHH-HHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 9886 36799987744 78888877543 1234578888998887766777 999999999999999999999999986
Q ss_pred c---CceEEEEE---cChhhhhhCCCccccEEEEEeCCeE-EEeecCccc
Q psy160 240 I---YGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNP-LIFEGENKI 282 (346)
Q Consensus 240 ~---~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~-~~y~g~~~~ 282 (346)
+ .++.++.+ .+++++++|+|+++||+++|++|+. ..|.|.++.
T Consensus 165 ~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 214 (226)
T 1a8l_A 165 KAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPE 214 (226)
T ss_dssp HTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCH
T ss_pred cccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeEEEcCCCCH
Confidence 1 26888888 6788999999999999999999974 457887763
No 15
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.96 E-value=1.9e-28 Score=213.03 Aligned_cols=178 Identities=17% Similarity=0.196 Sum_probs=147.6
Q ss_pred cCCCChhhHHHHHHHHHHHhhhc-ccCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCC-ceeeecCCCCCHHHHHHHHh
Q psy160 4 NDENCPECDDILEELEHIDGDAD-QYGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQ-VPLLYDGDLFDEEKILTWLT 78 (346)
Q Consensus 4 y~~~C~~c~~~~~~~~~~a~~~~-~~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~-~~~~y~G~~~~~~~i~~~i~ 78 (346)
++|||+||+++.|+|+++++++. ...|.++.+| ++++|.+|+|+++||+++|++| .+..|.|.+.. +++.+|+.
T Consensus 33 ~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~~-~~l~~~~~ 111 (229)
T 2ywm_A 33 GCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRYIGLPAG-LEFTTLIN 111 (229)
T ss_dssp TCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSSCCCEEEESCCCT-THHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEECCCcccceecCCccH-HHHHHHHH
Confidence 48999999999999999988773 2357777776 7899999999999999999865 45679998877 48999987
Q ss_pred ccCCccccCceeecCHHHHHHHHhcCCcE-EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCC
Q psy160 79 SQDVFEIKNEIEEVNRRMLDKLLEENEFV-TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGV 154 (346)
Q Consensus 79 ~~~~p~~~~~v~~l~~~~~~~~~~~~~~~-lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i 154 (346)
..... ...+..+++++++.++..++++ ++.||++||++|+.+.|.|++++..+. ++.++.+| +++++++|+|
T Consensus 112 ~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v 187 (229)
T 2ywm_A 112 GIFHV--SQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASENQDLAEQFQV 187 (229)
T ss_dssp HHHHH--HTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGGCHHHHHHTTC
T ss_pred HHHhc--cCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCCCHHHHHHcCC
Confidence 65432 2357789999999988766666 888999999999999999999999873 47777765 7889999999
Q ss_pred CCcceEEEEecCCcceecCCcchhHHHHHHHhhcc
Q psy160 155 TKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 155 ~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
.++||+++ +|+...|.|..+.+ +|.+|+.+..
T Consensus 188 ~~~Pt~~~--~G~~~~~~G~~~~~-~l~~~l~~~~ 219 (229)
T 2ywm_A 188 VGVPKIVI--NKGVAEFVGAQPEN-AFLGYIMAVY 219 (229)
T ss_dssp CSSSEEEE--GGGTEEEESCCCHH-HHHHHHHHHH
T ss_pred cccCEEEE--CCEEEEeeCCCCHH-HHHHHHHHHh
Confidence 99999998 77766699988844 8999987654
No 16
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.96 E-value=7.5e-28 Score=209.23 Aligned_cols=184 Identities=18% Similarity=0.195 Sum_probs=150.7
Q ss_pred HHHHHHHH--hcCCcEEEEEE-----CCCChhHHHHHHHHHHHHhhcc-CCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 94 RRMLDKLL--EENEFVTVFFY-----ETDHKDSVKVLERLEKIDGETD-NMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 94 ~~~~~~~~--~~~~~~lv~F~-----~~~C~~c~~~~~~~~~~a~~~~-~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
.+.+.+++ ...++++|.|| +|||++|+.+.|+|.++++.+. ..++.++.+| ++++|++|+|+++||+++
T Consensus 8 ~~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 87 (229)
T 2ywm_A 8 RMQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVI 87 (229)
T ss_dssp HHHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEE
T ss_pred HHHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEE
Confidence 35566666 33466666666 8999999999999999988772 2348888877 889999999999999999
Q ss_pred EecCC-cceecCCcchhHHHHHHHhhccc-cCcEEEccHHHHHHHHhccceE-EEEEEcCCChhhHHHHHHHHHHHhhcC
Q psy160 163 FRHRF-PSIYRGDLSEEEEVLQWLITQKT-EDRIELITRVMLETMVEETQYL-AVYFYKLNCNICDQILEGLEKVDDECD 239 (346)
Q Consensus 163 ~~~g~-~~~y~g~~~~~~~i~~fi~~~~~-~~~v~~l~~~~~~~~~~~~~~~-lv~F~~~~c~~c~~~~~~~~~la~~~~ 239 (346)
|++|. ...|.|.+... ++.+|+..... ...+..++.++++.+.+.++++ ++.||++||++|+.+.|.+++++..+.
T Consensus 88 ~~~~~~~~~~~G~~~~~-~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~ 166 (229)
T 2ywm_A 88 EGDKDYGIRYIGLPAGL-EFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND 166 (229)
T ss_dssp ESSSCCCEEEESCCCTT-HHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT
T ss_pred ECCCcccceecCCccHH-HHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC
Confidence 98655 67899988755 89999887543 2345678999999987766666 788999999999999999999999983
Q ss_pred cCceEEEEE---cChhhhhhCCCccccEEEEEeCCeEEEeecCccc
Q psy160 240 IYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENKI 282 (346)
Q Consensus 240 ~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~~~y~g~~~~ 282 (346)
++.++.+ .+++++++|+|+++||+++ +|+...|.|.++.
T Consensus 167 --~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~~~~~~G~~~~ 208 (229)
T 2ywm_A 167 --YITSKVIDASENQDLAEQFQVVGVPKIVI--NKGVAEFVGAQPE 208 (229)
T ss_dssp --TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGGTEEEESCCCH
T ss_pred --CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCEEEEeeCCCCH
Confidence 6888888 6788999999999999998 7886668998763
No 17
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.96 E-value=2.4e-28 Score=235.19 Aligned_cols=215 Identities=13% Similarity=0.224 Sum_probs=185.4
Q ss_pred ceeecCHHHHHHHHhcC---CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEE
Q psy160 88 EIEEVNRRMLDKLLEEN---EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 161 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~---~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~ 161 (346)
.|.+||+++|++.+.++ ++++|+||+|||++|+++.|.|+++++.+.+. +.++.+| ++.+|++|+|+++||++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Ptl~ 80 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTNTCNKYGVSGYPTLK 80 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHHHHHHTTCCEESEEE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 57899999999999887 89999999999999999999999999998664 7777776 88999999999999999
Q ss_pred EEecCC-cceecCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc
Q psy160 162 YFRHRF-PSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDI 240 (346)
Q Consensus 162 ~~~~g~-~~~y~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~ 240 (346)
+|++|+ ...|.|.++.+ .|.+|+.+...|......+.++++++++.++.++|.|+.++|.. ..+.|.++|..+++
T Consensus 81 ~~~~g~~~~~~~G~~~~~-~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~---~~~~f~~~a~~~~~ 156 (481)
T 3f8u_A 81 IFRDGEEAGAYDGPRTAD-GIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSE---AHSEFLKAASNLRD 156 (481)
T ss_dssp EEETTEEEEECCSCSSHH-HHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCH---HHHHHHHHHHHHTT
T ss_pred EEeCCceeeeecCccCHH-HHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccc---hHHHHHHHHHHhcc
Confidence 999996 67899998854 99999999998866666688999999999999999999988764 46889999999986
Q ss_pred CceEEEEEcChhhhhhCCCccccEEEEEe--------CCeEEEee-cCccccccchhhhhhhccCCCCCCcccCCCCCCc
Q psy160 241 YGIHMVKIQDPQLAKRYSIKTFPALVYFR--------NGNPLIFE-GENKILKGTYIGTYISTKAFSLIPFCFSEKHPGA 311 (346)
Q Consensus 241 ~~i~~~~i~~~~~~~~~~i~~~Pti~~~~--------~g~~~~y~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 311 (346)
++.|+.+.+.+++++|+++..| +++|+ ++.+..|. |..+.+ .+..|++....|++++++.++...+
T Consensus 157 -~~~F~~~~~~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~---~l~~fi~~~~~p~v~e~t~~n~~~~ 231 (481)
T 3f8u_A 157 -NYRFAHTNVESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSG---KIKKFIQENIFGICPHMTEDNKDLI 231 (481)
T ss_dssp -TSCEEEECCHHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHH---HHHHHHHHHTTTTSCEECTTTHHHH
T ss_pred -CceEEEECCHHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHH---HHHHHHHHhCCCCccccChhHHHHh
Confidence 7889999899999999998765 88888 45678898 555432 3889999999999999999985554
Q ss_pred c
Q psy160 312 F 312 (346)
Q Consensus 312 ~ 312 (346)
+
T Consensus 232 ~ 232 (481)
T 3f8u_A 232 Q 232 (481)
T ss_dssp T
T ss_pred c
Confidence 4
No 18
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.95 E-value=5.7e-28 Score=225.78 Aligned_cols=215 Identities=15% Similarity=0.225 Sum_probs=157.7
Q ss_pred CceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhcc-----CCCcEEEEeC---ChhhHHhhCCCCcc
Q psy160 87 NEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETD-----NMDITFVKMA---DPRYARKWGVTKLP 158 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~-----~~~i~~~~~~---~~~l~~~~~i~~~P 158 (346)
+.|..|+.++|++++.++++++|.||||||++|+++.|.|+++++.++ ..++.++.+| +..+|++|+|+++|
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 468899999999999999999999999999999999999999999984 2248888876 78999999999999
Q ss_pred eEEEEecCCcc--eecCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHh
Q psy160 159 AVVYFRHRFPS--IYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDD 236 (346)
Q Consensus 159 tl~~~~~g~~~--~y~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~ 236 (346)
|+++|++|+.. .|.|.++.+ .|.+|+.+...+.+....+.+++++ +..++.++|.|+++++.+ ..+.|.++|.
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~-~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~ 159 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVK-ALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVAN 159 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHH-HHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSH---HHHHHHHHHH
T ss_pred EEEEEeCCcEeeeeecCcchHH-HHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHH
Confidence 99999999854 599998854 9999999998875543334567877 677788999999988764 3678999999
Q ss_pred hcCcCceEEEEEcChhhhhhCCCccccEEEEEeCC---eEEEeecCccccccchhhhhhhccCCCCCCcccCCCCCCc
Q psy160 237 ECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRNG---NPLIFEGENKILKGTYIGTYISTKAFSLIPFCFSEKHPGA 311 (346)
Q Consensus 237 ~~~~~~i~~~~i~~~~~~~~~~i~~~Pti~~~~~g---~~~~y~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 311 (346)
.+++ ++.|+.+.+ ++++.++++++| +++.+.+ ....|.|.+.+ . ..+..|++....|++++++.++...+
T Consensus 160 ~~~~-~~~F~~~~~-~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~-~-~~l~~fi~~~~~p~v~elt~~~~~~~ 232 (382)
T 2r2j_A 160 ILHD-DCAFLSAFG-DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTN-F-DVTYNWIQDKCVPLVREITFENGEEL 232 (382)
T ss_dssp HHTT-TCEEEEEES-CC--------CE-EEEECSSSSSCCEECCSCTTC-H-HHHHHHHHHHHSCSSEECCHHHHHHH
T ss_pred Hhhc-cceEEEEeh-hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCC-H-HHHHHHHHhcccCceEecChhhHHHH
Confidence 9986 677777644 678889999999 6555542 46889998732 1 22888999999999999998875433
No 19
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.95 E-value=3.5e-27 Score=218.89 Aligned_cols=187 Identities=14% Similarity=0.167 Sum_probs=151.4
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC-----ChHHHHhcCCCC--CCeEEEEeCC-ceeeec---CCCCC
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS-----DTEAAAKYNIIN--LPSLVYFRKQ-VPLLYD---GDLFD 69 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-----~~~~c~~~~i~~--~Ptl~~f~~~-~~~~y~---G~~~~ 69 (346)
|+||++||++|+++.|.|+++|+.++.. +.|+.+| +..+|+.|||++ +|++++|..+ ....|. |.++.
T Consensus 140 v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~ 218 (361)
T 3uem_A 140 LLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTA 218 (361)
T ss_dssp EEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCH
T ss_pred EEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCH
Confidence 5799999999999999999999998432 6666554 568999999998 9999999974 445675 55555
Q ss_pred HHHHHHHHhccCC----c--------c--ccCceeecCHHHHHHHHh-cCCcEEEEEECCCChhHHHHHHHHHHHHhhcc
Q psy160 70 EEKILTWLTSQDV----F--------E--IKNEIEEVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETD 134 (346)
Q Consensus 70 ~~~i~~~i~~~~~----p--------~--~~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~ 134 (346)
++|.+|+.+... | . ..+.+..++.++|++++. ++++++|.||||||++|+++.|.|+++++.++
T Consensus 219 -~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~ 297 (361)
T 3uem_A 219 -ERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYK 297 (361)
T ss_dssp -HHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhc
Confidence 689999976321 1 0 234688999999999884 67899999999999999999999999999985
Q ss_pred CC-CcEEEEeC-ChhhHHhhCCCCcceEEEEecC--C-cceecCCcchhHHHHHHHhhccc
Q psy160 135 NM-DITFVKMA-DPRYARKWGVTKLPAVVYFRHR--F-PSIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 135 ~~-~i~~~~~~-~~~l~~~~~i~~~Ptl~~~~~g--~-~~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
+. ++.++.+| ....+.+|+|.++||+++|.+| + +..|.|.++.+ +|.+|+.++..
T Consensus 298 ~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~-~l~~~l~~~~~ 357 (361)
T 3uem_A 298 DHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLD-GFKKFLESGGQ 357 (361)
T ss_dssp TCSSEEEEEEETTTCBCSSCCCCSSSEEEEECSSSSCCCEECCSCSSHH-HHHHHHTTTSC
T ss_pred cCCcEEEEEEECCccchhhcCCcccCeEEEEECCCCcceeEecCCCCHH-HHHHHHHhcCC
Confidence 43 58888887 3334889999999999999765 3 67899998844 99999998754
No 20
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-25 Score=201.51 Aligned_cols=214 Identities=15% Similarity=0.184 Sum_probs=167.6
Q ss_pred ccCceeecCHHHHHHHHh-cCCcEEEEEECCCChhHHHHHHHHHHHHhhccC-CCcEEEEeC---ChhhHHhhCCCCcce
Q psy160 85 IKNEIEEVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFVKMA---DPRYARKWGVTKLPA 159 (346)
Q Consensus 85 ~~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~-~~i~~~~~~---~~~l~~~~~i~~~Pt 159 (346)
....|.+||.++|++++. .+++++|+|||+||++|+.+.|.|+++++.+.+ ..+..+.+| +..+|++|+|.++||
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt 94 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPT 94 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSE
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccce
Confidence 345899999999999995 567899999999999999999999999999854 334445555 678999999999999
Q ss_pred EEEEecCC------------------cceecCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHhc-cceEEEEEEcCC
Q psy160 160 VVYFRHRF------------------PSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEE-TQYLAVYFYKLN 220 (346)
Q Consensus 160 l~~~~~g~------------------~~~y~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~-~~~~lv~F~~~~ 220 (346)
+++|++|+ +..|.|.++.+ .|++|+.+...+.+....+.++++++++. +++.++.| ...
T Consensus 95 ~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~-~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~f-s~~ 172 (298)
T 3ed3_A 95 LMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLA-PIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLF-SKQ 172 (298)
T ss_dssp EEEEECCCC-------------CCCEEEECCSCCSHH-HHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEE-ESS
T ss_pred EEEEECCceeecccccccccccccccceeecCCcCHH-HHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEE-cCC
Confidence 99999886 56799999855 99999999987755544467889998876 46666666 332
Q ss_pred ChhhHHHHHHHHHHHhhcCcCceEEEEEcChhhhhhC-----C-----C-------------ccccEEEEEeC--CeEEE
Q psy160 221 CNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRY-----S-----I-------------KTFPALVYFRN--GNPLI 275 (346)
Q Consensus 221 c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~-----~-----i-------------~~~Pti~~~~~--g~~~~ 275 (346)
. ...+.|.++|..+.+ .+.|+.+.+.+++..+ + | ...|+|++|+. ++++.
T Consensus 173 ~----~~~~~f~~~A~~~~~-~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~ 247 (298)
T 3ed3_A 173 D----KISPVYKSIALDWLG-KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWE 247 (298)
T ss_dssp S----SCCHHHHHHHHHTBT-TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEE
T ss_pred C----cchHHHHHHHHHhhc-CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEE
Confidence 2 235789999999987 8999999666665433 2 2 57899999985 67999
Q ss_pred eecCccccccchhhhhhh--ccCCCCCCcccCCC
Q psy160 276 FEGENKILKGTYIGTYIS--TKAFSLIPFCFSEK 307 (346)
Q Consensus 276 y~g~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~ 307 (346)
|.|...+ . ..+..|+. ....|.+++++..+
T Consensus 248 y~g~~~~-~-~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 248 YEGNSIN-K-NDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp CCCSSCC-H-HHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred eccccCC-H-HHHHHHHHhhcCCCCCcCCCchHH
Confidence 9974321 2 22777777 77789998888764
No 21
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.93 E-value=5.9e-25 Score=192.48 Aligned_cols=182 Identities=13% Similarity=0.223 Sum_probs=140.7
Q ss_pred CeecCCC--ChhhHHHHHHHHHHHhhhcc-cC---CeEEEcC---ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHH
Q psy160 1 MYINDEN--CPECDDILEELEHIDGDADQ-YG---IDMVKIS---DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEE 71 (346)
Q Consensus 1 v~Fy~~~--C~~c~~~~~~~~~~a~~~~~-~~---i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~ 71 (346)
|.||++| |++|+.+.+.++++|+..+. .| |.++.+| ++++|.+|+|+++||+++| +| ...|.|.... +
T Consensus 30 v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~-~g-~~~~~G~~~~-~ 106 (243)
T 2hls_A 30 VHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL-GG-EVRWTGIPAG-E 106 (243)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-TT-TEEEESCCCT-T
T ss_pred EEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-CC-ceeEcCCCcH-H
Confidence 5789999 99999999999999987533 11 6666654 6889999999999999999 66 7789897665 3
Q ss_pred HHHHHHhccCCccccCceeecCHHHHHHHHhc-CCcEEEEEECCCChhHHHHHHHHHHHHhhcc---CCCcEEEEeC---
Q psy160 72 KILTWLTSQDVFEIKNEIEEVNRRMLDKLLEE-NEFVTVFFYETDHKDSVKVLERLEKIDGETD---NMDITFVKMA--- 144 (346)
Q Consensus 72 ~i~~~i~~~~~p~~~~~v~~l~~~~~~~~~~~-~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~---~~~i~~~~~~--- 144 (346)
.+.+|+...... ...-..++++.++.+..- ++.+++.||+|||++|+++.|.|++++..+. ..++.++.+|
T Consensus 107 ~l~~fv~~~l~~--~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~ 184 (243)
T 2hls_A 107 EIRALVEVIMRL--SEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE 184 (243)
T ss_dssp HHHHHHHHHHHH--HTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT
T ss_pred HHHHHHHHHHhc--cCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc
Confidence 777776543221 112234667777766543 4667899999999999999999999999872 1357777765
Q ss_pred ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHHHhhcccc
Q psy160 145 DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 145 ~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
++.++++|+|.++||+++ +|+. .|.|.++.+ +|.+++.+...+
T Consensus 185 ~~~~~~~~~V~~vPt~~i--~G~~-~~~G~~~~~-~l~~~l~~~~~~ 227 (243)
T 2hls_A 185 NPDIADKYGVMSVPSIAI--NGYL-VFVGVPYEE-DFLDYVKSAAEG 227 (243)
T ss_dssp CHHHHHHTTCCSSSEEEE--TTEE-EEESCCCHH-HHHHHHHHHHTT
T ss_pred CHHHHHHcCCeeeCeEEE--CCEE-EEeCCCCHH-HHHHHHHHHhhc
Confidence 678999999999999988 7764 499998844 899999887654
No 22
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.92 E-value=2.6e-25 Score=215.18 Aligned_cols=214 Identities=9% Similarity=0.177 Sum_probs=174.4
Q ss_pred ccCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEE
Q psy160 85 IKNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 161 (346)
Q Consensus 85 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~ 161 (346)
..+.|.+|++++|++++.++++++|.||+|||+||+++.|.|+++++.+.+.++.++.+| ++.+|++|+|+++||++
T Consensus 12 ~~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 91 (504)
T 2b5e_A 12 EDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLK 91 (504)
T ss_dssp TTSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 455899999999999999899999999999999999999999999999966568888876 78999999999999999
Q ss_pred EEecCC---cceecCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHhccc--eEEEEEEcCCChhhHHHHHHHHHHHh
Q psy160 162 YFRHRF---PSIYRGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQ--YLAVYFYKLNCNICDQILEGLEKVDD 236 (346)
Q Consensus 162 ~~~~g~---~~~y~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~--~~lv~F~~~~c~~c~~~~~~~~~la~ 236 (346)
+|++|+ ...|.|.++.+ .|.+|+.+...+ .+..++. ++++++.++ ..+|.|+.+..+ ...+.|.++|.
T Consensus 92 ~~~~g~~~~~~~~~G~~~~~-~l~~~l~~~~~~-~v~~i~~--~~~~~~~~~~~~~~v~~f~~~~~---~~~~~f~~~A~ 164 (504)
T 2b5e_A 92 IFKNSDVNNSIDYEGPRTAE-AIVQFMIKQSQP-AVAVVAD--LPAYLANETFVTPVIVQSGKIDA---DFNATFYSMAN 164 (504)
T ss_dssp EEETTCTTCEEECCSCCSHH-HHHHHHHHHTSC-SEEECSC--HHHHHHHSCCSSCEEEEEESCCH---HHHHHHHHHHH
T ss_pred EEeCCccccceeecCCCCHH-HHHHHHHHhcCC-cceeHHH--HHHHHhcCCCceEEEEEeCCCCc---hHHHHHHHHHH
Confidence 999988 66799998855 999999999877 4556666 888887777 677777776543 55789999999
Q ss_pred hcCcCceEEEEEcChhhhhhCCCccccEEEEEeC-CeEEEeecC-ccccccchhhhhhhccCCCCCCcccCCCCCCcc
Q psy160 237 ECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFRN-GNPLIFEGE-NKILKGTYIGTYISTKAFSLIPFCFSEKHPGAF 312 (346)
Q Consensus 237 ~~~~~~i~~~~i~~~~~~~~~~i~~~Pti~~~~~-g~~~~y~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 312 (346)
.+++ ++.|+.+. ++++++++. +++|+. +.++.|.|. ........+..|++....|++++++.++...++
T Consensus 165 ~~~~-~~~F~~~~--~~~~~~~~~----i~l~~~~~~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~ 235 (504)
T 2b5e_A 165 KHFN-DYDFVSAE--NADDDFKLS----IYLPSAMDEPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYV 235 (504)
T ss_dssp HTTT-TCEEEEEE--CTTSCCEEE----EEETTEEEEEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHH
T ss_pred Hhhc-CcEEEEEH--HHHHhcCCe----EEecCCCCcccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHh
Confidence 9986 78888776 677888765 777764 367789887 410011228889999999999999988755443
No 23
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.92 E-value=7.6e-24 Score=185.41 Aligned_cols=183 Identities=16% Similarity=0.202 Sum_probs=142.0
Q ss_pred HHHHHHHHhc-CCcEEEEEECCC--ChhHHHHHHHHHHHHhhccC--CC--cEEEEeC---ChhhHHhhCCCCcceEEEE
Q psy160 94 RRMLDKLLEE-NEFVTVFFYETD--HKDSVKVLERLEKIDGETDN--MD--ITFVKMA---DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 94 ~~~~~~~~~~-~~~~lv~F~~~~--C~~c~~~~~~~~~~a~~~~~--~~--i~~~~~~---~~~l~~~~~i~~~Ptl~~~ 163 (346)
.+.+.++++. .++++|.||++| |++|+.+.+.++++|+...+ -+ +.|+.+| ++++|++|||+++||+++|
T Consensus 14 ~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~ 93 (243)
T 2hls_A 14 RRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL 93 (243)
T ss_dssp HHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE
Confidence 4566666654 368999999999 99999999999999987422 11 6777665 7889999999999999999
Q ss_pred ecCCcceecCCcchhHHHHHHHhhccc-cCcEEEccHHHHHHHHh-ccceEEEEEEcCCChhhHHHHHHHHHHHhhcC--
Q psy160 164 RHRFPSIYRGDLSEEEEVLQWLITQKT-EDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECD-- 239 (346)
Q Consensus 164 ~~g~~~~y~g~~~~~~~i~~fi~~~~~-~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~-- 239 (346)
+| ...|.|..... ++..|+..... ......++.+.++.+.+ .++.+++.||+|||++|+.+.|.|.+++..+.
T Consensus 94 -~g-~~~~~G~~~~~-~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~ 170 (243)
T 2hls_A 94 -GG-EVRWTGIPAGE-EIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ 170 (243)
T ss_dssp -TT-TEEEESCCCTT-HHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT
T ss_pred -CC-ceeEcCCCcHH-HHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc
Confidence 67 77898877644 77777766432 11112456666666544 35577889999999999999999999999882
Q ss_pred c-CceEEEEE---cChhhhhhCCCccccEEEEEeCCeEEEeecCccc
Q psy160 240 I-YGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENKI 282 (346)
Q Consensus 240 ~-~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~~~y~g~~~~ 282 (346)
+ .++.+..+ .+++++++|+|+++||+++ +|+. .|.|.++.
T Consensus 171 ~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~-~~~G~~~~ 214 (243)
T 2hls_A 171 GNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYL-VFVGVPYE 214 (243)
T ss_dssp TCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEE-EEESCCCH
T ss_pred cCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEE-EEeCCCCH
Confidence 1 26888888 5788999999999999988 8875 49998863
No 24
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.4e-23 Score=184.06 Aligned_cols=195 Identities=15% Similarity=0.223 Sum_probs=148.8
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcc-cCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCc-----------------
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQ-YGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQV----------------- 59 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~-~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~----------------- 59 (346)
|+|||+||++|+++.|.|+++++.+.. ..+..+.++ +.++|.+|+|+++||+++|++|.
T Consensus 40 V~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~ 119 (298)
T 3ed3_A 40 VEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAH 119 (298)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC-------------CCC
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeecccccccccccccc
Confidence 689999999999999999999999843 445556665 67999999999999999999875
Q ss_pred -eeeecCCCCCHHHHHHHHhccCCccccCceeecC-HHHHHHHHhcC-CcEEEEEECCCChhHHHHHHHHHHHHhhccCC
Q psy160 60 -PLLYDGDLFDEEKILTWLTSQDVFEIKNEIEEVN-RRMLDKLLEEN-EFVTVFFYETDHKDSVKVLERLEKIDGETDNM 136 (346)
Q Consensus 60 -~~~y~G~~~~~~~i~~~i~~~~~p~~~~~v~~l~-~~~~~~~~~~~-~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~ 136 (346)
+..|.|.++. ++|++|+.+...+ .+..++ .+++++++..+ .+.+++|.. .. ...+.|..+|..+.+
T Consensus 120 ~~~~y~G~r~~-~~i~~fl~~~~~~----~v~~i~~~~~l~~~l~~~~~~~vi~fs~-~~----~~~~~f~~~A~~~~~- 188 (298)
T 3ed3_A 120 ANEVYSGARTL-APIVDFSLSRIRS----YVKKFVRIDTLGSLLRKSPKLSVVLFSK-QD----KISPVYKSIALDWLG- 188 (298)
T ss_dssp EEEECCSCCSH-HHHHHHHHTTCCC----CEEECSCGGGHHHHHTSCSSEEEEEEES-SS----SCCHHHHHHHHHTBT-
T ss_pred cceeecCCcCH-HHHHHHHHHhccc----ccEEcCCHHHHHHHHhcCCceEEEEEcC-CC----cchHHHHHHHHHhhc-
Confidence 6789999877 5999999999887 888885 68899999875 556666643 22 234689999998865
Q ss_pred CcEEEEeCChhhHHhh-----C-----C-------------CCcceEEEEec--CCcceecCCcchhHHHHHHHhh--cc
Q psy160 137 DITFVKMADPRYARKW-----G-----V-------------TKLPAVVYFRH--RFPSIYRGDLSEEEEVLQWLIT--QK 189 (346)
Q Consensus 137 ~i~~~~~~~~~l~~~~-----~-----i-------------~~~Ptl~~~~~--g~~~~y~g~~~~~~~i~~fi~~--~~ 189 (346)
.+.|+.++..+++..+ + | ...|+|++|+. ++++.|+|...+.++|.+||.+ ..
T Consensus 189 ~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~~ 268 (298)
T 3ed3_A 189 KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRDTFSI 268 (298)
T ss_dssp TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHHHHTC
T ss_pred CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHhhcCC
Confidence 3889988766666433 2 2 67999999985 4588899754346699999994 44
Q ss_pred ccCcEEEccH-HHHHHHHh
Q psy160 190 TEDRIELITR-VMLETMVE 207 (346)
Q Consensus 190 ~~~~v~~l~~-~~~~~~~~ 207 (346)
.| .+..++. +.|.+.++
T Consensus 269 ~p-~~~~ls~~~~~~~~~~ 286 (298)
T 3ed3_A 269 TP-NEGPFSRRSEYIAYLK 286 (298)
T ss_dssp CC-SSSTTSHHHHHHHHHH
T ss_pred CC-CcCCCchHHHHHHHHh
Confidence 44 4456665 44444433
No 25
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.87 E-value=7.1e-21 Score=166.77 Aligned_cols=198 Identities=11% Similarity=0.194 Sum_probs=142.9
Q ss_pred cCceeecCHHHHHHHHhc-CCcEEEEEECCCChhHHHHHHHHHHHHhhccC--CCcEEEEeC-----ChhhHHhhCCCCc
Q psy160 86 KNEIEEVNRRMLDKLLEE-NEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA-----DPRYARKWGVTKL 157 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~-~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~--~~i~~~~~~-----~~~l~~~~~i~~~ 157 (346)
.+.|.+++.++|++.+.+ +++++|.||++||++|+++.|.|+++++.+.+ .++.++.+| +.++|++|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 458999999999997754 48999999999999999999999999999854 347777665 5789999999999
Q ss_pred ceEEEEecCC------cceecCCcchhHHHHHHHhhcccc---------CcEEEccHHHHHHHHh--ccceEEEEEEcCC
Q psy160 158 PAVVYFRHRF------PSIYRGDLSEEEEVLQWLITQKTE---------DRIELITRVMLETMVE--ETQYLAVYFYKLN 220 (346)
Q Consensus 158 Ptl~~~~~g~------~~~y~g~~~~~~~i~~fi~~~~~~---------~~v~~l~~~~~~~~~~--~~~~~lv~F~~~~ 220 (346)
||+++|.+|. ...+.| .+ .+.|.+++.+.... +.+..++.+++++++. ..++..+.|....
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~-~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~ 168 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-AD-VQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGG 168 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CC-HHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CC-HHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECC
Confidence 9999999743 335666 44 44788888775432 1234556788888764 3456777777765
Q ss_pred ChhhHHHHHHHHHHHhhcCc-CceEEEEE--cChhhhhhCCCccccEEEEEe-CCeEEEeecCccccccchhhhhhhc
Q psy160 221 CNICDQILEGLEKVDDECDI-YGIHMVKI--QDPQLAKRYSIKTFPALVYFR-NGNPLIFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 221 c~~c~~~~~~~~~la~~~~~-~~i~~~~i--~~~~~~~~~~i~~~Pti~~~~-~g~~~~y~g~~~~~~~~~~~~~i~~ 294 (346)
|.. ..+++..+.. ..+.+..+ .+..++++|+|+++|+++++. +|+...++.... ....+..++++
T Consensus 169 ~~~-------~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~~~~~--~r~~~~~~l~~ 237 (244)
T 3q6o_A 169 SYL-------AREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLME--SRSFYTAYLQR 237 (244)
T ss_dssp CCH-------HHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSS--SHHHHHHHHHT
T ss_pred cch-------HHHHHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCCeEeeccccc--cHHHHHHHHHh
Confidence 432 2333333332 25777777 458999999999999998775 677777765443 33335555543
No 26
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.83 E-value=8.6e-19 Score=151.77 Aligned_cols=196 Identities=9% Similarity=0.130 Sum_probs=156.2
Q ss_pred cCceeec-CHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCCCcceEEEEe
Q psy160 86 KNEIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 86 ~~~v~~l-~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~~~Ptl~~~~ 164 (346)
++.+.+| +.+++++++.+++.++|.|+++||. .+.++|.++|+.++ ++.|+.+.++++|+++++++ |+|++|+
T Consensus 8 ~~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~---~~~~~f~~~A~~l~--~~~F~~t~~~~v~~~~~v~~-p~i~lfk 81 (227)
T 4f9z_D 8 AQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEI---PAVPILHSMVQKFP--GVSFGISTDSEVLTHYNITG-NTICLFR 81 (227)
T ss_dssp -CCCEECCSHHHHHHHHHTSSEEEEEECSCSCS---THHHHHHHHTTTCT--TSEEEEECCHHHHHHTTCCS-SEEEEEE
T ss_pred cCCCeeeCCHHHHHHHHhcCCeEEEEEecCCCc---hhHHHHHHHHHhCC--CceEEEECCHHHHHHcCCCC-CeEEEEE
Confidence 3345555 6799999999999999999999864 78899999999984 59999999999999999998 9999999
Q ss_pred cCC--cceecC----CcchhHHHHHHHhhccccCcEEEccHHHHHHHHhccceE-EEEEEcCCChhhHHHHHHHHHHHhh
Q psy160 165 HRF--PSIYRG----DLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYL-AVYFYKLNCNICDQILEGLEKVDDE 237 (346)
Q Consensus 165 ~g~--~~~y~g----~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~~~-lv~F~~~~c~~c~~~~~~~~~la~~ 237 (346)
++. +..|+| .++ .++|.+|+..+..| .+..++.+++.++..+..+. ++.|..+||++|..+.+.|+++|+.
T Consensus 82 ~~~~~~~~~~~~~~g~~~-~~~l~~fi~~~~~p-lv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~ 159 (227)
T 4f9z_D 82 LVDNEQLNLEDEDIESID-ATKLSRFIEINSLH-MVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKL 159 (227)
T ss_dssp TTTTEEEEECHHHHHTCC-HHHHHHHHHHHCCC-SEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHH
T ss_pred ecCcccccccccccCCCC-HHHHHHHHHHhCCC-ceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHH
Confidence 743 567885 676 44999999999887 77799999999988776444 4557788999999999999999999
Q ss_pred cCcCceEEEEEc-----ChhhhhhCCCc--cccEEEEEeCCe--EEEee-cCccccccchhhhhhh
Q psy160 238 CDIYGIHMVKIQ-----DPQLAKRYSIK--TFPALVYFRNGN--PLIFE-GENKILKGTYIGTYIS 293 (346)
Q Consensus 238 ~~~~~i~~~~i~-----~~~~~~~~~i~--~~Pti~~~~~g~--~~~y~-g~~~~~~~~~~~~~i~ 293 (346)
+++ ++.|+.++ ...+++.||+. ++|+++++..++ ...+. +..+.+ .|..|++
T Consensus 160 ~k~-~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~---~i~~Fv~ 221 (227)
T 4f9z_D 160 FQG-KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVE---HVQNFCD 221 (227)
T ss_dssp TTT-TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHH---HHHHHHH
T ss_pred hhC-CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHH---HHHHHHH
Confidence 997 78899882 34578999998 899999997433 23332 444322 2656654
No 27
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.81 E-value=6.3e-19 Score=169.62 Aligned_cols=185 Identities=10% Similarity=0.197 Sum_probs=137.9
Q ss_pred cCceeecCHHHHHHHHh-cCCcEEEEEECCCChhHHHHHHHHHHHHhhccC--CCcEEEEeC-----ChhhHHhhCCCCc
Q psy160 86 KNEIEEVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA-----DPRYARKWGVTKL 157 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~--~~i~~~~~~-----~~~l~~~~~i~~~ 157 (346)
.+.|.+++.++|++.+. ++++++|.|||+||++|+.+.|.|+++++.+.+ .++.++.+| +.++|++|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 45799999999999774 458999999999999999999999999999854 347777765 5789999999999
Q ss_pred ceEEEEecCC----c-ceecCCcchhHHHHHHHhhcccc---------CcEEEccHHHHHHHHhc--cceEEEEEEcCCC
Q psy160 158 PAVVYFRHRF----P-SIYRGDLSEEEEVLQWLITQKTE---------DRIELITRVMLETMVEE--TQYLAVYFYKLNC 221 (346)
Q Consensus 158 Ptl~~~~~g~----~-~~y~g~~~~~~~i~~fi~~~~~~---------~~v~~l~~~~~~~~~~~--~~~~lv~F~~~~c 221 (346)
||+++|.+|. . ..+.|..+ .+.|.+++.+.... +.+..++.+++++++.. .+++++.|.....
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~-~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s 169 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGAN-VQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDS 169 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCC-HHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTC
T ss_pred CEEEEEcCcccCCCceeEecCCCC-HHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCch
Confidence 9999999543 2 34666666 44888888775432 12455677888887653 4577777876542
Q ss_pred hhhHHHHHHHHHHHhhcCc-CceEEEEE--cChhhhhhCCCccccEEEEEe-CCeEEEeec
Q psy160 222 NICDQILEGLEKVDDECDI-YGIHMVKI--QDPQLAKRYSIKTFPALVYFR-NGNPLIFEG 278 (346)
Q Consensus 222 ~~c~~~~~~~~~la~~~~~-~~i~~~~i--~~~~~~~~~~i~~~Pti~~~~-~g~~~~y~g 278 (346)
....+++..+.. ..+.+..+ .+.+++++|||+++|+++++. +|+...+..
T Consensus 170 -------~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v 223 (519)
T 3t58_A 170 -------YLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVSRVPV 223 (519)
T ss_dssp -------CHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCC
T ss_pred -------HHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCceeeccc
Confidence 234455555542 24777666 457999999999999999996 555555543
No 28
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.81 E-value=1.3e-18 Score=150.61 Aligned_cols=175 Identities=14% Similarity=0.158 Sum_probs=145.3
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcCChHHHHhcCCCCCCeEEEEeCC--ceeeecC----CCCCHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKISDTEAAAKYNIINLPSLVYFRKQ--VPLLYDG----DLFDEEKIL 74 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~~c~~~~i~~~Ptl~~f~~~--~~~~y~G----~~~~~~~i~ 74 (346)
|-||++|| +.+.++|.++|+.++ .+.|+.+.+.++|.+|++++ |+|++|++. .+..|.| .++. ++|.
T Consensus 32 Vgff~~~~---~~~~~~f~~~A~~l~--~~~F~~t~~~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~~g~~~~-~~l~ 104 (227)
T 4f9z_D 32 IGFFQDLE---IPAVPILHSMVQKFP--GVSFGISTDSEVLTHYNITG-NTICLFRLVDNEQLNLEDEDIESIDA-TKLS 104 (227)
T ss_dssp EEECSCSC---STHHHHHHHHTTTCT--TSEEEEECCHHHHHHTTCCS-SEEEEEETTTTEEEEECHHHHHTCCH-HHHH
T ss_pred EEEecCCC---chhHHHHHHHHHhCC--CceEEEECCHHHHHHcCCCC-CeEEEEEecCcccccccccccCCCCH-HHHH
Confidence 46899986 588999999999994 79999999999999999998 999999974 5678885 5655 6999
Q ss_pred HHHhccCCccccCceeecCHHHHHHHHhcCCc-EEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-----Chhh
Q psy160 75 TWLTSQDVFEIKNEIEEVNRRMLDKLLEENEF-VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-----DPRY 148 (346)
Q Consensus 75 ~~i~~~~~p~~~~~v~~l~~~~~~~~~~~~~~-~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-----~~~l 148 (346)
+|+..+..| .|.++|.+|+.+++.++.+ ++++|+.+||++|.++.+.|+++|+.+++. +.|+.+| +..+
T Consensus 105 ~fi~~~~~p----lv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~~~~~ 179 (227)
T 4f9z_D 105 RFIEINSLH----MVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKENGKV 179 (227)
T ss_dssp HHHHHHCCC----SEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGGGHHH
T ss_pred HHHHHhCCC----ceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHhHHHH
Confidence 999999999 9999999999999887744 456678999999999999999999998664 7777665 3468
Q ss_pred HHhhCCC--CcceEEEEecCCc--ceec-CCcchhHHHHHHHhhc
Q psy160 149 ARKWGVT--KLPAVVYFRHRFP--SIYR-GDLSEEEEVLQWLITQ 188 (346)
Q Consensus 149 ~~~~~i~--~~Ptl~~~~~g~~--~~y~-g~~~~~~~i~~fi~~~ 188 (346)
++.||+. .+|++.++..+.. +.+. +..+ .++|.+|+++.
T Consensus 180 l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t-~~~i~~Fv~~~ 223 (227)
T 4f9z_D 180 ISFFKLKESQLPALAIYQTLDDEWDTLPTAEVS-VEHVQNFCDGF 223 (227)
T ss_dssp HHHTTCCGGGCSEEEEEESSSCCEEEETTCCCC-HHHHHHHHHHH
T ss_pred HHHcCCCcccCCEEEEEECCCCccccCCcCCCC-HHHHHHHHHHH
Confidence 8999998 8999999985432 3443 6676 45899998764
No 29
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.79 E-value=3.9e-18 Score=149.25 Aligned_cols=179 Identities=13% Similarity=0.196 Sum_probs=122.9
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcc--cCCeEEEcC-----ChHHHHhcCCCCCCeEEEEeCC------ceeeecCCC
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQ--YGIDMVKIS-----DTEAAAKYNIINLPSLVYFRKQ------VPLLYDGDL 67 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~--~~i~~~~~~-----~~~~c~~~~i~~~Ptl~~f~~~------~~~~y~G~~ 67 (346)
|+|||+||++|+++.|.|+++++.+.. .++.++.++ +.++|.+|+|+++||+++|++| ....+.| .
T Consensus 35 v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~ 113 (244)
T 3q6o_A 35 VEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG-A 113 (244)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT-C
T ss_pred EEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC-C
Confidence 689999999999999999999999854 356665553 5789999999999999999973 3344555 4
Q ss_pred CCHHHHHHHHhccCC------ccccCceeecCHHHHHHHHhcC--CcEEEEEECCCChhHHHHHHHHHHHHhhc-cCCCc
Q psy160 68 FDEEKILTWLTSQDV------FEIKNEIEEVNRRMLDKLLEEN--EFVTVFFYETDHKDSVKVLERLEKIDGET-DNMDI 138 (346)
Q Consensus 68 ~~~~~i~~~i~~~~~------p~~~~~v~~l~~~~~~~~~~~~--~~~lv~F~~~~C~~c~~~~~~~~~~a~~~-~~~~i 138 (346)
..+.+.+++.+... |.....+..++.++++.++..+ +...+.|....|.... +++..+ ....+
T Consensus 114 -~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~~~~~-------~~~~d~~~~~~i 185 (244)
T 3q6o_A 114 -DVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGGSYLAR-------EVALDLSQHKGV 185 (244)
T ss_dssp -CHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTTCCHHH-------HHHHHTTTCTTE
T ss_pred -CHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECCcchHH-------HHHHHhccCCce
Confidence 33577777754321 1111234566788888887544 5566777776654333 233333 22346
Q ss_pred EEEEeC--ChhhHHhhCCCCcceEEEEe-cCCcceecCCcchhHHHHHHHhhc
Q psy160 139 TFVKMA--DPRYARKWGVTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 139 ~~~~~~--~~~l~~~~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~~i~~fi~~~ 188 (346)
.+..++ +..++++|||+++||+++|. +|+...+.........+..++++.
T Consensus 186 ~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 186 AVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp EEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred EEEEEeCchHHHHHHcCCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 666555 48999999999999998887 566666765555443555555543
No 30
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.77 E-value=2.6e-18 Score=134.82 Aligned_cols=103 Identities=14% Similarity=0.240 Sum_probs=88.7
Q ss_pred ccCceeecCHHHHHHHHh-cCCcEEEEEECCCChhHHHHHHHHHHHHhhcc----CCCcEEEEeC---ChhhHHhhCCCC
Q psy160 85 IKNEIEEVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETD----NMDITFVKMA---DPRYARKWGVTK 156 (346)
Q Consensus 85 ~~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~----~~~i~~~~~~---~~~l~~~~~i~~ 156 (346)
.+..|.+|+.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. ..++.++.+| ++++|++|+|++
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 345899999999999985 57899999999999999999999999998762 2348888876 779999999999
Q ss_pred cceEEEEecCCc---ceecCCcchhHHHHHHHhhc
Q psy160 157 LPAVVYFRHRFP---SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 157 ~Ptl~~~~~g~~---~~y~g~~~~~~~i~~fi~~~ 188 (346)
+||+++|++|.. ..|.|.++.+ +|.+|+.+.
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~-~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLS-LVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHH-HHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHH-HHHHHHHhc
Confidence 999999998763 6899998854 999999864
No 31
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.75 E-value=1.2e-17 Score=126.41 Aligned_cols=95 Identities=18% Similarity=0.320 Sum_probs=79.3
Q ss_pred eec-CHHHHHHHHhc--CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEE
Q psy160 90 EEV-NRRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 90 ~~l-~~~~~~~~~~~--~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~ 163 (346)
.++ +.++|++.+.+ +++++|.|||+||++|+.+.|.|+++++.+.+ +.++.+| +++++++|+|+++||+++|
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDECEDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTCHHHHHHTTCCBSSEEEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccCHHHHHHcCCCeecEEEEE
Confidence 345 56899998865 47899999999999999999999999998754 6677665 7899999999999999999
Q ss_pred ecCCcc-eecCCcchhHHHHHHHhhc
Q psy160 164 RHRFPS-IYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 164 ~~g~~~-~y~g~~~~~~~i~~fi~~~ 188 (346)
++|+.. ++.|. + .++|.+|++++
T Consensus 81 ~~G~~v~~~~G~-~-~~~l~~~i~k~ 104 (105)
T 3zzx_A 81 KNGQKLDSLSGA-N-YDKLLELVEKN 104 (105)
T ss_dssp ETTEEEEEEESC-C-HHHHHHHHHHH
T ss_pred ECCEEEEEEeCc-C-HHHHHHHHHhc
Confidence 999844 57784 4 44899999875
No 32
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.74 E-value=1.4e-17 Score=126.08 Aligned_cols=93 Identities=17% Similarity=0.391 Sum_probs=76.0
Q ss_pred EccHHHHHHHHhc--cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeC
Q psy160 196 LITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 196 ~l~~~~~~~~~~~--~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~ 270 (346)
..+.++|++.+.+ +++++|.|||+||++|+.+.|.++++++.+. ++.|+++ .+++++++|+|+++||+++|++
T Consensus 5 i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~ 82 (105)
T 3zzx_A 5 VKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDECEDIAQDNQIACMPTFLFMKN 82 (105)
T ss_dssp CCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCCBSSEEEEEET
T ss_pred eCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEecccCHHHHHHcCCCeecEEEEEEC
Confidence 3467899997753 6799999999999999999999999999886 5788888 6889999999999999999999
Q ss_pred CeEEE-eecCccccccchhhhhhhc
Q psy160 271 GNPLI-FEGENKILKGTYIGTYIST 294 (346)
Q Consensus 271 g~~~~-y~g~~~~~~~~~~~~~i~~ 294 (346)
|+.+. +.| .+.+ . +..+++.
T Consensus 83 G~~v~~~~G-~~~~--~-l~~~i~k 103 (105)
T 3zzx_A 83 GQKLDSLSG-ANYD--K-LLELVEK 103 (105)
T ss_dssp TEEEEEEES-CCHH--H-HHHHHHH
T ss_pred CEEEEEEeC-cCHH--H-HHHHHHh
Confidence 98765 556 4322 2 5555543
No 33
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.72 E-value=5.8e-17 Score=123.51 Aligned_cols=101 Identities=12% Similarity=0.220 Sum_probs=87.0
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccC--CCcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~--~~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
++.+..+++++|++.+. +++++|+||++||++|+.+.|.|.++++.+.. .++.++.+| ++.++++|+|.++||+
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 35789999999999998 78999999999999999999999999998742 357777776 6789999999999999
Q ss_pred EEEecCC-cceecCCcchhHHHHHHHhhc
Q psy160 161 VYFRHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 161 ~~~~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
++|++|+ ...|.|..+.+ +|.+|+.++
T Consensus 83 ~~~~~g~~~~~~~g~~~~~-~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGKKVSEHSGGRDLD-SLHRFVLSQ 110 (111)
T ss_dssp EEEETTEEEEEECSCCSHH-HHHHHHHHH
T ss_pred EEEeCCcEEEeccCCcCHH-HHHHHHHhc
Confidence 9999888 45689988744 899999864
No 34
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.71 E-value=1.5e-16 Score=153.13 Aligned_cols=179 Identities=11% Similarity=0.163 Sum_probs=122.8
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcc--cCCeEEEcC-----ChHHHHhcCCCCCCeEEEEeCC----ce-eeecCCCC
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQ--YGIDMVKIS-----DTEAAAKYNIINLPSLVYFRKQ----VP-LLYDGDLF 68 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~--~~i~~~~~~-----~~~~c~~~~i~~~Ptl~~f~~~----~~-~~y~G~~~ 68 (346)
|+|||+||++|+++.|.|+++++.+.. .++.++.+| +.++|++|+|+++||+++|.+| .. ..+.|..+
T Consensus 35 V~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~ 114 (519)
T 3t58_A 35 VEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGAN 114 (519)
T ss_dssp EEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCC
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCCCC
Confidence 689999999999999999999999854 356666654 4799999999999999999963 22 34566655
Q ss_pred CHHHHHHHHhccCC------ccccCceeecCHHHHHHHHhcC--CcEEEEEECCCChhHHHHHHHHHHHHhhcc-CCCcE
Q psy160 69 DEEKILTWLTSQDV------FEIKNEIEEVNRRMLDKLLEEN--EFVTVFFYETDHKDSVKVLERLEKIDGETD-NMDIT 139 (346)
Q Consensus 69 ~~~~i~~~i~~~~~------p~~~~~v~~l~~~~~~~~~~~~--~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~-~~~i~ 139 (346)
. +.+.+++.+... |.....+..++.++++.++..+ ++.++.|...... ...+++..+. ..++.
T Consensus 115 ~-~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s~-------~~~~~~ldl~~~~~v~ 186 (519)
T 3t58_A 115 V-QTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDSY-------LGREVTLDLSQYHAVA 186 (519)
T ss_dssp H-HHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTCC-------HHHHHHHHTTTCTTEE
T ss_pred H-HHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCchH-------HHHHHHHHhhccCCee
Confidence 4 577777754322 1112246677889998888654 4567777765421 3344444442 22355
Q ss_pred EEEeC--ChhhHHhhCCCCcceEEEEec-CCcceecCCcchhHHHHHHHhh
Q psy160 140 FVKMA--DPRYARKWGVTKLPAVVYFRH-RFPSIYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 140 ~~~~~--~~~l~~~~~i~~~Ptl~~~~~-g~~~~y~g~~~~~~~i~~fi~~ 187 (346)
+..+. +..++++|||+.+|+++++.. |+...+.........+..++++
T Consensus 187 v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 187 VRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp EEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHHHTT
T ss_pred EEEecCchHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHHHHH
Confidence 55443 579999999999999999975 4444444333323356667665
No 35
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=4.4e-17 Score=129.84 Aligned_cols=105 Identities=18% Similarity=0.266 Sum_probs=92.7
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCC--CcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNM--DITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~--~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
.+.+..++.++|++.+.++++++|+||++||++|+++.|.|.++++.+.+. ++.++.+| +..++++|+|.++||+
T Consensus 16 ~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 95 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTI 95 (140)
T ss_dssp ETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEE
T ss_pred CCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeE
Confidence 457899999999999988899999999999999999999999999988543 48888887 6789999999999999
Q ss_pred EEEecCCcceecCCcchhHHHHHHHhhcccc
Q psy160 161 VYFRHRFPSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 161 ~~~~~g~~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
++|++|+...|.|.++.+ .|.+|+.+...+
T Consensus 96 ~~~~~G~~~~~~g~~~~~-~l~~~l~~~~~~ 125 (140)
T 2dj1_A 96 KILKKGQAVDYDGSRTQE-EIVAKVREVSQP 125 (140)
T ss_dssp EEEETTEEEECCSCCCHH-HHHHHHHHHHSS
T ss_pred EEEECCcEEEcCCCCCHH-HHHHHHHHhcCC
Confidence 999989877799988844 899999987654
No 36
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.71 E-value=1.5e-16 Score=121.28 Aligned_cols=100 Identities=18% Similarity=0.359 Sum_probs=86.8
Q ss_pred CceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
..+.+++.++|++.+ .++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+| ++.++++|+|.++||+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 82 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKTLFQRFSLKGVPQILY 82 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSCEEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChhHHHhcCCCcCCEEEE
Confidence 368899999999999 7789999999999999999999999999999864 37777665 778999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.|..+.+ ++.+|+.+.
T Consensus 83 ~~~g~~~~~~~g~~~~~-~l~~~l~~~ 108 (111)
T 3gnj_A 83 FKDGEYKGKMAGDVEDD-EVEQMIADV 108 (111)
T ss_dssp EETTEEEEEEESSCCHH-HHHHHHHHH
T ss_pred EECCEEEEEEeccCCHH-HHHHHHHHH
Confidence 998884 4688988744 899998765
No 37
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.70 E-value=1.3e-16 Score=120.95 Aligned_cols=101 Identities=13% Similarity=0.177 Sum_probs=87.8
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
.+.+..++.++|++.+.++++++|+||++||++|+.+.|.+.++++.+.+ ++.++.++ ++.++++|+|.++||+++
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 81 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLNIPTTLI 81 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCcccCCEEEE
Confidence 34788999999999999999999999999999999999999999999864 36666664 778999999999999999
Q ss_pred EecCC-cceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+ ...+.|..+.+ ++.+++.+.
T Consensus 82 ~~~g~~~~~~~g~~~~~-~l~~~l~~~ 107 (109)
T 3tco_A 82 FVNGQLVDSLVGAVDED-TLESTVNKY 107 (109)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHH
T ss_pred EcCCcEEEeeeccCCHH-HHHHHHHHH
Confidence 98887 45588988744 899998764
No 38
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=7.9e-17 Score=126.00 Aligned_cols=103 Identities=12% Similarity=0.244 Sum_probs=88.2
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
.+.+.+++.++|+++++. .++|+||++||++|+++.|.|.++++.+.+.++.++.+| +..++++|+|.++||+++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYH 83 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEE
Confidence 347899999999987754 399999999999999999999999998865457777765 778999999999999999
Q ss_pred EecCCcceecCCcchhHHHHHHHhhcccc
Q psy160 163 FRHRFPSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 163 ~~~g~~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
|++|+...|.|..+.+ +|.+|+.+...+
T Consensus 84 ~~~G~~~~~~G~~~~~-~l~~~l~~~~~~ 111 (126)
T 1x5e_A 84 CKDGEFRRYQGPRTKK-DFINFISDKEWK 111 (126)
T ss_dssp EETTEEEECCSCCCHH-HHHHHHHTCGGG
T ss_pred EeCCeEEEeecCCCHH-HHHHHHHHHhhc
Confidence 9999877899988744 899999887643
No 39
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.70 E-value=9.3e-17 Score=139.64 Aligned_cols=141 Identities=9% Similarity=0.120 Sum_probs=112.7
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEE--CCCChhHHHHHHHHHHHHhhccC--CCcEEEEeC--------ChhhHHhhC
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFY--ETDHKDSVKVLERLEKIDGETDN--MDITFVKMA--------DPRYARKWG 153 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~--~~~C~~c~~~~~~~~~~a~~~~~--~~i~~~~~~--------~~~l~~~~~ 153 (346)
+..+..+++++|++++.++++++|.|| ||||+ +.|.|+++|+.+.+ .++.|+.+| ++++|++|+
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 447889999999998888899999999 99999 99999999999843 357888765 478999999
Q ss_pred CC--CcceEEEEecCC---ccee--cCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHH
Q psy160 154 VT--KLPAVVYFRHRF---PSIY--RGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQ 226 (346)
Q Consensus 154 i~--~~Ptl~~~~~g~---~~~y--~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~ 226 (346)
|+ ++||+++|+ |+ +..| .|.++.+ +|.+|+.+......-..-.-..++.++.+ |.+.||..|..
T Consensus 91 V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~-~L~~fi~~~~~~~~~~~g~i~~~d~l~~~-------f~~~~~~~~~~ 161 (248)
T 2c0g_A 91 VDDKNFPSIFLFK-GNADEYVQLPSHVDVTLD-NLKAFVSANTPLYIGRDGCIKEFNEVLKN-------YANIPDAEQLK 161 (248)
T ss_dssp CCTTSCCEEEEES-SSSSSEEECCTTSCCCHH-HHHHHHHHHSSCCCCCTTCCHHHHHHHTT-------GGGSCHHHHHH
T ss_pred CCcCCCCeEEEEe-CCcCcceeecccCCCCHH-HHHHHHHHhhccccCCCCchHHHHHHHHH-------HhcccchhHHH
Confidence 99 999999999 87 4678 8998854 99999998864211111122556665443 67789999999
Q ss_pred HHHHHHHHHhhcC
Q psy160 227 ILEGLEKVDDECD 239 (346)
Q Consensus 227 ~~~~~~~la~~~~ 239 (346)
+.+.+++++..+.
T Consensus 162 ~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 162 LIEKLQAKQEQLT 174 (248)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcc
Confidence 9999999888774
No 40
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.69 E-value=9.2e-17 Score=123.02 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=87.9
Q ss_pred ceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEe
Q psy160 88 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 164 (346)
.+.+++.++|++.+ ++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+| ++.++++|+|.++||+++|+
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 79 (112)
T 2voc_A 2 AIVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79 (112)
T ss_dssp CCEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTCCSHHHHTTCCSBSEEEEEE
T ss_pred CeEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCCcccEEEEEe
Confidence 36789999999998 888999999999999999999999999998854 37777665 67899999999999999998
Q ss_pred cCC-cceecCCcchhHHHHHHHhhccccC
Q psy160 165 HRF-PSIYRGDLSEEEEVLQWLITQKTED 192 (346)
Q Consensus 165 ~g~-~~~y~g~~~~~~~i~~fi~~~~~~~ 192 (346)
+|+ ...+.|..+.+ ++.+|+.+...++
T Consensus 80 ~G~~~~~~~G~~~~~-~l~~~l~~~~~~~ 107 (112)
T 2voc_A 80 DGEVVETSVGFKPKE-ALQELVNKHLLEH 107 (112)
T ss_dssp TTEEEEEEESCCCHH-HHHHHHHTTSCSC
T ss_pred CCEEEEEEeCCCCHH-HHHHHHHHHHHhh
Confidence 888 45688988844 8999999887653
No 41
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.69 E-value=2.2e-16 Score=121.80 Aligned_cols=99 Identities=14% Similarity=0.207 Sum_probs=84.6
Q ss_pred cCceeecCHHHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 86 KNEIEEVNRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
+......+.++|++++. ++++++|.||++||++|+.+.|.|+++++.+.+ +.++.+| ++.++++|+|.++||+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCccccEE
Confidence 34677889999999998 789999999999999999999999999998865 6777665 7789999999999999
Q ss_pred EEEecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 161 VYFRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 161 ~~~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++|++|+. ..+.|. + .+.|.+++.+.
T Consensus 89 ~~~~~G~~~~~~~G~-~-~~~l~~~l~~~ 115 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-N-KEKLEATINEL 115 (116)
T ss_dssp EEESSSSEEEEEESC-C-HHHHHHHHHHH
T ss_pred EEEeCCeEEEEEcCC-C-HHHHHHHHHHh
Confidence 99998884 458888 5 44899988753
No 42
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.69 E-value=5.6e-17 Score=125.22 Aligned_cols=105 Identities=16% Similarity=0.377 Sum_probs=91.2
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccC--CCcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDN--MDITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~--~~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
.+.+.+++.++|++.+.++++++|+||++||++|+++.|.+.++++.+.. .++.++.+| ++.++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 45789999999999999999999999999999999999999999998853 347777766 5689999999999999
Q ss_pred EEEecCCc---ceecCCcchhHHHHHHHhhcccc
Q psy160 161 VYFRHRFP---SIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 161 ~~~~~g~~---~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
++|++|+. ..|.|..+.+ .+.+|+.+...+
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~-~l~~~l~~~~~~ 118 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREAD-DIVNWLKKRTGP 118 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHH-HHHHHHHTTSCC
T ss_pred EEEeCCCcCCcccccCccCHH-HHHHHHHhccCC
Confidence 99998874 5788988744 899999987655
No 43
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.69 E-value=8.4e-17 Score=128.05 Aligned_cols=80 Identities=13% Similarity=0.200 Sum_probs=71.0
Q ss_pred EEEc-cHHHHHHHHh--ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 194 IELI-TRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 194 v~~l-~~~~~~~~~~--~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
+..+ +.++|++.+. ++++++|.|||+||+||+.+.|.++++|+++.+ .+.|+++ ++++++++|+|++.||+++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~~e~a~~y~V~siPT~~f 101 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEVPDFNTMYELYDPVSVMF 101 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTTTTCCSSEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCCHHHHHHcCCCCCCEEEE
Confidence 3344 5689988653 678999999999999999999999999999986 6889998 7899999999999999999
Q ss_pred EeCCeEE
Q psy160 268 FRNGNPL 274 (346)
Q Consensus 268 ~~~g~~~ 274 (346)
|++|+.+
T Consensus 102 Fk~G~~v 108 (160)
T 2av4_A 102 FYRNKHM 108 (160)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 9999986
No 44
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.69 E-value=6.2e-17 Score=126.86 Aligned_cols=101 Identities=12% Similarity=0.262 Sum_probs=84.1
Q ss_pred cCcEEEccHHHHHHHHh-ccceEEEEEEcCCChhhHHHHHHHHHHHhhcC----cCceEEEEE---cChhhhhhCCCccc
Q psy160 191 EDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECD----IYGIHMVKI---QDPQLAKRYSIKTF 262 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~----~~~i~~~~i---~~~~~~~~~~i~~~ 262 (346)
++.+..++.++|++.+. ++++++|.||++||++|+.+.|.|+++|+.+. ...+.++.+ .+++++++|+|+++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 45778999999999874 68999999999999999999999999998753 125899998 67899999999999
Q ss_pred cEEEEEeCCeE---EEeecCccccccchhhhhhhc
Q psy160 263 PALVYFRNGNP---LIFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 263 Pti~~~~~g~~---~~y~g~~~~~~~~~~~~~i~~ 294 (346)
||+++|++|+. ..|.|.++.+. +..|++.
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~~---l~~~i~~ 125 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLSL---VDSFVFQ 125 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHHH---HHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccHHH---HHHHHHh
Confidence 99999998753 68999886433 5555543
No 45
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.68 E-value=2.4e-16 Score=123.95 Aligned_cols=101 Identities=12% Similarity=0.097 Sum_probs=87.2
Q ss_pred ceeecCHHHHHHHHhcCCcEEEEEECCC--ChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 88 EIEEVNRRMLDKLLEENEFVTVFFYETD--HKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~--C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
.+..+|+++|++.+.++++++|.|+++| |++|+.+.|.++++++++.+..+.|+++| ++.++.+|||++.||+++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlil 97 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLV 97 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEE
Confidence 4568999999999987789999999999 99999999999999999854337888877 889999999999999999
Q ss_pred EecCCcc-eecCCcchhHHHHHHHhhcc
Q psy160 163 FRHRFPS-IYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 163 ~~~g~~~-~y~g~~~~~~~i~~fi~~~~ 189 (346)
|++|+.+ +..|..... .+.+++.+..
T Consensus 98 Fk~G~~v~~~~G~~~k~-~l~~~i~~~l 124 (140)
T 2qgv_A 98 FTGGNYRGVLNGIHPWA-ELINLMRGLV 124 (140)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred EECCEEEEEEecCCCHH-HHHHHHHHHh
Confidence 9999954 477887744 8999988654
No 46
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.68 E-value=3.5e-16 Score=117.97 Aligned_cols=98 Identities=14% Similarity=0.221 Sum_probs=83.9
Q ss_pred eeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEec
Q psy160 89 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRH 165 (346)
Q Consensus 89 v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~ 165 (346)
+.++++++|++.+.++++++|.||++||++|+.+.|.++++++.+.+. +.++.+| ++.++++|+|.++||+++|++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 80 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDENPETTSQFGIMSIPTLILFKG 80 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcCCHHHHHHcCCccccEEEEEeC
Confidence 678899999988888899999999999999999999999999988543 6666665 678999999999999999988
Q ss_pred CC-cceecCCcchhHHHHHHHhhc
Q psy160 166 RF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 166 g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
|+ ...+.|..+.+ .+.+++.+.
T Consensus 81 G~~~~~~~G~~~~~-~l~~~l~~~ 103 (105)
T 1nsw_A 81 GRPVKQLIGYQPKE-QLEAQLADV 103 (105)
T ss_dssp TEEEEEEESCCCHH-HHHHHTTTT
T ss_pred CeEEEEEecCCCHH-HHHHHHHHH
Confidence 88 44588888744 899888764
No 47
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.67 E-value=3.8e-16 Score=117.91 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=84.9
Q ss_pred ceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEe
Q psy160 88 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 164 (346)
.+.+++.++|++.+ ++++++|.||++||++|+.+.|.++++++.+.+. +.++.++ ++.++++|+|+++||+++|+
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 68889999999999 8899999999999999999999999999998653 6666655 77899999999999999999
Q ss_pred cCC-cceecCCcchhHHHHHHHhhc
Q psy160 165 HRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 165 ~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+|+ ...+.|..+.+ ++.+++.+.
T Consensus 82 ~G~~~~~~~g~~~~~-~l~~~l~~~ 105 (106)
T 3die_A 82 DGQPVDKVVGFQPKE-NLAEVLDKH 105 (106)
T ss_dssp TTEEEEEEESCCCHH-HHHHHHHTT
T ss_pred CCeEEEEEeCCCCHH-HHHHHHHHh
Confidence 887 44688988744 899998764
No 48
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.67 E-value=1.8e-16 Score=124.14 Aligned_cols=88 Identities=9% Similarity=0.167 Sum_probs=77.2
Q ss_pred cEEEccHHHHHHHHhccc-eEEEEEEcCCC--hhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 193 RIELITRVMLETMVEETQ-YLAVYFYKLNC--NICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~-~~lv~F~~~~c--~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
....++.++|++.+.+.+ +++|+|||+|| ++|+.+.|.++++++++.+ ++.++++ .+++++.+|+|+++||++
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 445789999999776555 99999999999 9999999999999999986 8999999 678999999999999999
Q ss_pred EEeCCeEEE-eecCcc
Q psy160 267 YFRNGNPLI-FEGENK 281 (346)
Q Consensus 267 ~~~~g~~~~-y~g~~~ 281 (346)
+|++|+.+. ..|..+
T Consensus 95 lFkdG~~v~~~vG~~~ 110 (137)
T 2qsi_A 95 VVQPERTLGVIAKIQD 110 (137)
T ss_dssp EEECCEEEEEEESCCC
T ss_pred EEECCEEEEEEeCCCC
Confidence 999998765 456665
No 49
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.67 E-value=5.8e-16 Score=117.33 Aligned_cols=101 Identities=20% Similarity=0.313 Sum_probs=87.0
Q ss_pred ceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEe
Q psy160 88 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 164 (346)
.+.+++.++|++++.++++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+| ++.++++|+|.++||+++|+
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 578899999999998899999999999999999999999999998864 37777765 77899999999999999998
Q ss_pred cCCc-ceecCCcchhHHHHHHHhhccc
Q psy160 165 HRFP-SIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 165 ~g~~-~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
+|+. ..+.|..+.+ ++.+|+.+...
T Consensus 81 ~g~~~~~~~g~~~~~-~l~~~l~~~l~ 106 (109)
T 2yzu_A 81 DGQPVEVLVGAQPKR-NYQAKIEKHLP 106 (109)
T ss_dssp TTEEEEEEESCCCHH-HHHHHHHTTC-
T ss_pred CCcEeeeEeCCCCHH-HHHHHHHHHhh
Confidence 8884 4588988744 89999987643
No 50
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.67 E-value=5.2e-16 Score=116.44 Aligned_cols=98 Identities=20% Similarity=0.389 Sum_probs=84.4
Q ss_pred eeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEec
Q psy160 89 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRH 165 (346)
Q Consensus 89 v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~ 165 (346)
|.+++.++|++.+.++++++|+||++||++|+.+.|.++++++.+.+ +.++.++ ++.++++|+|.++||+++|++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 78 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENPDIAARYGVMSLPTVIFFKD 78 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSCEEEEEET
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCHHHHHhCCccccCEEEEEEC
Confidence 46789999999998889999999999999999999999999998865 6666655 778999999999999999988
Q ss_pred CCc-ceecCCcchhHHHHHHHhhcc
Q psy160 166 RFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 166 g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
|+. ..+.|..+.+ ++.+|+.+..
T Consensus 79 g~~~~~~~g~~~~~-~l~~~l~~~l 102 (104)
T 2e0q_A 79 GEPVDEIIGAVPRE-EIEIRIKNLL 102 (104)
T ss_dssp TEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred CeEhhhccCCCCHH-HHHHHHHHHh
Confidence 884 4688987744 8999987653
No 51
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.67 E-value=1.5e-16 Score=125.02 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=78.9
Q ss_pred cEEEccHHHHHHHHhccceEEEEEEcCC--ChhhHHHHHHHHHHHhhcCcCc-eEEEEE---cChhhhhhCCCccccEEE
Q psy160 193 RIELITRVMLETMVEETQYLAVYFYKLN--CNICDQILEGLEKVDDECDIYG-IHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~--c~~c~~~~~~~~~la~~~~~~~-i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
.+..++.++|++.+.++++++|+||++| |++|+.+.|.++++++++.+ + +.|+++ .+++++.+|+|+++||++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g-~~v~~~KVdvDe~~~lA~~ygV~sIPTli 96 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD-YTWQVAIADLEQSEAIGDRFGAFRFPATL 96 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT-SCCEEEECCHHHHHHHHHHHTCCSSSEEE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC-CeEEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 4568899999998878889999999999 99999999999999999987 7 999999 688999999999999999
Q ss_pred EEeCCeEEE-eecCcc
Q psy160 267 YFRNGNPLI-FEGENK 281 (346)
Q Consensus 267 ~~~~g~~~~-y~g~~~ 281 (346)
+|++|+.+. ..|..+
T Consensus 97 lFk~G~~v~~~~G~~~ 112 (140)
T 2qgv_A 97 VFTGGNYRGVLNGIHP 112 (140)
T ss_dssp EEETTEEEEEEESCCC
T ss_pred EEECCEEEEEEecCCC
Confidence 999998764 456654
No 52
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.67 E-value=4.1e-16 Score=124.38 Aligned_cols=101 Identities=19% Similarity=0.243 Sum_probs=86.9
Q ss_pred CceeecCHHHHH-HHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLD-KLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~-~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
..+.+++.++|+ .++.++++++|+||++||++|+.+.|.|.++++.+.+ ++.++.+| ++.++++|+|.++||+++
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 479999999999 5566778999999999999999999999999999865 37777665 789999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
|++|+. ..|.|..+.+ .|.+|+.+..
T Consensus 85 ~~~G~~~~~~~G~~~~~-~l~~~l~~~l 111 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIYPS-ILKNAVRDML 111 (140)
T ss_dssp EETTEEEEEEESSCCHH-HHHHHHHHHH
T ss_pred EeCCcEEEEEcCCCCHH-HHHHHHHHHh
Confidence 999884 4688988744 8999988754
No 53
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.66 E-value=5.6e-16 Score=125.85 Aligned_cols=103 Identities=11% Similarity=0.204 Sum_probs=88.7
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+..+.+++.++|++.+.++++++|+||++||++|+.+.|.|+++++.+.+. +.|+.+| ++.++++|+|+++||+++
T Consensus 46 ~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 124 (155)
T 2ppt_A 46 TGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQAHPAVAGRHRIQGIPAFIL 124 (155)
T ss_dssp CSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTTSTHHHHHTTCCSSSEEEE
T ss_pred CCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCccHHHHHHcCCCcCCEEEE
Confidence 346889999999999877889999999999999999999999999998643 7777776 778999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhccc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
|++|+. ..+.|..+.+ +|.+|+.+...
T Consensus 125 ~~~G~~~~~~~G~~~~~-~l~~~l~~~l~ 152 (155)
T 2ppt_A 125 FHKGRELARAAGARPAS-ELVGFVRGKLG 152 (155)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHHHC
T ss_pred EeCCeEEEEecCCCCHH-HHHHHHHHHhc
Confidence 998884 4588988744 89999987643
No 54
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.66 E-value=5.6e-16 Score=117.17 Aligned_cols=100 Identities=17% Similarity=0.262 Sum_probs=84.8
Q ss_pred CceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.+.+++.++|++.+ .++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.++ ++.++++|+|.++||+++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNPETPNAYQVRSIPTLML 80 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCHHHHHTTCCSSSEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCHHHHHhcCCCccCEEEE
Confidence 468899999998776 5678999999999999999999999999998854 47777765 678999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.|..+.+ .+.+|+.+.
T Consensus 81 ~~~G~~~~~~~G~~~~~-~l~~~l~~~ 106 (107)
T 2i4a_A 81 VRDGKVIDKKVGALPKS-QLKAWVESA 106 (107)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHT
T ss_pred EeCCEEEEEecCCCCHH-HHHHHHHhc
Confidence 988884 4588988744 899998764
No 55
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.66 E-value=6.7e-16 Score=117.60 Aligned_cols=89 Identities=21% Similarity=0.482 Sum_probs=79.6
Q ss_pred CcEEEccHHHHHHHH-hccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 192 DRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
..+..++.++|++.+ +++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|.++||+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 82 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKTLFQRFSLKGVPQILY 82 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSCEEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChhHHHhcCCCcCCEEEE
Confidence 356788999999987 7889999999999999999999999999999986 6888888 6788999999999999999
Q ss_pred EeCCeEE-EeecCcc
Q psy160 268 FRNGNPL-IFEGENK 281 (346)
Q Consensus 268 ~~~g~~~-~y~g~~~ 281 (346)
|++|+.+ .+.|..+
T Consensus 83 ~~~g~~~~~~~g~~~ 97 (111)
T 3gnj_A 83 FKDGEYKGKMAGDVE 97 (111)
T ss_dssp EETTEEEEEEESSCC
T ss_pred EECCEEEEEEeccCC
Confidence 9999865 5788765
No 56
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.66 E-value=4.1e-16 Score=122.12 Aligned_cols=99 Identities=11% Similarity=0.139 Sum_probs=85.0
Q ss_pred eeecCHHHHHHHHhcCC-cEEEEEECCCC--hhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 89 IEEVNRRMLDKLLEENE-FVTVFFYETDH--KDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 89 v~~l~~~~~~~~~~~~~-~~lv~F~~~~C--~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
..++|+++|++.+.+++ +++|.||++|| ++|+.+.|.++++++++.+ ++.++++| ++.++.+|||++.||+++
T Consensus 17 ~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~~~la~~ygV~siPTlil 95 (137)
T 2qsi_A 17 PTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAERGLMARFGVAVCPSLAV 95 (137)
T ss_dssp CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGHHHHHHHHTCCSSSEEEE
T ss_pred CcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCCHHHHHHcCCccCCEEEE
Confidence 44889999999987776 99999999999 9999999999999999854 37888776 788999999999999999
Q ss_pred EecCCcc-eecCCcchhHHHHHHHhhcc
Q psy160 163 FRHRFPS-IYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 163 ~~~g~~~-~y~g~~~~~~~i~~fi~~~~ 189 (346)
|++|+.+ +..|..... .+.+++.+..
T Consensus 96 FkdG~~v~~~vG~~~k~-~l~~~l~~~l 122 (137)
T 2qsi_A 96 VQPERTLGVIAKIQDWS-SYLAQIGAML 122 (137)
T ss_dssp EECCEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred EECCEEEEEEeCCCCHH-HHHHHHHHHh
Confidence 9999954 477887744 7888887643
No 57
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.66 E-value=5.1e-16 Score=117.71 Aligned_cols=100 Identities=19% Similarity=0.323 Sum_probs=84.4
Q ss_pred CceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.|.+++.++|++.+ .++++++|.||++||++|+.+.|.++++++.+.+ ++.++.++ ++.++++|+|.++||+++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCTTHHHHTTCCSSSEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCcccCEEEE
Confidence 468899999999665 5678999999999999999999999999998854 37777765 678999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.|..+.+ ++.+|+.+.
T Consensus 81 ~~~G~~~~~~~G~~~~~-~l~~~l~~~ 106 (108)
T 2trx_A 81 FKNGEVAATKVGALSKG-QLKEFLDAN 106 (108)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHH
T ss_pred EeCCEEEEEEecCCCHH-HHHHHHHHh
Confidence 988884 4578888744 899988764
No 58
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.66 E-value=7.9e-16 Score=117.20 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=83.0
Q ss_pred CceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEE
Q psy160 87 NEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~ 163 (346)
......+.++|++.+.++++++|.||++||++|+.+.|.++++++.+.+ +.++.++ ++.++++|+|.++||+++|
T Consensus 7 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 84 (109)
T 3f3q_A 7 MVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDELGDVAQKNEVSAMPTLLLF 84 (109)
T ss_dssp CCEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4566778999999999999999999999999999999999999998865 5666554 7789999999999999999
Q ss_pred ecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 164 RHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 164 ~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++|+. ..+.|. +. ++|.+++.+.
T Consensus 85 ~~G~~~~~~~G~-~~-~~l~~~i~~~ 108 (109)
T 3f3q_A 85 KNGKEVAKVVGA-NP-AAIKQAIAAN 108 (109)
T ss_dssp ETTEEEEEEESS-CH-HHHHHHHHHH
T ss_pred ECCEEEEEEeCC-CH-HHHHHHHHhh
Confidence 98874 457787 43 4888888753
No 59
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.66 E-value=9.7e-16 Score=121.57 Aligned_cols=102 Identities=14% Similarity=0.224 Sum_probs=87.6
Q ss_pred CceeecCHHHHHHHHh------------cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHh
Q psy160 87 NEIEEVNRRMLDKLLE------------ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARK 151 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~~------------~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~ 151 (346)
..+.++++++|++.+. ++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.++ +..++++
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHH
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHH
Confidence 4788999999999886 357899999999999999999999999998854 37777665 6789999
Q ss_pred hCCCCcceEEEE-ecCCcceecCCcchhHHHHHHHhhccc
Q psy160 152 WGVTKLPAVVYF-RHRFPSIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 152 ~~i~~~Ptl~~~-~~g~~~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
|+|.++||+++| ++|+...+.|..+.+ .|.+|+.+...
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~~~~G~~~~~-~l~~~l~~~~~ 126 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPEMAQGAMPKA-SFKKAIDEFLL 126 (136)
T ss_dssp TTCCSSCEEEEECSSSCCEEEESCCCHH-HHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCCcEEEEeCCCCHH-HHHHHHHHHhh
Confidence 999999999999 788877899988844 89999987654
No 60
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=3.9e-16 Score=123.03 Aligned_cols=103 Identities=14% Similarity=0.272 Sum_probs=87.5
Q ss_pred cCceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccC---CCcEEEEeC---ChhhHHhhCCCCcc
Q psy160 86 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDN---MDITFVKMA---DPRYARKWGVTKLP 158 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~---~~i~~~~~~---~~~l~~~~~i~~~P 158 (346)
.+.+..++.++|++.+ .++++++|+||++||++|+.+.|.|.++++.+.. .++.++.+| ++.++++|+|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 3478999999999976 5668999999999999999999999999998851 347788776 67899999999999
Q ss_pred eEEEEecCC-cceecCCcchhHHHHHHHhhcc
Q psy160 159 AVVYFRHRF-PSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 159 tl~~~~~g~-~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
|+++|.+|+ ...|.|.++.+ ++.+|+.+..
T Consensus 86 t~~~~~~g~~~~~~~G~~~~~-~l~~~l~~~~ 116 (133)
T 1x5d_A 86 TIKIFQKGESPVDYDGGRTRS-DIVSRALDLF 116 (133)
T ss_dssp EEEEEETTEEEEEECSCCSHH-HHHHHHHHHH
T ss_pred eEEEEeCCCceEEecCCCCHH-HHHHHHHHHh
Confidence 999999887 55689988744 8999988754
No 61
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=5.7e-16 Score=121.08 Aligned_cols=107 Identities=19% Similarity=0.359 Sum_probs=87.4
Q ss_pred cCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 191 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
++.+..++.++|+++++. .++|.||++||++|+.+.|.+.++++.+.+.++.++.+ .+.+++++|+|+++||+++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYH 83 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEE
Confidence 456788999999987754 38999999999999999999999999987546888888 6788999999999999999
Q ss_pred EeCCeEEEeecCccccccchhhhhhhccCCCCCCc
Q psy160 268 FRNGNPLIFEGENKILKGTYIGTYISTKAFSLIPF 302 (346)
Q Consensus 268 ~~~g~~~~y~g~~~~~~~~~~~~~i~~~~~~~~~~ 302 (346)
|++|+...|.|.++.+. +..+++....+.+..
T Consensus 84 ~~~G~~~~~~G~~~~~~---l~~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 84 CKDGEFRRYQGPRTKKD---FINFISDKEWKSIEP 115 (126)
T ss_dssp EETTEEEECCSCCCHHH---HHHHHHTCGGGGSCE
T ss_pred EeCCeEEEeecCCCHHH---HHHHHHHHhhccCCC
Confidence 99999878888876333 666666654444433
No 62
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.66 E-value=9e-16 Score=122.34 Aligned_cols=102 Identities=21% Similarity=0.315 Sum_probs=86.6
Q ss_pred cCceeecCHHHHHHHHhc------------CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHH
Q psy160 86 KNEIEEVNRRMLDKLLEE------------NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYAR 150 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~------------~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~ 150 (346)
+..+..++.++|+..+.. +++++|.||++||++|+.+.|.|.++++.+.+ ++.++.++ ++.+++
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELAR 99 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHH
Confidence 457999999999998875 68999999999999999999999999999864 36776665 778999
Q ss_pred hhCCCCcceEEEE-ecCCcceecCCcchhHHHHHHHhhcc
Q psy160 151 KWGVTKLPAVVYF-RHRFPSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 151 ~~~i~~~Ptl~~~-~~g~~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
+|+|.++||+++| ++|+...+.|..+.+ .|.+|+.+..
T Consensus 100 ~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~-~l~~~l~~~l 138 (141)
T 3hxs_A 100 DFGIQSIPTIWFVPMKGEPQVNMGALSKE-QLKGYIDKVL 138 (141)
T ss_dssp HTTCCSSSEEEEECSSSCCEEEESCCCHH-HHHHHHHHTT
T ss_pred HcCCCCcCEEEEEeCCCCEEEEeCCCCHH-HHHHHHHHHH
Confidence 9999999999999 467777899988844 8999988754
No 63
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.66 E-value=8.3e-16 Score=118.76 Aligned_cols=97 Identities=16% Similarity=0.223 Sum_probs=83.2
Q ss_pred ceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-------ChhhHHhhCCCCcceE
Q psy160 88 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-------DPRYARKWGVTKLPAV 160 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-------~~~l~~~~~i~~~Ptl 160 (346)
.+..++.+++++.+.++++++|+||++||++|+.+.|.+.++++.+. ..+.++.++ ...++++|+|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~ 91 (118)
T 1zma_A 13 DLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETK-AHIYFINSEEPSQLNDLQAFRSRYGIPTVPGF 91 (118)
T ss_dssp TSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC-CCCEEEETTCGGGHHHHHHHHHHHTCCSSCEE
T ss_pred hhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcC-CeEEEEECCCcCcHHHHHHHHHHcCCCCCCeE
Confidence 67889999999999888999999999999999999999999998864 347788665 2478899999999999
Q ss_pred EEEecCCc-ceecCCcchhHHHHHHHh
Q psy160 161 VYFRHRFP-SIYRGDLSEEEEVLQWLI 186 (346)
Q Consensus 161 ~~~~~g~~-~~y~g~~~~~~~i~~fi~ 186 (346)
++|++|+. ..+.|..+.+ +|.+|+.
T Consensus 92 ~~~~~G~~~~~~~G~~~~~-~l~~~l~ 117 (118)
T 1zma_A 92 VHITDGQINVRCDSSMSAQ-EIKDFAG 117 (118)
T ss_dssp EEEETTEEEEECCTTCCHH-HHHHHHT
T ss_pred EEEECCEEEEEecCCCCHH-HHHHHhh
Confidence 99998874 4688888744 8998875
No 64
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.65 E-value=8.3e-16 Score=123.72 Aligned_cols=103 Identities=17% Similarity=0.364 Sum_probs=89.4
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
...+..++.++|++.+.++++++|+||++||++|+.+.|.|+++++.+.. ++.++.+| ++.++++|+|.++||+++
T Consensus 37 ~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 115 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPALSTRFRIRSIPTIML 115 (148)
T ss_dssp CCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHHHHHHCCCCccCEEEE
Confidence 45789999999999998889999999999999999999999999999854 37777765 778999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhccc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
|++|+. ..|.|..+.+ .|.+|+.+...
T Consensus 116 ~~~G~~~~~~~G~~~~~-~l~~~l~~~l~ 143 (148)
T 3p2a_A 116 YRNGKMIDMLNGAVPKA-PFDNWLDEQLS 143 (148)
T ss_dssp EETTEEEEEESSCCCHH-HHHHHHHHHHH
T ss_pred EECCeEEEEEeCCCCHH-HHHHHHHHHhc
Confidence 998884 4588988844 89999987643
No 65
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.65 E-value=4.3e-16 Score=123.96 Aligned_cols=99 Identities=15% Similarity=0.239 Sum_probs=80.8
Q ss_pred eeecC-HHHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 89 IEEVN-RRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 89 v~~l~-~~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+..++ .++|++.+. ++++++|.|+|+||++|+.+.|.++++|+++.+. +.|+++| .++++.+|+|.+.||+++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~~e~a~~y~V~siPT~~f 101 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEVPDFNTMYELYDPVSVMF 101 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTTTTCCSSEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCCCCCEEEE
Confidence 55564 689988774 4679999999999999999999999999998542 6666665 789999999999999999
Q ss_pred EecCCcc----------eecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFPS----------IYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~~----------~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+.+ +..|...+.++|.++++..
T Consensus 102 Fk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 102 FYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp EETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred EECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 9999876 5678765344788887654
No 66
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1e-15 Score=116.98 Aligned_cols=99 Identities=14% Similarity=0.279 Sum_probs=80.5
Q ss_pred eeecCH-HHHHHHHhc---CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEE
Q psy160 89 IEEVNR-RMLDKLLEE---NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 161 (346)
Q Consensus 89 v~~l~~-~~~~~~~~~---~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~ 161 (346)
|.+++. ++|++.+.+ +++++|.||++||++|+.+.|.++++++.+...++.++.+| ++.++++|+|.++||++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 567776 999999976 78999999999999999999999999998643457787776 77899999999999999
Q ss_pred EEecCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 162 YFRHRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 162 ~~~~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
+|++|+. ..+.|... . +|.+++.+..
T Consensus 82 ~~~~G~~~~~~~G~~~-~-~l~~~l~~~~ 108 (112)
T 3d6i_A 82 IIHKGTILKELSGADP-K-EYVSLLEDCK 108 (112)
T ss_dssp EEETTEEEEEECSCCH-H-HHHHHHHHHH
T ss_pred EEECCEEEEEecCCCH-H-HHHHHHHHHH
Confidence 9998884 45778743 4 6888887643
No 67
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.65 E-value=1.6e-15 Score=115.68 Aligned_cols=98 Identities=14% Similarity=0.223 Sum_probs=82.9
Q ss_pred ceeec-CHHHHHHHHhc----CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcce
Q psy160 88 EIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 159 (346)
Q Consensus 88 ~v~~l-~~~~~~~~~~~----~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Pt 159 (346)
.+.++ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+| ++.++++|+|.++||
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt 81 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITAMPT 81 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCBSSE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCcccE
Confidence 46667 67999999876 78999999999999999999999999998864 47777765 678999999999999
Q ss_pred EEEEecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 160 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 160 l~~~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
+++|++|+. ..+.|. + .+++.+++.+.
T Consensus 82 ~~~~~~G~~~~~~~G~-~-~~~l~~~l~~~ 109 (112)
T 1ep7_A 82 FHVYKDGVKADDLVGA-S-QDKLKALVAKH 109 (112)
T ss_dssp EEEEETTEEEEEEESC-C-HHHHHHHHHHH
T ss_pred EEEEECCeEEEEEcCC-C-HHHHHHHHHHH
Confidence 999998884 457887 5 44898888764
No 68
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.65 E-value=5.4e-16 Score=121.83 Aligned_cols=102 Identities=13% Similarity=0.269 Sum_probs=86.6
Q ss_pred cCceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEE
Q psy160 86 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 161 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~ 161 (346)
.+.+.+++.++|++.+ .++++++|+||++||++|+.+.|.|.++++.+.+. +.++.+| +..++++|+|.++||++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADKHQSLGGQYGVQGFPTIK 94 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCCCHHHHHHcCCCccCEEE
Confidence 4578999999999865 56789999999999999999999999999988653 7777665 77899999999999999
Q ss_pred EEecCC--cceecCCcchhHHHHHHHhhcc
Q psy160 162 YFRHRF--PSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 162 ~~~~g~--~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
+|.+|. ...|.|..+.+ ++.+|+.+..
T Consensus 95 ~~~~~~~~~~~~~G~~~~~-~l~~~l~~~l 123 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGE-AIVDAALSAL 123 (130)
T ss_dssp EESSCTTSCEECCSCCSHH-HHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHH-HHHHHHHHHH
Confidence 998765 56789988744 8999988754
No 69
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.64 E-value=1.1e-15 Score=125.59 Aligned_cols=104 Identities=9% Similarity=0.044 Sum_probs=85.6
Q ss_pred CceeecCHHHHHHHHhcC--CcEEEEEEC-------CCChhHHHHHHHHHHHHhhccC----CCcEEEEeC---ChhhHH
Q psy160 87 NEIEEVNRRMLDKLLEEN--EFVTVFFYE-------TDHKDSVKVLERLEKIDGETDN----MDITFVKMA---DPRYAR 150 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~~~~--~~~lv~F~~-------~~C~~c~~~~~~~~~~a~~~~~----~~i~~~~~~---~~~l~~ 150 (346)
+.|.+||+++|++++... .+++|+|+| +||++|+.+.|+|+++|+++.. .++.|+++| ++++++
T Consensus 18 ~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~ 97 (178)
T 3ga4_A 18 TGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVK 97 (178)
T ss_dssp TSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHH
T ss_pred CCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHH
Confidence 378999999999988643 468999999 4999999999999999999841 248888876 889999
Q ss_pred hhCCCCcceEEEEecCC--c-----------cee---cC-CcchhHHHHHHHhhcccc
Q psy160 151 KWGVTKLPAVVYFRHRF--P-----------SIY---RG-DLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 151 ~~~i~~~Ptl~~~~~g~--~-----------~~y---~g-~~~~~~~i~~fi~~~~~~ 191 (346)
+|||+++|||++|++|. . ..| .| .++.+ .|.+|+.+....
T Consensus 98 ~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae-~la~fi~~~t~~ 154 (178)
T 3ga4_A 98 DLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTL-QFGDFLAKILNI 154 (178)
T ss_dssp HTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHH-HHHHHHHHHHTC
T ss_pred HcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHH-HHHHHHHHhcCC
Confidence 99999999999999875 2 345 24 56644 899999987764
No 70
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.64 E-value=1e-15 Score=118.86 Aligned_cols=101 Identities=11% Similarity=0.154 Sum_probs=83.9
Q ss_pred CceeecCHHHHHH-HHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLDK-LLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~~-~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.+.+++.++|++ ++.++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.+| ++.++++|+|.++||+++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 81 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKL 81 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEEE
Confidence 4688999999965 556778999999999999999999999999998864 47777765 778999999999999999
Q ss_pred EecCC-cceecCC----cchhHHHHHHHhhcc
Q psy160 163 FRHRF-PSIYRGD----LSEEEEVLQWLITQK 189 (346)
Q Consensus 163 ~~~g~-~~~y~g~----~~~~~~i~~fi~~~~ 189 (346)
|.+|. ...+.|. .+ .+.|.+|+.+..
T Consensus 82 ~~~~~~~~~~~g~~~~~~~-~~~l~~~l~~~l 112 (122)
T 3aps_A 82 YQYERAKKSIWEEQINSRD-AKTIAALIYGKL 112 (122)
T ss_dssp EEEEGGGTEEEEEEECCSC-HHHHHHHHHHHH
T ss_pred EeCCCccceeeccccCcCC-HHHHHHHHHHHH
Confidence 97654 5557775 55 448999987754
No 71
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.64 E-value=2e-15 Score=114.16 Aligned_cols=99 Identities=19% Similarity=0.323 Sum_probs=83.0
Q ss_pred ceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEE
Q psy160 88 EIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 88 ~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~ 163 (346)
.+.+++.++|++.+ .++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.++ ++.++++|+|.++||+++|
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 36789999999876 4568999999999999999999999999998854 37777665 6789999999999999999
Q ss_pred ecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 164 RHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 164 ~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++|+. ..+.|..+.+ ++.+++.+.
T Consensus 81 ~~G~~~~~~~G~~~~~-~l~~~l~~~ 105 (107)
T 1dby_A 81 KGGKKCETIIGAVPKA-TIVQTVEKY 105 (107)
T ss_dssp SSSSEEEEEESCCCHH-HHHHHHHHH
T ss_pred eCCEEEEEEeCCCCHH-HHHHHHHHH
Confidence 88884 4588888744 788888754
No 72
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.64 E-value=1.9e-15 Score=115.59 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=84.7
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.....++.++|+++++++++++|+||++||++|+.+.|.++++++.+.+ +.++.++ ++.++++|+|.++||+++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 85 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEVSEVTEKENITSMPTFKV 85 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 34778899999999999999999999999999999999999999998754 6666665 678999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.|. + .++|.+++.+.
T Consensus 86 ~~~G~~~~~~~G~-~-~~~l~~~l~~~ 110 (112)
T 1syr_A 86 YKNGSSVDTLLGA-N-DSALKQLIEKY 110 (112)
T ss_dssp EETTEEEEEEESC-C-HHHHHHHHHTT
T ss_pred EECCcEEEEEeCC-C-HHHHHHHHHHh
Confidence 998884 457887 5 45899998764
No 73
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.64 E-value=1.3e-15 Score=123.35 Aligned_cols=116 Identities=16% Similarity=0.336 Sum_probs=87.2
Q ss_pred ceeecC-HHHHHHHHhc--CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEE
Q psy160 88 EIEEVN-RRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 161 (346)
Q Consensus 88 ~v~~l~-~~~~~~~~~~--~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~ 161 (346)
.+..++ .++|++++.+ +++++|.||++||++|+.+.|.|.++++.+. ++.++.+| ++.++++|+|.++||++
T Consensus 13 ~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 90 (153)
T 2wz9_A 13 AVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGVPEVSEKYEISSVPTFL 90 (153)
T ss_dssp CSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred CeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 567776 7999999988 8899999999999999999999999999874 37777665 67899999999999999
Q ss_pred EEecCCcc-eecCCcchhHHHHHHHhhccc------cCcEEEccHHHHHHHHh
Q psy160 162 YFRHRFPS-IYRGDLSEEEEVLQWLITQKT------EDRIELITRVMLETMVE 207 (346)
Q Consensus 162 ~~~~g~~~-~y~g~~~~~~~i~~fi~~~~~------~~~v~~l~~~~~~~~~~ 207 (346)
+|.+|+.. .+.|. ..+ +|.+++.+... +..+..++.++|+++..
T Consensus 91 ~~~~G~~~~~~~G~-~~~-~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~~~ 141 (153)
T 2wz9_A 91 FFKNSQKIDRLDGA-HAP-ELTKKVQRHASSGSFLPSAKVKVDTDPNSSSVDK 141 (153)
T ss_dssp EEETTEEEEEEESS-CHH-HHHHHHHHHSCTTSSCSCCCCCCC----------
T ss_pred EEECCEEEEEEeCC-CHH-HHHHHHHHHhccccCCCccccccCCCCChhhHHH
Confidence 99988854 46774 434 79999987653 33566778888877644
No 74
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.64 E-value=2.1e-15 Score=115.49 Aligned_cols=101 Identities=15% Similarity=0.249 Sum_probs=85.4
Q ss_pred CceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.+.+++.++|++.+ .++++++|.||++||++|+.+.|.++++++.+.+. +.++.++ ++.++++|+|.++||+++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPNPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTCHHHHHHTTCCSSSEEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCCHHHHHHcCCCceeEEEE
Confidence 368999999999875 56789999999999999999999999999988543 7777665 678999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
|++|+. ..+.|..+.+ .+.+|+.+..
T Consensus 86 ~~~G~~~~~~~g~~~~~-~l~~~l~~~l 112 (115)
T 1thx_A 86 VKGEQILDSTEGVISKD-KLLSFLDTHL 112 (115)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred EcCCEEEEEecCCCCHH-HHHHHHHHHh
Confidence 988884 4588988744 8999987653
No 75
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.64 E-value=1.9e-15 Score=115.26 Aligned_cols=99 Identities=15% Similarity=0.253 Sum_probs=83.0
Q ss_pred cCceeecCHHHHHHHHhc--CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC----ChhhHHhhCCCCcce
Q psy160 86 KNEIEEVNRRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----DPRYARKWGVTKLPA 159 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~--~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~----~~~l~~~~~i~~~Pt 159 (346)
.+.+.+++.++|++.+.+ +++++|.||++||++|+.+.|.+.++++.+.+ +.++.+| +..++++|+|+++||
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcchHHHHHHcCCCeeeE
Confidence 347899999999999874 68999999999999999999999999998764 6666554 578999999999999
Q ss_pred EEEEecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 160 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 160 l~~~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++++++|+. ..+.|.. .++|.+++.+.
T Consensus 82 ~~~~~~G~~~~~~~G~~--~~~l~~~l~~~ 109 (111)
T 2pu9_C 82 FKILKENSVVGEVTGAK--YDKLLEAIQAA 109 (111)
T ss_dssp EEEESSSSEEEEEESSC--HHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCC--HHHHHHHHHHh
Confidence 999999984 4577874 34788888754
No 76
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.64 E-value=2.3e-15 Score=116.48 Aligned_cols=102 Identities=15% Similarity=0.150 Sum_probs=85.7
Q ss_pred ccCceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 85 IKNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 85 ~~~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
.++.+..++.++|++.+ .++++++|+||++||++|+.+.|.+.++++.+.+ ++.++.++ +..++++|+|.++||+
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 89 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHTDLAIEYEVSAVPTV 89 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcccEE
Confidence 34589999999999865 5568999999999999999999999999998754 37777665 6789999999999999
Q ss_pred EEEecCC-cceecCCcchhHHHHHHHhhc
Q psy160 161 VYFRHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 161 ~~~~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
++|++|+ ...+.|..+.+ .+.+|+.+.
T Consensus 90 ~~~~~G~~~~~~~G~~~~~-~l~~~l~~~ 117 (119)
T 1w4v_A 90 LAMKNGDVVDKFVGIKDED-QLEAFLKKL 117 (119)
T ss_dssp EEEETTEEEEEEESCCCHH-HHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCCCHH-HHHHHHHHH
Confidence 9998887 44688887744 899988764
No 77
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.64 E-value=1.9e-16 Score=119.67 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=68.8
Q ss_pred CHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEecCCc-
Q psy160 93 NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFP- 168 (346)
Q Consensus 93 ~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~- 168 (346)
+.++|++.++++++++|.||++||++|+.+.|.++++++.+. ++.++.+| ++.++++|+|.++||+++|++|+.
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI 84 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CCCCEEEEEETTEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE
Confidence 457777777788999999999999999999999999999874 36666655 778999999999999999999884
Q ss_pred ceecCCcchhHHHHHHHhhc
Q psy160 169 SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 169 ~~y~g~~~~~~~i~~fi~~~ 188 (346)
..+.|..+.+ ++.+++.+.
T Consensus 85 ~~~~g~~~~~-~l~~~l~~~ 103 (105)
T 4euy_A 85 LRESRFISLE-NLERTIQLF 103 (105)
T ss_dssp EEEESSCCHH-HHHHHHHTT
T ss_pred EEEeCCcCHH-HHHHHHHHh
Confidence 4578888744 899998764
No 78
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.63 E-value=1.9e-15 Score=114.53 Aligned_cols=89 Identities=17% Similarity=0.313 Sum_probs=79.9
Q ss_pred CcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEE
Q psy160 192 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 268 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~ 268 (346)
+.+..++.++|+++++++++++|.||++||++|+.+.|.+.++++.+.+ .+.++.+ .+++++++|+|.++||+++|
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCcccCCEEEEE
Confidence 4677899999999998999999999999999999999999999999986 6888888 67899999999999999999
Q ss_pred eCCeEE-EeecCcc
Q psy160 269 RNGNPL-IFEGENK 281 (346)
Q Consensus 269 ~~g~~~-~y~g~~~ 281 (346)
++|+.+ .+.|..+
T Consensus 83 ~~g~~~~~~~g~~~ 96 (109)
T 3tco_A 83 VNGQLVDSLVGAVD 96 (109)
T ss_dssp ETTEEEEEEESCCC
T ss_pred cCCcEEEeeeccCC
Confidence 999754 4778765
No 79
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.63 E-value=2.2e-15 Score=115.70 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=82.5
Q ss_pred ccCceeecC-HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 85 IKNEIEEVN-RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 85 ~~~~v~~l~-~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
++..+.+++ .++++++++++++++|.||++||++|+.+.|.|.++++.+.+ +.++.+| ++.++++|+|.++||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~~Pt~ 87 (114)
T 2oe3_A 10 SYTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTAMPTF 87 (114)
T ss_dssp CGGGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSBSEE
T ss_pred chhheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCcccEE
Confidence 344666665 678889999999999999999999999999999999998765 6666665 6789999999999999
Q ss_pred EEEecCCc-ceecCCcchhHHHHHHHhh
Q psy160 161 VYFRHRFP-SIYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 161 ~~~~~g~~-~~y~g~~~~~~~i~~fi~~ 187 (346)
++|++|+. ..+.|.. .+ .|.+++++
T Consensus 88 ~~~~~G~~~~~~~G~~-~~-~l~~~l~~ 113 (114)
T 2oe3_A 88 VLGKDGQLIGKIIGAN-PT-ALEKGIKD 113 (114)
T ss_dssp EEEETTEEEEEEESSC-HH-HHHHHHHT
T ss_pred EEEeCCeEEEEEeCCC-HH-HHHHHHHh
Confidence 99998884 4588877 34 88888864
No 80
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.63 E-value=2.3e-14 Score=125.78 Aligned_cols=214 Identities=9% Similarity=0.137 Sum_probs=151.6
Q ss_pred ceeec-CHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCCCcceEEEEecC
Q psy160 88 EIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRHR 166 (346)
Q Consensus 88 ~v~~l-~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~~~Ptl~~~~~g 166 (346)
.+.+| +.+.+++++.+++.++|.|+++||. ...+.|.++|..++.. +.|+.+.+..++++|++.+ |+|++|+.+
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~---~~~~~f~~~A~~lr~~-~~F~~~~~~~v~~~~~~~~-p~i~~fk~~ 81 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDSFS---EAHSEFLKAASNLRDN-YRFAHTNVESLVNEYDDNG-EGIILFRPS 81 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCTTS---HHHHHHHHHHHHTTTT-SCEEEECCHHHHHHHCSSS-EEEEEECCG
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCCCC---hHHHHHHHHHHhcccC-cEEEEEChHHHHHHhCCCC-CcEEEEcch
Confidence 78888 4788999999889999999999854 5678999999998543 8898888899999999997 999999853
Q ss_pred --------Cccee-cCCcchhHHHHHHHhhccccCcEEEccHHHHHHHHhccceEEEEEEcCCChh----hHHHHHHHHH
Q psy160 167 --------FPSIY-RGDLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKLNCNI----CDQILEGLEK 233 (346)
Q Consensus 167 --------~~~~y-~g~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~----c~~~~~~~~~ 233 (346)
....| +|.++ .++|.+|+..+..| .|..+|.+++.++ .+.+++|.|+...+.. ...+...+.+
T Consensus 82 ~~~~kf~e~~~~y~~g~~~-~~~l~~fi~~~~~P-lv~e~t~~n~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 157 (252)
T 2h8l_A 82 HLTNKFEDKTVAYTEQKMT-SGKIKKFIQENIFG-ICPHMTEDNKDLI--QGKDLLIAYYDVDYEKNAKGSNYWRNRVMM 157 (252)
T ss_dssp GGCCTTSCSEEECCCSSCC-HHHHHHHHHHHSSC-SSCEECTTTHHHH--SSSSEEEEEECCBTTTBHHHHHHHHHHHHH
T ss_pred hhcccccccccccCCCCcC-HHHHHHHHHhcccC-CeeecccccHhhh--cCCCeEEEEeecchhhcchhHHHHHHHHHH
Confidence 35679 99886 55999999999987 6679999998886 3446677777543321 1257788889
Q ss_pred HHhhcCcC--ceEEEEE---cChhhhhhCCC----ccccEEEEEeC-CeEEEeecCccccccchhhhhhhccC-CCCCCc
Q psy160 234 VDDECDIY--GIHMVKI---QDPQLAKRYSI----KTFPALVYFRN-GNPLIFEGENKILKGTYIGTYISTKA-FSLIPF 302 (346)
Q Consensus 234 la~~~~~~--~i~~~~i---~~~~~~~~~~i----~~~Pti~~~~~-g~~~~y~g~~~~~~~~~~~~~i~~~~-~~~~~~ 302 (346)
+|+++++. .+.|+.+ ....+.+.||+ ..+|+++++.. ++...+.+..+.+. ..|..|++.-. ..+-|.
T Consensus 158 vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~-~~i~~F~~~~~~Gkl~~~ 236 (252)
T 2h8l_A 158 VAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDG-KALERFLQDYFDGNLKRY 236 (252)
T ss_dssp HHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTS-HHHHHHHHHHHHTCSCCC
T ss_pred HHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcch-HHHHHHHHHHHCCCcccc
Confidence 99999851 2888888 45567888999 36899999853 44444555444221 11555555432 233355
Q ss_pred ccCCCCCCc
Q psy160 303 CFSEKHPGA 311 (346)
Q Consensus 303 ~~~~~~~~~ 311 (346)
+.++..|+.
T Consensus 237 ~kSe~iPe~ 245 (252)
T 2h8l_A 237 LKSEPIPES 245 (252)
T ss_dssp C--------
T ss_pred ccCCCCCCC
Confidence 556655544
No 81
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.63 E-value=2.5e-15 Score=117.42 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=83.3
Q ss_pred CceeecCH-HHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNR-RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~-~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
.-+.++++ ++|++.+.++++++|.||++||++|+.+.|.|.++++.+. ++.++.+| +++++++|+|.++||+++
T Consensus 19 ~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 19 PSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp SCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 35788887 9999999888999999999999999999999999999874 37777665 778999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.| .+ .++|.+++.+.
T Consensus 97 ~~~G~~~~~~~G-~~-~~~l~~~l~~~ 121 (125)
T 1r26_A 97 ARSGKMLGHVIG-AN-PGMLRQKLRDI 121 (125)
T ss_dssp EETTEEEEEEES-SC-HHHHHHHHHHH
T ss_pred EeCCeEEEEEeC-CC-HHHHHHHHHHH
Confidence 998884 45788 45 34888888764
No 82
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.63 E-value=2.4e-15 Score=114.84 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=83.8
Q ss_pred CceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.|..++.++|++.+ +++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.++ ++.++++|+|.++||+++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 83 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDENPGTAAKYGVMSIPTLNV 83 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCCHHHHHhCCCCcccEEEE
Confidence 367889999998765 5568999999999999999999999999998854 36777665 778999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.|..+.+ .+.+++.+.
T Consensus 84 ~~~G~~~~~~~G~~~~~-~l~~~l~~~ 109 (112)
T 1t00_A 84 YQGGEVAKTIVGAKPKA-AIVRDLEDF 109 (112)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHTHHH
T ss_pred EeCCEEEEEEeCCCCHH-HHHHHHHHH
Confidence 998884 4588988744 898888764
No 83
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.8e-16 Score=125.98 Aligned_cols=102 Identities=15% Similarity=0.224 Sum_probs=85.8
Q ss_pred cCceeecCHHHHHHHHhcCC--cEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCC-----
Q psy160 86 KNEIEEVNRRMLDKLLEENE--FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVT----- 155 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~--~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~----- 155 (346)
++.+..++.++|++.+.+++ +++|+||++||++|+.+.|.|+++++.+.+.++.++.+| ++.++++|+|.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 35788999999999987765 899999999999999999999999999865458888887 77899999999
Q ss_pred -CcceEEEEecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 156 -KLPAVVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 156 -~~Ptl~~~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++||+++|++|+. ..+.|..+.+ .+.+|+.+.
T Consensus 86 ~~~Pt~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~ 119 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAMRRPQIDKKG-RAVSWTFSE 119 (137)
T ss_dssp SCSSEEEEESSSSEEEEESCBCSSS-CBCCCCCCH
T ss_pred CCCCEEEEEECCEEEEEecCcCchH-HHHHHHhcc
Confidence 9999999999884 4578877644 566666544
No 84
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.62 E-value=2.5e-15 Score=114.62 Aligned_cols=100 Identities=13% Similarity=0.242 Sum_probs=81.3
Q ss_pred ceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEe
Q psy160 88 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 164 (346)
.+..++.++| +.+.++++++|.||++||++|+.+.|.++++++.+.+ +.++.+| ++.++++|+|.++||+++|+
T Consensus 4 ~~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 80 (110)
T 2l6c_A 4 IRDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQ--VAISSVDSEARPELMKELGFERVPTLVFIR 80 (110)
T ss_dssp CSBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTT--SCEEEEEGGGCHHHHHHTTCCSSCEEEEEE
T ss_pred eeecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCC--cEEEEEcCcCCHHHHHHcCCcccCEEEEEE
Confidence 4566788999 6677788999999999999999999999999988754 5555544 77899999999999999999
Q ss_pred cCCc-ceecCCcchhHHHHHHHhhcccc
Q psy160 165 HRFP-SIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 165 ~g~~-~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
+|+. .++.|..+.+ +|.+++.....+
T Consensus 81 ~G~~v~~~~G~~~~~-~l~~~~~~~~~~ 107 (110)
T 2l6c_A 81 DGKVAKVFSGIMNPR-ELQALYASIHHH 107 (110)
T ss_dssp SSSEEEEEESCCCHH-HHHHHHHTC---
T ss_pred CCEEEEEEcCCCCHH-HHHHHHHHHhhh
Confidence 8984 4588987744 899998876543
No 85
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.62 E-value=2.4e-15 Score=128.36 Aligned_cols=105 Identities=22% Similarity=0.331 Sum_probs=91.9
Q ss_pred ccCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEE
Q psy160 85 IKNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 161 (346)
Q Consensus 85 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~ 161 (346)
....+..++.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+ .+.++.+| ++.+|++|+|.++||++
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 173 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRMLCRMKGVNSYPSLF 173 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHHHHHHcCCCcCCeEE
Confidence 345789999999999998899999999999999999999999999999855 37777765 77899999999999999
Q ss_pred EEecCC-cceecCCcchhHHHHHHHhhcccc
Q psy160 162 YFRHRF-PSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 162 ~~~~g~-~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
+|++|+ ...|.|..+.+ +|.+|+.+...+
T Consensus 174 ~~~~G~~~~~~~G~~~~~-~l~~~i~~~l~~ 203 (210)
T 3apq_A 174 IFRSGMAAVKYNGDRSKE-SLVAFAMQHVRS 203 (210)
T ss_dssp EECTTSCCEECCSCCCHH-HHHHHHHHHHHC
T ss_pred EEECCCceeEecCCCCHH-HHHHHHHHhCcc
Confidence 999888 56689988744 899999987655
No 86
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.62 E-value=4.5e-15 Score=115.15 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=84.2
Q ss_pred CceeecCHHHHHHHHhc----CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcce
Q psy160 87 NEIEEVNRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 159 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~~~----~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Pt 159 (346)
..+..++.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+.+ +.++.+| ++.++++|+|.++||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt 90 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELKPIAEQFSVEAMPT 90 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCHHHHHHcCCCcccE
Confidence 36788899999998864 78999999999999999999999999998765 6666665 678999999999999
Q ss_pred EEEEecCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 160 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 160 l~~~~~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
+++|++|+. ..+.|.. .+ .+.+|+.+..
T Consensus 91 ~~~~~~G~~~~~~~G~~-~~-~l~~~l~~~l 119 (122)
T 2vlu_A 91 FLFMKEGDVKDRVVGAI-KE-ELTAKVGLHA 119 (122)
T ss_dssp EEEEETTEEEEEEESSC-HH-HHHHHHHHHH
T ss_pred EEEEeCCEEEEEEeCcC-HH-HHHHHHHHHh
Confidence 999998884 4588887 34 8999987654
No 87
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.62 E-value=3.1e-15 Score=113.31 Aligned_cols=96 Identities=11% Similarity=0.214 Sum_probs=79.5
Q ss_pred eeec-CHHHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 89 IEEV-NRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 89 v~~l-~~~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.++ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+. ++.++.+| +++++++|+|.++||+++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 80 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQCQGTAATNNISATPTFQF 80 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHhcCCCcccEEEE
Confidence 4455 6799999984 57899999999999999999999999999884 37777665 678999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.|... . +|.+|+.+.
T Consensus 81 ~~~G~~~~~~~G~~~-~-~l~~~l~~~ 105 (107)
T 1gh2_A 81 FRNKVRIDQYQGADA-V-GLEEKIKQH 105 (107)
T ss_dssp EETTEEEEEEESSCH-H-HHHHHHHHH
T ss_pred EECCeEEEEEeCCCH-H-HHHHHHHHh
Confidence 998884 45788544 4 588888764
No 88
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=1.4e-15 Score=121.10 Aligned_cols=100 Identities=17% Similarity=0.372 Sum_probs=85.5
Q ss_pred CcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcC--ceEEEEE---cChhhhhhCCCccccEEE
Q psy160 192 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIY--GIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~--~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
..+..++.++|++.++++++++|.||++||++|+.+.|.|.++++.+.+. .+.++.+ .+.+++++|+|.++||++
T Consensus 17 ~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 96 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIK 96 (140)
T ss_dssp TTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEE
T ss_pred CCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEE
Confidence 46778999999999888999999999999999999999999999998652 3889888 578899999999999999
Q ss_pred EEeCCeEEEeecCccccccchhhhhhhc
Q psy160 267 YFRNGNPLIFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 267 ~~~~g~~~~y~g~~~~~~~~~~~~~i~~ 294 (346)
+|++|+...|.|.++.+. +..+++.
T Consensus 97 ~~~~G~~~~~~g~~~~~~---l~~~l~~ 121 (140)
T 2dj1_A 97 ILKKGQAVDYDGSRTQEE---IVAKVRE 121 (140)
T ss_dssp EEETTEEEECCSCCCHHH---HHHHHHH
T ss_pred EEECCcEEEcCCCCCHHH---HHHHHHH
Confidence 999999778888876333 5555554
No 89
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.62 E-value=1.3e-15 Score=119.60 Aligned_cols=100 Identities=19% Similarity=0.326 Sum_probs=84.2
Q ss_pred CceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.+.+++.++|++.+ .++++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+| ++.++++|+|.++||+++
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 100 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLL 100 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTCCTTSGGGTCCSSSEEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 357889999999765 5678999999999999999999999999998854 37777765 678999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.|..+.+ +|.+|+++.
T Consensus 101 ~~~G~~~~~~~G~~~~~-~l~~~l~~~ 126 (128)
T 2o8v_B 101 FKNGEVAATKVGALSKG-QLKEFLDAN 126 (128)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHHHHH
T ss_pred EeCCEEEEEEcCCCCHH-HHHHHHHHh
Confidence 988884 4588988744 899998764
No 90
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.62 E-value=5e-15 Score=111.64 Aligned_cols=97 Identities=13% Similarity=0.278 Sum_probs=80.6
Q ss_pred eeecCH-HHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 89 IEEVNR-RMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 89 v~~l~~-~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
+.++++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+.. ++.++.++ ++.++++|+|.++||+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDECEDIAMEYNISSMPTFVF 80 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccchHHHHHHcCCCcccEEEE
Confidence 456776 99999887 678999999999999999999999999998742 47777665 678999999999999999
Q ss_pred EecCC-cceecCCcchhHHHHHHHhhc
Q psy160 163 FRHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
|++|+ ...+.| .+ .+.+.+++.+.
T Consensus 81 ~~~G~~~~~~~g-~~-~~~l~~~i~~~ 105 (106)
T 1xwb_A 81 LKNGVKVEEFAG-AN-AKRLEDVIKAN 105 (106)
T ss_dssp EETTEEEEEEES-CC-HHHHHHHHHHT
T ss_pred EcCCcEEEEEcC-CC-HHHHHHHHHHh
Confidence 99888 445788 55 34788888753
No 91
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.62 E-value=4.8e-15 Score=111.61 Aligned_cols=95 Identities=14% Similarity=0.246 Sum_probs=80.2
Q ss_pred eec-CHHHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEE
Q psy160 90 EEV-NRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 90 ~~l-~~~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~ 163 (346)
.++ +.+++++.+. ++++++|.||++||++|+.+.|.++++++.+.+ +.++.+| .+.++++|+|.++||+++|
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASESEVKSMPTFQFF 80 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTCHHHHHHTTCCBSSEEEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhhHHHHHHcCCCcCcEEEEE
Confidence 344 5789999998 678999999999999999999999999998865 6666665 7789999999999999999
Q ss_pred ecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 164 RHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 164 ~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++|+. ..+.|. + .+++.+++.+.
T Consensus 81 ~~g~~~~~~~g~-~-~~~l~~~l~~~ 104 (105)
T 3m9j_A 81 KKGQKVGEFSGA-N-KEKLEATINEL 104 (105)
T ss_dssp ETTEEEEEEESS-C-HHHHHHHHHHH
T ss_pred ECCeEEEEEeCC-C-HHHHHHHHHHh
Confidence 98884 458888 5 44899988753
No 92
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.62 E-value=2.4e-15 Score=119.86 Aligned_cols=89 Identities=19% Similarity=0.372 Sum_probs=79.8
Q ss_pred CcEEEccHHHHH-HHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 192 DRIELITRVMLE-TMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 192 ~~v~~l~~~~~~-~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
..+..++.++|+ .+++++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+ .+++++++|+|+++||+++
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 467899999999 4677889999999999999999999999999999986 6888888 6789999999999999999
Q ss_pred EeCCeEE-EeecCcc
Q psy160 268 FRNGNPL-IFEGENK 281 (346)
Q Consensus 268 ~~~g~~~-~y~g~~~ 281 (346)
|++|+.+ .|.|..+
T Consensus 85 ~~~G~~~~~~~G~~~ 99 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIY 99 (140)
T ss_dssp EETTEEEEEEESSCC
T ss_pred EeCCcEEEEEcCCCC
Confidence 9999865 5788765
No 93
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.61 E-value=4.5e-15 Score=114.33 Aligned_cols=96 Identities=23% Similarity=0.305 Sum_probs=80.9
Q ss_pred ceeecCH-HHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEE
Q psy160 88 EIEEVNR-RMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 161 (346)
Q Consensus 88 ~v~~l~~-~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~ 161 (346)
.+.++++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+ ++.++.+| ++.++++|+|.++||++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 90 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISAMPTFI 90 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCccceEE
Confidence 4778887 99999988 6789999999999999999999999999887 47777665 67899999999999999
Q ss_pred EEecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 162 YFRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 162 ~~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
+|++|+. ..+.| .+ .+++.+++++.
T Consensus 91 ~~~~G~~~~~~~G-~~-~~~l~~~l~~~ 116 (117)
T 2xc2_A 91 AIKNGEKVGDVVG-AS-IAKVEDMIKKF 116 (117)
T ss_dssp EEETTEEEEEEES-SC-HHHHHHHHHHH
T ss_pred EEeCCcEEEEEeC-CC-HHHHHHHHHHh
Confidence 9998884 45778 44 34788888753
No 94
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.61 E-value=3.7e-15 Score=112.27 Aligned_cols=87 Identities=18% Similarity=0.419 Sum_probs=77.0
Q ss_pred EEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeC
Q psy160 194 IELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 194 v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~ 270 (346)
+..++.++|+++++++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|.++||++++++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 80 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDENPETTSQFGIMSIPTLILFKG 80 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCCHHHHHHcCCccccEEEEEeC
Confidence 45788899998888889999999999999999999999999999876 6888888 5788999999999999999999
Q ss_pred CeEE-EeecCcc
Q psy160 271 GNPL-IFEGENK 281 (346)
Q Consensus 271 g~~~-~y~g~~~ 281 (346)
|+.+ .+.|..+
T Consensus 81 G~~~~~~~G~~~ 92 (105)
T 1nsw_A 81 GRPVKQLIGYQP 92 (105)
T ss_dssp TEEEEEEESCCC
T ss_pred CeEEEEEecCCC
Confidence 9854 4778765
No 95
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.61 E-value=5e-15 Score=115.26 Aligned_cols=99 Identities=14% Similarity=0.243 Sum_probs=82.9
Q ss_pred cCceeecCHHHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC----ChhhHHhhCCCCcce
Q psy160 86 KNEIEEVNRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----DPRYARKWGVTKLPA 159 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~----~~~l~~~~~i~~~Pt 159 (346)
.+.+.+++.++|++.+. ++++++|.||++||++|+++.|.++++++.+.+ +.++.+| +++++++|+|+++||
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcchHHHHHHcCCCeeeE
Confidence 34789999999999887 568999999999999999999999999998764 6666554 578999999999999
Q ss_pred EEEEecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 160 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 160 l~~~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++++++|+. ..+.|.. .+++.+++.+.
T Consensus 95 ~~~~~~G~~~~~~~G~~--~~~l~~~i~~~ 122 (124)
T 1faa_A 95 FKILKENSVVGEVTGAK--YDKLLEAIQAA 122 (124)
T ss_dssp EEEEETTEEEEEEESSC--HHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCC--HHHHHHHHHHh
Confidence 999999984 4577875 34788888764
No 96
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.61 E-value=4e-15 Score=113.17 Aligned_cols=98 Identities=15% Similarity=0.403 Sum_probs=81.6
Q ss_pred CcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcC--ceEEEEE---cChhhhhhCCCccccEEE
Q psy160 192 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIY--GIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~--~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
+.+..++.++|++.+. +++++|.||++||++|+.+.|.+.++++.+... .+.++.+ .+++++++|+|+++||++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEE
Confidence 4677899999999887 779999999999999999999999999987532 5888888 678899999999999999
Q ss_pred EEeCCeEE-EeecCccccccchhhhhhh
Q psy160 267 YFRNGNPL-IFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 267 ~~~~g~~~-~y~g~~~~~~~~~~~~~i~ 293 (346)
+|++|+.+ .+.|..+.+. +..+++
T Consensus 84 ~~~~g~~~~~~~g~~~~~~---l~~~l~ 108 (111)
T 3uvt_A 84 LFRGGKKVSEHSGGRDLDS---LHRFVL 108 (111)
T ss_dssp EEETTEEEEEECSCCSHHH---HHHHHH
T ss_pred EEeCCcEEEeccCCcCHHH---HHHHHH
Confidence 99999854 6778765332 555554
No 97
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.61 E-value=6.1e-15 Score=110.77 Aligned_cols=95 Identities=18% Similarity=0.357 Sum_probs=79.1
Q ss_pred eecCH-HHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEE
Q psy160 90 EEVNR-RMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 90 ~~l~~-~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~ 163 (346)
.++++ ++|++.+. ++++++|.||++||++|+.+.|.+.++++.+. ++.++.++ ++.++++|+|.++||+++|
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTAMPTFVFI 79 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCccccEEEEE
Confidence 45665 99999988 67899999999999999999999999999875 46777665 6789999999999999999
Q ss_pred ecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 164 RHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 164 ~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++|+. ..+.| .+ .+++.+++.+.
T Consensus 80 ~~g~~~~~~~G-~~-~~~l~~~l~~~ 103 (104)
T 2vim_A 80 KDGKEVDRFSG-AN-ETKLRETITRH 103 (104)
T ss_dssp ETTEEEEEEES-SC-HHHHHHHHHHH
T ss_pred eCCcEEEEEeC-CC-HHHHHHHHHhh
Confidence 98884 45778 45 44798888753
No 98
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.61 E-value=3.4e-15 Score=114.17 Aligned_cols=97 Identities=19% Similarity=0.294 Sum_probs=82.2
Q ss_pred EEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeC
Q psy160 194 IELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 194 v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~ 270 (346)
+..++.++|++.+ ++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+ .+.+++++|+|.++||+++|++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 80 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQETAGKYGVMSIPTLLVLKD 80 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTCCSHHHHTTCCSBSEEEEEET
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCCcccEEEEEeC
Confidence 4578899999988 888999999999999999999999999999986 7888888 5778999999999999999999
Q ss_pred CeEE-EeecCccccccchhhhhhhcc
Q psy160 271 GNPL-IFEGENKILKGTYIGTYISTK 295 (346)
Q Consensus 271 g~~~-~y~g~~~~~~~~~~~~~i~~~ 295 (346)
|+.+ .+.|..+.+. +..++...
T Consensus 81 G~~~~~~~G~~~~~~---l~~~l~~~ 103 (112)
T 2voc_A 81 GEVVETSVGFKPKEA---LQELVNKH 103 (112)
T ss_dssp TEEEEEEESCCCHHH---HHHHHHTT
T ss_pred CEEEEEEeCCCCHHH---HHHHHHHH
Confidence 9854 5788876333 55666543
No 99
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.61 E-value=3.6e-15 Score=118.15 Aligned_cols=102 Identities=13% Similarity=0.102 Sum_probs=84.0
Q ss_pred cCceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe---------C-ChhhHHhhCCC
Q psy160 86 KNEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM---------A-DPRYARKWGVT 155 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~---------~-~~~l~~~~~i~ 155 (346)
++.+..++.++|++.+.+ +++|.||++||++|+.+.|.|.++++.+. ..+..+.+ + .+.++++|+|.
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 347889999999999877 99999999999999999999999999875 44555555 3 56799999999
Q ss_pred CcceEEEEecCC-cceecCCcchhHHHHHHHhhcccc
Q psy160 156 KLPAVVYFRHRF-PSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 156 ~~Ptl~~~~~g~-~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
++||+++|++|+ ...+.|....+ .+.+++++...+
T Consensus 92 ~~Pt~~~~~~G~~v~~~~G~~~~~-~~~~~i~~~~~~ 127 (135)
T 3emx_A 92 GTPTLVFYKEGRIVDKLVGATPWS-LKVEKAREIYGG 127 (135)
T ss_dssp SSSEEEEEETTEEEEEEESCCCHH-HHHHHHHHHC--
T ss_pred eeCeEEEEcCCEEEEEEeCCCCHH-HHHHHHHHHhCC
Confidence 999999999988 44588988744 788888776543
No 100
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.61 E-value=3.9e-15 Score=112.02 Aligned_cols=97 Identities=14% Similarity=0.268 Sum_probs=81.4
Q ss_pred eeecCHHHHHHHHh-cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEe
Q psy160 89 IEEVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 89 v~~l~~~~~~~~~~-~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 164 (346)
|..++.++|++.+. ++++++|+||++||++|+.+.|.+.++++.+.+ ++.++.++ ++.++++|+|.++||+++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 80 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchHHHHHhCCCCcccEEEEEe
Confidence 56789999998764 568999999999999999999999999998854 36777664 67899999999999999999
Q ss_pred cCCc-ceecCCcchhHHHHHHHhh
Q psy160 165 HRFP-SIYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 165 ~g~~-~~y~g~~~~~~~i~~fi~~ 187 (346)
+|+. ..+.|..+.+ .+.+++.+
T Consensus 81 ~g~~~~~~~G~~~~~-~l~~~l~~ 103 (105)
T 1fb6_A 81 NGERKESIIGAVPKS-TLTDSIEK 103 (105)
T ss_dssp TTEEEEEEEECCCHH-HHHHHHHH
T ss_pred CCeEEEEEecCCCHH-HHHHHHHh
Confidence 8884 4578887744 78888865
No 101
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.61 E-value=3.9e-15 Score=128.24 Aligned_cols=105 Identities=19% Similarity=0.311 Sum_probs=89.7
Q ss_pred cccCceeecCHHHHHHH-HhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcce
Q psy160 84 EIKNEIEEVNRRMLDKL-LEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 159 (346)
Q Consensus 84 ~~~~~v~~l~~~~~~~~-~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Pt 159 (346)
..+..+..+|.++|++. +.++++++|.||++||++|+.+.|.|.++++.+.+. +.++.++ ++.++++|+|.++||
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRGIPT 87 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCTTTGGGGTCCSBSE
T ss_pred CCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCHHHHHHcCCCcCCE
Confidence 45678999999999884 567789999999999999999999999999998653 6676665 678999999999999
Q ss_pred EEEEecCCc-ceecCCcchhHHHHHHHhhccc
Q psy160 160 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 160 l~~~~~g~~-~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
+++|++|+. ..+.|..+.+ .+.+|+.+...
T Consensus 88 ~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~l~ 118 (222)
T 3dxb_A 88 LLLFKNGEVAATKVGALSKG-QLKEFLDANLA 118 (222)
T ss_dssp EEEEETTEEEEEEESCCCHH-HHHHHHHHHSC
T ss_pred EEEEECCeEEEEeccccChH-HHHHHHHhhcc
Confidence 999999884 4688988744 89999988654
No 102
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.61 E-value=5.4e-15 Score=111.92 Aligned_cols=98 Identities=20% Similarity=0.422 Sum_probs=82.7
Q ss_pred cEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEe
Q psy160 193 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~ 269 (346)
.+..++.++|+++++++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|.++|++++|+
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 356889999998888899999999999999999999999999999886 6888888 578899999999999999999
Q ss_pred CCeEE-EeecCccccccchhhhhhhc
Q psy160 270 NGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 270 ~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
+|+.+ .+.|..+.+. +..+++.
T Consensus 81 ~g~~~~~~~g~~~~~~---l~~~l~~ 103 (109)
T 2yzu_A 81 DGQPVEVLVGAQPKRN---YQAKIEK 103 (109)
T ss_dssp TTEEEEEEESCCCHHH---HHHHHHT
T ss_pred CCcEeeeEeCCCCHHH---HHHHHHH
Confidence 99864 4778765322 5555543
No 103
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.60 E-value=4.5e-15 Score=111.91 Aligned_cols=96 Identities=22% Similarity=0.448 Sum_probs=81.2
Q ss_pred cEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEe
Q psy160 193 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~ 269 (346)
.+..++.++|++.+ ++++++|.||++||++|+.+.|.++++++.+.+ .+.++.+ .+++++++|+|+++||+++|+
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEG-KADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 46688999999988 889999999999999999999999999999986 6888888 678899999999999999999
Q ss_pred CCeEE-EeecCccccccchhhhhhh
Q psy160 270 NGNPL-IFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 270 ~g~~~-~y~g~~~~~~~~~~~~~i~ 293 (346)
+|+.+ .+.|..+.+. +..+++
T Consensus 82 ~G~~~~~~~g~~~~~~---l~~~l~ 103 (106)
T 3die_A 82 DGQPVDKVVGFQPKEN---LAEVLD 103 (106)
T ss_dssp TTEEEEEEESCCCHHH---HHHHHH
T ss_pred CCeEEEEEeCCCCHHH---HHHHHH
Confidence 99754 5778765322 445444
No 104
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.60 E-value=5.7e-15 Score=114.27 Aligned_cols=101 Identities=24% Similarity=0.301 Sum_probs=85.3
Q ss_pred CceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEE
Q psy160 87 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~ 162 (346)
..+..++.++|++.+ .++++++|.||++||++|+.+.|.++++++.+.+ ++.++.++ ++.++++|+|.++||+++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 90 (121)
T 2i1u_A 12 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPETARNFQVVSIPTLIL 90 (121)
T ss_dssp CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhcCCCcCCEEEE
Confidence 478899999998755 5678999999999999999999999999998854 37777665 778999999999999999
Q ss_pred EecCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 163 FRHRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 163 ~~~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
|++|+. ..+.|..+.+ .+.+++.+..
T Consensus 91 ~~~g~~~~~~~G~~~~~-~l~~~l~~~l 117 (121)
T 2i1u_A 91 FKDGQPVKRIVGAKGKA-ALLRELSDVV 117 (121)
T ss_dssp EETTEEEEEEESCCCHH-HHHHHTCSCC
T ss_pred EECCEEEEEecCCCCHH-HHHHHHHHHH
Confidence 998884 4588988744 8999987654
No 105
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.60 E-value=3.9e-15 Score=114.67 Aligned_cols=86 Identities=13% Similarity=0.342 Sum_probs=75.7
Q ss_pred CcEEEccHHHHHHHHh--ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 192 DRIELITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~--~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
......+.++|+++++ .+++++|.||++||++|+.+.|.++++++.+.+ +.|+.+ .+++++++|+|.++||++
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 89 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKSMPTFQ 89 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCccccEEE
Confidence 4556778999999887 789999999999999999999999999999874 888888 678999999999999999
Q ss_pred EEeCCeEE-EeecC
Q psy160 267 YFRNGNPL-IFEGE 279 (346)
Q Consensus 267 ~~~~g~~~-~y~g~ 279 (346)
+|++|+.+ .+.|.
T Consensus 90 ~~~~G~~~~~~~G~ 103 (116)
T 3qfa_C 90 FFKKGQKVGEFSGA 103 (116)
T ss_dssp EESSSSEEEEEESC
T ss_pred EEeCCeEEEEEcCC
Confidence 99999754 46676
No 106
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.60 E-value=1.3e-15 Score=118.06 Aligned_cols=102 Identities=11% Similarity=0.257 Sum_probs=84.7
Q ss_pred cCceeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccC----CCcEEEEeC--ChhhHHhhCCCCcc
Q psy160 86 KNEIEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDN----MDITFVKMA--DPRYARKWGVTKLP 158 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~----~~i~~~~~~--~~~l~~~~~i~~~P 158 (346)
.+.+.+++.++|++.+ .++++++|+||++||++|+.+.|.|+++++.+.+ .++.++.+| ...+++ +|.++|
T Consensus 6 ~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~--~v~~~P 83 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD--EIQGFP 83 (121)
T ss_dssp SCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS--CCSSSS
T ss_pred CCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc--ccCcCC
Confidence 4578999999999886 5678999999999999999999999999999854 257777776 334665 999999
Q ss_pred eEEEEecC-C--cceecCCcchhHHHHHHHhhccc
Q psy160 159 AVVYFRHR-F--PSIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 159 tl~~~~~g-~--~~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
|+++|.+| + ...|.|.++.+ +|.+|+.+...
T Consensus 84 t~~~~~~~~~~~~~~~~G~~~~~-~l~~~i~~~~~ 117 (121)
T 2djj_A 84 TIKLYPAGAKGQPVTYSGSRTVE-DLIKFIAENGK 117 (121)
T ss_dssp EEEEECSSCTTSCCCCCCCSCHH-HHHHHHHHTSS
T ss_pred eEEEEeCcCCCCceEecCCCCHH-HHHHHHHhccC
Confidence 99999886 4 56799988744 89999987653
No 107
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.60 E-value=6.7e-15 Score=111.45 Aligned_cols=88 Identities=26% Similarity=0.436 Sum_probs=77.0
Q ss_pred cEEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEE
Q psy160 193 RIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 268 (346)
Q Consensus 193 ~v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~ 268 (346)
.+..++.++|++. ++++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|.++||+++|
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 5678899999864 56788999999999999999999999999999886 6888888 57889999999999999999
Q ss_pred eCCeEE-EeecCcc
Q psy160 269 RNGNPL-IFEGENK 281 (346)
Q Consensus 269 ~~g~~~-~y~g~~~ 281 (346)
++|+.+ .+.|..+
T Consensus 82 ~~G~~~~~~~G~~~ 95 (108)
T 2trx_A 82 KNGEVAATKVGALS 95 (108)
T ss_dssp ETTEEEEEEESCCC
T ss_pred eCCEEEEEEecCCC
Confidence 999854 4677765
No 108
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.60 E-value=3.6e-15 Score=114.96 Aligned_cols=99 Identities=16% Similarity=0.231 Sum_probs=78.1
Q ss_pred CceeecCHHHHHHHHhcC-C--cEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCCCcceEEEE
Q psy160 87 NEIEEVNRRMLDKLLEEN-E--FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~~~~-~--~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~~~Ptl~~~ 163 (346)
+.+.+++.++|.+.+.++ + +++|.||++||++|+.+.|.++++|+++. ++.|+++|-.+.+.+|+|++.||+++|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~~~~~~v~~~PT~~~f 80 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSCIQHYHDNCLPTIFVY 80 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGTSTTCCGGGCSEEEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHhHHHCCCCCCCEEEEE
Confidence 367889999999877554 3 79999999999999999999999999875 388888885566899999999999999
Q ss_pred ecCCcc-eecCCcc------hhHHHHHHHhh
Q psy160 164 RHRFPS-IYRGDLS------EEEEVLQWLIT 187 (346)
Q Consensus 164 ~~g~~~-~y~g~~~------~~~~i~~fi~~ 187 (346)
++|+.+ ++.|... +.+++..++.+
T Consensus 81 k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 81 KNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp ETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred ECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999843 3555432 23355555544
No 109
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.59 E-value=6.3e-15 Score=127.63 Aligned_cols=98 Identities=16% Similarity=0.322 Sum_probs=87.7
Q ss_pred CceeecCHHHHHHHHhcCCcEEEEEEC--CCChhHHHHHHHHHHHHhhccC-CCcEEEEeC--------ChhhHHhhCCC
Q psy160 87 NEIEEVNRRMLDKLLEENEFVTVFFYE--TDHKDSVKVLERLEKIDGETDN-MDITFVKMA--------DPRYARKWGVT 155 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~~~~~~~lv~F~~--~~C~~c~~~~~~~~~~a~~~~~-~~i~~~~~~--------~~~l~~~~~i~ 155 (346)
+.|.+|++++|++++.++++|+|.||+ |||+ +.|.|+++++.+.+ .++.|+.+| ++++|++|+|+
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 468899999999999888999999999 9999 99999999999853 458899888 68899999999
Q ss_pred --CcceEEEEecCC---cceecCCcchhHHHHHHHhhcc
Q psy160 156 --KLPAVVYFRHRF---PSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 156 --~~Ptl~~~~~g~---~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
++||+++|++|+ +..|.|.++.+ .|.+|+.+..
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~-~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVG-AIQRWLKGQG 118 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHH-HHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHH-HHHHHHHHhc
Confidence 999999999987 67899998854 9999999874
No 110
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.59 E-value=7.5e-15 Score=119.16 Aligned_cols=99 Identities=20% Similarity=0.354 Sum_probs=83.4
Q ss_pred CcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEE
Q psy160 192 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 268 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~ 268 (346)
..+..++.++|++.++++++++|.||++||++|+.+.|.|+++++++.+ ++.|+.+ .+++++++|+|+++||+++|
T Consensus 47 ~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 125 (155)
T 2ppt_A 47 GKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHPAVAGRHRIQGIPAFILF 125 (155)
T ss_dssp SSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTSTHHHHHTTCCSSSEEEEE
T ss_pred CCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccHHHHHHcCCCcCCEEEEE
Confidence 4567889999999887788999999999999999999999999999986 6899988 57889999999999999999
Q ss_pred eCCeEE-EeecCccccccchhhhhhhc
Q psy160 269 RNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 269 ~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
++|+.+ .+.|..+.+. +..|++.
T Consensus 126 ~~G~~~~~~~G~~~~~~---l~~~l~~ 149 (155)
T 2ppt_A 126 HKGRELARAAGARPASE---LVGFVRG 149 (155)
T ss_dssp ETTEEEEEEESCCCHHH---HHHHHHH
T ss_pred eCCeEEEEecCCCCHHH---HHHHHHH
Confidence 999864 4778765322 5555543
No 111
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.59 E-value=5e-15 Score=121.71 Aligned_cols=81 Identities=16% Similarity=0.303 Sum_probs=72.2
Q ss_pred cCcEEEccHHHHHHHHhc--cceEEEEEEc-------CCChhhHHHHHHHHHHHhhcC-----cCceEEEEE---cChhh
Q psy160 191 EDRIELITRVMLETMVEE--TQYLAVYFYK-------LNCNICDQILEGLEKVDDECD-----IYGIHMVKI---QDPQL 253 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~--~~~~lv~F~~-------~~c~~c~~~~~~~~~la~~~~-----~~~i~~~~i---~~~~~ 253 (346)
++.+..+|.++|++++.. +.+++|+||| +||++|+.+.|.|+++|+.+. + ++.|+++ +++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~-~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS-LNLFFTVDVNEVPQL 95 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEEETTTCHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC-CEEEEEEECccCHHH
Confidence 456779999999998754 4579999999 499999999999999999986 4 7999999 78999
Q ss_pred hhhCCCccccEEEEEeCCe
Q psy160 254 AKRYSIKTFPALVYFRNGN 272 (346)
Q Consensus 254 ~~~~~i~~~Pti~~~~~g~ 272 (346)
+++|+|+++||+++|++|.
T Consensus 96 a~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 96 VKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp HHHTTCCSSCEEEEECCCC
T ss_pred HHHcCCCCCCEEEEEcCCC
Confidence 9999999999999999884
No 112
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.59 E-value=8.9e-16 Score=121.06 Aligned_cols=104 Identities=13% Similarity=0.231 Sum_probs=86.6
Q ss_pred cCceeecCHHHHHHHHhc-CCcEEEEEECCCChhHHHHHHHHHHHHhhccC-CCcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 86 KNEIEEVNRRMLDKLLEE-NEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~-~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~-~~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
...|..++.++|+..+.. +++++|+||++||++|+.+.|.|.++++.+.. .++.++.+| +..++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEE
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEE
Confidence 347899999999988764 78999999999999999999999999999853 358888887 5678889999999999
Q ss_pred EEEecCC---cceec-CCcchhHHHHHHHhhccc
Q psy160 161 VYFRHRF---PSIYR-GDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 161 ~~~~~g~---~~~y~-g~~~~~~~i~~fi~~~~~ 190 (346)
++|.+|. ...|. |.++ .++|.+|+.+...
T Consensus 86 ~~~~~g~~~~~~~~~gg~~~-~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 86 YFAPSGDKKNPIKFEGGNRD-LEHLSKFIDEHAT 118 (133)
T ss_dssp EEECTTCTTSCEECCSSCCS-TTHHHHHHHHHSS
T ss_pred EEEeCCCcccceEecCCCcC-HHHHHHHHHHhcc
Confidence 9998765 33577 4466 4489999988754
No 113
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.59 E-value=4.8e-15 Score=115.02 Aligned_cols=99 Identities=14% Similarity=0.266 Sum_probs=82.3
Q ss_pred ceeecC-HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEE
Q psy160 88 EIEEVN-RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 88 ~v~~l~-~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~ 163 (346)
.+..++ .++|++++.++++++|.||++||++|+.+.|.+.++++.+.+.++.++.++ +++++++|+|.++||+++|
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~ 95 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFF 95 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEE
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEE
Confidence 555565 699999998889999999999999999999999999998854346666654 6789999999999999999
Q ss_pred ecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 164 RHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 164 ~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
++|+. ..+.|. + .++|.+|+.+.
T Consensus 96 ~~G~~~~~~~G~-~-~~~l~~~l~~~ 119 (121)
T 2j23_A 96 KNGQKIDTVVGA-D-PSKLQAAITQH 119 (121)
T ss_dssp ETTEEEEEEESS-C-HHHHHHHHHHH
T ss_pred ECCeEEeeEcCC-C-HHHHHHHHHHh
Confidence 98884 457887 5 44899988764
No 114
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.59 E-value=5.3e-15 Score=117.83 Aligned_cols=99 Identities=22% Similarity=0.406 Sum_probs=82.4
Q ss_pred cCcEEEccHHHHHHHHhc------------cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhh
Q psy160 191 EDRIELITRVMLETMVEE------------TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAK 255 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~------------~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~ 255 (346)
++.+..++.++|++.+.+ +++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+ .++++++
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELAR 99 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHH
Confidence 456778999999986653 78999999999999999999999999999986 6888888 6789999
Q ss_pred hCCCccccEEEEE-eCCeEEEeecCccccccchhhhhhh
Q psy160 256 RYSIKTFPALVYF-RNGNPLIFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 256 ~~~i~~~Pti~~~-~~g~~~~y~g~~~~~~~~~~~~~i~ 293 (346)
+|+|.++|++++| ++|+...+.|..+.+. +..+++
T Consensus 100 ~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~---l~~~l~ 135 (141)
T 3hxs_A 100 DFGIQSIPTIWFVPMKGEPQVNMGALSKEQ---LKGYID 135 (141)
T ss_dssp HTTCCSSSEEEEECSSSCCEEEESCCCHHH---HHHHHH
T ss_pred HcCCCCcCEEEEEeCCCCEEEEeCCCCHHH---HHHHHH
Confidence 9999999999999 6777778888876333 555544
No 115
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.59 E-value=6.4e-15 Score=116.77 Aligned_cols=100 Identities=20% Similarity=0.354 Sum_probs=83.9
Q ss_pred CcEEEccHHHHHHHHh------------ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhh
Q psy160 192 DRIELITRVMLETMVE------------ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKR 256 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~------------~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~ 256 (346)
..+..++.++|++.+. ++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+ .+++++++
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHH
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHH
Confidence 4577889999998654 468999999999999999999999999999886 6888888 57789999
Q ss_pred CCCccccEEEEE-eCCeEEEeecCccccccchhhhhhhcc
Q psy160 257 YSIKTFPALVYF-RNGNPLIFEGENKILKGTYIGTYISTK 295 (346)
Q Consensus 257 ~~i~~~Pti~~~-~~g~~~~y~g~~~~~~~~~~~~~i~~~ 295 (346)
|+|.++||+++| ++|+.+.+.|..+.+. +..+++..
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~~~~G~~~~~~---l~~~l~~~ 124 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPEMAQGAMPKAS---FKKAIDEF 124 (136)
T ss_dssp TTCCSSCEEEEECSSSCCEEEESCCCHHH---HHHHHHHH
T ss_pred cCCCCCCEEEEECCCCcEEEEeCCCCHHH---HHHHHHHH
Confidence 999999999999 8898878888876433 55555543
No 116
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.59 E-value=1e-14 Score=110.16 Aligned_cols=97 Identities=15% Similarity=0.359 Sum_probs=81.2
Q ss_pred cEEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEE
Q psy160 193 RIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 268 (346)
Q Consensus 193 ~v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~ 268 (346)
.+..++.++|++. .+++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .++.++++|+|.++|++++|
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 5678899999875 46788999999999999999999999999999986 7888888 57789999999999999999
Q ss_pred eCCeEE-EeecCccccccchhhhhhh
Q psy160 269 RNGNPL-IFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 269 ~~g~~~-~y~g~~~~~~~~~~~~~i~ 293 (346)
++|+.+ .+.|..+.+. +..+++
T Consensus 82 ~~G~~~~~~~G~~~~~~---l~~~l~ 104 (107)
T 2i4a_A 82 RDGKVIDKKVGALPKSQ---LKAWVE 104 (107)
T ss_dssp ETTEEEEEEESCCCHHH---HHHHHH
T ss_pred eCCEEEEEecCCCCHHH---HHHHHH
Confidence 999864 4778765322 555544
No 117
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.59 E-value=1.4e-14 Score=112.97 Aligned_cols=99 Identities=11% Similarity=0.225 Sum_probs=82.0
Q ss_pred cCceeec-CHHHHHHHHhc----CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCc
Q psy160 86 KNEIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKL 157 (346)
Q Consensus 86 ~~~v~~l-~~~~~~~~~~~----~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~ 157 (346)
...+.++ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+. ++.++.+| ++.++++|+|.++
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHHcCCCcc
Confidence 3467777 68999998865 7899999999999999999999999999875 47777665 6789999999999
Q ss_pred ceEEEEecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 158 PAVVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 158 Ptl~~~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
||+++|++|+. ..+.|. + .+++.+++.+.
T Consensus 93 Pt~~~~~~G~~~~~~~G~-~-~~~l~~~l~~~ 122 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVGA-K-KDELQSTIAKH 122 (124)
T ss_dssp SEEEEEETTEEEEEEESC-C-HHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCC-C-HHHHHHHHHHh
Confidence 99999998884 357774 4 44888888764
No 118
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.59 E-value=6.1e-15 Score=118.62 Aligned_cols=99 Identities=17% Similarity=0.436 Sum_probs=84.3
Q ss_pred cCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 191 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
...+..++.++|++.+..+++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+ .+++++++|+|.++||+++
T Consensus 37 ~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 115 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPALSTRFRIRSIPTIML 115 (148)
T ss_dssp CCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHHHHHHCCCCccCEEEE
Confidence 34677899999999888899999999999999999999999999999976 6888888 6789999999999999999
Q ss_pred EeCCeEE-EeecCccccccchhhhhhh
Q psy160 268 FRNGNPL-IFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 268 ~~~g~~~-~y~g~~~~~~~~~~~~~i~ 293 (346)
|++|+.+ .|.|..+.+. +..+++
T Consensus 116 ~~~G~~~~~~~G~~~~~~---l~~~l~ 139 (148)
T 3p2a_A 116 YRNGKMIDMLNGAVPKAP---FDNWLD 139 (148)
T ss_dssp EETTEEEEEESSCCCHHH---HHHHHH
T ss_pred EECCeEEEEEeCCCCHHH---HHHHHH
Confidence 9999864 4778765332 444544
No 119
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.58 E-value=7.2e-15 Score=117.04 Aligned_cols=101 Identities=19% Similarity=0.278 Sum_probs=72.3
Q ss_pred CceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEE
Q psy160 87 NEIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~ 163 (346)
+.+.+++.++|++.+..++.++|+||++||++|+.+.|.|+++++.+.+ ++.++.+| +..++++|+|.++||+++|
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCHHHHHHCCCCccCEEEEE
Confidence 4678899999999877665599999999999999999999999998864 37777765 7789999999999999999
Q ss_pred ecCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 164 RHRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 164 ~~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
++|+. ..+.|..+.+ .+.+|+.+..
T Consensus 112 ~~G~~~~~~~G~~~~~-~l~~~i~~~l 137 (140)
T 1v98_A 112 RRGAPVATWVGASPRR-VLEERLRPYL 137 (140)
T ss_dssp ETTEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred eCCcEEEEEeCCCCHH-HHHHHHHHHH
Confidence 98884 4588988744 8999987654
No 120
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.58 E-value=1.1e-14 Score=110.72 Aligned_cols=85 Identities=20% Similarity=0.424 Sum_probs=74.7
Q ss_pred cEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEe
Q psy160 193 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~ 269 (346)
.....+.++|+++++++++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|+++||+++|+
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 85 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDELGDVAQKNEVSAMPTLLLFK 85 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCccCEEEEEE
Confidence 44566789999999999999999999999999999999999999987 4777777 678999999999999999999
Q ss_pred CCeEE-EeecC
Q psy160 270 NGNPL-IFEGE 279 (346)
Q Consensus 270 ~g~~~-~y~g~ 279 (346)
+|+.+ .+.|.
T Consensus 86 ~G~~~~~~~G~ 96 (109)
T 3f3q_A 86 NGKEVAKVVGA 96 (109)
T ss_dssp TTEEEEEEESS
T ss_pred CCEEEEEEeCC
Confidence 99864 46676
No 121
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.58 E-value=2.2e-15 Score=113.82 Aligned_cols=91 Identities=24% Similarity=0.390 Sum_probs=65.0
Q ss_pred cHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeCCeEE
Q psy160 198 TRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPL 274 (346)
Q Consensus 198 ~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~~ 274 (346)
+.++|+++++++++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|+++||+++|++|+.+
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI 84 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CCCCEEEEEETTEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE
Confidence 456777777888999999999999999999999999999984 6888887 67889999999999999999999864
Q ss_pred -EeecCccccccchhhhhhh
Q psy160 275 -IFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 275 -~y~g~~~~~~~~~~~~~i~ 293 (346)
.+.|..+.+. +..+++
T Consensus 85 ~~~~g~~~~~~---l~~~l~ 101 (105)
T 4euy_A 85 LRESRFISLEN---LERTIQ 101 (105)
T ss_dssp EEEESSCCHHH---HHHHHH
T ss_pred EEEeCCcCHHH---HHHHHH
Confidence 4677765322 444444
No 122
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.58 E-value=1.2e-14 Score=117.24 Aligned_cols=95 Identities=11% Similarity=0.270 Sum_probs=79.0
Q ss_pred cCHHHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEecC
Q psy160 92 VNRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHR 166 (346)
Q Consensus 92 l~~~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g 166 (346)
.+.++|++.+. ++++++|.|||+||++|+.+.|.++++++.+.+. +.++.+| ++.++++|+|.++||++++++|
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 87 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISYIPSTVFFFNG 87 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCSSSEEEEEETT
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCccCeEEEEECC
Confidence 46889999885 4789999999999999999999999999988543 6666665 7789999999999999999999
Q ss_pred Ccc----------eecC-CcchhHHHHHHHhhc
Q psy160 167 FPS----------IYRG-DLSEEEEVLQWLITQ 188 (346)
Q Consensus 167 ~~~----------~y~g-~~~~~~~i~~fi~~~ 188 (346)
+.. .+.| ..+ .+++.++++..
T Consensus 88 ~~v~~~~g~~~~~~~~G~~~~-~~~l~~~l~~~ 119 (149)
T 3gix_A 88 QHMKVDYGSPDHTKFVGSFKT-KQDFIDLIEVI 119 (149)
T ss_dssp EEEEEECSSSCCSCEESCCSS-HHHHHHHHHHH
T ss_pred eEEEeecCCCCCCeEeeecCC-HHHHHHHHHHH
Confidence 855 5778 555 44788887764
No 123
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.1e-14 Score=111.16 Aligned_cols=87 Identities=14% Similarity=0.350 Sum_probs=71.9
Q ss_pred EEEccH-HHHHHHHhc---cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 194 IELITR-VMLETMVEE---TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 194 v~~l~~-~~~~~~~~~---~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
+..++. ++|++++++ +++++|.||++||++|+.+.|.++++++.++..++.++.+ .+++++++|+|+++||++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 445665 899998875 7899999999999999999999999999964336888888 578899999999999999
Q ss_pred EEeCCeEEE-eecCc
Q psy160 267 YFRNGNPLI-FEGEN 280 (346)
Q Consensus 267 ~~~~g~~~~-y~g~~ 280 (346)
+|++|+.+. +.|..
T Consensus 82 ~~~~G~~~~~~~G~~ 96 (112)
T 3d6i_A 82 IIHKGTILKELSGAD 96 (112)
T ss_dssp EEETTEEEEEECSCC
T ss_pred EEECCEEEEEecCCC
Confidence 999998654 66764
No 124
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.58 E-value=1.4e-14 Score=112.07 Aligned_cols=90 Identities=20% Similarity=0.322 Sum_probs=78.7
Q ss_pred cCcEEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 191 EDRIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
++.+..++.++|++. ++++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+ .+.+++++|+|.++|+++
T Consensus 12 ~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 90 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHTDLAIEYEVSAVPTVL 90 (119)
T ss_dssp CSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcccEEE
Confidence 457888999999885 56788999999999999999999999999999876 6888888 577899999999999999
Q ss_pred EEeCCeEE-EeecCcc
Q psy160 267 YFRNGNPL-IFEGENK 281 (346)
Q Consensus 267 ~~~~g~~~-~y~g~~~ 281 (346)
+|++|+.+ .+.|..+
T Consensus 91 ~~~~G~~~~~~~G~~~ 106 (119)
T 1w4v_A 91 AMKNGDVVDKFVGIKD 106 (119)
T ss_dssp EEETTEEEEEEESCCC
T ss_pred EEeCCcEEEEEcCCCC
Confidence 99999854 5777764
No 125
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.58 E-value=4.5e-15 Score=132.82 Aligned_cols=102 Identities=20% Similarity=0.371 Sum_probs=88.3
Q ss_pred cCceeecCHHHHHHHHhc--CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceE
Q psy160 86 KNEIEEVNRRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~--~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
.+.|.++|.++|++++.. +++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+| ++.++++|+|.++||+
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 347999999999998865 68999999999999999999999999999865 37777765 7899999999999999
Q ss_pred EEEecCCcc-eecCCcchhHHHHHHHhhcc
Q psy160 161 VYFRHRFPS-IYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 161 ~~~~~g~~~-~y~g~~~~~~~i~~fi~~~~ 189 (346)
++|++|+.+ .|.|..+.+ .+.+|+....
T Consensus 85 ~~~~~G~~~~~~~g~~~~~-~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQNGQPVDGFQGPQPEE-AIRALLDXVL 113 (287)
T ss_dssp EEEETTEEEEEEESCCCHH-HHHHHHHHHS
T ss_pred EEEECCEEEEEeeCCCCHH-HHHHHHHHHc
Confidence 999999854 588988744 8999998765
No 126
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.58 E-value=2.1e-14 Score=109.74 Aligned_cols=88 Identities=14% Similarity=0.370 Sum_probs=77.0
Q ss_pred ccCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 190 TEDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 190 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
.++....++.++|+++++++++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|.++||++
T Consensus 7 ~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 84 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVSEVTEKENITSMPTFK 84 (112)
T ss_dssp --CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ceeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 45677889999999999999999999999999999999999999999986 4778877 577899999999999999
Q ss_pred EEeCCeEE-EeecC
Q psy160 267 YFRNGNPL-IFEGE 279 (346)
Q Consensus 267 ~~~~g~~~-~y~g~ 279 (346)
++++|+.+ .+.|.
T Consensus 85 ~~~~G~~~~~~~G~ 98 (112)
T 1syr_A 85 VYKNGSSVDTLLGA 98 (112)
T ss_dssp EEETTEEEEEEESC
T ss_pred EEECCcEEEEEeCC
Confidence 99999864 46676
No 127
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.58 E-value=1.3e-14 Score=116.94 Aligned_cols=78 Identities=18% Similarity=0.310 Sum_probs=70.0
Q ss_pred EccHHHHHHHH--hccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeC
Q psy160 196 LITRVMLETMV--EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 196 ~l~~~~~~~~~--~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~ 270 (346)
..+.++|++.+ +++++++|.|||+||++|+.+.|.++++++++.+ .+.++.+ .+++++++|+|.++||++++++
T Consensus 8 i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~-~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 86 (149)
T 3gix_A 8 LTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK-MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFN 86 (149)
T ss_dssp ECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT-TEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCcCHHHHHHcCCCccCeEEEEEC
Confidence 45778999876 4588999999999999999999999999999985 5888888 6789999999999999999999
Q ss_pred CeEE
Q psy160 271 GNPL 274 (346)
Q Consensus 271 g~~~ 274 (346)
|+.+
T Consensus 87 G~~v 90 (149)
T 3gix_A 87 GQHM 90 (149)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 9876
No 128
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.57 E-value=1.4e-14 Score=108.55 Aligned_cols=86 Identities=17% Similarity=0.471 Sum_probs=76.0
Q ss_pred EEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeC
Q psy160 194 IELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 194 v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~ 270 (346)
|..++.++|++.++++++++|.||++||++|+.+.|.++++++.+.+ +.++.+ .+++++++|+++++|++++|++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 78 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENPDIAARYGVMSLPTVIFFKD 78 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSCEEEEEET
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCHHHHHhCCccccCEEEEEEC
Confidence 35788899999888889999999999999999999999999999874 778877 5788999999999999999999
Q ss_pred CeEE-EeecCcc
Q psy160 271 GNPL-IFEGENK 281 (346)
Q Consensus 271 g~~~-~y~g~~~ 281 (346)
|+.+ .+.|..+
T Consensus 79 g~~~~~~~g~~~ 90 (104)
T 2e0q_A 79 GEPVDEIIGAVP 90 (104)
T ss_dssp TEEEEEEESCCC
T ss_pred CeEhhhccCCCC
Confidence 9864 5778765
No 129
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.57 E-value=8.8e-15 Score=112.81 Aligned_cols=86 Identities=15% Similarity=0.261 Sum_probs=70.8
Q ss_pred cEEEccHHHHHHHH-hccc--eEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEcChhhhhhCCCccccEEEEEe
Q psy160 193 RIELITRVMLETMV-EETQ--YLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 193 ~v~~l~~~~~~~~~-~~~~--~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~~i~~~Pti~~~~ 269 (346)
.+..++.++|.+.+ ++++ +++|.||++||++|+.+.|.++++|+++. ++.|++++-.+.+++|+|++.||+++|+
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~~~~~~v~~~PT~~~fk 81 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSCIQHYHDNCLPTIFVYK 81 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGTSTTCCGGGCSEEEEEE
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHhHHHCCCCCCCEEEEEE
Confidence 45677889998854 4444 89999999999999999999999999986 5899999444457899999999999999
Q ss_pred CCeEEE-eecCc
Q psy160 270 NGNPLI-FEGEN 280 (346)
Q Consensus 270 ~g~~~~-y~g~~ 280 (346)
+|+.+. +.|..
T Consensus 82 ~G~~v~~~~G~~ 93 (118)
T 3evi_A 82 NGQIEAKFIGII 93 (118)
T ss_dssp TTEEEEEEESTT
T ss_pred CCEEEEEEeChh
Confidence 998654 45543
No 130
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.57 E-value=1.2e-14 Score=110.81 Aligned_cols=89 Identities=24% Similarity=0.457 Sum_probs=77.0
Q ss_pred CcEEEccHHHHHH-HHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 192 DRIELITRVMLET-MVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 192 ~~v~~l~~~~~~~-~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
..+..++.+++++ +++++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+ .+++++++|+|.++||+++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 83 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDENPGTAAKYGVMSIPTLNV 83 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCCHHHHHhCCCCcccEEEE
Confidence 3567889999977 456788999999999999999999999999999875 6888888 5788999999999999999
Q ss_pred EeCCeEE-EeecCcc
Q psy160 268 FRNGNPL-IFEGENK 281 (346)
Q Consensus 268 ~~~g~~~-~y~g~~~ 281 (346)
+++|+.+ .+.|..+
T Consensus 84 ~~~G~~~~~~~G~~~ 98 (112)
T 1t00_A 84 YQGGEVAKTIVGAKP 98 (112)
T ss_dssp EETTEEEEEEESCCC
T ss_pred EeCCEEEEEEeCCCC
Confidence 9999864 4778765
No 131
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.57 E-value=1.9e-15 Score=117.73 Aligned_cols=100 Identities=19% Similarity=0.323 Sum_probs=79.9
Q ss_pred CceeecCHHHHHHHH-hcCCcEEEEEECCCCh--------------hHHHHHHHHHHHHhhccCCCcEEEEeC---Chhh
Q psy160 87 NEIEEVNRRMLDKLL-EENEFVTVFFYETDHK--------------DSVKVLERLEKIDGETDNMDITFVKMA---DPRY 148 (346)
Q Consensus 87 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~--------------~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l 148 (346)
+.+.+++.++|++.+ +++++++|.||++||+ +|+.+.|.++++++.+.+ ++.++.+| ++.+
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGT 81 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTTT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHH
Confidence 468889999998654 5678999999999999 999999999999988754 37777765 6789
Q ss_pred HHhhCCCCcceEEEEecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 149 ARKWGVTKLPAVVYFRHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 149 ~~~~~i~~~Ptl~~~~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
+++|+|+++||+++|++|+. ..+.|..+.+ ++.+|+++.
T Consensus 82 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~ 121 (123)
T 1oaz_A 82 APKYGIRGIPTLLLFKNGEVAATKVGALSKG-QLKEFLDAN 121 (123)
T ss_dssp GGGGTCCBSSEEEEEESSSEEEEEESCCCHH-HHHHHHTTT
T ss_pred HHHcCCCccCEEEEEECCEEEEEEeCCCCHH-HHHHHHHHH
Confidence 99999999999999998984 4588988744 899998764
No 132
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.57 E-value=2.9e-15 Score=117.49 Aligned_cols=97 Identities=12% Similarity=0.302 Sum_probs=78.8
Q ss_pred eeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEec
Q psy160 89 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRH 165 (346)
Q Consensus 89 v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~ 165 (346)
+..++.+.++....++++++|.||++||++|+++.|.++++++.+.+ ++.++.++ ++.++++|+|.++||+++|++
T Consensus 27 ~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 105 (128)
T 3ul3_B 27 LQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKNESLARKFSVKSLPTIILLKN 105 (128)
T ss_dssp CCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEET
T ss_pred cccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCCcCEEEEEEC
Confidence 33444444555556778999999999999999999999999998853 37777665 779999999999999999988
Q ss_pred CC-cceecCCcchhHHHHHHHhh
Q psy160 166 RF-PSIYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 166 g~-~~~y~g~~~~~~~i~~fi~~ 187 (346)
|+ ...+.|..+.+ ++.+|+++
T Consensus 106 G~~~~~~~G~~~~~-~l~~~l~~ 127 (128)
T 3ul3_B 106 KTMLARKDHFVSSN-DLIALIKK 127 (128)
T ss_dssp TEEEEEESSCCCHH-HHHHHHTT
T ss_pred CEEEEEecCCCCHH-HHHHHHHh
Confidence 88 44588888744 89999875
No 133
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=5.1e-15 Score=117.49 Aligned_cols=91 Identities=16% Similarity=0.306 Sum_probs=78.6
Q ss_pred cCcEEEccHHHHHHHHhccc--eEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCc-----
Q psy160 191 EDRIELITRVMLETMVEETQ--YLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIK----- 260 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~--~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~----- 260 (346)
+..+..++.++|++.+..++ +++|.||++||++|+.+.|.|+++++++.+.++.++.+ .+++++++|+|+
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 45678899999999876544 89999999999999999999999999997546899988 678899999999
Q ss_pred -cccEEEEEeCCeEE-EeecCcc
Q psy160 261 -TFPALVYFRNGNPL-IFEGENK 281 (346)
Q Consensus 261 -~~Pti~~~~~g~~~-~y~g~~~ 281 (346)
++||+++|++|+.+ .+.|..+
T Consensus 86 ~~~Pt~~~~~~G~~~~~~~G~~~ 108 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAMRRPQIDK 108 (137)
T ss_dssp SCSSEEEEESSSSEEEEESCBCS
T ss_pred CCCCEEEEEECCEEEEEecCcCc
Confidence 99999999999864 4677665
No 134
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=8.2e-15 Score=115.35 Aligned_cols=91 Identities=20% Similarity=0.401 Sum_probs=78.8
Q ss_pred cCcEEEccHHHHHHHH-hccceEEEEEEcCCChhhHHHHHHHHHHHhhcC----cCceEEEEE---cChhhhhhCCCccc
Q psy160 191 EDRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECD----IYGIHMVKI---QDPQLAKRYSIKTF 262 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~----~~~i~~~~i---~~~~~~~~~~i~~~ 262 (346)
+..+..++.++|++.+ +++++++|.||++||++|+.+.|.+.++++.+. + ++.++.+ .+.+++++|+|+++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG-KVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT-SEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC-cEEEEEEECCCCHHHHHhCCCCee
Confidence 3467789999999864 678899999999999999999999999999986 4 6889888 57789999999999
Q ss_pred cEEEEEeCCeE-EEeecCccc
Q psy160 263 PALVYFRNGNP-LIFEGENKI 282 (346)
Q Consensus 263 Pti~~~~~g~~-~~y~g~~~~ 282 (346)
||+++|++|+. ..|.|.++.
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~ 105 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTR 105 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSH
T ss_pred CeEEEEeCCCceEEecCCCCH
Confidence 99999999974 568887653
No 135
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.57 E-value=2.3e-14 Score=109.59 Aligned_cols=89 Identities=22% Similarity=0.374 Sum_probs=78.0
Q ss_pred CcEEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 192 DRIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 192 ~~v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
+.+..++.++|++. ++.+++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|.++|++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPNPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTCHHHHHHTTCCSSSEEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCCHHHHHHcCCCceeEEEE
Confidence 35778999999976 56788999999999999999999999999999886 6888888 5788999999999999999
Q ss_pred EeCCeEE-EeecCcc
Q psy160 268 FRNGNPL-IFEGENK 281 (346)
Q Consensus 268 ~~~g~~~-~y~g~~~ 281 (346)
|++|+.+ .+.|..+
T Consensus 86 ~~~G~~~~~~~g~~~ 100 (115)
T 1thx_A 86 VKGEQILDSTEGVIS 100 (115)
T ss_dssp EETTEEEEEEESCCC
T ss_pred EcCCEEEEEecCCCC
Confidence 9999865 4778765
No 136
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.57 E-value=2.2e-14 Score=108.54 Aligned_cols=83 Identities=16% Similarity=0.305 Sum_probs=71.7
Q ss_pred EccHHHHHHHH--hccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeC
Q psy160 196 LITRVMLETMV--EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 196 ~l~~~~~~~~~--~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~ 270 (346)
..+.++|++.+ .++++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|+++||+++|++
T Consensus 6 i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 83 (107)
T 1gh2_A 6 VGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQCQGTAATNNISATPTFQFFRN 83 (107)
T ss_dssp ECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSSSEEEEEET
T ss_pred ecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHhcCCCcccEEEEEEC
Confidence 44678999987 468899999999999999999999999999984 6888888 5788999999999999999999
Q ss_pred CeEE-EeecCc
Q psy160 271 GNPL-IFEGEN 280 (346)
Q Consensus 271 g~~~-~y~g~~ 280 (346)
|+.+ .+.|..
T Consensus 84 G~~~~~~~G~~ 94 (107)
T 1gh2_A 84 KVRIDQYQGAD 94 (107)
T ss_dssp TEEEEEEESSC
T ss_pred CeEEEEEeCCC
Confidence 9865 467743
No 137
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.56 E-value=3.8e-15 Score=114.82 Aligned_cols=102 Identities=21% Similarity=0.499 Sum_probs=84.9
Q ss_pred cCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc--CceEEEEE---cChhhhhhCCCccccEE
Q psy160 191 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDI--YGIHMVKI---QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~--~~i~~~~i---~~~~~~~~~~i~~~Pti 265 (346)
++.+..++.++|+++++++++++|.||++||++|+.+.|.+.++++.+.+ .++.++.+ .++.++++|+|+++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 35678899999999988899999999999999999999999999999863 25778888 56789999999999999
Q ss_pred EEEeCCeE---EEeecCccccccchhhhhhhcc
Q psy160 266 VYFRNGNP---LIFEGENKILKGTYIGTYISTK 295 (346)
Q Consensus 266 ~~~~~g~~---~~y~g~~~~~~~~~~~~~i~~~ 295 (346)
++|++|+. ..|.|..+.+. +..+++..
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~---l~~~l~~~ 115 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADD---IVNWLKKR 115 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHH---HHHHHHTT
T ss_pred EEEeCCCcCCcccccCccCHHH---HHHHHHhc
Confidence 99999974 57888765332 55666543
No 138
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.56 E-value=3.8e-14 Score=108.98 Aligned_cols=99 Identities=9% Similarity=0.170 Sum_probs=81.8
Q ss_pred ceeec-CHHHHHHHHhc----CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcce
Q psy160 88 EIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 159 (346)
Q Consensus 88 ~v~~l-~~~~~~~~~~~----~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Pt 159 (346)
.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. ++.++.++ ++.++++|+|.++||
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt 84 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEAMPT 84 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSBSE
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCcCcE
Confidence 56677 68999998875 7899999999999999999999999999876 46666664 678999999999999
Q ss_pred EEEEecCCcc-eecCCcchhHHHHHHHhhccc
Q psy160 160 VVYFRHRFPS-IYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 160 l~~~~~g~~~-~y~g~~~~~~~i~~fi~~~~~ 190 (346)
+++|++|+.. .+.|. + .+++.+++.+...
T Consensus 85 ~~~~~~g~~~~~~~g~-~-~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVGG-R-KDDIHTKIVALMG 114 (118)
T ss_dssp EEEEETTEEEEEEESC-C-HHHHHHHHHHHHC
T ss_pred EEEEeCCeEEEEecCC-C-HHHHHHHHHHHhc
Confidence 9999988843 46774 4 4488888877543
No 139
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.56 E-value=2.5e-14 Score=109.10 Aligned_cols=97 Identities=11% Similarity=0.230 Sum_probs=80.3
Q ss_pred ceeec-CHHHHHHHHhc----CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcce
Q psy160 88 EIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 159 (346)
Q Consensus 88 ~v~~l-~~~~~~~~~~~----~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Pt 159 (346)
.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.+.++++.+. ++.++.++ ++.++++|+|.++||
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEAMPT 82 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSSTTE
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCcccE
Confidence 56666 68999998875 6899999999999999999999999999875 47777665 678999999999999
Q ss_pred EEEEecCCcc-eecCCcchhHHHHHHHhhc
Q psy160 160 VVYFRHRFPS-IYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 160 l~~~~~g~~~-~y~g~~~~~~~i~~fi~~~ 188 (346)
+++|++|+.. .+.| .+ .+++.+++.+.
T Consensus 83 ~~~~~~G~~~~~~~g-~~-~~~l~~~l~~~ 110 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVG-AD-KDGLPTLVAKH 110 (113)
T ss_dssp EEEEETTEEEEEEEC-CC-TTHHHHHHHHH
T ss_pred EEEEeCCEEEEEEec-CC-HHHHHHHHHHh
Confidence 9999988843 4677 44 33788888764
No 140
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.56 E-value=1e-14 Score=114.39 Aligned_cols=88 Identities=25% Similarity=0.394 Sum_probs=77.0
Q ss_pred cEEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEE
Q psy160 193 RIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 268 (346)
Q Consensus 193 ~v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~ 268 (346)
.+..++.++|++. ++++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|.++||+++|
T Consensus 23 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 23 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred ccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4668899999864 57789999999999999999999999999999986 6888888 57789999999999999999
Q ss_pred eCCeEE-EeecCcc
Q psy160 269 RNGNPL-IFEGENK 281 (346)
Q Consensus 269 ~~g~~~-~y~g~~~ 281 (346)
++|+.+ .+.|..+
T Consensus 102 ~~G~~~~~~~G~~~ 115 (128)
T 2o8v_B 102 KNGEVAATKVGALS 115 (128)
T ss_dssp ETTEEEEEEESCCC
T ss_pred eCCEEEEEEcCCCC
Confidence 999854 4778765
No 141
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.56 E-value=1.2e-14 Score=124.08 Aligned_cols=108 Identities=18% Similarity=0.357 Sum_probs=88.8
Q ss_pred cCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 191 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
...+..++.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+ .+.++.+ .+++++++|+|.++||+++
T Consensus 96 ~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 174 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRMLCRMKGVNSYPSLFI 174 (210)
T ss_dssp CTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHHHHHHcCCCcCCeEEE
Confidence 45677899999999888899999999999999999999999999999986 6889888 6788999999999999999
Q ss_pred EeCCe-EEEeecCccccccchhhhhhhccCCCCCCc
Q psy160 268 FRNGN-PLIFEGENKILKGTYIGTYISTKAFSLIPF 302 (346)
Q Consensus 268 ~~~g~-~~~y~g~~~~~~~~~~~~~i~~~~~~~~~~ 302 (346)
|++|+ ...|.|.++.+. +..++.....+.+.+
T Consensus 175 ~~~G~~~~~~~G~~~~~~---l~~~i~~~l~~~~~~ 207 (210)
T 3apq_A 175 FRSGMAAVKYNGDRSKES---LVAFAMQHVRSTVTE 207 (210)
T ss_dssp ECTTSCCEECCSCCCHHH---HHHHHHHHHHCCSSC
T ss_pred EECCCceeEecCCCCHHH---HHHHHHHhCccccee
Confidence 99997 456888765332 556665543333333
No 142
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.56 E-value=1.1e-14 Score=112.45 Aligned_cols=88 Identities=18% Similarity=0.304 Sum_probs=74.5
Q ss_pred cEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc-------ChhhhhhCCCccccEE
Q psy160 193 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ-------DPQLAKRYSIKTFPAL 265 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~-------~~~~~~~~~i~~~Pti 265 (346)
.+..++.+++++.++++++++|.||++||++|+.+.|.++++++.+.. .+.++.+. ..+++++|+|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~ 91 (118)
T 1zma_A 13 DLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYFINSEEPSQLNDLQAFRSRYGIPTVPGF 91 (118)
T ss_dssp TSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEEEETTCGGGHHHHHHHHHHHTCCSSCEE
T ss_pred hhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEEEECCCcCcHHHHHHHHHHcCCCCCCeE
Confidence 456789999999888889999999999999999999999999998764 67777652 2468899999999999
Q ss_pred EEEeCCeEE-EeecCcc
Q psy160 266 VYFRNGNPL-IFEGENK 281 (346)
Q Consensus 266 ~~~~~g~~~-~y~g~~~ 281 (346)
++|++|+.+ .+.|..+
T Consensus 92 ~~~~~G~~~~~~~G~~~ 108 (118)
T 1zma_A 92 VHITDGQINVRCDSSMS 108 (118)
T ss_dssp EEEETTEEEEECCTTCC
T ss_pred EEEECCEEEEEecCCCC
Confidence 999999854 4677765
No 143
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.56 E-value=3.3e-14 Score=115.08 Aligned_cols=85 Identities=21% Similarity=0.472 Sum_probs=73.2
Q ss_pred cEEEc-cHHHHHHHHhc--cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 193 RIELI-TRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 193 ~v~~l-~~~~~~~~~~~--~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
.+..+ +.++|++++++ +++++|.||++||++|+.+.|.++++++.+. ++.|+.+ .+++++++|+|.++|+++
T Consensus 13 ~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 90 (153)
T 2wz9_A 13 AVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGVPEVSEKYEISSVPTFL 90 (153)
T ss_dssp CSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred CeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 34455 47999998887 8999999999999999999999999999975 6888888 578899999999999999
Q ss_pred EEeCCeEEE-eecC
Q psy160 267 YFRNGNPLI-FEGE 279 (346)
Q Consensus 267 ~~~~g~~~~-y~g~ 279 (346)
+|++|+.+. +.|.
T Consensus 91 ~~~~G~~~~~~~G~ 104 (153)
T 2wz9_A 91 FFKNSQKIDRLDGA 104 (153)
T ss_dssp EEETTEEEEEEESS
T ss_pred EEECCEEEEEEeCC
Confidence 999998754 5564
No 144
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.56 E-value=1.7e-14 Score=109.06 Aligned_cols=87 Identities=20% Similarity=0.417 Sum_probs=75.9
Q ss_pred EEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEe
Q psy160 194 IELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 194 v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~ 269 (346)
+..++.++|++. .+++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|.++||+++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 567899999885 46788999999999999999999999999999876 6888888 578899999999999999999
Q ss_pred CCeEE-EeecCcc
Q psy160 270 NGNPL-IFEGENK 281 (346)
Q Consensus 270 ~g~~~-~y~g~~~ 281 (346)
+|+.+ .+.|..+
T Consensus 82 ~G~~~~~~~G~~~ 94 (107)
T 1dby_A 82 GGKKCETIIGAVP 94 (107)
T ss_dssp SSSEEEEEESCCC
T ss_pred CCEEEEEEeCCCC
Confidence 99754 4777765
No 145
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.55 E-value=3.2e-14 Score=108.44 Aligned_cols=85 Identities=15% Similarity=0.315 Sum_probs=73.9
Q ss_pred EEEc-cHHHHHHHHhc----cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEE
Q psy160 194 IELI-TRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 194 v~~l-~~~~~~~~~~~----~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti 265 (346)
+..+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|+++||+
T Consensus 4 v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 4 VIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred EEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCcccEE
Confidence 4455 67899998765 78999999999999999999999999999886 7888888 57889999999999999
Q ss_pred EEEeCCeEE-EeecC
Q psy160 266 VYFRNGNPL-IFEGE 279 (346)
Q Consensus 266 ~~~~~g~~~-~y~g~ 279 (346)
+++++|+.+ .+.|.
T Consensus 83 ~~~~~G~~~~~~~G~ 97 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA 97 (112)
T ss_dssp EEEETTEEEEEEESC
T ss_pred EEEECCeEEEEEcCC
Confidence 999999854 46776
No 146
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.55 E-value=2e-14 Score=108.09 Aligned_cols=87 Identities=21% Similarity=0.438 Sum_probs=75.4
Q ss_pred EEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEe
Q psy160 194 IELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 194 v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~ 269 (346)
+..++.++|++. .+++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|.++||+++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 80 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchHHHHHhCCCCcccEEEEEe
Confidence 457888999885 45678999999999999999999999999999886 6888888 577899999999999999999
Q ss_pred CCeEE-EeecCcc
Q psy160 270 NGNPL-IFEGENK 281 (346)
Q Consensus 270 ~g~~~-~y~g~~~ 281 (346)
+|+.+ .+.|..+
T Consensus 81 ~g~~~~~~~G~~~ 93 (105)
T 1fb6_A 81 NGERKESIIGAVP 93 (105)
T ss_dssp TTEEEEEEEECCC
T ss_pred CCeEEEEEecCCC
Confidence 99865 4677765
No 147
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.55 E-value=4.5e-14 Score=109.01 Aligned_cols=100 Identities=20% Similarity=0.261 Sum_probs=80.4
Q ss_pred ceeec--CHHHHHH-HHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEE
Q psy160 88 EIEEV--NRRMLDK-LLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVV 161 (346)
Q Consensus 88 ~v~~l--~~~~~~~-~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~ 161 (346)
.+..+ +.++|++ +..++++++|.||++||++|+.+.|.+.++++.+ .++.++.+| ++.++++|+|.++||++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGNAADAYGVSSIPALF 81 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 46666 6889985 4456789999999999999999999999999987 347777765 77899999999999999
Q ss_pred EEec----CCc-ceecCCcchhHHHHHHHhhcccc
Q psy160 162 YFRH----RFP-SIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 162 ~~~~----g~~-~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
+|.+ |+. ..+.|... . +|.+.+.+...+
T Consensus 82 ~~~~~~~~G~~~~~~~G~~~-~-~l~~~~~~~~~~ 114 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGADV-S-RIKADIEKFKHH 114 (118)
T ss_dssp EEEEETTEEEEEEEEESCCH-H-HHHHHHHHHC--
T ss_pred EEeCCCCcceEEEeecCCCH-H-HHHHHHHHhhhc
Confidence 9987 763 45788775 4 688888776543
No 148
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.55 E-value=4.7e-14 Score=106.21 Aligned_cols=84 Identities=19% Similarity=0.439 Sum_probs=72.6
Q ss_pred EEEccH-HHHHHHHh--ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 194 IELITR-VMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 194 v~~l~~-~~~~~~~~--~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
+..++. +++++.++ ++++++|.||++||++|+.+.|.++++++.+++ ++.++.+ .+++++++|++.++||+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDECEDIAMEYNISSMPTFVF 80 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccchHHHHHHcCCCcccEEEE
Confidence 345655 88988776 688999999999999999999999999999864 7888888 5778999999999999999
Q ss_pred EeCCeEE-Eeec
Q psy160 268 FRNGNPL-IFEG 278 (346)
Q Consensus 268 ~~~g~~~-~y~g 278 (346)
+++|+.+ .+.|
T Consensus 81 ~~~G~~~~~~~g 92 (106)
T 1xwb_A 81 LKNGVKVEEFAG 92 (106)
T ss_dssp EETTEEEEEEES
T ss_pred EcCCcEEEEEcC
Confidence 9999854 4667
No 149
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.55 E-value=6e-15 Score=117.73 Aligned_cols=101 Identities=10% Similarity=0.100 Sum_probs=73.1
Q ss_pred ceeecCHHHHHHHHhcCCcEEEEEECCC--ChhHHHHHHHHHHHHhhccCCCcE--EEEeC---ChhhHHhhCCCCcceE
Q psy160 88 EIEEVNRRMLDKLLEENEFVTVFFYETD--HKDSVKVLERLEKIDGETDNMDIT--FVKMA---DPRYARKWGVTKLPAV 160 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~--C~~c~~~~~~~~~~a~~~~~~~i~--~~~~~---~~~l~~~~~i~~~Ptl 160 (346)
.+..+++++|++++.+++.++|+|+++| |++|+.+.|.|+++++++ + ++. ++.+| +++++++|+|+++||+
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHHHHHHHTTTCCSSSEE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCCHHHHHhcCCCcCCeE
Confidence 4678899999999988888999999877 999999999999999988 3 366 88887 6789999999999999
Q ss_pred EEEecCC-cceecCCcchhHHHHHHHhhcccc
Q psy160 161 VYFRHRF-PSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 161 ~~~~~g~-~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
++|++|+ ..++.|..+.+ +|.+++.+...+
T Consensus 96 ~~fk~G~~v~~~~G~~~~~-~l~~~i~~~l~~ 126 (142)
T 2es7_A 96 LVFTDGKLRGALSGIHPWA-ELLTLMRSIVDT 126 (142)
T ss_dssp EEESCC----CEESCCCHH-HHHHHHHHHHC-
T ss_pred EEEeCCEEEEEEeCCCCHH-HHHHHHHHHhcc
Confidence 9999998 45688988744 899999887654
No 150
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.55 E-value=1.9e-14 Score=114.92 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=74.0
Q ss_pred CHHHHHHHHh--cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEecCC
Q psy160 93 NRRMLDKLLE--ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRF 167 (346)
Q Consensus 93 ~~~~~~~~~~--~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~ 167 (346)
+.++|++.+. ++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+| +++++++|+|.++||+++|++|+
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~ 88 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNK 88 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHHHHHHcCCCCCCEEEEEECCc
Confidence 5788987665 478999999999999999999999999998844 37777665 67899999999999999999887
Q ss_pred cce----------ecCCcchhHHHHHHHhh
Q psy160 168 PSI----------YRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 168 ~~~----------y~g~~~~~~~i~~fi~~ 187 (346)
.+. ..|.....+++.++++.
T Consensus 89 ~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~ 118 (142)
T 1qgv_A 89 HIMIDLGTGNNNKINWAMEDKQEMVDIIET 118 (142)
T ss_dssp EEEEECC------CCSCCSCHHHHHHHHHH
T ss_pred EEEEecCCCCcceeeeecCcHHHHHHHHHH
Confidence 543 33444323466666654
No 151
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.54 E-value=1.1e-14 Score=112.99 Aligned_cols=88 Identities=16% Similarity=0.232 Sum_probs=75.1
Q ss_pred cCcEEEccHHHHHH-HHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 191 EDRIELITRVMLET-MVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 191 ~~~v~~l~~~~~~~-~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
|+.+..++.++|++ +++++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|+++||++
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 45677899999965 677889999999999999999999999999999986 7889888 578899999999999999
Q ss_pred EEeCCe-EEEeecC
Q psy160 267 YFRNGN-PLIFEGE 279 (346)
Q Consensus 267 ~~~~g~-~~~y~g~ 279 (346)
+|++|. ...+.|.
T Consensus 81 ~~~~~~~~~~~~g~ 94 (122)
T 3aps_A 81 LYQYERAKKSIWEE 94 (122)
T ss_dssp EEEEEGGGTEEEEE
T ss_pred EEeCCCccceeecc
Confidence 997653 3345554
No 152
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.54 E-value=1.1e-14 Score=113.68 Aligned_cols=102 Identities=13% Similarity=0.178 Sum_probs=80.6
Q ss_pred ceeecCHHHHH-----HHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-----ChhhHHhhCCCCc
Q psy160 88 EIEEVNRRMLD-----KLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-----DPRYARKWGVTKL 157 (346)
Q Consensus 88 ~v~~l~~~~~~-----~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-----~~~l~~~~~i~~~ 157 (346)
.+..++.++++ ....++++++|.||++||++|+.+.|.+.++++.+. .++.++.++ +..++++|+|.++
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d~~~~~~~~~~v~~~ 83 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEEKNIDLAYKYDANIV 83 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSSHHHHHHHHTTCCSS
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCCchHHHHHHcCCcce
Confidence 34455555555 444567899999999999999999999999999885 236666554 6689999999999
Q ss_pred ceEEEEe-cCC-cceecCCcchhHHHHHHHhhcccc
Q psy160 158 PAVVYFR-HRF-PSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 158 Ptl~~~~-~g~-~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
||+++|. +|+ ...+.|..+.+ ++.+++.+...+
T Consensus 84 Pt~~~~~~~G~~~~~~~G~~~~~-~l~~~l~~~~~~ 118 (126)
T 2l57_A 84 PTTVFLDKEGNKFYVHQGLMRKN-NIETILNSLGVK 118 (126)
T ss_dssp SEEEEECTTCCEEEEEESCCCHH-HHHHHHHHHCCC
T ss_pred eEEEEECCCCCEEEEecCCCCHH-HHHHHHHHHhcc
Confidence 9999999 787 44588988744 899999887654
No 153
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.54 E-value=2.7e-14 Score=111.55 Aligned_cols=83 Identities=17% Similarity=0.376 Sum_probs=73.7
Q ss_pred EEEccH-HHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEe
Q psy160 194 IELITR-VMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 194 v~~l~~-~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~ 269 (346)
+..++. ++|+++++.+++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|.++||+++|+
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~ 98 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQLPTFIIAR 98 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCcccEEEEEe
Confidence 556776 9999988888999999999999999999999999999985 5888888 578899999999999999999
Q ss_pred CCeEE-Eeec
Q psy160 270 NGNPL-IFEG 278 (346)
Q Consensus 270 ~g~~~-~y~g 278 (346)
+|+.+ .+.|
T Consensus 99 ~G~~~~~~~G 108 (125)
T 1r26_A 99 SGKMLGHVIG 108 (125)
T ss_dssp TTEEEEEEES
T ss_pred CCeEEEEEeC
Confidence 99865 4677
No 154
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.54 E-value=7.2e-15 Score=115.30 Aligned_cols=90 Identities=17% Similarity=0.333 Sum_probs=78.3
Q ss_pred CcEEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 192 DRIELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 192 ~~v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
+.+..++.++|++. .+++++++|.||++||++|+.+.|.++++++.+.+ .+.++.+ .+.+++++|+|+++||+++
T Consensus 17 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 95 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTIKI 95 (130)
T ss_dssp SSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEEEE
T ss_pred CCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEEEE
Confidence 46778999999984 56788999999999999999999999999999886 6888888 5788999999999999999
Q ss_pred EeCCe--EEEeecCccc
Q psy160 268 FRNGN--PLIFEGENKI 282 (346)
Q Consensus 268 ~~~g~--~~~y~g~~~~ 282 (346)
|++|. ...|.|.++.
T Consensus 96 ~~~~~~~~~~~~G~~~~ 112 (130)
T 2dml_A 96 FGANKNKPEDYQGGRTG 112 (130)
T ss_dssp ESSCTTSCEECCSCCSH
T ss_pred EeCCCCeEEEeecCCCH
Confidence 98765 5678887753
No 155
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.54 E-value=4.1e-14 Score=109.34 Aligned_cols=99 Identities=19% Similarity=0.416 Sum_probs=81.8
Q ss_pred cCcEEEccHHHHHH-HHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 191 EDRIELITRVMLET-MVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 191 ~~~v~~l~~~~~~~-~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
...+..++.+++.+ +++++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .++.++++|+|.++||++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 89 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPETARNFQVVSIPTLI 89 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 34667889999987 466788999999999999999999999999999875 6888888 578899999999999999
Q ss_pred EEeCCeEE-EeecCccccccchhhhhhh
Q psy160 267 YFRNGNPL-IFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 267 ~~~~g~~~-~y~g~~~~~~~~~~~~~i~ 293 (346)
+|++|+.+ .+.|..+.+. +..+++
T Consensus 90 ~~~~g~~~~~~~G~~~~~~---l~~~l~ 114 (121)
T 2i1u_A 90 LFKDGQPVKRIVGAKGKAA---LLRELS 114 (121)
T ss_dssp EEETTEEEEEEESCCCHHH---HHHHTC
T ss_pred EEECCEEEEEecCCCCHHH---HHHHHH
Confidence 99999864 5778765332 555554
No 156
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.54 E-value=2.8e-14 Score=108.68 Aligned_cols=88 Identities=14% Similarity=0.300 Sum_probs=75.2
Q ss_pred cCcEEEccHHHHHHHHh--ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE----cChhhhhhCCCccccE
Q psy160 191 EDRIELITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI----QDPQLAKRYSIKTFPA 264 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~--~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i----~~~~~~~~~~i~~~Pt 264 (346)
.+.+..++.++|++.+. .+++++|.||++||++|+.+.|.+.++++.+. ++.++.+ .+.+++++|+|+++||
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCcchHHHHHHcCCCeeeE
Confidence 34677899999999876 47899999999999999999999999999987 4777777 3578999999999999
Q ss_pred EEEEeCCeEE-EeecCc
Q psy160 265 LVYFRNGNPL-IFEGEN 280 (346)
Q Consensus 265 i~~~~~g~~~-~y~g~~ 280 (346)
++++++|+.+ .+.|..
T Consensus 82 ~~~~~~G~~~~~~~G~~ 98 (111)
T 2pu9_C 82 FKILKENSVVGEVTGAK 98 (111)
T ss_dssp EEEESSSSEEEEEESSC
T ss_pred EEEEeCCcEEEEEcCCC
Confidence 9999999865 466653
No 157
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.54 E-value=1.5e-14 Score=129.40 Aligned_cols=100 Identities=21% Similarity=0.396 Sum_probs=84.5
Q ss_pred cCcEEEccHHHHHHHHhc--cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEE
Q psy160 191 EDRIELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~--~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti 265 (346)
.+.|..+|.++|+++++. +++++|.||++||++|+.+.|.++++++++.+ ++.|+.+ .+++++++|+|+++||+
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 346789999999998764 78999999999999999999999999999986 6889988 67899999999999999
Q ss_pred EEEeCCeEE-EeecCccccccchhhhhhhc
Q psy160 266 VYFRNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 266 ~~~~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
++|++|+.+ .|.|..+.+. +..++..
T Consensus 85 ~~~~~G~~~~~~~g~~~~~~---l~~~l~~ 111 (287)
T 3qou_A 85 YLFQNGQPVDGFQGPQPEEA---IRALLDX 111 (287)
T ss_dssp EEEETTEEEEEEESCCCHHH---HHHHHHH
T ss_pred EEEECCEEEEEeeCCCCHHH---HHHHHHH
Confidence 999999865 4788765322 4455543
No 158
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.54 E-value=1.2e-12 Score=114.72 Aligned_cols=211 Identities=9% Similarity=0.070 Sum_probs=150.4
Q ss_pred ceeecC-HHHHHHHHhc-CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCCCcceEEEEec
Q psy160 88 EIEEVN-RRMLDKLLEE-NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRH 165 (346)
Q Consensus 88 ~v~~l~-~~~~~~~~~~-~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~~~Ptl~~~~~ 165 (346)
.+.+|+ .+++++++.+ ++.++|.|++++|. ...+.|.++|+.++.. +.|+.+.+.+++.+++++. |+|++|+.
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~---~~~~~F~~~A~~lr~~-~~F~~t~~~~v~~~~~v~~-p~ivlfk~ 81 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGVGD---PGYLQYQDAANTLRED-YKFHHTFSTEIAKFLKVSL-GKLVLMQP 81 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTT-CCEEEECCHHHHHHHTCCS-SEEEEECC
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCCCc---hHHHHHHHHHHhhhcC-cEEEEECcHHHHHHcCCCC-CeEEEEec
Confidence 788885 5899999988 89999999998754 6788999999998553 8899999999999999987 99999985
Q ss_pred --------CCcceecC--CcchhHHHHHHHhhccccCcEEEccHHHHHHHHhccceEEEEEEcC-CC---h-hhHHHHHH
Q psy160 166 --------RFPSIYRG--DLSEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAVYFYKL-NC---N-ICDQILEG 230 (346)
Q Consensus 166 --------g~~~~y~g--~~~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~-~c---~-~c~~~~~~ 230 (346)
.....|+| .++ .++|.+|+..+..| .+..++.+++..+.. .++.++.|+.+ .+ . ........
T Consensus 82 ~~~~~kfde~~~~y~g~~~~~-~~~l~~fi~~~~~P-lv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~~ 158 (250)
T 3ec3_A 82 EKFQSKYEPRMHVMDVQGSTE-ASAIKDYVVKHALP-LVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRNK 158 (250)
T ss_dssp GGGCCTTSCSCEEEECCTTSC-HHHHHHHHHHHSSC-TEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHHH
T ss_pred chhhccccccceeccCCCCCC-HHHHHHHHHHcCCC-ceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHHH
Confidence 33677885 666 44899999999887 777999999988764 66777777753 22 2 23557899
Q ss_pred HHHHHhhcCcCceEEEEE---cChhhhhhCCCcc--c-cEEEEEeC-CeEEEee-cCccccccchhhhhhhcc-CCCCCC
Q psy160 231 LEKVDDECDIYGIHMVKI---QDPQLAKRYSIKT--F-PALVYFRN-GNPLIFE-GENKILKGTYIGTYISTK-AFSLIP 301 (346)
Q Consensus 231 ~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~--~-Pti~~~~~-g~~~~y~-g~~~~~~~~~~~~~i~~~-~~~~~~ 301 (346)
+.++|++++ ++.|+.+ ......+.||+.. . |.++++.. ++...+. +..+. ..|..|++.- ...+-|
T Consensus 159 ~~~vAk~~k--ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~---~~i~~Fv~~~~~Gkl~p 233 (250)
T 3ec3_A 159 VLEVAKDFP--EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFDS---DALREFVMAFKKGKLKP 233 (250)
T ss_dssp HHHHHTTCT--TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCH---HHHHHHHHHHHTTCCCC
T ss_pred HHHHHHhhc--ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCceecCCcccCCH---HHHHHHHHHHHCCCccc
Confidence 999999998 6888888 3455678889863 4 46766643 3333344 33432 2266666643 334556
Q ss_pred cccCCCCCCc
Q psy160 302 FCFSEKHPGA 311 (346)
Q Consensus 302 ~~~~~~~~~~ 311 (346)
.+-++..|+.
T Consensus 234 ~~kSepiPe~ 243 (250)
T 3ec3_A 234 VIKSQPVPKN 243 (250)
T ss_dssp CC--------
T ss_pred eeecCCCCCC
Confidence 6666666654
No 159
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.54 E-value=6.9e-14 Score=105.17 Aligned_cols=82 Identities=15% Similarity=0.406 Sum_probs=71.8
Q ss_pred EccHHHHHHHHh--ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeC
Q psy160 196 LITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 196 ~l~~~~~~~~~~--~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~ 270 (346)
..+.+++++.++ ++++++|.||++||++|+.+.|.++++++.+.+ +.++.+ .+++++++|+|+++||+++|++
T Consensus 5 i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (105)
T 3m9j_A 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASESEVKSMPTFQFFKK 82 (105)
T ss_dssp CCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTCHHHHHHTTCCBSSEEEEEET
T ss_pred cCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhhHHHHHHcCCCcCcEEEEEEC
Confidence 346788998877 688999999999999999999999999999874 788887 6789999999999999999999
Q ss_pred CeEE-EeecC
Q psy160 271 GNPL-IFEGE 279 (346)
Q Consensus 271 g~~~-~y~g~ 279 (346)
|+.+ .+.|.
T Consensus 83 g~~~~~~~g~ 92 (105)
T 3m9j_A 83 GQKVGEFSGA 92 (105)
T ss_dssp TEEEEEEESS
T ss_pred CeEEEEEeCC
Confidence 9865 46676
No 160
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.53 E-value=3.6e-14 Score=112.32 Aligned_cols=101 Identities=15% Similarity=0.181 Sum_probs=81.1
Q ss_pred cCceeecCHHHHHHHHhcC---CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCCCcceEEE
Q psy160 86 KNEIEEVNRRMLDKLLEEN---EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVY 162 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~---~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~~~Ptl~~ 162 (346)
.+.+.+++.++|++.+.+. ++++|.||++||++|+.+.|.|+++++.+. ++.|+.+|..+..++|+|.++||+++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~~~~~i~~~Pt~~~ 86 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCIEHYHDNCLPTIFV 86 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSCSSCCSSCCSEEEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCcccCCCCCCCEEEE
Confidence 3478889999999988653 579999999999999999999999999874 48888887544458999999999999
Q ss_pred EecCCc-ceecCCc------chhHHHHHHHhhc
Q psy160 163 FRHRFP-SIYRGDL------SEEEEVLQWLITQ 188 (346)
Q Consensus 163 ~~~g~~-~~y~g~~------~~~~~i~~fi~~~ 188 (346)
|++|+. ..+.|.. ...+.|..++.+.
T Consensus 87 ~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 87 YKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp ESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 999984 3466653 1244788887765
No 161
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.53 E-value=5.1e-14 Score=108.05 Aligned_cols=82 Identities=21% Similarity=0.424 Sum_probs=71.8
Q ss_pred ccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeCCeE
Q psy160 197 ITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNP 273 (346)
Q Consensus 197 l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~ 273 (346)
.+.++++++++++++++|.||++||++|+.+.|.++++++++.+ +.++.+ .+++++++|+|.++||++++++|+.
T Consensus 18 ~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 95 (114)
T 2oe3_A 18 TNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQL 95 (114)
T ss_dssp CSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEE
T ss_pred CCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCcccEEEEEeCCeE
Confidence 35677888888899999999999999999999999999999874 778877 5778999999999999999999986
Q ss_pred E-EeecCc
Q psy160 274 L-IFEGEN 280 (346)
Q Consensus 274 ~-~y~g~~ 280 (346)
+ .+.|..
T Consensus 96 ~~~~~G~~ 103 (114)
T 2oe3_A 96 IGKIIGAN 103 (114)
T ss_dssp EEEEESSC
T ss_pred EEEEeCCC
Confidence 4 467765
No 162
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.53 E-value=3e-14 Score=122.62 Aligned_cols=91 Identities=26% Similarity=0.449 Sum_probs=80.2
Q ss_pred cCcEEEccHHHHHH-HHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEE
Q psy160 191 EDRIELITRVMLET-MVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALV 266 (346)
Q Consensus 191 ~~~v~~l~~~~~~~-~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~ 266 (346)
...+..+|.++|++ +++++++++|.||++||++|+.+.|.++++++.+.+ .+.++.+ .+++++++|+|.++||++
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 89 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLL 89 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCTTTGGGGTCCSBSEEE
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCCHHHHHHcCCCcCCEEE
Confidence 35677899999988 577889999999999999999999999999999986 6888888 677899999999999999
Q ss_pred EEeCCeEE-EeecCccc
Q psy160 267 YFRNGNPL-IFEGENKI 282 (346)
Q Consensus 267 ~~~~g~~~-~y~g~~~~ 282 (346)
+|++|+.+ .+.|..+.
T Consensus 90 ~~~~G~~~~~~~G~~~~ 106 (222)
T 3dxb_A 90 LFKNGEVAATKVGALSK 106 (222)
T ss_dssp EEETTEEEEEEESCCCH
T ss_pred EEECCeEEEEeccccCh
Confidence 99999865 67887653
No 163
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.53 E-value=8.2e-14 Score=107.95 Aligned_cols=88 Identities=13% Similarity=0.296 Sum_probs=76.0
Q ss_pred cCcEEEccHHHHHHHHh----ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCcccc
Q psy160 191 EDRIELITRVMLETMVE----ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFP 263 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~----~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~P 263 (346)
.+.+..++.++|++.+. .+++++|.||++||++|+.+.|.++++++.+.+ +.++.+ .+++++++|+|+++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~P 89 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELKPIAEQFSVEAMP 89 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCHHHHHHcCCCccc
Confidence 34677889999998765 478999999999999999999999999999874 778887 578899999999999
Q ss_pred EEEEEeCCeEE-EeecCc
Q psy160 264 ALVYFRNGNPL-IFEGEN 280 (346)
Q Consensus 264 ti~~~~~g~~~-~y~g~~ 280 (346)
|++++++|+.+ .+.|..
T Consensus 90 t~~~~~~G~~~~~~~G~~ 107 (122)
T 2vlu_A 90 TFLFMKEGDVKDRVVGAI 107 (122)
T ss_dssp EEEEEETTEEEEEEESSC
T ss_pred EEEEEeCCEEEEEEeCcC
Confidence 99999999864 477766
No 164
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.53 E-value=8.2e-14 Score=110.63 Aligned_cols=98 Identities=11% Similarity=0.227 Sum_probs=80.2
Q ss_pred ceeec-CHHHHHHHHh----cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcce
Q psy160 88 EIEEV-NRRMLDKLLE----ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 159 (346)
Q Consensus 88 ~v~~l-~~~~~~~~~~----~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Pt 159 (346)
.+..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+.+ +.++.+| ++.++++|+|.++||
T Consensus 25 ~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~--v~~~~v~~~~~~~~~~~~~v~~~Pt 102 (139)
T 3d22_A 25 NVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPS--LMFLVIDVDELSDFSASWEIKATPT 102 (139)
T ss_dssp TCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTSHHHHHHTTCCEESE
T ss_pred cEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEeCcccHHHHHHcCCCcccE
Confidence 45555 5899998874 478999999999999999999999999998743 6666664 778999999999999
Q ss_pred EEEEecCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 160 VVYFRHRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 160 l~~~~~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
++++++|+. ..+.|. + .+++.+++.+..
T Consensus 103 ~~~~~~G~~~~~~~G~-~-~~~l~~~l~~~~ 131 (139)
T 3d22_A 103 FFFLRDGQQVDKLVGA-N-KPELHKKITAIL 131 (139)
T ss_dssp EEEEETTEEEEEEESC-C-HHHHHHHHHHHH
T ss_pred EEEEcCCeEEEEEeCC-C-HHHHHHHHHHHh
Confidence 999988884 457787 4 447888887654
No 165
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.53 E-value=6.7e-14 Score=107.68 Aligned_cols=82 Identities=21% Similarity=0.454 Sum_probs=71.3
Q ss_pred EEEccH-HHHHHHHh--ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 194 IELITR-VMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 194 v~~l~~-~~~~~~~~--~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
+..++. +++++.++ .+++++|.||++||++|+.+.|.++++++.+ ++.++.+ .+++++++|+|+++||+++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 667776 89999877 6889999999999999999999999999887 5777777 5778999999999999999
Q ss_pred EeCCeEE-Eeec
Q psy160 268 FRNGNPL-IFEG 278 (346)
Q Consensus 268 ~~~g~~~-~y~g 278 (346)
+++|+.+ .+.|
T Consensus 92 ~~~G~~~~~~~G 103 (117)
T 2xc2_A 92 IKNGEKVGDVVG 103 (117)
T ss_dssp EETTEEEEEEES
T ss_pred EeCCcEEEEEeC
Confidence 9999865 4667
No 166
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.52 E-value=3.6e-14 Score=108.12 Aligned_cols=95 Identities=20% Similarity=0.391 Sum_probs=76.7
Q ss_pred EEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeC
Q psy160 194 IELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 194 v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~ 270 (346)
+..++.++| +.+.++++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|.++||+++|++
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 81 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFERVPTLVFIRD 81 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEES
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcccCEEEEEEC
Confidence 446778889 666777899999999999999999999999999876 5677776 6788999999999999999999
Q ss_pred CeEE-EeecCccccccchhhhhhhc
Q psy160 271 GNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 271 g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
|+.+ ++.|..+.+. +..++..
T Consensus 82 G~~v~~~~G~~~~~~---l~~~~~~ 103 (110)
T 2l6c_A 82 GKVAKVFSGIMNPRE---LQALYAS 103 (110)
T ss_dssp SSEEEEEESCCCHHH---HHHHHHT
T ss_pred CEEEEEEcCCCCHHH---HHHHHHH
Confidence 9864 5778665332 5455443
No 167
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.51 E-value=1e-13 Score=103.98 Aligned_cols=81 Identities=23% Similarity=0.570 Sum_probs=70.1
Q ss_pred EccH-HHHHHHHh--ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEe
Q psy160 196 LITR-VMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 196 ~l~~-~~~~~~~~--~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~ 269 (346)
.++. +++++.++ ++++++|.||++||++|+.+.|.+.++++.+. ++.++.+ .+++++++|+|.++||+++++
T Consensus 3 ~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 3 VLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp ECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 4444 88998877 68899999999999999999999999999986 5778877 578899999999999999999
Q ss_pred CCeEEE-eec
Q psy160 270 NGNPLI-FEG 278 (346)
Q Consensus 270 ~g~~~~-y~g 278 (346)
+|+.+. +.|
T Consensus 81 ~g~~~~~~~G 90 (104)
T 2vim_A 81 DGKEVDRFSG 90 (104)
T ss_dssp TTEEEEEEES
T ss_pred CCcEEEEEeC
Confidence 998654 566
No 168
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.51 E-value=7.9e-14 Score=108.40 Aligned_cols=88 Identities=15% Similarity=0.343 Sum_probs=75.2
Q ss_pred cCcEEEccHHHHHHHHh--ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE----cChhhhhhCCCccccE
Q psy160 191 EDRIELITRVMLETMVE--ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI----QDPQLAKRYSIKTFPA 264 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~--~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i----~~~~~~~~~~i~~~Pt 264 (346)
.+.+..++.+++++.++ ++++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|+++||
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCcchHHHHHHcCCCeeeE
Confidence 45677899999998766 57899999999999999999999999999987 4777777 3578999999999999
Q ss_pred EEEEeCCeEE-EeecCc
Q psy160 265 LVYFRNGNPL-IFEGEN 280 (346)
Q Consensus 265 i~~~~~g~~~-~y~g~~ 280 (346)
++++++|+.+ .+.|..
T Consensus 95 ~~~~~~G~~~~~~~G~~ 111 (124)
T 1faa_A 95 FKILKENSVVGEVTGAK 111 (124)
T ss_dssp EEEEETTEEEEEEESSC
T ss_pred EEEEeCCcEEEEEcCCC
Confidence 9999999865 466754
No 169
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.51 E-value=2e-14 Score=112.62 Aligned_cols=91 Identities=16% Similarity=0.363 Sum_probs=73.9
Q ss_pred HHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeCCeEE-
Q psy160 199 RVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPL- 274 (346)
Q Consensus 199 ~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~~- 274 (346)
.+.++....++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+++++++|+|+++||+++|++|+.+
T Consensus 32 ~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~ 110 (128)
T 3ul3_B 32 SNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLA 110 (128)
T ss_dssp CSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEE
T ss_pred ccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEE
Confidence 333444556788999999999999999999999999999985 7889888 67899999999999999999999865
Q ss_pred EeecCccccccchhhhhhh
Q psy160 275 IFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 275 ~y~g~~~~~~~~~~~~~i~ 293 (346)
.+.|..+.+. +..+++
T Consensus 111 ~~~G~~~~~~---l~~~l~ 126 (128)
T 3ul3_B 111 RKDHFVSSND---LIALIK 126 (128)
T ss_dssp EESSCCCHHH---HHHHHT
T ss_pred EecCCCCHHH---HHHHHH
Confidence 4677665332 545543
No 170
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.51 E-value=2.2e-14 Score=112.92 Aligned_cols=102 Identities=16% Similarity=0.416 Sum_probs=81.3
Q ss_pred cCcEEEccHHHHHHHHh-ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc-CceEEEEE---cChhhhhhCCCccccEE
Q psy160 191 EDRIELITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI---QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~-~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i---~~~~~~~~~~i~~~Pti 265 (346)
.+.+..++.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+.+ .++.++.+ .+..++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEE
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEE
Confidence 45677899999988655 588999999999999999999999999999873 26899988 46678889999999999
Q ss_pred EEEeCCe---EEEeecC-ccccccchhhhhhhcc
Q psy160 266 VYFRNGN---PLIFEGE-NKILKGTYIGTYISTK 295 (346)
Q Consensus 266 ~~~~~g~---~~~y~g~-~~~~~~~~~~~~i~~~ 295 (346)
++|++|. .+.|.|+ ++.+. +..++...
T Consensus 86 ~~~~~g~~~~~~~~~gg~~~~~~---l~~~l~~~ 116 (133)
T 2dj3_A 86 YFAPSGDKKNPIKFEGGNRDLEH---LSKFIDEH 116 (133)
T ss_dssp EEECTTCTTSCEECCSSCCSTTH---HHHHHHHH
T ss_pred EEEeCCCcccceEecCCCcCHHH---HHHHHHHh
Confidence 9998874 4568844 54222 55555543
No 171
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.50 E-value=1.6e-14 Score=112.48 Aligned_cols=97 Identities=24% Similarity=0.429 Sum_probs=75.5
Q ss_pred cEEEccHHHHHH-HHhccceEEEEEEcCCCh--------------hhHHHHHHHHHHHhhcCcCceEEEEE---cChhhh
Q psy160 193 RIELITRVMLET-MVEETQYLAVYFYKLNCN--------------ICDQILEGLEKVDDECDIYGIHMVKI---QDPQLA 254 (346)
Q Consensus 193 ~v~~l~~~~~~~-~~~~~~~~lv~F~~~~c~--------------~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~ 254 (346)
.+..++.++|++ +++++++++|.||++||+ +|+.+.|.++++++.+.+ ++.++.+ .+++++
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTA 82 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTTTG
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHH
Confidence 466889999986 467789999999999999 999999999999999876 6888888 678899
Q ss_pred hhCCCccccEEEEEeCCeEE-EeecCccccccchhhhhhh
Q psy160 255 KRYSIKTFPALVYFRNGNPL-IFEGENKILKGTYIGTYIS 293 (346)
Q Consensus 255 ~~~~i~~~Pti~~~~~g~~~-~y~g~~~~~~~~~~~~~i~ 293 (346)
++|+|+++||+++|++|+.+ .+.|..+.+. +..+++
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~---l~~~l~ 119 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQ---LKEFLD 119 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCCHHH---HHHHHT
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCCHHH---HHHHHH
Confidence 99999999999999999864 5788765332 555554
No 172
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.50 E-value=7.6e-14 Score=110.15 Aligned_cols=99 Identities=12% Similarity=0.178 Sum_probs=79.9
Q ss_pred cCceeecC-HHHHHHHHhcC--CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcce
Q psy160 86 KNEIEEVN-RRMLDKLLEEN--EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPA 159 (346)
Q Consensus 86 ~~~v~~l~-~~~~~~~~~~~--~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Pt 159 (346)
...+.+++ .+++++++.+. ++++|.||++||++|+.+.|.|+++++.+ ++.++.+| +..++++|+|.++||
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 95 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKALPT 95 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCCCCE
Confidence 34677777 48999988764 58999999999999999999999998876 36677665 678999999999999
Q ss_pred EEEEe--cCC---cceecCCcchhHHHHHHHhhcc
Q psy160 160 VVYFR--HRF---PSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 160 l~~~~--~g~---~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
+++|+ +|+ ...+.|. + .++|.+++.+..
T Consensus 96 ~~~~~~~~g~g~~~~~~~G~-~-~~~l~~~l~~~l 128 (133)
T 3cxg_A 96 FEFYFNLNNEWVLVHTVEGA-N-QNDIEKAFQKYC 128 (133)
T ss_dssp EEEEEEETTEEEEEEEEESC-C-HHHHHHHHHHHS
T ss_pred EEEEEecCCCeEEEEEEcCC-C-HHHHHHHHHHHH
Confidence 99996 676 2357787 4 448999988754
No 173
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.50 E-value=9.9e-14 Score=110.37 Aligned_cols=89 Identities=25% Similarity=0.446 Sum_probs=64.2
Q ss_pred CcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEE
Q psy160 192 DRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYF 268 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~ 268 (346)
+.+..++.++|++.+..++.++|.||++||++|+.+.|.++++++.+.+ ++.|+.+ .+.+++++|+|.++||+++|
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCHHHHHHCCCCccCEEEEE
Confidence 3566788899988765444499999999999999999999999999986 6899988 57889999999999999999
Q ss_pred eCCeEE-EeecCcc
Q psy160 269 RNGNPL-IFEGENK 281 (346)
Q Consensus 269 ~~g~~~-~y~g~~~ 281 (346)
++|+.+ .+.|..+
T Consensus 112 ~~G~~~~~~~G~~~ 125 (140)
T 1v98_A 112 RRGAPVATWVGASP 125 (140)
T ss_dssp ETTEEEEEEESCCC
T ss_pred eCCcEEEEEeCCCC
Confidence 999854 4778765
No 174
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.50 E-value=2.4e-13 Score=105.92 Aligned_cols=85 Identities=15% Similarity=0.312 Sum_probs=72.3
Q ss_pred cEEEc-cHHHHHHHHhc----cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccE
Q psy160 193 RIELI-TRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPA 264 (346)
Q Consensus 193 ~v~~l-~~~~~~~~~~~----~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pt 264 (346)
.+..+ +.+++++.++. +++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+.+++++|+|.++||
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt 94 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELKSVASDWAIQAMPT 94 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred cEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHHcCCCccCE
Confidence 44455 77899887653 7899999999999999999999999999986 6888888 5788999999999999
Q ss_pred EEEEeCCeEEE-eecC
Q psy160 265 LVYFRNGNPLI-FEGE 279 (346)
Q Consensus 265 i~~~~~g~~~~-y~g~ 279 (346)
++++++|+.+. +.|.
T Consensus 95 ~~~~~~G~~~~~~~G~ 110 (124)
T 1xfl_A 95 FMFLKEGKILDKVVGA 110 (124)
T ss_dssp EEEEETTEEEEEEESC
T ss_pred EEEEECCEEEEEEeCC
Confidence 99999998653 5663
No 175
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.50 E-value=1.2e-13 Score=110.36 Aligned_cols=77 Identities=12% Similarity=0.181 Sum_probs=68.3
Q ss_pred cHHHHHHHH-h-ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeCCe
Q psy160 198 TRVMLETMV-E-ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGN 272 (346)
Q Consensus 198 ~~~~~~~~~-~-~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~ 272 (346)
+.++|++.+ + ++++++|.||++||++|+.+.|.++++++++.+ ++.++.+ .+++++++|+|+++||+++|++|+
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~ 88 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNK 88 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHHHHHHcCCCCCCEEEEEECCc
Confidence 678888754 4 588999999999999999999999999999975 6888888 577899999999999999999998
Q ss_pred EEE
Q psy160 273 PLI 275 (346)
Q Consensus 273 ~~~ 275 (346)
.+.
T Consensus 89 ~v~ 91 (142)
T 1qgv_A 89 HIM 91 (142)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 176
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.49 E-value=1.2e-12 Score=114.88 Aligned_cols=176 Identities=11% Similarity=0.163 Sum_probs=136.8
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcCChHHHHhcCCCCCCeEEEEeC--------Cceeee-cCCCCCHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKISDTEAAAKYNIINLPSLVYFRK--------QVPLLY-DGDLFDEE 71 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~~c~~~~i~~~Ptl~~f~~--------~~~~~y-~G~~~~~~ 71 (346)
|-|+++|| ....+.|.++|+.+.. .+.|+.+.+.+++.+|++++ |++++|++ ..+..| .|..+. +
T Consensus 29 vgff~~~~---~~~~~~f~~~A~~lr~-~~~F~~~~~~~v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~-~ 102 (252)
T 2h8l_A 29 VGFFDDSF---SEAHSEFLKAASNLRD-NYRFAHTNVESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTS-G 102 (252)
T ss_dssp EEEESCTT---SHHHHHHHHHHHHTTT-TSCEEEECCHHHHHHHCSSS-EEEEEECCGGGCCTTSCSEEECCCSSCCH-H
T ss_pred EEEECCCC---ChHHHHHHHHHHhccc-CcEEEEEChHHHHHHhCCCC-CcEEEEcchhhcccccccccccCCCCcCH-H
Confidence 35778885 4667789999999832 47888888999999999998 99999985 356789 998744 6
Q ss_pred HHHHHHhccCCccccCceeecCHHHHHHHHhcCCcEEEEEECCCChh----HHHHHHHHHHHHhhccC--CCcEEEEeC-
Q psy160 72 KILTWLTSQDVFEIKNEIEEVNRRMLDKLLEENEFVTVFFYETDHKD----SVKVLERLEKIDGETDN--MDITFVKMA- 144 (346)
Q Consensus 72 ~i~~~i~~~~~p~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~----c~~~~~~~~~~a~~~~~--~~i~~~~~~- 144 (346)
+|.+|+..+..| .|.++|.+++..+ .+.++++.|+.+.+.. ...+...+.++|+.+++ ..+.|+.+|
T Consensus 103 ~l~~fi~~~~~P----lv~e~t~~n~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~ 176 (252)
T 2h8l_A 103 KIKKFIQENIFG----ICPHMTEDNKDLI--QGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASR 176 (252)
T ss_dssp HHHHHHHHHSSC----SSCEECTTTHHHH--SSSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEET
T ss_pred HHHHHHHhcccC----CeeecccccHhhh--cCCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEch
Confidence 999999999999 9999999999986 3456778888654322 22588889999999953 247777766
Q ss_pred --ChhhHHhhCC----CCcceEEEEec-CCcceecCCcchhHH--HHHHHhhcc
Q psy160 145 --DPRYARKWGV----TKLPAVVYFRH-RFPSIYRGDLSEEEE--VLQWLITQK 189 (346)
Q Consensus 145 --~~~l~~~~~i----~~~Ptl~~~~~-g~~~~y~g~~~~~~~--i~~fi~~~~ 189 (346)
...+++.||+ ..+|+++++.. +..+.+.+..+.+ + |.+|+.+..
T Consensus 177 ~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~-~~~i~~F~~~~~ 229 (252)
T 2h8l_A 177 KTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRD-GKALERFLQDYF 229 (252)
T ss_dssp TTTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTT-SHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcc-hHHHHHHHHHHH
Confidence 5678889999 36899999854 4455566766644 6 999998854
No 177
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.49 E-value=9e-14 Score=107.76 Aligned_cols=85 Identities=20% Similarity=0.406 Sum_probs=73.4
Q ss_pred EEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeCC
Q psy160 195 ELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNG 271 (346)
Q Consensus 195 ~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g 271 (346)
...+.++|+++++++++++|.||++||++|+.+.|.++++++.+.+.++.++.+ .+++++++|+|.++||+++|++|
T Consensus 19 ~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G 98 (121)
T 2j23_A 19 VISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNG 98 (121)
T ss_dssp ECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETT
T ss_pred EcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECC
Confidence 334569999988888999999999999999999999999999887523888888 57889999999999999999999
Q ss_pred eEE-EeecC
Q psy160 272 NPL-IFEGE 279 (346)
Q Consensus 272 ~~~-~y~g~ 279 (346)
+.+ .+.|.
T Consensus 99 ~~~~~~~G~ 107 (121)
T 2j23_A 99 QKIDTVVGA 107 (121)
T ss_dssp EEEEEEESS
T ss_pred eEEeeEcCC
Confidence 864 46776
No 178
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.48 E-value=6.9e-14 Score=119.68 Aligned_cols=101 Identities=15% Similarity=0.202 Sum_probs=82.5
Q ss_pred cCceeec-CHHHHHHHHhcC---CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--ChhhHHhhCCCCcce
Q psy160 86 KNEIEEV-NRRMLDKLLEEN---EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--DPRYARKWGVTKLPA 159 (346)
Q Consensus 86 ~~~v~~l-~~~~~~~~~~~~---~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--~~~l~~~~~i~~~Pt 159 (346)
.+.|.++ +.++|.+.+.+. ++++|.||++||++|+.+.|.|.++++.+. ++.|+.++ ++.++.+|+|.++||
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRASNTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHHHHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECCcHHHHHHCCCCCCCE
Confidence 4568888 899999988654 789999999999999999999999999875 47777765 556889999999999
Q ss_pred EEEEecCCc-ceecCCcch------hHHHHHHHhhc
Q psy160 160 VVYFRHRFP-SIYRGDLSE------EEEVLQWLITQ 188 (346)
Q Consensus 160 l~~~~~g~~-~~y~g~~~~------~~~i~~fi~~~ 188 (346)
+++|++|+. ..+.|.... .+.|..|+.+.
T Consensus 176 l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999884 457776552 24677777654
No 179
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.47 E-value=2e-13 Score=107.94 Aligned_cols=98 Identities=16% Similarity=0.232 Sum_probs=76.7
Q ss_pred cCcEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE----------cChhhhhhCCCc
Q psy160 191 EDRIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI----------QDPQLAKRYSIK 260 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i----------~~~~~~~~~~i~ 260 (346)
++.+..++.++|++.+++ +++|.||++||++|+.+.|.+.++++.+. ..+..+.+ .+++++++|+|.
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 456778899999998877 99999999999999999999999999876 23333333 246789999999
Q ss_pred cccEEEEEeCCeEE-EeecCccccccchhhhhhhc
Q psy160 261 TFPALVYFRNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 261 ~~Pti~~~~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
++||+++|++|+.+ .+.|..+.+. +..+++.
T Consensus 92 ~~Pt~~~~~~G~~v~~~~G~~~~~~---~~~~i~~ 123 (135)
T 3emx_A 92 GTPTLVFYKEGRIVDKLVGATPWSL---KVEKARE 123 (135)
T ss_dssp SSSEEEEEETTEEEEEEESCCCHHH---HHHHHHH
T ss_pred eeCeEEEEcCCEEEEEEeCCCCHHH---HHHHHHH
Confidence 99999999999854 4678765332 4444443
No 180
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.47 E-value=3.4e-13 Score=102.72 Aligned_cols=83 Identities=14% Similarity=0.334 Sum_probs=71.4
Q ss_pred EEEc-cHHHHHHHHhc----cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEE
Q psy160 194 IELI-TRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 194 v~~l-~~~~~~~~~~~----~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti 265 (346)
+..+ +.+++++.++. +++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|.++|++
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 83 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEAMPTF 83 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSSTTEE
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCcccEE
Confidence 4444 77999987664 7899999999999999999999999999986 6888888 57789999999999999
Q ss_pred EEEeCCeEEE-eec
Q psy160 266 VYFRNGNPLI-FEG 278 (346)
Q Consensus 266 ~~~~~g~~~~-y~g 278 (346)
+++++|+.+. +.|
T Consensus 84 ~~~~~G~~~~~~~g 97 (113)
T 1ti3_A 84 IFLKDGKLVDKTVG 97 (113)
T ss_dssp EEEETTEEEEEEEC
T ss_pred EEEeCCEEEEEEec
Confidence 9999998654 556
No 181
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.47 E-value=2.1e-13 Score=105.21 Aligned_cols=86 Identities=21% Similarity=0.405 Sum_probs=72.8
Q ss_pred EEEc--cHHHHHH-HHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEE
Q psy160 194 IELI--TRVMLET-MVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVY 267 (346)
Q Consensus 194 v~~l--~~~~~~~-~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~ 267 (346)
+..+ +.++|++ +.+++++++|.||++||++|+.+.|.++++++.+ + ++.++.+ .+++++++|+|.++||+++
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKNGNAADAYGVSSIPALFF 82 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 4455 6788985 5567889999999999999999999999999998 3 7888888 5788999999999999999
Q ss_pred EeC----CeEE-EeecCcc
Q psy160 268 FRN----GNPL-IFEGENK 281 (346)
Q Consensus 268 ~~~----g~~~-~y~g~~~ 281 (346)
|++ |+.+ ++.|...
T Consensus 83 ~~~~~~~G~~~~~~~G~~~ 101 (118)
T 2f51_A 83 VKKEGNEIKTLDQFVGADV 101 (118)
T ss_dssp EEEETTEEEEEEEEESCCH
T ss_pred EeCCCCcceEEEeecCCCH
Confidence 988 7754 4677764
No 182
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.47 E-value=3.4e-14 Score=109.89 Aligned_cols=98 Identities=15% Similarity=0.406 Sum_probs=78.3
Q ss_pred CcEEEccHHHHHHHH-hccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc----CceEEEEE--cChhhhhhCCCccccE
Q psy160 192 DRIELITRVMLETMV-EETQYLAVYFYKLNCNICDQILEGLEKVDDECDI----YGIHMVKI--QDPQLAKRYSIKTFPA 264 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~-~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~----~~i~~~~i--~~~~~~~~~~i~~~Pt 264 (346)
+.+..++.++|++.+ .++++++|.||++||++|+.+.|.|+++++.+.+ .++.++.+ +...+++ +|+++||
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~--~v~~~Pt 84 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD--EIQGFPT 84 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS--CCSSSSE
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc--ccCcCCe
Confidence 467788999999874 6788999999999999999999999999999874 25888888 3334665 9999999
Q ss_pred EEEEeCC-e--EEEeecCccccccchhhhhhhc
Q psy160 265 LVYFRNG-N--PLIFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 265 i~~~~~g-~--~~~y~g~~~~~~~~~~~~~i~~ 294 (346)
+++|++| + ...|.|.++.+. +..+++.
T Consensus 85 ~~~~~~~~~~~~~~~~G~~~~~~---l~~~i~~ 114 (121)
T 2djj_A 85 IKLYPAGAKGQPVTYSGSRTVED---LIKFIAE 114 (121)
T ss_dssp EEEECSSCTTSCCCCCCCSCHHH---HHHHHHH
T ss_pred EEEEeCcCCCCceEecCCCCHHH---HHHHHHh
Confidence 9999877 4 567888775332 5556554
No 183
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.47 E-value=4.5e-13 Score=105.69 Aligned_cols=99 Identities=13% Similarity=0.161 Sum_probs=85.5
Q ss_pred ceeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCC--cceEEE
Q psy160 88 EIEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTK--LPAVVY 162 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~--~Ptl~~ 162 (346)
.+.++|.++|++++.+..+++|.||++ |++|+.+.|.++++|+++++. +.|+.+| ++.++.+|||++ .||+++
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i 84 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFAI 84 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCCSSSSSEEEE
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHHHHHHcCCCcccCCEEEE
Confidence 788999999999988888999999999 899999999999999998653 8888876 678999999999 999999
Q ss_pred Eec--CCcceec--CCcchhHHHHHHHhhcc
Q psy160 163 FRH--RFPSIYR--GDLSEEEEVLQWLITQK 189 (346)
Q Consensus 163 ~~~--g~~~~y~--g~~~~~~~i~~fi~~~~ 189 (346)
|++ |+.+... |..+.+ .|.+|+.+..
T Consensus 85 ~~~~~g~~~~~~~~g~~~~~-~l~~fi~~~l 114 (133)
T 2djk_A 85 QEVAKNQKFPFDQEKEITFE-AIKAFVDDFV 114 (133)
T ss_dssp ECTTTCCBCCCCSSSCCCHH-HHHHHHHHHH
T ss_pred EecCcCcccCCCCccccCHH-HHHHHHHHHH
Confidence 997 6666654 888754 8999998754
No 184
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.46 E-value=4.7e-13 Score=102.80 Aligned_cols=85 Identities=15% Similarity=0.360 Sum_probs=71.8
Q ss_pred cEEEc-cHHHHHHHHhc----cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccE
Q psy160 193 RIELI-TRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPA 264 (346)
Q Consensus 193 ~v~~l-~~~~~~~~~~~----~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pt 264 (346)
.+..+ +.+++++.+.. +++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+++++++|+|+++|+
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt 84 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEAMPT 84 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSBSE
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCcCcE
Confidence 44455 67899887654 7899999999999999999999999999986 5777777 5778999999999999
Q ss_pred EEEEeCCeEEE-eecC
Q psy160 265 LVYFRNGNPLI-FEGE 279 (346)
Q Consensus 265 i~~~~~g~~~~-y~g~ 279 (346)
++++++|+.+. +.|.
T Consensus 85 ~~~~~~g~~~~~~~g~ 100 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVGG 100 (118)
T ss_dssp EEEEETTEEEEEEESC
T ss_pred EEEEeCCeEEEEecCC
Confidence 99999998654 5563
No 185
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.46 E-value=2.3e-13 Score=117.78 Aligned_cols=97 Identities=13% Similarity=0.383 Sum_probs=83.3
Q ss_pred CcEEEccHHHHHHHHhccceEEEEEEc--CCChhhHHHHHHHHHHHhhcCc-CceEEEEEc--------ChhhhhhCCCc
Q psy160 192 DRIELITRVMLETMVEETQYLAVYFYK--LNCNICDQILEGLEKVDDECDI-YGIHMVKIQ--------DPQLAKRYSIK 260 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~~~~~~lv~F~~--~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i~--------~~~~~~~~~i~ 260 (346)
..+..++.++|+++++++++++|.||+ |||+ +.|.|+++|+.+.+ .++.|++++ ++++|++|+|+
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 356789999999988888999999999 9998 99999999999863 369999995 68999999999
Q ss_pred --cccEEEEEeCCe---EEEeecCccccccchhhhhhhcc
Q psy160 261 --TFPALVYFRNGN---PLIFEGENKILKGTYIGTYISTK 295 (346)
Q Consensus 261 --~~Pti~~~~~g~---~~~y~g~~~~~~~~~~~~~i~~~ 295 (346)
++||+++|++|+ +..|.|.++.+. +..|++..
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~~---L~~fi~~~ 117 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVGA---IQRWLKGQ 117 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHHH---HHHHHHHT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHHH---HHHHHHHh
Confidence 999999999997 688999886433 66666654
No 186
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.19 E-value=5.5e-15 Score=111.20 Aligned_cols=97 Identities=16% Similarity=0.302 Sum_probs=79.4
Q ss_pred eeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEe
Q psy160 89 IEEVNRRMLDKLL-EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 89 v~~l~~~~~~~~~-~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~ 164 (346)
+.+++.+++++.+ .++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.++ +..++++|+|.++||+++|+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDENPNTAAQYGIRSIPTLLLFK 81 (106)
Confidence 6678888888655 5668999999999999999999999999988753 36666654 67899999999999999998
Q ss_pred cCC-cceecCCcchhHHHHHHHhh
Q psy160 165 HRF-PSIYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 165 ~g~-~~~y~g~~~~~~~i~~fi~~ 187 (346)
+|+ ...+.|..+.+ ++.+++.+
T Consensus 82 ~g~~~~~~~g~~~~~-~l~~~l~~ 104 (106)
T 2yj7_A 82 NGQVVDRLVGAQPKE-ALKERIDK 104 (106)
Confidence 887 44578877644 78888764
No 187
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.45 E-value=4.3e-13 Score=105.88 Aligned_cols=96 Identities=14% Similarity=0.157 Sum_probs=78.3
Q ss_pred ecCHHHHHHHHhc--CCcEEEEEECCCChhHHHHHHHH---HHHHhhccCCCcEEEEeC-------ChhhHHhhCCCCcc
Q psy160 91 EVNRRMLDKLLEE--NEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA-------DPRYARKWGVTKLP 158 (346)
Q Consensus 91 ~l~~~~~~~~~~~--~~~~lv~F~~~~C~~c~~~~~~~---~~~a~~~~~~~i~~~~~~-------~~~l~~~~~i~~~P 158 (346)
..+.++++..+.+ +++++|.||++||++|+.+.|.+ .++++.+.+ +.++.++ ...++++|+|.++|
T Consensus 16 ~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~~~l~~~~~v~~~P 93 (134)
T 2fwh_A 16 IKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALLKHLNVLGLP 93 (134)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHHHHTTCCSSS
T ss_pred ecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchHHHHHHHcCCCCCC
Confidence 3457888887764 68999999999999999999999 888888754 6666554 35799999999999
Q ss_pred eEEEE-ecCCc---ceecCCcchhHHHHHHHhhcc
Q psy160 159 AVVYF-RHRFP---SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 159 tl~~~-~~g~~---~~y~g~~~~~~~i~~fi~~~~ 189 (346)
|+++| ++|+. ..+.|..+.+ +|.+++.+..
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~-~l~~~l~~~~ 127 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAE-TFSAHLRDRQ 127 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHH-HHHHHHHHC-
T ss_pred EEEEECCCCCEeeeeeeeeccCHH-HHHHHHHhcC
Confidence 99999 78886 4789988844 8999987654
No 188
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.45 E-value=5.4e-13 Score=105.84 Aligned_cols=85 Identities=14% Similarity=0.276 Sum_probs=71.9
Q ss_pred cEEEccHHHHHHHHh----ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEE
Q psy160 193 RIELITRVMLETMVE----ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~----~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti 265 (346)
.+...+.++|++.+. .+++++|.||++||++|+.+.|.++++++.+. ++.++.+ .+.+++++|+|.++||+
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 103 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDELSDFSASWEIKATPTF 103 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCEESEE
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcccHHHHHHcCCCcccEE
Confidence 444446899988653 47899999999999999999999999999985 5788877 67889999999999999
Q ss_pred EEEeCCeEE-EeecC
Q psy160 266 VYFRNGNPL-IFEGE 279 (346)
Q Consensus 266 ~~~~~g~~~-~y~g~ 279 (346)
+++++|+.+ .+.|.
T Consensus 104 ~~~~~G~~~~~~~G~ 118 (139)
T 3d22_A 104 FFLRDGQQVDKLVGA 118 (139)
T ss_dssp EEEETTEEEEEEESC
T ss_pred EEEcCCeEEEEEeCC
Confidence 999999865 46676
No 189
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.45 E-value=3.1e-14 Score=113.57 Aligned_cols=97 Identities=10% Similarity=0.152 Sum_probs=67.2
Q ss_pred cEEEccHHHHHHHHhccceEEEEEEcCC--ChhhHHHHHHHHHHHhhcCcCceE--EEEE---cChhhhhhCCCccccEE
Q psy160 193 RIELITRVMLETMVEETQYLAVYFYKLN--CNICDQILEGLEKVDDECDIYGIH--MVKI---QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~--c~~c~~~~~~~~~la~~~~~~~i~--~~~i---~~~~~~~~~~i~~~Pti 265 (346)
.+..++.++|++++++++.++|.|+++| |++|+.+.|.|+++++++ + ++. ++++ .+++++++|+|+++||+
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHHHHHHHTTTCCSSSEE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCCHHHHHhcCCCcCCeE
Confidence 5668888999998888778889999877 999999999999999998 5 677 8888 57789999999999999
Q ss_pred EEEeCCeEE-EeecCccccccchhhhhhhc
Q psy160 266 VYFRNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 266 ~~~~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
++|++|+.+ ++.|.++.+. +..+++.
T Consensus 96 ~~fk~G~~v~~~~G~~~~~~---l~~~i~~ 122 (142)
T 2es7_A 96 LVFTDGKLRGALSGIHPWAE---LLTLMRS 122 (142)
T ss_dssp EEESCC----CEESCCCHHH---HHHHHHH
T ss_pred EEEeCCEEEEEEeCCCCHHH---HHHHHHH
Confidence 999999854 4788765322 5555544
No 190
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.44 E-value=3.2e-13 Score=106.81 Aligned_cols=87 Identities=15% Similarity=0.249 Sum_probs=71.0
Q ss_pred CcEEEccHHHHHHHHhc---cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEcChhhhhhCCCccccEEEEE
Q psy160 192 DRIELITRVMLETMVEE---TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRYSIKTFPALVYF 268 (346)
Q Consensus 192 ~~v~~l~~~~~~~~~~~---~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~~i~~~Pti~~~ 268 (346)
+.+..++.++|++.+.+ +++++|.||++||++|+.+.|.|+++++++. ++.|+.++-....++|+|.++||+++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~~~~~i~~~Pt~~~~ 87 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCIEHYHDNCLPTIFVY 87 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSCSSCCSSCCSEEEEE
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCcccCCCCCCCEEEEE
Confidence 45667799999987653 2689999999999999999999999999985 688999843333488999999999999
Q ss_pred eCCeEE-EeecCc
Q psy160 269 RNGNPL-IFEGEN 280 (346)
Q Consensus 269 ~~g~~~-~y~g~~ 280 (346)
++|+.+ .+.|..
T Consensus 88 ~~G~~v~~~~G~~ 100 (135)
T 2dbc_A 88 KNGQIEGKFIGII 100 (135)
T ss_dssp SSSSCSEEEESTT
T ss_pred ECCEEEEEEEeEE
Confidence 999743 456654
No 191
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.43 E-value=5.8e-14 Score=132.03 Aligned_cols=103 Identities=15% Similarity=0.179 Sum_probs=85.6
Q ss_pred cCceeecCHHHHHHHHhcC--CcEEEEEECCCChhHHHHHHHHHHHHhhccCC-------CcEEEEeC---ChhhHHhhC
Q psy160 86 KNEIEEVNRRMLDKLLEEN--EFVTVFFYETDHKDSVKVLERLEKIDGETDNM-------DITFVKMA---DPRYARKWG 153 (346)
Q Consensus 86 ~~~v~~l~~~~~~~~~~~~--~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~-------~i~~~~~~---~~~l~~~~~ 153 (346)
...|.+++.++|++++.++ ++++|.|||+||++|+.+.|.|+++++.+... .+.|+.+| ++++|++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 4579999999999988654 68999999999999999999999999998521 37888776 778999999
Q ss_pred CCCcceEEEEecCC---cceecCCcchhHHHHHHHhhccc
Q psy160 154 VTKLPAVVYFRHRF---PSIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 154 i~~~Ptl~~~~~g~---~~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
|.++||+++|.+|. +..|.|.++.+ .| .|+.+...
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e-~L-~fI~k~l~ 139 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLE-HV-AFENSHLE 139 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEE-EE-ECSCTTCC
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHH-HH-HHHHHhcC
Confidence 99999999998654 66799988754 56 77666543
No 192
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.43 E-value=4.3e-13 Score=116.54 Aligned_cols=97 Identities=16% Similarity=0.306 Sum_probs=82.1
Q ss_pred cCcEEEccHHHHHHHHhccceEEEEEE--cCCChhhHHHHHHHHHHHhhcCc--CceEEEEE---c-----ChhhhhhCC
Q psy160 191 EDRIELITRVMLETMVEETQYLAVYFY--KLNCNICDQILEGLEKVDDECDI--YGIHMVKI---Q-----DPQLAKRYS 258 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~~~lv~F~--~~~c~~c~~~~~~~~~la~~~~~--~~i~~~~i---~-----~~~~~~~~~ 258 (346)
++.+..++.++|+++++++++++|.|| ||||+ +.|.|+++|+.+.+ .++.|++| . ++++|++|+
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 456778999999998888899999999 99998 99999999999843 36999998 4 689999999
Q ss_pred Cc--cccEEEEEeCCe---EEEe--ecCccccccchhhhhhhcc
Q psy160 259 IK--TFPALVYFRNGN---PLIF--EGENKILKGTYIGTYISTK 295 (346)
Q Consensus 259 i~--~~Pti~~~~~g~---~~~y--~g~~~~~~~~~~~~~i~~~ 295 (346)
|+ ++||+++|+ |+ +..| .|.++.+. +..|++..
T Consensus 91 V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~---L~~fi~~~ 130 (248)
T 2c0g_A 91 VDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDN---LKAFVSAN 130 (248)
T ss_dssp CCTTSCCEEEEES-SSSSSEEECCTTSCCCHHH---HHHHHHHH
T ss_pred CCcCCCCeEEEEe-CCcCcceeecccCCCCHHH---HHHHHHHh
Confidence 99 999999999 87 5788 89886433 66666654
No 193
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.43 E-value=4.9e-13 Score=116.01 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=80.5
Q ss_pred cCceeec-CHHHHHHHHhc---CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--ChhhHHhhCCCCcce
Q psy160 86 KNEIEEV-NRRMLDKLLEE---NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--DPRYARKWGVTKLPA 159 (346)
Q Consensus 86 ~~~v~~l-~~~~~~~~~~~---~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--~~~l~~~~~i~~~Pt 159 (346)
.+.|.++ +.++|.+.+.. +++++|.||++||++|+.+.|.|.++++.+.. +.|+.++ ...++.+|+|.++||
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~~~l~~~~~I~~~PT 188 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASNTGAGDRFSSDVLPT 188 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHHHCCTTSSCTTTCSE
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCcHHHHHHCCCCCCCE
Confidence 4578888 79999998854 57899999999999999999999999998754 7777776 445889999999999
Q ss_pred EEEEecCCc-ceecCCcc------hhHHHHHHHhhc
Q psy160 160 VVYFRHRFP-SIYRGDLS------EEEEVLQWLITQ 188 (346)
Q Consensus 160 l~~~~~g~~-~~y~g~~~------~~~~i~~fi~~~ 188 (346)
+++|++|+. ..+.|... ..+.|..|+.+.
T Consensus 189 ll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 189 LLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp EEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 999999874 33444321 133677777765
No 194
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.43 E-value=3.3e-13 Score=105.71 Aligned_cols=101 Identities=13% Similarity=0.120 Sum_probs=78.3
Q ss_pred eeecCHHHHHHHH----hcCCcEEEEEECCCChhHHHHHHHH---HHHHhhccCCCcEEEEeC-----ChhhHHhhCCCC
Q psy160 89 IEEVNRRMLDKLL----EENEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA-----DPRYARKWGVTK 156 (346)
Q Consensus 89 v~~l~~~~~~~~~----~~~~~~lv~F~~~~C~~c~~~~~~~---~~~a~~~~~~~i~~~~~~-----~~~l~~~~~i~~ 156 (346)
...++..+|++.+ .++++++|.||++||++|+.+.|.+ ..+++.+.. ++.++.++ ...++++|+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~ 86 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELRKKYGVHA 86 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHHHHTTCCS
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHHHHcCCCC
Confidence 3445667777766 3678999999999999999999999 666665532 36666665 457999999999
Q ss_pred cceEEEE-ecCCc-ceecCCcchhHHHHHHHhhcccc
Q psy160 157 LPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 157 ~Ptl~~~-~~g~~-~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
+||++++ ++|+. ..+.|..+.+ ++.+++++...+
T Consensus 87 ~Pt~~~~d~~G~~~~~~~G~~~~~-~l~~~l~~~~~~ 122 (130)
T 2kuc_A 87 YPTLLFINSSGEVVYRLVGAEDAP-ELLKKVKLGVES 122 (130)
T ss_dssp SCEEEEECTTSCEEEEEESCCCHH-HHHHHHHHHHSC
T ss_pred CCEEEEECCCCcEEEEecCCCCHH-HHHHHHHHHHHh
Confidence 9999999 57874 4588887744 899999887654
No 195
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.42 E-value=6.2e-13 Score=104.89 Aligned_cols=113 Identities=19% Similarity=0.153 Sum_probs=88.1
Q ss_pred cEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCcc--ccEEEE
Q psy160 193 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKT--FPALVY 267 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~--~Pti~~ 267 (346)
.+..+|.++|++++++..+++|.||++ |++|+.+.|.++++|+++++ ++.|+++ .++.+++.|||++ +||+++
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i 84 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAFGAHAGNLNLKTDKFPAFAI 84 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTTGGGTTTTTCCSSSSSEEEE
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHhHHHHHHcCCCcccCCEEEE
Confidence 456889999999888888999999999 89999999999999999987 7999999 5678999999999 999999
Q ss_pred EeC--CeEEEee--cCccccccchhhhhhhcc-CCCCCCcccCCCCCC
Q psy160 268 FRN--GNPLIFE--GENKILKGTYIGTYISTK-AFSLIPFCFSEKHPG 310 (346)
Q Consensus 268 ~~~--g~~~~y~--g~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~ 310 (346)
|++ |+...+. |..+.+. +..|++.. ...+-|.+-||..++
T Consensus 85 ~~~~~g~~~~~~~~g~~~~~~---l~~fi~~~l~Gkl~p~~kSe~iP~ 129 (133)
T 2djk_A 85 QEVAKNQKFPFDQEKEITFEA---IKAFVDDFVAGKIEPSIKSEPIPE 129 (133)
T ss_dssp ECTTTCCBCCCCSSSCCCHHH---HHHHHHHHHHTCCCCSSCCCCCCT
T ss_pred EecCcCcccCCCCccccCHHH---HHHHHHHHHcCCcCccccCCCCCC
Confidence 997 6654444 6665332 55555532 233445665665554
No 196
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.42 E-value=1.3e-11 Score=108.02 Aligned_cols=176 Identities=9% Similarity=0.070 Sum_probs=135.1
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcCChHHHHhcCCCCCCeEEEEeC--------CceeeecC--CCCCH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKISDTEAAAKYNIINLPSLVYFRK--------QVPLLYDG--DLFDE 70 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~~c~~~~i~~~Ptl~~f~~--------~~~~~y~G--~~~~~ 70 (346)
|-|++++| ....+.|.++|+.++. .+.|+.+.+.+++.+|++++ |+|++|++ ..+..|.| ..+.
T Consensus 30 Vgff~~~~---~~~~~~F~~~A~~lr~-~~~F~~t~~~~v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~- 103 (250)
T 3ec3_A 30 LGVFQGVG---DPGYLQYQDAANTLRE-DYKFHHTFSTEIAKFLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEA- 103 (250)
T ss_dssp EEECSCTT---CHHHHHHHHHHHHHTT-TCCEEEECCHHHHHHHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTTSCH-
T ss_pred EEEEcCCC---chHHHHHHHHHHhhhc-CcEEEEECcHHHHHHcCCCC-CeEEEEecchhhccccccceeccCCCCCCH-
Confidence 35788875 4778889999998833 47888889999999999998 99999985 35678985 4444
Q ss_pred HHHHHHHhccCCccccCceeecCHHHHHHHHhcCCcEEEEEECCC-C---h-hHHHHHHHHHHHHhhccCCCcEEEEeC-
Q psy160 71 EKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEENEFVTVFFYETD-H---K-DSVKVLERLEKIDGETDNMDITFVKMA- 144 (346)
Q Consensus 71 ~~i~~~i~~~~~p~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~~-C---~-~c~~~~~~~~~~a~~~~~~~i~~~~~~- 144 (346)
++|.+|+..+..| .|.++|.+|+..+. .+.+.++.|+.+. + . ....+...+.++|+.++ ++.|+-+|
T Consensus 104 ~~l~~fi~~~~~P----lv~e~t~~n~~~~~-~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--ki~F~~~d~ 176 (250)
T 3ec3_A 104 SAIKDYVVKHALP----LVGHRKTSNDAKRY-SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--EYTFAIADE 176 (250)
T ss_dssp HHHHHHHHHHSSC----TEEEECTTTHHHHS-CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--TSEEEEEET
T ss_pred HHHHHHHHHcCCC----ceeecCccchhhhh-ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--ceeEEEEcH
Confidence 6999999999999 99999999999877 4677888888643 2 2 34568999999999988 58888776
Q ss_pred --ChhhHHhhCCCC--c-ceEEEEec-CCcceec-CCcchhHHHHHHHhhccc
Q psy160 145 --DPRYARKWGVTK--L-PAVVYFRH-RFPSIYR-GDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 145 --~~~l~~~~~i~~--~-Ptl~~~~~-g~~~~y~-g~~~~~~~i~~fi~~~~~ 190 (346)
.....+.||+.. + |.++++.. +..+.+. +..+ .++|.+|+.+...
T Consensus 177 ~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t-~~~i~~Fv~~~~~ 228 (250)
T 3ec3_A 177 EDYATEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFD-SDALREFVMAFKK 228 (250)
T ss_dssp TTTHHHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCC-HHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCccCCCcEEEEEcCCCceecCCcccCC-HHHHHHHHHHHHC
Confidence 556778889974 4 46666653 3344455 5566 4599999988543
No 197
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.42 E-value=6e-13 Score=113.81 Aligned_cols=88 Identities=19% Similarity=0.324 Sum_probs=74.8
Q ss_pred CcEEEc-cHHHHHHHHhcc---ceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--cChhhhhhCCCccccEE
Q psy160 192 DRIELI-TRVMLETMVEET---QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 192 ~~v~~l-~~~~~~~~~~~~---~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~~~~~~~~~~i~~~Pti 265 (346)
+.+..+ +.++|.+++... ++++|.||++||++|+.+.|.|.++|+.+. .+.|+.+ +++.++++|+|.++||+
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~~~~l~~~~~i~~~PTl 176 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRASNTGAGDRFSSDVLPTL 176 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHHHHTCSTTSCGGGCSEE
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECCcHHHHHHCCCCCCCEE
Confidence 356677 889999977543 799999999999999999999999999985 6888888 55678999999999999
Q ss_pred EEEeCCeEE-EeecCcc
Q psy160 266 VYFRNGNPL-IFEGENK 281 (346)
Q Consensus 266 ~~~~~g~~~-~y~g~~~ 281 (346)
++|++|+.+ .+.|...
T Consensus 177 ~~~~~G~~v~~~~G~~~ 193 (217)
T 2trc_P 177 LVYKGGELISNFISVAE 193 (217)
T ss_dssp EEEETTEEEEEETTGGG
T ss_pred EEEECCEEEEEEeCCcc
Confidence 999999864 4667654
No 198
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.42 E-value=2.3e-13 Score=102.83 Aligned_cols=75 Identities=12% Similarity=0.034 Sum_probs=61.4
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-------ChhhHHhhCCCCcceEEEEecCCcceecCCcch
Q psy160 105 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-------DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSE 177 (346)
Q Consensus 105 ~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-------~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~ 177 (346)
+..+|.|||+||++|+.+.|.|+++++.+. ++.++ ++++|++|+|+++||+++ +|+ .|.|.++.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~--~~~G~~~~ 83 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR--TYTGVRSL 83 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE--EEESCCCH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC-----EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE--EecCCCCH
Confidence 456899999999999999999999997753 44444 578999999999999877 665 48899884
Q ss_pred hHHHHHHHhhcc
Q psy160 178 EEEVLQWLITQK 189 (346)
Q Consensus 178 ~~~i~~fi~~~~ 189 (346)
+ +|.+|+.-..
T Consensus 84 ~-~l~~~~~~~~ 94 (106)
T 3kp8_A 84 E-ALAVASGYPL 94 (106)
T ss_dssp H-HHHHHHTCCC
T ss_pred H-HHHHHhCCcc
Confidence 4 8999876543
No 199
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.42 E-value=2.4e-13 Score=102.77 Aligned_cols=70 Identities=17% Similarity=0.201 Sum_probs=57.4
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC-------ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS-------DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKI 73 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-------~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i 73 (346)
|+||||||++|+++.|.|+++++.+. .+.++ +.++|.+|+|+++||+++ +|.. |.|..+. +++
T Consensus 17 V~F~A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~~--~~G~~~~-~~l 86 (106)
T 3kp8_A 17 TMYGAYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT--YTGVRSL-EAL 86 (106)
T ss_dssp EEEECTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTEE--EESCCCH-HHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHHhCC-----EEEEecccccchhHHHHHHcCCeEeCEEEE--CCEE--ecCCCCH-HHH
Confidence 68999999999999999999998764 34433 578999999999999777 7764 8897766 589
Q ss_pred HHHHhcc
Q psy160 74 LTWLTSQ 80 (346)
Q Consensus 74 ~~~i~~~ 80 (346)
.+|+.-+
T Consensus 87 ~~~~~~~ 93 (106)
T 3kp8_A 87 AVASGYP 93 (106)
T ss_dssp HHHHTCC
T ss_pred HHHhCCc
Confidence 9987644
No 200
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.41 E-value=7.4e-13 Score=99.49 Aligned_cols=77 Identities=23% Similarity=0.356 Sum_probs=65.4
Q ss_pred EEc-cHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChh----hhhhCCCcc-ccEE
Q psy160 195 ELI-TRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQ----LAKRYSIKT-FPAL 265 (346)
Q Consensus 195 ~~l-~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~----~~~~~~i~~-~Pti 265 (346)
..+ +.++|+++++++++++|.|+|.||++|+.+.|.++++++. . ++.++++ ++++ ++.+|+|++ .|++
T Consensus 9 ~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~ 85 (112)
T 3iv4_A 9 IKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIVQQERDLSDYIAKKTNVKHESPQA 85 (112)
T ss_dssp EECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEE
T ss_pred eecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEeecCchhhHHHHHHhCCccCCCeE
Confidence 344 6688999998899999999999999999999999999985 2 5666666 4433 899999994 9999
Q ss_pred EEEeCCeEE
Q psy160 266 VYFRNGNPL 274 (346)
Q Consensus 266 ~~~~~g~~~ 274 (346)
++|++|+.+
T Consensus 86 il~k~G~~v 94 (112)
T 3iv4_A 86 FYFVNGEMV 94 (112)
T ss_dssp EEEETTEEE
T ss_pred EEEECCEEE
Confidence 999999865
No 201
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.41 E-value=1.1e-12 Score=102.02 Aligned_cols=97 Identities=11% Similarity=0.158 Sum_probs=76.7
Q ss_pred ceeecCHHHHHHHHhc--CCcEEEEEECC-------CChhHHHHHHHHHHHHhhccCCCcEEEE--e-------C-Chhh
Q psy160 88 EIEEVNRRMLDKLLEE--NEFVTVFFYET-------DHKDSVKVLERLEKIDGETDNMDITFVK--M-------A-DPRY 148 (346)
Q Consensus 88 ~v~~l~~~~~~~~~~~--~~~~lv~F~~~-------~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~-------~-~~~l 148 (346)
.+...+.++|++.+.+ +++++|.||++ ||++|+.+.|.+.++++.+.+ ++.++. + + +..+
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTTCHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchhHHH
Confidence 5667789999998876 78999999999 999999999999999998853 366655 4 3 5679
Q ss_pred HHhhCCCCcceEEEEecCCcce-ecCCcchhHHHHHHHhh
Q psy160 149 ARKWGVTKLPAVVYFRHRFPSI-YRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 149 ~~~~~i~~~Ptl~~~~~g~~~~-y~g~~~~~~~i~~fi~~ 187 (346)
+++|+|.++||+++|.++.... +.| .+ .+.|.+|+.+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~~g~~~-~~-~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKLVESEC-LQ-ANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEEEGGGG-GC-HHHHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCceEecccc-CC-HHHHHHHHhc
Confidence 9999999999999998865333 344 23 3478887764
No 202
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.40 E-value=1e-12 Score=103.54 Aligned_cols=85 Identities=19% Similarity=0.335 Sum_probs=69.8
Q ss_pred CcEEEcc-HHHHHHHHhc--cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEE
Q psy160 192 DRIELIT-RVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 192 ~~v~~l~-~~~~~~~~~~--~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti 265 (346)
+.+..++ .+++++++++ +++++|.||++||++|+.+.|.++++++.+ ++.++.+ .+.+++++|+|.++||+
T Consensus 20 ~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 96 (133)
T 3cxg_A 20 SIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKALPTF 96 (133)
T ss_dssp EEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCCCCEE
Confidence 3455665 5889888775 469999999999999999999999998876 4777777 67889999999999999
Q ss_pred EEEe--CCe--EE-EeecC
Q psy160 266 VYFR--NGN--PL-IFEGE 279 (346)
Q Consensus 266 ~~~~--~g~--~~-~y~g~ 279 (346)
++|+ +|+ .+ .+.|.
T Consensus 97 ~~~~~~~g~g~~~~~~~G~ 115 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA 115 (133)
T ss_dssp EEEEEETTEEEEEEEEESC
T ss_pred EEEEecCCCeEEEEEEcCC
Confidence 9997 887 33 46665
No 203
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.40 E-value=6.8e-13 Score=93.85 Aligned_cols=73 Identities=16% Similarity=0.288 Sum_probs=60.3
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcCChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKISDTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWL 77 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~~i 77 (346)
|.||++||++|+++.|.++++++.++. ++.++.+++.+++.+|+|+++||+++ +|..+.. |...+.+++.+++
T Consensus 4 v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~v~~~Pt~~~--~G~~~~~-G~~~~~~~l~~~l 76 (77)
T 1ilo_A 4 IQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIKEMDQILEAGLTALPGLAV--DGELKIM-GRVASKEEIKKIL 76 (77)
T ss_dssp EEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEECSHHHHHHHTCSSSSCEEE--TTEEEEC-SSCCCHHHHHHHC
T ss_pred EEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEecCHHHHHHCCCCcCCEEEE--CCEEEEc-CCCCCHHHHHHHh
Confidence 579999999999999999999988742 57788888999999999999999998 7776554 7652335777775
No 204
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.40 E-value=7.9e-14 Score=109.17 Aligned_cols=100 Identities=11% Similarity=0.187 Sum_probs=81.2
Q ss_pred Cceeec-CHHHHHHHHhc----CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcc
Q psy160 87 NEIEEV-NRRMLDKLLEE----NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLP 158 (346)
Q Consensus 87 ~~v~~l-~~~~~~~~~~~----~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~P 158 (346)
..+.++ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+. ++.++.++ +..++++|+|.++|
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~P 91 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEAMP 91 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCSSC
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCccc
Confidence 467777 56999988865 6899999999999999999999999999875 36666665 67899999999999
Q ss_pred eEEEEecCCc-ceecCCcchhHHHHHHHhhccc
Q psy160 159 AVVYFRHRFP-SIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 159 tl~~~~~g~~-~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
|++++++|+. ..+.|. + .+++.+++.+...
T Consensus 92 t~~~~~~g~~~~~~~g~-~-~~~l~~~l~~~~~ 122 (130)
T 1wmj_A 92 TFLFIKDGAEADKVVGA-R-KDDLQNTIVKHVG 122 (130)
T ss_dssp CCCBCTTTTCCBCCCTT-C-TTTHHHHHHHHTS
T ss_pred eEEEEeCCeEEEEEeCC-C-HHHHHHHHHHHHh
Confidence 9999988884 446773 4 3378888877543
No 205
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.40 E-value=2e-12 Score=97.11 Aligned_cols=96 Identities=20% Similarity=0.236 Sum_probs=74.2
Q ss_pred ceeec-CHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-Chh----hHHhhCCC-CcceE
Q psy160 88 EIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPR----YARKWGVT-KLPAV 160 (346)
Q Consensus 88 ~v~~l-~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~----l~~~~~i~-~~Ptl 160 (346)
....+ |.++|+++++++++++|+|+|.||+.|+.+.|.+++++.. .+..+..++++ .+. ++.++||+ ..||+
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~ 85 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQA 85 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEE
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCCccCCCeE
Confidence 44556 5788999999999999999999999999999999999885 44445555665 433 89999999 59999
Q ss_pred EEEecCCcce--ecCCcchhHHHHHHH
Q psy160 161 VYFRHRFPSI--YRGDLSEEEEVLQWL 185 (346)
Q Consensus 161 ~~~~~g~~~~--y~g~~~~~~~i~~fi 185 (346)
++|++|+.+- -.+.++.. .|.+.+
T Consensus 86 il~k~G~~v~~~SH~~I~~~-~l~~~~ 111 (112)
T 3iv4_A 86 FYFVNGEMVWNRDHGDINVS-SLAQAE 111 (112)
T ss_dssp EEEETTEEEEEEEGGGCSHH-HHHHHT
T ss_pred EEEECCEEEEEeeccccCHH-HHHHhh
Confidence 9999998432 34555533 555543
No 206
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.40 E-value=2.7e-13 Score=105.65 Aligned_cols=87 Identities=20% Similarity=0.337 Sum_probs=69.9
Q ss_pred HHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc-----ChhhhhhCCCccccEEEEEe-CCeEE-Ee
Q psy160 204 TMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ-----DPQLAKRYSIKTFPALVYFR-NGNPL-IF 276 (346)
Q Consensus 204 ~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~-----~~~~~~~~~i~~~Pti~~~~-~g~~~-~y 276 (346)
....++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.++ +.+++++|+|.++||+++|+ +|+.+ .+
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~ 99 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVH 99 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEE
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEe
Confidence 3445678999999999999999999999999999874 67887774 56899999999999999998 88754 57
Q ss_pred ecCccccccchhhhhhhc
Q psy160 277 EGENKILKGTYIGTYIST 294 (346)
Q Consensus 277 ~g~~~~~~~~~~~~~i~~ 294 (346)
.|..+.+. +..+++.
T Consensus 100 ~G~~~~~~---l~~~l~~ 114 (126)
T 2l57_A 100 QGLMRKNN---IETILNS 114 (126)
T ss_dssp ESCCCHHH---HHHHHHH
T ss_pred cCCCCHHH---HHHHHHH
Confidence 78765332 5555543
No 207
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.38 E-value=1.4e-12 Score=113.11 Aligned_cols=87 Identities=18% Similarity=0.296 Sum_probs=73.4
Q ss_pred CcEEEc-cHHHHHHHHh---ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--cChhhhhhCCCccccEE
Q psy160 192 DRIELI-TRVMLETMVE---ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--QDPQLAKRYSIKTFPAL 265 (346)
Q Consensus 192 ~~v~~l-~~~~~~~~~~---~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~~~~~~~~~~i~~~Pti 265 (346)
+.|..+ +.++|.+.+. .+++++|.||++||++|+.+.|.|.++|..+. ++.|+.+ +..+++.+|+|.++||+
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~~~l~~~~~I~~~PTl 189 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKASNTGAGDRFSSDVLPTL 189 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHHHCCTTSSCTTTCSEE
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCcHHHHHHCCCCCCCEE
Confidence 456677 7899999774 36899999999999999999999999999987 4888888 34668999999999999
Q ss_pred EEEeCCeEE-EeecCc
Q psy160 266 VYFRNGNPL-IFEGEN 280 (346)
Q Consensus 266 ~~~~~g~~~-~y~g~~ 280 (346)
++|++|+.+ .+.|..
T Consensus 190 l~~~~G~~v~~~vG~~ 205 (245)
T 1a0r_P 190 LVYKGGELLSNFISVT 205 (245)
T ss_dssp EEEETTEEEEEETTGG
T ss_pred EEEECCEEEEEEeCCc
Confidence 999999864 455643
No 208
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.37 E-value=2e-12 Score=101.70 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=67.9
Q ss_pred HHHHhcCCcEEEEEECCCChhHHHHHHHHH--HHHhhccCCCcEEEE--e---C-ChhhHHhhCC---CCcceEEEE-ec
Q psy160 98 DKLLEENEFVTVFFYETDHKDSVKVLERLE--KIDGETDNMDITFVK--M---A-DPRYARKWGV---TKLPAVVYF-RH 165 (346)
Q Consensus 98 ~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~--~~a~~~~~~~i~~~~--~---~-~~~l~~~~~i---~~~Ptl~~~-~~ 165 (346)
.....++++++|.||++||++|+.+.|.|. ++++.+.+ ++.++. + + +..++++|+| .++||+++| ++
T Consensus 23 ~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~ 101 (133)
T 3fk8_A 23 AAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSD 101 (133)
T ss_dssp HHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTT
T ss_pred HHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCC
Confidence 333456899999999999999999999999 88888732 255544 4 3 6789999999 999999999 67
Q ss_pred CCc-ceecC-------CcchhHHHHHHHhhc
Q psy160 166 RFP-SIYRG-------DLSEEEEVLQWLITQ 188 (346)
Q Consensus 166 g~~-~~y~g-------~~~~~~~i~~fi~~~ 188 (346)
|+. ..+.| ..+ .+++.+|+++.
T Consensus 102 G~~~~~~~g~~~~~~~~~~-~~~l~~~l~~l 131 (133)
T 3fk8_A 102 GKVRYTTKGGELANARKMS-DQGIYDFFAKI 131 (133)
T ss_dssp SCEEEECCSCTTTTGGGSC-HHHHHHHHHHH
T ss_pred CCEEEEecCCcccccccCC-HHHHHHHHHHh
Confidence 874 34556 344 44788887653
No 209
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.36 E-value=1.3e-12 Score=103.03 Aligned_cols=97 Identities=14% Similarity=0.222 Sum_probs=75.5
Q ss_pred cEEEccHHHHHHHHhc--cceEEEEEEcCCChhhHHHHHHH---HHHHhhcCcCceEEEEEc-------ChhhhhhCCCc
Q psy160 193 RIELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKIQ-------DPQLAKRYSIK 260 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~--~~~~lv~F~~~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i~-------~~~~~~~~~i~ 260 (346)
.....+.++++..+.+ +++++|.||++||++|+.+.+.+ .++++.+. ++.++.++ +.+++++|+|.
T Consensus 13 f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~~~~l~~~~~v~ 90 (134)
T 2fwh_A 13 FTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQDVALLKHLNVL 90 (134)
T ss_dssp CEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHHHHHHHHHTTCC
T ss_pred cEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcchHHHHHHHcCCC
Confidence 3335567788776654 78999999999999999999999 89998887 47777772 35789999999
Q ss_pred cccEEEEE-eCCeEE---EeecCccccccchhhhhhhc
Q psy160 261 TFPALVYF-RNGNPL---IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 261 ~~Pti~~~-~~g~~~---~y~g~~~~~~~~~~~~~i~~ 294 (346)
++|++++| ++|+.+ .+.|..+.+. +..+++.
T Consensus 91 ~~Pt~~~~d~~G~~v~~~~~~G~~~~~~---l~~~l~~ 125 (134)
T 2fwh_A 91 GLPTILFFDGQGQEHPQARVTGFMDAET---FSAHLRD 125 (134)
T ss_dssp SSSEEEEECTTSCBCGGGCBCSCCCHHH---HHHHHHH
T ss_pred CCCEEEEECCCCCEeeeeeeeeccCHHH---HHHHHHh
Confidence 99999999 889875 6888776333 5555443
No 210
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.05 E-value=6e-14 Score=105.40 Aligned_cols=87 Identities=24% Similarity=0.473 Sum_probs=73.2
Q ss_pred EEEccHHHHHHH-HhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEe
Q psy160 194 IELITRVMLETM-VEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 194 v~~l~~~~~~~~-~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~ 269 (346)
+..++.+++++. ++++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+ .+.+++++|++.++|++++|+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDENPNTAAQYGIRSIPTLLLFK 81 (106)
Confidence 456788888764 56788999999999999999999999999999875 6777777 577899999999999999999
Q ss_pred CCeEE-EeecCcc
Q psy160 270 NGNPL-IFEGENK 281 (346)
Q Consensus 270 ~g~~~-~y~g~~~ 281 (346)
+|+.+ .+.|..+
T Consensus 82 ~g~~~~~~~g~~~ 94 (106)
T 2yj7_A 82 NGQVVDRLVGAQP 94 (106)
Confidence 88754 4667654
No 211
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.36 E-value=2.8e-12 Score=99.60 Aligned_cols=82 Identities=15% Similarity=0.218 Sum_probs=70.0
Q ss_pred cEEEccHHHHHHHHhc--cceEEEEEEcC-------CChhhHHHHHHHHHHHhhcCcCceEEEEE----------cChhh
Q psy160 193 RIELITRVMLETMVEE--TQYLAVYFYKL-------NCNICDQILEGLEKVDDECDIYGIHMVKI----------QDPQL 253 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~--~~~~lv~F~~~-------~c~~c~~~~~~~~~la~~~~~~~i~~~~i----------~~~~~ 253 (346)
.+...+.++|++.+.+ +++++|.||++ ||++|+.+.|.+.++++.+.+ ++.++.+ .+..+
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTTCHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchhHHH
Confidence 4556788999987765 78999999999 999999999999999999875 7888887 24578
Q ss_pred hhhCCCccccEEEEEeCCeEEE
Q psy160 254 AKRYSIKTFPALVYFRNGNPLI 275 (346)
Q Consensus 254 ~~~~~i~~~Pti~~~~~g~~~~ 275 (346)
+++|+|+++||+++|+++..+.
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~~ 106 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKLV 106 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEEE
T ss_pred HHHCCCCeeCEEEEEcCCceEe
Confidence 9999999999999998876543
No 212
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.35 E-value=1.4e-12 Score=93.99 Aligned_cols=75 Identities=21% Similarity=0.431 Sum_probs=61.7
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC---ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS---DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWL 77 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~~i 77 (346)
|.||++||++|+++.|.++++++.+.. ++.++.++ +++++.+|+|+++||+++ +|.. .+.|..+. +.+.+++
T Consensus 6 v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~-~~l~~~l 80 (85)
T 1nho_A 6 EVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-RFVGAPSR-EELFEAI 80 (85)
T ss_dssp EEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-EEECSSCC-HHHHHHH
T ss_pred EEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-EEccCCCH-HHHHHHH
Confidence 579999999999999999999998842 46665554 678999999999999998 7776 78887666 5888888
Q ss_pred hcc
Q psy160 78 TSQ 80 (346)
Q Consensus 78 ~~~ 80 (346)
.+.
T Consensus 81 ~~~ 83 (85)
T 1nho_A 81 NDE 83 (85)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 213
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.34 E-value=1.6e-12 Score=93.66 Aligned_cols=78 Identities=18% Similarity=0.256 Sum_probs=65.0
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHH
Q psy160 106 FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVL 182 (346)
Q Consensus 106 ~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~ 182 (346)
..++.||++||++|+++.|.++++++.+.+ ++.++.+| +++++++|||.++||+++ +|+. .+.|..+.+ ++.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~-~l~ 77 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-RFVGAPSRE-ELF 77 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-EEECSSCCH-HHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-EEccCCCHH-HHH
Confidence 358999999999999999999999998853 36666654 678999999999999999 7776 788877644 899
Q ss_pred HHHhhc
Q psy160 183 QWLITQ 188 (346)
Q Consensus 183 ~fi~~~ 188 (346)
+++.+.
T Consensus 78 ~~l~~~ 83 (85)
T 1nho_A 78 EAINDE 83 (85)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 214
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.33 E-value=1.4e-12 Score=93.95 Aligned_cols=79 Identities=13% Similarity=0.244 Sum_probs=65.3
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHH
Q psy160 105 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEV 181 (346)
Q Consensus 105 ~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i 181 (346)
.+.++.||++||++|+++.|.++++++.+.+ ++.++.+| +++++++|||.++||+++ +|+. .+.|..+.+ ++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~-~l 77 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-EFIGAPTKE-AL 77 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-ECCSSSSSH-HH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-eeecCCCHH-HH
Confidence 4579999999999999999999999998753 36666554 678999999999999999 7766 788877644 89
Q ss_pred HHHHhhc
Q psy160 182 LQWLITQ 188 (346)
Q Consensus 182 ~~fi~~~ 188 (346)
.+++.+.
T Consensus 78 ~~~l~~~ 84 (85)
T 1fo5_A 78 VEAIKKR 84 (85)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9888753
No 215
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.33 E-value=7.2e-13 Score=124.61 Aligned_cols=93 Identities=14% Similarity=0.239 Sum_probs=78.1
Q ss_pred cCcEEEccHHHHHHHHhc--cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcC-------ceEEEEE---cChhhhhhCC
Q psy160 191 EDRIELITRVMLETMVEE--TQYLAVYFYKLNCNICDQILEGLEKVDDECDIY-------GIHMVKI---QDPQLAKRYS 258 (346)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~--~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~-------~i~~~~i---~~~~~~~~~~ 258 (346)
+..+..++.++|++++.. .++++|.|||+||++|+.+.|.++++++.+.+. .+.|+.| .+++++++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 346788999999987654 378999999999999999999999999998621 4889988 6789999999
Q ss_pred CccccEEEEEeCCe---EEEeecCcccc
Q psy160 259 IKTFPALVYFRNGN---PLIFEGENKIL 283 (346)
Q Consensus 259 i~~~Pti~~~~~g~---~~~y~g~~~~~ 283 (346)
|.++||+++|++|+ ...|.|.++.+
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHH
Confidence 99999999997553 45688887643
No 216
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.33 E-value=5e-12 Score=89.29 Aligned_cols=73 Identities=22% Similarity=0.256 Sum_probs=61.8
Q ss_pred EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCCCcceEEEEecCCcceecCCc-chhHHHHHHH
Q psy160 108 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRHRFPSIYRGDL-SEEEEVLQWL 185 (346)
Q Consensus 108 lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~-~~~~~i~~fi 185 (346)
.|.||++||++|+.+.|.++++++.+.. ++.++.+++.+++++|||.++||+++ +|+.... |.. + .+++.+++
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~v~~~Pt~~~--~G~~~~~-G~~~~-~~~l~~~l 76 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIKEMDQILEAGLTALPGLAV--DGELKIM-GRVAS-KEEIKKIL 76 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEECSHHHHHHHTCSSSSCEEE--TTEEEEC-SSCCC-HHHHHHHC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEecCHHHHHHCCCCcCCEEEE--CCEEEEc-CCCCC-HHHHHHHh
Confidence 5899999999999999999999998753 48888888899999999999999998 7775444 876 5 44788775
No 217
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.31 E-value=3.4e-12 Score=91.91 Aligned_cols=68 Identities=26% Similarity=0.404 Sum_probs=59.8
Q ss_pred ceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccEEEEEeCCeEEEeecCcc
Q psy160 210 QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENK 281 (346)
Q Consensus 210 ~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pti~~~~~g~~~~y~g~~~ 281 (346)
.+.++.||++||++|+.+.|.++++++++.+ ++.+..+ ++++++++|+++++||+++ +|+. .+.|..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-EFIGAPT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-ECCSSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-eeecCCC
Confidence 3678999999999999999999999999885 7888887 5678999999999999998 8887 7888754
No 218
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.31 E-value=3.2e-11 Score=116.74 Aligned_cols=169 Identities=12% Similarity=0.140 Sum_probs=121.4
Q ss_pred eecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcCChHHHHhcCCCCCCeEEEEeCCc--eeeecCCCCCHHHHHHHHhc
Q psy160 2 YINDENCPECDDILEELEHIDGDADQYGIDMVKISDTEAAAKYNIINLPSLVYFRKQV--PLLYDGDLFDEEKILTWLTS 79 (346)
Q Consensus 2 ~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~~c~~~~i~~~Ptl~~f~~~~--~~~y~G~~~~~~~i~~~i~~ 79 (346)
.++.+.|..|+++...++++++..++ |.+...++. . ...|++.+.++|. .+.|.|-+.-+ ++..|+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~s~~--i~~~~~~~~------~-~~~p~~~~~~~~~~~~i~f~g~p~g~-e~~s~~~~ 93 (521)
T 1hyu_A 24 IATLDDSAKSAEIKELLAEIAELSDK--VTFKEDNTL------P-VRKPSFLITNPGSQQGPRFAGSPLGH-EFTSLVLA 93 (521)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTTCTT--EEEEECTTS------S-SCSSEEEEECTTCCCSCEEESCCCGG-GHHHHHHH
T ss_pred EEEeCCCcchHHHHHHHHHHHHhCCc--eEEEEcCCc------c-cCCCEEEEecCCCcceEEEeccCcch-hHHHHHHH
Confidence 35667899999999888888776543 444322211 0 5679999997763 46799987775 66666543
Q ss_pred cCCccccCceeecCHHHHHHHHhc-CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCC
Q psy160 80 QDVFEIKNEIEEVNRRMLDKLLEE-NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVT 155 (346)
Q Consensus 80 ~~~p~~~~~v~~l~~~~~~~~~~~-~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~ 155 (346)
-... +..-..++++.++.+... .+..++.|+++||++|+.+.|.+++++..+. ++.+..+| +++++.+|+|.
T Consensus 94 l~~~--~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~~~~~~~~i~ 169 (521)
T 1hyu_A 94 LLWT--GGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQNEITERNVM 169 (521)
T ss_dssp HHHH--TTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCC
T ss_pred HHhh--cCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhHHHHHHhCCC
Confidence 2111 112346788888877544 3556899999999999999999999998764 46776654 78999999999
Q ss_pred CcceEEEEecCCcceecCCcchhHHHHHHHhhc
Q psy160 156 KLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 156 ~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+.||+++ +|+.+ ..|..+ .++|.+|+...
T Consensus 170 svPt~~i--~g~~~-~~G~~~-~~~l~~~l~~~ 198 (521)
T 1hyu_A 170 GVPAVFV--NGKEF-GQGRMT-LTEIVAKVDTG 198 (521)
T ss_dssp SSSEEEE--TTEEE-EESCCC-HHHHHHHHCCS
T ss_pred ccCEEEE--CCEEE-ecCCCC-HHHHHHHHhhc
Confidence 9999977 77654 348776 44899998765
No 219
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.29 E-value=5.7e-12 Score=99.06 Aligned_cols=72 Identities=21% Similarity=0.279 Sum_probs=61.2
Q ss_pred HhccceEEEEEEcCCChhhHHHHHHHH--HHHhhcCcCceEEEEE------cChhhhhhCCC---ccccEEEEE-eCCeE
Q psy160 206 VEETQYLAVYFYKLNCNICDQILEGLE--KVDDECDIYGIHMVKI------QDPQLAKRYSI---KTFPALVYF-RNGNP 273 (346)
Q Consensus 206 ~~~~~~~lv~F~~~~c~~c~~~~~~~~--~la~~~~~~~i~~~~i------~~~~~~~~~~i---~~~Pti~~~-~~g~~ 273 (346)
..++++++|.||++||++|+.+.|.+. ++++.+.+ ++.++.+ .+.+++++|+| .++||+++| ++|+.
T Consensus 26 ~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 26 KRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 356889999999999999999999999 99988864 6777777 35789999999 999999999 78875
Q ss_pred E-Eeec
Q psy160 274 L-IFEG 278 (346)
Q Consensus 274 ~-~y~g 278 (346)
+ .+.|
T Consensus 105 ~~~~~g 110 (133)
T 3fk8_A 105 RYTTKG 110 (133)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 4 3455
No 220
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.27 E-value=4.9e-12 Score=96.24 Aligned_cols=85 Identities=15% Similarity=0.098 Sum_probs=63.4
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhc---cCCCcEEEEeCC---hhhHHhhCCCCcceEEEEecCC-cceecCCc
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGET---DNMDITFVKMAD---PRYARKWGVTKLPAVVYFRHRF-PSIYRGDL 175 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~---~~~~i~~~~~~~---~~l~~~~~i~~~Ptl~~~~~g~-~~~y~g~~ 175 (346)
+...++|+|||+||++|+.+.+.+....+.. ....+..++++. ..++.+++|.+.||+++|++|+ ..+..|..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 3467899999999999999987654433321 123455566653 4799999999999999999998 45688988
Q ss_pred chhHHHHHHHhhc
Q psy160 176 SEEEEVLQWLITQ 188 (346)
Q Consensus 176 ~~~~~i~~fi~~~ 188 (346)
..+ .+..|+...
T Consensus 97 ~~~-~f~~~L~~~ 108 (116)
T 3dml_A 97 GED-FFWPMLARL 108 (116)
T ss_dssp CHH-HHHHHHHHH
T ss_pred CHH-HHHHHHHHH
Confidence 855 888888764
No 221
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.27 E-value=3.6e-10 Score=109.32 Aligned_cols=162 Identities=16% Similarity=0.202 Sum_probs=116.5
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCCCcceEEEEecCC--cceecCCcchhHHHH
Q psy160 105 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTKLPAVVYFRHRF--PSIYRGDLSEEEEVL 182 (346)
Q Consensus 105 ~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~~~Ptl~~~~~g~--~~~y~g~~~~~~~i~ 182 (346)
+++-+.++...|..|.++..-+++++..-. ++.+...+.. . ...|++.+.++|+ .++|.|-..-. ++.
T Consensus 19 ~~v~l~~~~~~~~~~~~~~~~~~~~~~~s~--~i~~~~~~~~------~-~~~p~~~~~~~~~~~~i~f~g~p~g~-e~~ 88 (521)
T 1hyu_A 19 KPVELIATLDDSAKSAEIKELLAEIAELSD--KVTFKEDNTL------P-VRKPSFLITNPGSQQGPRFAGSPLGH-EFT 88 (521)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHTTCT--TEEEEECTTS------S-SCSSEEEEECTTCCCSCEEESCCCGG-GHH
T ss_pred CCEEEEEEeCCCcchHHHHHHHHHHHHhCC--ceEEEEcCCc------c-cCCCEEEEecCCCcceEEEeccCcch-hHH
Confidence 456556666679999999988888876533 2555333211 0 5679999998775 57898866534 566
Q ss_pred HHHhhccc-cCcEEEccHHHHHHHHhc-cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhC
Q psy160 183 QWLITQKT-EDRIELITRVMLETMVEE-TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRY 257 (346)
Q Consensus 183 ~fi~~~~~-~~~v~~l~~~~~~~~~~~-~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~ 257 (346)
.|+..... ...-..++.+.++.+.+. .+..++.|+++||++|+.+.|.+++++..+. ++.+..+ .+++++++|
T Consensus 89 s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~~~~~~~ 166 (521)
T 1hyu_A 89 SLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQNEITER 166 (521)
T ss_dssp HHHHHHHHHTTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHT
T ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhHHHHHHh
Confidence 66655322 111235677777777543 4566888999999999999999999998875 6888777 678999999
Q ss_pred CCccccEEEEEeCCeEEEeecCcc
Q psy160 258 SIKTFPALVYFRNGNPLIFEGENK 281 (346)
Q Consensus 258 ~i~~~Pti~~~~~g~~~~y~g~~~ 281 (346)
+|.+.|++++ +|+.+ ..|..+
T Consensus 167 ~i~svPt~~i--~g~~~-~~G~~~ 187 (521)
T 1hyu_A 167 NVMGVPAVFV--NGKEF-GQGRMT 187 (521)
T ss_dssp TCCSSSEEEE--TTEEE-EESCCC
T ss_pred CCCccCEEEE--CCEEE-ecCCCC
Confidence 9999999977 88765 346654
No 222
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.26 E-value=4.5e-12 Score=99.13 Aligned_cols=95 Identities=16% Similarity=0.335 Sum_probs=71.1
Q ss_pred EccHHHHHHHH----hccceEEEEEEcCCChhhHHHHHHH---HHHHhhcCcCceEEEEE--c---ChhhhhhCCCcccc
Q psy160 196 LITRVMLETMV----EETQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI--Q---DPQLAKRYSIKTFP 263 (346)
Q Consensus 196 ~l~~~~~~~~~----~~~~~~lv~F~~~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i--~---~~~~~~~~~i~~~P 263 (346)
.++..++++.+ .++++++|.||++||++|+.+.|.+ .++++.+.. .+.++.+ + +..++++|+|.++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~~P 88 (130)
T 2kuc_A 10 AFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELRKKYGVHAYP 88 (130)
T ss_dssp CCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHHHHTTCCSSC
T ss_pred CcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHHHHcCCCCCC
Confidence 34556666644 3678999999999999999999999 677766654 6777777 2 45789999999999
Q ss_pred EEEEE-eCCeEE-EeecCccccccchhhhhhhc
Q psy160 264 ALVYF-RNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 264 ti~~~-~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
+++++ ++|+.+ .+.|..+.+. +..+++.
T Consensus 89 t~~~~d~~G~~~~~~~G~~~~~~---l~~~l~~ 118 (130)
T 2kuc_A 89 TLLFINSSGEVVYRLVGAEDAPE---LLKKVKL 118 (130)
T ss_dssp EEEEECTTSCEEEEEESCCCHHH---HHHHHHH
T ss_pred EEEEECCCCcEEEEecCCCCHHH---HHHHHHH
Confidence 99999 688754 5778765322 4455544
No 223
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.25 E-value=1.2e-11 Score=101.79 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=67.0
Q ss_pred ecCHHHHHHHH----hcCCcEEEEEECCCChhHHHHHHHH---HHHHhhccCCCcEEEEeC---Chhh------------
Q psy160 91 EVNRRMLDKLL----EENEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA---DPRY------------ 148 (346)
Q Consensus 91 ~l~~~~~~~~~----~~~~~~lv~F~~~~C~~c~~~~~~~---~~~a~~~~~~~i~~~~~~---~~~l------------ 148 (346)
..+..++++.+ .++++++|.|||+||++|+.+.+.+ .++.+.+++ ++.++.++ ...+
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchh
Confidence 34445555554 5678999999999999999984443 444443322 35665554 2222
Q ss_pred --------------HHhhCCCCcceEEEE-ecCC-cceecCCcchhHHHHHHHhhc
Q psy160 149 --------------ARKWGVTKLPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 149 --------------~~~~~i~~~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+++|+|.++||++++ ++|+ ...+.|...+.+++.+++.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHH
Confidence 789999999999999 5787 445778886344888888764
No 224
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.22 E-value=2.7e-11 Score=98.99 Aligned_cols=94 Identities=7% Similarity=0.072 Sum_probs=71.2
Q ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhc-cCCCcEEEEeC-Chh-hHHhhCC--CCcceEEEE-ecCC
Q psy160 94 RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGET-DNMDITFVKMA-DPR-YARKWGV--TKLPAVVYF-RHRF 167 (346)
Q Consensus 94 ~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~-~~~~i~~~~~~-~~~-l~~~~~i--~~~Ptl~~~-~~g~ 167 (346)
++.++....++++++|.||++||++|+.+.|.|.++++.. .+..+..+.++ .+. ++.+|++ .++||+++| ++|+
T Consensus 36 ~~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 36 EDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGK 115 (164)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSC
T ss_pred HHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCC
Confidence 3677777788899999999999999999999999987655 23456666665 334 7888988 669999999 6787
Q ss_pred c-ceecCC----------cchhHHHHHHHhhc
Q psy160 168 P-SIYRGD----------LSEEEEVLQWLITQ 188 (346)
Q Consensus 168 ~-~~y~g~----------~~~~~~i~~fi~~~ 188 (346)
. ..+.|. .+ .+++++++++.
T Consensus 116 ~~~~~~G~~~~~~~~~~~~~-~~~l~~~l~~~ 146 (164)
T 1sen_A 116 VHPEIINENGNPSYKYFYVS-AEQVVQGMKEA 146 (164)
T ss_dssp BCTTCCCTTSCTTSTTCCCS-HHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhcccCC-HHHHHHHHHHH
Confidence 4 345663 33 44788877664
No 225
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.86 E-value=1.1e-12 Score=102.85 Aligned_cols=93 Identities=14% Similarity=0.155 Sum_probs=71.8
Q ss_pred HHHHHHHhcCCcEEEEEECCCChhHHHHHHHH---HHHHhhccCCCcEEEEeC-----ChhhHHhhCCCCcceEEEE--e
Q psy160 95 RMLDKLLEENEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA-----DPRYARKWGVTKLPAVVYF--R 164 (346)
Q Consensus 95 ~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~---~~~a~~~~~~~i~~~~~~-----~~~l~~~~~i~~~Ptl~~~--~ 164 (346)
+.+.....++++++|.||++||++|+.+.|.+ .++++.+.. ++.++.++ ...++++|+|.++||+++| +
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 34455555678999999999999999999999 888877644 25555544 4679999999999999999 5
Q ss_pred cCCc---ceecCCcchhHHHHHHHhhcc
Q psy160 165 HRFP---SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 165 ~g~~---~~y~g~~~~~~~i~~fi~~~~ 189 (346)
+|+. ..+.|..+.+ .+.+++.+..
T Consensus 89 ~G~~~~~~~~~G~~~~~-~l~~~l~~~~ 115 (130)
T 2lst_A 89 AGAWEEVGRLFGSRPRA-EFLKELRQVC 115 (130)
Confidence 6764 4578877744 7888887654
No 226
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.21 E-value=8.5e-12 Score=94.94 Aligned_cols=78 Identities=12% Similarity=0.137 Sum_probs=57.9
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhh---cccCCeEEEcCC---hHHHHhcCCCCCCeEEEEeCCcee-eecCCCCCHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDA---DQYGIDMVKISD---TEAAAKYNIINLPSLVYFRKQVPL-LYDGDLFDEEKI 73 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~---~~~~i~~~~~~~---~~~c~~~~i~~~Ptl~~f~~~~~~-~y~G~~~~~~~i 73 (346)
|+|||+||++|+.+.+++....+.. ....+..++++. .+++.+|+|.+.||+++|++|..+ ...|.... +.+
T Consensus 23 V~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~~~-~~f 101 (116)
T 3dml_A 23 LMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYPGE-DFF 101 (116)
T ss_dssp EEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCCCH-HHH
T ss_pred EEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCCCH-HHH
Confidence 6899999999999987665443322 123455556654 478999999999999999999765 46776665 588
Q ss_pred HHHHhc
Q psy160 74 LTWLTS 79 (346)
Q Consensus 74 ~~~i~~ 79 (346)
..|+..
T Consensus 102 ~~~L~~ 107 (116)
T 3dml_A 102 WPMLAR 107 (116)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888764
No 227
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.21 E-value=4.6e-11 Score=97.71 Aligned_cols=84 Identities=15% Similarity=0.138 Sum_probs=65.0
Q ss_pred EccHHHHHHHHh-ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCC---CccccEEEEE
Q psy160 196 LITRVMLETMVE-ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYS---IKTFPALVYF 268 (346)
Q Consensus 196 ~l~~~~~~~~~~-~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~---i~~~Pti~~~ 268 (346)
.++.+.+..+.+ .+++++|.|||+||++|+.+.|.+.++++.+. ++.+..+ .+++++.+|. +.++||++++
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~ 117 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVL 117 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEE
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEE
Confidence 344555554433 45789999999999999999999999998875 5778877 4667888887 9999999999
Q ss_pred eCC-eEEEeecCcc
Q psy160 269 RNG-NPLIFEGENK 281 (346)
Q Consensus 269 ~~g-~~~~y~g~~~ 281 (346)
++| +.+...|.+.
T Consensus 118 ~~~G~~~~~~g~~p 131 (167)
T 1z6n_A 118 DEEFNLLGRFVERP 131 (167)
T ss_dssp CTTCCEEEEEESSC
T ss_pred CCCCCEEEEEcCCC
Confidence 875 6554446654
No 228
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.20 E-value=1.2e-12 Score=102.27 Aligned_cols=84 Identities=13% Similarity=0.335 Sum_probs=69.9
Q ss_pred cEEEc-cHHHHHHHHhc----cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhCCCccccE
Q psy160 193 RIELI-TRVMLETMVEE----TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRYSIKTFPA 264 (346)
Q Consensus 193 ~v~~l-~~~~~~~~~~~----~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~~i~~~Pt 264 (346)
.+..+ +.+++++.+.. +++++|.||++||++|+.+.|.+.++++.+. ++.++.+ .+.+++++|+|.++||
T Consensus 15 ~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt 92 (130)
T 1wmj_A 15 VVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEAMPT 92 (130)
T ss_dssp SSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCSSCC
T ss_pred ceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCccce
Confidence 34455 56888887653 7899999999999999999999999999986 5777777 5778999999999999
Q ss_pred EEEEeCCeEEE-eec
Q psy160 265 LVYFRNGNPLI-FEG 278 (346)
Q Consensus 265 i~~~~~g~~~~-y~g 278 (346)
++++++|+.+. +.|
T Consensus 93 ~~~~~~g~~~~~~~g 107 (130)
T 1wmj_A 93 FLFIKDGAEADKVVG 107 (130)
T ss_dssp CCBCTTTTCCBCCCT
T ss_pred EEEEeCCeEEEEEeC
Confidence 99999997543 556
No 229
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.80 E-value=2.2e-12 Score=101.02 Aligned_cols=80 Identities=20% Similarity=0.358 Sum_probs=64.3
Q ss_pred HHHHHHhccceEEEEEEcCCChhhHHHHHHH---HHHHhhcCcCceEEEEE-----cChhhhhhCCCccccEEEEE--eC
Q psy160 201 MLETMVEETQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI-----QDPQLAKRYSIKTFPALVYF--RN 270 (346)
Q Consensus 201 ~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i-----~~~~~~~~~~i~~~Pti~~~--~~ 270 (346)
.++....++++++|.||++||++|+.+.|.+ .++++.+.+ ++.++.+ .+..++++|+|.++||+++| ++
T Consensus 11 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~ 89 (130)
T 2lst_A 11 ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKA 89 (130)
Confidence 3444455678999999999999999999999 888888775 5777766 34678999999999999999 66
Q ss_pred CeE---EEeecCcc
Q psy160 271 GNP---LIFEGENK 281 (346)
Q Consensus 271 g~~---~~y~g~~~ 281 (346)
|+. ..+.|..+
T Consensus 90 G~~~~~~~~~G~~~ 103 (130)
T 2lst_A 90 GAWEEVGRLFGSRP 103 (130)
Confidence 775 34777665
No 230
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.17 E-value=8.7e-11 Score=94.27 Aligned_cols=81 Identities=7% Similarity=-0.009 Sum_probs=61.1
Q ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhh--ccCCCcEEEEeC--ChhhHHhhCCCCcceEEEEe-cCCc
Q psy160 94 RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGE--TDNMDITFVKMA--DPRYARKWGVTKLPAVVYFR-HRFP 168 (346)
Q Consensus 94 ~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~--~~~~~i~~~~~~--~~~l~~~~~i~~~Ptl~~~~-~g~~ 168 (346)
++.++....++++++|.|||+||++|+.+.|.+.+.... +.+.++..+++| ..+++.++++.++||+++|. +|+.
T Consensus 34 ~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 34 EEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp HHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCB
T ss_pred HHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCE
Confidence 355666667789999999999999999999998864322 112246777775 45678899999999999998 7773
Q ss_pred -ceecCC
Q psy160 169 -SIYRGD 174 (346)
Q Consensus 169 -~~y~g~ 174 (346)
.+..|.
T Consensus 114 v~~~~G~ 120 (151)
T 3ph9_A 114 RADIAGR 120 (151)
T ss_dssp CTTCCCS
T ss_pred EEEEeCC
Confidence 335554
No 231
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.16 E-value=1.1e-11 Score=109.69 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=57.6
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC-------ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS-------DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKI 73 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-------~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i 73 (346)
|+||||||+||+++.|.|++++++++ .++++ ++++|++|+|+++||+++ +|+. |.|..+. +++
T Consensus 202 V~F~A~WC~~Ck~l~p~le~lA~~l~-----~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~~--~~G~~~~-~~L 271 (291)
T 3kp9_A 202 TMYGAYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT--YTGVRSL-EAL 271 (291)
T ss_dssp EEEECTTCHHHHHHHHHHGGGGGGSC-----EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTEE--EESCCCH-HHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHcC-----EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCEE--ecCCCCH-HHH
Confidence 68999999999999999999998763 33333 589999999999999554 7765 8897666 589
Q ss_pred HHHHhccC
Q psy160 74 LTWLTSQD 81 (346)
Q Consensus 74 ~~~i~~~~ 81 (346)
.+|+.-+.
T Consensus 272 ~~~l~~~~ 279 (291)
T 3kp9_A 272 AVASGYPL 279 (291)
T ss_dssp HHHTCCCC
T ss_pred HHHHCCCC
Confidence 99976543
No 232
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.16 E-value=1.3e-10 Score=93.86 Aligned_cols=89 Identities=11% Similarity=0.205 Sum_probs=66.6
Q ss_pred HHHHHhcCCcEEEEEE-CCCChhHHHHHHHH---HHHHhhccCCCcEEEEeC--C------------hhhHHhhCCCCcc
Q psy160 97 LDKLLEENEFVTVFFY-ETDHKDSVKVLERL---EKIDGETDNMDITFVKMA--D------------PRYARKWGVTKLP 158 (346)
Q Consensus 97 ~~~~~~~~~~~lv~F~-~~~C~~c~~~~~~~---~~~a~~~~~~~i~~~~~~--~------------~~l~~~~~i~~~P 158 (346)
+.....++++++|.|| ++||++|+.+.|.+ .++++... .++.++.+| . ..++++|+|.++|
T Consensus 40 ~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~P 118 (154)
T 2ju5_A 40 LEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFP 118 (154)
T ss_dssp HHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSS
T ss_pred HHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCC
Confidence 3333345789999999 99999999999999 66655542 236666665 2 3789999999999
Q ss_pred eEEEE-ecCCc-ceecCCc--chhHHHHHHHhhc
Q psy160 159 AVVYF-RHRFP-SIYRGDL--SEEEEVLQWLITQ 188 (346)
Q Consensus 159 tl~~~-~~g~~-~~y~g~~--~~~~~i~~fi~~~ 188 (346)
|++++ ++|+. ..+ |.. + .+.+.+++.+.
T Consensus 119 t~~~~d~~G~~~~~~-G~~~~~-~~~l~~~l~~~ 150 (154)
T 2ju5_A 119 ELVFIDAEGKQLARM-GFEPGG-GAAYVSKVKSA 150 (154)
T ss_dssp EEEEECTTCCEEEEE-CCCTTC-HHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEe-cCCCCC-HHHHHHHHHHH
Confidence 99999 57874 346 776 5 44788888764
No 233
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.15 E-value=6.2e-11 Score=96.91 Aligned_cols=92 Identities=13% Similarity=0.021 Sum_probs=67.2
Q ss_pred ecCHHHHHHHHh-cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhC---CCCcceEEEE
Q psy160 91 EVNRRMLDKLLE-ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWG---VTKLPAVVYF 163 (346)
Q Consensus 91 ~l~~~~~~~~~~-~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~---i~~~Ptl~~~ 163 (346)
.++++.++.+.. ++++++|.|+|+||++|+.+.|.++++++.+. ++.++.++ +++++.+|+ +.++||+++|
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~ 117 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVL 117 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEE
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEE
Confidence 456666665543 35788999999999999999999999998764 36677665 567888887 9999999999
Q ss_pred ecC-CcceecCCcchhHHHHHHHh
Q psy160 164 RHR-FPSIYRGDLSEEEEVLQWLI 186 (346)
Q Consensus 164 ~~g-~~~~y~g~~~~~~~i~~fi~ 186 (346)
.+| +....-|... . .+.+.+.
T Consensus 118 ~~~G~~~~~~g~~p-~-~~~~~i~ 139 (167)
T 1z6n_A 118 DEEFNLLGRFVERP-Q-AVLDGGP 139 (167)
T ss_dssp CTTCCEEEEEESSC-H-HHHHHCH
T ss_pred CCCCCEEEEEcCCC-H-HHHHhHH
Confidence 875 5433335544 2 3444444
No 234
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.14 E-value=2.5e-10 Score=89.42 Aligned_cols=83 Identities=16% Similarity=0.247 Sum_probs=68.0
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-------------------------ChhhHHhhCCCCc
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-------------------------DPRYARKWGVTKL 157 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-------------------------~~~l~~~~~i~~~ 157 (346)
.+++++|.||++||++|+.+.|.+.++++.+. ++.++.++ ...++++|+|.++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQ 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCC
Confidence 46789999999999999999999999999886 46666543 3578999999999
Q ss_pred ceEEEE-ecCCcceec---CCcchhHHHHHHHhhc
Q psy160 158 PAVVYF-RHRFPSIYR---GDLSEEEEVLQWLITQ 188 (346)
Q Consensus 158 Ptl~~~-~~g~~~~y~---g~~~~~~~i~~fi~~~ 188 (346)
|+++++ ++|+...+. |..+. +++.+++.+.
T Consensus 101 P~~~lid~~G~i~~~~~~~g~~~~-~~l~~~l~~l 134 (136)
T 1lu4_A 101 PAFVFYRADGTSTFVNNPTAAMSQ-DELSGRVAAL 134 (136)
T ss_dssp SEEEEECTTSCEEEECCSSSCCCH-HHHHHHHHHC
T ss_pred CEEEEECCCCcEEEEEcCCCccCH-HHHHHHHHHH
Confidence 999999 467744788 87774 4898888764
No 235
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.14 E-value=1e-10 Score=95.06 Aligned_cols=101 Identities=12% Similarity=0.192 Sum_probs=72.4
Q ss_pred eeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEE---------------------------
Q psy160 89 IEEVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFV--------------------------- 141 (346)
Q Consensus 89 v~~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~--------------------------- 141 (346)
+..++.+.+......+++++|.||++||++|+.+.|.+.++++.+...++.++
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPK 102 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTT
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCc
Confidence 33344333332223567899999999999999999999999988633222222
Q ss_pred ---EeC-ChhhHHhhCCCCcceEEEE-ecCC-cceecCCcchhHHHHHHHhhccc
Q psy160 142 ---KMA-DPRYARKWGVTKLPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 142 ---~~~-~~~l~~~~~i~~~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
..+ ...++++|+|.++|+++++ ++|+ ...+.|..+. +++.+++.+...
T Consensus 103 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~-~~l~~~i~~~~~ 156 (164)
T 2h30_A 103 LPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINE-AQALALIRNPNA 156 (164)
T ss_dssp SCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCH-HHHHHHHHCTTC
T ss_pred ceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCH-HHHHHHHHHHHH
Confidence 122 5679999999999999999 5677 4457787774 489999887643
No 236
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.13 E-value=1.7e-10 Score=91.34 Aligned_cols=82 Identities=10% Similarity=0.247 Sum_probs=67.2
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC----------------------------ChhhHHhhCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----------------------------DPRYARKWGV 154 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~----------------------------~~~l~~~~~i 154 (346)
.+++++|.||++||++|+.+.|.+.++++.+...++.++.++ ...++++|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 457899999999999999999999999999864456666553 3479999999
Q ss_pred CCcceEEEE-ecCC-cceecCCcchhHHHHHHH
Q psy160 155 TKLPAVVYF-RHRF-PSIYRGDLSEEEEVLQWL 185 (346)
Q Consensus 155 ~~~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi 185 (346)
.++|+++++ ++|+ ...+.|..+.+ .+.+++
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l 144 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAE-QLKEWT 144 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHH-HHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHH-HHHHhh
Confidence 999999999 5677 34688887744 787776
No 237
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.12 E-value=2.5e-10 Score=90.74 Aligned_cols=86 Identities=8% Similarity=0.116 Sum_probs=68.1
Q ss_pred hcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC------------------------------ChhhHHh
Q psy160 102 EENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA------------------------------DPRYARK 151 (346)
Q Consensus 102 ~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~------------------------------~~~l~~~ 151 (346)
.++++++|.||++||++|+.+.|.+.++++.+.+. +.++.++ ...++++
T Consensus 27 ~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 105 (148)
T 2b5x_A 27 IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDA 105 (148)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHH
T ss_pred cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHH
Confidence 35689999999999999999999999999988553 5555442 3479999
Q ss_pred hCCCCcceEEEE-ecCC-cceecCCcchhHHHHHHHhhcc
Q psy160 152 WGVTKLPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 152 ~~i~~~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
|+|.++|+++++ ++|+ ...+.|..+.+ ++.+++.+..
T Consensus 106 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~l 144 (148)
T 2b5x_A 106 FENEYVPAYYVFDKTGQLRHFQAGGSGMK-MLEKRVNRVL 144 (148)
T ss_dssp TCCCCSSEEEEECTTCBEEEEEESCSTTH-HHHHHHHHHH
T ss_pred hCCCCCCEEEEECCCCcEEEEecCCCCHH-HHHHHHHHHH
Confidence 999999999999 5677 34577876644 7888877643
No 238
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.12 E-value=1.1e-10 Score=103.45 Aligned_cols=88 Identities=15% Similarity=0.055 Sum_probs=65.8
Q ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-------ChhhHHhhCCCCcceEEEEecC
Q psy160 94 RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-------DPRYARKWGVTKLPAVVYFRHR 166 (346)
Q Consensus 94 ~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-------~~~l~~~~~i~~~Ptl~~~~~g 166 (346)
...+.+.+++.. +|+||||||+||+++.|.|++++++++ .++++ ++++|++++|+++||+++ +|
T Consensus 189 ~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~-----~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G 259 (291)
T 3kp9_A 189 AVGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGITSYPTWII--NG 259 (291)
T ss_dssp HHHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSC-----EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT
T ss_pred HHHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcC-----EEEEeecCchhhHHHHHHHcCCcccCeEEE--CC
Confidence 345555555544 689999999999999999999997753 34443 679999999999999655 77
Q ss_pred CcceecCCcchhHHHHHHHhhccccCc
Q psy160 167 FPSIYRGDLSEEEEVLQWLITQKTEDR 193 (346)
Q Consensus 167 ~~~~y~g~~~~~~~i~~fi~~~~~~~~ 193 (346)
+ .|.|.++.+ ++.+|+.-....+.
T Consensus 260 ~--~~~G~~~~~-~L~~~l~~~~~~~~ 283 (291)
T 3kp9_A 260 R--TYTGVRSLE-ALAVASGYPLEEGR 283 (291)
T ss_dssp E--EEESCCCHH-HHHHHTCCCC----
T ss_pred E--EecCCCCHH-HHHHHHCCCCccch
Confidence 6 499998855 89999876554433
No 239
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.11 E-value=2.7e-10 Score=91.36 Aligned_cols=87 Identities=15% Similarity=0.163 Sum_probs=69.5
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---------------------------ChhhHHhhC--
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---------------------------DPRYARKWG-- 153 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---------------------------~~~l~~~~~-- 153 (346)
.+++++|.||++||++|+.+.|.+.++++.+...++.++.++ ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 568899999999999999999999999999865566666543 235778899
Q ss_pred CCCcceEEEEe-cCC-cceecCCcchhHHHHHHHhhccc
Q psy160 154 VTKLPAVVYFR-HRF-PSIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 154 i~~~Ptl~~~~-~g~-~~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
+.++|+++++. +|+ ...+.|..+.+ ++.+++++...
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~l~~ 140 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEK-SLTDAVKLAHS 140 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHH-HHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHH-HHHHHHHHHHH
Confidence 99999999984 576 45688888744 88888876543
No 240
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.11 E-value=4.1e-10 Score=88.07 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=67.5
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--------------------------ChhhHHhhCCCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------DPRYARKWGVTK 156 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--------------------------~~~l~~~~~i~~ 156 (346)
.+++++|.||++||++|+.+.|.+.++++.+. ++.++.++ ...++++|+|.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 101 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC
Confidence 45789999999999999999999999999886 45555433 356899999999
Q ss_pred cceEEEEe-cCCcceecCCcchhHHHHHHHhhc
Q psy160 157 LPAVVYFR-HRFPSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 157 ~Ptl~~~~-~g~~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+|+++++. +|+...+.|..+.+ ++.+++.+.
T Consensus 102 ~P~~~~id~~g~i~~~~g~~~~~-~l~~~l~~~ 133 (136)
T 1zzo_A 102 QPAYAFVDPHGNVDVVRGRMSQD-ELTRRVTAL 133 (136)
T ss_dssp SSEEEEECTTCCEEEEESCCCHH-HHHHHHHHH
T ss_pred CceEEEECCCCCEEEEecCCCHH-HHHHHHHHH
Confidence 99999995 67744788887744 888888764
No 241
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.10 E-value=4.2e-11 Score=96.13 Aligned_cols=79 Identities=9% Similarity=0.079 Sum_probs=57.9
Q ss_pred HHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhh--cCcCceEEEEE--cChhhhhhCCCccccEEEEEe-CCeEEE
Q psy160 201 MLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDE--CDIYGIHMVKI--QDPQLAKRYSIKTFPALVYFR-NGNPLI 275 (346)
Q Consensus 201 ~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~--~~~~~i~~~~i--~~~~~~~~~~i~~~Pti~~~~-~g~~~~ 275 (346)
.++...+++++++|.|||+||++|+.|.|.+.+.++. +.+.++..+.+ +..+.+..+++.++||+++|+ +|+.+.
T Consensus 36 al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~ 115 (151)
T 3ph9_A 36 GLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRA 115 (151)
T ss_dssp HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCT
T ss_pred HHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEE
Confidence 3445566789999999999999999999999865322 11114555666 345678899999999999998 887542
Q ss_pred -eecC
Q psy160 276 -FEGE 279 (346)
Q Consensus 276 -y~g~ 279 (346)
..|.
T Consensus 116 ~~~G~ 120 (151)
T 3ph9_A 116 DIAGR 120 (151)
T ss_dssp TCCCS
T ss_pred EEeCC
Confidence 3444
No 242
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.10 E-value=2.7e-10 Score=85.42 Aligned_cols=73 Identities=18% Similarity=0.344 Sum_probs=59.3
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC-ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS-DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWL 77 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~~i 77 (346)
+.|+++||+.|+.+.+.|++++++++ ..+..+.++ ++++..+|+++ .|++++|.+|..+ ..|..+. +.|.+||
T Consensus 33 v~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-~~g~~~~-~~L~~~L 106 (107)
T 2fgx_A 33 VVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-CHYFLDS-DVIGAYL 106 (107)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-ECSSCCC-HHHHHHH
T ss_pred EEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-EecCCCH-HHHHHHh
Confidence 47999999999999999999988763 334445665 78999999997 9999999999876 4576666 4888876
No 243
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.09 E-value=1.4e-10 Score=95.12 Aligned_cols=79 Identities=14% Similarity=0.271 Sum_probs=64.6
Q ss_pred EccHHHHHHHHhccceEEEEEEcCCChhhHHHHHH-H--HHHHhhcCcCceEEEEE---cChhhhhhC--------CCcc
Q psy160 196 LITRVMLETMVEETQYLAVYFYKLNCNICDQILEG-L--EKVDDECDIYGIHMVKI---QDPQLAKRY--------SIKT 261 (346)
Q Consensus 196 ~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~-~--~~la~~~~~~~i~~~~i---~~~~~~~~~--------~i~~ 261 (346)
....+.++....++++++|.||++||++|+.|.+. | .++++.+++ ++.++++ +.+++.+.| ++.+
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g 104 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRGG 104 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCCC
Confidence 34578888888889999999999999999999983 3 466776664 6778888 567888888 9999
Q ss_pred ccEEEEEe-CCeEEE
Q psy160 262 FPALVYFR-NGNPLI 275 (346)
Q Consensus 262 ~Pti~~~~-~g~~~~ 275 (346)
+|+++++. +|+++.
T Consensus 105 ~Pt~v~l~~dG~~v~ 119 (173)
T 3ira_A 105 WPLNIIMTPGKKPFF 119 (173)
T ss_dssp SSEEEEECTTSCEEE
T ss_pred CcceeeECCCCCcee
Confidence 99999996 787653
No 244
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.08 E-value=2.9e-10 Score=91.80 Aligned_cols=74 Identities=22% Similarity=0.491 Sum_probs=58.3
Q ss_pred HhccceEEEEEE-cCCChhhHHHHHHH---HHHHhhcCcCceEEEEE---cC-----------hhhhhhCCCccccEEEE
Q psy160 206 VEETQYLAVYFY-KLNCNICDQILEGL---EKVDDECDIYGIHMVKI---QD-----------PQLAKRYSIKTFPALVY 267 (346)
Q Consensus 206 ~~~~~~~lv~F~-~~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i---~~-----------~~~~~~~~i~~~Pti~~ 267 (346)
...+++++|.|| ++||++|+.+.|.+ .++++.+.. ++.++.+ .. ..++++|+|.++||+++
T Consensus 44 ~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~ 122 (154)
T 2ju5_A 44 KQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVF 122 (154)
T ss_dssp HHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred HhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEE
Confidence 345789999999 99999999999999 677665543 6777777 22 37899999999999999
Q ss_pred E-eCCeEEEeecCc
Q psy160 268 F-RNGNPLIFEGEN 280 (346)
Q Consensus 268 ~-~~g~~~~y~g~~ 280 (346)
+ ++|+.+...|..
T Consensus 123 ~d~~G~~~~~~G~~ 136 (154)
T 2ju5_A 123 IDAEGKQLARMGFE 136 (154)
T ss_dssp ECTTCCEEEEECCC
T ss_pred EcCCCCEEEEecCC
Confidence 9 788755433655
No 245
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.08 E-value=6.5e-10 Score=89.11 Aligned_cols=85 Identities=14% Similarity=0.230 Sum_probs=68.2
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe-------------------------C-ChhhHHhhCCCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM-------------------------A-DPRYARKWGVTK 156 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~-------------------------~-~~~l~~~~~i~~ 156 (346)
.+++++|.|+++||++|+...|.+.++++.+...++.++.+ + ...+++.|+|.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 56889999999999999999999999999986555555432 2 567999999999
Q ss_pred cceEEEE-ecCC-cceecCCcchhHHHHHHHhhc
Q psy160 157 LPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 157 ~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+|+++++ ++|+ ...|.|..+.+ .+.+++.+.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~l 139 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFG-KLYQEIDTA 139 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHH-HHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHH-HHHHHHHHH
Confidence 9999999 5677 44588877644 788887764
No 246
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.07 E-value=4.4e-10 Score=84.27 Aligned_cols=76 Identities=8% Similarity=0.125 Sum_probs=62.3
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHH
Q psy160 106 FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQW 184 (346)
Q Consensus 106 ~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~f 184 (346)
..++.|+++||++|+.+.|.+++++.++. ..+..++++ ++.++.+|+++ .|++++|.+|+.. ..|..+.+ .|.+|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-~~g~~~~~-~L~~~ 105 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-CHYFLDSD-VIGAY 105 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-ECSSCCCH-HHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-EecCCCHH-HHHHH
Confidence 46999999999999999999999988753 446666666 78999999997 9999999988765 45776644 78887
Q ss_pred H
Q psy160 185 L 185 (346)
Q Consensus 185 i 185 (346)
+
T Consensus 106 L 106 (107)
T 2fgx_A 106 L 106 (107)
T ss_dssp H
T ss_pred h
Confidence 6
No 247
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.05 E-value=6.6e-10 Score=88.96 Aligned_cols=87 Identities=14% Similarity=0.185 Sum_probs=68.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------ChhhHHhhCCCCc
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------DPRYARKWGVTKL 157 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------~~~l~~~~~i~~~ 157 (346)
.+++++|.||++||++|+.+.|.+.++++.+...++.++.+ + ...+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 45789999999999999999999999999886544555544 3 2378999999999
Q ss_pred ceEEEE-ecCC-cceecCCcchhHHHHHHHhhccc
Q psy160 158 PAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 158 Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~~~ 190 (346)
|+++++ ++|+ ...+.|..+. +.+.+++.....
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~-~~l~~~l~~ll~ 138 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTE-SMIHDYMNLIKP 138 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCH-HHHHHHHHHHSC
T ss_pred CeEEEECCCCcEEEEEeCCCCH-HHHHHHHHHHHh
Confidence 999999 5676 4457788764 488888877543
No 248
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.05 E-value=1.4e-10 Score=95.31 Aligned_cols=84 Identities=14% Similarity=0.232 Sum_probs=58.9
Q ss_pred ccHHHHHHHH----hccceEEEEEEcCCChhhHHHHHHH---HHHHhhcCcCceEEEEE---cChhh-------------
Q psy160 197 ITRVMLETMV----EETQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI---QDPQL------------- 253 (346)
Q Consensus 197 l~~~~~~~~~----~~~~~~lv~F~~~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i---~~~~~------------- 253 (346)
.+..++++.+ .++++++|.|||+||++|+.+.+.+ .++.+.+++ ++.++.+ +..++
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTER 109 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEEE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchhh
Confidence 3445555543 4678999999999999999975444 555555543 5677776 22222
Q ss_pred -------------hhhCCCccccEEEEE-eCCeEE-EeecCcc
Q psy160 254 -------------AKRYSIKTFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 254 -------------~~~~~i~~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
+++|+|.++||++++ ++|+.+ .+.|...
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~ 152 (172)
T 3f9u_A 110 TLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDE 152 (172)
T ss_dssp EEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCC
T ss_pred hhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCC
Confidence 788999999999999 688754 3556664
No 249
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.04 E-value=9.1e-10 Score=87.12 Aligned_cols=74 Identities=20% Similarity=0.307 Sum_probs=62.3
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---c-------------------------ChhhhhhCCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q-------------------------DPQLAKRYSI 259 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~-------------------------~~~~~~~~~i 259 (346)
.+++++|.||++||++|+.+.|.+.++++++...++.++.+ . +..+++.|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 56799999999999999999999999999998447888877 1 3478999999
Q ss_pred ccccEEEEE-eCCeEE-EeecCcc
Q psy160 260 KTFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 260 ~~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
.++|+++++ ++|+.+ .+.|..+
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~ 136 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMT 136 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCC
T ss_pred CccCeEEEEcCCCcEEEEEcCCcC
Confidence 999999999 678753 5677765
No 250
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.03 E-value=1.3e-09 Score=85.10 Aligned_cols=83 Identities=16% Similarity=0.234 Sum_probs=66.7
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe------------------------------C-ChhhHHh
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM------------------------------A-DPRYARK 151 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~------------------------------~-~~~l~~~ 151 (346)
.+++++|.||++||++|+...|.+.++++.+. .++.++.+ + ...++++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAG-DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 46789999999999999999999999999853 34666655 1 4468999
Q ss_pred hCCCCcceEEEE-ecCC-cceecCCcchhHHHHHHHhh
Q psy160 152 WGVTKLPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 152 ~~i~~~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~ 187 (346)
|+|.++|+++++ ++|+ ...+.|..+. +++.+++.+
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~~g~~~~-~~l~~~l~~ 136 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTHPGFMEK-DAILQTLKE 136 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEEESCCCH-HHHHHHHHH
T ss_pred cCcccCCeEEEECCCCcEEEeecCCCcH-HHHHHHHHh
Confidence 999999999999 5677 4467888774 478888765
No 251
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.02 E-value=8.7e-10 Score=86.29 Aligned_cols=72 Identities=19% Similarity=0.423 Sum_probs=60.8
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---c----------------------ChhhhhhCCCccc
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q----------------------DPQLAKRYSIKTF 262 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~----------------------~~~~~~~~~i~~~ 262 (346)
.+++++|.||++||++|+.+.|.+.++++++. ++.++.+ . +..+++.|++.++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQ 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCC
Confidence 45799999999999999999999999999987 5677766 2 4678999999999
Q ss_pred cEEEEE-eCCeEEEee---cCcc
Q psy160 263 PALVYF-RNGNPLIFE---GENK 281 (346)
Q Consensus 263 Pti~~~-~~g~~~~y~---g~~~ 281 (346)
|+++++ ++|+...+. |..+
T Consensus 101 P~~~lid~~G~i~~~~~~~g~~~ 123 (136)
T 1lu4_A 101 PAFVFYRADGTSTFVNNPTAAMS 123 (136)
T ss_dssp SEEEEECTTSCEEEECCSSSCCC
T ss_pred CEEEEECCCCcEEEEEcCCCccC
Confidence 999999 578766677 6654
No 252
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.02 E-value=1.4e-10 Score=94.73 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=59.4
Q ss_pred HHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc-CceEEEEE-cChh-hhhhCCC--ccccEEEEE-eCCeE
Q psy160 200 VMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI-QDPQ-LAKRYSI--KTFPALVYF-RNGNP 273 (346)
Q Consensus 200 ~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i-~~~~-~~~~~~i--~~~Pti~~~-~~g~~ 273 (346)
+.++.....+++++|.||++||++|+.+.|.|.++++.... ..+..+.+ .+.+ ++..|++ .++||+++| ++|+.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 55666667789999999999999999999999998766542 23444444 3444 7788888 669999999 78875
Q ss_pred EE-eecC
Q psy160 274 LI-FEGE 279 (346)
Q Consensus 274 ~~-y~g~ 279 (346)
+. +.|.
T Consensus 117 ~~~~~G~ 123 (164)
T 1sen_A 117 HPEIINE 123 (164)
T ss_dssp CTTCCCT
T ss_pred EEEEeCC
Confidence 43 4553
No 253
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.02 E-value=1.5e-09 Score=88.04 Aligned_cols=86 Identities=14% Similarity=0.173 Sum_probs=67.8
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhh---------------------------
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKW--------------------------- 152 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~--------------------------- 152 (346)
.+++++|.||++||++|+.+.|.+.++++.+...++.++.++ ....++++
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 568899999999999999999999999999976567776653 34555555
Q ss_pred CCCCcceEEEE-ecCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 153 GVTKLPAVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 153 ~i~~~Ptl~~~-~~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
++.++|+++++ ++|+. ..+.|..+. +++.+++.+..
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~-~~l~~~l~~~l 150 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSK-ADFDRIVKMAL 150 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCH-HHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCH-HHHHHHHHHHH
Confidence 89999999998 56773 457788764 47888887654
No 254
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.01 E-value=9.6e-10 Score=79.48 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=58.3
Q ss_pred EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHHHh
Q psy160 108 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLI 186 (346)
Q Consensus 108 lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~ 186 (346)
++.|+++||++|+.+.|.+++++..+ ..-++++ ++.++.+||++ .||+++ .+|+.+. |..+ .+.|.+++.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~--g~~~-~~~L~~~l~ 73 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD--WPFD-APRLRAWLD 73 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE--SCCC-HHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe--CCCC-HHHHHHHHH
Confidence 78999999999999999999887652 2334555 78999999998 999998 7887653 7766 448999987
Q ss_pred hcc
Q psy160 187 TQK 189 (346)
Q Consensus 187 ~~~ 189 (346)
...
T Consensus 74 ~~~ 76 (87)
T 1ttz_A 74 AAP 76 (87)
T ss_dssp TCC
T ss_pred HHH
Confidence 654
No 255
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.01 E-value=3.7e-09 Score=91.78 Aligned_cols=146 Identities=14% Similarity=0.221 Sum_probs=92.3
Q ss_pred cCCcEEEEEE-CCCChhHH-HHHHHHHHHHhhccCCCc-EEEEe--C-----------------------ChhhHHhhCC
Q psy160 103 ENEFVTVFFY-ETDHKDSV-KVLERLEKIDGETDNMDI-TFVKM--A-----------------------DPRYARKWGV 154 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~-~~~~~~~~~a~~~~~~~i-~~~~~--~-----------------------~~~l~~~~~i 154 (346)
.++++++.|| +.||++|. .-+|.+.+++++++..++ .++-+ | ...+++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 4567888898 99999999 899999999988854455 44432 2 2346667776
Q ss_pred C-----------CcceEEEEecCC-cceecCCc--------chhHHHHHHHhhccccCcEEEccHHHHHHHHhccceEEE
Q psy160 155 T-----------KLPAVVYFRHRF-PSIYRGDL--------SEEEEVLQWLITQKTEDRIELITRVMLETMVEETQYLAV 214 (346)
Q Consensus 155 ~-----------~~Ptl~~~~~g~-~~~y~g~~--------~~~~~i~~fi~~~~~~~~v~~l~~~~~~~~~~~~~~~lv 214 (346)
. ..|+.+++++|+ ...+.|.. ...+++++.+.... + ....++
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~----------------i--~~~~i~ 173 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH----------------Q--VQESIS 173 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS----------------C--CCCCEE
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc----------------c--ccceEE
Confidence 5 236555556565 22233321 11234555444321 0 123366
Q ss_pred EEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cC---hhhhhhCCCccccEEEEEeCCeE
Q psy160 215 YFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD---PQLAKRYSIKTFPALVYFRNGNP 273 (346)
Q Consensus 215 ~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~---~~~~~~~~i~~~Pti~~~~~g~~ 273 (346)
.|..+||++|++....+++..-. .....+ .+ .++.+.++..++|++. .+|+.
T Consensus 174 ly~~~~Cp~C~~a~~~L~~~~i~-----~~~~~i~~~~~~~~l~~~~g~~~vP~~~--~~g~~ 229 (241)
T 1nm3_A 174 IFTKPGCPFCAKAKQLLHDKGLS-----FEEIILGHDATIVSVRAVSGRTTVPQVF--IGGKH 229 (241)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCC-----CEEEETTTTCCHHHHHHHTCCSSSCEEE--ETTEE
T ss_pred EEECCCChHHHHHHHHHHHcCCc-----eEEEECCCchHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 78899999999998888876432 334444 22 3477788999999974 46754
No 256
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.00 E-value=6.1e-10 Score=91.24 Aligned_cols=78 Identities=14% Similarity=0.165 Sum_probs=62.9
Q ss_pred ecCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHH-H--HHHHhhccCCCcEEEEeC---ChhhHHhh--------CCCC
Q psy160 91 EVNRRMLDKLLEENEFVTVFFYETDHKDSVKVLER-L--EKIDGETDNMDITFVKMA---DPRYARKW--------GVTK 156 (346)
Q Consensus 91 ~l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~-~--~~~a~~~~~~~i~~~~~~---~~~l~~~~--------~i~~ 156 (346)
..+++.|+....++++++|.|+++||++|+.|.|+ | .++++.++. ++.++++| .+++++.| |+.+
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g 104 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRGG 104 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCCC
Confidence 44688899988999999999999999999999993 3 456666543 36677766 66888888 9999
Q ss_pred cceEEEEe-cCCcc
Q psy160 157 LPAVVYFR-HRFPS 169 (346)
Q Consensus 157 ~Ptl~~~~-~g~~~ 169 (346)
+||++++. +|+++
T Consensus 105 ~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 105 WPLNIIMTPGKKPF 118 (173)
T ss_dssp SSEEEEECTTSCEE
T ss_pred CcceeeECCCCCce
Confidence 99999997 67643
No 257
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.00 E-value=1.3e-09 Score=87.85 Aligned_cols=86 Identities=10% Similarity=0.076 Sum_probs=67.3
Q ss_pred cCCcEEEEEECCCChhHHHH-HHHHHHHHhhccCCCcEEEEeC-------------------------------Ch----
Q psy160 103 ENEFVTVFFYETDHKDSVKV-LERLEKIDGETDNMDITFVKMA-------------------------------DP---- 146 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~-~~~~~~~a~~~~~~~i~~~~~~-------------------------------~~---- 146 (346)
.+++++|.||++||++|+.. +|.+.++++++...++.++.++ ..
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 46889999999999999995 9999999999965566666543 11
Q ss_pred -hhHHhhCCCCcceEEEEe-cCC-cceecCCcchhHHHHHHHhhcc
Q psy160 147 -RYARKWGVTKLPAVVYFR-HRF-PSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 147 -~l~~~~~i~~~Ptl~~~~-~g~-~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
.+++.|+|.++|+++++. +|+ ...+.|..+.+ .+.+.+.+..
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSEL-LLGAEIATLL 151 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHH-HHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHH-HHHHHHHHHh
Confidence 589999999999999994 576 44577887744 7777776643
No 258
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.00 E-value=1.3e-09 Score=87.55 Aligned_cols=85 Identities=14% Similarity=0.205 Sum_probs=69.8
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe----------------------------CChhhHHhhCCCC
Q psy160 105 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM----------------------------ADPRYARKWGVTK 156 (346)
Q Consensus 105 ~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~----------------------------~~~~l~~~~~i~~ 156 (346)
++++|.||++||++|+...|.+.++++.+ +..+..+.+ ....++++|+|.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG 109 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc
Confidence 78999999999999999999999999998 555666666 3467899999999
Q ss_pred cceEEEE-ecCC-cceecCCcchhHHHHHHHhhcccc
Q psy160 157 LPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 157 ~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
+|+++++ ++|+ ...+.|..+ .+++.+++++....
T Consensus 110 ~P~~~lid~~G~i~~~~~g~~~-~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGRAG-REALLDALLLAGAD 145 (154)
T ss_dssp SCEEEEECTTSEEEEEEESBCC-HHHHHHHHHHTTCC
T ss_pred ccEEEEECCCCCEEEEEcCCCC-HHHHHHHHHhccCc
Confidence 9998888 5676 445788877 44899999887653
No 259
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.99 E-value=6.1e-10 Score=90.36 Aligned_cols=99 Identities=13% Similarity=0.278 Sum_probs=68.7
Q ss_pred cEEEccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE------------------------
Q psy160 193 RIELITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI------------------------ 248 (346)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------------------ 248 (346)
.+..++++.+......+++++|.||++||++|+.+.|.+.+++++++..++.++.+
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 34445554443332356799999999999999999999999998864323333222
Q ss_pred -------cChhhhhhCCCccccEEEEE-eCCeEE-EeecCccccccchhhhhhhc
Q psy160 249 -------QDPQLAKRYSIKTFPALVYF-RNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 249 -------~~~~~~~~~~i~~~Pti~~~-~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
.+..+++.|+|.++|+++++ ++|+.+ .+.|..+.+. +..+++.
T Consensus 102 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~---l~~~i~~ 153 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQ---ALALIRN 153 (164)
T ss_dssp TSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHH---HHHHHHC
T ss_pred cceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHH---HHHHHHH
Confidence 35678999999999999999 678754 4667664322 5555554
No 260
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.98 E-value=2.4e-09 Score=86.45 Aligned_cols=86 Identities=12% Similarity=0.141 Sum_probs=67.8
Q ss_pred cCCcEEEEEECCCChhHHH-HHHHHHHHHhhccCCCcEEEEeC-------------------------------Chh---
Q psy160 103 ENEFVTVFFYETDHKDSVK-VLERLEKIDGETDNMDITFVKMA-------------------------------DPR--- 147 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~-~~~~~~~~a~~~~~~~i~~~~~~-------------------------------~~~--- 147 (346)
.+++++|.||++||++|+. +.|.+.++++.+.+.++.++.++ ...
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4689999999999999999 69999999999966556666542 222
Q ss_pred ---hHHhhCCCCcceEEEEe-cCC-cceecCCcchhHHHHHHHhhcc
Q psy160 148 ---YARKWGVTKLPAVVYFR-HRF-PSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 148 ---l~~~~~i~~~Ptl~~~~-~g~-~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
+++.|+|.++|+++++. +|+ ...+.|..+.+ .+.+.+.+..
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~ll 154 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDF-VLGLLLGSLL 154 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHH-HHHHHHHHHH
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCCHH-HHHHHHHHHH
Confidence 89999999999999995 576 44577887744 7887776643
No 261
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.98 E-value=8.2e-10 Score=86.29 Aligned_cols=72 Identities=15% Similarity=0.308 Sum_probs=60.0
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc--------------------------ChhhhhhCCCcc
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ--------------------------DPQLAKRYSIKT 261 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~--------------------------~~~~~~~~~i~~ 261 (346)
.+++++|.||++||++|+.+.+.+.++++++. ++.++.+. +..+++.|++.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 101 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC
Confidence 45789999999999999999999999999987 56666661 356789999999
Q ss_pred ccEEEEE-eCCeEEEeecCcc
Q psy160 262 FPALVYF-RNGNPLIFEGENK 281 (346)
Q Consensus 262 ~Pti~~~-~~g~~~~y~g~~~ 281 (346)
+|+++++ ++|+.+.+.|..+
T Consensus 102 ~P~~~~id~~g~i~~~~g~~~ 122 (136)
T 1zzo_A 102 QPAYAFVDPHGNVDVVRGRMS 122 (136)
T ss_dssp SSEEEEECTTCCEEEEESCCC
T ss_pred CceEEEECCCCCEEEEecCCC
Confidence 9999999 4787667788765
No 262
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.97 E-value=1.6e-09 Score=86.83 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=61.0
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-------------------------ChhhhhhCC--
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-------------------------DPQLAKRYS-- 258 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-------------------------~~~~~~~~~-- 258 (346)
.+++++|.||++||++|+.+.|.+.++++++++.++.++.+ + ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 46799999999999999999999999999997657888877 2 234678899
Q ss_pred CccccEEEEE-eCCeE-EEeecCccc
Q psy160 259 IKTFPALVYF-RNGNP-LIFEGENKI 282 (346)
Q Consensus 259 i~~~Pti~~~-~~g~~-~~y~g~~~~ 282 (346)
+.++|+++++ ++|+. ..+.|..+.
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~ 128 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNE 128 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCH
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCH
Confidence 9999999888 57764 457787653
No 263
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.97 E-value=1.8e-09 Score=85.74 Aligned_cols=84 Identities=14% Similarity=0.368 Sum_probs=64.1
Q ss_pred ccHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc---------------------------
Q psy160 197 ITRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ--------------------------- 249 (346)
Q Consensus 197 l~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~--------------------------- 249 (346)
++++.+......+++++|.||++||++|+.+.|.+.++++++.+ .+.++.+.
T Consensus 17 ~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2b5x_A 17 LNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-QLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIF 95 (148)
T ss_dssp ESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEE
T ss_pred ccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceE
Confidence 34443333223567999999999999999999999999999886 37777662
Q ss_pred ---ChhhhhhCCCccccEEEEE-eCCeEE-EeecCcc
Q psy160 250 ---DPQLAKRYSIKTFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 250 ---~~~~~~~~~i~~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
+..+++.|+|.++|+++++ ++|+.+ .+.|..+
T Consensus 96 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 132 (148)
T 2b5x_A 96 VDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSG 132 (148)
T ss_dssp ECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCST
T ss_pred ECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCC
Confidence 2468999999999999999 688754 4667654
No 264
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.96 E-value=1.4e-09 Score=87.06 Aligned_cols=86 Identities=12% Similarity=0.173 Sum_probs=67.7
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---Ch-----------------------hhHHhhCCCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DP-----------------------RYARKWGVTK 156 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~-----------------------~l~~~~~i~~ 156 (346)
.+++++|.|+++||++|+.+.|.+.++++.+.+.++.++.++ .. .+++.|+|.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 457899999999999999999999999998865556666543 22 6889999999
Q ss_pred cceEEEEe-cCCc-ceecCCcchhHHHHHHHhhcc
Q psy160 157 LPAVVYFR-HRFP-SIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 157 ~Ptl~~~~-~g~~-~~y~g~~~~~~~i~~fi~~~~ 189 (346)
+|+++++. +|+. ..+.|..+.+ .+.+++.+..
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~~ 142 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDP-KTAEKFNELL 142 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCH-HHHHHHHHHH
T ss_pred CCEEEEECCCCeEEEccCCCCCHH-HHHHHHHHHh
Confidence 99999997 6773 3466766544 7888887654
No 265
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.96 E-value=2.8e-09 Score=85.21 Aligned_cols=88 Identities=13% Similarity=0.165 Sum_probs=67.8
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-Ch----------------------hhHHhhCCCCc
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-DP----------------------RYARKWGVTKL 157 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-~~----------------------~l~~~~~i~~~ 157 (346)
.+++++|.|+++||++|+.+.|.+.++++.+...++.++.+ + .. .+++.|+|.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 45789999999999999999999999999996555555544 3 22 68889999999
Q ss_pred ceEEEE-ecCC-cceecCCcc-hhHHHHHHHhhccc
Q psy160 158 PAVVYF-RHRF-PSIYRGDLS-EEEEVLQWLITQKT 190 (346)
Q Consensus 158 Ptl~~~-~~g~-~~~y~g~~~-~~~~i~~fi~~~~~ 190 (346)
|+++++ ++|+ ...+.|... ..+++.+++.+...
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~ 142 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALG 142 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHc
Confidence 999888 5676 344667543 23478888887654
No 266
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.96 E-value=1.2e-08 Score=88.39 Aligned_cols=139 Identities=14% Similarity=0.190 Sum_probs=84.4
Q ss_pred Ceec-CCCChhhH-HHHHHHHHHHhhhcccCC-eEEEc--C-----------------------ChHHHHhcCCC-----
Q psy160 1 MYIN-DENCPECD-DILEELEHIDGDADQYGI-DMVKI--S-----------------------DTEAAAKYNII----- 47 (346)
Q Consensus 1 v~Fy-~~~C~~c~-~~~~~~~~~a~~~~~~~i-~~~~~--~-----------------------~~~~c~~~~i~----- 47 (346)
|.|| +.||++|. .-+|.|.++++.+++.|+ .++.+ | +.++++.||+.
T Consensus 38 l~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~ 117 (241)
T 1nm3_A 38 VFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKED 117 (241)
T ss_dssp EEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTT
T ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCceeeccc
Confidence 4687 99999999 889999999999877778 66554 2 22455555553
Q ss_pred ------CCCeEEEEeCCcee-eecCCC--------CCHHHHHHHHhccCCccccCceeecCHHHHHHHHhcCCcEEEEEE
Q psy160 48 ------NLPSLVYFRKQVPL-LYDGDL--------FDEEKILTWLTSQDVFEIKNEIEEVNRRMLDKLLEENEFVTVFFY 112 (346)
Q Consensus 48 ------~~Ptl~~f~~~~~~-~y~G~~--------~~~~~i~~~i~~~~~p~~~~~v~~l~~~~~~~~~~~~~~~lv~F~ 112 (346)
..|+.++.++|.-. .+.|.. ...+++++.+.... -....+++|.
T Consensus 118 ~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~---------------------i~~~~i~ly~ 176 (241)
T 1nm3_A 118 LGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH---------------------QVQESISIFT 176 (241)
T ss_dssp TTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS---------------------CCCCCEEEEE
T ss_pred ccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc---------------------cccceEEEEE
Confidence 12443333444321 122221 11123333322110 0134578899
Q ss_pred CCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC----hhhHHhhCCCCcceEEEEecCC
Q psy160 113 ETDHKDSVKVLERLEKIDGETDNMDITFVKMAD----PRYARKWGVTKLPAVVYFRHRF 167 (346)
Q Consensus 113 ~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~----~~l~~~~~i~~~Ptl~~~~~g~ 167 (346)
.+||++|++....+++..- .+..+.++. ..+.+.+|..++|++.+ +|+
T Consensus 177 ~~~Cp~C~~a~~~L~~~~i-----~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~--~g~ 228 (241)
T 1nm3_A 177 KPGCPFCAKAKQLLHDKGL-----SFEEIILGHDATIVSVRAVSGRTTVPQVFI--GGK 228 (241)
T ss_dssp CSSCHHHHHHHHHHHHHTC-----CCEEEETTTTCCHHHHHHHTCCSSSCEEEE--TTE
T ss_pred CCCChHHHHHHHHHHHcCC-----ceEEEECCCchHHHHHHHHhCCCCcCEEEE--CCE
Confidence 9999999999888876532 344555541 35777899999999853 553
No 267
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.95 E-value=4.5e-09 Score=84.83 Aligned_cols=81 Identities=14% Similarity=0.265 Sum_probs=65.6
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---c-------------------ChhhhhhCCCccccEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q-------------------DPQLAKRYSIKTFPAL 265 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~-------------------~~~~~~~~~i~~~Pti 265 (346)
.+++++|.||++||++|+.+.+.+.++++++.+.++.++.+ . +..+++.|++.++|++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 45799999999999999999999999999998557888877 2 4688999999999998
Q ss_pred EEE-eCCeE-EEeecCccccccchh
Q psy160 266 VYF-RNGNP-LIFEGENKILKGTYI 288 (346)
Q Consensus 266 ~~~-~~g~~-~~y~g~~~~~~~~~~ 288 (346)
+++ ++|+. ..+.|....+....+
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~ 144 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVV 144 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHH
T ss_pred EEEcCCCCEEEEEeCCCccchHHHH
Confidence 877 67874 457787765554433
No 268
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.94 E-value=3.3e-09 Score=84.81 Aligned_cols=74 Identities=15% Similarity=0.366 Sum_probs=60.9
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---c----------------------ChhhhhhCCCccc
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---Q----------------------DPQLAKRYSIKTF 262 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~----------------------~~~~~~~~~i~~~ 262 (346)
.+++++|.||++||++|+.+.|.+.++.+++.+.++.++.+ . +..+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 45799999999999999999999999999987545777776 2 3478999999999
Q ss_pred cEEEEE-eCCeEE-EeecCcc
Q psy160 263 PALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 263 Pti~~~-~~g~~~-~y~g~~~ 281 (346)
|+++++ ++|+.+ .+.|..+
T Consensus 105 P~~~lid~~G~i~~~~~G~~~ 125 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMT 125 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCC
T ss_pred CeEEEECCCCcEEEEEeCCCC
Confidence 999999 688754 4667654
No 269
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.93 E-value=1.2e-09 Score=86.74 Aligned_cols=84 Identities=8% Similarity=0.151 Sum_probs=64.1
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-Chh-------------------------hHHhhCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-DPR-------------------------YARKWGV 154 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-~~~-------------------------l~~~~~i 154 (346)
.+++++|.||++||++|+.+.|.+.++++.+...++.++.+ + ... +++.|+|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 45789999999999999999999999999986545666654 3 334 8999999
Q ss_pred CCcceEEEE-ecCC-cceecCCcchhHHHHHHHhh
Q psy160 155 TKLPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 155 ~~~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~ 187 (346)
.++|+++++ ++|+ ...+.|... .+++++.+.+
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~-~~~~l~~l~~ 143 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYEN-LDDFLVQYEK 143 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGG-HHHHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHHH-HHHHHHHHHH
Confidence 999999999 4676 344566544 3356655543
No 270
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.91 E-value=4.1e-09 Score=83.65 Aligned_cols=83 Identities=13% Similarity=0.211 Sum_probs=63.5
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhc-cCCCcEEEEe--C--------------------------ChhhHHhhC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGET-DNMDITFVKM--A--------------------------DPRYARKWG 153 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~-~~~~i~~~~~--~--------------------------~~~l~~~~~ 153 (346)
.+++++|.||++||++|+.+.|.+.++++.+ ...++.++.+ + ...++++|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 5688999999999999999999999999998 6656666655 3 237899999
Q ss_pred CCCcceEEEE-ecCCcceecCCcchhHHHHHHHhhc
Q psy160 154 VTKLPAVVYF-RHRFPSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 154 i~~~Ptl~~~-~~g~~~~y~g~~~~~~~i~~fi~~~ 188 (346)
|.++|+++++ ++|+.. +... + .+.+.+++.+.
T Consensus 112 v~~~P~~~lid~~G~i~-~~~~-~-~~~l~~~l~~l 144 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKIL-ARDI-Q-GEALTGKLKEL 144 (148)
T ss_dssp CCSSSEEEEECTTSBEE-EESC-C-HHHHHHHHHHH
T ss_pred CCCcCEEEEECCCCeEE-EecC-C-HHHHHHHHHHH
Confidence 9999999999 456532 2222 3 33677776654
No 271
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.91 E-value=5.9e-09 Score=84.13 Aligned_cols=89 Identities=12% Similarity=0.272 Sum_probs=68.0
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC----------------------ChhhHHhhCCCCcceE
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----------------------DPRYARKWGVTKLPAV 160 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~----------------------~~~l~~~~~i~~~Ptl 160 (346)
.+++++|.||++||++|+...|.+.++++.+...++.++.++ ...+++.|+|.++|++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 457899999999999999999999999999965566666543 3579999999999998
Q ss_pred EEE-ecCC-cceecCCcc-hhHHHHHHHhhcccc
Q psy160 161 VYF-RHRF-PSIYRGDLS-EEEEVLQWLITQKTE 191 (346)
Q Consensus 161 ~~~-~~g~-~~~y~g~~~-~~~~i~~fi~~~~~~ 191 (346)
+++ ++|+ ...+.|... ...++++.+.+...+
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 887 4576 445777543 234788877776544
No 272
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.91 E-value=2e-09 Score=77.83 Aligned_cols=71 Identities=21% Similarity=0.411 Sum_probs=53.7
Q ss_pred EEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cChhhhhhCCCccccEEEEEeCCeEEEeecCccccccchhhhh
Q psy160 213 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQLAKRYSIKTFPALVYFRNGNPLIFEGENKILKGTYIGTY 291 (346)
Q Consensus 213 lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~~~~~~i~~~Pti~~~~~g~~~~y~g~~~~~~~~~~~~~ 291 (346)
++.|+++||++|+.+.|.+++++..+ ..-+.+ ++++++++|+++ +|++++ .+|+.+. |..+.+. +..+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~--g~~~~~~---L~~~ 71 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD--WPFDAPR---LRAW 71 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE--SCCCHHH---HHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe--CCCCHHH---HHHH
Confidence 67899999999999999999987653 222333 678999999998 999999 8898763 6654322 5555
Q ss_pred hhc
Q psy160 292 IST 294 (346)
Q Consensus 292 i~~ 294 (346)
++.
T Consensus 72 l~~ 74 (87)
T 1ttz_A 72 LDA 74 (87)
T ss_dssp HHT
T ss_pred HHH
Confidence 543
No 273
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.90 E-value=4.2e-09 Score=85.81 Aligned_cols=83 Identities=12% Similarity=0.074 Sum_probs=61.7
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe-----------------------C-ChhhHHhhCCCCcc
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM-----------------------A-DPRYARKWGVTKLP 158 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~-----------------------~-~~~l~~~~~i~~~P 158 (346)
++++++|.||++||++|+.+.|.+.++++. +..+..+.+ + ...++++|+|.++|
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 127 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAP 127 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccccC
Confidence 568899999999999999999999999876 333333332 2 45789999999999
Q ss_pred eEEEE-ecCCc-ceecCCcchhHHHHHHHhhc
Q psy160 159 AVVYF-RHRFP-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 159 tl~~~-~~g~~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
+.+++ ++|+. ..+.|..+.+ .+.+++.+.
T Consensus 128 ~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~ 158 (168)
T 2b1k_A 128 ETFLIDGNGIIRYRHAGDLNPR-VWEEEIKPL 158 (168)
T ss_dssp EEEEECTTSBEEEEEESCCCHH-HHHHTTHHH
T ss_pred EEEEECCCCeEEEEEeCCCCHH-HHHHHHHHH
Confidence 65555 56773 4577877644 777776654
No 274
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.89 E-value=5.1e-09 Score=85.05 Aligned_cols=82 Identities=13% Similarity=0.190 Sum_probs=65.0
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-------------------C----------------
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-------------------D---------------- 145 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-------------------~---------------- 145 (346)
.+++++|.|+++||++|+...|.+.++++.+. ++.++.+ + .
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 45889999999999999999999999999987 4666554 3 1
Q ss_pred ------hhhHHhhCCCCcceEEEEe-cCCcceecCCc-chhHHHHHHHhhc
Q psy160 146 ------PRYARKWGVTKLPAVVYFR-HRFPSIYRGDL-SEEEEVLQWLITQ 188 (346)
Q Consensus 146 ------~~l~~~~~i~~~Ptl~~~~-~g~~~~y~g~~-~~~~~i~~fi~~~ 188 (346)
..+++.|+|.++|+++++. +|+... .|.. + .+.+.+.+.+.
T Consensus 114 ~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~-~~~l~~~l~~l 162 (165)
T 3ha9_A 114 IMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPS-LGELESVIKSV 162 (165)
T ss_dssp EEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCC-HHHHHHHHHHC
T ss_pred eEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCC-HHHHHHHHHHH
Confidence 2789999999999999995 565444 7777 5 44788877654
No 275
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.89 E-value=6.1e-09 Score=84.90 Aligned_cols=69 Identities=17% Similarity=0.380 Sum_probs=57.3
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc-CceEEEEE---cC------------------------hhhhhhCCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI---QD------------------------PQLAKRYSI 259 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i---~~------------------------~~~~~~~~i 259 (346)
.+++++|.||++||++|+.+.|.+.++++++++ .++.++.+ .. ..+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 357999999999999999999999999999974 36777766 22 578999999
Q ss_pred ccccEEEEEe-C-CeEEEe
Q psy160 260 KTFPALVYFR-N-GNPLIF 276 (346)
Q Consensus 260 ~~~Pti~~~~-~-g~~~~y 276 (346)
.++|+++++. + |+.+..
T Consensus 127 ~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp CSSSEEEEEETTTCCEEES
T ss_pred CCCCEEEEEeCCCCEEEec
Confidence 9999999997 3 765543
No 276
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.89 E-value=6.7e-09 Score=82.35 Aligned_cols=70 Identities=17% Similarity=0.249 Sum_probs=57.6
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc-CceEEEEE--cC-------------------------hhhhhhCCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI--QD-------------------------PQLAKRYSI 259 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i--~~-------------------------~~~~~~~~i 259 (346)
.+++++|.||++||++|+.+.|.+.++++++.+ .++.++.+ +. ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 457999999999999999999999999999873 36777776 21 468899999
Q ss_pred ccccEEEEEe--CCeEEEee
Q psy160 260 KTFPALVYFR--NGNPLIFE 277 (346)
Q Consensus 260 ~~~Pti~~~~--~g~~~~y~ 277 (346)
.++|+++++. +|+.+...
T Consensus 107 ~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 107 KSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp CSSSEEEEEETTTCCEEESC
T ss_pred CCCCEEEEEECCCCcEEecc
Confidence 9999999996 78765433
No 277
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.89 E-value=7e-09 Score=82.88 Aligned_cols=86 Identities=20% Similarity=0.331 Sum_probs=65.0
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cCh----------------------hhhhhCCCccc
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDP----------------------QLAKRYSIKTF 262 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~----------------------~~~~~~~i~~~ 262 (346)
.+++++|.||++||++|+.+.+.+.++++++.+.++.++.+ .+. .+++.|++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 45799999999999999999999999999998645777777 222 67788999999
Q ss_pred cEEEEE-eCCeEE-EeecCccccccchhhhhhhc
Q psy160 263 PALVYF-RNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 263 Pti~~~-~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
|+++++ ++|+.+ .+.|....+... +..+++.
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~-l~~~i~~ 139 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEA-LEQQILA 139 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHH-HHHHHHH
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHH-HHHHHHH
Confidence 999888 678754 466755432222 5555544
No 278
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.89 E-value=2e-08 Score=77.58 Aligned_cols=103 Identities=9% Similarity=0.097 Sum_probs=83.8
Q ss_pred hccCCccccCceeec-CHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCChhhHHhhCCCC
Q psy160 78 TSQDVFEIKNEIEEV-NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMADPRYARKWGVTK 156 (346)
Q Consensus 78 ~~~~~p~~~~~v~~l-~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~~~l~~~~~i~~ 156 (346)
.++..| +..+..| +.+++++++..+++++|-|+++||+.| .+.|.++|+.+ .++.|+.++++++++++++.
T Consensus 14 ~kq~gP--~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~--~d~~F~~t~~~~v~~~~~v~- 85 (124)
T 2l4c_A 14 SDGPGA--AQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF--PGVSFGISTDSEVLTHYNIT- 85 (124)
T ss_dssp CCCSCC--SCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC--TTSEEEEECCHHHHHHTTCC-
T ss_pred HhccCC--CCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC--CCceEEEEChHHHHHHcCCC-
Confidence 345565 3344556 578899999988999999999999998 67899999998 34999999999999999998
Q ss_pred cceEEEEecCC--cceecC----CcchhHHHHHHHhhcc
Q psy160 157 LPAVVYFRHRF--PSIYRG----DLSEEEEVLQWLITQK 189 (346)
Q Consensus 157 ~Ptl~~~~~g~--~~~y~g----~~~~~~~i~~fi~~~~ 189 (346)
.|++++|++.. ...|.| ..+ .++|.+||..+.
T Consensus 86 ~~~vvlfkkfde~~~~~~g~~~~~~~-~~~L~~FI~~n~ 123 (124)
T 2l4c_A 86 GNTICLFRLVDNEQLNLEDEDIESID-ATKLSRFIEINS 123 (124)
T ss_dssp SSCEEEEETTTTEEEEECHHHHTTCC-HHHHHHHHHHHC
T ss_pred CCeEEEEEcCCCCceeecCcccCCCC-HHHHHHHHHHhc
Confidence 89999999854 567887 565 458999998753
No 279
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.88 E-value=7.5e-09 Score=82.90 Aligned_cols=88 Identities=16% Similarity=0.308 Sum_probs=65.9
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--C------------------------hhhHHhhCCCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--D------------------------PRYARKWGVTK 156 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--~------------------------~~l~~~~~i~~ 156 (346)
.+++++|.||++||++|+...|.+.++++.+.+.++.++.++ . ..+++.|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 457899999999999999999999999999966556666543 2 23889999999
Q ss_pred cceEEEE-ecCC-cceecCCcc-hhHHHHHHHhhccc
Q psy160 157 LPAVVYF-RHRF-PSIYRGDLS-EEEEVLQWLITQKT 190 (346)
Q Consensus 157 ~Ptl~~~-~~g~-~~~y~g~~~-~~~~i~~fi~~~~~ 190 (346)
+|+++++ ++|+ ...+.|... ..+++.+++.+...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 9977777 4676 344667641 23478888877543
No 280
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.88 E-value=3.1e-09 Score=84.35 Aligned_cols=67 Identities=24% Similarity=0.423 Sum_probs=57.3
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhc-CcCceEEEEE---c-------------------------ChhhhhhCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDEC-DIYGIHMVKI---Q-------------------------DPQLAKRYS 258 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~-~~~~i~~~~i---~-------------------------~~~~~~~~~ 258 (346)
.+++++|.||++||++|+.+.|.+.++++++ .+.++.++.+ . +..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4579999999999999999999999999999 6545888877 2 347899999
Q ss_pred CccccEEEEE-eCCeEE
Q psy160 259 IKTFPALVYF-RNGNPL 274 (346)
Q Consensus 259 i~~~Pti~~~-~~g~~~ 274 (346)
+.++|+++++ ++|+.+
T Consensus 112 v~~~P~~~lid~~G~i~ 128 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKIL 128 (148)
T ss_dssp CCSSSEEEEECTTSBEE
T ss_pred CCCcCEEEEECCCCeEE
Confidence 9999999999 677644
No 281
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.88 E-value=9.5e-09 Score=82.28 Aligned_cols=66 Identities=12% Similarity=0.099 Sum_probs=54.8
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe--CC--------------------------hhhHHhhCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--AD--------------------------PRYARKWGV 154 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~~--------------------------~~l~~~~~i 154 (346)
.+++++|.||++||++|+...|.+.++++.+.+.++.++.+ +. ..+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 45789999999999999999999999999986655666554 32 578899999
Q ss_pred CCcceEEEE-ecCCc
Q psy160 155 TKLPAVVYF-RHRFP 168 (346)
Q Consensus 155 ~~~Ptl~~~-~~g~~ 168 (346)
.++|+++++ ++|+.
T Consensus 108 ~~~P~~~lid~~G~i 122 (152)
T 2lrn_A 108 VGFPHIILVDPEGKI 122 (152)
T ss_dssp CSSCEEEEECTTSEE
T ss_pred CcCCeEEEECCCCeE
Confidence 999999999 46763
No 282
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.88 E-value=6.8e-09 Score=84.11 Aligned_cols=74 Identities=20% Similarity=0.354 Sum_probs=59.8
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChhhhhhC---------------------------
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQLAKRY--------------------------- 257 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~~~~~~--------------------------- 257 (346)
.+++++|.||++||++|+.+.|.+.++++++.+.++.++.+ ...+..+.|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 45799999999999999999999999999998655888887 335555555
Q ss_pred CCccccEEEEE-eCCeEE-EeecCcc
Q psy160 258 SIKTFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 258 ~i~~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
++.++|+++++ ++|+.+ .+.|..+
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~ 138 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRS 138 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCC
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCC
Confidence 89999999988 678754 4667664
No 283
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.88 E-value=8.5e-09 Score=81.98 Aligned_cols=69 Identities=16% Similarity=0.290 Sum_probs=57.1
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc-CceEEEEE--cC-------------------------hhhhhhCCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI--QD-------------------------PQLAKRYSI 259 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i--~~-------------------------~~~~~~~~i 259 (346)
.+++++|.||++||++|+.+.|.+.++++++.+ .++.++.+ +. ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 357999999999999999999999999999872 36777776 21 368899999
Q ss_pred ccccEEEEEe--CCeEEEe
Q psy160 260 KTFPALVYFR--NGNPLIF 276 (346)
Q Consensus 260 ~~~Pti~~~~--~g~~~~y 276 (346)
.++|+++++. +|+.+..
T Consensus 107 ~~~Pt~~lid~~~G~i~~~ 125 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVVTT 125 (146)
T ss_dssp CSSSEEEEEETTTCCEEES
T ss_pred CCCCEEEEEECCCCeEEEe
Confidence 9999999997 7876543
No 284
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.87 E-value=3.8e-09 Score=83.60 Aligned_cols=81 Identities=14% Similarity=0.323 Sum_probs=60.1
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHH---HHhhccCCCcEEEEeC--Ch-------------------------hhHHhhC
Q psy160 104 NEFVTVFFYETDHKDSVKVLERLEK---IDGETDNMDITFVKMA--DP-------------------------RYARKWG 153 (346)
Q Consensus 104 ~~~~lv~F~~~~C~~c~~~~~~~~~---~a~~~~~~~i~~~~~~--~~-------------------------~l~~~~~ 153 (346)
+++++|.||++||++|+...|.+.+ +++.++..++.++.++ .. .+++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5789999999999999999999999 8988865566666543 11 1578999
Q ss_pred CCCcceEEEEecCCcceecCCcchhHHHHHHHh
Q psy160 154 VTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLI 186 (346)
Q Consensus 154 i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~ 186 (346)
|.++|+++++.....+.+.+. . .+++.+|++
T Consensus 111 v~~~P~~~lid~~G~i~~~~~-~-~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAIPTLYLLDKNKTVLLKDA-T-LQKVEQYLA 141 (142)
T ss_dssp CTTCSEEEEECTTCBEEEEEE-C-HHHHHHHHH
T ss_pred CCcCCeEEEECCCCcEEecCC-C-HHHHHHHHh
Confidence 999999999964333333332 2 337777775
No 285
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.87 E-value=8.7e-09 Score=80.31 Aligned_cols=73 Identities=15% Similarity=0.403 Sum_probs=59.6
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-------------------------------cChhhhhh
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-------------------------------QDPQLAKR 256 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-------------------------------~~~~~~~~ 256 (346)
.+++++|.||++||++|+.+.+.+.++++++.. ++.++.+ .+..+++.
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 457999999999999999999999999998664 6666665 13468899
Q ss_pred CCCccccEEEEE-eCCeEE-EeecCcc
Q psy160 257 YSIKTFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 257 ~~i~~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
|++.++|+++++ ++|+.+ .+.|..+
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~~g~~~ 126 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTHPGFME 126 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEEESCCC
T ss_pred cCcccCCeEEEECCCCcEEEeecCCCc
Confidence 999999999999 678753 5677655
No 286
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.87 E-value=7.9e-09 Score=82.89 Aligned_cols=82 Identities=15% Similarity=0.227 Sum_probs=61.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--------------------------ChhhHHhhCCCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------DPRYARKWGVTK 156 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--------------------------~~~l~~~~~i~~ 156 (346)
.+++++|.||++||++|+.+.|.+.++++. .+ +.++.++ ...++++|+|.+
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~--v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 117 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD-KR--FQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG 117 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-TT--SEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-CC--eEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc
Confidence 367899999999999999999999999876 22 4444322 347889999999
Q ss_pred cceEEEE-ecCC-cceecCCcchhHHHHHHHhhc
Q psy160 157 LPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 157 ~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+|+++++ ++|+ ...+.|..+.+ .+.+++.+.
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~-~l~~~l~~~ 150 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPD-NLRSVLLPQ 150 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHH-HHHHTHHHH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHH-HHHHHHHHH
Confidence 9977666 5677 34578877644 777776653
No 287
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.87 E-value=8.2e-09 Score=83.10 Aligned_cols=73 Identities=12% Similarity=0.244 Sum_probs=59.3
Q ss_pred cceEEEEEEcCCChhhHHH-HHHHHHHHhhcCcCceEEEEEcC-------------------------------h-----
Q psy160 209 TQYLAVYFYKLNCNICDQI-LEGLEKVDDECDIYGIHMVKIQD-------------------------------P----- 251 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~-~~~~~~la~~~~~~~i~~~~i~~-------------------------------~----- 251 (346)
.++++|.||++||++|+.. .|.+.++.+++++.++.++.+.- .
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 5799999999999999995 99999999999855677776621 1
Q ss_pred hhhhhCCCccccEEEEE-eCCeEE-EeecCcc
Q psy160 252 QLAKRYSIKTFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 252 ~~~~~~~i~~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
.+++.|++.++|+++++ ++|+.+ .+.|..+
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 139 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVS 139 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCC
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCC
Confidence 48899999999999998 578743 4667665
No 288
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.86 E-value=6.5e-09 Score=83.15 Aligned_cols=74 Identities=14% Similarity=0.358 Sum_probs=60.5
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--------------------------cChhhhhhCCCcc
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--------------------------QDPQLAKRYSIKT 261 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--------------------------~~~~~~~~~~i~~ 261 (346)
.+++++|.||++||++|+.+.+.+.++++++.+.++.++.+ .+..+++.|+|.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 46799999999999999999999999999987645666643 2557899999999
Q ss_pred ccEEEEE-eCCeE-EEeecCcc
Q psy160 262 FPALVYF-RNGNP-LIFEGENK 281 (346)
Q Consensus 262 ~Pti~~~-~~g~~-~~y~g~~~ 281 (346)
+|+++++ ++|+. ..|.|..+
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~ 128 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPD 128 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCC
T ss_pred cCeEEEECCCCcEEEEEcCCCC
Confidence 9999999 67774 35777654
No 289
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.86 E-value=6.1e-09 Score=82.46 Aligned_cols=71 Identities=17% Similarity=0.335 Sum_probs=57.9
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCc-CceEEEEE--c-------------------------ChhhhhhCCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDI-YGIHMVKI--Q-------------------------DPQLAKRYSI 259 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~-~~i~~~~i--~-------------------------~~~~~~~~~i 259 (346)
.+++++|.||++||++|+.+.|.+.++++++++ .++.++.+ + +..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 457999999999999999999999999999872 36777766 2 1357889999
Q ss_pred ccccEEEEEe--CCeEEEeec
Q psy160 260 KTFPALVYFR--NGNPLIFEG 278 (346)
Q Consensus 260 ~~~Pti~~~~--~g~~~~y~g 278 (346)
.++|+++++. +|+.+...+
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 107 ESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp CSSSEEEEEETTTCCEEESCH
T ss_pred CCCCEEEEEECCCCeEEecch
Confidence 9999999998 787655443
No 290
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.86 E-value=5.6e-09 Score=83.05 Aligned_cols=67 Identities=9% Similarity=0.161 Sum_probs=54.2
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccC-CCcEEE--EeCC-------------------------hhhHHhhCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFV--KMAD-------------------------PRYARKWGV 154 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~-~~i~~~--~~~~-------------------------~~l~~~~~i 154 (346)
.+++++|.||++||++|+.+.|.+.++++++.. .++.++ .+|. ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 457899999999999999999999999999862 345544 4442 368899999
Q ss_pred CCcceEEEEe--cCCcc
Q psy160 155 TKLPAVVYFR--HRFPS 169 (346)
Q Consensus 155 ~~~Ptl~~~~--~g~~~ 169 (346)
.++||++++. +|+..
T Consensus 107 ~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVV 123 (146)
T ss_dssp CSSSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCeEE
Confidence 9999999997 56643
No 291
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.86 E-value=1.2e-08 Score=81.73 Aligned_cols=68 Identities=19% Similarity=0.370 Sum_probs=57.8
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c--------------------------ChhhhhhCCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q--------------------------DPQLAKRYSI 259 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~--------------------------~~~~~~~~~i 259 (346)
.+++++|.||++||++|+.+.|.+.++.+++.+.++.++.+ + +..+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 45799999999999999999999999999998645888877 2 3678899999
Q ss_pred ccccEEEEE-eCCeEEE
Q psy160 260 KTFPALVYF-RNGNPLI 275 (346)
Q Consensus 260 ~~~Pti~~~-~~g~~~~ 275 (346)
.++|+++++ ++|+.+.
T Consensus 108 ~~~P~~~lid~~G~i~~ 124 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVA 124 (152)
T ss_dssp CSSCEEEEECTTSEEEE
T ss_pred CcCCeEEEECCCCeEEE
Confidence 999999999 6787543
No 292
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.85 E-value=1.1e-08 Score=82.14 Aligned_cols=76 Identities=14% Similarity=0.144 Sum_probs=59.8
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-Ch-----------------------hhHHhhCCCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-DP-----------------------RYARKWGVTK 156 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-~~-----------------------~l~~~~~i~~ 156 (346)
.+++++|.||++||++|+...|.+.++++++.+.++.++.+ | .. .+++.|+|.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 45789999999999999999999999999986545666554 3 22 2889999999
Q ss_pred cceEEEEe-cCC-cceecCCcchh
Q psy160 157 LPAVVYFR-HRF-PSIYRGDLSEE 178 (346)
Q Consensus 157 ~Ptl~~~~-~g~-~~~y~g~~~~~ 178 (346)
+|+++++. +|+ ...+.|....+
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e 137 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLD 137 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHH
T ss_pred CceEEEECCCCeEEEecCCHHHHH
Confidence 99999995 676 34467766544
No 293
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.85 E-value=6.8e-09 Score=81.97 Aligned_cols=83 Identities=17% Similarity=0.365 Sum_probs=60.7
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHH---HHhhccCCCcEEEEe--C-Chh----------------------h--HHhh
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEK---IDGETDNMDITFVKM--A-DPR----------------------Y--ARKW 152 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~---~a~~~~~~~i~~~~~--~-~~~----------------------l--~~~~ 152 (346)
.+++++|.||++||++|+...|.+.+ +++.+...++.++.+ | ... + ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 46889999999999999999999988 888875545666654 3 222 2 3489
Q ss_pred CCCCcceEEEEe-cCCcceecCCcchhHHHHHHHhhc
Q psy160 153 GVTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 153 ~i~~~Ptl~~~~-~g~~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+|.++|+++++. +|+ +.+ +..+ .+++.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~-i~~-~~~~-~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKR-VIL-KDTS-MEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCB-EEE-CSCC-HHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCC-EEe-cCCC-HHHHHHHHHHH
Confidence 999999999995 454 334 4445 44788888764
No 294
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.85 E-value=6.4e-09 Score=82.33 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=54.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhcc-CCCcEEEE--eCC-------------------------hhhHHhhCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETD-NMDITFVK--MAD-------------------------PRYARKWGV 154 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~-~~~i~~~~--~~~-------------------------~~l~~~~~i 154 (346)
.+++++|.|+++||++|+.+.|.+.++++++. ..++.++. +|. ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 45789999999999999999999999999886 23455544 442 358899999
Q ss_pred CCcceEEEEe--cCCcce
Q psy160 155 TKLPAVVYFR--HRFPSI 170 (346)
Q Consensus 155 ~~~Ptl~~~~--~g~~~~ 170 (346)
.++||++++. +|+...
T Consensus 107 ~~~Pt~~lid~~~G~i~~ 124 (144)
T 1o73_A 107 ESIPTLITINADTGAIIG 124 (144)
T ss_dssp CSSSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCeEEe
Confidence 9999999998 566443
No 295
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.85 E-value=6.4e-09 Score=82.45 Aligned_cols=67 Identities=10% Similarity=0.067 Sum_probs=54.4
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccC-CCcEEEE--eCC-------------------------hhhHHhhCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFVK--MAD-------------------------PRYARKWGV 154 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~-~~i~~~~--~~~-------------------------~~l~~~~~i 154 (346)
.+++++|.||++||++|+.+.|.+.++++.+.. .++.++. +|. ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 457899999999999999999999999999863 3455554 442 468899999
Q ss_pred CCcceEEEEe--cCCcc
Q psy160 155 TKLPAVVYFR--HRFPS 169 (346)
Q Consensus 155 ~~~Ptl~~~~--~g~~~ 169 (346)
.++|+++++. +|+..
T Consensus 107 ~~~P~~~lid~~~G~i~ 123 (144)
T 1i5g_A 107 KSIPTLVGVEADSGNII 123 (144)
T ss_dssp CSSSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCcEE
Confidence 9999999996 56643
No 296
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.84 E-value=5.8e-09 Score=79.57 Aligned_cols=84 Identities=20% Similarity=0.177 Sum_probs=58.3
Q ss_pred HHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---C-----hhhHHhhCCCCcceEEEEecC
Q psy160 95 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---D-----PRYARKWGVTKLPAVVYFRHR 166 (346)
Q Consensus 95 ~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~-----~~l~~~~~i~~~Ptl~~~~~g 166 (346)
+.+++++.. +.+++ ||++||++|+.+.|.+.+++.. +.++.++ . ..+++++++.++||+ |.+|
T Consensus 11 ~~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g 81 (116)
T 2e7p_A 11 KKAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGG 81 (116)
T ss_dssp HHHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETT
T ss_pred HHHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECC
Confidence 445555544 45555 9999999999999999998654 4667765 2 358999999999999 4577
Q ss_pred Ccc-eecCCc---chhHHHHHHHhhc
Q psy160 167 FPS-IYRGDL---SEEEEVLQWLITQ 188 (346)
Q Consensus 167 ~~~-~y~g~~---~~~~~i~~fi~~~ 188 (346)
+.+ .+.|.. . .+.|.+++.+.
T Consensus 82 ~~v~~~~~~~~~~~-~~~l~~~l~~~ 106 (116)
T 2e7p_A 82 KQIGGCDTVVEKHQ-RNELLPLLQDA 106 (116)
T ss_dssp EEEECHHHHHHHHH-TTCHHHHHHHT
T ss_pred EEECChHHHHHHHh-CChHHHHHHHc
Confidence 632 344432 3 22577777653
No 297
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.84 E-value=1.3e-08 Score=82.01 Aligned_cols=74 Identities=14% Similarity=0.295 Sum_probs=59.6
Q ss_pred ccceEEEEEEcCCChhhHH-HHHHHHHHHhhcCcCceEEEEEc-------------------------------Chh---
Q psy160 208 ETQYLAVYFYKLNCNICDQ-ILEGLEKVDDECDIYGIHMVKIQ-------------------------------DPQ--- 252 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~-~~~~~~~la~~~~~~~i~~~~i~-------------------------------~~~--- 252 (346)
.+++++|.||++||++|.. +.|.+.++.+++.+.++.++.+. ...
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 3679999999999999999 69999999999986557777662 122
Q ss_pred ---hhhhCCCccccEEEEEe-CCeEE-EeecCcc
Q psy160 253 ---LAKRYSIKTFPALVYFR-NGNPL-IFEGENK 281 (346)
Q Consensus 253 ---~~~~~~i~~~Pti~~~~-~g~~~-~y~g~~~ 281 (346)
+++.|+|.++|+++++. +|+.+ .+.|..+
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 142 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVD 142 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCC
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCC
Confidence 88999999999999995 77743 4567765
No 298
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.84 E-value=7e-09 Score=82.88 Aligned_cols=74 Identities=16% Similarity=0.385 Sum_probs=60.0
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cCh-----------------------hhhhhCCCcc
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDP-----------------------QLAKRYSIKT 261 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~-----------------------~~~~~~~i~~ 261 (346)
.+++++|.||++||++|+.+.+.+.++.+++.+.++.++.+ .+. .+++.|++.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 35789999999999999999999999999987656888877 222 6889999999
Q ss_pred ccEEEEEe-CCeEEE-eecCcc
Q psy160 262 FPALVYFR-NGNPLI-FEGENK 281 (346)
Q Consensus 262 ~Pti~~~~-~g~~~~-y~g~~~ 281 (346)
+|+++++. +|+.+. +.|..+
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~ 130 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPS 130 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTT
T ss_pred CCEEEEECCCCeEEEccCCCCC
Confidence 99999997 787544 445443
No 299
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.83 E-value=9.3e-09 Score=83.80 Aligned_cols=66 Identities=9% Similarity=0.165 Sum_probs=54.3
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccC-CCcEEEE--eC-C------------------------hhhHHhhCC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN-MDITFVK--MA-D------------------------PRYARKWGV 154 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~-~~i~~~~--~~-~------------------------~~l~~~~~i 154 (346)
.+++++|.||++||++|+.+.|.+.++++++.. .++.++. +| . ..+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 468899999999999999999999999999854 3455554 33 2 578999999
Q ss_pred CCcceEEEEec--CCc
Q psy160 155 TKLPAVVYFRH--RFP 168 (346)
Q Consensus 155 ~~~Ptl~~~~~--g~~ 168 (346)
.++|+++++.. |+.
T Consensus 127 ~~~Pt~~lid~~~G~i 142 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDT 142 (165)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEeCCCCEE
Confidence 99999999983 553
No 300
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.82 E-value=1.7e-08 Score=77.91 Aligned_cols=100 Identities=13% Similarity=0.135 Sum_probs=79.5
Q ss_pred hccccCcE-EEc-cHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEcChhhhhhCCCccccE
Q psy160 187 TQKTEDRI-ELI-TRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQDPQLAKRYSIKTFPA 264 (346)
Q Consensus 187 ~~~~~~~v-~~l-~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~~~~~~~~~i~~~Pt 264 (346)
++..|+.. ..+ +.++++++++++++++|.|+++||++| .+.|.++|+.+ . ++.|+.+.+++++++++++ .|+
T Consensus 15 kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~~~~v~~~~~v~-~~~ 88 (124)
T 2l4c_A 15 DGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGISTDSEVLTHYNIT-GNT 88 (124)
T ss_dssp CCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEECCHHHHHHTTCC-SSC
T ss_pred hccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEChHHHHHHcCCC-CCe
Confidence 44455432 234 678899999989999999999999988 68999999998 4 7999999999999999998 799
Q ss_pred EEEEeCC--eEEEeec----Cccccccchhhhhhhcc
Q psy160 265 LVYFRNG--NPLIFEG----ENKILKGTYIGTYISTK 295 (346)
Q Consensus 265 i~~~~~g--~~~~y~g----~~~~~~~~~~~~~i~~~ 295 (346)
+++|+++ +...|.| ..+.+. |..|++.+
T Consensus 89 vvlfkkfde~~~~~~g~~~~~~~~~~---L~~FI~~n 122 (124)
T 2l4c_A 89 ICLFRLVDNEQLNLEDEDIESIDATK---LSRFIEIN 122 (124)
T ss_dssp EEEEETTTTEEEEECHHHHTTCCHHH---HHHHHHHH
T ss_pred EEEEEcCCCCceeecCcccCCCCHHH---HHHHHHHh
Confidence 9999975 4678887 444222 77777754
No 301
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.81 E-value=9.7e-09 Score=81.08 Aligned_cols=67 Identities=15% Similarity=0.406 Sum_probs=53.1
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHH---HHhhcCcCceEEEEE---cChhh------------------------hhhC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEK---VDDECDIYGIHMVKI---QDPQL------------------------AKRY 257 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~---la~~~~~~~i~~~~i---~~~~~------------------------~~~~ 257 (346)
.+++++|.||++||++|+.+.|.+.+ +.+.+++.++.++.+ .+.+. ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 35799999999999999999999998 888886546888777 22222 3489
Q ss_pred CCccccEEEEE-eCCeEE
Q psy160 258 SIKTFPALVYF-RNGNPL 274 (346)
Q Consensus 258 ~i~~~Pti~~~-~~g~~~ 274 (346)
+|.++|+++++ ++|+.+
T Consensus 106 ~v~~~P~~~lid~~G~i~ 123 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRVI 123 (142)
T ss_dssp CCCSSSEEEEECTTCBEE
T ss_pred CCCCCCeEEEECCCCCEE
Confidence 99999999999 467653
No 302
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.81 E-value=2.4e-08 Score=79.91 Aligned_cols=86 Identities=15% Similarity=0.285 Sum_probs=64.0
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--cC------------------------hhhhhhCCCcc
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--QD------------------------PQLAKRYSIKT 261 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~~------------------------~~~~~~~~i~~ 261 (346)
.+++++|.||++||++|+.+.+.+.++.+++.+.++.++.+ +. ..+++.|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 45799999999999999999999999999998656888777 21 23788999999
Q ss_pred ccEEEEE-eCCeEE-EeecCccccccchhhhhhhc
Q psy160 262 FPALVYF-RNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 262 ~Pti~~~-~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
+|+++++ ++|+.+ .+.|....+... +..+++.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~~-l~~~l~~ 140 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHPE-VIAFLNN 140 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSHH-HHHHHHT
T ss_pred CCeEEEECCCCcEEEEEcCCCccccHH-HHHHHHH
Confidence 9977776 678754 466765322222 4444444
No 303
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.80 E-value=1.2e-08 Score=81.66 Aligned_cols=81 Identities=17% Similarity=0.327 Sum_probs=61.3
Q ss_pred ceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE----------------------------cChhhhhhCCCcc
Q psy160 210 QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI----------------------------QDPQLAKRYSIKT 261 (346)
Q Consensus 210 ~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i----------------------------~~~~~~~~~~i~~ 261 (346)
++++|.||++||++|+.+.|.+.++++++ +..+..+.+ ....+++.|++.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG 109 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc
Confidence 78999999999999999999999999998 434444444 3366789999999
Q ss_pred ccEEEEE-eCCeEE-EeecCccccccchhhhhhhc
Q psy160 262 FPALVYF-RNGNPL-IFEGENKILKGTYIGTYIST 294 (346)
Q Consensus 262 ~Pti~~~-~~g~~~-~y~g~~~~~~~~~~~~~i~~ 294 (346)
+|+++++ ++|+.+ .+.|..+.++ +..+++.
T Consensus 110 ~P~~~lid~~G~i~~~~~g~~~~~~---l~~~l~~ 141 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGRAGREA---LLDALLL 141 (154)
T ss_dssp SCEEEEECTTSEEEEEEESBCCHHH---HHHHHHH
T ss_pred ccEEEEECCCCCEEEEEcCCCCHHH---HHHHHHh
Confidence 9998888 688754 4667655322 4444443
No 304
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.79 E-value=6.3e-09 Score=73.90 Aligned_cols=65 Identities=17% Similarity=0.157 Sum_probs=50.4
Q ss_pred EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC----ChhhHHhhCCCCcceEEEEecCCcceecCCcc
Q psy160 108 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLS 176 (346)
Q Consensus 108 lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~----~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~ 176 (346)
+++|+++||++|+.+.|.++++++.+. ..+.+++++ ...+++++|+.++||+++ +|+.. +.|...
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~-~~G~~~ 72 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK-YTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF-HINFGA 72 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT-EEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE-EEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC-CeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE-EeccCc
Confidence 688999999999999999999887642 236677775 467889999999999987 66532 355443
No 305
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.78 E-value=1.8e-08 Score=81.75 Aligned_cols=70 Identities=16% Similarity=0.411 Sum_probs=58.6
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-------------------C----------------
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-------------------D---------------- 250 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-------------------~---------------- 250 (346)
..++++|.||++||++|+.+.|.+.++.+++. ++.++.+ + .
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 45799999999999999999999999999987 6777777 3 1
Q ss_pred ------hhhhhhCCCccccEEEEE-eCCeEEEeecCc
Q psy160 251 ------PQLAKRYSIKTFPALVYF-RNGNPLIFEGEN 280 (346)
Q Consensus 251 ------~~~~~~~~i~~~Pti~~~-~~g~~~~y~g~~ 280 (346)
..+++.|+|.++|+++++ ++|+.+. .|..
T Consensus 114 ~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~ 149 (165)
T 3ha9_A 114 IMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTT 149 (165)
T ss_dssp EEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEES
T ss_pred eEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCC
Confidence 278899999999999999 5777655 6655
No 306
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.78 E-value=2.2e-08 Score=82.85 Aligned_cols=85 Identities=14% Similarity=0.238 Sum_probs=63.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCc------EEEEe--CC--hhhHHhh--------------------
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDI------TFVKM--AD--PRYARKW-------------------- 152 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i------~~~~~--~~--~~l~~~~-------------------- 152 (346)
.+++++|.||++||++|+...|.+.++++.+...++ .++.+ +. ...+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 457899999999999999999999999999855445 66654 33 5555555
Q ss_pred -----CCCCcceEEEE-ecCC-cceecCCcchhHHHHHHHhhc
Q psy160 153 -----GVTKLPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 153 -----~i~~~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
++.++|+++++ ++|+ ...+.|..+ .++|.+++.+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~-~~~l~~~l~~l 179 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVT-SKDVLDVALPL 179 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCC-HHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCC-HHHHHHHHHHH
Confidence 68999977666 4677 345788776 44788887654
No 307
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.78 E-value=1.6e-08 Score=92.41 Aligned_cols=85 Identities=7% Similarity=0.017 Sum_probs=67.4
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC------------------------------ChhhHHhh
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA------------------------------DPRYARKW 152 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~------------------------------~~~l~~~~ 152 (346)
.+++++|.||++||++|+.+.|.+.++++++...++.++.++ ...+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 357899999999999999999999999999865456666552 25789999
Q ss_pred CCCCcceEEEE-ecCC-cceecCCcchhHHHHHHHhhc
Q psy160 153 GVTKLPAVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 153 ~i~~~Ptl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+|.++|+++++ ++|+ ...+.|..+.+ ++.+++.+.
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~~~~-~l~~~I~~l 197 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEGDYN-VTETLVRQL 197 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBCCHH-HHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCCCHH-HHHHHHHHH
Confidence 99999999998 5676 44577877644 777777653
No 308
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.78 E-value=1.8e-08 Score=79.70 Aligned_cols=65 Identities=17% Similarity=0.480 Sum_probs=53.4
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHH---HHhhcCcCceEEEEE---cChh------------------------hhhhCC
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEK---VDDECDIYGIHMVKI---QDPQ------------------------LAKRYS 258 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~---la~~~~~~~i~~~~i---~~~~------------------------~~~~~~ 258 (346)
.++++|.||++||++|+.+.|.+.+ +.+++++.++.++.+ ...+ +++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 4799999999999999999999999 999886557888877 2211 477899
Q ss_pred CccccEEEEEe-CCeE
Q psy160 259 IKTFPALVYFR-NGNP 273 (346)
Q Consensus 259 i~~~Pti~~~~-~g~~ 273 (346)
|.++|+++++. +|+.
T Consensus 111 v~~~P~~~lid~~G~i 126 (142)
T 3eur_A 111 LRAIPTLYLLDKNKTV 126 (142)
T ss_dssp CTTCSEEEEECTTCBE
T ss_pred CCcCCeEEEECCCCcE
Confidence 99999999995 5654
No 309
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.76 E-value=2.9e-08 Score=79.62 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=59.3
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChh-----------------------hhhhCCCcc
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQ-----------------------LAKRYSIKT 261 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~-----------------------~~~~~~i~~ 261 (346)
.+++++|.||++||++|....|.+.++.+++.+.++.++.+ ...+ +++.|++.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 35799999999999999999999999999997645888877 2222 788999999
Q ss_pred ccEEEEE-eCCeEEE-eecCcc
Q psy160 262 FPALVYF-RNGNPLI-FEGENK 281 (346)
Q Consensus 262 ~Pti~~~-~~g~~~~-y~g~~~ 281 (346)
+|+++++ ++|+.+. +.|..+
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~ 135 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKD 135 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSC
T ss_pred CceEEEECCCCeEEEecCCHHH
Confidence 9999999 5787543 455543
No 310
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.76 E-value=9.9e-09 Score=81.39 Aligned_cols=72 Identities=19% Similarity=0.301 Sum_probs=59.3
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cChh-------------------------hhhhCCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QDPQ-------------------------LAKRYSI 259 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~~~-------------------------~~~~~~i 259 (346)
.+++++|.||++||++|+.+.|.+.++.+++.+.++.++.+ .+.+ +++.|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 45799999999999999999999999999998645888887 2444 8999999
Q ss_pred ccccEEEEE-eCCeEE-EeecC
Q psy160 260 KTFPALVYF-RNGNPL-IFEGE 279 (346)
Q Consensus 260 ~~~Pti~~~-~~g~~~-~y~g~ 279 (346)
.++|+++++ ++|+.+ .+.|.
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~ 131 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGY 131 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCG
T ss_pred CCCCEEEEECCCCcEEEecCCH
Confidence 999999999 677753 34444
No 311
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.76 E-value=3.5e-08 Score=81.21 Aligned_cols=83 Identities=12% Similarity=0.049 Sum_probs=61.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe-----------------------C-ChhhHHhhCCCCcc
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM-----------------------A-DPRYARKWGVTKLP 158 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~-----------------------~-~~~l~~~~~i~~~P 158 (346)
.+++++|.||++||++|+...|.+.+++++ +..+..+.+ | ...+++.|+|.++|
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 134 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAP 134 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCC
Confidence 468899999999999999999999999876 322222232 1 45788999999999
Q ss_pred eEEEEe-cCC-cceecCCcchhHHHHHHHhhc
Q psy160 159 AVVYFR-HRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 159 tl~~~~-~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+++++. +|+ ...+.|..+.+ .+.+++.+.
T Consensus 135 ~~~lid~~G~i~~~~~g~~~~~-~l~~~l~~~ 165 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVVDQK-VWREQLAPL 165 (176)
T ss_dssp EEEEECTTCBEEEEEESCCCHH-HHHHHTHHH
T ss_pred eEEEECCCCeEEEEEcCCCCHH-HHHHHHHHH
Confidence 888774 576 34577887644 677776654
No 312
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.74 E-value=1.5e-08 Score=71.86 Aligned_cols=64 Identities=20% Similarity=0.400 Sum_probs=50.8
Q ss_pred EEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc----ChhhhhhCCCccccEEEEEeCCeEEEeecCc
Q psy160 213 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ----DPQLAKRYSIKTFPALVYFRNGNPLIFEGEN 280 (346)
Q Consensus 213 lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~----~~~~~~~~~i~~~Pti~~~~~g~~~~y~g~~ 280 (346)
++.|+++||++|+.+.+.++++++++.. .+.+..++ +.++++++|++++|++++ +|+.+ +.|..
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~-~~G~~ 71 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF-HINFG 71 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE-EEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE-EeccC
Confidence 5779999999999999999999877653 56677773 567889999999999977 77743 45543
No 313
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.71 E-value=5.4e-08 Score=76.94 Aligned_cols=81 Identities=11% Similarity=0.079 Sum_probs=59.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-C--------------------------hhhHHhhC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-D--------------------------PRYARKWG 153 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-~--------------------------~~l~~~~~ 153 (346)
.+++++|.||++||++|+...|.+.++++++...++.++.+ | . ..+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 45789999999999999999999999999986556666644 2 1 35778999
Q ss_pred CCCcceEEEEe-cCCcceecCCcchhHHHHHHHh
Q psy160 154 VTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLI 186 (346)
Q Consensus 154 i~~~Ptl~~~~-~g~~~~y~g~~~~~~~i~~fi~ 186 (346)
|.++|+.+++. +|+. .+.+. . .+++.+.+.
T Consensus 111 v~~~P~~~lid~~G~i-~~~~~-~-~~~l~~~l~ 141 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVI-IAANV-T-PEKLTEILK 141 (143)
T ss_dssp GGGCCCEEEECTTSBE-EEESC-C-HHHHHHHHT
T ss_pred CCCCCcEEEECCCCEE-EEccC-C-HHHHHHHHH
Confidence 99999999887 4553 33322 2 235666554
No 314
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.69 E-value=5.9e-08 Score=76.74 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=55.3
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-C--------------------------hhhhhhCC
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-D--------------------------PQLAKRYS 258 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-~--------------------------~~~~~~~~ 258 (346)
.+++++|.||++||++|..+.|.+.++.+++++.++.++.+ + + ..+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 35799999999999999999999999999997656877776 1 1 24678899
Q ss_pred CccccEEEEEe-CCeEE
Q psy160 259 IKTFPALVYFR-NGNPL 274 (346)
Q Consensus 259 i~~~Pti~~~~-~g~~~ 274 (346)
|.++|+.+++. +|+.+
T Consensus 111 v~~~P~~~lid~~G~i~ 127 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVII 127 (143)
T ss_dssp GGGCCCEEEECTTSBEE
T ss_pred CCCCCcEEEECCCCEEE
Confidence 99999998886 67643
No 315
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=1.1e-07 Score=75.78 Aligned_cols=82 Identities=15% Similarity=0.202 Sum_probs=61.3
Q ss_pred cCCcEEEEEECCCChh--HHHHHHHHHHHHhhc-cCCCcEEEEe--C-C-------------------------hhhHHh
Q psy160 103 ENEFVTVFFYETDHKD--SVKVLERLEKIDGET-DNMDITFVKM--A-D-------------------------PRYARK 151 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~--c~~~~~~~~~~a~~~-~~~~i~~~~~--~-~-------------------------~~l~~~ 151 (346)
.+++++|.||++||++ |+...|.+.++++++ +..++.++.+ | . ..+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4578999999999999 999999999999998 6555666654 3 2 268899
Q ss_pred hCCCCcceEEEEe-cCCcceecCCcchhHHHHHHHhh
Q psy160 152 WGVTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 152 ~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~~i~~fi~~ 187 (346)
|+|.++|+++++. +|+... ... + .+++.+.+.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~~-~~~-~-~~~l~~~l~~ 145 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILA-KNL-R-GEELKKKIEN 145 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEE-ESC-C-HHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEE-ccC-C-HHHHHHHHHH
Confidence 9999999999994 566322 222 2 3356665544
No 316
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=7.4e-08 Score=76.80 Aligned_cols=67 Identities=25% Similarity=0.323 Sum_probs=56.7
Q ss_pred ccceEEEEEEcCCChh--hHHHHHHHHHHHhhc-CcCceEEEEE---cC-------------------------hhhhhh
Q psy160 208 ETQYLAVYFYKLNCNI--CDQILEGLEKVDDEC-DIYGIHMVKI---QD-------------------------PQLAKR 256 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~--c~~~~~~~~~la~~~-~~~~i~~~~i---~~-------------------------~~~~~~ 256 (346)
.+++++|.||++||++ |+...|.+.++.+++ ++.++.++.+ .. ..+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3579999999999999 999999999999999 6545888877 22 268899
Q ss_pred CCCccccEEEEE-eCCeEE
Q psy160 257 YSIKTFPALVYF-RNGNPL 274 (346)
Q Consensus 257 ~~i~~~Pti~~~-~~g~~~ 274 (346)
|++.++|+++++ ++|+.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~ 130 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKIL 130 (150)
T ss_dssp TTCCSSSEEEEECTTSBEE
T ss_pred cCCCccCeEEEECCCCEEE
Confidence 999999999999 677754
No 317
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.68 E-value=5.6e-08 Score=77.80 Aligned_cols=70 Identities=14% Similarity=0.233 Sum_probs=54.7
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--------------------------cChhhhhhCCCccc
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--------------------------QDPQLAKRYSIKTF 262 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--------------------------~~~~~~~~~~i~~~ 262 (346)
+++++|.||++||++|+.+.|.+.+++++ + ++.++.+ .+..+++.|++.++
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 67899999999999999999999999877 2 4555544 23467889999999
Q ss_pred cEEEEE-eCCeEE-EeecCcc
Q psy160 263 PALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 263 Pti~~~-~~g~~~-~y~g~~~ 281 (346)
|+++++ ++|+.+ .+.|..+
T Consensus 119 P~~~~id~~G~i~~~~~g~~~ 139 (156)
T 1kng_A 119 PETFVVGREGTIVYKLVGPIT 139 (156)
T ss_dssp CEEEEECTTSBEEEEEESCCC
T ss_pred CeEEEEcCCCCEEEEEeCCCC
Confidence 977666 688754 4667654
No 318
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.67 E-value=1e-07 Score=78.96 Aligned_cols=87 Identities=14% Similarity=0.229 Sum_probs=64.4
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe--CC------hhhHHhhCCC-------------------
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM--AD------PRYARKWGVT------------------- 155 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~~------~~l~~~~~i~------------------- 155 (346)
.+++++|.||++||++|+...|.+.++++++...++.++.+ |. ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 45789999999999999999999999999986445555544 32 3466677774
Q ss_pred ----CcceEEEE-ecCC-cceecCCcc-hhHHHHHHHhhcc
Q psy160 156 ----KLPAVVYF-RHRF-PSIYRGDLS-EEEEVLQWLITQK 189 (346)
Q Consensus 156 ----~~Ptl~~~-~~g~-~~~y~g~~~-~~~~i~~fi~~~~ 189 (346)
++|+++++ ++|+ ...+.|... ..+++.+++....
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAAT 179 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHh
Confidence 89999999 4676 345777654 1347888877654
No 319
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.12 E-value=2.4e-09 Score=84.63 Aligned_cols=71 Identities=20% Similarity=0.389 Sum_probs=55.5
Q ss_pred ceEEEEEEcCCChhhHHHHHHHHHHHhhcCc--CceEEEEE--c-C-------------------------hhhhhhCCC
Q psy160 210 QYLAVYFYKLNCNICDQILEGLEKVDDECDI--YGIHMVKI--Q-D-------------------------PQLAKRYSI 259 (346)
Q Consensus 210 ~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~--~~i~~~~i--~-~-------------------------~~~~~~~~i 259 (346)
++++|.||++||++|+.+.|.+.+++++++. .++.++.+ + . ..+++.|+|
T Consensus 27 ~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (143)
T 2lus_A 27 DIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGI 106 (143)
Confidence 3899999999999999999999999998831 24555555 1 2 368889999
Q ss_pred ccccEEEEEe-CCeEEEeecCc
Q psy160 260 KTFPALVYFR-NGNPLIFEGEN 280 (346)
Q Consensus 260 ~~~Pti~~~~-~g~~~~y~g~~ 280 (346)
.++|+++++. +|+.+...|..
T Consensus 107 ~~~P~~~lid~~G~i~~~~~~~ 128 (143)
T 2lus_A 107 TGIPALVIVKKDGTLISMNGRG 128 (143)
Confidence 9999999997 78765555443
No 320
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.66 E-value=8.4e-08 Score=80.09 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=63.1
Q ss_pred cCC-cEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--------------------------------ChhhH
Q psy160 103 ENE-FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------------DPRYA 149 (346)
Q Consensus 103 ~~~-~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--------------------------------~~~l~ 149 (346)
.++ +++|.|+++||++|+...|.+.++++++...++.++.++ ...++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 345 599999999999999999999999998854445555432 34689
Q ss_pred HhhCCCCcceEEEEe-cCCcc-e---------ecCCcchhHHHHHHHhhcc
Q psy160 150 RKWGVTKLPAVVYFR-HRFPS-I---------YRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 150 ~~~~i~~~Ptl~~~~-~g~~~-~---------y~g~~~~~~~i~~fi~~~~ 189 (346)
+.|+|.++|+++++. +|+.. . +.|..+.+ +|.+.+.+..
T Consensus 124 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~-~l~~~i~~ll 173 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGE-SIRAALDALL 173 (196)
T ss_dssp HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCH-HHHHHHHHHH
T ss_pred HHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHH-HHHHHHHHHH
Confidence 999999999999995 56532 2 23554533 6777776543
No 321
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.11 E-value=2.5e-09 Score=84.48 Aligned_cols=71 Identities=14% Similarity=0.212 Sum_probs=54.1
Q ss_pred CC-cEEEEEECCCChhHHHHHHHHHHHHhhcc--CCCcEEE--EeC-C-------------------------hhhHHhh
Q psy160 104 NE-FVTVFFYETDHKDSVKVLERLEKIDGETD--NMDITFV--KMA-D-------------------------PRYARKW 152 (346)
Q Consensus 104 ~~-~~lv~F~~~~C~~c~~~~~~~~~~a~~~~--~~~i~~~--~~~-~-------------------------~~l~~~~ 152 (346)
++ +++|.|+++||++|+.+.|.+.++++.++ ..++.++ .++ . ..++++|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 89999999999999999999999998882 1233333 333 1 3688999
Q ss_pred CCCCcceEEEEe-cCCcceecCC
Q psy160 153 GVTKLPAVVYFR-HRFPSIYRGD 174 (346)
Q Consensus 153 ~i~~~Ptl~~~~-~g~~~~y~g~ 174 (346)
+|.++|+++++. +|+.....|.
T Consensus 105 ~v~~~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 105 GITGIPALVIVKKDGTLISMNGR 127 (143)
Confidence 999999999997 6765444443
No 322
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.64 E-value=7.3e-08 Score=78.36 Aligned_cols=73 Identities=12% Similarity=0.152 Sum_probs=54.2
Q ss_pred hccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEE-----------------------E-cChhhhhhCCCccc
Q psy160 207 EETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVK-----------------------I-QDPQLAKRYSIKTF 262 (346)
Q Consensus 207 ~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~-----------------------i-~~~~~~~~~~i~~~ 262 (346)
..+++++|.||++||++|+.+.|.+.+++++ +..+..+. . .+..+++.|+|.++
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 126 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGA 126 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcccc
Confidence 3567999999999999999999999999876 22333333 1 34568889999999
Q ss_pred cEEEEE-eCCeEE-EeecCcc
Q psy160 263 PALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 263 Pti~~~-~~g~~~-~y~g~~~ 281 (346)
|+.+++ ++|+.+ .+.|..+
T Consensus 127 P~~~lid~~G~i~~~~~g~~~ 147 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAGDLN 147 (168)
T ss_dssp SEEEEECTTSBEEEEEESCCC
T ss_pred CEEEEECCCCeEEEEEeCCCC
Confidence 965555 678754 4667654
No 323
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.64 E-value=7.4e-08 Score=73.29 Aligned_cols=65 Identities=22% Similarity=0.395 Sum_probs=48.3
Q ss_pred HHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cC-------hhhhhhCCCccccEEEEEeCCe
Q psy160 201 MLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD-------PQLAKRYSIKTFPALVYFRNGN 272 (346)
Q Consensus 201 ~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~-------~~~~~~~~i~~~Pti~~~~~g~ 272 (346)
.++++++. +++++ ||++||++|+.+.|.+.+++.. +.++.+ .+ ..+++.+++.++|++ |.+|+
T Consensus 12 ~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~ 82 (116)
T 2e7p_A 12 KAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGK 82 (116)
T ss_dssp HHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred HHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 34445544 35555 9999999999999999998654 345666 22 358899999999999 56887
Q ss_pred EE
Q psy160 273 PL 274 (346)
Q Consensus 273 ~~ 274 (346)
.+
T Consensus 83 ~v 84 (116)
T 2e7p_A 83 QI 84 (116)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 324
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.63 E-value=7.3e-08 Score=79.64 Aligned_cols=74 Identities=18% Similarity=0.367 Sum_probs=56.3
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCce------EEEEE---c-ChhhhhhC--------------------
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGI------HMVKI---Q-DPQLAKRY-------------------- 257 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i------~~~~i---~-~~~~~~~~-------------------- 257 (346)
..++++|.||++||++|+.+.|.+.++.+++.+.++ .++.+ . .++..++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 357999999999999999999999999999875446 88887 2 35555554
Q ss_pred -----CCccccEEEEE-eCCeEE-EeecCcc
Q psy160 258 -----SIKTFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 258 -----~i~~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
++.++|+++++ ++|+.+ .+.|..+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 168 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVT 168 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCC
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCC
Confidence 68899977666 678754 4667654
No 325
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.62 E-value=9.7e-08 Score=87.22 Aligned_cols=73 Identities=15% Similarity=0.268 Sum_probs=60.1
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc------------------------------ChhhhhhCC
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ------------------------------DPQLAKRYS 258 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~------------------------------~~~~~~~~~ 258 (346)
.++++|.||++||++|+.+.|.+.++++++++.++.++.|. +..+++.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 57999999999999999999999999999976457777762 246889999
Q ss_pred CccccEEEEE-eCCeEE-EeecCcc
Q psy160 259 IKTFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 259 i~~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
|.++|+++++ ++|+.+ .+.|..+
T Consensus 162 V~~~Pt~~lID~~G~Iv~~~~G~~~ 186 (352)
T 2hyx_A 162 NRYWPAEYLIDATGTVRHIKFGEGD 186 (352)
T ss_dssp CCEESEEEEECTTSBEEEEEESBCC
T ss_pred CCccCEEEEEeCCCeEEEEEcCCCC
Confidence 9999999888 678754 4667654
No 326
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.62 E-value=1.9e-07 Score=74.86 Aligned_cols=88 Identities=10% Similarity=0.118 Sum_probs=60.6
Q ss_pred HHHHhcCCcEEEEEECCCChhHHHHHHHH---HHHHhhccCCCcEEEEeC-----ChhhHHhhCCCCcceEEEEec--CC
Q psy160 98 DKLLEENEFVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA-----DPRYARKWGVTKLPAVVYFRH--RF 167 (346)
Q Consensus 98 ~~~~~~~~~~lv~F~~~~C~~c~~~~~~~---~~~a~~~~~~~i~~~~~~-----~~~l~~~~~i~~~Ptl~~~~~--g~ 167 (346)
...-+.+++++|.||++||..|+.|.... .++++.++. ++.++++| ...+.++|++.++|+++++.. |+
T Consensus 36 ~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~ 114 (153)
T 2dlx_A 36 ECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQ 114 (153)
T ss_dssp HHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCC
T ss_pred HHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCc
Confidence 33335578999999999999999997543 334443322 35666654 346889999999999999964 54
Q ss_pred c-ceecCCcchhHHHHHHHhhc
Q psy160 168 P-SIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 168 ~-~~y~g~~~~~~~i~~fi~~~ 188 (346)
. ..+.| .+ .+++++++.+.
T Consensus 115 ~l~~~~g-~~-~~~fl~~L~~~ 134 (153)
T 2dlx_A 115 KLVEWHQ-LD-VSSFLDQVTGF 134 (153)
T ss_dssp CCEEESS-CC-HHHHHHHHHHH
T ss_pred EeeecCC-CC-HHHHHHHHHHH
Confidence 3 33555 55 44777777653
No 327
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.62 E-value=7.6e-08 Score=79.88 Aligned_cols=84 Identities=14% Similarity=0.265 Sum_probs=61.9
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--------------------------------ChhhHH
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--------------------------------~~~l~~ 150 (346)
.+++++|.|+++||++|+...|.+.++++++... +.++.++ ...+++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 110 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAK 110 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHH
Confidence 4578999999999999999999999999998654 5555442 346889
Q ss_pred hhCCCCcceEEEEe-cCCcceecCCcc---------hhHHHHHHHhhc
Q psy160 151 KWGVTKLPAVVYFR-HRFPSIYRGDLS---------EEEEVLQWLITQ 188 (346)
Q Consensus 151 ~~~i~~~Ptl~~~~-~g~~~~y~g~~~---------~~~~i~~fi~~~ 188 (346)
.|+|.++|+++++. +|+. .+.|... ..++|.+.+.+.
T Consensus 111 ~~~v~~~P~~~lid~~G~i-~~~g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 111 AYRALRTPEVFLFDERRLL-RYHGRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp HTTCCEESEEEEECTTCBE-EEEECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred HcCCCCCCeEEEECCCCcE-EEEEecCCccccccccCHHHHHHHHHHH
Confidence 99999999999994 4653 3334431 123666666654
No 328
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.61 E-value=7.9e-08 Score=80.27 Aligned_cols=78 Identities=21% Similarity=0.283 Sum_probs=58.0
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC--------------------------------ChHHHHhcCCCC
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS--------------------------------DTEAAAKYNIIN 48 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--------------------------------~~~~c~~~~i~~ 48 (346)
|.||++||++|+...|.+.++++.+...++.++.++ +.+++..|+|.+
T Consensus 51 v~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 130 (196)
T 2ywi_A 51 IMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAAC 130 (196)
T ss_dssp EEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCE
T ss_pred EEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCC
Confidence 579999999999999999999999866677665542 246889999999
Q ss_pred CCeEEEEe-CCceee----------ecCCCCCHHHHHHHHhc
Q psy160 49 LPSLVYFR-KQVPLL----------YDGDLFDEEKILTWLTS 79 (346)
Q Consensus 49 ~Ptl~~f~-~~~~~~----------y~G~~~~~~~i~~~i~~ 79 (346)
+|+++++. +|.... +.|..+. +++.+.|.+
T Consensus 131 ~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~-~~l~~~i~~ 171 (196)
T 2ywi_A 131 TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTG-ESIRAALDA 171 (196)
T ss_dssp ESEEEEEETTCBEEEEECSSSCCTTTCCCCCC-HHHHHHHHH
T ss_pred CCeEEEEcCCCeEEEccccCcccccccCccCH-HHHHHHHHH
Confidence 99999986 555432 2354444 366655543
No 329
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.57 E-value=1.5e-07 Score=69.84 Aligned_cols=78 Identities=9% Similarity=0.064 Sum_probs=56.3
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHH
Q psy160 104 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEE 180 (346)
Q Consensus 104 ~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~ 180 (346)
+.+.+++|+++||++|+.+.+.+++++.. ..+..++++ .+.++.+|| .+.|++ +.+|+... .|..+ .+.
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~---i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~~-~~g~~-~~~ 86 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDR---FILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFLM-MHRVN-TSK 86 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSS---SEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEEE-ESSCC-HHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhC---CeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEEE-ecCCC-HHH
Confidence 35689999999999999999999877643 223334444 567899999 999986 45777542 34455 347
Q ss_pred HHHHHhhcc
Q psy160 181 VLQWLITQK 189 (346)
Q Consensus 181 i~~fi~~~~ 189 (346)
|.+++....
T Consensus 87 l~~~l~~~~ 95 (100)
T 1wjk_A 87 LEKQLRKLS 95 (100)
T ss_dssp HHHHHHSSS
T ss_pred HHHHHHHHH
Confidence 888887654
No 330
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.57 E-value=1.3e-07 Score=80.65 Aligned_cols=70 Identities=20% Similarity=0.342 Sum_probs=56.2
Q ss_pred CC-cEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--------------------------------ChhhHH
Q psy160 104 NE-FVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------------DPRYAR 150 (346)
Q Consensus 104 ~~-~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--------------------------------~~~l~~ 150 (346)
++ +++|.|+++||++|+..+|.+.++++++...++.++.++ ...+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 45 499999999999999999999999999966556655442 347899
Q ss_pred hhCCCCcceEEEEe-cCCcceecCC
Q psy160 151 KWGVTKLPAVVYFR-HRFPSIYRGD 174 (346)
Q Consensus 151 ~~~i~~~Ptl~~~~-~g~~~~y~g~ 174 (346)
.|+|...|+++++. +|+ +.|.|.
T Consensus 138 ~~~v~~~P~~~liD~~G~-i~~~g~ 161 (218)
T 3u5r_E 138 AYGAACTPDFFLYDRERR-LVYHGQ 161 (218)
T ss_dssp HHTCCEESEEEEECTTCB-EEEEEC
T ss_pred HcCCCCCCeEEEECCCCc-EEEecc
Confidence 99999999999995 454 456654
No 331
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.55 E-value=1.4e-07 Score=75.66 Aligned_cols=68 Identities=12% Similarity=0.233 Sum_probs=51.2
Q ss_pred HHhccceEEEEEEcCCChhhHHHHHHH---HHHHhhcCcCceEEEEE-----cChhhhhhCCCccccEEEEEeC--CeE
Q psy160 205 MVEETQYLAVYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI-----QDPQLAKRYSIKTFPALVYFRN--GNP 273 (346)
Q Consensus 205 ~~~~~~~~lv~F~~~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i-----~~~~~~~~~~i~~~Pti~~~~~--g~~ 273 (346)
..+++++++|.|+++||..|+.|.... .++++.++. ++.+..+ +...+.++|++.++|+++++.. |+.
T Consensus 38 Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~ 115 (153)
T 2dlx_A 38 GQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQK 115 (153)
T ss_dssp HHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCC
T ss_pred HHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcE
Confidence 345689999999999999999996554 345555543 5667776 2345789999999999999964 543
No 332
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.54 E-value=4.4e-07 Score=75.03 Aligned_cols=74 Identities=16% Similarity=0.308 Sum_probs=58.1
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-C-----hhhhhhCCCc-------------------
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-D-----PQLAKRYSIK------------------- 260 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-~-----~~~~~~~~i~------------------- 260 (346)
.+++++|.||++||++|..+.+.+.++.+++.+.++.++.+ + . ..+.+++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 35789999999999999999999999999987546888777 2 2 3456777764
Q ss_pred ----cccEEEEE-eCCeEE-EeecCcc
Q psy160 261 ----TFPALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 261 ----~~Pti~~~-~~g~~~-~y~g~~~ 281 (346)
++|+++++ ++|+.+ .+.|...
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~ 165 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAE 165 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCC
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCc
Confidence 89999998 678753 4677653
No 333
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.54 E-value=1.1e-07 Score=68.04 Aligned_cols=71 Identities=21% Similarity=0.397 Sum_probs=52.6
Q ss_pred EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---C----hhhHHhhC--CCCcceEEEEecCCcceecCCcchh
Q psy160 108 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---D----PRYARKWG--VTKLPAVVYFRHRFPSIYRGDLSEE 178 (346)
Q Consensus 108 lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~----~~l~~~~~--i~~~Ptl~~~~~g~~~~y~g~~~~~ 178 (346)
++.|+++||++|+++.+.+++++....+ +.+..+| + ..+++++| +.++|++ |.+|+.+ |..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~--i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i---~~~--- 72 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHI---GGY--- 72 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEE---ESS---
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC--ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEE---ECH---
Confidence 6789999999999999999999876543 6666655 1 37899999 9999998 3466532 222
Q ss_pred HHHHHHHhhc
Q psy160 179 EEVLQWLITQ 188 (346)
Q Consensus 179 ~~i~~fi~~~ 188 (346)
++|.+++.+.
T Consensus 73 ~~l~~~~~~~ 82 (85)
T 1ego_A 73 TDFAAWVKEN 82 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 2677777653
No 334
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.51 E-value=3.5e-07 Score=75.79 Aligned_cols=69 Identities=20% Similarity=0.296 Sum_probs=56.7
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc--------------------------------Chhhhhh
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ--------------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~--------------------------------~~~~~~~ 256 (346)
.++++|.||++||++|+...|.+.++.+++.+. +.++.+. +..+++.
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 579999999999999999999999999999864 7777762 2357889
Q ss_pred CCCccccEEEEE-eCCeEEEeecC
Q psy160 257 YSIKTFPALVYF-RNGNPLIFEGE 279 (346)
Q Consensus 257 ~~i~~~Pti~~~-~~g~~~~y~g~ 279 (346)
|++.++|+++++ ++|+.+ +.|.
T Consensus 112 ~~v~~~P~~~lid~~G~i~-~~g~ 134 (188)
T 2cvb_A 112 YRALRTPEVFLFDERRLLR-YHGR 134 (188)
T ss_dssp TTCCEESEEEEECTTCBEE-EEEC
T ss_pred cCCCCCCeEEEECCCCcEE-EEEe
Confidence 999999999999 567643 4454
No 335
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.50 E-value=2.3e-07 Score=79.14 Aligned_cols=70 Identities=24% Similarity=0.389 Sum_probs=58.1
Q ss_pred ceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c------------------------------ChhhhhhC
Q psy160 210 QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q------------------------------DPQLAKRY 257 (346)
Q Consensus 210 ~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~------------------------------~~~~~~~~ 257 (346)
.+++|.||++||++|....|.+.++.+++++.++.++.| + +..+++.|
T Consensus 60 ~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 139 (218)
T 3u5r_E 60 PALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAY 139 (218)
T ss_dssp SEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHH
T ss_pred CeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHc
Confidence 359999999999999999999999999998656888877 2 24688999
Q ss_pred CCccccEEEEE-eCCeEEEeecCc
Q psy160 258 SIKTFPALVYF-RNGNPLIFEGEN 280 (346)
Q Consensus 258 ~i~~~Pti~~~-~~g~~~~y~g~~ 280 (346)
++.++|+++++ ++|+. .|.|..
T Consensus 140 ~v~~~P~~~liD~~G~i-~~~g~~ 162 (218)
T 3u5r_E 140 GAACTPDFFLYDRERRL-VYHGQF 162 (218)
T ss_dssp TCCEESEEEEECTTCBE-EEEECS
T ss_pred CCCCCCeEEEECCCCcE-EEeccc
Confidence 99999999999 56664 576643
No 336
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.49 E-value=3.2e-07 Score=75.40 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=53.3
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--------------------------cChhhhhhCCCccc
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--------------------------QDPQLAKRYSIKTF 262 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--------------------------~~~~~~~~~~i~~~ 262 (346)
+++++|.||++||++|+.+.|.+.++.++ + +.++.+ .+..+++.|++.++
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~--v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ--G--VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT--T--CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC--C--CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 57899999999999999999999999877 2 333333 24567888999999
Q ss_pred cEEEEE-eCCeEE-EeecCcc
Q psy160 263 PALVYF-RNGNPL-IFEGENK 281 (346)
Q Consensus 263 Pti~~~-~~g~~~-~y~g~~~ 281 (346)
|+++++ ++|+.+ .+.|..+
T Consensus 134 P~~~lid~~G~i~~~~~g~~~ 154 (176)
T 3kh7_A 134 PETYLIDKQGIIRHKIVGVVD 154 (176)
T ss_dssp CEEEEECTTCBEEEEEESCCC
T ss_pred CeEEEECCCCeEEEEEcCCCC
Confidence 988777 577743 4667654
No 337
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.48 E-value=6.2e-08 Score=81.28 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=60.7
Q ss_pred hhhHHhhCCCCcceEEEEecCCcceecCCcch---------hHHHHHHHhhccccCcE-EEccHHHHHHHH--hccceEE
Q psy160 146 PRYARKWGVTKLPAVVYFRHRFPSIYRGDLSE---------EEEVLQWLITQKTEDRI-ELITRVMLETMV--EETQYLA 213 (346)
Q Consensus 146 ~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~---------~~~i~~fi~~~~~~~~v-~~l~~~~~~~~~--~~~~~~l 213 (346)
...++.+||++.|++++ +|+...-.+.... ..+++.++.+...|..- ....+.++..+. ...++++
T Consensus 40 ~~~a~~~gi~gvP~fvi--ngk~~~~~~~~~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~~~g~~y~~l~~p~~~~~~v 117 (197)
T 1un2_A 40 EKAAADVQLRGVPAMFV--NGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGAPQV 117 (197)
T ss_dssp HHHHHHTTCCSSSEEEE--TTTEEECGGGSCCSSHHHHHHHHHHHHHHHTC---------CCBTTTEEECSSCCTTCCSE
T ss_pred HHHHHHcCCCcCCEEEE--cceEecCccccccccHHHHHHHHHHHHHHHHhCcccccccccCCCCCceEccCCCCCCCEE
Confidence 45688999999999976 5552211111111 11244555443322111 112233343332 1356899
Q ss_pred EEEEcCCChhhHHHHHHH---HHHHhhcCcCceEEEEE
Q psy160 214 VYFYKLNCNICDQILEGL---EKVDDECDIYGIHMVKI 248 (346)
Q Consensus 214 v~F~~~~c~~c~~~~~~~---~~la~~~~~~~i~~~~i 248 (346)
|.||+.||+||+.+.|.+ +++++.+.+ ++.|.++
T Consensus 118 veFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~ 154 (197)
T 1un2_A 118 LEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKY 154 (197)
T ss_dssp EEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEE
T ss_pred EEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEe
Confidence 999999999999999999 999999875 7777777
No 338
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.48 E-value=7.4e-08 Score=80.80 Aligned_cols=103 Identities=11% Similarity=0.101 Sum_probs=59.4
Q ss_pred ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCC--H-------HHHHHHHhccCCccccCceeecCHHHHHHHH--hcCC
Q psy160 37 DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFD--E-------EKILTWLTSQDVFEIKNEIEEVNRRMLDKLL--EENE 105 (346)
Q Consensus 37 ~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~--~-------~~i~~~i~~~~~p~~~~~v~~l~~~~~~~~~--~~~~ 105 (346)
+......+||++.|++++ +|....-.++... . .+++.++.+...|...... ..-+++..+. ...+
T Consensus 39 ~~~~a~~~gi~gvP~fvi--ngk~~~~~~~~~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~--~~g~~y~~l~~p~~~~ 114 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV--NGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKKGGGTGAQY--EDGKQYTTLEKPVAGA 114 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTTEEECGGGSCCSSHHHHHHHHHHHHHHHTC---------C--CBTTTEEECSSCCTTC
T ss_pred HHHHHHHcCCCcCCEEEE--cceEecCccccccccHHHHHHHHHHHHHHHHhCccccccccc--CCCCCceEccCCCCCC
Confidence 346778999999999876 5553321122222 1 1356666665554211110 1112222221 1246
Q ss_pred cEEEEEECCCChhHHHHHHHH---HHHHhhccCCCcEEEEeC
Q psy160 106 FVTVFFYETDHKDSVKVLERL---EKIDGETDNMDITFVKMA 144 (346)
Q Consensus 106 ~~lv~F~~~~C~~c~~~~~~~---~~~a~~~~~~~i~~~~~~ 144 (346)
+++|.||++||+||+++.|.| +++++.+.+ ++.|..++
T Consensus 115 ~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~ 155 (197)
T 1un2_A 115 PQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYH 155 (197)
T ss_dssp CSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEE
T ss_pred CEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEec
Confidence 789999999999999999999 999988743 35555543
No 339
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.47 E-value=6.9e-07 Score=72.13 Aligned_cols=85 Identities=14% Similarity=0.275 Sum_probs=62.1
Q ss_pred cCCc-EEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C----------------------ChhhHHhhCCCC
Q psy160 103 ENEF-VTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A----------------------DPRYARKWGVTK 156 (346)
Q Consensus 103 ~~~~-~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~----------------------~~~l~~~~~i~~ 156 (346)
.++. ++|.|| ++||++|....|.+.+++++++..++.++.+ | ...+++.|++.+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 3455 899999 9999999999999999999996555555543 2 457899999999
Q ss_pred ----cceEEEEe-cCC-cceecCCcchh---HHHHHHHhh
Q psy160 157 ----LPAVVYFR-HRF-PSIYRGDLSEE---EEVLQWLIT 187 (346)
Q Consensus 157 ----~Ptl~~~~-~g~-~~~y~g~~~~~---~~i~~fi~~ 187 (346)
+|+.+++. +|+ ...+.|..... +++++.+++
T Consensus 107 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHH
T ss_pred cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHH
Confidence 99999885 576 34566733222 245555443
No 340
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.44 E-value=4.2e-07 Score=64.87 Aligned_cols=58 Identities=21% Similarity=0.434 Sum_probs=46.6
Q ss_pred EEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cC----hhhhhhCC--CccccEEEEEeCCeEE
Q psy160 213 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QD----PQLAKRYS--IKTFPALVYFRNGNPL 274 (346)
Q Consensus 213 lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~----~~~~~~~~--i~~~Pti~~~~~g~~~ 274 (346)
++.|+++||++|+.+.+.+++++..+. ++.+..+ .+ .++.++++ +.++|++ |.+|+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i 69 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHI 69 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEE
Confidence 577999999999999999999998765 4666666 22 47888999 9999998 4578754
No 341
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.44 E-value=4.7e-07 Score=73.61 Aligned_cols=85 Identities=15% Similarity=0.190 Sum_probs=62.5
Q ss_pred cCCcEEEEEECCCChh-HHHHHHHHHHHHhhccC----CCcEEEE--eCC-----------------------------h
Q psy160 103 ENEFVTVFFYETDHKD-SVKVLERLEKIDGETDN----MDITFVK--MAD-----------------------------P 146 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~-c~~~~~~~~~~a~~~~~----~~i~~~~--~~~-----------------------------~ 146 (346)
.+++++|.|+++||++ |....|.+.++++.+.. .++.++. +|. .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3578999999999998 99999999999998842 3455544 431 1
Q ss_pred hhHHhhCCCCcc---------------eEEEE-ecCC-cceecCCcchhHHHHHHHhhc
Q psy160 147 RYARKWGVTKLP---------------AVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 147 ~l~~~~~i~~~P---------------tl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
.+++.|+|...| +++++ ++|+ ...|.|..+. +++.+.+...
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~-~~l~~~l~~l 162 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSA-EQISDSVRRH 162 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCH-HHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCH-HHHHHHHHHH
Confidence 578899999888 66666 5677 3447777764 3777777653
No 342
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.43 E-value=3.5e-07 Score=74.41 Aligned_cols=84 Identities=17% Similarity=0.201 Sum_probs=61.4
Q ss_pred cCCcEEEEEECCCChh-HHHHHHHHHHHHhhccCC---CcEEEEe--CC-----------------------------hh
Q psy160 103 ENEFVTVFFYETDHKD-SVKVLERLEKIDGETDNM---DITFVKM--AD-----------------------------PR 147 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~-c~~~~~~~~~~a~~~~~~---~i~~~~~--~~-----------------------------~~ 147 (346)
.+++++|.|+++||++ |+...|.+.++++++... ++.++.+ |. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4578999999999997 999999999999998532 4555544 31 35
Q ss_pred hHHhhCC---------------CCcceEEEEecCC-cceecCCc--chhHHHHHHHhh
Q psy160 148 YARKWGV---------------TKLPAVVYFRHRF-PSIYRGDL--SEEEEVLQWLIT 187 (346)
Q Consensus 148 l~~~~~i---------------~~~Ptl~~~~~g~-~~~y~g~~--~~~~~i~~fi~~ 187 (346)
+++.|++ ...|+++++.+|+ ...+.|.. + .+++.+.+++
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~-~~~l~~~l~~ 170 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEA-TDRVVADLQA 170 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTC-HHHHHHHHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCC-HHHHHHHHHH
Confidence 6667765 5779999998665 33466665 4 3478777764
No 343
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=2.6e-08 Score=80.30 Aligned_cols=68 Identities=15% Similarity=0.204 Sum_probs=49.4
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHH-HHhhcC-cCceEEEEE---cChhhhhh----------------------CC--
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEK-VDDECD-IYGIHMVKI---QDPQLAKR----------------------YS-- 258 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~-la~~~~-~~~i~~~~i---~~~~~~~~----------------------~~-- 258 (346)
.+++++|.||++||++|+.+.|.+.+ +...+. +.++.++.+ ..++..++ |+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 45789999999999999999999998 887776 335666666 22222333 33
Q ss_pred CccccEEEEE-eCCeEEE
Q psy160 259 IKTFPALVYF-RNGNPLI 275 (346)
Q Consensus 259 i~~~Pti~~~-~~g~~~~ 275 (346)
+.++|+++++ ++|+.+.
T Consensus 112 ~~~~P~~~lid~~G~i~~ 129 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVK 129 (159)
Confidence 5679999988 6787543
No 344
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.42 E-value=5.5e-07 Score=72.45 Aligned_cols=82 Identities=15% Similarity=0.082 Sum_probs=59.0
Q ss_pred CcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C------------------------ChhhHHhhCCC--
Q psy160 105 EFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A------------------------DPRYARKWGVT-- 155 (346)
Q Consensus 105 ~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~------------------------~~~l~~~~~i~-- 155 (346)
++++|.|| ++||++|....|.+.++++++...++.++.+ | ...+++.|++.
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~ 116 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNE 116 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEET
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccc
Confidence 38999998 9999999999999999999986545555543 2 45688999998
Q ss_pred --Ccc--eEEEE-ecCC-cceecCCcch---hHHHHHHHh
Q psy160 156 --KLP--AVVYF-RHRF-PSIYRGDLSE---EEEVLQWLI 186 (346)
Q Consensus 156 --~~P--tl~~~-~~g~-~~~y~g~~~~---~~~i~~fi~ 186 (346)
++| +.+++ ++|+ ...+.|.... .+++++.+.
T Consensus 117 ~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 117 QAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALA 156 (160)
T ss_dssp TTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHH
T ss_pred cCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 999 56655 5676 3345665432 235555554
No 345
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.41 E-value=3.7e-07 Score=77.68 Aligned_cols=79 Identities=16% Similarity=0.271 Sum_probs=56.1
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEE-----------------------------------------
Q psy160 104 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK----------------------------------------- 142 (346)
Q Consensus 104 ~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~----------------------------------------- 142 (346)
++++++.|+++||++|+++.|.+.++++. +..+.+..
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~~ 163 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNAL--GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPASC 163 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhHH
Confidence 36789999999999999999999988753 11111111
Q ss_pred ---eC-ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHHHhhc
Q psy160 143 ---MA-DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 143 ---~~-~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~ 188 (346)
++ +..+++++||+++||+ ++.+|. .+.|..+.+ .|.+++...
T Consensus 164 ~~~v~~~~~l~~~~gV~gtPt~-v~~dG~--~~~G~~~~~-~l~~~l~~~ 209 (216)
T 1eej_A 164 DVDIADHYALGVQLGVSGTPAV-VLSNGT--LVPGYQPPK-EMKEFLDEH 209 (216)
T ss_dssp SCCHHHHHHHHHHHTCCSSSEE-ECTTSC--EEESCCCHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccCEE-EEcCCe--EecCCCCHH-HHHHHHHHh
Confidence 11 3468889999999999 555664 567876644 788877653
No 346
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.41 E-value=5.3e-07 Score=72.69 Aligned_cols=85 Identities=18% Similarity=0.225 Sum_probs=62.0
Q ss_pred cCCcEEEEEECCCChh-HHHHHHHHHHHHhhccC----CCcEEEE--eCC-----------------------------h
Q psy160 103 ENEFVTVFFYETDHKD-SVKVLERLEKIDGETDN----MDITFVK--MAD-----------------------------P 146 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~-c~~~~~~~~~~a~~~~~----~~i~~~~--~~~-----------------------------~ 146 (346)
.+++++|.|+++||++ |....|.+.++.+++.. .++.++. +|. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4578999999999998 99999999999998843 2455544 432 1
Q ss_pred hhHHhhCCCCcc---------------eEEEE-ecCC-cceecCCcchhHHHHHHHhhc
Q psy160 147 RYARKWGVTKLP---------------AVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 147 ~l~~~~~i~~~P---------------tl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
.+++.|+|...| +++++ ++|+ ...|.|..+. +++.+.+.+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~-~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRK-GEIAASIATH 159 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCH-HHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCH-HHHHHHHHHH
Confidence 378899999999 56555 4677 3446777663 4777776653
No 347
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.76 E-value=3.5e-08 Score=79.50 Aligned_cols=83 Identities=18% Similarity=0.126 Sum_probs=54.1
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHH-HHhhcc-CCCcEEEEeC---Chh----------------------hHHhhC--
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEK-IDGETD-NMDITFVKMA---DPR----------------------YARKWG-- 153 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~-~a~~~~-~~~i~~~~~~---~~~----------------------l~~~~~-- 153 (346)
.+++++|.||++||++|+...|.+.+ +...+. ..++.++.++ ... +++.|+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 45789999999999999999999998 877775 4445555443 112 233444
Q ss_pred CCCcceEEEE-ecCCcc-eecCCcchhHHHHHHHhh
Q psy160 154 VTKLPAVVYF-RHRFPS-IYRGDLSEEEEVLQWLIT 187 (346)
Q Consensus 154 i~~~Ptl~~~-~~g~~~-~y~g~~~~~~~i~~fi~~ 187 (346)
+.++|+++++ ++|+.. .+.| .+.. ++.+++..
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~-~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEE-EFASLVQQ 145 (159)
Confidence 5679999988 567633 3444 2322 45554443
No 348
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.40 E-value=3.9e-07 Score=67.56 Aligned_cols=73 Identities=19% Similarity=0.324 Sum_probs=52.0
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c---ChhhhhhCCCccccEEEEEeCCeEEEeecCcccc
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q---DPQLAKRYSIKTFPALVYFRNGNPLIFEGENKIL 283 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~---~~~~~~~~~i~~~Pti~~~~~g~~~~y~g~~~~~ 283 (346)
+.+.++.|+++||++|+.+.+.+++++.. +.+..+ + +++++++|+ .++|++ +.+|+.+ ..+..+.+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~-----i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g~~~~ 85 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDR-----FILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHRVNTS 85 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSS-----SEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESSCCHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhC-----CeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecCCCHH
Confidence 45678899999999999999999887643 445544 3 577899999 999976 5688765 34444322
Q ss_pred ccchhhhhhh
Q psy160 284 KGTYIGTYIS 293 (346)
Q Consensus 284 ~~~~~~~~i~ 293 (346)
.+..+++
T Consensus 86 ---~l~~~l~ 92 (100)
T 1wjk_A 86 ---KLEKQLR 92 (100)
T ss_dssp ---HHHHHHH
T ss_pred ---HHHHHHH
Confidence 2555554
No 349
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.36 E-value=5.5e-07 Score=76.35 Aligned_cols=79 Identities=14% Similarity=0.262 Sum_probs=56.9
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe----------------------------------------
Q psy160 104 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM---------------------------------------- 143 (346)
Q Consensus 104 ~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~---------------------------------------- 143 (346)
.+..++.|+++||++|+++.|.++++.+. +..+.+...
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~~ 163 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYNDL--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVKT 163 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCCC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHHH
Confidence 35789999999999999999999987652 111211111
Q ss_pred C-----ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHHHhhc
Q psy160 144 A-----DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 144 ~-----~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+ +..+++++||++.||+++ .+|+ .+.|..+.+ .|.+++.+.
T Consensus 164 ~~~v~~~~~l~~~~gV~gTPt~vi-~nG~--~~~G~~~~~-~l~~~l~~~ 209 (211)
T 1t3b_A 164 PNIVKKHYELGIQFGVRGTPSIVT-STGE--LIGGYLKPA-DLLRALEET 209 (211)
T ss_dssp SSHHHHHHHHHHHHTCCSSCEEEC-TTSC--CCCSCCCHH-HHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCcCCEEEE-eCCE--EecCCCCHH-HHHHHHHhc
Confidence 1 345778999999999998 6776 566876644 788887654
No 350
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.35 E-value=1.1e-06 Score=71.96 Aligned_cols=80 Identities=11% Similarity=0.217 Sum_probs=58.6
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---------------------------------------
Q psy160 104 NEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA--------------------------------------- 144 (346)
Q Consensus 104 ~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~--------------------------------------- 144 (346)
.++.++.|+++||++|.++.|.+.++.+...+..+.+..+.
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~~~ 101 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKANET 101 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCSHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCCHH
Confidence 35789999999999999999999999887644333333321
Q ss_pred -------------------------------ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHHHhhc
Q psy160 145 -------------------------------DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 145 -------------------------------~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+..+++++||.++||+++ +|+ .+.|..+.+ .+.+.+.+.
T Consensus 102 ~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~--~~~G~~~~~-~l~~~i~~~ 171 (175)
T 3gyk_A 102 GVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA--LVPGFVEQS-QLQDAVDRA 171 (175)
T ss_dssp HHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE--EECSCCCHH-HHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE--EeeCCCCHH-HHHHHHHHH
Confidence 234678999999999987 564 567877644 777777653
No 351
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.33 E-value=2e-06 Score=69.10 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=56.8
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c------------------------ChhhhhhCCCc-
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q------------------------DPQLAKRYSIK- 260 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~------------------------~~~~~~~~~i~- 260 (346)
+++++|.|| ++||++|....|.+.++.+++++.++.++.+ + +..+++.|++.
T Consensus 36 k~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~ 115 (160)
T 1xvw_A 36 AKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFN 115 (160)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEE
T ss_pred CCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcc
Confidence 348999998 9999999999999999999997546777776 1 45688899998
Q ss_pred ---ccc--EEEEE-eCCeEE-EeecCc
Q psy160 261 ---TFP--ALVYF-RNGNPL-IFEGEN 280 (346)
Q Consensus 261 ---~~P--ti~~~-~~g~~~-~y~g~~ 280 (346)
++| +++++ ++|+.+ .+.|..
T Consensus 116 ~~~~~p~~~~~lid~~G~i~~~~~g~~ 142 (160)
T 1xvw_A 116 EQAGIANRGTFVVDRSGIIRFAEMKQP 142 (160)
T ss_dssp TTTTEECSEEEEECTTSBEEEEEECCT
T ss_pred ccCCCeeeeEEEECCCCeEEEEEecCC
Confidence 999 66555 678753 355654
No 352
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.32 E-value=5.9e-07 Score=74.45 Aligned_cols=86 Identities=12% Similarity=0.130 Sum_probs=62.6
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEE--eC--------------------------ChhhHHhhC
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MA--------------------------DPRYARKWG 153 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~~--------------------------~~~l~~~~~ 153 (346)
.+++++|.|| ++||++|...+|.+.++++++...++.++. +| ...+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 4578999999 999999999999999999988543444443 33 345788999
Q ss_pred CC------CcceEEEE-ecCC-cceecCCcc---hhHHHHHHHhhc
Q psy160 154 VT------KLPAVVYF-RHRF-PSIYRGDLS---EEEEVLQWLITQ 188 (346)
Q Consensus 154 i~------~~Ptl~~~-~~g~-~~~y~g~~~---~~~~i~~fi~~~ 188 (346)
+. ..|+++++ ++|+ ...+.|... ..+++++.++..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 98 89999999 4676 334555431 233677776653
No 353
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.32 E-value=1.7e-06 Score=69.84 Aligned_cols=70 Identities=16% Similarity=0.267 Sum_probs=56.7
Q ss_pred ceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c----------------------ChhhhhhCCCcc---
Q psy160 210 QYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q----------------------DPQLAKRYSIKT--- 261 (346)
Q Consensus 210 ~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~----------------------~~~~~~~~~i~~--- 261 (346)
.+++|.|| ++||++|....|.+.++.+++++.++.++.+ + +..+++.|++.+
T Consensus 30 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~ 109 (161)
T 3drn_A 30 HNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFIL 109 (161)
T ss_dssp SEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSS
T ss_pred CCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCc
Confidence 34899999 9999999999999999999997646777776 2 356888999999
Q ss_pred -ccEEEEE-eCCeEE-EeecC
Q psy160 262 -FPALVYF-RNGNPL-IFEGE 279 (346)
Q Consensus 262 -~Pti~~~-~~g~~~-~y~g~ 279 (346)
+|+.+++ ++|+.+ .+.|.
T Consensus 110 ~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 110 PARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp CCCEEEEECTTSBEEEEEECS
T ss_pred ccceEEEECCCCEEEEEEecC
Confidence 9999888 578743 46663
No 354
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.31 E-value=1.6e-06 Score=70.24 Aligned_cols=41 Identities=0% Similarity=0.074 Sum_probs=35.0
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||++|...+|.+.++++++.+.++.++.+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAF 71 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEE
Confidence 46889999999999999999999999999986545666654
No 355
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.31 E-value=1e-06 Score=71.78 Aligned_cols=84 Identities=10% Similarity=0.090 Sum_probs=57.5
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC----------C----hhhH-------------------
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA----------D----PRYA------------------- 149 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~----------~----~~l~------------------- 149 (346)
.+++++|.|+++||++|+ .+|.+.++++++.+.++.++.++ . .+.+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 468899999999999999 99999999999865455555441 0 1112
Q ss_pred -----------HhhCCCCcc------eEEEE-ecCC-cceecCCcchhHHHHHHHhhc
Q psy160 150 -----------RKWGVTKLP------AVVYF-RHRF-PSIYRGDLSEEEEVLQWLITQ 188 (346)
Q Consensus 150 -----------~~~~i~~~P------tl~~~-~~g~-~~~y~g~~~~~~~i~~fi~~~ 188 (346)
+.|++.++| +.+++ ++|+ ...+.|..+.+ .+.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~-~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPS-SLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGG-GGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHH-HHHHHHHHH
Confidence 246888999 66666 5677 34567766543 666666543
No 356
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.30 E-value=1.8e-06 Score=71.76 Aligned_cols=41 Identities=5% Similarity=0.033 Sum_probs=34.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||+.|...+|.+.++++++.+.++.++.+
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 87 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 87 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45789999999999999999999999999986545655544
No 357
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.30 E-value=1.2e-06 Score=73.13 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=64.0
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C--------------------------ChhhHHhhC
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A--------------------------DPRYARKWG 153 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~--------------------------~~~l~~~~~ 153 (346)
.+++++|.|| ++||++|....|.+.++++++...++.++.+ | ...+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3578999999 9999999999999999999885444554433 2 345788999
Q ss_pred CC-----CcceEEEEe-cCC-cceecCCcc---hhHHHHHHHhhcc
Q psy160 154 VT-----KLPAVVYFR-HRF-PSIYRGDLS---EEEEVLQWLITQK 189 (346)
Q Consensus 154 i~-----~~Ptl~~~~-~g~-~~~y~g~~~---~~~~i~~fi~~~~ 189 (346)
+. ..|+++++. +|+ ...+.|... ..+++++.++...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 999999995 576 333555431 2347777777654
No 358
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.25 E-value=3.6e-06 Score=68.08 Aligned_cols=41 Identities=5% Similarity=0.071 Sum_probs=34.7
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||++|...+|.+.++++++.+.++.++.+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 70 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAF 70 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 45789999999999999999999999999986545666554
No 359
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.25 E-value=1.8e-06 Score=70.11 Aligned_cols=73 Identities=11% Similarity=0.323 Sum_probs=54.9
Q ss_pred ccceEEEEEEcCCChh-hHHHHHHHHHHHhhcCcC---ceEEEEEc-C------------------------------hh
Q psy160 208 ETQYLAVYFYKLNCNI-CDQILEGLEKVDDECDIY---GIHMVKIQ-D------------------------------PQ 252 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~-c~~~~~~~~~la~~~~~~---~i~~~~i~-~------------------------------~~ 252 (346)
..++++|.||++||++ |....|.+.++.+++.+. ++.++.++ + ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3579999999999997 999999999999998742 57777772 1 24
Q ss_pred hhhhCC---------------CccccEEEEEeCCeEE-EeecCc
Q psy160 253 LAKRYS---------------IKTFPALVYFRNGNPL-IFEGEN 280 (346)
Q Consensus 253 ~~~~~~---------------i~~~Pti~~~~~g~~~-~y~g~~ 280 (346)
+++.|+ +.+.|+++++.+|+.+ .+.|..
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~ 157 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDK 157 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCC
Confidence 555555 4578999999977744 345544
No 360
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.25 E-value=7e-07 Score=74.74 Aligned_cols=86 Identities=13% Similarity=0.147 Sum_probs=63.1
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------------~~~l~~ 150 (346)
.+++++|.|| ++||++|....|.+.++++++...++.++.+ | ...+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 4578999999 9999999999999999999885444544433 2 346889
Q ss_pred hhCCC-----CcceEEEEe-cCC-cceecCCcc---hhHHHHHHHhhc
Q psy160 151 KWGVT-----KLPAVVYFR-HRF-PSIYRGDLS---EEEEVLQWLITQ 188 (346)
Q Consensus 151 ~~~i~-----~~Ptl~~~~-~g~-~~~y~g~~~---~~~~i~~fi~~~ 188 (346)
.|++. ..|+++++. +|+ ...+.|... ..+++.+.+...
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99999 999999995 566 333555431 244777777654
No 361
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.23 E-value=2.8e-06 Score=68.92 Aligned_cols=73 Identities=21% Similarity=0.267 Sum_probs=55.6
Q ss_pred cceEEEEEEcCCChh-hHHHHHHHHHHHhhcCc----CceEEEEE--cC-----------------------------hh
Q psy160 209 TQYLAVYFYKLNCNI-CDQILEGLEKVDDECDI----YGIHMVKI--QD-----------------------------PQ 252 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~-c~~~~~~~~~la~~~~~----~~i~~~~i--~~-----------------------------~~ 252 (346)
.++++|.||++||++ |....|.+.++.+++.. .++.++.+ +. ..
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 578999999999998 99999999999998842 26777776 21 14
Q ss_pred hhhhCCCcccc---------------EEEEE-eCCeEEE-eecCcc
Q psy160 253 LAKRYSIKTFP---------------ALVYF-RNGNPLI-FEGENK 281 (346)
Q Consensus 253 ~~~~~~i~~~P---------------ti~~~-~~g~~~~-y~g~~~ 281 (346)
+++.|++...| +++++ ++|+.+. |.|..+
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~ 151 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRS 151 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCC
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCC
Confidence 77889998888 66666 6787543 556553
No 362
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.22 E-value=2.5e-06 Score=63.52 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=49.2
Q ss_pred HHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC--------hhhHHhhCCCCcceEEEEecC
Q psy160 95 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD--------PRYARKWGVTKLPAVVYFRHR 166 (346)
Q Consensus 95 ~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~--------~~l~~~~~i~~~Ptl~~~~~g 166 (346)
+.+++++.++ .++.|+++||++|+++.+.+.+++.... ++.++.++. ..+.+.+|+.++|+++ .+|
T Consensus 3 ~~~~~~i~~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~--~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~--~~g 76 (105)
T 1kte_A 3 AFVNSKIQPG--KVVVFIKPTCPFCRKTQELLSQLPFKEG--LLEFVDITATSDTNEIQDYLQQLTGARTVPRVF--IGK 76 (105)
T ss_dssp HHHHHHCCTT--CEEEEECSSCHHHHHHHHHHHHSCBCTT--SEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE--ETT
T ss_pred hHHHhhcccC--CEEEEEcCCCHhHHHHHHHHHHcCCCCC--ccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE--ECC
Confidence 4556666554 3678999999999999999998765532 266677663 2478899999999973 366
Q ss_pred C
Q psy160 167 F 167 (346)
Q Consensus 167 ~ 167 (346)
+
T Consensus 77 ~ 77 (105)
T 1kte_A 77 E 77 (105)
T ss_dssp E
T ss_pred E
Confidence 4
No 363
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.22 E-value=3e-06 Score=68.15 Aligned_cols=73 Identities=27% Similarity=0.415 Sum_probs=55.0
Q ss_pred cceEEEEEEcCCChh-hHHHHHHHHHHHhhcCc----CceEEEEE--cC-----------------------------hh
Q psy160 209 TQYLAVYFYKLNCNI-CDQILEGLEKVDDECDI----YGIHMVKI--QD-----------------------------PQ 252 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~-c~~~~~~~~~la~~~~~----~~i~~~~i--~~-----------------------------~~ 252 (346)
.++++|.||++||++ |....|.+.++.+++++ .++.++.+ +. ..
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 579999999999998 99999999999988853 26777776 21 13
Q ss_pred hhhhCCCcccc---------------EEEEE-eCCeEEE-eecCcc
Q psy160 253 LAKRYSIKTFP---------------ALVYF-RNGNPLI-FEGENK 281 (346)
Q Consensus 253 ~~~~~~i~~~P---------------ti~~~-~~g~~~~-y~g~~~ 281 (346)
+++.|++...| +++++ ++|+.+. +.|..+
T Consensus 103 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~ 148 (164)
T 2ggt_A 103 VARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKR 148 (164)
T ss_dssp HHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCC
T ss_pred HHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCC
Confidence 77889999999 55555 6787543 455543
No 364
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.20 E-value=4e-06 Score=68.25 Aligned_cols=40 Identities=10% Similarity=0.175 Sum_probs=34.2
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|+ ..|.+.++.+++.+.++.++.+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~v 70 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGF 70 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEE
Confidence 357999999999999999 9999999999987645766665
No 365
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.20 E-value=3.5e-06 Score=62.71 Aligned_cols=69 Identities=19% Similarity=0.322 Sum_probs=50.3
Q ss_pred HHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cC-------hhhhhhCCCccccEEEEEeCC
Q psy160 200 VMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD-------PQLAKRYSIKTFPALVYFRNG 271 (346)
Q Consensus 200 ~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~-------~~~~~~~~i~~~Pti~~~~~g 271 (346)
+.++++++++. ++.|+++||++|+.+.+.+.+++..+. ++.+..+ .+ ..+.+.+++.++|++ |.+|
T Consensus 3 ~~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~--~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g 76 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG--LLEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGK 76 (105)
T ss_dssp HHHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT--SEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETT
T ss_pred hHHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC--ccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECC
Confidence 34555655543 567999999999999999999876643 3666666 23 247788999999997 5578
Q ss_pred eEE
Q psy160 272 NPL 274 (346)
Q Consensus 272 ~~~ 274 (346)
+.+
T Consensus 77 ~~i 79 (105)
T 1kte_A 77 ECI 79 (105)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 366
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.19 E-value=2.1e-06 Score=70.70 Aligned_cols=41 Identities=5% Similarity=0.063 Sum_probs=34.9
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||++|+..+|.+.++++++.+.++.++.+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~v 88 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAF 88 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 45789999999999999999999999999986555666654
No 367
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.17 E-value=5.4e-06 Score=68.29 Aligned_cols=41 Identities=5% Similarity=0.020 Sum_probs=34.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||+.|...+|.+.++++++...++.++.+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 86 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAF 86 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45789999999999999999999999999986545655554
No 368
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.17 E-value=1e-06 Score=74.98 Aligned_cols=71 Identities=14% Similarity=0.285 Sum_probs=50.1
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEE----------------------------------------------E
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMV----------------------------------------------K 34 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~----------------------------------------------~ 34 (346)
+.|+++||++|+++.|.++++++. ++.+. .
T Consensus 91 v~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
T 1eej_A 91 TVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPASCDVD 166 (216)
T ss_dssp EEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCCCSCC
T ss_pred EEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhHHHHH
Confidence 479999999999999999988752 11111 0
Q ss_pred cC-ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHHHHhc
Q psy160 35 IS-DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWLTS 79 (346)
Q Consensus 35 ~~-~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~~i~~ 79 (346)
++ +.+++.++||++.||+ ++.+|.. +.|.... +.+.++|..
T Consensus 167 v~~~~~l~~~~gV~gtPt~-v~~dG~~--~~G~~~~-~~l~~~l~~ 208 (216)
T 1eej_A 167 IADHYALGVQLGVSGTPAV-VLSNGTL--VPGYQPP-KEMKEFLDE 208 (216)
T ss_dssp HHHHHHHHHHHTCCSSSEE-ECTTSCE--EESCCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCEE-EEcCCeE--ecCCCCH-HHHHHHHHH
Confidence 11 3578889999999998 5666643 5676554 477777654
No 369
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.16 E-value=3.2e-06 Score=69.92 Aligned_cols=71 Identities=15% Similarity=0.251 Sum_probs=56.9
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c--------------------------ChhhhhhCCC
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q--------------------------DPQLAKRYSI 259 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~--------------------------~~~~~~~~~i 259 (346)
.++++|.|| ++||++|....|.+.++.+++.+.++.++.+ + +..+++.|++
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 110 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDV 110 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCC
Confidence 478999999 9999999999999999999987545777666 2 3457888999
Q ss_pred c------cccEEEEE-eCCeEE-EeecC
Q psy160 260 K------TFPALVYF-RNGNPL-IFEGE 279 (346)
Q Consensus 260 ~------~~Pti~~~-~~g~~~-~y~g~ 279 (346)
. +.|+++++ ++|+.+ .+.|.
T Consensus 111 ~~~~~g~~~P~~~lid~~G~i~~~~~g~ 138 (187)
T 1we0_A 111 LNEETGLADRGTFIIDPDGVIQAIEINA 138 (187)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CcCCCCceeeEEEEECCCCeEEEEEecC
Confidence 8 89999999 678754 34554
No 370
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.16 E-value=4.1e-06 Score=69.98 Aligned_cols=86 Identities=14% Similarity=0.227 Sum_probs=61.5
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------------~~~l~~ 150 (346)
.+++++|.|| ++||++|...+|.+.+++++++..++.++.+ | ...+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 4578999999 9999999999999999999985545555543 2 235888
Q ss_pred hhCCC------CcceEEEEe-cCC-cceecCCcc---hhHHHHHHHhhc
Q psy160 151 KWGVT------KLPAVVYFR-HRF-PSIYRGDLS---EEEEVLQWLITQ 188 (346)
Q Consensus 151 ~~~i~------~~Ptl~~~~-~g~-~~~y~g~~~---~~~~i~~fi~~~ 188 (346)
.|++. .+|+++++. +|+ ...+.|... ..+++++.+...
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 99998 799888885 565 233445322 134677776653
No 371
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.14 E-value=4.7e-06 Score=69.00 Aligned_cols=41 Identities=5% Similarity=0.033 Sum_probs=34.7
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||++|...+|.+.++++++++.++.++.+
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 85 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 85 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEE
Confidence 46899999999999999999999999999996545555543
No 372
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.13 E-value=1.3e-06 Score=73.95 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=51.3
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEE--E----------------------------------------c---
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMV--K----------------------------------------I--- 35 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~--~----------------------------------------~--- 35 (346)
+.|+++||++|+++.|.++++.+. ++.+. . +
T Consensus 91 v~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~~~~~ 166 (211)
T 1t3b_A 91 TVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVKTPNI 166 (211)
T ss_dssp EEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCCCSSH
T ss_pred EEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHHHHHH
Confidence 479999999999999999987652 22221 0 0
Q ss_pred --CChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHHHHhcc
Q psy160 36 --SDTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWLTSQ 80 (346)
Q Consensus 36 --~~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~~i~~~ 80 (346)
.+.+++.++||++.||+++ .+|. .+.|.... +.+.++|.+.
T Consensus 167 v~~~~~l~~~~gV~gTPt~vi-~nG~--~~~G~~~~-~~l~~~l~~~ 209 (211)
T 1t3b_A 167 VKKHYELGIQFGVRGTPSIVT-STGE--LIGGYLKP-ADLLRALEET 209 (211)
T ss_dssp HHHHHHHHHHHTCCSSCEEEC-TTSC--CCCSCCCH-HHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCcCCEEEE-eCCE--EecCCCCH-HHHHHHHHhc
Confidence 1356788999999999887 6776 35676554 4788877643
No 373
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.13 E-value=8.3e-06 Score=65.94 Aligned_cols=41 Identities=7% Similarity=0.241 Sum_probs=36.4
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|....|.+.++.+++.+.++.++.+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAF 71 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEE
Confidence 35799999999999999999999999999997645888877
No 374
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.09 E-value=7.7e-06 Score=70.71 Aligned_cols=81 Identities=7% Similarity=0.075 Sum_probs=57.2
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEE--e---------------------------------------
Q psy160 105 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK--M--------------------------------------- 143 (346)
Q Consensus 105 ~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~--------------------------------------- 143 (346)
+..++.|+++||++|+++.+.+.++.+. . ++.+.. +
T Consensus 98 k~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g--~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 98 PVIVYVFADPFCPYCKQFWQQARPWVDS-G--KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHT-T--SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CeEEEEEECCCChhHHHHHHHHHHHHhC-C--cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 4579999999999999999998876654 1 233321 1
Q ss_pred ------------CChhhHHhhCCCCcceEEEEe-cCCcceecCCcchhHHHHHHHhhcc
Q psy160 144 ------------ADPRYARKWGVTKLPAVVYFR-HRFPSIYRGDLSEEEEVLQWLITQK 189 (346)
Q Consensus 144 ------------~~~~l~~~~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~~i~~fi~~~~ 189 (346)
.+..+++++||++.||+++.. +|+.....|..+.+ .|.+++.+..
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~-~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQK-TLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHH-HHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHH-HHHHHHHHHH
Confidence 023467899999999999986 35444577877644 7888877653
No 375
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.09 E-value=8.7e-06 Score=66.86 Aligned_cols=41 Identities=10% Similarity=0.094 Sum_probs=35.6
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||++|...+|.+.++++++.+.++.++.+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 77 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAF 77 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEE
Confidence 45789999999999999999999999999997666666655
No 376
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.07 E-value=1.4e-05 Score=64.48 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=36.1
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|....|.+.++.+++.+.++.++.+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 70 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAF 70 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 35799999999999999999999999999987646888777
No 377
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.07 E-value=7.4e-06 Score=68.68 Aligned_cols=86 Identities=13% Similarity=0.186 Sum_probs=61.4
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------------~~~l~~ 150 (346)
.+++++|.|| +.||++|....|.+.+++++++..++.++.+ | ...+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 3578999999 9999999999999999999985545555543 2 236888
Q ss_pred hhCCC------CcceEEEEe-cCCc-ceecCCcc---hhHHHHHHHhhc
Q psy160 151 KWGVT------KLPAVVYFR-HRFP-SIYRGDLS---EEEEVLQWLITQ 188 (346)
Q Consensus 151 ~~~i~------~~Ptl~~~~-~g~~-~~y~g~~~---~~~~i~~fi~~~ 188 (346)
.|++. .+|+++++. +|+. ..+.|... ..+++++.++..
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 99999 999999985 5652 23334322 134677766543
No 378
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.07 E-value=7.9e-06 Score=67.79 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=35.9
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|....|.+.++.+++.+.++.++.+
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 87 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 87 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 35799999999999999999999999999997645777777
No 379
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.05 E-value=8.6e-06 Score=67.24 Aligned_cols=41 Identities=5% Similarity=0.020 Sum_probs=34.7
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||+.|...+|.+.++++++.+.++.++.+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~i 88 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAF 88 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 45789999999999999999999999999986555666554
No 380
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.05 E-value=8.1e-06 Score=68.01 Aligned_cols=72 Identities=13% Similarity=0.225 Sum_probs=56.9
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c--------------------------ChhhhhhCCC
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q--------------------------DPQLAKRYSI 259 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~--------------------------~~~~~~~~~i 259 (346)
.++++|.|| ++||++|....|.+.++.+++.+.++.++.| + +..+++.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 578999999 9999999999999999999987545777766 2 2356778999
Q ss_pred c-----cccEEEEE-eCCeEEE-eecCc
Q psy160 260 K-----TFPALVYF-RNGNPLI-FEGEN 280 (346)
Q Consensus 260 ~-----~~Pti~~~-~~g~~~~-y~g~~ 280 (346)
. ++|+++++ ++|+.+. +.|..
T Consensus 125 ~~~~g~~~P~~~lid~~G~i~~~~~g~~ 152 (195)
T 2bmx_A 125 LNADGVADRVTFIVDPNNEIQFVSATAG 152 (195)
T ss_dssp BCTTSSBCEEEEEECTTSBEEEEEEECT
T ss_pred cccCCCccceEEEEcCCCeEEEEEecCC
Confidence 9 99999999 4777443 44543
No 381
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.04 E-value=7.3e-06 Score=66.93 Aligned_cols=31 Identities=19% Similarity=0.436 Sum_probs=27.9
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHHHHhhcC
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEKVDDECD 239 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~ 239 (346)
.++.++.|+++||++|..+.|.+.++.+++.
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 52 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADP 52 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999988765
No 382
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.04 E-value=2.4e-05 Score=53.98 Aligned_cols=67 Identities=13% Similarity=0.219 Sum_probs=46.8
Q ss_pred EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-ChhhHH---hhCCCCcceEEEEecCCcceecCCcchhHHHHH
Q psy160 108 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYAR---KWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQ 183 (346)
Q Consensus 108 lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~l~~---~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~ 183 (346)
++.|+++||++|++..+.++++. ..+..+.++ ++.+.. ++++.++|++.+ +|+. ..| .+ .+.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~-----i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~--~~g-~~-~~~l~~ 71 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRAG-----LAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH--WSG-FR-PERIKQ 71 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT-----CCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE--EES-CC-HHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHcC-----CCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE--EcC-CC-HHHHHH
Confidence 67899999999999999888752 335566665 444444 899999999984 5542 334 33 336776
Q ss_pred HH
Q psy160 184 WL 185 (346)
Q Consensus 184 fi 185 (346)
++
T Consensus 72 ~l 73 (75)
T 1r7h_A 72 LQ 73 (75)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 383
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.03 E-value=2.5e-05 Score=62.61 Aligned_cols=77 Identities=14% Similarity=0.144 Sum_probs=53.4
Q ss_pred HHHHhcCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCC-cEEEEeC----------------------ChhhHHhhC
Q psy160 98 DKLLEENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMD-ITFVKMA----------------------DPRYARKWG 153 (346)
Q Consensus 98 ~~~~~~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~-i~~~~~~----------------------~~~l~~~~~ 153 (346)
.++..+++++++.|| +.||+.|...+|.+.++.++++..+ +..+.+| ...+++.||
T Consensus 29 ~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 108 (159)
T 2a4v_A 29 KKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLG 108 (159)
T ss_dssp HHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHT
T ss_pred HHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhC
Confidence 334334446788887 8999999999999999999885443 2222322 346888999
Q ss_pred CCCcc-------eEEEEecCC-cceecCCc
Q psy160 154 VTKLP-------AVVYFRHRF-PSIYRGDL 175 (346)
Q Consensus 154 i~~~P-------tl~~~~~g~-~~~y~g~~ 175 (346)
+...| ++++ ++|+ ...+.|..
T Consensus 109 v~~~p~~g~~~~~~li-~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 109 AKKTPLSGSIRSHFIF-VDGKLKFKRVKIS 137 (159)
T ss_dssp CBSSSSSCBCCEEEEE-ETTEEEEEEESCC
T ss_pred CcccccCCccceEEEE-cCCEEEEEEccCC
Confidence 99988 6666 8787 33455643
No 384
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.03 E-value=6e-06 Score=68.60 Aligned_cols=85 Identities=16% Similarity=0.247 Sum_probs=60.1
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------------~~~l~~ 150 (346)
.+++++|.|| ++||++|....|.+.++++++...++.++.+ | ...+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 4578999999 9999999999999999999885434444432 2 246888
Q ss_pred hhCCC-----CcceEEEEe-cCCc-ceecCCcc---hhHHHHHHHhh
Q psy160 151 KWGVT-----KLPAVVYFR-HRFP-SIYRGDLS---EEEEVLQWLIT 187 (346)
Q Consensus 151 ~~~i~-----~~Ptl~~~~-~g~~-~~y~g~~~---~~~~i~~fi~~ 187 (346)
.|++. ..|+++++. +|+. ..+.|... ..+++++.+..
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 156 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDA 156 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 99999 899999994 5663 33444321 13356666554
No 385
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.02 E-value=7.5e-06 Score=69.72 Aligned_cols=84 Identities=17% Similarity=0.267 Sum_probs=60.0
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------------ChhhHHh
Q psy160 104 NEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYARK 151 (346)
Q Consensus 104 ~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------------~~~l~~~ 151 (346)
+++++|.|| +.||+.|....|.+.++++++...++.++.+ | ...+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 478999999 9999999999999999999885444444433 2 2468889
Q ss_pred hCCC------CcceEEEEe-cCCc-ceecCCcc---hhHHHHHHHhh
Q psy160 152 WGVT------KLPAVVYFR-HRFP-SIYRGDLS---EEEEVLQWLIT 187 (346)
Q Consensus 152 ~~i~------~~Ptl~~~~-~g~~-~~y~g~~~---~~~~i~~fi~~ 187 (346)
|++. .+|+++++. +|+. ..+.|... ..+++++.++.
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~ 182 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKA 182 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 9999 999999994 5662 22344321 12366666654
No 386
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.02 E-value=7.1e-06 Score=68.52 Aligned_cols=72 Identities=10% Similarity=0.233 Sum_probs=57.1
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhhh
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 256 (346)
.++++|.|| ++||++|....|.+.++.+++.+.++.++.+ + +..+++.
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRD 112 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHH
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHH
Confidence 468999999 9999999999999999999886545777766 1 3467889
Q ss_pred CCCc-----cccEEEEE-eCCeEEE-eecCc
Q psy160 257 YSIK-----TFPALVYF-RNGNPLI-FEGEN 280 (346)
Q Consensus 257 ~~i~-----~~Pti~~~-~~g~~~~-y~g~~ 280 (346)
|++. +.|+++++ ++|+.+. +.|..
T Consensus 113 ~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~ 143 (198)
T 1zof_A 113 YDVLFEEAIALRGAFLIDKNMKVRHAVINDL 143 (198)
T ss_dssp TTCEETTTEECEEEEEEETTTEEEEEEEESS
T ss_pred hCCcccCCcccceEEEECCCCEEEEEEecCC
Confidence 9998 99999888 5787543 44543
No 387
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.01 E-value=1.2e-05 Score=67.81 Aligned_cols=41 Identities=2% Similarity=0.069 Sum_probs=34.7
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|+++||++|+..+|.++++++++...++.++.+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v 86 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGF 86 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEE
Confidence 45789999999999999999999999999986555666544
No 388
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.00 E-value=1.1e-05 Score=66.39 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=36.2
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|....|.+.++.+++.+.++.++.+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~v 88 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAF 88 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 35799999999999999999999999999998645888777
No 389
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.00 E-value=3.1e-05 Score=63.83 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=35.9
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|....|.+.++.+++++.++.++.+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~i 88 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAF 88 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 35799999999999999999999999999997646777777
No 390
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.00 E-value=2.2e-05 Score=64.56 Aligned_cols=41 Identities=10% Similarity=0.093 Sum_probs=36.1
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|....|.+.++.+++.+.++.++.+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 86 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAF 86 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 35799999999999999999999999999997645777777
No 391
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.95 E-value=3.3e-05 Score=65.09 Aligned_cols=41 Identities=5% Similarity=-0.023 Sum_probs=36.0
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|+...|.+.++.+++++.++.++.+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v 86 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGF 86 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEE
Confidence 35789999999999999999999999999997656888777
No 392
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.95 E-value=2e-05 Score=65.75 Aligned_cols=72 Identities=13% Similarity=0.280 Sum_probs=55.9
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhhh
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 256 (346)
.++++|.|| ++||++|....+.+.++++++++.++.++.| + +..+++.
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 113 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHH
Confidence 478999999 9999999999999999999986546777776 1 1357888
Q ss_pred CCCc------cccEEEEE-eCCeEE-EeecCc
Q psy160 257 YSIK------TFPALVYF-RNGNPL-IFEGEN 280 (346)
Q Consensus 257 ~~i~------~~Pti~~~-~~g~~~-~y~g~~ 280 (346)
|++. ++|+++++ ++|+.+ .+.|..
T Consensus 114 ~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~ 145 (197)
T 1qmv_A 114 YGVLKTDEGIAYRGLFIIDGKGVLRQITVNDL 145 (197)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECT
T ss_pred cCCccCCCCceeeEEEEECCCCcEEEEEeCCC
Confidence 9998 79988888 577643 234543
No 393
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.95 E-value=1.3e-05 Score=66.61 Aligned_cols=71 Identities=18% Similarity=0.368 Sum_probs=55.7
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhhh
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 256 (346)
.++++|.|| ++||++|....|.+.++.+++++.++.++.| + +..+++.
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 110 (192)
T 2h01_A 31 KKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARS 110 (192)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHH
Confidence 468999999 9999999999999999999986445766666 1 2357888
Q ss_pred CCCc-----cccEEEEE-eCCeEEE-eecC
Q psy160 257 YSIK-----TFPALVYF-RNGNPLI-FEGE 279 (346)
Q Consensus 257 ~~i~-----~~Pti~~~-~~g~~~~-y~g~ 279 (346)
|++. ..|+++++ ++|+... +.|.
T Consensus 111 ~gv~~~~g~~~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 111 YDVLFNESVALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp TTCEETTTEECCEEEEECTTSBEEEEEEGG
T ss_pred hCCcCcCCceeeEEEEEcCCCEEEEEEeCC
Confidence 9998 89999999 5777433 3453
No 394
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.95 E-value=1.5e-05 Score=67.51 Aligned_cols=85 Identities=14% Similarity=0.235 Sum_probs=59.1
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------------~~~l~~ 150 (346)
.+++++|.|| +.||+.|....|.+.+++++++..++.++.+ | ...+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 4578899999 9999999999999999999885434444432 2 346888
Q ss_pred hhCCC-----CcceEEEEe-cCCc-ceecCCcc---hhHHHHHHHhh
Q psy160 151 KWGVT-----KLPAVVYFR-HRFP-SIYRGDLS---EEEEVLQWLIT 187 (346)
Q Consensus 151 ~~~i~-----~~Ptl~~~~-~g~~-~~y~g~~~---~~~~i~~fi~~ 187 (346)
.|++. ..|+++++. +|+. ..+.|... ..+++++.++.
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~ 177 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDA 177 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 99998 899888885 4652 22333221 13367666654
No 395
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.93 E-value=3.7e-05 Score=61.60 Aligned_cols=75 Identities=11% Similarity=0.213 Sum_probs=53.3
Q ss_pred HHHHhccceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE------------------------cChhhhhhC
Q psy160 203 ETMVEETQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI------------------------QDPQLAKRY 257 (346)
Q Consensus 203 ~~~~~~~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------------------~~~~~~~~~ 257 (346)
.++....++++|.|| +.||++|....|.+.++.+++++.+ .++.| .+..+++.|
T Consensus 29 ~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 107 (159)
T 2a4v_A 29 KKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLL 107 (159)
T ss_dssp HHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHH
T ss_pred HHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHh
Confidence 333333347888887 8999999999999999999887544 55444 133567788
Q ss_pred CCcccc-------EEEEEeCCeEEE-eecC
Q psy160 258 SIKTFP-------ALVYFRNGNPLI-FEGE 279 (346)
Q Consensus 258 ~i~~~P-------ti~~~~~g~~~~-y~g~ 279 (346)
++...| ++++ ++|+... +.|.
T Consensus 108 gv~~~p~~g~~~~~~li-~~G~i~~~~~g~ 136 (159)
T 2a4v_A 108 GAKKTPLSGSIRSHFIF-VDGKLKFKRVKI 136 (159)
T ss_dssp TCBSSSSSCBCCEEEEE-ETTEEEEEEESC
T ss_pred CCcccccCCccceEEEE-cCCEEEEEEccC
Confidence 888888 6667 9998543 4454
No 396
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.93 E-value=3.4e-05 Score=61.98 Aligned_cols=85 Identities=14% Similarity=0.190 Sum_probs=58.6
Q ss_pred cCCcEEEEEEC-CCChhHHHHHHHHHHHHhhccCCCcEEEE--eC----------------------ChhhHHhhCCCC-
Q psy160 103 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFVK--MA----------------------DPRYARKWGVTK- 156 (346)
Q Consensus 103 ~~~~~lv~F~~-~~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~~----------------------~~~l~~~~~i~~- 156 (346)
.+++++|.||+ .||++|...+|.+.++.++++..++.++. +| ...+++.|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 34688999998 99999999999999999998554454443 22 346778888877
Q ss_pred -----------cceEEEEe-cCCc-ceecCCcc--hhHHHHHHHhh
Q psy160 157 -----------LPAVVYFR-HRFP-SIYRGDLS--EEEEVLQWLIT 187 (346)
Q Consensus 157 -----------~Ptl~~~~-~g~~-~~y~g~~~--~~~~i~~fi~~ 187 (346)
.|+.+++. +|+. ..|.+... ..+++++.+++
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHH
Confidence 89999985 4653 23433221 12356665544
No 397
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.91 E-value=3e-05 Score=60.15 Aligned_cols=67 Identities=10% Similarity=0.140 Sum_probs=49.2
Q ss_pred cCHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC----h----hhHHhhCCCCcceEEEE
Q psy160 92 VNRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD----P----RYARKWGVTKLPAVVYF 163 (346)
Q Consensus 92 l~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~----~----~l~~~~~i~~~Ptl~~~ 163 (346)
-..+.+++++..+. ++.|+++||++|+++.+.+.++.. .+..+.++. + .+++.+++..+|+++
T Consensus 15 ~~~~~~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~i-----~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~-- 85 (130)
T 2cq9_A 15 APVNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMNV-----NYKVVELDLLEYGNQFQDALYKMTGERTVPRIF-- 85 (130)
T ss_dssp CHHHHHHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHTC-----CCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--
T ss_pred HHHHHHHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcCC-----CcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--
Confidence 34566777776654 445999999999999999988653 355666662 2 378899999999984
Q ss_pred ecCC
Q psy160 164 RHRF 167 (346)
Q Consensus 164 ~~g~ 167 (346)
.+|+
T Consensus 86 i~G~ 89 (130)
T 2cq9_A 86 VNGT 89 (130)
T ss_dssp ETTE
T ss_pred ECCE
Confidence 3664
No 398
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.91 E-value=2.4e-05 Score=65.44 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=28.5
Q ss_pred cCCcEEEEEECCCChh-HHHHHHHHHHHHhhcc
Q psy160 103 ENEFVTVFFYETDHKD-SVKVLERLEKIDGETD 134 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~-c~~~~~~~~~~a~~~~ 134 (346)
.+++++|.|+++||++ |...+|.+.++.+.+.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~ 72 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLS 72 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHH
Confidence 4578999999999997 9999999999888773
No 399
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.89 E-value=2.4e-05 Score=65.49 Aligned_cols=66 Identities=15% Similarity=0.270 Sum_probs=53.8
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhhh
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 256 (346)
.++++|.|| ++||++|....+.+.++.+++++.++.++.| + +..+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 468999999 9999999999999999999986546777776 1 2357788
Q ss_pred CCCc------cccEEEEE-eCCeEE
Q psy160 257 YSIK------TFPALVYF-RNGNPL 274 (346)
Q Consensus 257 ~~i~------~~Pti~~~-~~g~~~ 274 (346)
|++. ++|+++++ ++|+..
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~ 140 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLR 140 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEE
T ss_pred cCCccCCCCceeeEEEEECCCCEEE
Confidence 8998 99999888 567643
No 400
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.88 E-value=2.5e-05 Score=66.54 Aligned_cols=85 Identities=14% Similarity=0.204 Sum_probs=59.7
Q ss_pred cCCcEEEEEEC-CCChhHHHHHHHHHHHHhhccCCCcEEEE--eC-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFVK--MA-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~~-~~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~~-----------------------------~~~l~~ 150 (346)
.+++++|.|++ .||++|...+|.+.+++++++..++.++. +| ...+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 45789999996 99999999999999999999654555543 33 125778
Q ss_pred hhCCC------CcceEEEEe-cCC-cceecCCcch---hHHHHHHHhh
Q psy160 151 KWGVT------KLPAVVYFR-HRF-PSIYRGDLSE---EEEVLQWLIT 187 (346)
Q Consensus 151 ~~~i~------~~Ptl~~~~-~g~-~~~y~g~~~~---~~~i~~fi~~ 187 (346)
.|++. .+|+.+++. +|+ ...+.|.... .+++++.+..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 89998 899999985 465 2334443221 2356666544
No 401
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.86 E-value=3.4e-05 Score=54.14 Aligned_cols=69 Identities=14% Similarity=0.290 Sum_probs=46.0
Q ss_pred EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-ChhhHH---hhCCCCcceEEEEecCCcceecCCcchhHHHHH
Q psy160 108 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYAR---KWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQ 183 (346)
Q Consensus 108 lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~l~~---~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~ 183 (346)
++.|+++||++|+++.+.+++.. ..+..++++ ++.+.+ ++|+.++|++. .+|+. ..| .+ .+.|.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~~-----i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~~--~~g-~~-~~~l~~ 71 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENRG-----FDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDLS--WSG-FR-PDMINR 71 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT-----CCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTEE--EES-CC-HHHHGG
T ss_pred EEEEcCCCChhHHHHHHHHHHCC-----CCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCEE--Eec-CC-HHHHHH
Confidence 67899999999999999988742 335566666 344443 58999999983 36643 223 33 335666
Q ss_pred HHhh
Q psy160 184 WLIT 187 (346)
Q Consensus 184 fi~~ 187 (346)
++.+
T Consensus 72 ~l~~ 75 (81)
T 1h75_A 72 LHPA 75 (81)
T ss_dssp GSCC
T ss_pred HHhc
Confidence 6543
No 402
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.86 E-value=4.1e-05 Score=60.65 Aligned_cols=66 Identities=11% Similarity=0.142 Sum_probs=49.0
Q ss_pred CHHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-C---h----hhHHhhCCCCcceEEEEe
Q psy160 93 NRRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-D---P----RYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 93 ~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~---~----~l~~~~~i~~~Ptl~~~~ 164 (346)
..+.+++++.+.. ++.|+++||++|+++.+.+.++.. .+..+.++ . + .+++.+|+.++|+++ .
T Consensus 38 ~~~~~~~~i~~~~--Vvvf~~~~Cp~C~~~k~~L~~~~i-----~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i 108 (146)
T 2ht9_A 38 PVNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMNV-----NYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 108 (146)
T ss_dssp CHHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--E
T ss_pred HHHHHHHHhcCCC--EEEEECCCChhHHHHHHHHHHcCC-----CeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--E
Confidence 3567777777653 445999999999999999988753 35556665 2 2 378899999999984 3
Q ss_pred cCC
Q psy160 165 HRF 167 (346)
Q Consensus 165 ~g~ 167 (346)
+|+
T Consensus 109 ~G~ 111 (146)
T 2ht9_A 109 NGT 111 (146)
T ss_dssp TTE
T ss_pred CCE
Confidence 664
No 403
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.85 E-value=3e-05 Score=66.98 Aligned_cols=70 Identities=14% Similarity=0.229 Sum_probs=51.8
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE----------------------------------------
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---------------------------------------- 248 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---------------------------------------- 248 (346)
.+..++.|+++||++|+++.+.+.++.+. + ++.+..+
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 45689999999999999999999887664 2 4554432
Q ss_pred -------------cChhhhhhCCCccccEEEEEe-CCeEEEeecCcc
Q psy160 249 -------------QDPQLAKRYSIKTFPALVYFR-NGNPLIFEGENK 281 (346)
Q Consensus 249 -------------~~~~~~~~~~i~~~Pti~~~~-~g~~~~y~g~~~ 281 (346)
.+..+++++||+++||+++.. +|+.....|..+
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~ 220 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPD 220 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCC
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCC
Confidence 123356788999999999987 476545677654
No 404
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.83 E-value=3.5e-05 Score=65.50 Aligned_cols=71 Identities=17% Similarity=0.301 Sum_probs=55.8
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhhh
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 256 (346)
.++++|.|| ++||++|....+.+.++.+++++.++.++.| + +..+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 478999999 9999999999999999999986445776666 1 2357888
Q ss_pred CCCc------cccEEEEE-eCCeEEE-eecC
Q psy160 257 YSIK------TFPALVYF-RNGNPLI-FEGE 279 (346)
Q Consensus 257 ~~i~------~~Pti~~~-~~g~~~~-y~g~ 279 (346)
|++. .+|+++++ ++|+.+. +.|.
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~ 166 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVND 166 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecC
Confidence 9998 99999999 5776432 3444
No 405
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.83 E-value=5.3e-05 Score=64.50 Aligned_cols=73 Identities=16% Similarity=0.335 Sum_probs=56.1
Q ss_pred ccceEEEEEEc-CCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhh
Q psy160 208 ETQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAK 255 (346)
Q Consensus 208 ~~~~~lv~F~~-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~ 255 (346)
..++++|.||+ .||++|....|.+.++.+++++.++.++.| + +..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 35789999996 999999999999999999997546777776 1 124677
Q ss_pred hCCCc------cccEEEEE-eCCeEE-EeecCc
Q psy160 256 RYSIK------TFPALVYF-RNGNPL-IFEGEN 280 (346)
Q Consensus 256 ~~~i~------~~Pti~~~-~~g~~~-~y~g~~ 280 (346)
.|++. .+|+.+++ ++|+.+ .+.|..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~ 180 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDK 180 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECT
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCC
Confidence 88988 89999888 577643 344543
No 406
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.82 E-value=1.9e-05 Score=56.75 Aligned_cols=67 Identities=13% Similarity=0.245 Sum_probs=44.2
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC---ChHHHHhc-CCCCCCeEEEEeCCceeeecCCCCCHHHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKIS---DTEAAAKY-NIINLPSLVYFRKQVPLLYDGDLFDEEKILTW 76 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~~c~~~-~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~~ 76 (346)
+.|+++||++|+++.+.|++..-. +..+.++ ..++...+ ++.+.|+++ .+|..+ |+ .+++.++
T Consensus 9 ~~y~~~~C~~C~~~~~~L~~~~i~-----~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~i---~g---~~~i~~~ 75 (89)
T 2klx_A 9 ILYTRPNCPYCKRARDLLDKKGVK-----YTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYHV---GG---CDDLYAL 75 (89)
T ss_dssp EEESCSCCTTTHHHHHHHHHHTCC-----EEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEEC---CS---HHHHHHH
T ss_pred EEEECCCChhHHHHHHHHHHcCCC-----cEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEEE---eC---hHHHHHH
Confidence 368999999999999888765322 2233344 24677788 999999974 466542 22 2466666
Q ss_pred Hhcc
Q psy160 77 LTSQ 80 (346)
Q Consensus 77 i~~~ 80 (346)
+.+.
T Consensus 76 ~~~g 79 (89)
T 2klx_A 76 ENKG 79 (89)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 5543
No 407
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.81 E-value=0.00018 Score=56.91 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=74.9
Q ss_pred HhccCCccccCceeecCHHHHHHHHhcCCcEEEE-EECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC-----hhhHH
Q psy160 77 LTSQDVFEIKNEIEEVNRRMLDKLLEENEFVTVF-FYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD-----PRYAR 150 (346)
Q Consensus 77 i~~~~~p~~~~~v~~l~~~~~~~~~~~~~~~lv~-F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~-----~~l~~ 150 (346)
+.++..| .|.++|.++..++..+.-+..++ |..+.-..-..+.+.+.++|+.+++ ++.|+.+|. ..+..
T Consensus 8 ~~~~~~P----LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg-ki~Fv~vd~~~~~~~~~l~ 82 (147)
T 3bj5_A 8 MKHNQLP----LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFAFIDSDHTDNQRILE 82 (147)
T ss_dssp -----------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT-TCEEEEECTTCGGGHHHHH
T ss_pred hhhccCC----eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC-ceEEEEEecchHhHHHHHH
Confidence 3456778 99999999999998776555444 5544444567889999999999976 388888774 34678
Q ss_pred hhCCCC--cceEEEEec-CC--cceec-CCcchhHHHHHHHhhccc
Q psy160 151 KWGVTK--LPAVVYFRH-RF--PSIYR-GDLSEEEEVLQWLITQKT 190 (346)
Q Consensus 151 ~~~i~~--~Ptl~~~~~-g~--~~~y~-g~~~~~~~i~~fi~~~~~ 190 (346)
.||+.. .|+++++.. +. .+.+. +..+ .+.|.+|+.+...
T Consensus 83 ~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t-~~~i~~Fv~d~l~ 127 (147)
T 3bj5_A 83 FFGLKKEECPAVRLITLEEEMTKYKPESEELT-AERITEFCHRFLE 127 (147)
T ss_dssp HTTCCGGGCSEEEEEECSSSCEEECCSCCCCC-HHHHHHHHHHHHT
T ss_pred HcCCCcccCCEEEEEecccccccCCCCcccCC-HHHHHHHHHHHHc
Confidence 999986 899999875 33 33443 6676 4489999988543
No 408
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.78 E-value=4.8e-05 Score=64.33 Aligned_cols=65 Identities=22% Similarity=0.402 Sum_probs=52.0
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhhh
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 256 (346)
.++++|.|| ++||++|....|.+.++++++++.++.++.| + +..+++.
T Consensus 52 gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 131 (213)
T 2i81_A 52 KKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKD 131 (213)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHH
Confidence 468999999 9999999999999999999986445666665 1 2457888
Q ss_pred CCCc-----cccEEEEE-eCCeE
Q psy160 257 YSIK-----TFPALVYF-RNGNP 273 (346)
Q Consensus 257 ~~i~-----~~Pti~~~-~~g~~ 273 (346)
|++. ..|+++++ ++|+.
T Consensus 132 ygv~~~~g~~~p~~~lID~~G~i 154 (213)
T 2i81_A 132 YNVLFDDSVSLRAFVLIDMNGIV 154 (213)
T ss_dssp TTCEETTTEECEEEEEECTTSBE
T ss_pred hCCccccCCcccEEEEECCCCEE
Confidence 9998 89988888 46764
No 409
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.78 E-value=4.7e-05 Score=57.95 Aligned_cols=68 Identities=13% Similarity=0.124 Sum_probs=46.8
Q ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHH-HHHHHHHHhhccCCCcEEEEeC-C-------hhhHHhhCCCCcceEEEEe
Q psy160 94 RRMLDKLLEENEFVTVFFYETDHKDSVKV-LERLEKIDGETDNMDITFVKMA-D-------PRYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 94 ~~~~~~~~~~~~~~lv~F~~~~C~~c~~~-~~~~~~~a~~~~~~~i~~~~~~-~-------~~l~~~~~i~~~Ptl~~~~ 164 (346)
.+.+++++...+ ++.|+++||++|+++ .+.+.+... ....+..+.++ . ..+.+.+|+.++|++ |.
T Consensus 15 ~~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~--~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi 88 (118)
T 3c1r_A 15 IKHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV--PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YI 88 (118)
T ss_dssp HHHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC--CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC--CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 456667776654 567999999999998 887766541 11234455555 2 258889999999987 44
Q ss_pred cCC
Q psy160 165 HRF 167 (346)
Q Consensus 165 ~g~ 167 (346)
+|+
T Consensus 89 ~g~ 91 (118)
T 3c1r_A 89 NGK 91 (118)
T ss_dssp TTE
T ss_pred CCE
Confidence 665
No 410
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.78 E-value=8.3e-05 Score=61.59 Aligned_cols=38 Identities=11% Similarity=0.085 Sum_probs=31.1
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEE
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFV 141 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~ 141 (346)
++++.++.|+++||++|.++.|.+.++.+.+.. ++.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~ 61 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFV 61 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEE
Confidence 456789999999999999999999999888743 34443
No 411
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.78 E-value=8.5e-05 Score=59.90 Aligned_cols=85 Identities=7% Similarity=0.027 Sum_probs=56.1
Q ss_pred cCCcEEEEEECCC-ChhHHHHHHHHHHHHhhccCCCcEEEEeC------------------------ChhhHHhhCCCC-
Q psy160 103 ENEFVTVFFYETD-HKDSVKVLERLEKIDGETDNMDITFVKMA------------------------DPRYARKWGVTK- 156 (346)
Q Consensus 103 ~~~~~lv~F~~~~-C~~c~~~~~~~~~~a~~~~~~~i~~~~~~------------------------~~~l~~~~~i~~- 156 (346)
.+++++|.|+++| |++|....|.+.++++++.+..+..+.+| ...+++.|++..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 4578999999999 99999999999999988733222222222 235778888876
Q ss_pred -----cceEEEEe-cCC-cceecCC----cchhHHHHHHHhh
Q psy160 157 -----LPAVVYFR-HRF-PSIYRGD----LSEEEEVLQWLIT 187 (346)
Q Consensus 157 -----~Ptl~~~~-~g~-~~~y~g~----~~~~~~i~~fi~~ 187 (346)
.|+.+++. +|+ ...+.|. ....+++++.+++
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ 164 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKA 164 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 48888875 465 3334332 1112366666654
No 412
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.77 E-value=5.1e-05 Score=58.83 Aligned_cols=68 Identities=19% Similarity=0.333 Sum_probs=47.6
Q ss_pred cHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc-C---h----hhhhhCCCccccEEEEEe
Q psy160 198 TRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ-D---P----QLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 198 ~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~-~---~----~~~~~~~i~~~Pti~~~~ 269 (346)
..+.++++++.+. ++.|+++||++|+.+.+.+.+++- .+....++ + + .+.+.+++.++|++ |.
T Consensus 16 ~~~~~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~i-----~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l--~i 86 (130)
T 2cq9_A 16 PVNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMNV-----NYKVVELDLLEYGNQFQDALYKMTGERTVPRI--FV 86 (130)
T ss_dssp HHHHHHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHTC-----CCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE--EE
T ss_pred HHHHHHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcCC-----CcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE--EE
Confidence 3455666666553 344999999999999999998753 33445552 2 3 27788999999998 34
Q ss_pred CCeEE
Q psy160 270 NGNPL 274 (346)
Q Consensus 270 ~g~~~ 274 (346)
+|+.+
T Consensus 87 ~G~~i 91 (130)
T 2cq9_A 87 NGTFI 91 (130)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 78754
No 413
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.77 E-value=7.5e-05 Score=56.21 Aligned_cols=65 Identities=20% Similarity=0.266 Sum_probs=46.1
Q ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC-----hh----hHHhhCCCCcceEEEEe
Q psy160 94 RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD-----PR----YARKWGVTKLPAVVYFR 164 (346)
Q Consensus 94 ~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~-----~~----l~~~~~i~~~Ptl~~~~ 164 (346)
.+.+++++.+++ ++.|+++||++|++..+.+.+..-. ...+.++. +. +.+..|...+|++ |.
T Consensus 9 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~i~-----~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi 79 (113)
T 3rhb_A 9 EESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRLGVQ-----PLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FV 79 (113)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHTTCC-----CEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHcCCC-----CeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 355666666655 6789999999999999999875433 45556542 22 5556799999998 44
Q ss_pred cCC
Q psy160 165 HRF 167 (346)
Q Consensus 165 ~g~ 167 (346)
+|+
T Consensus 80 ~g~ 82 (113)
T 3rhb_A 80 CGK 82 (113)
T ss_dssp TTE
T ss_pred CCE
Confidence 664
No 414
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.77 E-value=6.3e-05 Score=59.55 Aligned_cols=68 Identities=19% Similarity=0.343 Sum_probs=48.2
Q ss_pred cHHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc-C---h----hhhhhCCCccccEEEEEe
Q psy160 198 TRVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ-D---P----QLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 198 ~~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~-~---~----~~~~~~~i~~~Pti~~~~ 269 (346)
..+.++++++.+. + +.|+++||++|+.+.+.+.+++.. +....++ + + .+.+.+++.++|++ |.
T Consensus 38 ~~~~~~~~i~~~~-V-vvf~~~~Cp~C~~~k~~L~~~~i~-----~~~vdId~~~~~~~~~~~L~~~~g~~tvP~i--fi 108 (146)
T 2ht9_A 38 PVNQIQETISDNC-V-VIFSKTSCSYCTMAKKLFHDMNVN-----YKVVELDLLEYGNQFQDALYKMTGERTVPRI--FV 108 (146)
T ss_dssp CHHHHHHHHHHCS-E-EEEECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGCTTHHHHHHHHHHHHSCCCSCEE--EE
T ss_pred HHHHHHHHhcCCC-E-EEEECCCChhHHHHHHHHHHcCCC-----eEEEECccCcCCHHHHHHHHHHhCCCCcCeE--EE
Confidence 3456677776653 3 449999999999999999988533 3445552 2 3 37788999999998 45
Q ss_pred CCeEE
Q psy160 270 NGNPL 274 (346)
Q Consensus 270 ~g~~~ 274 (346)
+|+.+
T Consensus 109 ~G~~i 113 (146)
T 2ht9_A 109 NGTFI 113 (146)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 78754
No 415
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.76 E-value=5.3e-05 Score=60.80 Aligned_cols=65 Identities=15% Similarity=0.259 Sum_probs=50.5
Q ss_pred cceEEEEEEc-CCChhhHHHHHHHHHHHhhcCcCceEEEEE------------------------cChhhhhhCCCcc--
Q psy160 209 TQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI------------------------QDPQLAKRYSIKT-- 261 (346)
Q Consensus 209 ~~~~lv~F~~-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i------------------------~~~~~~~~~~i~~-- 261 (346)
.++++|.||+ .||++|....|.+.++.+++++.++.++.| .+..+++.|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4588999998 999999999999999999887545666665 1235667788766
Q ss_pred ----------ccEEEEEe-CCeE
Q psy160 262 ----------FPALVYFR-NGNP 273 (346)
Q Consensus 262 ----------~Pti~~~~-~g~~ 273 (346)
.|+.+++. +|+.
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i 137 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQV 137 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCE
T ss_pred ccccccccCcceEEEEECCCCeE
Confidence 79888884 6664
No 416
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.76 E-value=9.1e-05 Score=51.89 Aligned_cols=54 Identities=13% Similarity=0.409 Sum_probs=38.5
Q ss_pred EEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cChhhhh---hCCCccccEEEEEeCCeE
Q psy160 213 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQLAK---RYSIKTFPALVYFRNGNP 273 (346)
Q Consensus 213 lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~~~---~~~i~~~Pti~~~~~g~~ 273 (346)
++.|+++||++|+.+.+.++++. ..+....+ .++++.+ ++++.++|++ +.+|+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~~-----i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~ 60 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENRG-----FDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS 60 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT-----CCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE
T ss_pred EEEEcCCCChhHHHHHHHHHHCC-----CCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE
Confidence 56799999999999999988753 23344444 3444433 5899999998 457764
No 417
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.74 E-value=3.2e-05 Score=58.45 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=46.0
Q ss_pred HHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-C-------hhhHHhhCCCCcceEEEEecC
Q psy160 95 RMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-D-------PRYARKWGVTKLPAVVYFRHR 166 (346)
Q Consensus 95 ~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~-------~~l~~~~~i~~~Ptl~~~~~g 166 (346)
+.+++++.+ ..++.|+++||++|+++.+.+.++.... . .+..+.++ . ..+.+.+|+.++|++++ +|
T Consensus 10 ~~~~~~i~~--~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~-~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g 83 (114)
T 2hze_A 10 EFVQQRLAN--NKVTIFVKYTCPFCRNALDILNKFSFKR-G-AYEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GK 83 (114)
T ss_dssp HHHHTTCCT--TCEEEEECTTCHHHHHHHHHHTTSCBCT-T-SEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TT
T ss_pred HHHHHHhcc--CCEEEEEeCCChhHHHHHHHHHHcCCCc-C-ceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CC
Confidence 334444433 3578899999999999999887754331 1 15556665 2 26888999999999743 66
Q ss_pred C
Q psy160 167 F 167 (346)
Q Consensus 167 ~ 167 (346)
+
T Consensus 84 ~ 84 (114)
T 2hze_A 84 T 84 (114)
T ss_dssp E
T ss_pred E
Confidence 4
No 418
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.74 E-value=2.9e-05 Score=58.67 Aligned_cols=59 Identities=20% Similarity=0.264 Sum_probs=43.4
Q ss_pred EEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cC-------hhhhhhCCCccccEEEEEeCCeEE
Q psy160 212 LAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QD-------PQLAKRYSIKTFPALVYFRNGNPL 274 (346)
Q Consensus 212 ~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~-------~~~~~~~~i~~~Pti~~~~~g~~~ 274 (346)
.++.|+++||++|+.+.+.+.+++... + .+....+ .+ ..+.+.+++.++|+++ .+|+.+
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~-~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~--i~g~~i 86 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR-G-AYEIVDIKEFKPENELRDYFEQITGGKTVPRIF--FGKTSI 86 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT-T-SEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE--ETTEEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc-C-ceEEEEccCCCChHHHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 467799999999999999998876442 2 2555555 33 2678889999999874 378754
No 419
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.74 E-value=0.00014 Score=60.36 Aligned_cols=33 Identities=6% Similarity=0.082 Sum_probs=29.1
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDN 135 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~ 135 (346)
.+++.++.|+++||++|+++.|.+.++.+.+.+
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~ 56 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ 56 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC
Confidence 357789999999999999999999999888743
No 420
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.74 E-value=5.4e-05 Score=62.52 Aligned_cols=35 Identities=11% Similarity=0.192 Sum_probs=30.8
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEc
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKI 35 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 35 (346)
|.||++||++|+..+|.|.++++.+++.|+.++.+
T Consensus 51 v~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 85 (187)
T 3dwv_A 51 IYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 85 (187)
T ss_dssp EEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEE
T ss_pred EEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEE
Confidence 57999999999999999999999997777777654
No 421
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.71 E-value=0.00013 Score=50.13 Aligned_cols=54 Identities=17% Similarity=0.320 Sum_probs=39.4
Q ss_pred EEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cChhhhh---hCCCccccEEEEEeCCeE
Q psy160 213 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQLAK---RYSIKTFPALVYFRNGNP 273 (346)
Q Consensus 213 lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~~~---~~~i~~~Pti~~~~~g~~ 273 (346)
++.|+++||++|+.+.+.++++. ..+....+ .+++..+ ++++.++|+++. +|+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~-----i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~ 60 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRAG-----LAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH 60 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT-----CCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE
T ss_pred EEEEeCCCChHHHHHHHHHHHcC-----CCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE
Confidence 56789999999999999998763 23444455 3444444 799999999873 7764
No 422
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.70 E-value=0.00012 Score=52.76 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=48.8
Q ss_pred EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC------C----hhhHHhhCCCCcceEEEEecCCcceecCCcch
Q psy160 108 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA------D----PRYARKWGVTKLPAVVYFRHRFPSIYRGDLSE 177 (346)
Q Consensus 108 lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~------~----~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~ 177 (346)
++.|+++||++|++..+.++++.-. +..+.++ . ..+.+.+++.++|++.+ +|+. ..| .+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~-----~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~--i~G-~~- 82 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVD-----FEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH--VLG-YN- 82 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE--EES-CC-
T ss_pred EEEEECCCChHHHHHHHHHHHcCCC-----cEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE--EeC-CC-
Confidence 6789999999999999998886533 4555655 1 55677899999999987 5532 223 34
Q ss_pred hHHHHHHHh
Q psy160 178 EEEVLQWLI 186 (346)
Q Consensus 178 ~~~i~~fi~ 186 (346)
.+.|.+++.
T Consensus 83 ~~~l~~~l~ 91 (92)
T 3ic4_A 83 EEKLKELIR 91 (92)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 447777764
No 423
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.68 E-value=8.8e-05 Score=56.42 Aligned_cols=69 Identities=16% Similarity=0.278 Sum_probs=46.3
Q ss_pred HHHHHHHhccceEEEEEEcCCChhhHHH-HHHHHHHHhhcCcCceEEEEE-cC-------hhhhhhCCCccccEEEEEeC
Q psy160 200 VMLETMVEETQYLAVYFYKLNCNICDQI-LEGLEKVDDECDIYGIHMVKI-QD-------PQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 200 ~~~~~~~~~~~~~lv~F~~~~c~~c~~~-~~~~~~la~~~~~~~i~~~~i-~~-------~~~~~~~~i~~~Pti~~~~~ 270 (346)
+.++++++..+ ++.|+++||++|+.+ .+.+.+++. ....+....+ .+ ..+.+.+++.++|++ |.+
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~--~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~ 89 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV--PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YIN 89 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC--CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC--CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 34455555443 556999999999998 888877652 1113444455 22 257888999999986 668
Q ss_pred CeEE
Q psy160 271 GNPL 274 (346)
Q Consensus 271 g~~~ 274 (346)
|+.+
T Consensus 90 g~~i 93 (118)
T 3c1r_A 90 GKHI 93 (118)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 8754
No 424
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.67 E-value=7.4e-05 Score=60.52 Aligned_cols=40 Identities=10% Similarity=0.123 Sum_probs=32.2
Q ss_pred cCCcEEEEEECCCCh-hHHHHHHHHHHHHhhccCC--CcEEEE
Q psy160 103 ENEFVTVFFYETDHK-DSVKVLERLEKIDGETDNM--DITFVK 142 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~-~c~~~~~~~~~~a~~~~~~--~i~~~~ 142 (346)
.+++++|.|+++||+ +|....|.+.++.+.+... ++.++.
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~ 74 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIIS 74 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEE
Confidence 467899999999999 9999999999999888432 254444
No 425
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.67 E-value=5.9e-05 Score=61.81 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=36.5
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.||++||++|....|.+.++.+++++.++.++.+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 77 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAF 77 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEE
Confidence 35799999999999999999999999999998756887777
No 426
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.66 E-value=5.9e-05 Score=61.55 Aligned_cols=64 Identities=11% Similarity=0.159 Sum_probs=47.8
Q ss_pred cCCcEEEEEECCC-ChhHHHHHHHHHHHHhhccCCCcEEEEeC-----------------------ChhhHHhhCCCCc-
Q psy160 103 ENEFVTVFFYETD-HKDSVKVLERLEKIDGETDNMDITFVKMA-----------------------DPRYARKWGVTKL- 157 (346)
Q Consensus 103 ~~~~~lv~F~~~~-C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-----------------------~~~l~~~~~i~~~- 157 (346)
.+++++|.||+.| |++|...+|.+.+++++ .+..+..+.+| ...+++.|++...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 3578999999999 99999999999999887 44333333332 2468889999877
Q ss_pred --------ceEEEEe-cCC
Q psy160 158 --------PAVVYFR-HRF 167 (346)
Q Consensus 158 --------Ptl~~~~-~g~ 167 (346)
|+.+++. +|+
T Consensus 122 ~~~~g~~~p~~~lid~~G~ 140 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGADGN 140 (175)
T ss_dssp STTTTSBCSEEEEECTTSB
T ss_pred cccCCcccceEEEECCCCe
Confidence 7777775 566
No 427
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.65 E-value=0.00014 Score=53.96 Aligned_cols=65 Identities=14% Similarity=0.148 Sum_probs=45.3
Q ss_pred HHHHHHHHhcCCcEEEEEEC-----CCChhHHHHHHHHHHHHhhccCCCcEEEEeC-Chh----hHHhhCCCCcceEEEE
Q psy160 94 RRMLDKLLEENEFVTVFFYE-----TDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPR----YARKWGVTKLPAVVYF 163 (346)
Q Consensus 94 ~~~~~~~~~~~~~~lv~F~~-----~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~----l~~~~~i~~~Ptl~~~ 163 (346)
.+.+++++.+++ ++.|++ +||++|+++.+.+.+.. ..+..+.++ ++. +...+|+.++|+++
T Consensus 7 ~~~~~~~i~~~~--vvvf~~g~~~~~~C~~C~~~~~~L~~~~-----i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~-- 77 (105)
T 2yan_A 7 EERLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNSTG-----VEYETFDILEDEEVRQGLKAYSNWPTYPQLY-- 77 (105)
T ss_dssp HHHHHHHHTSSS--EEEEESBCSSSBCTTHHHHHHHHHHHHT-----CCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--
T ss_pred HHHHHHHhccCC--EEEEEecCCCCCCCccHHHHHHHHHHCC-----CCeEEEECCCCHHHHHHHHHHHCCCCCCeEE--
Confidence 356677776554 445777 99999999999998764 235555655 333 56678999999983
Q ss_pred ecCC
Q psy160 164 RHRF 167 (346)
Q Consensus 164 ~~g~ 167 (346)
.+|+
T Consensus 78 i~g~ 81 (105)
T 2yan_A 78 VKGE 81 (105)
T ss_dssp ETTE
T ss_pred ECCE
Confidence 4664
No 428
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.61 E-value=0.0001 Score=58.37 Aligned_cols=81 Identities=11% Similarity=0.194 Sum_probs=57.9
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEE----------------------------------------
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK---------------------------------------- 142 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~---------------------------------------- 142 (346)
+.+..++.|+.++|++|+++.+.+.++.+ + .+.+..
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l~~-v---~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~ 88 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKMTD-V---TVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGG 88 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTCCS-E---EEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhcCc-e---EEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCcc
Confidence 34678999999999999999999876421 1 111110
Q ss_pred --eC-----ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHHHhhcccc
Q psy160 143 --MA-----DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWLITQKTE 191 (346)
Q Consensus 143 --~~-----~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi~~~~~~ 191 (346)
++ +..+++++||+++||+++ .+|+ .+.|..+.+ .|.+.+.+....
T Consensus 89 ~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~--~i~G~~~~~-~l~~~i~~~~~~ 140 (147)
T 3gv1_A 89 SICDNPVAETTSLGEQFGFNGTPTLVF-PNGR--TQSGYSPMP-QLEEIIRKNQQE 140 (147)
T ss_dssp CCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC--EEESCCCTT-HHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE--EeeCCCCHH-HHHHHHHHHHHh
Confidence 00 446788999999999998 5675 467877745 888888776543
No 429
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.60 E-value=0.00018 Score=53.42 Aligned_cols=66 Identities=24% Similarity=0.415 Sum_probs=44.7
Q ss_pred HHHHHHHhccceEEEEEEc-----CCChhhHHHHHHHHHHHhhcCcCceEEEEE-cChh----hhhhCCCccccEEEEEe
Q psy160 200 VMLETMVEETQYLAVYFYK-----LNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQ----LAKRYSIKTFPALVYFR 269 (346)
Q Consensus 200 ~~~~~~~~~~~~~lv~F~~-----~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~----~~~~~~i~~~Pti~~~~ 269 (346)
+.++++++.++ ++ .|++ +||++|+.+.+.+.+++- .+....+ .++. +.+.+++.++|++ |.
T Consensus 8 ~~~~~~i~~~~-vv-vf~~g~~~~~~C~~C~~~~~~L~~~~i-----~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~i 78 (105)
T 2yan_A 8 ERLKVLTNKAS-VM-LFMKGNKQEAKCGFSKQILEILNSTGV-----EYETFDILEDEEVRQGLKAYSNWPTYPQL--YV 78 (105)
T ss_dssp HHHHHHHTSSS-EE-EEESBCSSSBCTTHHHHHHHHHHHHTC-----CCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EE
T ss_pred HHHHHHhccCC-EE-EEEecCCCCCCCccHHHHHHHHHHCCC-----CeEEEECCCCHHHHHHHHHHHCCCCCCeE--EE
Confidence 45566666554 33 4777 999999999999988742 2334444 3444 4556789999998 56
Q ss_pred CCeEE
Q psy160 270 NGNPL 274 (346)
Q Consensus 270 ~g~~~ 274 (346)
+|+.+
T Consensus 79 ~g~~i 83 (105)
T 2yan_A 79 KGELV 83 (105)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88753
No 430
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.59 E-value=0.0002 Score=57.95 Aligned_cols=39 Identities=8% Similarity=-0.023 Sum_probs=31.1
Q ss_pred ceEEEEEE-cCCChhhHH-HHHHHHHHHhhcCcCce-EEEEE
Q psy160 210 QYLAVYFY-KLNCNICDQ-ILEGLEKVDDECDIYGI-HMVKI 248 (346)
Q Consensus 210 ~~~lv~F~-~~~c~~c~~-~~~~~~~la~~~~~~~i-~~~~i 248 (346)
++++|.|| +.||++|.. ..|.+.++.+++++.++ .++.|
T Consensus 32 k~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~I 73 (167)
T 2wfc_A 32 KKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACM 73 (167)
T ss_dssp SEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEE
T ss_pred CcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 46777776 999999999 99999999888864456 66666
No 431
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.57 E-value=0.00027 Score=57.82 Aligned_cols=64 Identities=13% Similarity=0.246 Sum_probs=47.5
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C----------------------ChhhHHhhCCCC--
Q psy160 104 NEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A----------------------DPRYARKWGVTK-- 156 (346)
Q Consensus 104 ~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~----------------------~~~l~~~~~i~~-- 156 (346)
+++++|.|| +.||+.|...+|.+.++.++++..++.++.+ | ...+++.|++..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 467788887 9999999999999999999986555555432 2 446777888753
Q ss_pred ----------cceEEEEe-cCC
Q psy160 157 ----------LPAVVYFR-HRF 167 (346)
Q Consensus 157 ----------~Ptl~~~~-~g~ 167 (346)
.|+.+++. +|+
T Consensus 131 ~~~g~~~~~~~p~~~lID~~G~ 152 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGPTHR 152 (179)
T ss_dssp CCC--CEEEECCEEEEECTTSB
T ss_pred cccCcccCCcceEEEEECCCCE
Confidence 47777775 465
No 432
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.57 E-value=2.9e-05 Score=55.77 Aligned_cols=54 Identities=9% Similarity=0.195 Sum_probs=40.2
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---ChhhHHhh-CCCCcceEEEEecCC
Q psy160 107 VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---DPRYARKW-GVTKLPAVVYFRHRF 167 (346)
Q Consensus 107 ~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~~~l~~~~-~i~~~Ptl~~~~~g~ 167 (346)
-++.|+++||++|+++.+.+++..-. +..+.++ ...+.+.+ ++.++|++.+ +|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~i~-----~~~vdv~~~~~~~l~~~~~~~~~vP~l~~--~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKGVK-----YTDIDASTSLRQEMVQRANGRNTFPQIFI--GDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHTCC-----EEEECSCHHHHHHHHHHHHSSCCSCEEEE--TTE
T ss_pred eEEEEECCCChhHHHHHHHHHHcCCC-----cEEEECCHHHHHHHHHHhCCCCCcCEEEE--CCE
Confidence 37789999999999999999876432 3344444 34577888 9999999843 664
No 433
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.56 E-value=7.7e-05 Score=59.75 Aligned_cols=40 Identities=10% Similarity=0.171 Sum_probs=27.2
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEE
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK 142 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~ 142 (346)
.++++++.|| +.||+.|...+|.+.++.++++..++.++.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~ 69 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLG 69 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEee
Confidence 4578889998 999999999999999999888666665554
No 434
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.54 E-value=0.00023 Score=58.84 Aligned_cols=40 Identities=13% Similarity=0.281 Sum_probs=33.6
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
+.++.++.|+++||++|..+.|.+.++.+++.+ ++.|..+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRL 63 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEE
Confidence 356789999999999999999999999999875 6666533
No 435
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.53 E-value=0.0002 Score=53.84 Aligned_cols=66 Identities=21% Similarity=0.412 Sum_probs=45.2
Q ss_pred HHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEcC-----hh----hhhhCCCccccEEEEEeC
Q psy160 200 VMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQD-----PQ----LAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 200 ~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~-----~~----~~~~~~i~~~Pti~~~~~ 270 (346)
+.++++++.++ ++.|+++||++|+.+.+.+.+++-. .....++. ++ +.+..|..++|++ |.+
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~i~-----~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~ 80 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRLGVQ-----PLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVC 80 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHTTCC-----CEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHcCCC-----CeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 34455666655 5669999999999999999887543 33444421 22 4455688999998 568
Q ss_pred CeEE
Q psy160 271 GNPL 274 (346)
Q Consensus 271 g~~~ 274 (346)
|+.+
T Consensus 81 g~~i 84 (113)
T 3rhb_A 81 GKHI 84 (113)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 8754
No 436
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.51 E-value=0.00023 Score=58.60 Aligned_cols=85 Identities=13% Similarity=0.139 Sum_probs=54.5
Q ss_pred cCCcEEEEEEC-CCChhHHHHHHHHHHHHhhccCCCcEEEEe--C--------------------------ChhhHHhhC
Q psy160 103 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFVKM--A--------------------------DPRYARKWG 153 (346)
Q Consensus 103 ~~~~~lv~F~~-~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~--------------------------~~~l~~~~~ 153 (346)
.+++++|.||+ .||+.|...+|.+.++.++++..++.++.+ | ...+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 35788999995 899999999999999988875434444332 2 234566777
Q ss_pred CC------CcceEEEEe-cCC-cceecCCcc---hhHHHHHHHhh
Q psy160 154 VT------KLPAVVYFR-HRF-PSIYRGDLS---EEEEVLQWLIT 187 (346)
Q Consensus 154 i~------~~Ptl~~~~-~g~-~~~y~g~~~---~~~~i~~fi~~ 187 (346)
+. ..|+.+++. +|+ ...+.|... ..+++++.++.
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~ 153 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKA 153 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 76 258888885 455 233444321 13356666554
No 437
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.51 E-value=3.7e-05 Score=55.52 Aligned_cols=66 Identities=18% Similarity=0.258 Sum_probs=45.4
Q ss_pred eecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcC------C----hHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHH
Q psy160 2 YINDENCPECDDILEELEHIDGDADQYGIDMVKIS------D----TEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEE 71 (346)
Q Consensus 2 ~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~------~----~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~ 71 (346)
.|+++||++|+++.+.|+++.-. +..+.++ + .++...+++.+.|++++ +|.. -|..+. +
T Consensus 16 ly~~~~Cp~C~~~~~~L~~~gi~-----~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~---i~G~~~-~ 84 (92)
T 3ic4_A 16 MYGLSTCPHCKRTLEFLKREGVD-----FEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH---VLGYNE-E 84 (92)
T ss_dssp EEECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE---EESCCH-H
T ss_pred EEECCCChHHHHHHHHHHHcCCC-----cEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE---EeCCCH-H
Confidence 57899999999998888876432 3444554 1 56667899999999877 6643 233333 5
Q ss_pred HHHHHHh
Q psy160 72 KILTWLT 78 (346)
Q Consensus 72 ~i~~~i~ 78 (346)
.|.+++.
T Consensus 85 ~l~~~l~ 91 (92)
T 3ic4_A 85 KLKELIR 91 (92)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 7777764
No 438
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.51 E-value=3e-05 Score=62.71 Aligned_cols=47 Identities=11% Similarity=0.133 Sum_probs=36.7
Q ss_pred HHHHHHhcCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEE
Q psy160 96 MLDKLLEENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK 142 (346)
Q Consensus 96 ~~~~~~~~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~ 142 (346)
++.++..+++++++.|| +.||++|...+|.+.++.+++++.++.++.
T Consensus 25 ~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~ 72 (164)
T 4gqc_A 25 NLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLA 72 (164)
T ss_dssp EHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEE
T ss_pred EHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEE
Confidence 34556667788888888 999999999889999888888665555554
No 439
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.50 E-value=0.00031 Score=49.10 Aligned_cols=68 Identities=7% Similarity=0.099 Sum_probs=46.9
Q ss_pred EEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC-----hhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHH
Q psy160 108 TVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD-----PRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVL 182 (346)
Q Consensus 108 lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~-----~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~ 182 (346)
++.|+++||++|+++.+.+.+.. ..+..+.++. ..+.+.+++.++|++. .+|+.+ |.. ++|.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~-----i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i---~g~---~~i~ 69 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG-----VSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI---GGY---DDLY 69 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT-----CCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE---ESH---HHHH
T ss_pred EEEEECCCChhHHHHHHHHHHCC-----CCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE---eCH---HHHH
Confidence 67899999999999999888753 3355666652 2356789999999984 366422 222 2577
Q ss_pred HHHhhc
Q psy160 183 QWLITQ 188 (346)
Q Consensus 183 ~fi~~~ 188 (346)
+++.+.
T Consensus 70 ~~~~~g 75 (82)
T 1fov_A 70 ALDARG 75 (82)
T ss_dssp HHHHTT
T ss_pred HHHHCC
Confidence 776654
No 440
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.46 E-value=8.2e-05 Score=60.56 Aligned_cols=62 Identities=10% Similarity=0.224 Sum_probs=44.2
Q ss_pred HHHHHhccceEEEEEEcCCChhhHHH-HHHHHHHHhhcCcCceE-EEEE--cC----hhhhhhCCCc-ccc
Q psy160 202 LETMVEETQYLAVYFYKLNCNICDQI-LEGLEKVDDECDIYGIH-MVKI--QD----PQLAKRYSIK-TFP 263 (346)
Q Consensus 202 ~~~~~~~~~~~lv~F~~~~c~~c~~~-~~~~~~la~~~~~~~i~-~~~i--~~----~~~~~~~~i~-~~P 263 (346)
+.++++.++.+++.|++.||++|... .|.+.++.++++..++. ++.| +. ..+++++++. .||
T Consensus 37 l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp 107 (171)
T 2pwj_A 37 VNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIE 107 (171)
T ss_dssp HHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred HHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceE
Confidence 34444555577888999999999998 99999999888644566 6666 22 3456677763 566
No 441
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.46 E-value=5.6e-05 Score=53.09 Aligned_cols=68 Identities=13% Similarity=0.234 Sum_probs=45.7
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcCC-----hHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHH
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKISD-----TEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILT 75 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~-----~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~ 75 (346)
+.|+++||++|+++.+.+++.. ..+..+.++. .++...+++.+.|++. .+|..+ .| .++|.+
T Consensus 4 ~~y~~~~C~~C~~~~~~l~~~~-----i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i--~g----~~~i~~ 70 (82)
T 1fov_A 4 EIYTKETCPYCHRAKALLSSKG-----VSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI--GG----YDDLYA 70 (82)
T ss_dssp EEEECSSCHHHHHHHHHHHHHT-----CCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE--ES----HHHHHH
T ss_pred EEEECCCChhHHHHHHHHHHCC-----CCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE--eC----HHHHHH
Confidence 3688999999999988877642 2234455542 2456789999999984 466542 22 247888
Q ss_pred HHhccC
Q psy160 76 WLTSQD 81 (346)
Q Consensus 76 ~i~~~~ 81 (346)
++.+..
T Consensus 71 ~~~~g~ 76 (82)
T 1fov_A 71 LDARGG 76 (82)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 876543
No 442
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.45 E-value=0.00027 Score=57.52 Aligned_cols=63 Identities=11% Similarity=0.290 Sum_probs=48.2
Q ss_pred cceEEEEEEcCC-ChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------ChhhhhhCCCccc
Q psy160 209 TQYLAVYFYKLN-CNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------DPQLAKRYSIKTF 262 (346)
Q Consensus 209 ~~~~lv~F~~~~-c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------~~~~~~~~~i~~~ 262 (346)
.++++|.||+.| |++|....|.+.++.++ . ++.++.| + +..+++.|++...
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 568999999999 99999999999999887 3 4555544 1 2457788998876
Q ss_pred ---------cEEEEE-eCCeEE
Q psy160 263 ---------PALVYF-RNGNPL 274 (346)
Q Consensus 263 ---------Pti~~~-~~g~~~ 274 (346)
|+.+++ ++|+.+
T Consensus 121 ~~~~~g~~~p~~~lid~~G~I~ 142 (175)
T 1xvq_A 121 DGPMAGLLARAIVVIGADGNVA 142 (175)
T ss_dssp SSTTTTSBCSEEEEECTTSBEE
T ss_pred ccccCCcccceEEEECCCCeEE
Confidence 777776 577743
No 443
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.45 E-value=0.00017 Score=58.10 Aligned_cols=38 Identities=8% Similarity=0.119 Sum_probs=32.6
Q ss_pred cceEEEEEEcCC-ChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFYKLN-CNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~~~~-c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.||++| |++|....|.+.++.+++ . ++.++.+
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-~~~vv~i 82 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-DVNVYTI 82 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-SCEEEEE
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-CCEEEEE
Confidence 568999999999 999999999999999988 3 5666665
No 444
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.45 E-value=0.00039 Score=50.99 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=40.1
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-ChhhHH----hh-CCCCcceEEEEecCC
Q psy160 105 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYAR----KW-GVTKLPAVVYFRHRF 167 (346)
Q Consensus 105 ~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~l~~----~~-~i~~~Ptl~~~~~g~ 167 (346)
+.-++.|+++||++|++..+.+.+..- .+..+.++ .+.... .. |...+|+++ .+|+
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~~i-----~y~~idI~~~~~~~~~l~~~~~g~~~vP~if--i~g~ 76 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRKGV-----EFQEYCIDGDNEAREAMAARANGKRSLPQIF--IDDQ 76 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHHTC-----CCEEEECTTCHHHHHHHHHHTTTCCCSCEEE--ETTE
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-----CCEEEEcCCCHHHHHHHHHHhCCCCCCCEEE--ECCE
Confidence 456789999999999999999987643 35556665 334333 33 899999883 4664
No 445
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.44 E-value=0.0002 Score=59.73 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=27.0
Q ss_pred CeecCCCChh-hHHHHHHHHHHHhhhcc---cCCeEEE
Q psy160 1 MYINDENCPE-CDDILEELEHIDGDADQ---YGIDMVK 34 (346)
Q Consensus 1 v~Fy~~~C~~-c~~~~~~~~~~a~~~~~---~~i~~~~ 34 (346)
|.|++.||++ |...+|.|.++.+.+.. .++.++.
T Consensus 46 v~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~ 83 (200)
T 2b7k_A 46 IYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLF 83 (200)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred EEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 5799999998 99999999999888743 2555543
No 446
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.43 E-value=0.0004 Score=56.74 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=33.6
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.|| +.||++|....|.+.++.+++++.++.++.|
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~V 91 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGV 91 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 457888888 9999999999999999999987656777666
No 447
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.41 E-value=0.00028 Score=54.56 Aligned_cols=69 Identities=9% Similarity=0.100 Sum_probs=48.6
Q ss_pred CHHHHHHHHhcCCcEEEEEECCCChhHHHH-HHHHHHHHhhccCCCcEEEEeCC--------hhhHHhhCCCCcceEEEE
Q psy160 93 NRRMLDKLLEENEFVTVFFYETDHKDSVKV-LERLEKIDGETDNMDITFVKMAD--------PRYARKWGVTKLPAVVYF 163 (346)
Q Consensus 93 ~~~~~~~~~~~~~~~lv~F~~~~C~~c~~~-~~~~~~~a~~~~~~~i~~~~~~~--------~~l~~~~~i~~~Ptl~~~ 163 (346)
..+.+++++...+ ++.|+++||++|++. .+.+.+.... ...+.++.++. ..+.+.+|...+|++ |
T Consensus 26 ~~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~--~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--f 99 (129)
T 3ctg_A 26 TVAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP--KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--Y 99 (129)
T ss_dssp HHHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC--GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--E
T ss_pred HHHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc--CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--E
Confidence 4566777777665 678999999999998 8777765421 12355666652 357888999999996 4
Q ss_pred ecCC
Q psy160 164 RHRF 167 (346)
Q Consensus 164 ~~g~ 167 (346)
.+|+
T Consensus 100 i~g~ 103 (129)
T 3ctg_A 100 INGK 103 (129)
T ss_dssp ETTE
T ss_pred ECCE
Confidence 4664
No 448
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.40 E-value=0.00025 Score=60.27 Aligned_cols=85 Identities=13% Similarity=0.199 Sum_probs=55.4
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEE--eC-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MA-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~~-----------------------------~~~l~~ 150 (346)
.+++++|.|| +.||+.|...+|.+.+++++++..++.++. +| ...+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 4578999999 999999999999999998887433333332 22 234677
Q ss_pred hhCC-----CCcceEEEEe-cCCc-ceecCCc---chhHHHHHHHhh
Q psy160 151 KWGV-----TKLPAVVYFR-HRFP-SIYRGDL---SEEEEVLQWLIT 187 (346)
Q Consensus 151 ~~~i-----~~~Ptl~~~~-~g~~-~~y~g~~---~~~~~i~~fi~~ 187 (346)
.|++ ...|+.+++. +|+. ..+.|.. ...+++++.++.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~ 181 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDS 181 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 7887 3678888885 4552 2233421 123366666654
No 449
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.39 E-value=0.00012 Score=58.55 Aligned_cols=40 Identities=10% Similarity=0.213 Sum_probs=27.7
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.|| +.||++|....|.+.++.++++..++.++.+
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~v 70 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGI 70 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEE
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccccCceEeee
Confidence 467888898 9999999999999999988887656666666
No 450
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.38 E-value=0.00022 Score=61.70 Aligned_cols=89 Identities=9% Similarity=0.122 Sum_probs=59.2
Q ss_pred HHHHhcCCc-EEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEE--eC----------------------------Ch
Q psy160 98 DKLLEENEF-VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVK--MA----------------------------DP 146 (346)
Q Consensus 98 ~~~~~~~~~-~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~~----------------------------~~ 146 (346)
.+++..++. +|+.|++.||+.|...++.+.++++++++.++.++. +| ..
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 344434453 455678999999999999999999998654455443 32 23
Q ss_pred hhHHhhCCC-------CcceEEEEe-cCCc-ceecCC----cchhHHHHHHHhh
Q psy160 147 RYARKWGVT-------KLPAVVYFR-HRFP-SIYRGD----LSEEEEVLQWLIT 187 (346)
Q Consensus 147 ~l~~~~~i~-------~~Ptl~~~~-~g~~-~~y~g~----~~~~~~i~~fi~~ 187 (346)
.+++.||+. .+|+++++. +|+. ..+.|. ++ .++++..+..
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~-~~Ellr~I~a 159 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRL-VDEILRIVKA 159 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCC-HHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccch-hHHHHHHHHH
Confidence 578899997 899988885 4652 222333 23 3467776654
No 451
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.38 E-value=0.00026 Score=57.24 Aligned_cols=41 Identities=12% Similarity=0.343 Sum_probs=33.8
Q ss_pred ccceEEEEEEcCCCh-hhHHHHHHHHHHHhhcCcC--ceEEEEE
Q psy160 208 ETQYLAVYFYKLNCN-ICDQILEGLEKVDDECDIY--GIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~-~c~~~~~~~~~la~~~~~~--~i~~~~i 248 (346)
..++++|.||++||+ +|....+.+.++.+++... ++.++.|
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~i 75 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISF 75 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEE
Confidence 357899999999999 9999999999998887643 2777766
No 452
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.37 E-value=0.00038 Score=59.12 Aligned_cols=65 Identities=17% Similarity=0.358 Sum_probs=48.5
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhhh
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 256 (346)
.++++|.|| +.||++|....|.+.++.++++..++.++.| + +..+++.
T Consensus 56 Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 135 (221)
T 2c0d_A 56 QKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKN 135 (221)
T ss_dssp TCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHHH
Confidence 468999999 9999999999999999988885435666555 1 1235566
Q ss_pred CCC-----ccccEEEEEe-CCeE
Q psy160 257 YSI-----KTFPALVYFR-NGNP 273 (346)
Q Consensus 257 ~~i-----~~~Pti~~~~-~g~~ 273 (346)
|++ ...|+.+++. +|+.
T Consensus 136 ygv~~~~g~~~P~~~lID~~G~I 158 (221)
T 2c0d_A 136 YNVLYDNSFALRGLFIIDKNGCV 158 (221)
T ss_dssp TTCEETTTEECEEEEEECTTSBE
T ss_pred cCCcccCCCccceEEEECCCCeE
Confidence 777 3679988885 6764
No 453
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.37 E-value=0.00061 Score=51.29 Aligned_cols=65 Identities=17% Similarity=0.278 Sum_probs=46.9
Q ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC--------hhhHHhhCCCCcceEEEEec
Q psy160 94 RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD--------PRYARKWGVTKLPAVVYFRH 165 (346)
Q Consensus 94 ~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~--------~~l~~~~~i~~~Ptl~~~~~ 165 (346)
.+.+++++++++ ++.|+++||++|.+..+.+.+..- ....+.++. ..+.+..|...+|++.+ +
T Consensus 7 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~~i-----~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~ 77 (114)
T 3h8q_A 7 RRHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSLGV-----ECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--N 77 (114)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHTTC-----CCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHcCC-----CcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--C
Confidence 466777776655 456999999999999988887532 355566652 23567789999999865 5
Q ss_pred CC
Q psy160 166 RF 167 (346)
Q Consensus 166 g~ 167 (346)
|+
T Consensus 78 g~ 79 (114)
T 3h8q_A 78 KV 79 (114)
T ss_dssp TE
T ss_pred CE
Confidence 64
No 454
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.34 E-value=0.00052 Score=49.29 Aligned_cols=54 Identities=9% Similarity=0.221 Sum_probs=39.4
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-Ch----hhHHhhCCCCcceEEEEecCC
Q psy160 107 VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DP----RYARKWGVTKLPAVVYFRHRF 167 (346)
Q Consensus 107 ~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~----~l~~~~~i~~~Ptl~~~~~g~ 167 (346)
-++.|+++||++|+++.+.+++.. ..+..+.++ ++ .+.+.+++.++|++ |.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~~-----i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARKG-----AEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT-----CCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHcC-----CCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 378899999999999998887753 335566665 22 35558899999976 34664
No 455
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.34 E-value=0.00015 Score=59.04 Aligned_cols=62 Identities=6% Similarity=0.090 Sum_probs=41.3
Q ss_pred HHHHHhcCCcEEEEEECCCChhHHHH-HHHHHHHHhhccCCCcE-EE--EeCC----hhhHHhhCCC-Ccc
Q psy160 97 LDKLLEENEFVTVFFYETDHKDSVKV-LERLEKIDGETDNMDIT-FV--KMAD----PRYARKWGVT-KLP 158 (346)
Q Consensus 97 ~~~~~~~~~~~lv~F~~~~C~~c~~~-~~~~~~~a~~~~~~~i~-~~--~~~~----~~l~~~~~i~-~~P 158 (346)
+.++++.++.+|+.|++.||+.|..- +|.+.+++++++..++. ++ ..|. ...++++++. .||
T Consensus 37 l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp 107 (171)
T 2pwj_A 37 VNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIE 107 (171)
T ss_dssp HHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred HHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceE
Confidence 33333333466778899999999998 99999999988544444 44 3442 3355666663 566
No 456
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.33 E-value=0.00051 Score=57.81 Aligned_cols=85 Identities=15% Similarity=0.217 Sum_probs=55.8
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------------~~~l~~ 150 (346)
.+++++|.|| +.||++|...+|.+.+++++++..++.++-+ | ...+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 3578999999 9999999999999999998885434444322 1 234667
Q ss_pred hhCCC------CcceEEEEe-cCCc-ceecCCcc---hhHHHHHHHhh
Q psy160 151 KWGVT------KLPAVVYFR-HRFP-SIYRGDLS---EEEEVLQWLIT 187 (346)
Q Consensus 151 ~~~i~------~~Ptl~~~~-~g~~-~~y~g~~~---~~~~i~~fi~~ 187 (346)
.|++. ..|+.+++. +|+. ..+.|... ..+++++.+..
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~ 174 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 174 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 78874 578888885 3552 22333321 13356666554
No 457
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.33 E-value=4.5e-05 Score=61.64 Aligned_cols=48 Identities=10% Similarity=0.173 Sum_probs=37.2
Q ss_pred HHHHHHhccceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 201 MLETMVEETQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 201 ~~~~~~~~~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
++.++....++++|.|| +.||++|....|.+.++.+++++.++.++.+
T Consensus 25 ~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~i 73 (164)
T 4gqc_A 25 NLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAI 73 (164)
T ss_dssp EHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEE
T ss_pred EHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEe
Confidence 34556666778888888 9999999988888888888887656666666
No 458
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.33 E-value=0.00017 Score=57.11 Aligned_cols=41 Identities=12% Similarity=0.181 Sum_probs=30.6
Q ss_pred ChHHHHhcCCCCCCeEEEEeCCceeeecCCCCCHHHHHHHHhccC
Q psy160 37 DTEAAAKYNIINLPSLVYFRKQVPLLYDGDLFDEEKILTWLTSQD 81 (346)
Q Consensus 37 ~~~~c~~~~i~~~Ptl~~f~~~~~~~y~G~~~~~~~i~~~i~~~~ 81 (346)
+.+++.++||++.||+++ .+|.. ..|.... +.+.++|.+..
T Consensus 98 ~~~la~~~gI~gtPt~vi-~nG~~--i~G~~~~-~~l~~~i~~~~ 138 (147)
T 3gv1_A 98 TTSLGEQFGFNGTPTLVF-PNGRT--QSGYSPM-PQLEEIIRKNQ 138 (147)
T ss_dssp HHHHHHHTTCCSSCEEEC-TTSCE--EESCCCT-THHHHHHHHTS
T ss_pred HHHHHHHhCCCccCEEEE-ECCEE--eeCCCCH-HHHHHHHHHHH
Confidence 457888999999999988 66653 5676666 47877776543
No 459
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.30 E-value=0.00035 Score=56.54 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=38.5
Q ss_pred cCCcEEEEEE-CCCChhHHH-HHHHHHHHHhhccCCCc-EEEEe--CC----hhhHHhhCCC-Ccc
Q psy160 103 ENEFVTVFFY-ETDHKDSVK-VLERLEKIDGETDNMDI-TFVKM--AD----PRYARKWGVT-KLP 158 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~-~~~~~~~~a~~~~~~~i-~~~~~--~~----~~l~~~~~i~-~~P 158 (346)
.++++++.|| +.||+.|.. -+|.+.+++++++..++ .++-+ |. ...++++++. .+|
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp 95 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQ 95 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceE
Confidence 3466777776 999999999 99999999988854455 55544 32 2345555554 255
No 460
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.28 E-value=0.00063 Score=57.27 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=33.5
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.|| +.||++|....|.+.++.++++..++.++.|
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~I 88 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVAC 88 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 468999999 9999999999999999998886445666655
No 461
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.28 E-value=0.00022 Score=58.71 Aligned_cols=47 Identities=13% Similarity=0.131 Sum_probs=33.7
Q ss_pred HHHHHhccceEEEEEEcCCChhhHH-HHHHHHHHHhhcCcCceE-EEEE
Q psy160 202 LETMVEETQYLAVYFYKLNCNICDQ-ILEGLEKVDDECDIYGIH-MVKI 248 (346)
Q Consensus 202 ~~~~~~~~~~~lv~F~~~~c~~c~~-~~~~~~~la~~~~~~~i~-~~~i 248 (346)
+.++++.+..+++.|++.||++|.. ..|.+.+++++++..++. ++.|
T Consensus 50 L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~I 98 (184)
T 3uma_A 50 TELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVV 98 (184)
T ss_dssp HHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEE
T ss_pred HHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 3443444445555566999999999 799999999988654565 6655
No 462
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.23 E-value=0.00078 Score=55.39 Aligned_cols=40 Identities=13% Similarity=0.245 Sum_probs=32.7
Q ss_pred cceEEEEEEc-CCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~~-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.||+ .||++|....|.+.++.+++++.++.++.|
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~I 70 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSV 70 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 4688999995 899999999999999988876445666655
No 463
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.19 E-value=0.0008 Score=49.57 Aligned_cols=71 Identities=11% Similarity=0.049 Sum_probs=46.2
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC------hhhH----HhhCCCCcceEEEEecCCcceecCC
Q psy160 105 EFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD------PRYA----RKWGVTKLPAVVYFRHRFPSIYRGD 174 (346)
Q Consensus 105 ~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~------~~l~----~~~~i~~~Ptl~~~~~g~~~~y~g~ 174 (346)
+.-+++|+++||++|++..+.+++.... +..+.++. ..+. +..++.++|++++ +|. .+-|.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~i~-----y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~--~~igg 91 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLGVD-----FDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE--KAIVG 91 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHTBC-----EEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT--EEEES
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCC-----cEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC--EEEEc
Confidence 4457889999999999999999887543 44455542 1222 2358999999876 331 23344
Q ss_pred cchhHHHHHHH
Q psy160 175 LSEEEEVLQWL 185 (346)
Q Consensus 175 ~~~~~~i~~fi 185 (346)
.+.+ .|.+++
T Consensus 92 ~~~~-~l~~~L 101 (103)
T 3nzn_A 92 FKEK-EIRESL 101 (103)
T ss_dssp CCHH-HHHHHT
T ss_pred CCHH-HHHHHh
Confidence 5533 666654
No 464
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.00044 Score=56.90 Aligned_cols=52 Identities=10% Similarity=-0.061 Sum_probs=34.4
Q ss_pred CCcE-EEEEECCCChhHHH-HHHHHHHHHhhccCCCcE-EE--EeCC----hhhHHhhCCC
Q psy160 104 NEFV-TVFFYETDHKDSVK-VLERLEKIDGETDNMDIT-FV--KMAD----PRYARKWGVT 155 (346)
Q Consensus 104 ~~~~-lv~F~~~~C~~c~~-~~~~~~~~a~~~~~~~i~-~~--~~~~----~~l~~~~~i~ 155 (346)
++++ |+.|.+.||+.|.. -+|.+.+++++++..++. ++ ..|. ...++++++.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~ 116 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGM 116 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCT
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCC
Confidence 3444 44555999999999 799999999998554444 44 3342 2344455554
No 465
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.19 E-value=0.00094 Score=57.41 Aligned_cols=65 Identities=20% Similarity=0.336 Sum_probs=50.2
Q ss_pred cceEEEEEEc-CCChhhHHHHHHHHHHHhhcCcCceEEEEE--c-----------------------------Chhhhhh
Q psy160 209 TQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI--Q-----------------------------DPQLAKR 256 (346)
Q Consensus 209 ~~~~lv~F~~-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~-----------------------------~~~~~~~ 256 (346)
.++++|.||+ .||++|....|.+.++.+++++.++.++.| + +..+++.
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 156 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKD 156 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHH
Confidence 4688999999 999999999999999999987556776666 1 1245667
Q ss_pred CCCc------cccEEEEEe-CCeE
Q psy160 257 YSIK------TFPALVYFR-NGNP 273 (346)
Q Consensus 257 ~~i~------~~Pti~~~~-~g~~ 273 (346)
|++. ..|+.+++. +|+.
T Consensus 157 ygv~~~~~g~~~p~~flID~~G~I 180 (240)
T 3qpm_A 157 YGVYLEDQGHTLRGLFIIDEKGVL 180 (240)
T ss_dssp TTCEETTTTEECEEEEEECTTSBE
T ss_pred hCCccccCCCccceEEEEcCCCeE
Confidence 7776 579988884 6663
No 466
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.17 E-value=0.00073 Score=49.51 Aligned_cols=58 Identities=19% Similarity=0.289 Sum_probs=40.4
Q ss_pred ceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cChhh----hhhC-CCccccEEEEEeCCeEE
Q psy160 210 QYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDPQL----AKRY-SIKTFPALVYFRNGNPL 274 (346)
Q Consensus 210 ~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~~~----~~~~-~i~~~Pti~~~~~g~~~ 274 (346)
+.-++.|+++||++|+++.+.+.+++-. +....+ .+++. .+.. +..++|++ |.+|+.+
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~~i~-----y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~i 78 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRKGVE-----FQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHI 78 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHHTCC-----CEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEE
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCC-----CEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEE
Confidence 4456779999999999999999987533 334455 33333 3344 88999987 5678644
No 467
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.16 E-value=0.00052 Score=55.47 Aligned_cols=53 Identities=9% Similarity=0.194 Sum_probs=37.7
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEE--eCCh----hhHHhhCCCCcc
Q psy160 104 NEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVK--MADP----RYARKWGVTKLP 158 (346)
Q Consensus 104 ~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~~~~----~l~~~~~i~~~P 158 (346)
+++++|.|| +.||+.|....|.+.++.+++ .++.++. .|.+ +.++++++..+|
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~ 106 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRFCESFNIQNVT 106 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHHHHTTCCSSE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHHHHHcCCCCeE
Confidence 467888898 799999999999999999887 3344443 3422 345566664455
No 468
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.15 E-value=0.00082 Score=51.85 Aligned_cols=70 Identities=13% Similarity=0.236 Sum_probs=48.1
Q ss_pred HHHHHHHHhccceEEEEEEcCCChhhHHH-HHHHHHHHhhcCcCceEEEEEc-C-------hhhhhhCCCccccEEEEEe
Q psy160 199 RVMLETMVEETQYLAVYFYKLNCNICDQI-LEGLEKVDDECDIYGIHMVKIQ-D-------PQLAKRYSIKTFPALVYFR 269 (346)
Q Consensus 199 ~~~~~~~~~~~~~~lv~F~~~~c~~c~~~-~~~~~~la~~~~~~~i~~~~i~-~-------~~~~~~~~i~~~Pti~~~~ 269 (346)
.+.+++++...+ ++.|+++||++|..+ .+.+.+++... ..+.+..++ + ..+.+.+|..++|++ |.
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~~--i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi 100 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVPK--SKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YI 100 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCCG--GGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCccC--CCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EE
Confidence 345555665554 567899999999999 88888775321 245566662 2 357778899999995 66
Q ss_pred CCeEE
Q psy160 270 NGNPL 274 (346)
Q Consensus 270 ~g~~~ 274 (346)
+|+.+
T Consensus 101 ~g~~i 105 (129)
T 3ctg_A 101 NGKHI 105 (129)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 78754
No 469
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.14 E-value=0.0014 Score=56.25 Aligned_cols=65 Identities=12% Similarity=0.204 Sum_probs=49.5
Q ss_pred cCCcEEEEEEC-CCChhHHHHHHHHHHHHhhccCCCcEEEEe--C-----------------------------ChhhHH
Q psy160 103 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFVKM--A-----------------------------DPRYAR 150 (346)
Q Consensus 103 ~~~~~lv~F~~-~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~--~-----------------------------~~~l~~ 150 (346)
.+++++|.||+ .||+.|...+|.+.+++++++..++.++.+ | ...+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 45788999998 999999999999999999986545544432 2 235777
Q ss_pred hhCCC------CcceEEEEe-cCC
Q psy160 151 KWGVT------KLPAVVYFR-HRF 167 (346)
Q Consensus 151 ~~~i~------~~Ptl~~~~-~g~ 167 (346)
.||+. ..|+.+++. +|+
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~ 179 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGV 179 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSB
T ss_pred HhCCccccCCCccceEEEEcCCCe
Confidence 88887 679888885 455
No 470
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.14 E-value=0.00057 Score=54.80 Aligned_cols=54 Identities=9% Similarity=0.015 Sum_probs=38.0
Q ss_pred cCCcEEEEEEC-CCChhHHHHHHHHHHHHhhccCCCcEEEE--eCC----hhhHHhhCCCCcc
Q psy160 103 ENEFVTVFFYE-TDHKDSVKVLERLEKIDGETDNMDITFVK--MAD----PRYARKWGVTKLP 158 (346)
Q Consensus 103 ~~~~~lv~F~~-~~C~~c~~~~~~~~~~a~~~~~~~i~~~~--~~~----~~l~~~~~i~~~P 158 (346)
.+++++|.||+ .||++|...+|.+.++.+++ .++.++. .|. ...++++++..+|
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~~~~~~~~~~~ 101 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRWCGAEGLDNAI 101 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHHHHHTCTTSE
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHHHHhcCCCCcE
Confidence 45688999985 99999999999999999887 3344444 342 2245566664455
No 471
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.13 E-value=0.00043 Score=55.54 Aligned_cols=37 Identities=16% Similarity=0.104 Sum_probs=30.0
Q ss_pred cCCcEEEEEE-CCCChhHH-HHHHHHHHHHhhccCCCcE
Q psy160 103 ENEFVTVFFY-ETDHKDSV-KVLERLEKIDGETDNMDIT 139 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~-~~~~~~~~~a~~~~~~~i~ 139 (346)
.++++++.|| +.||+.|. .-.|.+.+++++++..++.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~ 72 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVT 72 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 4567888898 89999999 8999999999888433344
No 472
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.12 E-value=0.0017 Score=52.59 Aligned_cols=30 Identities=13% Similarity=0.094 Sum_probs=25.9
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHhhc
Q psy160 104 NEFVTVFFYETDHKDSVKVLERLEKIDGET 133 (346)
Q Consensus 104 ~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~ 133 (346)
.+..++.|+.++|++|..+.+.+.++.+.+
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHH
Confidence 356799999999999999999888877666
No 473
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.12 E-value=0.0036 Score=49.37 Aligned_cols=120 Identities=11% Similarity=0.103 Sum_probs=74.8
Q ss_pred hhccccCcEEEccHHHHHHHHhccceEEEEEEcC-CChhhHHHHHHHHHHHhhcCcCceEEEEEcC--h---hhhhhCCC
Q psy160 186 ITQKTEDRIELITRVMLETMVEETQYLAVYFYKL-NCNICDQILEGLEKVDDECDIYGIHMVKIQD--P---QLAKRYSI 259 (346)
Q Consensus 186 ~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~~~-~c~~c~~~~~~~~~la~~~~~~~i~~~~i~~--~---~~~~~~~i 259 (346)
.++..| .|..+|.++...+..+.-+..++++.. .-..-..+.+.++++|+.+++ ++.|+.++. . ...+.||+
T Consensus 9 ~~~~~P-LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg-ki~Fv~vd~~~~~~~~~l~~fGl 86 (147)
T 3bj5_A 9 KHNQLP-LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFAFIDSDHTDNQRILEFFGL 86 (147)
T ss_dssp -------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT-TCEEEEECTTCGGGHHHHHHTTC
T ss_pred hhccCC-eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC-ceEEEEEecchHhHHHHHHHcCC
Confidence 334444 777999999988887766655554443 333356788999999999997 899998833 2 36688999
Q ss_pred cc--ccEEEEEeC-CeEEEee---cCccccccchhhhhhhccC-CCCCCcccCCCCCC
Q psy160 260 KT--FPALVYFRN-GNPLIFE---GENKILKGTYIGTYISTKA-FSLIPFCFSEKHPG 310 (346)
Q Consensus 260 ~~--~Pti~~~~~-g~~~~y~---g~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~ 310 (346)
+. .|+++++.. +....|. +..+. ..|..|++.-. ..+-|.+-||..|+
T Consensus 87 ~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~---~~i~~Fv~d~l~GkL~p~~KSEpiPe 141 (147)
T 3bj5_A 87 KKEECPAVRLITLEEEMTKYKPESEELTA---ERITEFCHRFLEGKIKPHLMSQELPE 141 (147)
T ss_dssp CGGGCSEEEEEECSSSCEEECCSCCCCCH---HHHHHHHHHHHTTCSCEEECCSCCCG
T ss_pred CcccCCEEEEEecccccccCCCCcccCCH---HHHHHHHHHHHcCCccccccCCCCCC
Confidence 85 899999874 3222342 44432 22666666532 23335555555443
No 474
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.12 E-value=0.00044 Score=55.48 Aligned_cols=52 Identities=17% Similarity=0.255 Sum_probs=37.7
Q ss_pred cceEEEEEE-cCCChhhH-HHHHHHHHHHhhcCcCceE-EEEE--cC----hhhhhhCCCc
Q psy160 209 TQYLAVYFY-KLNCNICD-QILEGLEKVDDECDIYGIH-MVKI--QD----PQLAKRYSIK 260 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~-~~~~~~~~la~~~~~~~i~-~~~i--~~----~~~~~~~~i~ 260 (346)
.++++|.|| +.||++|. ...|.+.++.+++++.++. ++.| +. ..+++++++.
T Consensus 35 gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~ 95 (162)
T 1tp9_A 35 GKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPEN 95 (162)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTC
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCC
Confidence 467889999 89999999 7899999999888644566 6665 22 2345555554
No 475
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.10 E-value=0.00052 Score=59.28 Aligned_cols=71 Identities=10% Similarity=0.241 Sum_probs=52.2
Q ss_pred HHHHhccc-eEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE--c----------------------------Ch
Q psy160 203 ETMVEETQ-YLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI--Q----------------------------DP 251 (346)
Q Consensus 203 ~~~~~~~~-~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~----------------------------~~ 251 (346)
.+++...+ .+++.|+++||+.|....+.+.++.++++..++.++.+ + +.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 34442334 45667889999999999999999999987556777766 1 23
Q ss_pred hhhhhCCCc-------cccEEEEEe-CCeE
Q psy160 252 QLAKRYSIK-------TFPALVYFR-NGNP 273 (346)
Q Consensus 252 ~~~~~~~i~-------~~Pti~~~~-~g~~ 273 (346)
.+++.|++. ++|+++++. +|+.
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I 136 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVI 136 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBE
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeE
Confidence 467788886 899988884 6763
No 476
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.09 E-value=0.001 Score=47.21 Aligned_cols=68 Identities=9% Similarity=0.013 Sum_probs=45.8
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC---C----hhhHHhhCC-----CCcceEEEEecCCcceecCC
Q psy160 107 VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA---D----PRYARKWGV-----TKLPAVVYFRHRFPSIYRGD 174 (346)
Q Consensus 107 ~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~---~----~~l~~~~~i-----~~~Ptl~~~~~g~~~~y~g~ 174 (346)
.++.|+++||++|++....+.+... .+.+..+| . .++.+.+|. .++|++.+ +|+. -|.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i-----~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~---i~g 74 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNI-----AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEH---IGG 74 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTC-----CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEE---EES
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCC-----CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEE---EeC
Confidence 4788999999999999888876542 35556555 1 347777888 99999964 6642 233
Q ss_pred cchhHHHHHHHhh
Q psy160 175 LSEEEEVLQWLIT 187 (346)
Q Consensus 175 ~~~~~~i~~fi~~ 187 (346)
.. ++.+++.+
T Consensus 75 ~~---~i~~~~~~ 84 (89)
T 3msz_A 75 FT---ELKANADK 84 (89)
T ss_dssp HH---HHHHTHHH
T ss_pred hH---HHHHHHHH
Confidence 22 45555544
No 477
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.08 E-value=0.00094 Score=53.93 Aligned_cols=53 Identities=8% Similarity=0.249 Sum_probs=39.6
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE--cC----hhhhhhCCCcccc
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI--QD----PQLAKRYSIKTFP 263 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i--~~----~~~~~~~~i~~~P 263 (346)
.++++|.|| +.||++|....|.+.++.+++ . ++.++.| +. ..+++++++..+|
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~ 106 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-GVDVTVVSMDLPFAQKRFCESFNIQNVT 106 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHTTCCSSE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-CceEEEEeCCCHHHHHHHHHHcCCCCeE
Confidence 468899998 799999999999999999888 3 6777776 22 2345566654344
No 478
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.03 E-value=0.0015 Score=49.05 Aligned_cols=67 Identities=22% Similarity=0.331 Sum_probs=44.9
Q ss_pred HHHHHHHHhccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEEc---C-----hhhhhhCCCccccEEEEEeC
Q psy160 199 RVMLETMVEETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKIQ---D-----PQLAKRYSIKTFPALVYFRN 270 (346)
Q Consensus 199 ~~~~~~~~~~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i~---~-----~~~~~~~~i~~~Pti~~~~~ 270 (346)
.+.+++++++++ ++.|.++||++|..+.+.+.++.-. .....++ + ..+.+..|..++|++.+ +
T Consensus 7 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~~i~-----~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~ 77 (114)
T 3h8q_A 7 RRHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSLGVE-----CNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--N 77 (114)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHTTCC-----CEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHcCCC-----cEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--C
Confidence 345666666554 3458999999999999999887432 3344442 2 22456678888999854 7
Q ss_pred CeEE
Q psy160 271 GNPL 274 (346)
Q Consensus 271 g~~~ 274 (346)
|+.+
T Consensus 78 g~~i 81 (114)
T 3h8q_A 78 KVHV 81 (114)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 8644
No 479
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.02 E-value=0.00092 Score=53.54 Aligned_cols=38 Identities=5% Similarity=0.072 Sum_probs=32.2
Q ss_pred cceEEEEEEc-CCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFYK-LNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~~-~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.||+ .||++|....|.+.++.+++ . ++.++.|
T Consensus 42 gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-~v~vv~i 80 (163)
T 1psq_A 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-NTVVLTV 80 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEE
T ss_pred CCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CcEEEEE
Confidence 4688999995 99999999999999999888 3 6777666
No 480
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.02 E-value=0.0031 Score=50.86 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=31.0
Q ss_pred CCcEEEEEECCCCh-hHHHHHHHHHHHHhhccC--CCcEEE
Q psy160 104 NEFVTVFFYETDHK-DSVKVLERLEKIDGETDN--MDITFV 141 (346)
Q Consensus 104 ~~~~lv~F~~~~C~-~c~~~~~~~~~~a~~~~~--~~i~~~ 141 (346)
+++++|.|+++||+ .|...++.+.++.+++.. .++.++
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv 68 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVI 68 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEE
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEE
Confidence 67899999999997 699999999999998842 334444
No 481
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.99 E-value=0.0019 Score=46.23 Aligned_cols=55 Identities=16% Similarity=0.395 Sum_probs=38.8
Q ss_pred EEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE-cCh----hhhhhCCCccccEEEEEeCCeEE
Q psy160 213 AVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI-QDP----QLAKRYSIKTFPALVYFRNGNPL 274 (346)
Q Consensus 213 lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i-~~~----~~~~~~~i~~~Pti~~~~~g~~~ 274 (346)
++.|+++||++|+.+.+.+.+.. ..+....+ .++ ++.+.+++.++|++ +.+|+.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~~-----i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i 67 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARKG-----AEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHV 67 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT-----CCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC-----CCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 66799999999999999888763 23444555 233 34457889999975 5577643
No 482
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.98 E-value=0.0005 Score=56.00 Aligned_cols=62 Identities=11% Similarity=0.156 Sum_probs=38.8
Q ss_pred HHHHHhccceEEEEEEcCCChhhH-HHHHHHHHHHhhcCcCceEEEE-E--cC----hhhhhhCCCc-ccc
Q psy160 202 LETMVEETQYLAVYFYKLNCNICD-QILEGLEKVDDECDIYGIHMVK-I--QD----PQLAKRYSIK-TFP 263 (346)
Q Consensus 202 ~~~~~~~~~~~lv~F~~~~c~~c~-~~~~~~~~la~~~~~~~i~~~~-i--~~----~~~~~~~~i~-~~P 263 (346)
+.++++.+..+++.|++.||++|. ...|.+.+++++++..++.++. + +. ..++++.++. .||
T Consensus 37 L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp 107 (173)
T 3mng_A 37 LAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVR 107 (173)
T ss_dssp HHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCE
T ss_pred hHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceE
Confidence 344334333444444599999999 4889999999998754565553 4 22 3455566654 354
No 483
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.97 E-value=0.00072 Score=54.35 Aligned_cols=38 Identities=5% Similarity=0.236 Sum_probs=32.2
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.|| +.||++|....|.+.++.+++ . ++.++.|
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~-~v~vv~I 81 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S-NTIVLCI 81 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T-TEEEEEE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CCEEEEE
Confidence 468899998 799999999999999999888 3 6777666
No 484
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.96 E-value=0.0012 Score=53.14 Aligned_cols=55 Identities=5% Similarity=0.010 Sum_probs=36.6
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC----hhhHHhhCCCCcc
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKMAD----PRYARKWGVTKLP 158 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~----~~l~~~~~i~~~P 158 (346)
.+++++|.|| +.||++|...+|.+.+++++ ++..+..+..|. ...++++++..+|
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~ 104 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-EEGIVLTISADLPFAQKRWCASAGLDNVI 104 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TTSEEEEEESSCHHHHHHHHHHHTCSSCE
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-CCCEEEEEECCCHHHHHHHHHHcCCCceE
Confidence 3577888888 78999999999999999887 433333333342 2345555554444
No 485
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.95 E-value=0.00076 Score=56.94 Aligned_cols=40 Identities=13% Similarity=0.241 Sum_probs=34.4
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..++++|.|||+||++|. ..|.++++.+++.+.++.++.+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgv 94 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGF 94 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEE
Confidence 357999999999999998 7899999999997656777776
No 486
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.92 E-value=0.0019 Score=48.08 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=43.6
Q ss_pred HHHHHHHhcCCcEEEEEEC-----CCChhHHHHHHHHHHHHhhccCCCcEEEEeC-Ch----hhHHhhCCCCcceEEEEe
Q psy160 95 RMLDKLLEENEFVTVFFYE-----TDHKDSVKVLERLEKIDGETDNMDITFVKMA-DP----RYARKWGVTKLPAVVYFR 164 (346)
Q Consensus 95 ~~~~~~~~~~~~~lv~F~~-----~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~----~l~~~~~i~~~Ptl~~~~ 164 (346)
+.+++++.+++ ++.|+. +||++|++..+.+.+.. ..+..+.++ ++ .+.+..|...+|+| |.
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~~-----i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i--fi 76 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNSTG-----VEYETFDILEDEEVRQGLKTFSNWPTYPQL--YV 76 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHTC-----SCEEEEESSSCHHHHHHHHHHHSCCSSCEE--EC
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHcC-----CCeEEEECCCCHHHHHHHHHHhCCCCCCEE--EE
Confidence 44677776654 556777 99999999998887652 234455555 33 35566789999985 45
Q ss_pred cCC
Q psy160 165 HRF 167 (346)
Q Consensus 165 ~g~ 167 (346)
+|+
T Consensus 77 ~g~ 79 (109)
T 1wik_A 77 RGD 79 (109)
T ss_dssp SSS
T ss_pred CCE
Confidence 665
No 487
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.003 Score=48.46 Aligned_cols=68 Identities=12% Similarity=0.123 Sum_probs=46.4
Q ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeCC----hh----hHHhhCCCCcceEEEEec
Q psy160 94 RRMLDKLLEENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMAD----PR----YARKWGVTKLPAVVYFRH 165 (346)
Q Consensus 94 ~~~~~~~~~~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~----~~----l~~~~~i~~~Ptl~~~~~ 165 (346)
.+++++++..++ ++.|+.+||++|.+....|.+... + +.....+.++. .. +.+..|...+|++++ +
T Consensus 4 ~~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI--~ 77 (127)
T 3l4n_A 4 QKEYSLILDLSP--IIIFSKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV--N 77 (127)
T ss_dssp HHHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE--C
Confidence 467888877665 789999999999999988877421 1 22356666651 11 334568899999854 5
Q ss_pred CC
Q psy160 166 RF 167 (346)
Q Consensus 166 g~ 167 (346)
|+
T Consensus 78 G~ 79 (127)
T 3l4n_A 78 GV 79 (127)
T ss_dssp TE
T ss_pred CE
Confidence 54
No 488
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.88 E-value=0.0015 Score=53.92 Aligned_cols=40 Identities=13% Similarity=0.273 Sum_probs=35.1
Q ss_pred ccceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 208 ETQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 208 ~~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
..+++++.|+++||++|..+.|.+.++.+.+.+ ++.+..+
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQV 63 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEE
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEE
Confidence 356889999999999999999999999999876 6777766
No 489
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.87 E-value=0.00045 Score=55.59 Aligned_cols=39 Identities=3% Similarity=0.088 Sum_probs=30.7
Q ss_pred cCCcEEEEEE-CCCChhHHHHHHHHHHHHhhccCCCcEEEEe
Q psy160 103 ENEFVTVFFY-ETDHKDSVKVLERLEKIDGETDNMDITFVKM 143 (346)
Q Consensus 103 ~~~~~lv~F~-~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~ 143 (346)
.+++++|.|| +.||+.|...+|.+.++.+++ .++.++.+
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~I 81 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCI 81 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEE
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEE
Confidence 3567889998 799999999999999999887 33444433
No 490
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.86 E-value=0.001 Score=55.82 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=33.7
Q ss_pred cceEEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.||++||++| ...|.+.++.+++++.++.++.+
T Consensus 38 GKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgv 76 (207)
T 2r37_A 38 GKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGF 76 (207)
T ss_dssp TSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEE
Confidence 4799999999999999 67899999999997656777776
No 491
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.86 E-value=0.00032 Score=51.74 Aligned_cols=66 Identities=17% Similarity=0.211 Sum_probs=41.5
Q ss_pred CeecCCCChhhHHHHHHHHHHHhhhcccCCeEEEcCC------hHHH----HhcCCCCCCeEEEEeCC-ceeeecCCCCC
Q psy160 1 MYINDENCPECDDILEELEHIDGDADQYGIDMVKISD------TEAA----AKYNIINLPSLVYFRKQ-VPLLYDGDLFD 69 (346)
Q Consensus 1 v~Fy~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~~------~~~c----~~~~i~~~Ptl~~f~~~-~~~~y~G~~~~ 69 (346)
+.|+++||++|+++.+.|++..-.+ ..+.++. .++. ..+++.+.|++++ ++ .. -|..+.
T Consensus 25 ~ly~~~~Cp~C~~ak~~L~~~~i~y-----~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~~---igg~~~ 94 (103)
T 3nzn_A 25 IMYGLSTCVWCKKTKKLLTDLGVDF-----DYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEKA---IVGFKE 94 (103)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTBCE-----EEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTEE---EESCCH
T ss_pred EEEcCCCCchHHHHHHHHHHcCCCc-----EEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCEE---EEcCCH
Confidence 3688999999999998888764332 3344431 1232 3468999999776 33 32 344444
Q ss_pred HHHHHHHH
Q psy160 70 EEKILTWL 77 (346)
Q Consensus 70 ~~~i~~~i 77 (346)
+.|.++|
T Consensus 95 -~~l~~~L 101 (103)
T 3nzn_A 95 -KEIRESL 101 (103)
T ss_dssp -HHHHHHT
T ss_pred -HHHHHHh
Confidence 4666654
No 492
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=96.85 E-value=0.0044 Score=50.32 Aligned_cols=31 Identities=6% Similarity=0.015 Sum_probs=27.2
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhc
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGET 133 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~ 133 (346)
++++.+|.|+.-.|+||+++.+.+.++.+.+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~ 50 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQL 50 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhc
Confidence 3467899999999999999999998888776
No 493
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.82 E-value=0.004 Score=44.79 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=45.1
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC-ChhhHH---h--hCCCCcceEEEEecCCcceecCCcchhHH
Q psy160 107 VTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-DPRYAR---K--WGVTKLPAVVYFRHRFPSIYRGDLSEEEE 180 (346)
Q Consensus 107 ~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-~~~l~~---~--~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~ 180 (346)
.++.|.++||++|.+....+.+. +..+..++++ +++..+ + -|.+.+|+|++ .+|.. ..|. + .++
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-----gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~--l~~~-~-~~e 74 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-----RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGST--LTNP-S-ADE 74 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCE--EESC-C-HHH
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-----CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEE--EeCC-C-HHH
Confidence 47889999999999988777653 3335555665 333332 2 27889999865 45542 2232 2 236
Q ss_pred HHHHHhhc
Q psy160 181 VLQWLITQ 188 (346)
Q Consensus 181 i~~fi~~~ 188 (346)
|.+++.+.
T Consensus 75 l~~~L~el 82 (92)
T 2lqo_A 75 VKAKLVKI 82 (92)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777654
No 494
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.81 E-value=0.0035 Score=52.14 Aligned_cols=38 Identities=8% Similarity=0.306 Sum_probs=31.8
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.|| +.||++|....+.+.++.++++ ++.++.|
T Consensus 78 Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~--~v~vv~I 116 (200)
T 3zrd_A 78 GKRKVLNIFPSIDTGVCAASVRKFNQLAGELE--NTVVLCI 116 (200)
T ss_dssp TSEEEEEECSCCCCSCCCHHHHHHHHHHHTST--TEEEEEE
T ss_pred CCcEEEEEECCCCCchhHHHHHHHHHHHHHhC--CCEEEEE
Confidence 468889998 6799999999999999999883 5666666
No 495
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.81 E-value=0.00093 Score=54.37 Aligned_cols=55 Identities=9% Similarity=0.054 Sum_probs=37.6
Q ss_pred CCcEEEEEE-CCCChhHH-HHHHHHHHHHhhccCCCcEE---EEeCC----hhhHHhhCCC-Ccc
Q psy160 104 NEFVTVFFY-ETDHKDSV-KVLERLEKIDGETDNMDITF---VKMAD----PRYARKWGVT-KLP 158 (346)
Q Consensus 104 ~~~~lv~F~-~~~C~~c~-~~~~~~~~~a~~~~~~~i~~---~~~~~----~~l~~~~~i~-~~P 158 (346)
++++++.|| +.||+.|. .-+|.+.+++++++..++.+ +..|. ...++++++. .||
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp 107 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVR 107 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCE
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceE
Confidence 455555555 99999999 48999999999986555443 44453 3455666765 455
No 496
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.81 E-value=0.0018 Score=45.80 Aligned_cols=56 Identities=11% Similarity=0.149 Sum_probs=39.8
Q ss_pred EEEEEEcCCChhhHHHHHHHHHHHhhcCcCceEEEEE---cC----hhhhhhCCC-----ccccEEEEEeCCeEE
Q psy160 212 LAVYFYKLNCNICDQILEGLEKVDDECDIYGIHMVKI---QD----PQLAKRYSI-----KTFPALVYFRNGNPL 274 (346)
Q Consensus 212 ~lv~F~~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i---~~----~~~~~~~~i-----~~~Pti~~~~~g~~~ 274 (346)
.++.|+++||++|+.+...+.+++-. +.+..+ .+ .++.+..+. .++|++.+ +|+.+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i~-----~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i 72 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNIA-----FDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI 72 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCC-----CEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCCC-----ceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE
Confidence 36778899999999999988876532 334444 11 356777787 89999854 77644
No 497
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.76 E-value=0.0022 Score=52.91 Aligned_cols=80 Identities=8% Similarity=-0.027 Sum_probs=0.0
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC--------------------------------------
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA-------------------------------------- 144 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~-------------------------------------- 144 (346)
+.++.++.|+++||++|..+.|.+.++.+.+.. ++.+..+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~~ 99 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQK 99 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhC
Q ss_pred ---------------------------------------ChhhHHhhCCCCcceEEEEecCCcceecCCcchhHHHHHHH
Q psy160 145 ---------------------------------------DPRYARKWGVTKLPAVVYFRHRFPSIYRGDLSEEEEVLQWL 185 (346)
Q Consensus 145 ---------------------------------------~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~~i~~fi 185 (346)
+..+++++||.+.||+++ +......|..+.+ .+.+.+
T Consensus 100 ~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~vi---ng~~~~~g~~~~~-~l~~~i 175 (195)
T 2znm_A 100 IRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIV---GGKYRVIFNNGFD-GGVHTI 175 (195)
T ss_dssp SCTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE---TTTEEECCCSHHH-HHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeEEE---CCEEEEcCCCCHH-HHHHHH
Q ss_pred hh
Q psy160 186 IT 187 (346)
Q Consensus 186 ~~ 187 (346)
..
T Consensus 176 ~~ 177 (195)
T 2znm_A 176 KE 177 (195)
T ss_dssp HH
T ss_pred HH
No 498
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.75 E-value=0.0031 Score=50.60 Aligned_cols=37 Identities=11% Similarity=0.205 Sum_probs=29.2
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.|| +.||++|....|.+.++.++ + ++.++.+
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--~~~vv~i 83 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--EGIVLTI 83 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--TSEEEEE
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--CCEEEEE
Confidence 467888888 78999999999999999877 3 4555544
No 499
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.74 E-value=0.0018 Score=53.51 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=0.0
Q ss_pred cCCcEEEEEECCCChhHHHHHHHHHHHHhhccCCCcEEEEeC
Q psy160 103 ENEFVTVFFYETDHKDSVKVLERLEKIDGETDNMDITFVKMA 144 (346)
Q Consensus 103 ~~~~~lv~F~~~~C~~c~~~~~~~~~~a~~~~~~~i~~~~~~ 144 (346)
.+++.+|.|+++||+||+++.|.+.++.+.+.+ ++.|..+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p 63 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEH 63 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEE
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEec
No 500
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.74 E-value=0.002 Score=55.81 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=33.8
Q ss_pred cceEEEEEE-cCCChhhHHHHHHHHHHHhhcCcCceEEEEE
Q psy160 209 TQYLAVYFY-KLNCNICDQILEGLEKVDDECDIYGIHMVKI 248 (346)
Q Consensus 209 ~~~~lv~F~-~~~c~~c~~~~~~~~~la~~~~~~~i~~~~i 248 (346)
.++++|.|| +.||++|....+.+.++.+++++.++.++.|
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~I 131 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVAC 131 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 468889998 9999999999999999999987556776666
Done!