Query         psy16005
Match_columns 248
No_of_seqs    580 out of 1413
Neff          11.8
Searched_HMMs 13730
Date          Fri Aug 16 18:32:35 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy16005.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16005hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 6.1E-45 4.5E-49  273.8  31.2  246    3-248     3-271 (311)
  2 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 1.9E-41 1.4E-45  257.5  32.1  232   15-248    49-298 (337)
  3 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 7.2E-40 5.2E-44  248.8  31.8  227   14-244    94-335 (337)
  4 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 1.4E-40 9.8E-45  256.0  28.1  227   17-245     7-272 (371)
  5 d1tbga_ b.69.4.1 (A:) beta1-su 100.0 1.4E-39 9.9E-44  246.4  33.2  229   14-243    52-340 (340)
  6 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 4.7E-40 3.4E-44  247.1  29.7  230   14-245    55-311 (311)
  7 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 4.4E-40 3.2E-44  253.9  29.8  229   15-246    60-387 (388)
  8 d1nr0a2 b.69.4.1 (A:313-611) A 100.0 2.2E-39 1.6E-43  241.9  30.0  236   11-247     6-256 (299)
  9 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 1.9E-38 1.4E-42  237.3  29.9  227   14-243    14-317 (317)
 10 d1pgua1 b.69.4.1 (A:2-326) Act 100.0 2.1E-35 1.6E-39  222.9  26.4  246    2-248     2-284 (325)
 11 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 2.3E-35 1.7E-39  226.6  26.0  232   14-246    48-360 (371)
 12 d1pgua1 b.69.4.1 (A:2-326) Act 100.0 8.1E-34 5.9E-38  214.2  27.8  231   12-244    58-325 (325)
 13 d1tbga_ b.69.4.1 (A:) beta1-su 100.0 2.8E-33   2E-37  211.4  27.9  198   49-248    46-303 (340)
 14 d1nexb2 b.69.4.1 (B:370-744) C 100.0 2.2E-32 1.6E-36  207.2  28.6  228   15-248    10-274 (355)
 15 d1nr0a2 b.69.4.1 (A:313-611) A 100.0 1.2E-32 8.5E-37  205.2  24.6  197   48-247     2-211 (299)
 16 d2ovrb2 b.69.4.1 (B:2365-2706) 100.0 6.4E-32 4.7E-36  203.7  27.7  228   14-246    13-340 (342)
 17 d1yfqa_ b.69.4.2 (A:) Cell cyc 100.0 1.8E-31 1.3E-35  200.9  29.8  237   11-248     5-284 (342)
 18 d1sq9a_ b.69.4.1 (A:) Antivira 100.0 6.1E-32 4.4E-36  208.9  27.6  235   11-248     8-322 (393)
 19 d1pgua2 b.69.4.1 (A:327-613) A 100.0   6E-32 4.4E-36  200.2  20.8  226    7-244     4-286 (287)
 20 d1k32a3 b.69.9.1 (A:320-679) T 100.0   6E-31 4.4E-35  200.2  24.8  175   22-201     7-207 (360)
 21 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 1.7E-30 1.2E-34  193.7  26.5  199   48-248     7-280 (317)
 22 d1p22a2 b.69.4.1 (A:253-545) F 100.0 4.3E-30 3.1E-34  189.6  26.5  221   14-243    12-293 (293)
 23 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 5.4E-30   4E-34  197.1  27.9  215   32-247    32-286 (388)
 24 d1nexb2 b.69.4.1 (B:370-744) C 100.0 4.2E-28 3.1E-32  183.4  30.1  232    7-244    44-352 (355)
 25 d2ovrb2 b.69.4.1 (B:2365-2706) 100.0 1.5E-28 1.1E-32  185.0  23.4  197   43-248     1-291 (342)
 26 d1hzua2 b.70.2.1 (A:118-543) C 100.0 3.5E-27 2.5E-31  183.9  23.3  223   25-248    26-399 (426)
 27 d1pgua2 b.69.4.1 (A:327-613) A 100.0   7E-28 5.1E-32  178.1  17.0  188   48-247     3-247 (287)
 28 d1sq9a_ b.69.4.1 (A:) Antivira 100.0 3.4E-27 2.5E-31  182.1  20.0  211   16-244   118-391 (393)
 29 d1l0qa2 b.69.2.3 (A:1-301) Sur 100.0 1.1E-24 7.7E-29  161.5  31.1  234    7-248    23-277 (301)
 30 d1jmxb_ b.69.2.2 (B:) Quinohem  99.9 6.3E-25 4.6E-29  165.7  19.7  220   23-248     2-324 (346)
 31 d1pbyb_ b.69.2.2 (B:) Quinohem  99.9 3.8E-24 2.8E-28  160.8  23.3  213   30-248     2-312 (337)
 32 d1yfqa_ b.69.4.2 (A:) Cell cyc  99.9 4.4E-25 3.2E-29  165.6  17.7  228   15-244    54-321 (342)
 33 d1qksa2 b.70.2.1 (A:136-567) C  99.9 3.8E-24 2.8E-28  166.7  21.3  240    7-248    53-405 (432)
 34 d1p22a2 b.69.4.1 (A:253-545) F  99.9 1.4E-22   1E-26  148.8  25.9  186   51-245     8-246 (293)
 35 d1k32a3 b.69.9.1 (A:320-679) T  99.9 2.3E-23 1.7E-27  158.0  19.9  177   63-246     7-209 (360)
 36 d1qksa2 b.70.2.1 (A:136-567) C  99.9 1.6E-22 1.1E-26  157.5  19.7  192   25-247    28-239 (432)
 37 d1ri6a_ b.69.11.1 (A:) Putativ  99.9 2.6E-21 1.9E-25  145.1  24.8  230   15-244    34-305 (333)
 38 d1hzua2 b.70.2.1 (A:118-543) C  99.9 1.8E-22 1.3E-26  157.1  18.0  216    7-231    53-418 (426)
 39 d1pbyb_ b.69.2.2 (B:) Quinohem  99.9 5.6E-21 4.1E-25  143.3  25.5  200    6-211    21-318 (337)
 40 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.9 4.9E-20 3.6E-24  136.1  29.3  207   36-248    10-235 (301)
 41 d2bbkh_ b.69.2.1 (H:) Methylam  99.9 6.3E-21 4.6E-25  144.4  24.2  225   20-248     4-334 (355)
 42 d2madh_ b.69.2.1 (H:) Methylam  99.9 6.1E-20 4.4E-24  139.9  28.7  230   15-248    18-352 (373)
 43 d1jmxb_ b.69.2.2 (B:) Quinohem  99.8 3.5E-18 2.6E-22  128.2  18.9  203    6-211    28-330 (346)
 44 d1ri6a_ b.69.11.1 (A:) Putativ  99.8 1.6E-16 1.1E-20  118.7  26.6  211   36-246    12-261 (333)
 45 d1mdah_ b.69.2.1 (H:) Methylam  99.8 5.9E-18 4.3E-22  128.8  18.7  223   22-248    69-348 (368)
 46 d2bbkh_ b.69.2.1 (H:) Methylam  99.8 8.9E-17 6.5E-21  121.2  22.1  207   19-226    48-354 (355)
 47 d2bgra1 b.70.3.1 (A:39-508) Di  99.7 2.5E-16 1.8E-20  123.5  21.3  105   15-121    59-189 (470)
 48 d1qnia2 b.69.3.1 (A:10-450) Ni  99.7 1.7E-14 1.2E-18  110.1  22.6  208   37-245    20-341 (441)
 49 d2madh_ b.69.2.1 (H:) Methylam  99.7 5.1E-14 3.7E-18  106.7  24.7  197   17-226   164-372 (373)
 50 d1qnia2 b.69.3.1 (A:10-450) Ni  99.6 2.8E-15   2E-19  114.5  15.4  216   16-234    70-387 (441)
 51 d2bgra1 b.70.3.1 (A:39-508) Di  99.6 2.6E-14 1.9E-18  111.9  18.3  203   20-233    19-277 (470)
 52 d2p4oa1 b.68.6.3 (A:4-305) Hyp  99.6   5E-12 3.7E-16   93.1  27.0  222    7-234    19-272 (302)
 53 d1rwia_ b.68.9.1 (A:) Serine/t  99.6 1.1E-11 7.9E-16   89.2  26.6  225   16-244    12-252 (260)
 54 d1jofa_ b.69.10.1 (A:) 3-carbo  99.6   2E-12 1.4E-16   97.8  22.9  231   16-246    38-341 (365)
 55 d1pjxa_ b.68.6.1 (A:) Diisopro  99.5 5.2E-11 3.8E-15   87.9  29.2  226   19-245    19-298 (314)
 56 d2hqsa1 b.68.4.1 (A:163-431) T  99.5 6.2E-11 4.5E-15   85.4  27.2  202   39-247    20-248 (269)
 57 d2hqsa1 b.68.4.1 (A:163-431) T  99.5 3.1E-11 2.3E-15   87.0  25.1  203   17-225    38-267 (269)
 58 d1q7fa_ b.68.9.1 (A:) Brain tu  99.5   5E-10 3.7E-14   81.2  28.5  225   18-247    23-274 (279)
 59 d1mdah_ b.69.2.1 (H:) Methylam  99.5 1.7E-12 1.2E-16   98.3  15.6  198   20-223   126-364 (368)
 60 d1k32a2 b.68.7.1 (A:39-319) Tr  99.4 1.2E-10 8.9E-15   84.2  24.4  219   24-248     5-264 (281)
 61 d2dg1a1 b.68.6.1 (A:6-324) Lac  99.4 8.6E-10 6.3E-14   81.5  28.2  215   19-234    41-293 (319)
 62 d1xfda1 b.70.3.1 (A:127-591) D  99.3 6.4E-11 4.7E-15   92.1  17.4  216   22-248    21-291 (465)
 63 d1jofa_ b.69.10.1 (A:) 3-carbo  99.3 4.1E-10   3E-14   84.9  20.0  208   37-245    13-290 (365)
 64 d1rwia_ b.68.9.1 (A:) Serine/t  99.2   8E-09 5.8E-13   73.9  22.7  184   59-245    14-211 (260)
 65 d2p4oa1 b.68.6.3 (A:4-305) Hyp  99.2   9E-09 6.5E-13   75.3  22.9  181   60-245    29-237 (302)
 66 d1pjxa_ b.68.6.1 (A:) Diisopro  99.1 2.5E-08 1.8E-12   73.3  22.0  184   18-205    71-301 (314)
 67 d2dg1a1 b.68.6.1 (A:6-324) Lac  99.1 1.5E-07 1.1E-11   69.2  26.0  185   58-244    39-256 (319)
 68 d1xfda1 b.70.3.1 (A:127-591) D  99.1 7.3E-08 5.3E-12   74.6  23.1  230   18-247   114-444 (465)
 69 d1q7fa_ b.68.9.1 (A:) Brain tu  99.0 3.2E-07 2.3E-11   66.1  24.5  183   20-205    72-275 (279)
 70 d2ghsa1 b.68.6.1 (A:20-314) Re  99.0   1E-06 7.4E-11   63.9  27.1  206   22-233    22-258 (295)
 71 d2ghsa1 b.68.6.1 (A:20-314) Re  98.8   6E-06 4.4E-10   59.7  22.5  178   62-244    21-227 (295)
 72 d1k32a2 b.68.7.1 (A:39-319) Tr  98.6 5.3E-06 3.9E-10   59.1  18.8  184   16-207    39-266 (281)
 73 d1fwxa2 b.69.3.1 (A:8-451) Nit  98.6 9.5E-06 6.9E-10   60.5  19.1  212   22-245    89-358 (459)
 74 d1npea_ b.68.5.1 (A:) Nidogen   98.6 3.4E-05 2.5E-09   54.6  24.8  204   18-225    36-260 (263)
 75 d1qfma1 b.69.7.1 (A:1-430) Pro  98.3 0.00041   3E-08   52.6  25.8  228   19-248   126-416 (430)
 76 d1k3ia3 b.69.1.1 (A:151-537) G  98.2 0.00039 2.8E-08   51.7  22.4  104   18-122    20-139 (387)
 77 d1npea_ b.68.5.1 (A:) Nidogen   98.2 0.00035 2.5E-08   49.3  25.7  213   29-247     1-239 (263)
 78 d1ijqa1 b.68.5.1 (A:377-642) L  98.1 0.00064 4.6E-08   48.0  27.9  214   31-247     3-239 (266)
 79 d1fwxa2 b.69.3.1 (A:8-451) Nit  98.0 0.00092 6.7E-08   49.8  18.9  151   39-191   174-404 (459)
 80 d2ad6a1 b.70.1.1 (A:1-571) Met  98.0  0.0018 1.3E-07   50.8  21.7  194   38-232   272-524 (571)
 81 d2ad6a1 b.70.1.1 (A:1-571) Met  98.0 0.00044 3.2E-08   54.4  17.9   67   29-96    116-192 (571)
 82 d1kv9a2 b.70.1.1 (A:1-560) Qui  97.9 0.00062 4.5E-08   53.5  16.4  194   39-232   271-518 (560)
 83 d1w6sa_ b.70.1.1 (A:) Methanol  97.8  0.0043 3.1E-07   49.0  21.1   66   31-96    123-198 (596)
 84 d1ijqa1 b.68.5.1 (A:377-642) L  97.8  0.0026 1.9E-07   44.7  25.6  190   17-210    29-245 (266)
 85 d1kv9a2 b.70.1.1 (A:1-560) Qui  97.7  0.0026 1.9E-07   49.8  18.1   53  194-248   438-490 (560)
 86 d1flga_ b.70.1.1 (A:) Ethanol   97.6  0.0085 6.2E-07   47.1  21.8   93  154-246   465-581 (582)
 87 d1v04a_ b.68.6.2 (A:) Serum pa  97.6  0.0019 1.4E-07   47.2  14.2  173   61-233    37-269 (340)
 88 d1utca2 b.69.6.1 (A:4-330) Cla  97.5  0.0079 5.7E-07   42.5  25.0  215   22-241    67-323 (327)
 89 d1kb0a2 b.70.1.1 (A:1-573) Qui  97.3    0.02 1.5E-06   44.8  18.5   75  117-191   460-539 (573)
 90 d1kb0a2 b.70.1.1 (A:1-573) Qui  97.2  0.0063 4.6E-07   47.8  14.5   75  155-232   457-537 (573)
 91 d1utca2 b.69.6.1 (A:4-330) Cla  97.1   0.025 1.8E-06   39.9  26.9  204   37-248    44-288 (327)
 92 d1w6sa_ b.70.1.1 (A:) Methanol  97.0   0.056 4.1E-06   42.4  21.2  193   39-232   279-533 (596)
 93 d1k3ia3 b.69.1.1 (A:151-537) G  96.7   0.023 1.7E-06   41.6  12.9   72  176-247    79-157 (387)
 94 d1h6la_ b.68.3.1 (A:) Thermost  96.5   0.083 6.1E-06   38.3  19.6  173   69-246    39-263 (353)
 95 d1crua_ b.68.2.1 (A:) Soluble   95.9    0.22 1.6E-05   37.5  27.3  106   17-122    26-163 (450)
 96 d1qfma1 b.69.7.1 (A:1-430) Pro  95.5    0.31 2.2E-05   36.3  23.2   59   60-121   126-189 (430)
 97 d1crua_ b.68.2.1 (A:) Soluble   94.9     0.5 3.6E-05   35.5  21.6   55   59-113    27-87  (450)
 98 d1flga_ b.70.1.1 (A:) Ethanol   94.9   0.059 4.3E-06   42.2   8.3   81   38-120   466-547 (582)
 99 d1xipa_ b.69.14.1 (A:) Nucleop  94.7    0.51 3.7E-05   34.5  17.9  185   17-233    36-230 (381)
100 d1xipa_ b.69.14.1 (A:) Nucleop  93.5    0.95 6.9E-05   33.0  17.0  129   19-151    88-230 (381)
101 d1v04a_ b.68.6.2 (A:) Serum pa  93.0     1.1 7.7E-05   32.2  23.4  171   20-190    37-269 (340)
102 d1h6la_ b.68.3.1 (A:) Thermost  90.4     2.2 0.00016   30.6  18.2  180   22-204    30-264 (353)
103 d2hu7a1 b.69.7.2 (A:9-321) Acy  87.6     2.7 0.00019   27.9  16.7  147   19-168   105-272 (313)
104 d1zgka1 b.68.11.1 (A:322-609)   81.6     5.7 0.00042   26.8  20.0   64  183-247   195-268 (288)
105 d2hu7a1 b.69.7.2 (A:9-321) Acy  77.0     7.9 0.00057   25.6  19.8  199   29-243    26-265 (313)
106 d1tl2a_ b.67.1.1 (A:) Tachylec  70.1      11 0.00082   24.3  15.1   99   18-119    40-150 (235)
107 d1q47a_ b.69.12.1 (A:) Semapho  66.9     6.8 0.00049   29.5   6.2   56  186-241   423-487 (495)
108 d1dlpa1 b.78.1.1 (A:1-115) Fet  64.6      10 0.00074   21.9   5.5   25  105-130    57-81  (115)
109 d1kj1a_ b.78.1.1 (A:) Lectin (  59.6      13 0.00091   21.2  11.1   44  106-150    53-98  (109)
110 d1q47a_ b.69.12.1 (A:) Semapho  50.5      37  0.0027   25.3   7.8   55   71-125   422-484 (495)
111 d2nt0a1 b.71.1.2 (A:1-77,A:432  45.4      28   0.002   20.9   7.1   50   16-67     86-141 (143)
112 d1c8ua2 d.38.1.3 (A:116-286) T  45.4     6.4 0.00046   24.6   2.4   27   59-85    144-170 (171)
113 d1c8ua2 d.38.1.3 (A:116-286) T  43.1     7.2 0.00053   24.3   2.4   29  215-243   143-171 (171)
114 d1tl2a_ b.67.1.1 (A:) Tachylec  39.5      44  0.0032   21.5  11.0   97   20-119    89-197 (235)
115 d1dfca4 b.42.5.1 (A:1383-1493)  37.1      33  0.0024   19.5   4.7   13   27-39     46-58  (111)
116 d1kj1a_ b.78.1.1 (A:) Lectin (  35.5      34  0.0025   19.2  12.1   57  176-248    53-109 (109)
117 d1olza2 b.69.12.1 (A:3-480) Se  34.7      65  0.0047   23.8   6.9   56  186-241   415-475 (478)
118 d1jtdb_ b.69.5.2 (B:) beta-lac  34.7      58  0.0042   21.5  21.5  211   16-243    24-245 (273)
119 d1eeja2 d.17.3.1 (A:1-60) Disu  34.4      21  0.0016   17.7   2.9   22  178-205    37-58  (60)
120 d1xd5a_ b.78.1.1 (A:) Gastrodi  30.7      42  0.0031   18.8  10.5   43  106-150    52-96  (112)
121 d2ebsa1 b.69.13.1 (A:4-430) Ol  30.5      85  0.0062   22.2  11.0  119   10-129     4-144 (427)
122 d2f2ha1 b.150.1.1 (A:666-773)   29.0      47  0.0034   18.8   4.9   40   81-120    22-61  (108)
123 d1suua_ b.68.10.1 (A:) DNA gyr  20.7 1.2E+02  0.0087   20.5  22.6  102  145-246   107-224 (304)
124 g1uhe.1 b.52.2.1 (B:,A:) Pyruv  20.7      64  0.0047   18.6   3.6   45   56-102    10-63  (121)

No 1  
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=6.1e-45  Score=273.84  Aligned_cols=246  Identities=30%  Similarity=0.539  Sum_probs=213.4

Q ss_pred             cCcceecccccccccCCcEEEEeCCCCCEEEEeCCcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeE
Q psy16005          3 YSNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKV   82 (248)
Q Consensus         3 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i   82 (248)
                      +++..+++.+|..+++.+..++++|+|+.|+++.++.+.+|++++++....+.+|.+.|++++|+|+|++|++|+.||+|
T Consensus         3 ~~~~~~~~~~p~~~r~~~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i   82 (311)
T d1nr0a1           3 FSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNV   82 (311)
T ss_dssp             CEEEEEECCCCCCCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             ccccccccCCCCCCCCCeEEEEEcCCCCEEEEEeCCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceE
Confidence            34567889999999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             EEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc---EEEEEccC----------CCCCceeEeCCCCCE-E
Q psy16005         83 RIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG---AKVSSLPI----------DYEPSSISLDHEHGL-V  148 (248)
Q Consensus        83 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~~i~~~~~----------~~~~~~~~~~~~~~~-~  148 (248)
                      ++||+.+++......+..|..+|.+++|+|+++++++++.+.   .++|+++.          ...+.+++|+|++++ +
T Consensus        83 ~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l  162 (311)
T d1nr0a1          83 RIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRI  162 (311)
T ss_dssp             EEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEE
T ss_pred             eeeeeeccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeee
Confidence            999999887766667888999999999999999999998654   58898753          234678899999884 7


Q ss_pred             EEEcCCCeEEEEEC--Cceeeeec-ccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcc------cccCCcCeE
Q psy16005        149 AVGGADSKISIVEN--GAKVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA------ELDHLGPVT  219 (248)
Q Consensus       149 ~~~~~~~~i~~~~~--~~~~~~~~-~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~------~~~~~~~v~  219 (248)
                      ++++.|+.|++||.  ++....+. +...+.+++++|+++++++++.|+.|++||..+++....+      ..+|.+.|+
T Consensus       163 ~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~  242 (311)
T d1nr0a1         163 ISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF  242 (311)
T ss_dssp             EEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred             cccccccccccccccccccccccccccccccccccCcccccccccccccccccccccccccccccccccccccccccccc
Confidence            88999999999993  34444443 4567899999999999999999999999999887543222      235889999


Q ss_pred             EEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        220 DCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       220 ~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      +++|+|++++|++++.||.|+|||+++++
T Consensus       243 ~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~  271 (311)
T d1nr0a1         243 GLTWSPDGTKIASASADKTIKIWNVATLK  271 (311)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             ccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence            99999999999999999999999998764


No 2  
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-41  Score=257.52  Aligned_cols=232  Identities=17%  Similarity=0.202  Sum_probs=202.7

Q ss_pred             cccCCcEEEEeCCCCCEEEEeCCcEEEEEecCCCceee-----eeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCC
Q psy16005         15 TQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISD-----IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVN   89 (248)
Q Consensus        15 ~~~~~v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~   89 (248)
                      .|...|.+++|+|+|++|++|+|+.|+|||+.++....     ....|.+.|.+++|+|++++|++|+.||.|++||+..
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~  128 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA  128 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccc
Confidence            58899999999999999999999999999997654322     2347889999999999999999999999999999987


Q ss_pred             CceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccC----------CCCCceeEeCCCCCEEEEEcCCCeEE
Q psy16005         90 KEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPI----------DYEPSSISLDHEHGLVAVGGADSKIS  158 (248)
Q Consensus        90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~  158 (248)
                      ........+..|...+..++|+|++.++++++.++ +.+|++..          ...+.++++++++..+++++.|+.++
T Consensus       129 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~  208 (337)
T d1gxra_         129 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVR  208 (337)
T ss_dssp             C--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            66555567788899999999999999999998775 68888753          45677899999999999999999999


Q ss_pred             EEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCC
Q psy16005        159 IVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH  236 (248)
Q Consensus       159 ~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  236 (248)
                      +||  .++.+..+.+...+.+++|+|++++|++|+.|+.+++||+++++..  ....|...|++++|+|++++|++++.|
T Consensus       209 i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~i~~v~~s~~g~~l~s~s~D  286 (337)
T d1gxra_         209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY--QLHLHESCVLSLKFAYCGKWFVSTGKD  286 (337)
T ss_dssp             EEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE--EECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccccccceeecccccccceEEEEEcccccccceeccccccccccccccccc--cccccccccceEEECCCCCEEEEEeCC
Confidence            999  5677777888889999999999999999999999999999988764  233689999999999999999999999


Q ss_pred             CeEEEEECCCCC
Q psy16005        237 RKVVLYRVPDFE  248 (248)
Q Consensus       237 ~~i~vw~~~~~~  248 (248)
                      |.|++||+.+++
T Consensus       287 g~i~iwd~~~~~  298 (337)
T d1gxra_         287 NLLNAWRTPYGA  298 (337)
T ss_dssp             SEEEEEETTTCC
T ss_pred             CeEEEEECCCCC
Confidence            999999998864


No 3  
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.2e-40  Score=248.75  Aligned_cols=227  Identities=16%  Similarity=0.169  Sum_probs=199.7

Q ss_pred             ccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCC--ceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCC
Q psy16005         14 RTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENP--AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK   90 (248)
Q Consensus        14 ~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~   90 (248)
                      ..|.+.|.+++|+|+|++|++++ |+.|++||+...  +....+..|...+.+++|+|++.++++++.|+.|++|++.++
T Consensus        94 ~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~  173 (337)
T d1gxra_          94 LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  173 (337)
T ss_dssp             SCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             cCCCCcEEEEEEcCCCCEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            35778899999999999999986 999999998754  455667789999999999999999999999999999999988


Q ss_pred             ceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccC---------CCCCceeEeCCCCCEEEEEcCCCeEEEE
Q psy16005         91 EHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPI---------DYEPSSISLDHEHGLVAVGGADSKISIV  160 (248)
Q Consensus        91 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~  160 (248)
                      +..  .....|...+.+++|+++++.+++++.++ +++|+++.         ...+.+++++|+++.+++++.++.+++|
T Consensus       174 ~~~--~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~  251 (337)
T d1gxra_         174 TLV--RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL  251 (337)
T ss_dssp             EEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             ccc--ccccccccccccccccccccccccccccccccccccccceeecccccccceEEEEEcccccccceeccccccccc
Confidence            754  56667889999999999999999999777 58998753         4567889999999999999999999999


Q ss_pred             E--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCe
Q psy16005        161 E--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRK  238 (248)
Q Consensus       161 ~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~  238 (248)
                      |  .++......+...+.+++|+|++++|++++.||.|++||+.+++.+...  .|...|.+++|+|++++|++++.||+
T Consensus       252 d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~s~d~~~l~t~s~D~~  329 (337)
T d1gxra_         252 HVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKK  329 (337)
T ss_dssp             ETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred             cccccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEc--cCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence            9  4445555567778999999999999999999999999999998875443  58899999999999999999999999


Q ss_pred             EEEEEC
Q psy16005        239 VVLYRV  244 (248)
Q Consensus       239 i~vw~~  244 (248)
                      |+|||+
T Consensus       330 I~vWdl  335 (337)
T d1gxra_         330 ATVYEV  335 (337)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999997


No 4  
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.4e-40  Score=255.96  Aligned_cols=227  Identities=13%  Similarity=0.103  Sum_probs=190.8

Q ss_pred             cCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCc--eeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCcee
Q psy16005         17 RGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPA--ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI   93 (248)
Q Consensus        17 ~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~   93 (248)
                      ..+|+|++|+|||++||+++ ++.|++||+.+++  ....+.+|.++|.+++|+|++++|++++.|++|++||+.++...
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~   86 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK   86 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccc
Confidence            46799999999999999987 8999999998775  55677899999999999999999999999999999999887766


Q ss_pred             eeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccC--------------CCCCceeEeCCCCCEEEEEcCCCeEE
Q psy16005         94 LKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPI--------------DYEPSSISLDHEHGLVAVGGADSKIS  158 (248)
Q Consensus        94 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~i~  158 (248)
                      ....+..|...|.+++|+|+++.|++++.++ +++|++..              ...+.+++|+|+++++++++.|+.++
T Consensus        87 ~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~  166 (371)
T d1k8kc_          87 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR  166 (371)
T ss_dssp             EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             cccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEE
Confidence            6667778899999999999999999999877 58887642              34567899999999999999999999


Q ss_pred             EEECCc--------------------eeeee-cccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcC
Q psy16005        159 IVENGA--------------------KVSSL-PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP  217 (248)
Q Consensus       159 ~~~~~~--------------------~~~~~-~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~  217 (248)
                      +|+...                    ..... .+...+.+++|+|++++|++++.|+.|++||+.+++.+..+. .|..+
T Consensus       167 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~  245 (371)
T d1k8kc_         167 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA-SETLP  245 (371)
T ss_dssp             EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE-CSSCC
T ss_pred             EEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeee-ccccc
Confidence            998321                    11111 234457889999999999999999999999999988765554 68889


Q ss_pred             eEEEEEcCCCcEEEEEcCCCeEEEEECC
Q psy16005        218 VTDCSFSPSNEYLVASDAHRKVVLYRVP  245 (248)
Q Consensus       218 v~~~~~s~~~~~l~~~~~d~~i~vw~~~  245 (248)
                      |.+++|+|++++|++|. |+.+++|..+
T Consensus       246 v~s~~fs~d~~~la~g~-d~~~~~~~~~  272 (371)
T d1k8kc_         246 LLAVTFITESSLVAAGH-DCFPVLFTYD  272 (371)
T ss_dssp             EEEEEEEETTEEEEEET-TSSCEEEEEE
T ss_pred             ceeeeecCCCCEEEEEc-CCceEEEEee
Confidence            99999999998887665 6777776543


No 5  
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.4e-39  Score=246.38  Aligned_cols=229  Identities=14%  Similarity=0.198  Sum_probs=193.4

Q ss_pred             ccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCce
Q psy16005         14 RTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH   92 (248)
Q Consensus        14 ~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~   92 (248)
                      .+|.+.|++++|+|++++|++|+ ||.|++||+.+++.+..+..|..+|.+++|+|+++++++|+.|+.+++|+......
T Consensus        52 ~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~  131 (340)
T d1tbga_          52 RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG  131 (340)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCS
T ss_pred             CCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccccccccc
Confidence            36999999999999999999997 99999999999999999999999999999999999999999999999999754321


Q ss_pred             ee--e-----------------------------------------eeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEE
Q psy16005         93 IL--K-----------------------------------------NEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVS  128 (248)
Q Consensus        93 ~~--~-----------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~  128 (248)
                      ..  .                                         .....+...+....+.+.+..++++..++ +++|
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~  211 (340)
T d1tbga_         132 NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW  211 (340)
T ss_dssp             CCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred             ccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEE
Confidence            10  0                                         01112345567777888888888888776 5899


Q ss_pred             EccC----------CCCCceeEeCCCCCEEEEEcCCCeEEEEEC--Cceeeeec---ccCCCceEEEcCCCCEEEEEcCC
Q psy16005        129 SLPI----------DYEPSSISLDHEHGLVAVGGADSKISIVEN--GAKVSSLP---IDYEPSSISLDHEHGLVAVGGAD  193 (248)
Q Consensus       129 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~---~~~~~~~~~~s~~~~~l~~~~~d  193 (248)
                      +++.          ...+.+++++|+++++++++.|+.+++|+.  ......+.   ....+.+++|+|++++|++|+.|
T Consensus       212 d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d  291 (340)
T d1tbga_         212 DVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD  291 (340)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETT
T ss_pred             ECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECC
Confidence            9753          456788999999999999999999999993  33444332   34557899999999999999999


Q ss_pred             CcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEE
Q psy16005        194 SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  243 (248)
Q Consensus       194 ~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~  243 (248)
                      |.|++||+.+++.+..+. +|.++|++++|+|++++|++++.||.|+|||
T Consensus       292 g~i~iwd~~~~~~~~~~~-~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         292 FNCNVWDALKADRAGVLA-GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             SCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CEEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            999999999988876554 7999999999999999999999999999997


No 6  
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=4.7e-40  Score=247.06  Aligned_cols=230  Identities=13%  Similarity=0.103  Sum_probs=188.7

Q ss_pred             ccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCcee--eeeecCCcceEEEEECcCCcEEEEEcc--CCeEEEEECC
Q psy16005         14 RTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAIS--DIYTEHSCAVNVAKYSPSGFYIASGDI--SGKVRIWDTV   88 (248)
Q Consensus        14 ~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~   88 (248)
                      ..|...|++++|+|+|++|++|+ |+.|++||+.+++..  ..+..|..+|.+++|+|++++|++++.  +..+++|+++
T Consensus        55 ~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~  134 (311)
T d1nr0a1          55 TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD  134 (311)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred             cCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccc
Confidence            45889999999999999999987 999999999887643  457789999999999999999998875  4569999999


Q ss_pred             CCceeeeeeccCCCCCeeEEEEecCCCE-EEEEeCCc-EEEEEccC----------CCCCceeEeCCCCCEEEEEcCCCe
Q psy16005         89 NKEHILKNEFHPIGGPIKDIAWSPDNQR-MISIVENG-AKVSSLPI----------DYEPSSISLDHEHGLVAVGGADSK  156 (248)
Q Consensus        89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~-~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  156 (248)
                      +++..  ..+.+|...|.+++|+|++++ +++++.++ +++|+++.          ...+.++.++|+++++++++.|+.
T Consensus       135 ~~~~~--~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~  212 (311)
T d1nr0a1         135 TGTSN--GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT  212 (311)
T ss_dssp             TCCBC--BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             ccccc--ccccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccccccc
Confidence            88754  567889999999999999986 67777766 69999763          456789999999999999999999


Q ss_pred             EEEEE--CCceeeeec--------ccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCC
Q psy16005        157 ISIVE--NGAKVSSLP--------IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS  226 (248)
Q Consensus       157 i~~~~--~~~~~~~~~--------~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~  226 (248)
                      +++||  .+.....+.        +...+.+++|+|++++|++|+.||.|+|||+++++....+...+......+.+.++
T Consensus       213 v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~  292 (311)
T d1nr0a1         213 IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT  292 (311)
T ss_dssp             EEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC
T ss_pred             ccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEec
Confidence            99999  444444443        34568899999999999999999999999999998766554333222333344445


Q ss_pred             CcEEEEEcCCCeEEEEECC
Q psy16005        227 NEYLVASDAHRKVVLYRVP  245 (248)
Q Consensus       227 ~~~l~~~~~d~~i~vw~~~  245 (248)
                      +++|++++.||.|++||.+
T Consensus       293 ~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         293 KQALVSISANGFINFVNPE  311 (311)
T ss_dssp             SSCEEEEETTCCEEEEETT
T ss_pred             CCEEEEEECCCEEEEEeCC
Confidence            6689999999999999974


No 7  
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=4.4e-40  Score=253.94  Aligned_cols=229  Identities=12%  Similarity=0.201  Sum_probs=189.6

Q ss_pred             cccCCcEEEEeCCCCCEEEEeCCcEEEEEecCCCceeeeee------------------cCCcceEEEEECcCCcEEEEE
Q psy16005         15 TQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYT------------------EHSCAVNVAKYSPSGFYIASG   76 (248)
Q Consensus        15 ~~~~~v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~~~~------------------~~~~~v~~~~~s~~~~~l~~~   76 (248)
                      .|.+.|+|++|+|||++|++|+|+.|++||+.+++....+.                  .|...|.+++|+|++++|++|
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~  139 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG  139 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceec
Confidence            48899999999999999999999999999999887765543                  456679999999999999999


Q ss_pred             ccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEcc------------------------
Q psy16005         77 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLP------------------------  131 (248)
Q Consensus        77 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~------------------------  131 (248)
                      +.||.|++||...++..  ....+|...|.++++++++..+++++.++ +++|+..                        
T Consensus       140 ~~dg~v~i~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (388)
T d1erja_         140 AEDRLIRIWDIENRKIV--MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG  217 (388)
T ss_dssp             ETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC
T ss_pred             ccccccccccccccccc--cccccccccccccccccccccccccccceeeeeeeccccccccccccccccccccccCCCC
Confidence            99999999999988754  55667888888888888888877777665 3666641                        


Q ss_pred             -----------------------------------CCCCCceeEeCCCCCEEEEEcCCCeEEEEECCc--e---------
Q psy16005        132 -----------------------------------IDYEPSSISLDHEHGLVAVGGADSKISIVENGA--K---------  165 (248)
Q Consensus       132 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~---------  165 (248)
                                                         +...+.+++++|+++++++++.|+.+++||...  .         
T Consensus       218 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~  297 (388)
T d1erja_         218 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS  297 (388)
T ss_dssp             CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------------
T ss_pred             CeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccc
Confidence                                               112456789999999999999999999998321  1         


Q ss_pred             ----eeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEE------cCCCcEEEEEcC
Q psy16005        166 ----VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSF------SPSNEYLVASDA  235 (248)
Q Consensus       166 ----~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~------s~~~~~l~~~~~  235 (248)
                          .....+...+.+++|+|++++|++|+.||.|++||+++++.+..+. +|.+.|.++++      +|++++|++++.
T Consensus       298 ~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~-~H~~~V~~~~~~~~~~~spd~~~l~s~s~  376 (388)
T d1erja_         298 GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ-GHRNSVISVAVANGSSLGPEYNVFATGSG  376 (388)
T ss_dssp             -CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSCTTCTTCEEEEEEET
T ss_pred             cceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEe-CCCCCEEEEEEecCcccCCCCCEEEEEeC
Confidence                1112345567899999999999999999999999999998876655 79999999875      678999999999


Q ss_pred             CCeEEEEECCC
Q psy16005        236 HRKVVLYRVPD  246 (248)
Q Consensus       236 d~~i~vw~~~~  246 (248)
                      ||+|+||+++.
T Consensus       377 Dg~I~iW~~~k  387 (388)
T d1erja_         377 DCKARIWKYKK  387 (388)
T ss_dssp             TSEEEEEEEEE
T ss_pred             CCEEEEEeeee
Confidence            99999999853


No 8  
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=2.2e-39  Score=241.86  Aligned_cols=236  Identities=17%  Similarity=0.213  Sum_probs=196.9

Q ss_pred             cccccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeee-cCCcceEEEEECcCCcEEEEEccCCeEEEEECC
Q psy16005         11 TLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYT-EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV   88 (248)
Q Consensus        11 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~   88 (248)
                      .+..+|.+.|++++|+|+|++|++|+ |+.|++||+.+++..+.+. .|...|++++|+|++++ ++++.|+.+++|+..
T Consensus         6 ~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~~~~~~   84 (299)
T d1nr0a2           6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLKVVPAG   84 (299)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEETTTEEEEECSS
T ss_pred             eEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeecccee-ecccceeeEEEeccC
Confidence            45567999999999999999999987 9999999999998887774 68999999999999875 556678999999987


Q ss_pred             CCcee-eeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEcc------CCCCCceeEeCCCCCEEEEEcCCCeEEEEE
Q psy16005         89 NKEHI-LKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLP------IDYEPSSISLDHEHGLVAVGGADSKISIVE  161 (248)
Q Consensus        89 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  161 (248)
                      ..... .......+...+.+++|+|+++.++++..+.+.+|+..      ......+++++|+++++++++.|+.+++||
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d  164 (299)
T d1nr0a2          85 GSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYK  164 (299)
T ss_dssp             SSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             Cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            54421 11223346778999999999999999999988888753      445678899999999999999999999999


Q ss_pred             --CCce--eeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCc--ccccCCcCeEEEEEcCCCcEEEEEcC
Q psy16005        162 --NGAK--VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK--AELDHLGPVTDCSFSPSNEYLVASDA  235 (248)
Q Consensus       162 --~~~~--~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~  235 (248)
                        .++.  .....+...+.+++|+|++++|++++.|+.|++||+.++.....  ....|...|++++|+|++++|++++.
T Consensus       165 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~  244 (299)
T d1nr0a2         165 LSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSL  244 (299)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEET
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceEEEcC
Confidence              2332  23345677899999999999999999999999999987654322  22358899999999999999999999


Q ss_pred             CCeEEEEECCCC
Q psy16005        236 HRKVVLYRVPDF  247 (248)
Q Consensus       236 d~~i~vw~~~~~  247 (248)
                      ||.|++||++++
T Consensus       245 dg~i~iwd~~~~  256 (299)
T d1nr0a2         245 DNSVIVWNMNKP  256 (299)
T ss_dssp             TSCEEEEETTCT
T ss_pred             CCEEEEEECCCC
Confidence            999999999875


No 9  
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.9e-38  Score=237.28  Aligned_cols=227  Identities=15%  Similarity=0.207  Sum_probs=184.2

Q ss_pred             ccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCce
Q psy16005         14 RTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH   92 (248)
Q Consensus        14 ~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~   92 (248)
                      .+|.+.|++++|+|++++|++++ |+.|++||+.+++....+.+|...|.+++|+|++.+++++..++.+.+|+....+.
T Consensus        14 ~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (317)
T d1vyhc1          14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC   93 (317)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE
T ss_pred             cCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccccccc
Confidence            46999999999999999999987 99999999999999999999999999999999999999999999999999887663


Q ss_pred             eeeeeccCCCCCeeEEEEecCCCEEEEEeCCcE-EEEEccC----------CCCCceeEeCCCCCEEEEEcCCCeEEEEE
Q psy16005         93 ILKNEFHPIGGPIKDIAWSPDNQRMISIVENGA-KVSSLPI----------DYEPSSISLDHEHGLVAVGGADSKISIVE  161 (248)
Q Consensus        93 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~i~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  161 (248)
                      .  ..+..|...+.++.|+|+++.+++++.++. ++|+++.          ...+..++++++++++++++.|+.+++|+
T Consensus        94 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~  171 (317)
T d1vyhc1          94 I--RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV  171 (317)
T ss_dssp             E--ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             c--cccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEe
Confidence            3  445566777777777777777777776654 6776542          23345566666666666666666666665


Q ss_pred             C----------------------------------------------------------------Cceeeeec-ccCCCc
Q psy16005        162 N----------------------------------------------------------------GAKVSSLP-IDYEPS  176 (248)
Q Consensus       162 ~----------------------------------------------------------------~~~~~~~~-~~~~~~  176 (248)
                      .                                                                ++.+..+. +...+.
T Consensus       172 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~  251 (317)
T d1vyhc1         172 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR  251 (317)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred             eccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEE
Confidence            1                                                                12222222 234567


Q ss_pred             eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEE
Q psy16005        177 SISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  243 (248)
Q Consensus       177 ~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~  243 (248)
                      +++++|++++|++|+.||.|++||+++++.+..+. +|.+.|++++|+|++++|++++.||+|+|||
T Consensus       252 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         252 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE-CCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            89999999999999999999999999998876655 7999999999999999999999999999997


No 10 
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.1e-35  Score=222.92  Aligned_cols=246  Identities=24%  Similarity=0.319  Sum_probs=189.5

Q ss_pred             CcCcceecccccccccCCcEEEEeCCCCCEEEEeCCcE--EEEEecCCC--ceeeeeecC-CcceEEEEECc--CCcEEE
Q psy16005          2 SYSNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNS--VIIRNIENP--AISDIYTEH-SCAVNVAKYSP--SGFYIA   74 (248)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--v~v~~~~~~--~~~~~~~~~-~~~v~~~~~s~--~~~~l~   74 (248)
                      +.+++.+++..|...++.+++++|+|+|+.|+++++..  ++.|+....  .....+.+| ...|++++|+|  ++++|+
T Consensus         2 ~~~l~~~~p~~p~t~~~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~la   81 (325)
T d1pgua1           2 SISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC   81 (325)
T ss_dssp             CEEEEEEECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEE
T ss_pred             ccccccccCCcCCCCCCCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEE
Confidence            34567778888888888999999999999999987554  455554332  334556677 46899999998  678999


Q ss_pred             EEccCCeEEEEECCCCceee------eeeccCCCCCeeEEEEecCCCEEEEEeCCc---EEEEEcc----------CCCC
Q psy16005         75 SGDISGKVRIWDTVNKEHIL------KNEFHPIGGPIKDIAWSPDNQRMISIVENG---AKVSSLP----------IDYE  135 (248)
Q Consensus        75 ~~~~dg~i~iwd~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~~i~~~~----------~~~~  135 (248)
                      +|+.||+|++||+..++...      ...+..|.++|.+++|+++++++++++.+.   ..+|+++          +...
T Consensus        82 sgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  161 (325)
T d1pgua1          82 SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQR  161 (325)
T ss_dssp             EEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSC
T ss_pred             EEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccc
Confidence            99999999999987654321      123456788999999999999999887532   5777754          2345


Q ss_pred             CceeEeCCCCCE-EEEEcCCCeEEEEECC--ceeeeec----ccCCCceEEEcCC-CCEEEEEcCCCcEEEEEcCCCCCC
Q psy16005        136 PSSISLDHEHGL-VAVGGADSKISIVENG--AKVSSLP----IDYEPSSISLDHE-HGLVAVGGADSKVHIYELNNKSLS  207 (248)
Q Consensus       136 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~----~~~~~~~~~~s~~-~~~l~~~~~d~~v~i~d~~~~~~~  207 (248)
                      +.+++|+|++.. +++++.|+.+++|+..  +......    +...+.+++|+|+ +.+|++++.|+.|++||+++++..
T Consensus       162 v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~  241 (325)
T d1pgua1         162 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL  241 (325)
T ss_dssp             EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred             cccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccccc
Confidence            678999998875 6789999999999943  3333332    2345789999996 579999999999999999998876


Q ss_pred             CcccccCCcCeEEEEEc---CCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        208 PKAELDHLGPVTDCSFS---PSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       208 ~~~~~~~~~~v~~~~~s---~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      ..+. +|..++..+.|+   |++++|++++.|+.|+|||+++++
T Consensus       242 ~~l~-~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~  284 (325)
T d1pgua1         242 KYIE-DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK  284 (325)
T ss_dssp             EECC-BTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTE
T ss_pred             cccc-ccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCC
Confidence            5554 566666655555   789999999999999999998764


No 11 
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=2.3e-35  Score=226.58  Aligned_cols=232  Identities=14%  Similarity=0.166  Sum_probs=183.9

Q ss_pred             ccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCcee--eeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCC
Q psy16005         14 RTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAIS--DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK   90 (248)
Q Consensus        14 ~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~   90 (248)
                      .+|.+.|.+++|+|++++|++++ |+.|++||+.++...  ..+..|...|.+++|+|+++.|++++.|+.+++|++...
T Consensus        48 ~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~  127 (371)
T d1k8kc_          48 KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE  127 (371)
T ss_dssp             ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETT
T ss_pred             cCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeecc
Confidence            35889999999999999999987 999999999876644  345578899999999999999999999999999998765


Q ss_pred             cee--eeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccC----------------------------CCCCcee
Q psy16005         91 EHI--LKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPI----------------------------DYEPSSI  139 (248)
Q Consensus        91 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~----------------------------~~~~~~~  139 (248)
                      ...  .......|...|.+++|+|++++|++++.++ +++|+...                            ...+.++
T Consensus       128 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  207 (371)
T d1k8kc_         128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV  207 (371)
T ss_dssp             TTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE
T ss_pred             cccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEE
Confidence            432  3344567889999999999999999998777 59998632                            1235678


Q ss_pred             EeCCCCCEEEEEcCCCeEEEEE--CCceeeeecc-cCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCC---------
Q psy16005        140 SLDHEHGLVAVGGADSKISIVE--NGAKVSSLPI-DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLS---------  207 (248)
Q Consensus       140 ~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~---------  207 (248)
                      +|+|+++.+++++.|+.|++||  .++.+..+.. ..++.+++|+|++++|++|. |+.+++|........         
T Consensus       208 ~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~  286 (371)
T d1k8kc_         208 CFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDV  286 (371)
T ss_dssp             EECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCC
T ss_pred             EeecccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecC
Confidence            9999999999999999999999  5556665554 45689999999998888766 676666654332100         


Q ss_pred             -------------------------------CcccccCCcCeEEEEEcCCC----cEEEEEcCCCeEEEEECCC
Q psy16005        208 -------------------------------PKAELDHLGPVTDCSFSPSN----EYLVASDAHRKVVLYRVPD  246 (248)
Q Consensus       208 -------------------------------~~~~~~~~~~v~~~~~s~~~----~~l~~~~~d~~i~vw~~~~  246 (248)
                                                     ......|.+.|+++++.|.+    ..++|++.||.|++||+++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         287 PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             C--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             ccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence                                           00011388899999998754    3689999999999999864


No 12 
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=8.1e-34  Score=214.20  Aligned_cols=231  Identities=10%  Similarity=0.084  Sum_probs=177.2

Q ss_pred             ccccccCCcEEEEeCC--CCCEEEEeC-CcEEEEEecCCCcee--------eeeecCCcceEEEEECcCCcEEEEEc--c
Q psy16005         12 LPRTQRGQPIVLGGDP--KGKNFLYTN-GNSVIIRNIENPAIS--------DIYTEHSCAVNVAKYSPSGFYIASGD--I   78 (248)
Q Consensus        12 ~~~~~~~~v~~~~~s~--~~~~l~~~~-~~~v~v~~~~~~~~~--------~~~~~~~~~v~~~~~s~~~~~l~~~~--~   78 (248)
                      +..++...|++++|+|  +|++|++++ ||+|++||+..++..        ..+..|.++|.+++|+++++++++++  .
T Consensus        58 ~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~  137 (325)
T d1pgua1          58 FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR  137 (325)
T ss_dssp             ECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS
T ss_pred             EeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccc
Confidence            3334457899999998  567999886 999999998765432        23456888999999999999988765  4


Q ss_pred             CCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCE-EEEEeCCc-EEEEEccC-------------CCCCceeEeCC
Q psy16005         79 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR-MISIVENG-AKVSSLPI-------------DYEPSSISLDH  143 (248)
Q Consensus        79 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~-~~i~~~~~-------------~~~~~~~~~~~  143 (248)
                      ++.+++|+.++++.+  ..+.+|...|.+++|+|++++ +++++.++ +++|++..             ...+.+++|+|
T Consensus       138 ~~~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~p  215 (325)
T d1pgua1         138 DNFGVFISWDSGNSL--GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP  215 (325)
T ss_dssp             SCSEEEEETTTCCEE--EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS
T ss_pred             cceEEEEeecccccc--eeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeecc
Confidence            678999999988754  567789999999999999876 56677666 58898642             23467899999


Q ss_pred             C-CCEEEEEcCCCeEEEEE--CCceeeeec-ccCCCceEEEc---CCCCEEEEEcCCCcEEEEEcCCCCCCCcccc-cCC
Q psy16005        144 E-HGLVAVGGADSKISIVE--NGAKVSSLP-IDYEPSSISLD---HEHGLVAVGGADSKVHIYELNNKSLSPKAEL-DHL  215 (248)
Q Consensus       144 ~-~~~~~~~~~~~~i~~~~--~~~~~~~~~-~~~~~~~~~~s---~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~-~~~  215 (248)
                      + +.++++++.|+.|++||  .++.+..+. +...+..+.|+   |++++|++++.|+.|+|||+++++.+..+.. .+.
T Consensus       216 d~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~  295 (325)
T d1pgua1         216 DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ  295 (325)
T ss_dssp             TTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC
T ss_pred             ccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCc
Confidence            6 67899999999999999  556666665 34445555555   7899999999999999999999887655442 233


Q ss_pred             cCeEEEEEcCC-CcEEEEEcCCCeEEEEEC
Q psy16005        216 GPVTDCSFSPS-NEYLVASDAHRKVVLYRV  244 (248)
Q Consensus       216 ~~v~~~~~s~~-~~~l~~~~~d~~i~vw~~  244 (248)
                      ..+..+++.+. +.+|++++.||.|++||+
T Consensus       296 ~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         296 LGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             GGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             ccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            33444444433 347899999999999996


No 13 
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=2.8e-33  Score=211.45  Aligned_cols=198  Identities=15%  Similarity=0.214  Sum_probs=166.8

Q ss_pred             ceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcE-EE
Q psy16005         49 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGA-KV  127 (248)
Q Consensus        49 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~i  127 (248)
                      +..+++++|.++|++++|+|++++|++|+.||+|++||+.+++.+  ..+..|...|.+++|+|+++++++++.++. .+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~--~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~  123 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV--HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI  123 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE--EEEECSCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeE--EEEecccccEEeeEeeccceeeeeecccceeec
Confidence            456778899999999999999999999999999999999998855  567788999999999999999999987764 66


Q ss_pred             EEccC-------------------------------------------------------CCCCceeEeCCCCCEEEEEc
Q psy16005        128 SSLPI-------------------------------------------------------DYEPSSISLDHEHGLVAVGG  152 (248)
Q Consensus       128 ~~~~~-------------------------------------------------------~~~~~~~~~~~~~~~~~~~~  152 (248)
                      |+...                                                       ...+....+.+.+.+++++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (340)
T d1tbga_         124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA  203 (340)
T ss_dssp             EESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             ccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEee
Confidence            66411                                                       12234556677888999999


Q ss_pred             CCCeEEEEE--CCceeeeec-ccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCccc-ccCCcCeEEEEEcCCCc
Q psy16005        153 ADSKISIVE--NGAKVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDHLGPVTDCSFSPSNE  228 (248)
Q Consensus       153 ~~~~i~~~~--~~~~~~~~~-~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~  228 (248)
                      .|+.+++||  .++.+..+. +...+.+++|+|++++|++|+.|+.|++||++..+...... ..+...|.+++|+|+++
T Consensus       204 ~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  283 (340)
T d1tbga_         204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR  283 (340)
T ss_dssp             TTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSC
T ss_pred             cCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCC
Confidence            999999999  555666655 46678999999999999999999999999999877654332 24677899999999999


Q ss_pred             EEEEEcCCCeEEEEECCCCC
Q psy16005        229 YLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       229 ~l~~~~~d~~i~vw~~~~~~  248 (248)
                      +|++++.||.|++||+.+++
T Consensus       284 ~l~~g~~dg~i~iwd~~~~~  303 (340)
T d1tbga_         284 LLLAGYDDFNCNVWDALKAD  303 (340)
T ss_dssp             EEEEEETTSCEEEEETTTCC
T ss_pred             EEEEEECCCEEEEEECCCCc
Confidence            99999999999999998764


No 14 
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.2e-32  Score=207.23  Aligned_cols=228  Identities=18%  Similarity=0.165  Sum_probs=184.4

Q ss_pred             cccCCc-EEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCce
Q psy16005         15 TQRGQP-IVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH   92 (248)
Q Consensus        15 ~~~~~v-~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~   92 (248)
                      +|...| +|+++  ++++|++|+ |+.|++||+.+++.+..+.+|.++|.+++|+|+ .+|++|+.||+|++|+....+.
T Consensus        10 GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~   86 (355)
T d1nexb2          10 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCC   86 (355)
T ss_dssp             CCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEE
T ss_pred             CcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccccccccc
Confidence            476665 56655  688999987 999999999999999999999999999999986 5799999999999999998876


Q ss_pred             eeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccCCCC-------------------------------CceeE
Q psy16005         93 ILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPIDYE-------------------------------PSSIS  140 (248)
Q Consensus        93 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~~~~-------------------------------~~~~~  140 (248)
                      ........+........+.++++.+++++.++ +++|++.....                               .....
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  166 (355)
T d1nexb2          87 THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT  166 (355)
T ss_dssp             EEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEE
T ss_pred             ccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccc
Confidence            65444444455566777889999999999877 49999753211                               11223


Q ss_pred             eCCCCCEEEEEcCCCeEEEEE--CCceeeeec-ccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcC
Q psy16005        141 LDHEHGLVAVGGADSKISIVE--NGAKVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP  217 (248)
Q Consensus       141 ~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~-~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~  217 (248)
                      ..+++++++.+..|+.+++||  .++.+.... ....+.++.++|++.++++++.|+.|++||.+++.....+. +|...
T Consensus       167 ~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~  245 (355)
T d1nexb2         167 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ-GHTAL  245 (355)
T ss_dssp             EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC-CCSSC
T ss_pred             cccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccc-ccccc
Confidence            456788999999999999999  444444443 45557889999999999999999999999999988766554 79999


Q ss_pred             eEEEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        218 VTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       218 v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      |.+++|++  ++|++++.||.|++||+++++
T Consensus       246 v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~  274 (355)
T d1nexb2         246 VGLLRLSD--KFLVSAAADGSIRGWDANDYS  274 (355)
T ss_dssp             CCEEEECS--SEEEEECTTSEEEEEETTTCC
T ss_pred             cccccccc--ceeeeeecccccccccccccc
Confidence            99999864  689999999999999998753


No 15 
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=1.2e-32  Score=205.19  Aligned_cols=197  Identities=25%  Similarity=0.369  Sum_probs=165.5

Q ss_pred             CceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEE
Q psy16005         48 PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKV  127 (248)
Q Consensus        48 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i  127 (248)
                      |+..+.+.+|.++|++++|+|++++|++|+.||+|++||+++++... .....|...|.+++|+|++++++++.++.+++
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~-~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~   80 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR-VFPDVHATMITGIKTTSKGDLFTVSWDDHLKV   80 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-CSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE-EEcCCCCCcEEEEEeeccceeecccceeeEEE
Confidence            56678889999999999999999999999999999999999887542 22356889999999999999888777888899


Q ss_pred             EEccC-------------CCCCceeEeCCCCCEEEEEcCCCeEEEEECCceeeeecccCCCceEEEcCCCCEEEEEcCCC
Q psy16005        128 SSLPI-------------DYEPSSISLDHEHGLVAVGGADSKISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS  194 (248)
Q Consensus       128 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~  194 (248)
                      |+...             ...+..++++++++.++++. ++.+.+|+..+... ......+.+++++|++++|++|+.|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~dg  158 (299)
T d1nr0a2          81 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKLTE-VPISYNSSCVALSNDKQFVAVGGQDS  158 (299)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEEEE-EECSSCEEEEEECTTSCEEEEEETTS
T ss_pred             eccCCccccccccccccccccccccccccccccccccc-cccccccccccccc-cccccccccccccccccccccccccc
Confidence            98642             23456788999998776654 56899999665443 44566778999999999999999999


Q ss_pred             cEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCCC
Q psy16005        195 KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF  247 (248)
Q Consensus       195 ~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~  247 (248)
                      .|++||+++++........|...|++++|+|++++|++++.|+.|++||+.++
T Consensus       159 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~  211 (299)
T d1nr0a2         159 KVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN  211 (299)
T ss_dssp             EEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999887654445578999999999999999999999999999998654


No 16 
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.4e-32  Score=203.68  Aligned_cols=228  Identities=13%  Similarity=0.148  Sum_probs=169.6

Q ss_pred             ccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCce
Q psy16005         14 RTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH   92 (248)
Q Consensus        14 ~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~   92 (248)
                      .+|.+.|.+ +++++|++|++|+ |+.|+|||+.++++++.+.+|...|.+++|+|+  +|++++.|+.+++|+......
T Consensus        13 ~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~   89 (342)
T d2ovrb2          13 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGEC   89 (342)
T ss_dssp             ECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEE
T ss_pred             CCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccccccccccc
Confidence            368888865 4667899999987 999999999999999999999999999999875  899999999999998754321


Q ss_pred             ee------------------------------------------------------------------------------
Q psy16005         93 IL------------------------------------------------------------------------------   94 (248)
Q Consensus        93 ~~------------------------------------------------------------------------------   94 (248)
                      ..                                                                              
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~  169 (342)
T d2ovrb2          90 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC  169 (342)
T ss_dssp             EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEE
T ss_pred             eecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeeccccee
Confidence            00                                                                              


Q ss_pred             eeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccCCCC--------CceeEeCCCCCEEEEEcCCCeEEEEEC--C
Q psy16005         95 KNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPIDYE--------PSSISLDHEHGLVAVGGADSKISIVEN--G  163 (248)
Q Consensus        95 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~--~  163 (248)
                      ...+.+|..  ....+.++++++++++.++ +++|+++....        ....+++++++++++++.|+.|++||.  .
T Consensus       170 ~~~~~~~~~--~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~  247 (342)
T d2ovrb2         170 LHTLQGHTN--RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG  247 (342)
T ss_dssp             EEEECCCSS--CEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred             eEEEcCccc--ccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcCCCEEEEEecccc
Confidence            001112222  2344556788888888776 58999764322        222344556679999999999999993  3


Q ss_pred             ceeeeeccc--CCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCccc----ccCCcCeEEEEEcCCCcEEEEEcCCC
Q psy16005        164 AKVSSLPID--YEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE----LDHLGPVTDCSFSPSNEYLVASDAHR  237 (248)
Q Consensus       164 ~~~~~~~~~--~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~d~  237 (248)
                      +....+...  ......+++++++++++|+.||.|++||+++++.+..+.    .+|.+.|++++|+|++.+|++|+.||
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dG  327 (342)
T d2ovrb2         248 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG  327 (342)
T ss_dssp             CEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred             cccccccccceeeeceeecccCCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence            344444321  122334455567799999999999999999998765443    24778899999999999999999888


Q ss_pred             e----EEEEECCC
Q psy16005        238 K----VVLYRVPD  246 (248)
Q Consensus       238 ~----i~vw~~~~  246 (248)
                      +    |++||++.
T Consensus       328 t~~~~l~~~Df~~  340 (342)
T d2ovrb2         328 TEETKLLVLDFDV  340 (342)
T ss_dssp             SSCCEEEEEECCC
T ss_pred             CCeeEEEEEeCCC
Confidence            4    99999863


No 17 
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.8e-31  Score=200.85  Aligned_cols=237  Identities=12%  Similarity=0.124  Sum_probs=176.9

Q ss_pred             cccccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceee---eeecCCcceEEEEECcC-CcEEEEEccCCeEEEE
Q psy16005         11 TLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISD---IYTEHSCAVNVAKYSPS-GFYIASGDISGKVRIW   85 (248)
Q Consensus        11 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~---~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw   85 (248)
                      .+...|...|++++|+|++++|++++ |++|+|||++++....   ...+|..+|.+++|+|+ +.+|++|+.||.|++|
T Consensus         5 ~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w   84 (342)
T d1yfqa_           5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV   84 (342)
T ss_dssp             ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred             EcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeee
Confidence            36678999999999999999999987 9999999997755432   23379999999999986 5689999999999999


Q ss_pred             ECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccCC----------------CCCceeEeCCCCCEE
Q psy16005         86 DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPID----------------YEPSSISLDHEHGLV  148 (248)
Q Consensus        86 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~~----------------~~~~~~~~~~~~~~~  148 (248)
                      ++.......... ..+........+.++...+++++.++ +++|+++..                .......+.+.+..+
T Consensus        85 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (342)
T d1yfqa_          85 DLIGSPSFQALT-NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL  163 (342)
T ss_dssp             CSSSSSSEEECB-SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred             eccccccccccc-ccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCce
Confidence            998876543222 22334445556677788888888776 599987422                123345667788899


Q ss_pred             EEEcCCCeEEEEECC--cee----eeecccCCCceEEEc-CCCCEEEEEcCCCcEEEEEcCCCCCCCc------------
Q psy16005        149 AVGGADSKISIVENG--AKV----SSLPIDYEPSSISLD-HEHGLVAVGGADSKVHIYELNNKSLSPK------------  209 (248)
Q Consensus       149 ~~~~~~~~i~~~~~~--~~~----~~~~~~~~~~~~~~s-~~~~~l~~~~~d~~v~i~d~~~~~~~~~------------  209 (248)
                      ++++.|+.+++|+..  ...    ..........+..+. +++..+++++.||.+.+|+.........            
T Consensus       164 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T d1yfqa_         164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL  243 (342)
T ss_dssp             EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred             eeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeee
Confidence            999999999999932  211    111223334444444 4677999999999999999875432211            


Q ss_pred             --ccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        210 --AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       210 --~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                        ....|...|++++|+|++++|++|+.||.|++||+++++
T Consensus       244 ~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~  284 (342)
T d1yfqa_         244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK  284 (342)
T ss_dssp             CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred             ccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCc
Confidence              112466789999999999999999999999999998763


No 18 
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=6.1e-32  Score=208.93  Aligned_cols=235  Identities=13%  Similarity=0.147  Sum_probs=172.0

Q ss_pred             cccccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCce------eeeeecCCcceEEEE------ECc-CCcEEEEE
Q psy16005         11 TLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAI------SDIYTEHSCAVNVAK------YSP-SGFYIASG   76 (248)
Q Consensus        11 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~------~~~~~~~~~~v~~~~------~s~-~~~~l~~~   76 (248)
                      ....+|.+.|.++++++  +++++++ |+.|++||..+.+.      ......|...+..+.      .+. ++.+++++
T Consensus         8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~   85 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT   85 (393)
T ss_dssp             EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEE
Confidence            45678999999999875  5888886 99999999776432      112223443333222      222 34578899


Q ss_pred             ccCCeEEEEECCCCceeee--------eeccCCCCCeeEEEEecC-----CCEEEEEeCCc-EEEEEccC----------
Q psy16005         77 DISGKVRIWDTVNKEHILK--------NEFHPIGGPIKDIAWSPD-----NQRMISIVENG-AKVSSLPI----------  132 (248)
Q Consensus        77 ~~dg~i~iwd~~~~~~~~~--------~~~~~~~~~v~~~~~~~~-----~~~l~~~~~~~-~~i~~~~~----------  132 (248)
                      +.||.|++|++........        .....+...+..++|.++     +.++++++.++ +.+|++..          
T Consensus        86 ~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~  165 (393)
T d1sq9a_          86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL  165 (393)
T ss_dssp             ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred             eCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeee
Confidence            9999999999765432111        111223456778888775     35777777665 68998731          


Q ss_pred             ------------------CCCCceeEeCCCCCEEEEEcCCCeEEEEE--CCceeeeec-------ccCCCceEEEcCCCC
Q psy16005        133 ------------------DYEPSSISLDHEHGLVAVGGADSKISIVE--NGAKVSSLP-------IDYEPSSISLDHEHG  185 (248)
Q Consensus       133 ------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~-------~~~~~~~~~~s~~~~  185 (248)
                                        ...+.+++++|++ ++++|+.|+.|++||  .++.+..+.       +...+.+++|+|+|+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~  244 (393)
T d1sq9a_         166 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS  244 (393)
T ss_dssp             CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred             eeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccc
Confidence                              1235678999987 889999999999999  344444332       456789999999999


Q ss_pred             EEEEEcCCCc---EEEEEcCCCCCCCcc------------cccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        186 LVAVGGADSK---VHIYELNNKSLSPKA------------ELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       186 ~l~~~~~d~~---v~i~d~~~~~~~~~~------------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      +|++|+.|++   |++||+++++.+..+            ..+|.+.|++++|+||+++|++++.|++|++||+++++
T Consensus       245 ~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~  322 (393)
T d1sq9a_         245 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE  322 (393)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred             eeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCC
Confidence            9999998874   999999987654332            23699999999999999999999999999999998874


No 19 
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=6e-32  Score=200.22  Aligned_cols=226  Identities=18%  Similarity=0.157  Sum_probs=168.8

Q ss_pred             eecccccccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEE
Q psy16005          7 YIFATLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW   85 (248)
Q Consensus         7 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw   85 (248)
                      +++..+. +|.++|++++|+|    |++|+ ||.|++||+.++     ...|...|.++++++++ .+++++.|+++++|
T Consensus         4 ~~i~~l~-gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w   72 (287)
T d1pgua2           4 EVLKTIS-GHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVN   72 (287)
T ss_dssp             EEEEEEC-CCSSCEEEEETTT----TEEEETTSCEEETTTTEE-----ECCCCSCEEEEECCSTT-CCEEEETTTEEEET
T ss_pred             ceeEEEC-CCCCceEEEEECc----EEEEeCCCeEEEEECCCC-----CCCCCCCEEEEEecCCC-eEEEEeeccccccc
Confidence            4555664 5999999999998    77776 999999998754     35789999999998764 57889999999999


Q ss_pred             ECCCCcee---ee------------------eeccCC--------CCCeeEEEEecCCCEEEEEeCCc--EEEEEcc---
Q psy16005         86 DTVNKEHI---LK------------------NEFHPI--------GGPIKDIAWSPDNQRMISIVENG--AKVSSLP---  131 (248)
Q Consensus        86 d~~~~~~~---~~------------------~~~~~~--------~~~v~~~~~~~~~~~l~~~~~~~--~~i~~~~---  131 (248)
                      ++...+..   ..                  ..+...        .......++++++..+++++.++  +++|++.   
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~  152 (287)
T d1pgua2          73 GITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLE  152 (287)
T ss_dssp             TEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEE
T ss_pred             cccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccc
Confidence            86532100   00                  000000        01122346677888888887654  6888863   


Q ss_pred             --------CCCCCceeEeCCCCCEEEEEcCCCeEEEEECCc--eeee-e-cccCCCceEEEcCC----------CCEEEE
Q psy16005        132 --------IDYEPSSISLDHEHGLVAVGGADSKISIVENGA--KVSS-L-PIDYEPSSISLDHE----------HGLVAV  189 (248)
Q Consensus       132 --------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~-~-~~~~~~~~~~~s~~----------~~~l~~  189 (248)
                              ....+.+++|+|++.++++++.|+.|++||...  .... + .+...+.+++|+|+          +.+|++
T Consensus       153 ~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~s  232 (287)
T d1pgua2         153 VSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT  232 (287)
T ss_dssp             EEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEE
T ss_pred             eeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEe
Confidence                    235578899999999999999999999999433  2222 2 24566889999874          468999


Q ss_pred             EcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEEC
Q psy16005        190 GGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  244 (248)
Q Consensus       190 ~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~  244 (248)
                      |+.|+.|++||+++.........+|...|++++|+|++ .|++++.|+.|++|++
T Consensus       233 gs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         233 GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             ecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence            99999999999987655445555799999999999986 5888999999999996


No 20 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=100.00  E-value=6e-31  Score=200.23  Aligned_cols=175  Identities=7%  Similarity=0.035  Sum_probs=139.9

Q ss_pred             EEEeCC-CCCEEEEeCCcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCC--eEEEEECCCCceeeeeec
Q psy16005         22 VLGGDP-KGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG--KVRIWDTVNKEHILKNEF   98 (248)
Q Consensus        22 ~~~~s~-~~~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~   98 (248)
                      +-.||| ||+++++++++.|++||+..++..+ + .|...|.+++|+|||++|++++.+.  .|++||.++++.   ..+
T Consensus         7 ~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~---~~~   81 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA---EKF   81 (360)
T ss_dssp             EEEEEECGGGCEEEEETTEEEEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE---EEC
T ss_pred             cccccCCCCCEEEEEECCeEEEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE---EEe
Confidence            467999 9999999999999999998877665 3 6899999999999999998876553  799999998764   356


Q ss_pred             cCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccC----------CCCCceeEeCCCCCEEEEEc----------CCCeE
Q psy16005         99 HPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPI----------DYEPSSISLDHEHGLVAVGG----------ADSKI  157 (248)
Q Consensus        99 ~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~----------~~~~i  157 (248)
                      ..|...+.+++|+||+++|++++.++ +.+|++..          .....+++|+|++++++.+.          .++.+
T Consensus        82 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~  161 (360)
T d1k32a3          82 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI  161 (360)
T ss_dssp             CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred             eCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccce
Confidence            67889999999999999999998877 58888753          24467889999999988543          34568


Q ss_pred             EEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEc
Q psy16005        158 SIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYEL  201 (248)
Q Consensus       158 ~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~  201 (248)
                      ++|+  .++.............++|+|||+.|++++.++.+.+||.
T Consensus       162 ~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~  207 (360)
T d1k32a3         162 HVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR  207 (360)
T ss_dssp             EEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred             eeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEcccc
Confidence            8898  3333333445555677889999999998888888877764


No 21 
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.7e-30  Score=193.72  Aligned_cols=199  Identities=14%  Similarity=0.217  Sum_probs=163.9

Q ss_pred             CceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcE-E
Q psy16005         48 PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGA-K  126 (248)
Q Consensus        48 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~  126 (248)
                      ......+++|.++|++++|+|++++|++|+.||+|++||+.+++.+  ..+.+|...|.+++|+|++..++++..++. .
T Consensus         7 ~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~--~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~   84 (317)
T d1vyhc1           7 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKLLASCSADMTIK   84 (317)
T ss_dssp             SSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC--EEECCCSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred             CCccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEE--EEEeCCCCcEEEEeeecccccccccccccccc
Confidence            3445678899999999999999999999999999999999998854  667889999999999999999999987764 5


Q ss_pred             EEEcc----------CCCCCceeEeCCCCCEEEEEcCCCeEEEEE--CCceeeeec-ccCCCceEEEcCCCCEEEEEcCC
Q psy16005        127 VSSLP----------IDYEPSSISLDHEHGLVAVGGADSKISIVE--NGAKVSSLP-IDYEPSSISLDHEHGLVAVGGAD  193 (248)
Q Consensus       127 i~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~-~~~~~~~~~~s~~~~~l~~~~~d  193 (248)
                      .|+..          .......+.++++++.+++++.|+.+++|+  .++....+. +...+.+++++|++.+|++++.|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d  164 (317)
T d1vyhc1          85 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND  164 (317)
T ss_dssp             EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCC
Confidence            55543          244567788999999999999999999999  455555554 45567888999999999999999


Q ss_pred             CcEEEEEcCCCCCCC-------------------------------------------------------------cccc
Q psy16005        194 SKVHIYELNNKSLSP-------------------------------------------------------------KAEL  212 (248)
Q Consensus       194 ~~v~i~d~~~~~~~~-------------------------------------------------------------~~~~  212 (248)
                      +.|++|+..+++...                                                             ....
T Consensus       165 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~  244 (317)
T d1vyhc1         165 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV  244 (317)
T ss_dssp             SCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             CeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEe
Confidence            999999876543211                                                             0012


Q ss_pred             cCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        213 DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       213 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      +|...|.+++|+|++++|++++.||.|++||+++++
T Consensus       245 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  280 (317)
T d1vyhc1         245 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR  280 (317)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred             CCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCc
Confidence            477889999999999999999999999999998764


No 22 
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.98  E-value=4.3e-30  Score=189.57  Aligned_cols=221  Identities=17%  Similarity=0.225  Sum_probs=161.1

Q ss_pred             ccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCce
Q psy16005         14 RTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH   92 (248)
Q Consensus        14 ~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~   92 (248)
                      ..|...|+|++|  ||++|++|+ |+.|+|||+.+++.+..+.+|.+.|.+++|  ++++|++|+.||.|++|++..+..
T Consensus        12 ~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~   87 (293)
T d1p22a2          12 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM   87 (293)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred             CCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccccc
Confidence            346677888765  789999987 999999999999999999999999999987  567999999999999999876642


Q ss_pred             eee-----------------------------------------eeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEc
Q psy16005         93 ILK-----------------------------------------NEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSL  130 (248)
Q Consensus        93 ~~~-----------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~  130 (248)
                      ...                                         ..+..|...+..+.+.  ...+++++.++ +++|++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~  165 (293)
T d1p22a2          88 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNT  165 (293)
T ss_dssp             EEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEET
T ss_pred             cccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecC
Confidence            211                                         1112334444444443  34555666555 588887


Q ss_pred             cCCCCC--------ceeEeCCCCCEEEEEcCCCeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEE
Q psy16005        131 PIDYEP--------SSISLDHEHGLVAVGGADSKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYE  200 (248)
Q Consensus       131 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d  200 (248)
                      .....+        ....+.+++..+++++.|+.|++||  ..+.+........ ....+++++.+|++|+.||.|++||
T Consensus       166 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~l~sg~~dg~i~iwd  244 (293)
T d1p22a2         166 STCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIVSGAYDGKIKVWD  244 (293)
T ss_dssp             TTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEECCSSEEEEEETTSCEEEEE
T ss_pred             CCCcEEEEEcccccccccccCCCCeEEEecCCCEEEEEecccceeeeeecccce-eeeeccccceEEEEEcCCCEEEEEE
Confidence            644322        1223445677999999999999999  4444444443322 2345677889999999999999999


Q ss_pred             cCCCCCC--------CcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEE
Q psy16005        201 LNNKSLS--------PKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  243 (248)
Q Consensus       201 ~~~~~~~--------~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~  243 (248)
                      +.+....        .....+|.+.|++++|+  +++|++++.||+|++||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         245 LVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             HHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             CCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            8653321        11223699999999994  57899999999999997


No 23 
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.98  E-value=5.4e-30  Score=197.06  Aligned_cols=215  Identities=16%  Similarity=0.254  Sum_probs=167.2

Q ss_pred             EEEeCCcEEEEEecCCCcee----eeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeee-----------
Q psy16005         32 FLYTNGNSVIIRNIENPAIS----DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN-----------   96 (248)
Q Consensus        32 l~~~~~~~v~v~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----------   96 (248)
                      +-...++...+|+....+..    ....+|.+.|++++|+|||++|++|+ |+.|++||+.+++.+...           
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~  110 (388)
T d1erja_          32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPE  110 (388)
T ss_dssp             SEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC---------
T ss_pred             cccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeeccccccccccc
Confidence            33345778889987654322    22237999999999999999999987 899999999887754322           


Q ss_pred             -----eccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccC----------CCCCceeEeCCCCCEEEEEcCCCeEEEE
Q psy16005         97 -----EFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPI----------DYEPSSISLDHEHGLVAVGGADSKISIV  160 (248)
Q Consensus        97 -----~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~  160 (248)
                           ....|...|.+++|+|++++|++++.++ +++|+...          ...+..+.+++++..+++++.++.+++|
T Consensus       111 ~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~  190 (388)
T d1erja_         111 NLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW  190 (388)
T ss_dssp             --------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeee
Confidence                 1234677899999999999999999887 58998753          4567788999999999999999999999


Q ss_pred             EC--CceeeeecccCCCceEEEcC-CCCEEEEEcCCCcEEEEEcCCCCCCCcc------cccCCcCeEEEEEcCCCcEEE
Q psy16005        161 EN--GAKVSSLPIDYEPSSISLDH-EHGLVAVGGADSKVHIYELNNKSLSPKA------ELDHLGPVTDCSFSPSNEYLV  231 (248)
Q Consensus       161 ~~--~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~------~~~~~~~v~~~~~s~~~~~l~  231 (248)
                      |.  ..............++.+.| ++.+|++|+.|+.|++||.+++......      ..+|...|.+++|+|++++|+
T Consensus       191 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~  270 (388)
T d1erja_         191 DLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV  270 (388)
T ss_dssp             ETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE
T ss_pred             eccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEE
Confidence            93  33444444455555666655 8889999999999999999987654332      225888999999999999999


Q ss_pred             EEcCCCeEEEEECCCC
Q psy16005        232 ASDAHRKVVLYRVPDF  247 (248)
Q Consensus       232 ~~~~d~~i~vw~~~~~  247 (248)
                      +++.||.|++||+.++
T Consensus       271 s~~~d~~i~iwd~~~~  286 (388)
T d1erja_         271 SGSLDRSVKLWNLQNA  286 (388)
T ss_dssp             EEETTSEEEEEEC---
T ss_pred             EEECCCcEEEEeccCC
Confidence            9999999999998764


No 24 
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97  E-value=4.2e-28  Score=183.45  Aligned_cols=232  Identities=13%  Similarity=0.170  Sum_probs=168.3

Q ss_pred             eecccccccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecC--CcceEEEEECcCCcEEEEEccCCeEE
Q psy16005          7 YIFATLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEH--SCAVNVAKYSPSGFYIASGDISGKVR   83 (248)
Q Consensus         7 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~   83 (248)
                      +.+..+. .|.+.|.+++|+|++ +|++++ |+.|++|+....+........  ........++++++++++++.|+.|+
T Consensus        44 ~~~~~l~-~H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  121 (355)
T d1nexb2          44 KFLLQLS-GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH  121 (355)
T ss_dssp             EEEEEEE-CCSSCEEEEEEETTT-EEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred             cEEEEEE-CCCCCEEEEEEcCCC-EEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEE
Confidence            3444553 588999999999975 666665 999999999887766554433  33455666778888899999999999


Q ss_pred             EEECCCCcee-------------------------------------------------------------eeeeccCCC
Q psy16005         84 IWDTVNKEHI-------------------------------------------------------------LKNEFHPIG  102 (248)
Q Consensus        84 iwd~~~~~~~-------------------------------------------------------------~~~~~~~~~  102 (248)
                      +||+.+....                                                             .......+.
T Consensus       122 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~  201 (355)
T d1nexb2         122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT  201 (355)
T ss_dssp             EEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred             EEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeeccc
Confidence            9987643210                                                             001123355


Q ss_pred             CCeeEEEEecCCCEEEEEeCCc-EEEEEccC----------CCCCceeEeCCCCCEEEEEcCCCeEEEEECCceeeeec-
Q psy16005        103 GPIKDIAWSPDNQRMISIVENG-AKVSSLPI----------DYEPSSISLDHEHGLVAVGGADSKISIVENGAKVSSLP-  170 (248)
Q Consensus       103 ~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-  170 (248)
                      ..+.++.|+|+++.+++++.++ +++|+++.          ...+.++.++  ++++++++.|+.|++||.......+. 
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~  279 (355)
T d1nexb2         202 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY  279 (355)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             cccccccccccceeeecccccceEEeeeccccccccccccccccccccccc--cceeeeeecccccccccccccceeccc
Confidence            6778888999999999988776 58888753          3445666665  57999999999999999554444333 


Q ss_pred             ccCCCce-EEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEEC
Q psy16005        171 IDYEPSS-ISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  244 (248)
Q Consensus       171 ~~~~~~~-~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~  244 (248)
                      +...+.+ ..+++++.++++|+ |+.|++||+++++.+.....+|.+.|.+++|+|+ ..+++++.||.++||.+
T Consensus       280 ~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         280 HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             ECTTCCCCCEEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred             ccCCceEEEEEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence            3334444 45677887777665 8999999999999876666689999999999986 57788899998766543


No 25 
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.5e-28  Score=185.00  Aligned_cols=197  Identities=18%  Similarity=0.231  Sum_probs=149.2

Q ss_pred             EecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeC
Q psy16005         43 RNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVE  122 (248)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  122 (248)
                      |+..+.+..+.+++|.+.|.+ +++++|++|+||+.||+|+|||+.+++.+  ..+.+|...|.+++|+|+  +|++++.
T Consensus         1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~--~~~~~h~~~V~~v~~~~~--~l~s~s~   75 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL--RTLVGHTGGVWSSQMRDN--IIISGST   75 (342)
T ss_dssp             HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEE--EECCCCSSCEEEEEEETT--EEEEEET
T ss_pred             CCCCCCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEE--EEEeCCCCCEEEEEeCCC--cccccee
Confidence            555666777889999999865 36678999999999999999999998854  678899999999999874  8888887


Q ss_pred             CcE-EEEEccC---------------------------------------------------------------------
Q psy16005        123 NGA-KVSSLPI---------------------------------------------------------------------  132 (248)
Q Consensus       123 ~~~-~i~~~~~---------------------------------------------------------------------  132 (248)
                      ++. ++|+...                                                                     
T Consensus        76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (342)
T d2ovrb2          76 DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAY  155 (342)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEET
T ss_pred             cccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecC
Confidence            764 6665310                                                                     


Q ss_pred             -------------------CCCCceeEeCCCCCEEEEEcCCCeEEEEE--CCceeeeecc-cCCCceEEEcCCCCEEEEE
Q psy16005        133 -------------------DYEPSSISLDHEHGLVAVGGADSKISIVE--NGAKVSSLPI-DYEPSSISLDHEHGLVAVG  190 (248)
Q Consensus       133 -------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~  190 (248)
                                         ........+.+++..+++++.|+.|++||  .++.+..+.. ...+.++  ++++++|+++
T Consensus       156 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~--~~~~~~l~s~  233 (342)
T d2ovrb2         156 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM--ELKDNILVSG  233 (342)
T ss_dssp             TSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE--EEETTEEEEE
T ss_pred             CCeEEEeecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEE--ecCCCEEEEE
Confidence                               01122334556788999999999999999  4455555543 3334444  4456799999


Q ss_pred             cCCCcEEEEEcCCCCCCCcccc--cCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        191 GADSKVHIYELNNKSLSPKAEL--DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       191 ~~d~~v~i~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      +.|+.|++||+...+.......  .|...+.++.++  ++++++++.||.|++||+++++
T Consensus       234 s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~  291 (342)
T d2ovrb2         234 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE  291 (342)
T ss_dssp             ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred             cCCCEEEEEecccccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCC
Confidence            9999999999988776444332  356677777765  5689999999999999999875


No 26 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.96  E-value=3.5e-27  Score=183.93  Aligned_cols=223  Identities=12%  Similarity=0.083  Sum_probs=156.1

Q ss_pred             eCCCCC--EEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeec---
Q psy16005         25 GDPKGK--NFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF---   98 (248)
Q Consensus        25 ~s~~~~--~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---   98 (248)
                      +++|.+  ++++.+ ++.|++||+.+++.+..+..|. .+..++|||||++|++++.|++|++||+.+++......+   
T Consensus        26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~  104 (426)
T d1hzua2          26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG  104 (426)
T ss_dssp             SCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred             ccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCC
Confidence            455543  344555 8999999999999999998764 589999999999999999999999999998875433333   


Q ss_pred             cCCCCCeeEEEEecCCCEEEEEe--CCcEEEEEccC--------------------------------------------
Q psy16005         99 HPIGGPIKDIAWSPDNQRMISIV--ENGAKVSSLPI--------------------------------------------  132 (248)
Q Consensus        99 ~~~~~~v~~~~~~~~~~~l~~~~--~~~~~i~~~~~--------------------------------------------  132 (248)
                      .+|...+.+++|+|||+++++++  ...+.+|+...                                            
T Consensus       105 ~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~  184 (426)
T d1hzua2         105 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET  184 (426)
T ss_dssp             SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred             CCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCC
Confidence            23455566777889999887664  33356766421                                            


Q ss_pred             ---------------------CCCCceeEeCCCCCEEEEEcC-CCeEEEEE--CC-------------------------
Q psy16005        133 ---------------------DYEPSSISLDHEHGLVAVGGA-DSKISIVE--NG-------------------------  163 (248)
Q Consensus       133 ---------------------~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~--~~-------------------------  163 (248)
                                           ...+..+.++|++++++++.. +..+.+++  .+                         
T Consensus       185 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (426)
T d1hzua2         185 GKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY  264 (426)
T ss_dssp             TEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTT
T ss_pred             CeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCC
Confidence                                 112235677788876665543 33344443  11                         


Q ss_pred             -----------------------------ceeeeec-ccCCCceEEEcCCCCEEEE-------EcCCCcEEEEEcCCCCC
Q psy16005        164 -----------------------------AKVSSLP-IDYEPSSISLDHEHGLVAV-------GGADSKVHIYELNNKSL  206 (248)
Q Consensus       164 -----------------------------~~~~~~~-~~~~~~~~~~s~~~~~l~~-------~~~d~~v~i~d~~~~~~  206 (248)
                                                   +....+. +...+..++++||+++|++       +..+++|++||+++++.
T Consensus       265 ~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~  344 (426)
T d1hzua2         265 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA  344 (426)
T ss_dssp             EEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred             CceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCc
Confidence                                         1111121 2334678999999999995       34578999999999887


Q ss_pred             CCccc--------ccCCcCeEEEEEcCCCcEEEEE-----cCCCeEEEEECCCCC
Q psy16005        207 SPKAE--------LDHLGPVTDCSFSPSNEYLVAS-----DAHRKVVLYRVPDFE  248 (248)
Q Consensus       207 ~~~~~--------~~~~~~v~~~~~s~~~~~l~~~-----~~d~~i~vw~~~~~~  248 (248)
                      .....        ..|...|..++|||||++++.+     +.++.|+|||.+|+|
T Consensus       345 ~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k  399 (426)
T d1hzua2         345 KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK  399 (426)
T ss_dssp             CCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred             CeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence            64432        1356679999999999977543     357899999999874


No 27 
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96  E-value=7e-28  Score=178.13  Aligned_cols=188  Identities=17%  Similarity=0.301  Sum_probs=142.2

Q ss_pred             CceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EE
Q psy16005         48 PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AK  126 (248)
Q Consensus        48 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~  126 (248)
                      .++++.+++|..+|++++|+|    |++|+.||+|++||+.++.       ..|...|.++++++++. +++++.|+ ++
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-------~~h~~~V~~~~~~~~~~-~~s~s~D~~v~   70 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-------QDHSNLIVSLDNSKAQE-YSSISWDDTLK   70 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-------CCCCSCEEEEECCSTTC-CEEEETTTEEE
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-------CCCCCCEEEEEecCCCe-EEEEeeccccc
Confidence            467888999999999999987    9999999999999987542       35777888888876544 45555443 46


Q ss_pred             EEEccC----------------------------------C-------CCCceeEeCCCCCEEEEEcCCC-eEEEEECCc
Q psy16005        127 VSSLPI----------------------------------D-------YEPSSISLDHEHGLVAVGGADS-KISIVENGA  164 (248)
Q Consensus       127 i~~~~~----------------------------------~-------~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~  164 (248)
                      +|++..                                  .       ......++++++..+++++.++ .+++|+...
T Consensus        71 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~  150 (287)
T d1pgua2          71 VNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSD  150 (287)
T ss_dssp             ETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTE
T ss_pred             cccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccc
Confidence            665421                                  0       1122345566777777777664 689998433


Q ss_pred             ee--eee--cccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCC----------CcEE
Q psy16005        165 KV--SSL--PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS----------NEYL  230 (248)
Q Consensus       165 ~~--~~~--~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~----------~~~l  230 (248)
                      ..  ..+  .+...+.+++|+|++.+|++|+.||.|++||+.+++........|...|.+++|+|+          +.+|
T Consensus       151 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l  230 (287)
T d1pgua2         151 LEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV  230 (287)
T ss_dssp             EEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEE
T ss_pred             cceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCee
Confidence            22  222  245568899999999999999999999999999887655555579999999999875          4689


Q ss_pred             EEEcCCCeEEEEECCCC
Q psy16005        231 VASDAHRKVVLYRVPDF  247 (248)
Q Consensus       231 ~~~~~d~~i~vw~~~~~  247 (248)
                      ++++.|+.|++||++++
T Consensus       231 ~sgs~D~~i~iw~~~~~  247 (287)
T d1pgua2         231 ATGSLDTNIFIYSVKRP  247 (287)
T ss_dssp             EEEETTSCEEEEESSCT
T ss_pred             EeecCCCeEEEEECCCC
Confidence            99999999999998763


No 28 
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95  E-value=3.4e-27  Score=182.13  Aligned_cols=211  Identities=16%  Similarity=0.162  Sum_probs=144.7

Q ss_pred             ccCCcEEEEeCCCC-----CEEEEeC-CcEEEEEecCCCce------------------eeeeecCCcceEEEEECcCCc
Q psy16005         16 QRGQPIVLGGDPKG-----KNFLYTN-GNSVIIRNIENPAI------------------SDIYTEHSCAVNVAKYSPSGF   71 (248)
Q Consensus        16 ~~~~v~~~~~s~~~-----~~l~~~~-~~~v~v~~~~~~~~------------------~~~~~~~~~~v~~~~~s~~~~   71 (248)
                      +...+.+++|.+++     .++++++ |+.+++|++.....                  ......+...+.+++|+|++ 
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-  196 (393)
T d1sq9a_         118 KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-  196 (393)
T ss_dssp             GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-
T ss_pred             CCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-
Confidence            44567778887753     4666665 99999999853210                  11112445668899999997 


Q ss_pred             EEEEEccCCeEEEEECCCCceeeee----eccCCCCCeeEEEEecCCCEEEEEeCCc----EEEEEccCCCCCceeEeCC
Q psy16005         72 YIASGDISGKVRIWDTVNKEHILKN----EFHPIGGPIKDIAWSPDNQRMISIVENG----AKVSSLPIDYEPSSISLDH  143 (248)
Q Consensus        72 ~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~i~~~~~~~~~~~~~~~~  143 (248)
                      +|++|+.||+|++||+.+++.+...    .+.+|..+|.+++|+|||++|++++.|+    +++|++........+....
T Consensus       197 ~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~  276 (393)
T d1sq9a_         197 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPT  276 (393)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-
T ss_pred             EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeecccc
Confidence            8899999999999999988765322    3457899999999999999999988765    5777765433322221100


Q ss_pred             CCCEEEEEcCCCeEEEEECCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCc-------
Q psy16005        144 EHGLVAVGGADSKISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLG-------  216 (248)
Q Consensus       144 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~-------  216 (248)
                      ..                .........|...|++++|+|++++|++|+.|++|++||+++++++..+. +|.+       
T Consensus       277 ~~----------------~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~-gH~~~v~~~~~  339 (393)
T d1sq9a_         277 HS----------------SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN-MHCDDIEIEED  339 (393)
T ss_dssp             -----------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-CCGGGCSSGGG
T ss_pred             cc----------------ccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEEC-CcCCcccCCcc
Confidence            00                00001112356678999999999999999999999999999987765543 4533       


Q ss_pred             --------------CeEEEEEcCCC----------cEEEEEcCCCeEEEEEC
Q psy16005        217 --------------PVTDCSFSPSN----------EYLVASDAHRKVVLYRV  244 (248)
Q Consensus       217 --------------~v~~~~~s~~~----------~~l~~~~~d~~i~vw~~  244 (248)
                                    .+.++.|.+.+          +.+++++.|+.|++|.-
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~~  391 (393)
T d1sq9a_         340 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE  391 (393)
T ss_dssp             CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred             EEEECCCCCEEEEcccceEEECccCceeccccCCCCEEEEEEcCCeEEEEeC
Confidence                          35566665532          34777888888888863


No 29 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.95  E-value=1.1e-24  Score=161.53  Aligned_cols=234  Identities=17%  Similarity=0.215  Sum_probs=176.3

Q ss_pred             eecccccccccCCcEEEEeCCCCCEEEEe-C-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEE-EEccCCeEE
Q psy16005          7 YIFATLPRTQRGQPIVLGGDPKGKNFLYT-N-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA-SGDISGKVR   83 (248)
Q Consensus         7 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~   83 (248)
                      +++..++.+  ..+..++|+|||++|+++ . ++.|++||+.+++.+..+..+. .+..+.|+++++.++ ++..++.+.
T Consensus        23 ~~~~~i~~g--~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   99 (301)
T d1l0qa2          23 KVTATIPVG--SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLS   99 (301)
T ss_dssp             EEEEEEECS--SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             eEEEEEECC--CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccccccccccccccccccceee
Confidence            344455432  457899999999988654 3 7899999999999998887665 468899999987654 566778999


Q ss_pred             EEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCC-c-EEEEEcc---------CCCCCceeEeCCCCCEEEEEc
Q psy16005         84 IWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVEN-G-AKVSSLP---------IDYEPSSISLDHEHGLVAVGG  152 (248)
Q Consensus        84 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~-~~i~~~~---------~~~~~~~~~~~~~~~~~~~~~  152 (248)
                      +|+..+++..  ..+. +...+.++.|+|+++.++..... . ..+|+..         ....+..+.+++++..++++.
T Consensus       100 ~~~~~~~~~~--~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (301)
T d1l0qa2         100 VIDTTSNTVA--GTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVAN  176 (301)
T ss_dssp             EEETTTTEEE--EEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEE
T ss_pred             ecccccceee--eecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeeccccceeeec
Confidence            9999988754  3333 34567899999999988776643 3 4666653         345567888999999887776


Q ss_pred             CC-CeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEc---CCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCC
Q psy16005        153 AD-SKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGG---ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS  226 (248)
Q Consensus       153 ~~-~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~---~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~  226 (248)
                      .+ +.+.+++  ..+..........+..+++++++..++++.   .++.|++||+.+++....+.  +...+.+++|+||
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~--~~~~~~~va~spd  254 (301)
T d1l0qa2         177 FDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP--VGPDPAGIAVTPD  254 (301)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE--CCSSEEEEEECTT
T ss_pred             ccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEc--CCCCEEEEEEeCC
Confidence            55 5566666  334455556666778899999999877654   34689999999988755443  4456899999999


Q ss_pred             CcEE-EEEcCCCeEEEEECCCCC
Q psy16005        227 NEYL-VASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       227 ~~~l-~~~~~d~~i~vw~~~~~~  248 (248)
                      |++| ++++.|+.|++||+++++
T Consensus       255 g~~l~va~~~~~~i~v~D~~t~~  277 (301)
T d1l0qa2         255 GKKVYVALSFCNTVSVIDTATNT  277 (301)
T ss_dssp             SSEEEEEETTTTEEEEEETTTTE
T ss_pred             CCEEEEEECCCCeEEEEECCCCe
Confidence            9987 567789999999998874


No 30 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.93  E-value=6.3e-25  Score=165.70  Aligned_cols=220  Identities=13%  Similarity=0.128  Sum_probs=150.8

Q ss_pred             EEeCCCCCEEEEeC-CcEEEEEecCCCceeeeee-cCCcceEEEEECcCCcEE-EEEccCCeEEEEECCCCceeeeeecc
Q psy16005         23 LGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYT-EHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFH   99 (248)
Q Consensus        23 ~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~   99 (248)
                      ++|++++++|++++ ++.|.+||+.+++.+..+. .+...+.+++|+|||+++ +++..++.|.+||+.+++........
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            47899999999987 8999999999999988876 455678899999999987 55668899999999998765433322


Q ss_pred             CC----CCCeeEEEEecCCCEEEEEeC-------------CcEEEEEccCCC------------CCceeEeCCCCCEEEE
Q psy16005        100 PI----GGPIKDIAWSPDNQRMISIVE-------------NGAKVSSLPIDY------------EPSSISLDHEHGLVAV  150 (248)
Q Consensus       100 ~~----~~~v~~~~~~~~~~~l~~~~~-------------~~~~i~~~~~~~------------~~~~~~~~~~~~~~~~  150 (248)
                      ..    ...+..++|+|||++++++..             ..+.+|+.....            ....+.+++++.+++.
T Consensus        82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA  161 (346)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE
T ss_pred             ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEe
Confidence            11    124668999999999987752             224556553221            1222333344433332


Q ss_pred             EcCCCeEEEEE--CCceeeee-----------------------------------------------------------
Q psy16005        151 GGADSKISIVE--NGAKVSSL-----------------------------------------------------------  169 (248)
Q Consensus       151 ~~~~~~i~~~~--~~~~~~~~-----------------------------------------------------------  169 (248)
                      +   +.+.+|+  .++.+..+                                                           
T Consensus       162 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
T d1jmxb_         162 G---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK  238 (346)
T ss_dssp             S---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred             C---CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECC
Confidence            1   1122222  11111111                                                           


Q ss_pred             ----------cccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeE
Q psy16005        170 ----------PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKV  239 (248)
Q Consensus       170 ----------~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i  239 (248)
                                .....+..+.+++++.+++... ++.|.+||..+++......  +...+.+++|+|||++|++++.|+.|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~--~~~~~~~va~s~DG~~l~v~~~d~~v  315 (346)
T d1jmxb_         239 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN--LDHTYYCVAFDKKGDKLYLGGTFNDL  315 (346)
T ss_dssp             TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE--CSSCCCEEEECSSSSCEEEESBSSEE
T ss_pred             CCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc--CCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence                      1122234556677777666655 4579999999998765554  44568999999999999999999999


Q ss_pred             EEEECCCCC
Q psy16005        240 VLYRVPDFE  248 (248)
Q Consensus       240 ~vw~~~~~~  248 (248)
                      ++||++++|
T Consensus       316 ~v~D~~t~~  324 (346)
T d1jmxb_         316 AVFNPDTLE  324 (346)
T ss_dssp             EEEETTTTE
T ss_pred             EEEECccCC
Confidence            999999875


No 31 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.93  E-value=3.8e-24  Score=160.78  Aligned_cols=213  Identities=13%  Similarity=0.124  Sum_probs=156.4

Q ss_pred             CEEEEeC-CcEEEEEecCCCceeeeeecC--CcceEEEEECcCCcEE-EEEccCCeEEEEECCCCceeeeeeccC---CC
Q psy16005         30 KNFLYTN-GNSVIIRNIENPAISDIYTEH--SCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHP---IG  102 (248)
Q Consensus        30 ~~l~~~~-~~~v~v~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~  102 (248)
                      +++++++ |++|++||+.+++.+..+..+  ...+.+++|+|||+++ ++++.++.|.+||+.+++.+.......   +.
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            4677776 899999999999998888643  4557899999999987 567789999999999998664333321   12


Q ss_pred             CCeeEEEEecCCCEEEEEeCC-------------cEEEEEcc---------CCCCCceeEeCCCCCEEEEEcCCCeEEEE
Q psy16005        103 GPIKDIAWSPDNQRMISIVEN-------------GAKVSSLP---------IDYEPSSISLDHEHGLVAVGGADSKISIV  160 (248)
Q Consensus       103 ~~v~~~~~~~~~~~l~~~~~~-------------~~~i~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  160 (248)
                      ..+..++|+|++++++++..+             ...+|+..         ....+..+.++|+++++++++.+  +.+|
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~  159 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD--LHVM  159 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS--EEEE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCC--ccee
Confidence            345679999999999887532             23455543         45667889999999999888755  4455


Q ss_pred             E--CCceeeeec-------------------------------------------------------------------c
Q psy16005        161 E--NGAKVSSLP-------------------------------------------------------------------I  171 (248)
Q Consensus       161 ~--~~~~~~~~~-------------------------------------------------------------------~  171 (248)
                      |  .++....+.                                                                   .
T Consensus       160 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T d1pbyb_         160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM  239 (337)
T ss_dssp             ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred             eeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCC
Confidence            5  222221111                                                                   0


Q ss_pred             cCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        172 DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       172 ~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      ...+..++++|++.+++.+  ++.|++||+.+++.+....  +...+.+++|+|||++|++++.|+.|++||++++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~  312 (337)
T d1pbyb_         240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred             CcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence            1112345566777776655  4789999999998866553  55678999999999999999999999999999875


No 32 
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.93  E-value=4.4e-25  Score=165.64  Aligned_cols=228  Identities=10%  Similarity=0.078  Sum_probs=163.6

Q ss_pred             cccCCcEEEEeCCCCC-EEEEeC-CcEEEEEecCCCceeeeeecCCc-ceEEEEECcCCcEEEEEccCCeEEEEECCCCc
Q psy16005         15 TQRGQPIVLGGDPKGK-NFLYTN-GNSVIIRNIENPAISDIYTEHSC-AVNVAKYSPSGFYIASGDISGKVRIWDTVNKE   91 (248)
Q Consensus        15 ~~~~~v~~~~~s~~~~-~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~   91 (248)
                      .|.++|.+++|+|++. +|++|+ |+.|++|++...........+.. ......+.++...+++++.++.+++||++.+.
T Consensus        54 ~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~  133 (342)
T d1yfqa_          54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG  133 (342)
T ss_dssp             ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHT
T ss_pred             CCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccccccccceeeccccc
Confidence            4889999999998754 677775 99999999988776665554433 34455566788899999999999999986544


Q ss_pred             eeeee--ecc--CCCCCeeEEEEecCCCEEEEEeCCc-EEEEEccCCCCC-------------ceeE-eCCCCCEEEEEc
Q psy16005         92 HILKN--EFH--PIGGPIKDIAWSPDNQRMISIVENG-AKVSSLPIDYEP-------------SSIS-LDHEHGLVAVGG  152 (248)
Q Consensus        92 ~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~~~~~~-------------~~~~-~~~~~~~~~~~~  152 (248)
                      .....  ...  ........+.+.+++..+++++.++ +++|++......             .... +..++..+++++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  213 (342)
T d1yfqa_         134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS  213 (342)
T ss_dssp             TBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE
T ss_pred             cceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeec
Confidence            32111  111  1233455677888899999988777 599998644322             2223 334667899999


Q ss_pred             CCCeEEEEECCce--------eee----------ecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccC
Q psy16005        153 ADSKISIVENGAK--------VSS----------LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH  214 (248)
Q Consensus       153 ~~~~i~~~~~~~~--------~~~----------~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~  214 (248)
                      .|+.+.+|+....        ...          ..+...+++++|+|++++|++|+.||.|++||+++++.+..+... 
T Consensus       214 ~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-  292 (342)
T d1yfqa_         214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-  292 (342)
T ss_dssp             TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-
T ss_pred             CCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-
Confidence            9999999972111        000          012334678999999999999999999999999998876555422 


Q ss_pred             CcCeEEEEEcCCCcEEEEEcCCCeEEEEEC
Q psy16005        215 LGPVTDCSFSPSNEYLVASDAHRKVVLYRV  244 (248)
Q Consensus       215 ~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~  244 (248)
                       ..+..++|+|+++++++++.|+.+++|..
T Consensus       293 -~~~~~~~~s~~~~~l~~a~sdd~~~~~~~  321 (342)
T d1yfqa_         293 -NEDSVVKIACSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             -SSSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred             -CCCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence             34566788899999999988876665543


No 33 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.93  E-value=3.8e-24  Score=166.71  Aligned_cols=240  Identities=11%  Similarity=0.001  Sum_probs=154.5

Q ss_pred             eecccccccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCcee--eee---ecCCcceEEEEECcCCcEE-EEEccC
Q psy16005          7 YIFATLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAIS--DIY---TEHSCAVNVAKYSPSGFYI-ASGDIS   79 (248)
Q Consensus         7 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~--~~~---~~~~~~v~~~~~s~~~~~l-~~~~~d   79 (248)
                      +++..++.+  ..+..++|||||+++++++ |+.+++||+.+++..  ..+   ..|.+.+.+..|+|||++| ++++.+
T Consensus        53 ~v~~~~~~g--~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~  130 (432)
T d1qksa2          53 EIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWP  130 (432)
T ss_dssp             CEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEET
T ss_pred             cEEEEEeCC--CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCC
Confidence            455566543  3589999999999999886 899999999887643  222   2455667777888999976 678889


Q ss_pred             CeEEEEECCCCceeeeeec---------cCCCCCeeEEEEecCCCEEEEEeCC--cEEEE-----------EccCCCCCc
Q psy16005         80 GKVRIWDTVNKEHILKNEF---------HPIGGPIKDIAWSPDNQRMISIVEN--GAKVS-----------SLPIDYEPS  137 (248)
Q Consensus        80 g~i~iwd~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~~--~~~i~-----------~~~~~~~~~  137 (248)
                      +.|++||..+++.+.....         ..+......+.++|+++.++....+  .+.+|           .+.....+.
T Consensus       131 ~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~  210 (432)
T d1qksa2         131 PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLH  210 (432)
T ss_dssp             TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEE
T ss_pred             CeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccc
Confidence            9999999999886533221         1234566778999999887766532  23444           444556677


Q ss_pred             eeEeCCCCCEEEEEcC-CCeEEEEEC--Cceeeeecc-------------------------------------------
Q psy16005        138 SISLDHEHGLVAVGGA-DSKISIVEN--GAKVSSLPI-------------------------------------------  171 (248)
Q Consensus       138 ~~~~~~~~~~~~~~~~-~~~i~~~~~--~~~~~~~~~-------------------------------------------  171 (248)
                      .+.++|+++++++++. ++.+.+++.  ++....+..                                           
T Consensus       211 ~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~  290 (432)
T d1qksa2         211 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHP  290 (432)
T ss_dssp             EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred             cceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccccccccc
Confidence            8999999997776654 445666652  111111100                                           


Q ss_pred             --cCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCC------------------------C-------cccccCCcCe
Q psy16005        172 --DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLS------------------------P-------KAELDHLGPV  218 (248)
Q Consensus       172 --~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~------------------------~-------~~~~~~~~~v  218 (248)
                        ...+....++|++..+++++.++..++|+..+....                        .       .....|...+
T Consensus       291 ~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~~s~d~~~k~w~~~~~~~l~~~~~~v  370 (432)
T d1qksa2         291 DNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRV  370 (432)
T ss_dssp             TTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEE
T ss_pred             ccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEEEechhhcccccCCceEecccccccccCCCCCcE
Confidence              001222344555555555555555555543221100                        0       0111456678


Q ss_pred             EEEEEcCCCcEEEEEc-----CCCeEEEEECCCCC
Q psy16005        219 TDCSFSPSNEYLVASD-----AHRKVVLYRVPDFE  248 (248)
Q Consensus       219 ~~~~~s~~~~~l~~~~-----~d~~i~vw~~~~~~  248 (248)
                      .+++|||||++++.+.     .+|.|+|||.+|+|
T Consensus       371 ~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k  405 (432)
T d1qksa2         371 VQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE  405 (432)
T ss_dssp             EEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred             EEeEECCCCCEEEEEEecCCCCCCcEEEEECCCce
Confidence            9999999999886553     46899999998874


No 34 
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92  E-value=1.4e-22  Score=148.83  Aligned_cols=186  Identities=16%  Similarity=0.222  Sum_probs=114.6

Q ss_pred             eeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEE
Q psy16005         51 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSS  129 (248)
Q Consensus        51 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~  129 (248)
                      +.....|...|+|++|  |+++||+|+.||+|+|||+.+++.+  ..+.+|...|.+++|  ++++|++++.++ +++|+
T Consensus         8 i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~--~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~   81 (293)
T d1p22a2           8 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECK--RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD   81 (293)
T ss_dssp             EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEE--EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred             EeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEE--EEEecCCCCEeeeec--ccceeecccccccccccc
Confidence            3344577888998765  7899999999999999999998854  677889999999887  678999999877 58998


Q ss_pred             ccCCC--------CCceeEeCCCCCEEEEEcCCCeEEEEE----------------------------------------
Q psy16005        130 LPIDY--------EPSSISLDHEHGLVAVGGADSKISIVE----------------------------------------  161 (248)
Q Consensus       130 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~~~----------------------------------------  161 (248)
                      +....        ........+....++++..++.+.+|+                                        
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~  161 (293)
T d1p22a2          82 VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK  161 (293)
T ss_dssp             SSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred             cccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCcee
Confidence            75432        122223334444555556666666665                                        


Q ss_pred             ---CCceeeeecccCC-CceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCC
Q psy16005        162 ---NGAKVSSLPIDYE-PSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHR  237 (248)
Q Consensus       162 ---~~~~~~~~~~~~~-~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~  237 (248)
                         ............. .....+++++.++++++.|+.|++||+++.+.+.... +|...+..  +++++.+|++++.||
T Consensus       162 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~--~~~~~~~l~sg~~dg  238 (293)
T d1p22a2         162 VWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRC--IRFDNKRIVSGAYDG  238 (293)
T ss_dssp             EEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEE--EECCSSEEEEEETTS
T ss_pred             eecCCCCcEEEEEcccccccccccCCCCeEEEecCCCEEEEEecccceeeeeec-ccceeeee--ccccceEEEEEcCCC
Confidence               2222211111111 1222344455556666666666666665555443322 44444432  345566666666666


Q ss_pred             eEEEEECC
Q psy16005        238 KVVLYRVP  245 (248)
Q Consensus       238 ~i~vw~~~  245 (248)
                      .|++||+.
T Consensus       239 ~i~iwd~~  246 (293)
T d1p22a2         239 KIKVWDLV  246 (293)
T ss_dssp             CEEEEEHH
T ss_pred             EEEEEECC
Confidence            66666553


No 35 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.91  E-value=2.3e-23  Score=157.96  Aligned_cols=177  Identities=13%  Similarity=0.107  Sum_probs=142.3

Q ss_pred             EEEECc-CCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCC-c--EEEEEccC------
Q psy16005         63 VAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVEN-G--AKVSSLPI------  132 (248)
Q Consensus        63 ~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~--~~i~~~~~------  132 (248)
                      .-.||| ||+++|+++ +|.|++||+.++...   .+ .|...|.+++|+|||+.|++++.+ +  +.+|++..      
T Consensus         7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~---~~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~   81 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL---KV-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF   81 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEE---EC-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred             cccccCCCCCEEEEEE-CCeEEEEECCCCcEE---Ec-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEe
Confidence            457999 999999976 479999999887643   23 588999999999999999877644 3  57888753      


Q ss_pred             ---CCCCceeEeCCCCCEEEEEcCCCeEEEEE--CCceeeeec-ccCCCceEEEcCCCCEEEEEc----------CCCcE
Q psy16005        133 ---DYEPSSISLDHEHGLVAVGGADSKISIVE--NGAKVSSLP-IDYEPSSISLDHEHGLVAVGG----------ADSKV  196 (248)
Q Consensus       133 ---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~-~~~~~~~~~~s~~~~~l~~~~----------~d~~v  196 (248)
                         ...+..++|+|+++++++++.++.+++|+  .++....+. +...+.+++|+|||++|+.+.          .++.+
T Consensus        82 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~  161 (360)
T d1k32a3          82 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI  161 (360)
T ss_dssp             CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred             eCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccce
Confidence               34567899999999999999999999999  444444443 455678999999999998653          34569


Q ss_pred             EEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCC
Q psy16005        197 HIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD  246 (248)
Q Consensus       197 ~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~  246 (248)
                      ++||+.+++.....  .+...+..++|+|||++|++++.++.+.+|+...
T Consensus       162 ~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~  209 (360)
T d1k32a3         162 HVYDMEGRKIFAAT--TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV  209 (360)
T ss_dssp             EEEETTTTEEEECS--CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred             eeeccccCceeeec--ccccccccccccCCCCEEEEEeCCCceEcccccc
Confidence            99999987664322  4667789999999999999999999999998754


No 36 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.90  E-value=1.6e-22  Score=157.51  Aligned_cols=192  Identities=14%  Similarity=0.076  Sum_probs=133.9

Q ss_pred             eCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeecc---C
Q psy16005         25 GDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFH---P  100 (248)
Q Consensus        25 ~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~  100 (248)
                      .+++.-++++.+ ++.|.+||..+++.+..+..+ ..+..++|||||+++++++.||.|++||+.+++......++   .
T Consensus        28 ~~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~  106 (432)
T d1qksa2          28 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE  106 (432)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred             CCCCcEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCC
Confidence            343433345555 899999999999999999876 46899999999999999999999999999887643323322   2


Q ss_pred             CCCCeeEEEEecCCCEEEEEeCCcEEEEEccCCCCCceeEeCCCCCEEEEEcCCCeEEEEE--CCceeeeec--------
Q psy16005        101 IGGPIKDIAWSPDNQRMISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKISIVE--NGAKVSSLP--------  170 (248)
Q Consensus       101 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~--------  170 (248)
                      |.+.+.+..|+|||++|++                              ++..++.+++||  .++.+..+.        
T Consensus       107 ~~~~~~s~~~SpDG~~l~v------------------------------s~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~  156 (432)
T d1qksa2         107 ARSIETSKMEGWEDKYAIA------------------------------GAYWPPQYVIMDGETLEPKKIQSTRGMTYDE  156 (432)
T ss_dssp             EEEEEECCSTTCTTTEEEE------------------------------EEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred             CCCeEEecccCCCCCEEEE------------------------------EcCCCCeEEEEeCccccceeeeccCCccccc
Confidence            3334444455666665533                              334455555555  333333222        


Q ss_pred             ----ccCCCceEEEcCCCCEEE-EEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcC-CCeEEEEEC
Q psy16005        171 ----IDYEPSSISLDHEHGLVA-VGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDA-HRKVVLYRV  244 (248)
Q Consensus       171 ----~~~~~~~~~~s~~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~vw~~  244 (248)
                          .......+.++|++..++ +...++.|.+||..+.+........+...+..++|+|||+++++++. ++.+.+++.
T Consensus       157 ~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~  236 (432)
T d1qksa2         157 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDT  236 (432)
T ss_dssp             CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred             eeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeec
Confidence                223345678899998654 55667999999998877544444456677899999999998877754 578888888


Q ss_pred             CCC
Q psy16005        245 PDF  247 (248)
Q Consensus       245 ~~~  247 (248)
                      .++
T Consensus       237 ~~~  239 (432)
T d1qksa2         237 KEG  239 (432)
T ss_dssp             TTT
T ss_pred             ccc
Confidence            764


No 37 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.90  E-value=2.6e-21  Score=145.12  Aligned_cols=230  Identities=11%  Similarity=0.096  Sum_probs=161.0

Q ss_pred             cccCCcEEEEeCCCCCEEEEeC--CcEEEEEecCCCceeeeee---cCCcceEEEEECcCCcEEEEEcc-CCeEEEEECC
Q psy16005         15 TQRGQPIVLGGDPKGKNFLYTN--GNSVIIRNIENPAISDIYT---EHSCAVNVAKYSPSGFYIASGDI-SGKVRIWDTV   88 (248)
Q Consensus        15 ~~~~~v~~~~~s~~~~~l~~~~--~~~v~v~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~   88 (248)
                      .+.+.+..++|||||++|++++  ++.|++|++........+.   .+...+..++|+|||++|++++. ++.|.+|+..
T Consensus        34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~  113 (333)
T d1ri6a_          34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE  113 (333)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccc
Confidence            3567899999999999996654  8999999987654332222   34455778999999999988875 6789999988


Q ss_pred             CCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc--EEEEEcc----------------CCCCCceeEeCCCCCEEEE
Q psy16005         89 NKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG--AKVSSLP----------------IDYEPSSISLDHEHGLVAV  150 (248)
Q Consensus        89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~~~~----------------~~~~~~~~~~~~~~~~~~~  150 (248)
                      ............+...+.++.++|++++++.++...  +.+|+..                ....+..+.+++++..++.
T Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~  193 (333)
T d1ri6a_         114 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC  193 (333)
T ss_dssp             TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE
T ss_pred             cccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEe
Confidence            776554455556677889999999999998887544  4555542                2234567889998887765


Q ss_pred             E-cCCCeEEEEECC---ce---eeeec-------ccCCCceEEEcCCCCEEEEE-cCCCcEEEEEcCCCCCCCccc--cc
Q psy16005        151 G-GADSKISIVENG---AK---VSSLP-------IDYEPSSISLDHEHGLVAVG-GADSKVHIYELNNKSLSPKAE--LD  213 (248)
Q Consensus       151 ~-~~~~~i~~~~~~---~~---~~~~~-------~~~~~~~~~~s~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~~--~~  213 (248)
                      . ...+...+++..   ..   .....       ....+..++++++++++++. ..++.+.+|++..........  ..
T Consensus       194 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (333)
T d1ri6a_         194 VNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP  273 (333)
T ss_dssp             EETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred             eccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeC
Confidence            4 455667777621   11   11111       12234567899999966654 567889999987665433222  12


Q ss_pred             CCcCeEEEEEcCCCcEEEEEc-CCCeEEEEEC
Q psy16005        214 HLGPVTDCSFSPSNEYLVASD-AHRKVVLYRV  244 (248)
Q Consensus       214 ~~~~v~~~~~s~~~~~l~~~~-~d~~i~vw~~  244 (248)
                      ....+..++|+|||++|++++ .++.|.+|++
T Consensus       274 ~~~~p~~~a~spDGk~l~va~~~~~~v~v~~i  305 (333)
T d1ri6a_         274 TETQPRGFNVDHSGKYLIAAGQKSHHISVYEI  305 (333)
T ss_dssp             CSSSCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred             CCCCeeEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence            445678999999999987775 4689999954


No 38 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.89  E-value=1.8e-22  Score=157.06  Aligned_cols=216  Identities=10%  Similarity=0.037  Sum_probs=146.2

Q ss_pred             eecccccccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeee--e---ecCCcceEEEEECcCCcEEEE-EccC
Q psy16005          7 YIFATLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDI--Y---TEHSCAVNVAKYSPSGFYIAS-GDIS   79 (248)
Q Consensus         7 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~--~---~~~~~~v~~~~~s~~~~~l~~-~~~d   79 (248)
                      +++..++.+  ..+..++|||||+++++++ |+.+++||+.+++....  +   .+|.+.+.+++|+|||+++++ +..+
T Consensus        53 ~~~~~l~~g--~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~  130 (426)
T d1hzua2          53 KIVKVIDTG--YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP  130 (426)
T ss_dssp             SEEEEEECC--SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred             cEEEEEeCC--CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCC
Confidence            345556543  3589999999999999887 89999999998875432  2   256666778888999998755 4578


Q ss_pred             CeEEEEECCCCceeeee-----------------------------------------------------eccCCCCCee
Q psy16005         80 GKVRIWDTVNKEHILKN-----------------------------------------------------EFHPIGGPIK  106 (248)
Q Consensus        80 g~i~iwd~~~~~~~~~~-----------------------------------------------------~~~~~~~~v~  106 (248)
                      +.+++||..+++.....                                                     ....+...+.
T Consensus       131 ~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  210 (426)
T d1hzua2         131 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLA  210 (426)
T ss_dssp             SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEE
T ss_pred             CeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccE
Confidence            99999998765432110                                                     0012334456


Q ss_pred             EEEEecCCCEEEEEeCCc--EEEEEcc-----------------------------------------------------
Q psy16005        107 DIAWSPDNQRMISIVENG--AKVSSLP-----------------------------------------------------  131 (248)
Q Consensus       107 ~~~~~~~~~~l~~~~~~~--~~i~~~~-----------------------------------------------------  131 (248)
                      .+.|+|++++++++..+.  +.+++..                                                     
T Consensus       211 ~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~  290 (426)
T d1hzua2         211 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ  290 (426)
T ss_dssp             EEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTT
T ss_pred             eeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeecccccccc
Confidence            788888888887775332  2222210                                                     


Q ss_pred             -----------CCCCCceeEeCCCCCEEEE-------EcCCCeEEEEE--CCceeeee----------cccCCCceEEEc
Q psy16005        132 -----------IDYEPSSISLDHEHGLVAV-------GGADSKISIVE--NGAKVSSL----------PIDYEPSSISLD  181 (248)
Q Consensus       132 -----------~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~~--~~~~~~~~----------~~~~~~~~~~~s  181 (248)
                                 +...+..++++|+++++++       +..+++|++||  +++...++          .+...+..++||
T Consensus       291 ~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fS  370 (426)
T d1hzua2         291 YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYN  370 (426)
T ss_dssp             TBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEEC
T ss_pred             ccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEEC
Confidence                       1234677899999999995       44578999999  44444332          123346778999


Q ss_pred             CCCCEEEEE-----cCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEE
Q psy16005        182 HEHGLVAVG-----GADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLV  231 (248)
Q Consensus       182 ~~~~~l~~~-----~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  231 (248)
                      |||++++++     +.++.|+|||.++.+....+. ++.      .++|+|+|-+
T Consensus       371 pDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~-~~~------~~tp~Gk~~~  418 (426)
T d1hzua2         371 KRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK-DPR------LITPTGKFNV  418 (426)
T ss_dssp             SSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEEC-CTT------CCSEEEEEEH
T ss_pred             CCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEEC-CCC------ccCCCceEeE
Confidence            999977543     357889999999998754443 332      3467777643


No 39 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.89  E-value=5.6e-21  Score=143.26  Aligned_cols=200  Identities=15%  Similarity=0.164  Sum_probs=148.9

Q ss_pred             ceecccccccc-cCCcEEEEeCCCCCEEEE-eC-CcEEEEEecCCCceeeeeecCCc-----ceEEEEECcCCcEEEEEc
Q psy16005          6 KYIFATLPRTQ-RGQPIVLGGDPKGKNFLY-TN-GNSVIIRNIENPAISDIYTEHSC-----AVNVAKYSPSGFYIASGD   77 (248)
Q Consensus         6 ~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~-~~~v~v~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~   77 (248)
                      .+++..++... ...+.+++|+|||+++++ ++ ++.|.+||+.+++.+..+..+..     .+..++|+|++++++++.
T Consensus        21 ~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~  100 (337)
T d1pbyb_          21 MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYE  100 (337)
T ss_dssp             TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEE
T ss_pred             CeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEee
Confidence            34555565433 355789999999998754 44 89999999999998887765432     345789999999998875


Q ss_pred             ------------cCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccC-------------
Q psy16005         78 ------------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPI-------------  132 (248)
Q Consensus        78 ------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~-------------  132 (248)
                                  .+..+.+||..+++...  .+. +...+..++|+|||+++++++.+ ..+|+...             
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~-~~~~~~~~~~s~dg~~l~~~~~~-~~~~d~~~~~~~~~~~~~~~~  176 (337)
T d1pbyb_         101 SPVRLELTHFEVQPTRVALYDAETLSRRK--AFE-APRQITMLAWARDGSKLYGLGRD-LHVMDPEAGTLVEDKPIQSWE  176 (337)
T ss_dssp             EEEEECSSCEEECCCEEEEEETTTTEEEE--EEE-CCSSCCCEEECTTSSCEEEESSS-EEEEETTTTEEEEEECSTTTT
T ss_pred             cCCcceeeeccccccceeeccccCCeEEE--ecc-ccCCceEEEEcCCCCEEEEEcCC-cceeeeecCcEEEEeecCCcc
Confidence                        35688999999887543  333 34568889999999999987644 34444310             


Q ss_pred             ---------------------------------------------------------------CCCCceeEeCCCCCEEE
Q psy16005        133 ---------------------------------------------------------------DYEPSSISLDHEHGLVA  149 (248)
Q Consensus       133 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~  149 (248)
                                                                                     ......+.+++++.+++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (337)
T d1pbyb_         177 AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAF  256 (337)
T ss_dssp             TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred             ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEE
Confidence                                                                           01122334556666665


Q ss_pred             EEcCCCeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCccc
Q psy16005        150 VGGADSKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE  211 (248)
Q Consensus       150 ~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~  211 (248)
                      .+  ++.+++||  .++.+..+.....+.+++|+|||++|++++.++.|++||.++.+.+..+.
T Consensus       257 ~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         257 GA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             EE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             Ec--cccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEE
Confidence            54  47899999  66777888888889999999999999999999999999999988765554


No 40 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.89  E-value=4.9e-20  Score=136.06  Aligned_cols=207  Identities=14%  Similarity=0.186  Sum_probs=157.5

Q ss_pred             CCcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEE-EEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCC
Q psy16005         36 NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN  114 (248)
Q Consensus        36 ~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~  114 (248)
                      .++.|.+||+.+++.++.+... ..+..++|+|||++| ++++.++.|++||+.+++.+  ..+..+ ..+..++|++++
T Consensus        10 ~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~--~~~~~~-~~~~~~~~~~~~   85 (301)
T d1l0qa2          10 ESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVPAG-SSPQGVAVSPDG   85 (301)
T ss_dssp             TTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEECS-SSEEEEEECTTS
T ss_pred             CCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcee--eeeecc-cccccccccccc
Confidence            4899999999999999888643 557899999999987 56778899999999998865  344443 457899999999


Q ss_pred             CEEEEEeCCc--EEEEEcc---------CCCCCceeEeCCCCCEEE-EEcCCCeEEEEE--CCceeeeecccCCCceEEE
Q psy16005        115 QRMISIVENG--AKVSSLP---------IDYEPSSISLDHEHGLVA-VGGADSKISIVE--NGAKVSSLPIDYEPSSISL  180 (248)
Q Consensus       115 ~~l~~~~~~~--~~i~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~  180 (248)
                      +.+++.+.+.  ..+|+..         ....+..+.++|+++.++ ++..++.+.+|+  .......+.....+..+++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (301)
T d1l0qa2          86 KQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAV  165 (301)
T ss_dssp             SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEE
T ss_pred             ccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEe
Confidence            9887776443  3666653         345567889999998765 555678889998  5556666777777899999


Q ss_pred             cCCCCEEEEEcCC-CcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEc---CCCeEEEEECCCCC
Q psy16005        181 DHEHGLVAVGGAD-SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD---AHRKVVLYRVPDFE  248 (248)
Q Consensus       181 s~~~~~l~~~~~d-~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~d~~i~vw~~~~~~  248 (248)
                      +|++..+++++.+ +.+.+|+....+.....  .....+..++|+++++.++.++   .++.|++||+.+++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~  235 (301)
T d1l0qa2         166 TPDGTKVYVANFDSMSISVIDTVTNSVIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK  235 (301)
T ss_dssp             CTTSSEEEEEETTTTEEEEEETTTTEEEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred             eccccceeeecccccccccccccceeeeecc--cccCCcceeeccccccccccccccceeeeeeeeecCCCe
Confidence            9999988877765 56777777666553333  3445678899999999887653   34789999998764


No 41 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.89  E-value=6.3e-21  Score=144.37  Aligned_cols=225  Identities=12%  Similarity=0.079  Sum_probs=155.9

Q ss_pred             cEEEEeCCCCCEEEEeC------CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEc----------cCCeEE
Q psy16005         20 PIVLGGDPKGKNFLYTN------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD----------ISGKVR   83 (248)
Q Consensus        20 v~~~~~s~~~~~l~~~~------~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~   83 (248)
                      +...+.+|||+.+++..      .+.+++||..+++.+..+..+..+  .++|||||++|++.+          .++.|+
T Consensus         4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~   81 (355)
T d2bbkh_           4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVE   81 (355)
T ss_dssp             CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence            33446789999987752      458999999999998888765444  799999999887643          478999


Q ss_pred             EEECCCCceeeeeeccC-----CCCCeeEEEEecCCCEEEEEeCC---cEEEEEccCC----------------------
Q psy16005         84 IWDTVNKEHILKNEFHP-----IGGPIKDIAWSPDNQRMISIVEN---GAKVSSLPID----------------------  133 (248)
Q Consensus        84 iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~---~~~i~~~~~~----------------------  133 (248)
                      +||..+++.........     .......++|+|++++++.....   ...+|+....                      
T Consensus        82 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (355)
T d2bbkh_          82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTF  161 (355)
T ss_dssp             EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEE
T ss_pred             EEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcce
Confidence            99999988654333221     12234668999999988877532   2345543210                      


Q ss_pred             ---------------------------------CCCceeEeCCCCCEEEEEcCCCeEEEEECC-ceeeeec---------
Q psy16005        134 ---------------------------------YEPSSISLDHEHGLVAVGGADSKISIVENG-AKVSSLP---------  170 (248)
Q Consensus       134 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~---------  170 (248)
                                                       .......+.+++..++.++.++.+++|+.. .....+.         
T Consensus       162 ~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  241 (355)
T d2bbkh_         162 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAE  241 (355)
T ss_dssp             EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred             EEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccce
Confidence                                             011233455566677788888999999822 2111111         


Q ss_pred             -----ccCCCceEEEcCCCCEEEEEcCC----------CcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCc--EEEEE
Q psy16005        171 -----IDYEPSSISLDHEHGLVAVGGAD----------SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNE--YLVAS  233 (248)
Q Consensus       171 -----~~~~~~~~~~s~~~~~l~~~~~d----------~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~  233 (248)
                           .......++++|++..++....+          ..|.+||..+++.+..+.  +...+.+++|+|||+  +++++
T Consensus       242 ~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~--~~~~~~~~a~spDG~~~l~v~~  319 (355)
T d2bbkh_         242 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE--MGHEIDSINVSQDEKPLLYALS  319 (355)
T ss_dssp             HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECCSSSCEEEEEE
T ss_pred             EeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec--CCCCEEEEEEcCCCCeEEEEEE
Confidence                 01223568899999988776533          369999999998765554  445689999999998  34567


Q ss_pred             cCCCeEEEEECCCCC
Q psy16005        234 DAHRKVVLYRVPDFE  248 (248)
Q Consensus       234 ~~d~~i~vw~~~~~~  248 (248)
                      +.|+.|++||+++++
T Consensus       320 ~~d~~i~v~D~~tg~  334 (355)
T d2bbkh_         320 TGDKTLYIHDAESGE  334 (355)
T ss_dssp             TTTTEEEEEETTTCC
T ss_pred             CCCCEEEEEECCCCC
Confidence            789999999999886


No 42 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.88  E-value=6.1e-20  Score=139.91  Aligned_cols=230  Identities=12%  Similarity=-0.013  Sum_probs=156.6

Q ss_pred             cccCCcEEEEeCCCCCEEEEeC------CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEc----------c
Q psy16005         15 TQRGQPIVLGGDPKGKNFLYTN------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD----------I   78 (248)
Q Consensus        15 ~~~~~v~~~~~s~~~~~l~~~~------~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~   78 (248)
                      .+.+++.+++++|||+.++...      .+.+++||..+++.+..+..+..+  .++|+|||++|++++          .
T Consensus        18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~   95 (373)
T d2madh_          18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKR   95 (373)
T ss_pred             cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCccccccc
Confidence            4678899999999999988752      367999999999999888765543  799999999998874          4


Q ss_pred             CCeEEEEECCCCceeeeeeccCC-----CCCeeEEEEecCCCEEEEEeCC---cEEEEEccC------CCCCceeEeCCC
Q psy16005         79 SGKVRIWDTVNKEHILKNEFHPI-----GGPIKDIAWSPDNQRMISIVEN---GAKVSSLPI------DYEPSSISLDHE  144 (248)
Q Consensus        79 dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~---~~~i~~~~~------~~~~~~~~~~~~  144 (248)
                      ++.|.+||..+++..........     ......+.|+++++.++....+   ...+|+...      ...+.++.++|+
T Consensus        96 ~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  175 (373)
T d2madh_          96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPG  175 (373)
T ss_pred             ceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEeccceeEEEecC
Confidence            57899999999886533322211     1123567888998877666532   245666432      233556677777


Q ss_pred             CCE-EEEEcCCCeEEEEEC--Cceeeeec-----------------------------------------------c---
Q psy16005        145 HGL-VAVGGADSKISIVEN--GAKVSSLP-----------------------------------------------I---  171 (248)
Q Consensus       145 ~~~-~~~~~~~~~i~~~~~--~~~~~~~~-----------------------------------------------~---  171 (248)
                      ++. +++.+.|+.+.+|+.  +.......                                               .   
T Consensus       176 g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  255 (373)
T d2madh_         176 APSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDAL  255 (373)
T ss_pred             CCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccc
Confidence            764 356677777777761  11110000                                               0   


Q ss_pred             ----------cCCCceEEEcCCCCEEE----------EEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcE--
Q psy16005        172 ----------DYEPSSISLDHEHGLVA----------VGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEY--  229 (248)
Q Consensus       172 ----------~~~~~~~~~s~~~~~l~----------~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~--  229 (248)
                                ......++++|++..++          ....++.+.+||..+++....+  .+...+..++|+|||+.  
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~--~~~~~~~~~a~spDG~~~l  333 (373)
T d2madh_         256 SGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI--SLGHDVDAISVAQDGGPDL  333 (373)
T ss_pred             cCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEe--cCCCCeeEEEECCCCCEEE
Confidence                      00012245555555443          3344567899999988876544  45667899999999984  


Q ss_pred             EEEEcCCCeEEEEECCCCC
Q psy16005        230 LVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       230 l~~~~~d~~i~vw~~~~~~  248 (248)
                      +++++.|+.|++||+.++|
T Consensus       334 ~vt~~~d~~v~v~D~~tg~  352 (373)
T d2madh_         334 YALSAGTEVLHIYDAGAGD  352 (373)
T ss_pred             EEEeCCCCeEEEEECCCCC
Confidence            4678899999999999986


No 43 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.80  E-value=3.5e-18  Score=128.24  Aligned_cols=203  Identities=7%  Similarity=0.013  Sum_probs=137.1

Q ss_pred             ceecccccccccCCcEEEEeCCCCCEEEEe-C-CcEEEEEecCCCceeeeeecCC------cceEEEEECcCCcEEEEEc
Q psy16005          6 KYIFATLPRTQRGQPIVLGGDPKGKNFLYT-N-GNSVIIRNIENPAISDIYTEHS------CAVNVAKYSPSGFYIASGD   77 (248)
Q Consensus         6 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~-~~~v~v~~~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~   77 (248)
                      .+++..++..+...+.+++|+|||++++++ . ++.|++||+.+++....+....      ..+..++|+|||+++++++
T Consensus        28 ~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~  107 (346)
T d1jmxb_          28 DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV  107 (346)
T ss_dssp             TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred             CCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEe
Confidence            345555555556678899999999988655 3 8999999999998877664322      2356789999999988765


Q ss_pred             ------------cCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEc---------------
Q psy16005         78 ------------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSL---------------  130 (248)
Q Consensus        78 ------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~---------------  130 (248)
                                  .++.+.+|+..+++.............+..+.++++++.++..  ....+|+.               
T Consensus       108 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  185 (346)
T d1jmxb_         108 NPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWN  185 (346)
T ss_dssp             EEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCC
T ss_pred             cCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeC--CcceEEEccCCCEEEEEecCCCc
Confidence                        4678999998876643222222223344445555555444332  11222221               


Q ss_pred             ----------------------------------------------------cC-----------CCCCceeEeCCCCCE
Q psy16005        131 ----------------------------------------------------PI-----------DYEPSSISLDHEHGL  147 (248)
Q Consensus       131 ----------------------------------------------------~~-----------~~~~~~~~~~~~~~~  147 (248)
                                                                          ..           ........+++++..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (346)
T d1jmxb_         186 RKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN  265 (346)
T ss_dssp             CTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT
T ss_pred             cceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCE
Confidence                                                                10           111223445555555


Q ss_pred             EEEEcCCCeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCccc
Q psy16005        148 VAVGGADSKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE  211 (248)
Q Consensus       148 ~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~  211 (248)
                      ++... ++.+.+||  .++.+..+.....+.+++|+|||++|++++.|+.|++||+++++.+....
T Consensus       266 ~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~  330 (346)
T d1jmxb_         266 QIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK  330 (346)
T ss_dssp             EEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred             EEEec-CCeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEE
Confidence            55443 35789999  66777777777889999999999999999999999999999998776554


No 44 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.79  E-value=1.6e-16  Score=118.67  Aligned_cols=211  Identities=13%  Similarity=0.149  Sum_probs=143.3

Q ss_pred             CCcEEEEEecCCCceeeee--ecCCcceEEEEECcCCcEEEEE-ccCCeEEEEECCCCceeeee-eccCCCCCeeEEEEe
Q psy16005         36 NGNSVIIRNIENPAISDIY--TEHSCAVNVAKYSPSGFYIASG-DISGKVRIWDTVNKEHILKN-EFHPIGGPIKDIAWS  111 (248)
Q Consensus        36 ~~~~v~v~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~  111 (248)
                      .++.|++|+++.......+  ..|.+.+..++|+|||++|+++ ..|+.|++|++......... ....+...+..++|+
T Consensus        12 ~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~s   91 (333)
T d1ri6a_          12 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTD   91 (333)
T ss_dssp             GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEEC
T ss_pred             CCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEc
Confidence            3899999998765433322  3678899999999999998554 55899999999866433222 122344567889999


Q ss_pred             cCCCEEEEEeCCc--EEEEEcc------------CCCCCceeEeCCCCCEEEEEc-CCCeEEEEECCc---eee------
Q psy16005        112 PDNQRMISIVENG--AKVSSLP------------IDYEPSSISLDHEHGLVAVGG-ADSKISIVENGA---KVS------  167 (248)
Q Consensus       112 ~~~~~l~~~~~~~--~~i~~~~------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~---~~~------  167 (248)
                      |||++|++++.+.  +.+|...            ....+..+.++|+++.++.+. .+..+.+|+...   ...      
T Consensus        92 pDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  171 (333)
T d1ri6a_          92 HQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEV  171 (333)
T ss_dssp             TTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEE
T ss_pred             CCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceee
Confidence            9999999997544  3555432            234567889999999877665 456788888221   111      


Q ss_pred             eecccCCCceEEEcCCCCEEEEEc-CCCcEEEEEcCCCCCCCcc---------cccCCcCeEEEEEcCCCcEEEEE-cCC
Q psy16005        168 SLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKA---------ELDHLGPVTDCSFSPSNEYLVAS-DAH  236 (248)
Q Consensus       168 ~~~~~~~~~~~~~s~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~---------~~~~~~~v~~~~~s~~~~~l~~~-~~d  236 (248)
                      .......+..+++++++.+++... ..+...+++..........         ..........+++++++++++.. ..+
T Consensus       172 ~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~  251 (333)
T d1ri6a_         172 TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA  251 (333)
T ss_dssp             ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT
T ss_pred             eeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccC
Confidence            112234467899999999776654 4567888887554322111         01233456788999999977655 567


Q ss_pred             CeEEEEECCC
Q psy16005        237 RKVVLYRVPD  246 (248)
Q Consensus       237 ~~i~vw~~~~  246 (248)
                      +.+.+|++..
T Consensus       252 ~~~~~~~~~~  261 (333)
T d1ri6a_         252 SLITVFSVSE  261 (333)
T ss_dssp             TEEEEEEECT
T ss_pred             CeEEEEEEcC
Confidence            8999998754


No 45 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.79  E-value=5.9e-18  Score=128.80  Aligned_cols=223  Identities=7%  Similarity=-0.094  Sum_probs=145.0

Q ss_pred             EEEeCCCCCEEEEeC-----------CcEEEEEecCCCceeeeeecCCc-------ceEEEEECcCCcEEEEEc-cCCeE
Q psy16005         22 VLGGDPKGKNFLYTN-----------GNSVIIRNIENPAISDIYTEHSC-------AVNVAKYSPSGFYIASGD-ISGKV   82 (248)
Q Consensus        22 ~~~~s~~~~~l~~~~-----------~~~v~v~~~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~-~dg~i   82 (248)
                      .++|+|||+.+++.+           ++.|.+||..+++....+..+..       ....++|+|||++|+++. .++.+
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v  148 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeE
Confidence            589999999988753           46799999999998877654322       234689999999998775 57999


Q ss_pred             EEEECCCCceeeeeeccCC-----CCCeeEEEEecCCCEEEEEeCCcE-EEEEcc------CCCCCceeEeCCCCCEEEE
Q psy16005         83 RIWDTVNKEHILKNEFHPI-----GGPIKDIAWSPDNQRMISIVENGA-KVSSLP------IDYEPSSISLDHEHGLVAV  150 (248)
Q Consensus        83 ~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~~-~i~~~~------~~~~~~~~~~~~~~~~~~~  150 (248)
                      .+||+.+++..........     ......+.+++||+.++....+.. ..+...      ....+....+.+++..+..
T Consensus       149 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (368)
T d1mdah_         149 AGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA  228 (368)
T ss_dssp             EEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC
T ss_pred             EEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEe
Confidence            9999999886544333221     123344566777776666544332 222211      1223345566666665554


Q ss_pred             EcCCCeEEEEE--CCceeeeec-------------ccCCCceEEEcCCCCEEEEEcCC---------CcEEEEEcCCCCC
Q psy16005        151 GGADSKISIVE--NGAKVSSLP-------------IDYEPSSISLDHEHGLVAVGGAD---------SKVHIYELNNKSL  206 (248)
Q Consensus       151 ~~~~~~i~~~~--~~~~~~~~~-------------~~~~~~~~~~s~~~~~l~~~~~d---------~~v~i~d~~~~~~  206 (248)
                      ..  +.+++++  .+.......             .......++++|++..+++...+         ..|.+||..+++.
T Consensus       229 ~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~  306 (368)
T d1mdah_         229 VA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT  306 (368)
T ss_dssp             BS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE
T ss_pred             cC--CCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcE
Confidence            43  3344444  222211111             11224568899999877665322         3599999999987


Q ss_pred             CCcccccCCcCeEEEEEcCCCcE--EEEEcCCCeEEEEECCCCC
Q psy16005        207 SPKAELDHLGPVTDCSFSPSNEY--LVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       207 ~~~~~~~~~~~v~~~~~s~~~~~--l~~~~~d~~i~vw~~~~~~  248 (248)
                      +..+.  +...+.+++|+|||+.  ++++..++.|++||..++|
T Consensus       307 ~~~~~--~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk  348 (368)
T d1mdah_         307 SGPIS--NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ  348 (368)
T ss_dssp             EECCE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred             eEEec--CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC
Confidence            65554  4457899999999973  4566778999999998875


No 46 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.77  E-value=8.9e-17  Score=121.23  Aligned_cols=207  Identities=9%  Similarity=-0.015  Sum_probs=137.0

Q ss_pred             CcEEEEeCCCCCEEEEeC-----------CcEEEEEecCCCceeeeeecCCc-------ceEEEEECcCCcEEEEEc--c
Q psy16005         19 QPIVLGGDPKGKNFLYTN-----------GNSVIIRNIENPAISDIYTEHSC-------AVNVAKYSPSGFYIASGD--I   78 (248)
Q Consensus        19 ~v~~~~~s~~~~~l~~~~-----------~~~v~v~~~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~--~   78 (248)
                      ....++|||||++|++++           ++.|++||+.+++....+..+..       ....++|+|++++++.++  .
T Consensus        48 ~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~  127 (355)
T d2bbkh_          48 FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP  127 (355)
T ss_dssp             SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred             CCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCC
Confidence            344789999999887643           57899999999988876653322       234678999999887764  4


Q ss_pred             CCeEEEEECCCCceeeeeeccCC-----CCCeeEEEEec--------------------------------------CCC
Q psy16005         79 SGKVRIWDTVNKEHILKNEFHPI-----GGPIKDIAWSP--------------------------------------DNQ  115 (248)
Q Consensus        79 dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~--------------------------------------~~~  115 (248)
                      +..+.+|+..+++..........     ......+.+++                                      ++.
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (355)
T d2bbkh_         128 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG  207 (355)
T ss_dssp             SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred             CceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCC
Confidence            57899999988764322111100     01112233344                                      444


Q ss_pred             EEEEEeCCc-EEEEEccCC----------------------CCCceeEeCCCCCEEEEEcCC----------CeEEEEE-
Q psy16005        116 RMISIVENG-AKVSSLPID----------------------YEPSSISLDHEHGLVAVGGAD----------SKISIVE-  161 (248)
Q Consensus       116 ~l~~~~~~~-~~i~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~----------~~i~~~~-  161 (248)
                      .++.++.++ +.+|++...                      .....+++++++..++....+          ..|.+|| 
T Consensus       208 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~  287 (355)
T d2bbkh_         208 RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA  287 (355)
T ss_dssp             EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred             eEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeC
Confidence            444444333 356665322                      123457788888877765433          3688999 


Q ss_pred             -CCceeeeecccCCCceEEEcCCCC--EEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCC
Q psy16005        162 -NGAKVSSLPIDYEPSSISLDHEHG--LVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS  226 (248)
Q Consensus       162 -~~~~~~~~~~~~~~~~~~~s~~~~--~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~  226 (248)
                       .++.+..++....+.+++|+|||+  +++++..|+.|++||+++++.+..+. .+......+.+.++
T Consensus       288 ~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~-~~G~~p~~i~~~d~  354 (355)
T d2bbkh_         288 KTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN-QLGHGPQVITTADM  354 (355)
T ss_dssp             TTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC-CCCSSCCEEECCCC
T ss_pred             CCCcEEEEecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEe-CcCCCccEEEeCCC
Confidence             567777777777789999999998  45667789999999999999876554 34444555555544


No 47 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.74  E-value=2.5e-16  Score=123.48  Aligned_cols=105  Identities=12%  Similarity=0.049  Sum_probs=80.8

Q ss_pred             cccCCcEEEEeCCCCCEEEEeC----------CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEE
Q psy16005         15 TQRGQPIVLGGDPKGKNFLYTN----------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRI   84 (248)
Q Consensus        15 ~~~~~v~~~~~s~~~~~l~~~~----------~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i   84 (248)
                      .+...|.++.|||||++|++++          ++.+++||+.+++.. .+..+...+..+.|||||+.+|.. .++.+.+
T Consensus        59 ~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~-~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~  136 (470)
T d2bgra1          59 EFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYV  136 (470)
T ss_dssp             TSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEE
T ss_pred             hccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCccc-ccccCCccccccccccCcceeeEe-ecccceE
Confidence            3456799999999999999874          367899999988754 467888999999999999999985 5679999


Q ss_pred             EECCCCceeeeeecc----------------CCCCCeeEEEEecCCCEEEEEe
Q psy16005         85 WDTVNKEHILKNEFH----------------PIGGPIKDIAWSPDNQRMISIV  121 (248)
Q Consensus        85 wd~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~~~~  121 (248)
                      |+..+++........                ...+....+.|+|||++|+...
T Consensus       137 ~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~  189 (470)
T d2bgra1         137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ  189 (470)
T ss_dssp             ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred             EECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeE
Confidence            999888653221110                0123345688999999999875


No 48 
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=99.68  E-value=1.7e-14  Score=110.14  Aligned_cols=208  Identities=8%  Similarity=-0.019  Sum_probs=142.0

Q ss_pred             CcEEEEEecCCCceeeeeec------------------------------CCcceEEEEECcCCcEEEEE-ccCCeEEEE
Q psy16005         37 GNSVIIRNIENPAISDIYTE------------------------------HSCAVNVAKYSPSGFYIASG-DISGKVRIW   85 (248)
Q Consensus        37 ~~~v~v~~~~~~~~~~~~~~------------------------------~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw   85 (248)
                      +|.|++|++.+++.++.+.-                              |.........+|||++|++. ..+.+|.++
T Consensus        20 sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~~rVavI   99 (441)
T d1qnia2          20 QGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVARI   99 (441)
T ss_dssp             TCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTTTEEEEE
T ss_pred             CCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCCCEEEEE
Confidence            88999999988877665421                              22234455567899988655 577899999


Q ss_pred             ECCCCceeeeeeccCCCCCeeEEEEecCCCE--EEEEeCCcE---------------------------EEEEccCCCCC
Q psy16005         86 DTVNKEHILKNEFHPIGGPIKDIAWSPDNQR--MISIVENGA---------------------------KVSSLPIDYEP  136 (248)
Q Consensus        86 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~~~~---------------------------~i~~~~~~~~~  136 (248)
                      |+++.+......++ +...+..++|+|+|+.  ++..+++.+                           ..|.+..+..+
T Consensus       100 Dl~t~k~~~ii~iP-~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p  178 (441)
T d1qnia2         100 RLDIMKTDKITHIP-NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNL  178 (441)
T ss_dssp             ETTTTEEEEEEECT-TCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEESSCC
T ss_pred             ECCCCcEeeEEecC-CCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEecCCCc
Confidence            99998765433333 4577899999999984  444444332                           22444456678


Q ss_pred             ceeEeCCCCCEEEEEcCCC-----------------------------------------eEEEEE--CCceeeeecccC
Q psy16005        137 SSISLDHEHGLVAVGGADS-----------------------------------------KISIVE--NGAKVSSLPIDY  173 (248)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~-----------------------------------------~i~~~~--~~~~~~~~~~~~  173 (248)
                      ..+.++|+|+++++.+.+.                                         .+.+++  ..+.+..++...
T Consensus       179 ~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgk  258 (441)
T d1qnia2         179 DNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPK  258 (441)
T ss_dssp             CCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBS
T ss_pred             cceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCC
Confidence            8999999999888765432                                         222332  223456667777


Q ss_pred             CCceEEEcCCCCEEEE-EcCCCcEEEEEcCCCCCCC-------ccccc---CCcCeEEEEEcCCCcEEEEEcCCCeEEEE
Q psy16005        174 EPSSISLDHEHGLVAV-GGADSKVHIYELNNKSLSP-------KAELD---HLGPVTDCSFSPSNEYLVASDAHRKVVLY  242 (248)
Q Consensus       174 ~~~~~~~s~~~~~l~~-~~~d~~v~i~d~~~~~~~~-------~~~~~---~~~~v~~~~~s~~~~~l~~~~~d~~i~vw  242 (248)
                      .+..+.++|||+++++ +..+++|.+||+++.+...       ....+   ..-.....+|+++|..+.+..-|..|..|
T Consensus       259 sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw  338 (441)
T d1qnia2         259 NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKW  338 (441)
T ss_dssp             SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred             CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEe
Confidence            7899999999998765 5678999999987532100       00001   11123556899999888888899999999


Q ss_pred             ECC
Q psy16005        243 RVP  245 (248)
Q Consensus       243 ~~~  245 (248)
                      ++.
T Consensus       339 ~~~  341 (441)
T d1qnia2         339 NIA  341 (441)
T ss_dssp             EHH
T ss_pred             ccc
Confidence            963


No 49 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.67  E-value=5.1e-14  Score=106.68  Aligned_cols=197  Identities=15%  Similarity=0.160  Sum_probs=137.0

Q ss_pred             cCCcEEEEeCCCCCEEEEe--CCcEEEEEecCCCceeeeeecC------CcceEEEEECcCCcEEEEEccCCeEEEEECC
Q psy16005         17 RGQPIVLGGDPKGKNFLYT--NGNSVIIRNIENPAISDIYTEH------SCAVNVAKYSPSGFYIASGDISGKVRIWDTV   88 (248)
Q Consensus        17 ~~~v~~~~~s~~~~~l~~~--~~~~v~v~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~   88 (248)
                      ...+.++.++|+|+.++.+  .|+.+.+|+...++.......+      ........+++++.+ +..+.++.+.+|+..
T Consensus       164 ~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~  242 (373)
T d2madh_         164 LSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI-VWPVYSGKILQADIS  242 (373)
T ss_pred             eccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceE-EEecCCceEEEEEcC
Confidence            3456788999999876543  3899999999887766554322      222345556666554 455678999999998


Q ss_pred             CCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccCCCCCceeEeCCCCCEEEEEcCCCeEEEEE--CCcee
Q psy16005         89 NKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKISIVE--NGAKV  166 (248)
Q Consensus        89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~  166 (248)
                      ............+........+.|.+...+..+.++..++.           ..+++..++....++.+.+||  .++.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~~~~~~~~~~~~~~v~~~d~~t~~~~  311 (373)
T d2madh_         243 AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYL-----------LTSEQSAWKLHAAAKEVTSVTGLVGQTS  311 (373)
T ss_pred             CCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEE-----------ecCCCceEEeecCCCeEEEEECCCCcEE
Confidence            87654444444444555555566655555555544433322           234456677788889999999  67778


Q ss_pred             eeecccCCCceEEEcCCCCE--EEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCC
Q psy16005        167 SSLPIDYEPSSISLDHEHGL--VAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS  226 (248)
Q Consensus       167 ~~~~~~~~~~~~~~s~~~~~--l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~  226 (248)
                      ..+.....+..++|+|||+.  +++++.|+.|++||+.+++.+..+. .+....+.+++.++
T Consensus       312 ~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~-~~g~~P~~l~~~~~  372 (373)
T d2madh_         312 SQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV-ELGSGPQVLSVMNE  372 (373)
T ss_pred             EEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEC-CCCCCCcEEEEecC
Confidence            88888888999999999984  4678899999999999999876654 45556677776543


No 50 
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=99.65  E-value=2.8e-15  Score=114.49  Aligned_cols=216  Identities=11%  Similarity=0.075  Sum_probs=150.5

Q ss_pred             ccCCcEEEEeCCCCCEEEEeC--CcEEEEEecCCCceeeeee-cCCcceEEEEECcCCcE--EEEEccCC----------
Q psy16005         16 QRGQPIVLGGDPKGKNFLYTN--GNSVIIRNIENPAISDIYT-EHSCAVNVAKYSPSGFY--IASGDISG----------   80 (248)
Q Consensus        16 ~~~~v~~~~~s~~~~~l~~~~--~~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~--l~~~~~dg----------   80 (248)
                      |.........+|||++|++..  ++.|.++|+++++....+. .+...+..++|+|+++.  ++..+.+.          
T Consensus        70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~  149 (441)
T d1qnia2          70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDF  149 (441)
T ss_dssp             CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCC
T ss_pred             cCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccccc
Confidence            444566677789999998874  7899999999998877665 35677899999999984  44333321          


Q ss_pred             -------eEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc----------------EEEE---------
Q psy16005         81 -------KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG----------------AKVS---------  128 (248)
Q Consensus        81 -------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----------------~~i~---------  128 (248)
                             .+..+|..+.+.......   ...+..++|+|||+++++.+.+.                +.+.         
T Consensus       150 ~~~~~~~~~~~iD~~t~~v~~qI~v---~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~  226 (441)
T d1qnia2         150 SLDNSYTMFTAIDAETMDVAWQVIV---DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAV  226 (441)
T ss_dssp             CGGGEEEEEEEEETTTCSEEEEEEE---SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHH
T ss_pred             ccccccceEEeecCccceeeEEEec---CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEe
Confidence                   235578777765433333   24578899999999998886431                1111         


Q ss_pred             --------------------------EccCCCCCceeEeCCCCCEEE-EEcCCCeEEEEECCceeeee------------
Q psy16005        129 --------------------------SLPIDYEPSSISLDHEHGLVA-VGGADSKISIVENGAKVSSL------------  169 (248)
Q Consensus       129 --------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~------------  169 (248)
                                                .++.+..+..+.++|+|++++ ++..++++.+||..+....+            
T Consensus       227 ~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~  306 (441)
T d1qnia2         227 KAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVA  306 (441)
T ss_dssp             HTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEE
T ss_pred             cCCCEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEe
Confidence                                      123345678899999999765 56789999999943322111            


Q ss_pred             --cccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCC------CCC---C-----CcccccCCcCeEEEEEcCCCcEEEEE
Q psy16005        170 --PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN------KSL---S-----PKAELDHLGPVTDCSFSPSNEYLVAS  233 (248)
Q Consensus       170 --~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~------~~~---~-----~~~~~~~~~~v~~~~~s~~~~~l~~~  233 (248)
                        .....+...+|+++|..+.+...|.+|..|++..      +..   +     .....+|...+.+..++|||++|+++
T Consensus       307 ~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~  386 (441)
T d1qnia2         307 EPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVL  386 (441)
T ss_dssp             CCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEE
T ss_pred             ecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEec
Confidence              1222345568999998888888999999999842      111   1     11124677778888899999999999


Q ss_pred             c
Q psy16005        234 D  234 (248)
Q Consensus       234 ~  234 (248)
                      +
T Consensus       387 ~  387 (441)
T d1qnia2         387 S  387 (441)
T ss_dssp             E
T ss_pred             C
Confidence            3


No 51 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.61  E-value=2.6e-14  Score=111.93  Aligned_cols=203  Identities=14%  Similarity=0.113  Sum_probs=133.5

Q ss_pred             cEEEEeCCCCCEEEEeCCcEEEEEecCCCceeeeee-----cCCcceEEEEECcCCcEEEEEc---------cCCeEEEE
Q psy16005         20 PIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYT-----EHSCAVNVAKYSPSGFYIASGD---------ISGKVRIW   85 (248)
Q Consensus        20 v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~---------~dg~i~iw   85 (248)
                      ...+.|.++++++. -.++.+.+||+.+++....+.     .|...|.++.|||||++|+.++         .++.+.+|
T Consensus        19 ~~~~~W~~d~~~~~-~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~   97 (470)
T d2bgra1          19 LYSLRWISDHEYLY-KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY   97 (470)
T ss_dssp             CCCCEECSSSEEEE-ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred             ccCCEeCCCCEEEE-EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence            34688999998665 457789999999998765443     4557899999999999999874         35788999


Q ss_pred             ECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccCCC----------------------------CCc
Q psy16005         86 DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPIDY----------------------------EPS  137 (248)
Q Consensus        86 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~~----------------------------~~~  137 (248)
                      |+.+++.   ..+..+...+..+.|+|||+.++...++.+.+|+.....                            ...
T Consensus        98 d~~~~~~---~~l~~~~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~  174 (470)
T d2bgra1          98 DLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS  174 (470)
T ss_dssp             ETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred             ECCCCcc---cccccCCccccccccccCcceeeEeecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCcc
Confidence            9998864   356677889999999999999999998888888764321                            224


Q ss_pred             eeEeCCCCCEEEEEcCCCe-EEEEE---CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCccc--
Q psy16005        138 SISLDHEHGLVAVGGADSK-ISIVE---NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE--  211 (248)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~-i~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~--  211 (248)
                      .+.|+|+|+.++....|.. +..+.   ......   .......+.+...+    ....+..+.+|++.+++......  
T Consensus       175 ~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~g----~~~~~~~~~v~~~~~~~~~~~~~~~  247 (470)
T d2bgra1         175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESL---QYPKTVRVPYPKAG----AVNPTVKFFVVNTDSLSSVTNATSI  247 (470)
T ss_dssp             CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTC---SSCEEEEEECCBTT----SCCCEEEEEEEEGGGCCSSSCCCEE
T ss_pred             ccEECCCCCccceeEecCCcCceEEEEeeccCCC---CCCeeeeecccccc----ccCCcceEEEEECCCcceeeecccc
Confidence            4679999999888654432 32222   110000   00000111111111    11223467888988776543221  


Q ss_pred             --------ccCCcCeEEEEEcCCCcEEEEE
Q psy16005        212 --------LDHLGPVTDCSFSPSNEYLVAS  233 (248)
Q Consensus       212 --------~~~~~~v~~~~~s~~~~~l~~~  233 (248)
                              ......+..+.|.++++.++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  277 (470)
T d2bgra1         248 QITAPASMLIGDHYLCDVTWATQERISLQW  277 (470)
T ss_dssp             EECCCHHHHTSCEEEEEEEEEETTEEEEEE
T ss_pred             ccCCccccCCCCceEEEEEEcCCCceeEEE
Confidence                    1233456789999998866543


No 52 
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=99.58  E-value=5e-12  Score=93.05  Aligned_cols=222  Identities=11%  Similarity=0.050  Sum_probs=142.3

Q ss_pred             eecccccccccCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEE
Q psy16005          7 YIFATLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW   85 (248)
Q Consensus         7 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw   85 (248)
                      +++..+|..+  .+..++++|||+++++.. ++.|+.++.. ++ ...+......+.+++|+|+|+++++...++.+..+
T Consensus        19 ~v~~~~p~~~--~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~   94 (302)
T d2p4oa1          19 KIITSFPVNT--FLENLASAPDGTIFVTNHEVGEIVSITPD-GN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVV   94 (302)
T ss_dssp             EEEEEECTTC--CEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             cEEEECCCCC--CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CC-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEE
Confidence            3455565533  477899999999888876 8889888855 33 33344566789999999999998888888888888


Q ss_pred             ECCCCceeee-eeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccCCC----------------------CCceeEeC
Q psy16005         86 DTVNKEHILK-NEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPIDY----------------------EPSSISLD  142 (248)
Q Consensus        86 d~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~~----------------------~~~~~~~~  142 (248)
                      +......... ............+++.++++++++....+ .+|.+....                      .+..+.++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~  173 (302)
T d2p4oa1          95 SLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRG-AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF  173 (302)
T ss_dssp             EEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTT-EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE
T ss_pred             EecccccceeeccccCCccccceeEEccCCCEEeeccccc-cceeeeccCCcceeEecCCccceeeccCccccccccccc
Confidence            7654332111 11122345688999999998776655433 333322111                      11233333


Q ss_pred             CCCCEEEEEcCCCeEEEEECCc--e---eeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcC
Q psy16005        143 HEHGLVAVGGADSKISIVENGA--K---VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP  217 (248)
Q Consensus       143 ~~~~~~~~~~~~~~i~~~~~~~--~---~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~  217 (248)
                      . +.++++....+.|..++...  .   .........+..++++++|+++++...++.|..++..............-..
T Consensus       174 ~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~  252 (302)
T d2p4oa1         174 G-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIG  252 (302)
T ss_dssp             T-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTT
T ss_pred             C-CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCC
Confidence            2 34556667778888877221  1   1112234456789999999988887788999999876543211111123345


Q ss_pred             eEEEEE---cCCCcEEEEEc
Q psy16005        218 VTDCSF---SPSNEYLVASD  234 (248)
Q Consensus       218 v~~~~~---s~~~~~l~~~~  234 (248)
                      .++++|   ++|++.|+.++
T Consensus       253 pt~vafg~~~~D~~~Lyvtt  272 (302)
T d2p4oa1         253 STAVAFGQTEGDCTAIYVVT  272 (302)
T ss_dssp             EEEEEECCSTTTTTEEEEEE
T ss_pred             ceEEEEcCCCCCCCEEEEEC
Confidence            799999   67888787654


No 53 
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.56  E-value=1.1e-11  Score=89.23  Aligned_cols=225  Identities=11%  Similarity=0.065  Sum_probs=145.3

Q ss_pred             ccCCcEEEEeCCCCCEEEEeC--CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCcee
Q psy16005         16 QRGQPIVLGGDPKGKNFLYTN--GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI   93 (248)
Q Consensus        16 ~~~~v~~~~~s~~~~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~   93 (248)
                      +.-.+..++++++|+.+++..  .+.+..++............-......++++++++++++....+.+++++-.+....
T Consensus        12 ~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~   91 (260)
T d1rwia_          12 FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV   91 (260)
T ss_dssp             SCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEE
T ss_pred             CcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceee
Confidence            345678999999999777653  567777765543322222121234578899999998887777777776665544422


Q ss_pred             eeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEc----------cCCCCCceeEeCCCCCEEEEEcCCCeEEEEEC
Q psy16005         94 LKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSL----------PIDYEPSSISLDHEHGLVAVGGADSKISIVEN  162 (248)
Q Consensus        94 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  162 (248)
                        .... .-..+.+++++++++.+++-..+. ....+.          ..-..+..++++++++++++...++.|..++.
T Consensus        92 --~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~  168 (260)
T d1rwia_          92 --LPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA  168 (260)
T ss_dssp             --CCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred             --eeee-eeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeecccccccccccc
Confidence              2222 235678999999988766543222 222221          12245678999999999888888899999983


Q ss_pred             -Cceeeeec--ccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeE
Q psy16005        163 -GAKVSSLP--IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKV  239 (248)
Q Consensus       163 -~~~~~~~~--~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i  239 (248)
                       +.....+.  .-..+..++++++|+++++-...+.|..++....... ......-.....++++++|..+++-..++.|
T Consensus       169 ~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~-~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI  247 (260)
T d1rwia_         169 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-VLPFTGLNTPLAVAVDSDRTVYVADRGNDRV  247 (260)
T ss_dssp             TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCE-ECCCCSCCCEEEEEECTTCCEEEEEGGGTEE
T ss_pred             ccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEE-EEccCCCCCeEEEEEeCCCCEEEEECCCCEE
Confidence             33333332  2345688999999998888888888888876654321 2211233467899999999877776667777


Q ss_pred             EEEEC
Q psy16005        240 VLYRV  244 (248)
Q Consensus       240 ~vw~~  244 (248)
                      +.++.
T Consensus       248 ~~i~~  252 (260)
T d1rwia_         248 VKLTS  252 (260)
T ss_dssp             EEECC
T ss_pred             EEEeC
Confidence            65543


No 54 
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=99.55  E-value=2e-12  Score=97.77  Aligned_cols=231  Identities=13%  Similarity=0.034  Sum_probs=139.3

Q ss_pred             ccCCcEEEEeCCCCCEEEEeCCcEEEEEecCCC-ceeeee-ecCCcceEEEEECcCCcEE--EEEc-cCCeEEEEECCCC
Q psy16005         16 QRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENP-AISDIY-TEHSCAVNVAKYSPSGFYI--ASGD-ISGKVRIWDTVNK   90 (248)
Q Consensus        16 ~~~~v~~~~~s~~~~~l~~~~~~~v~v~~~~~~-~~~~~~-~~~~~~v~~~~~s~~~~~l--~~~~-~dg~i~iwd~~~~   90 (248)
                      ....+..|+|+|++++|+++..+.+..|.+... ...... .........+.++++++.+  +++. ..++|..+.+...
T Consensus        38 ~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~  117 (365)
T d1jofa_          38 QDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF  117 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred             CCCCCCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC
Confidence            344566799999999999888777777766532 222211 1122334567788888754  3332 2355555443211


Q ss_pred             c-eeeee--------------eccCCCCCeeEEEEecCCCEEEEEeC--CcEEEEEcc---------------CCCCCce
Q psy16005         91 E-HILKN--------------EFHPIGGPIKDIAWSPDNQRMISIVE--NGAKVSSLP---------------IDYEPSS  138 (248)
Q Consensus        91 ~-~~~~~--------------~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~~i~~~~---------------~~~~~~~  138 (248)
                      . .....              ........+.++.|+|||++++++..  +.+.++++.               ....++.
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~  197 (365)
T d1jofa_         118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW  197 (365)
T ss_dssp             CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred             CCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEE
Confidence            1 00000              00112234789999999999999874  345555432               1345778


Q ss_pred             eEeCCCCCEEEE-EcCCCeEEEEE--CCce--e---eeecc---------------cCCCceEEEcCCCCEEEEEcC---
Q psy16005        139 ISLDHEHGLVAV-GGADSKISIVE--NGAK--V---SSLPI---------------DYEPSSISLDHEHGLVAVGGA---  192 (248)
Q Consensus       139 ~~~~~~~~~~~~-~~~~~~i~~~~--~~~~--~---~~~~~---------------~~~~~~~~~s~~~~~l~~~~~---  192 (248)
                      +.++|+++++.+ ...++.|.+|+  .+..  .   ...+.               ......+.++|||++|+++..   
T Consensus       198 i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~  277 (365)
T d1jofa_         198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK  277 (365)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred             EEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCC
Confidence            999999997754 55678899988  2221  1   11111               011346889999999888743   


Q ss_pred             ---CCcEEEEEcCCCCCCCccc-----ccCCcCeEEEEEcC-CCcEEEEE-cCCCeEEEEECCC
Q psy16005        193 ---DSKVHIYELNNKSLSPKAE-----LDHLGPVTDCSFSP-SNEYLVAS-DAHRKVVLYRVPD  246 (248)
Q Consensus       193 ---d~~v~i~d~~~~~~~~~~~-----~~~~~~v~~~~~s~-~~~~l~~~-~~d~~i~vw~~~~  246 (248)
                         .+.|..|++.....+....     .........++++| +|++|+++ ..++.|.+|+++.
T Consensus       278 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~  341 (365)
T d1jofa_         278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD  341 (365)
T ss_dssp             TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred             CccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeC
Confidence               2237777776543221111     01234567899998 79988777 4579999998753


No 55 
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=99.54  E-value=5.2e-11  Score=87.92  Aligned_cols=226  Identities=10%  Similarity=0.101  Sum_probs=148.9

Q ss_pred             CcEEEEeCCCCCEEEEeC--------CcEEEEEecCCCceeeeeec----CCcceEEEEECcCCcEEEEEccCCeEEEEE
Q psy16005         19 QPIVLGGDPKGKNFLYTN--------GNSVIIRNIENPAISDIYTE----HSCAVNVAKYSPSGFYIASGDISGKVRIWD   86 (248)
Q Consensus        19 ~v~~~~~s~~~~~l~~~~--------~~~v~v~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd   86 (248)
                      .+..++|.|+|+++++..        ++.|..||..+++.......    .......++|.++++.++++.....+...+
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~   98 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ   98 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence            366789999999887653        35788999887765433221    122356899999998888887777888899


Q ss_pred             CCCCceeeeee-ccCCC-CCeeEEEEecCCCEEEEEeCC--------------cEEEEEccCCC----------CCceeE
Q psy16005         87 TVNKEHILKNE-FHPIG-GPIKDIAWSPDNQRMISIVEN--------------GAKVSSLPIDY----------EPSSIS  140 (248)
Q Consensus        87 ~~~~~~~~~~~-~~~~~-~~v~~~~~~~~~~~l~~~~~~--------------~~~i~~~~~~~----------~~~~~~  140 (248)
                      ...+....... ..+.. .....++++++|+..++....              .-.+|.+..+.          .+..++
T Consensus        99 ~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~~~~~~pNGi~  178 (314)
T d1pjxa_          99 TDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIA  178 (314)
T ss_dssp             TTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEEEEE
T ss_pred             CCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCceeEeeCCcceeeeeE
Confidence            87654321111 11111 135789999999887764321              12456554332          234677


Q ss_pred             eCCCCC-----EEEEEcCCCeEEEEE---CCcee-----eeecc--cCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCC
Q psy16005        141 LDHEHG-----LVAVGGADSKISIVE---NGAKV-----SSLPI--DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS  205 (248)
Q Consensus       141 ~~~~~~-----~~~~~~~~~~i~~~~---~~~~~-----~~~~~--~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~  205 (248)
                      +++++.     ++++.+..+.|..|+   .+...     ..+..  ...+..++++++|++.++....+.|.+||.++++
T Consensus       179 ~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~  258 (314)
T d1pjxa_         179 VRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ  258 (314)
T ss_dssp             EEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred             ECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCE
Confidence            877654     555667788888876   22221     11111  1235679999999987777778899999998877


Q ss_pred             CCCcccccCCcCeEEEEEcCCCcEE-EEEcCCCeEEEEECC
Q psy16005        206 LSPKAELDHLGPVTDCSFSPSNEYL-VASDAHRKVVLYRVP  245 (248)
Q Consensus       206 ~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~vw~~~  245 (248)
                      ...... .....+++++|.||++.| ++.+.+|.|...++.
T Consensus       259 ~~~~i~-~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         259 PKMRIR-CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             CSEEEE-CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             EEEEEE-CCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            654443 234568999999999755 556677888888764


No 56 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.51  E-value=6.2e-11  Score=85.39  Aligned_cols=202  Identities=9%  Similarity=0.048  Sum_probs=123.5

Q ss_pred             EEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccC---CeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCC
Q psy16005         39 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ  115 (248)
Q Consensus        39 ~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  115 (248)
                      .|+|.|.+..+... +..+...+.+.+|||||+.||.....   ..+.+.+...+...   .+..+........|+|+|+
T Consensus        20 ~l~i~d~dG~~~~~-l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~spdg~   95 (269)
T d2hqsa1          20 ELRVSDYDGYNQFV-VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGS   95 (269)
T ss_dssp             EEEEEETTSCSCEE-EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSS
T ss_pred             EEEEEcCCCCCcEE-EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee---EEeeeecccccceecCCCC
Confidence            68888876544444 44567788999999999999876443   24666777666532   3344567888999999999


Q ss_pred             EEEEEeCCc--EEEEEcc-----------CCCCCceeEeCCCCCEEE-EEcCCCe--EEEEEC-Cceee-eecccCCCce
Q psy16005        116 RMISIVENG--AKVSSLP-----------IDYEPSSISLDHEHGLVA-VGGADSK--ISIVEN-GAKVS-SLPIDYEPSS  177 (248)
Q Consensus       116 ~l~~~~~~~--~~i~~~~-----------~~~~~~~~~~~~~~~~~~-~~~~~~~--i~~~~~-~~~~~-~~~~~~~~~~  177 (248)
                      .++......  ..++...           .........+++++..+. +...++.  +...+. ..... ..........
T Consensus        96 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~  175 (269)
T d2hqsa1          96 KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQD  175 (269)
T ss_dssp             EEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEE
T ss_pred             eeeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccc
Confidence            998876433  2222221           112222334556655444 4444554  444442 22222 2222333456


Q ss_pred             EEEcCCCCEEEEEcCC-Cc--EEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcC---CCeEEEEECCCC
Q psy16005        178 ISLDHEHGLVAVGGAD-SK--VHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDA---HRKVVLYRVPDF  247 (248)
Q Consensus       178 ~~~s~~~~~l~~~~~d-~~--v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---d~~i~vw~~~~~  247 (248)
                      ..|+|+++.++..+.+ +.  +.+.+...+..  ... .+........|||||+.|+..+.   ...|++++++.+
T Consensus       176 ~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~~-~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~  248 (269)
T d2hqsa1         176 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVL-SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR  248 (269)
T ss_dssp             EEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EEC-CCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred             cccccccceeEEEeecCCceeeeEeecccccc--eEe-ecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCC
Confidence            7899999988876654 34  44445444433  232 34556778899999999876543   357888888754


No 57 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.50  E-value=3.1e-11  Score=86.99  Aligned_cols=203  Identities=15%  Similarity=0.231  Sum_probs=128.5

Q ss_pred             cCCcEEEEeCCCCCEEEEeC----CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEcc-CCe--EEEEECCC
Q psy16005         17 RGQPIVLGGDPKGKNFLYTN----GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-SGK--VRIWDTVN   89 (248)
Q Consensus        17 ~~~v~~~~~s~~~~~l~~~~----~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~--i~iwd~~~   89 (248)
                      ...+.+-+|||||+.||+..    ...+.+.+...+.... +..+........|+|+|+.++.... ++.  +..+....
T Consensus        38 ~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~  116 (269)
T d2hqsa1          38 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS  116 (269)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT
T ss_pred             CCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeE-EeeeecccccceecCCCCeeeEeeecCCccceeeccccc
Confidence            45567889999999999864    3467777777665544 4467788889999999998886543 333  33333333


Q ss_pred             CceeeeeeccCCCCCeeEEEEecCCCEEEEEeC-Cc-EEEEEccCCC-----------CCceeEeCCCCCEEEEEcCCC-
Q psy16005         90 KEHILKNEFHPIGGPIKDIAWSPDNQRMISIVE-NG-AKVSSLPIDY-----------EPSSISLDHEHGLVAVGGADS-  155 (248)
Q Consensus        90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~-~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-  155 (248)
                      ...   ..............++++++.++..+. ++ ..++......           ......++|+++.++..+.++ 
T Consensus       117 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~  193 (269)
T d2hqsa1         117 GQI---RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGG  193 (269)
T ss_dssp             CCE---EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred             ccc---eeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccccceeEEEeecCC
Confidence            221   222233445556677888776666553 32 3444443221           223557899999887765443 


Q ss_pred             e--EEEEE-CCceeeeecccCCCceEEEcCCCCEEEEEcC---CCcEEEEEcCCCCCCCcccccCCcCeEEEEEcC
Q psy16005        156 K--ISIVE-NGAKVSSLPIDYEPSSISLDHEHGLVAVGGA---DSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP  225 (248)
Q Consensus       156 ~--i~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~---d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~  225 (248)
                      .  +.+.+ .......+..........|||||+.|+..+.   ...|+++++..+.... +. ...+.+...+|||
T Consensus       194 ~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~-lt-~~~g~~~~p~WSP  267 (269)
T d2hqsa1         194 QQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR-LP-ATDGQVKFPAWSP  267 (269)
T ss_dssp             CEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE-CC-CSSSEEEEEEECC
T ss_pred             ceeeeEeecccccceEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-Ee-CCCCcEEeEEeCC
Confidence            3  34445 3333444445555677899999998876553   3468999998776532 32 3456788899998


No 58 
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.46  E-value=5e-10  Score=81.18  Aligned_cols=225  Identities=8%  Similarity=0.119  Sum_probs=147.2

Q ss_pred             CCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeec------CCcceEEEEECcC-CcEEEE-EccCCeEEEEECC
Q psy16005         18 GQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTE------HSCAVNVAKYSPS-GFYIAS-GDISGKVRIWDTV   88 (248)
Q Consensus        18 ~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~------~~~~v~~~~~s~~-~~~l~~-~~~dg~i~iwd~~   88 (248)
                      ..+..++++|+|+++++-. .+.|++||.+ ++.+..+..      .......+++.++ +..+++ .+.++.|..++..
T Consensus        23 ~~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  101 (279)
T d1q7fa_          23 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY  101 (279)
T ss_dssp             SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred             CCccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc
Confidence            4578999999999776644 7899999954 666555421      1112345565554 444443 3455678888764


Q ss_pred             CCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEcc-----------CCCCCceeEeCCCCCEEEEEcCCCe
Q psy16005         89 NKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLP-----------IDYEPSSISLDHEHGLVAVGGADSK  156 (248)
Q Consensus        89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~  156 (248)
                       ++..... -.........+++.++++.+++..... +.+++..           ....+..+++.++++++++....+.
T Consensus       102 -g~~~~~~-~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~  179 (279)
T d1q7fa_         102 -GQFVRKF-GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC  179 (279)
T ss_dssp             -SCEEEEE-CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred             -ccceeec-CCCcccccceeccccCCcEEEEeeccceeeEeccCCceeecccccccccccceeeeccceeEEeeeccccc
Confidence             3332212 122345678899999888776654433 2222211           1234567788899999999999999


Q ss_pred             EEEEE-CCceeeeeccc---CCCceEEEcCCCCEEEEEcC-CCcEEEEEcCCCCCCCccccc-CCcCeEEEEEcCCCcEE
Q psy16005        157 ISIVE-NGAKVSSLPID---YEPSSISLDHEHGLVAVGGA-DSKVHIYELNNKSLSPKAELD-HLGPVTDCSFSPSNEYL  230 (248)
Q Consensus       157 i~~~~-~~~~~~~~~~~---~~~~~~~~s~~~~~l~~~~~-d~~v~i~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l  230 (248)
                      |++|+ .++.+..+...   ..+..++++|+|+++++-.. ++.|.+|+. +++.+..+... .......+++.|||.++
T Consensus       180 V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~l~  258 (279)
T d1q7fa_         180 VKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVV  258 (279)
T ss_dssp             EEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEE
T ss_pred             eeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCCcEE
Confidence            99999 67777666432   23688999999997766543 457999985 45543333222 23457899999999755


Q ss_pred             EEEcCCCeEEEEECCCC
Q psy16005        231 VASDAHRKVVLYRVPDF  247 (248)
Q Consensus       231 ~~~~~d~~i~vw~~~~~  247 (248)
                      + ++.++.|++|+....
T Consensus       259 V-~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         259 L-ASKDYRLYIYRYVQL  274 (279)
T ss_dssp             E-EETTTEEEEEECSCC
T ss_pred             E-EeCCCeEEEEEeeee
Confidence            5 557899999998764


No 59 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.45  E-value=1.7e-12  Score=98.26  Aligned_cols=198  Identities=9%  Similarity=0.032  Sum_probs=126.9

Q ss_pred             cEEEEeCCCCCEEEEeC--CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeee-
Q psy16005         20 PIVLGGDPKGKNFLYTN--GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN-   96 (248)
Q Consensus        20 v~~~~~s~~~~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-   96 (248)
                      ...++|+|||+++++++  ++.+.+||+.+++....+..+.....   +......++..+.||.+.+++.......... 
T Consensus       126 p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~  202 (368)
T d1mdah_         126 VHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAAPAAAGIV  202 (368)
T ss_dssp             TTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSCCCCEEC
T ss_pred             ccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCCceeeeee
Confidence            34689999999998874  78999999999998887765543321   1112345666777888888877655432111 


Q ss_pred             ---eccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccC----------------------CCCCceeEeCCCCCEEEEE
Q psy16005         97 ---EFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPI----------------------DYEPSSISLDHEHGLVAVG  151 (248)
Q Consensus        97 ---~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~----------------------~~~~~~~~~~~~~~~~~~~  151 (248)
                         ....+...+....+.+++..+...+ ..+.+.++..                      ......+++++++..++..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~  281 (368)
T d1mdah_         203 GAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL  281 (368)
T ss_dssp             CCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred             ecccccccccceeecccccCcEEEEecC-CCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEE
Confidence               1222334445566666665544332 2222222211                      1223567888888876654


Q ss_pred             cCC---------CeEEEEE--CCceeeeecccCCCceEEEcCCCC--EEEEEcCCCcEEEEEcCCCCCCCcccccCCcCe
Q psy16005        152 GAD---------SKISIVE--NGAKVSSLPIDYEPSSISLDHEHG--LVAVGGADSKVHIYELNNKSLSPKAELDHLGPV  218 (248)
Q Consensus       152 ~~~---------~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~--~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v  218 (248)
                      ..+         ..+.+||  +++.+..+.....+..++|+|||+  .++++..++.|++||..+++.+..+..+  ...
T Consensus       282 ~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g--~~P  359 (368)
T d1mdah_         282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD--KGP  359 (368)
T ss_dssp             EEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC--SCC
T ss_pred             ecCCCceeecCCceEEEEECCCCcEeEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECC--CCC
Confidence            322         3588898  667777777777789999999997  3456677899999999999987665433  224


Q ss_pred             EEEEE
Q psy16005        219 TDCSF  223 (248)
Q Consensus       219 ~~~~~  223 (248)
                      +.|++
T Consensus       360 ~~l~~  364 (368)
T d1mdah_         360 ESLSV  364 (368)
T ss_dssp             CEEEC
T ss_pred             CEEEE
Confidence            55544


No 60 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.44  E-value=1.2e-10  Score=84.20  Aligned_cols=219  Identities=12%  Similarity=0.081  Sum_probs=124.9

Q ss_pred             EeCCC--CCEEEEeCCcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEcc-C-----CeEEEEECCCCceeee
Q psy16005         24 GGDPK--GKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-S-----GKVRIWDTVNKEHILK   95 (248)
Q Consensus        24 ~~s~~--~~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-----g~i~iwd~~~~~~~~~   95 (248)
                      ..|||  |+.++..+++.|++.|+.+++.. .+..+.+.+...+|||||+.||.... +     ..|.+++..+++....
T Consensus         5 ~~sPdi~G~~v~f~~~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCCDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             ccCCCCCCCEEEEEeCCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            45788  99999998889999999988765 46667788899999999999986532 2     2477778777764321


Q ss_pred             eecc----CCCCCeeEEEEecCCCEEEEEeCCc-----EEEEEccCCC--------CCceeEeCCCCC-EEEEEcCCC--
Q psy16005         96 NEFH----PIGGPIKDIAWSPDNQRMISIVENG-----AKVSSLPIDY--------EPSSISLDHEHG-LVAVGGADS--  155 (248)
Q Consensus        96 ~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~-----~~i~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~--  155 (248)
                      ....    ..........|+|||+.++......     ...+.+....        ....-.+.+++. .++......  
T Consensus        84 t~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (281)
T d1k32a2          84 TYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPH  163 (281)
T ss_dssp             CCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTT
T ss_pred             eecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceeeecCCCeEEEeeccccce
Confidence            1111    1123456788999999998875322     1222222111        111122223332 222221111  


Q ss_pred             -----------eEEEEECCceeeeecccCCCceEEEcCCCCEEEEEcC--CCcEEEEEcCCCCCCCcccccCCcCeEEEE
Q psy16005        156 -----------KISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA--DSKVHIYELNNKSLSPKAELDHLGPVTDCS  222 (248)
Q Consensus       156 -----------~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~--d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~  222 (248)
                                 ........................++++. .+.....  ...|+++|+.+++... +......  ....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~~-lt~~~~~--~~~~  239 (281)
T d1k32a2         164 WKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLRK-HTSFTDY--YPRH  239 (281)
T ss_dssp             STTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCEE-CCCCCSS--CEEE
T ss_pred             eeeeccCCcceeeeeccccceeeccCCccccceeeeeccc-cceecccccccceEEEeCCCCceEE-eecCCCc--cccc
Confidence                       01111122222222333334445556553 2233333  3458888888776533 2212222  3346


Q ss_pred             EcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        223 FSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       223 ~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      |+|||+.|+.. .++.|+++|+++++
T Consensus       240 ~SpDG~~I~f~-~~~~l~~~d~~~g~  264 (281)
T d1k32a2         240 LNTDGRRILFS-KGGSIYIFNPDTEK  264 (281)
T ss_dssp             EEESSSCEEEE-ETTEEEEECTTTCC
T ss_pred             CcCCCCEEEEE-eCCEEEEEECCCCC
Confidence            89999988765 46789999998875


No 61 
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=99.42  E-value=8.6e-10  Score=81.49  Aligned_cols=215  Identities=14%  Similarity=0.129  Sum_probs=139.7

Q ss_pred             CcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEcc----CCeEEEEECCCCcee
Q psy16005         19 QPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI----SGKVRIWDTVNKEHI   93 (248)
Q Consensus        19 ~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~~~~   93 (248)
                      .+..++|.++|+++++-. ++.|+.|+.++++....+.........++++++|+++++...    .+.+...+.......
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~  120 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ  120 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceee
Confidence            346899999998665543 889999998877666655555667889999999998776543    234555555554432


Q ss_pred             eeeeccCCCCCeeEEEEecCCCEEEEEeCC-----cEEEEEccCC-----------CCCceeEeCCCCCEE-EEEcCCCe
Q psy16005         94 LKNEFHPIGGPIKDIAWSPDNQRMISIVEN-----GAKVSSLPID-----------YEPSSISLDHEHGLV-AVGGADSK  156 (248)
Q Consensus        94 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~~i~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~  156 (248)
                      ....-..-...+..+++.++|+..++....     .-.++.+..+           ..+..++++|+++.+ ++-+..+.
T Consensus       121 ~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~  200 (319)
T d2dg1a1         121 DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR  200 (319)
T ss_dssp             EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred             eeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccCCc
Confidence            211111123457789999999866654321     1134444322           234568999999855 55567888


Q ss_pred             EEEEE---CCceeeee--------cccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccc-----cCCcCeEE
Q psy16005        157 ISIVE---NGAKVSSL--------PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL-----DHLGPVTD  220 (248)
Q Consensus       157 i~~~~---~~~~~~~~--------~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~-----~~~~~v~~  220 (248)
                      |..|+   .+......        .....+..++++++|++.++....+.|.+||. .++.+.....     ++...+++
T Consensus       201 I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~  279 (319)
T d2dg1a1         201 LHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTH  279 (319)
T ss_dssp             EEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCE
T ss_pred             eEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceeee
Confidence            99887   22221111        11223568999999998888888899999996 4554433322     24446789


Q ss_pred             EEEcCCCcEEEEEc
Q psy16005        221 CSFSPSNEYLVASD  234 (248)
Q Consensus       221 ~~~s~~~~~l~~~~  234 (248)
                      ++|.|++..+++..
T Consensus       280 ~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         280 PQFIPGTNQLIICS  293 (319)
T ss_dssp             EEECTTSCEEEEEE
T ss_pred             EEEeCCCCEEEEEc
Confidence            99999887666553


No 62 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33  E-value=6.4e-11  Score=92.08  Aligned_cols=216  Identities=13%  Similarity=0.053  Sum_probs=128.6

Q ss_pred             EEEeCCCCCEEEEeCCcEEEEEecCCCceeeeeecC---CcceEEEEECcCCcEEEEE---------ccCCeEEEEECCC
Q psy16005         22 VLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEH---SCAVNVAKYSPSGFYIASG---------DISGKVRIWDTVN   89 (248)
Q Consensus        22 ~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~---------~~dg~i~iwd~~~   89 (248)
                      ...|.+++.++....+|.+.+||+.+++....+...   .-.+....||||+++++..         +..+.+.++|+.+
T Consensus        21 ~~~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~  100 (465)
T d1xfda1          21 EAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH  100 (465)
T ss_dssp             CCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred             CCEEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC
Confidence            357999998876666889999999887764434322   2356778899999988775         3457899999998


Q ss_pred             CceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccCC----------------------------CCCceeEe
Q psy16005         90 KEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPID----------------------------YEPSSISL  141 (248)
Q Consensus        90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~----------------------------~~~~~~~~  141 (248)
                      +..............+....|||||+.++...++.+.+.+....                            .....+.|
T Consensus       101 ~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~W  180 (465)
T d1xfda1         101 GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW  180 (465)
T ss_dssp             CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE
T ss_pred             CceeeccCccCCccccceeeeccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEE
Confidence            87543222333345566789999999999988776655543211                            11134557


Q ss_pred             CCCCCEEEEEcCC-CeEEEEECCceeeeecc-----cCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCccc----
Q psy16005        142 DHEHGLVAVGGAD-SKISIVENGAKVSSLPI-----DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE----  211 (248)
Q Consensus       142 ~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~----  211 (248)
                      +|||+.||....| ..+..+.       +..     ...+..+.+..-|.-    .....+.++|+.++.......    
T Consensus       181 SPDgk~iaf~~~D~s~V~~~~-------~~~~~~~~~p~~~~~~Yp~~G~~----np~~~l~v~d~~~~~~~~~~~~~~~  249 (465)
T d1xfda1         181 SPDGTRLAYAAINDSRVPIME-------LPTYTGSIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTHDLEMMPPDD  249 (465)
T ss_dssp             CTTSSEEEEEEEECTTSCEEE-------ECCCSSSSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCCCEECCCCCC
T ss_pred             CCCCCeEEEEEecccccceee-------cccccccccceeeeeeccccCCC----CCceeEEEEecCCCcEEEEEeccCc
Confidence            8888887765322 2222211       110     001111221111110    011247778887654322111    


Q ss_pred             -ccCCcCeEEEEEcCCCcEEEEEc-CC---CeEEEEECCCCC
Q psy16005        212 -LDHLGPVTDCSFSPSNEYLVASD-AH---RKVVLYRVPDFE  248 (248)
Q Consensus       212 -~~~~~~v~~~~~s~~~~~l~~~~-~d---~~i~vw~~~~~~  248 (248)
                       ......+..+.|+|+++.++... .+   ..+.++|..+++
T Consensus       250 ~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~  291 (465)
T d1xfda1         250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV  291 (465)
T ss_dssp             GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred             CccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCc
Confidence             11233578899999998666542 22   357788887764


No 63 
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=99.30  E-value=4.1e-10  Score=84.86  Aligned_cols=208  Identities=12%  Similarity=0.137  Sum_probs=121.6

Q ss_pred             CcEEEEEec--CCCcee--eee-ecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEe
Q psy16005         37 GNSVIIRNI--ENPAIS--DIY-TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS  111 (248)
Q Consensus        37 ~~~v~v~~~--~~~~~~--~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  111 (248)
                      ++.|+++.+  ++++..  ... ......+..++|+|+++.|+++.. +.+..|.+.....+..............++++
T Consensus        13 ~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~   91 (365)
T d1jofa_          13 PGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDAD   91 (365)
T ss_dssp             SCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTT
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEEC
Confidence            456655544  444432  111 123445677999999999988764 56777776643322212111223445667778


Q ss_pred             cCCCEEEEEe--CCc--EE------------EEEc---------------cCCCCCceeEeCCCCCEEEEEc-CCCeEEE
Q psy16005        112 PDNQRMISIV--ENG--AK------------VSSL---------------PIDYEPSSISLDHEHGLVAVGG-ADSKISI  159 (248)
Q Consensus       112 ~~~~~l~~~~--~~~--~~------------i~~~---------------~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~  159 (248)
                      ++++.++...  ...  +.            +..+               +....+..+.++|++++++++. ....|.+
T Consensus        92 ~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~  171 (365)
T d1jofa_          92 TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT  171 (365)
T ss_dssp             SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEE
Confidence            8887543322  111  11            1111               1122356899999999777765 3557888


Q ss_pred             EE---CCceee--e---ecccCCCceEEEcCCCCEEEEEc-CCCcEEEEEcCCCCCCCccc------------------c
Q psy16005        160 VE---NGAKVS--S---LPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKAE------------------L  212 (248)
Q Consensus       160 ~~---~~~~~~--~---~~~~~~~~~~~~s~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~------------------~  212 (248)
                      |+   .+....  .   ......+..++|+|+++++.+.. .+++|.+|++..++......                  .
T Consensus       172 ~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (365)
T d1jofa_         172 HRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETG  251 (365)
T ss_dssp             EEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTS
T ss_pred             EEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccc
Confidence            76   222211  1   12245678899999999886665 47889999997765321110                  0


Q ss_pred             cCCcCeEEEEEcCCCcEEEEEcC------CCeEEEEECC
Q psy16005        213 DHLGPVTDCSFSPSNEYLVASDA------HRKVVLYRVP  245 (248)
Q Consensus       213 ~~~~~v~~~~~s~~~~~l~~~~~------d~~i~vw~~~  245 (248)
                      .+......+.++|||++|+++..      .+.|..|++.
T Consensus       252 ~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~  290 (365)
T d1jofa_         252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR  290 (365)
T ss_dssp             SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred             cccCCccceEECCCCCEEEEEcccCCCccceEEEEEEec
Confidence            12234567899999999988732      2336666653


No 64 
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.22  E-value=8e-09  Score=73.89  Aligned_cols=184  Identities=10%  Similarity=0.105  Sum_probs=121.1

Q ss_pred             cceEEEEECcCCcEEEEE-ccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEE--------
Q psy16005         59 CAVNVAKYSPSGFYIASG-DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSS--------  129 (248)
Q Consensus        59 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~--------  129 (248)
                      ....+++++++|+..++. +..+.+..++....... .....+ ......++++++++.+++...++...+.        
T Consensus        14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~-~~~~~~-~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~   91 (260)
T d1rwia_          14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV   91 (260)
T ss_dssp             CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEE-ECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEE
T ss_pred             CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEE-EeccCC-ccCceEEEEcCCCCEEEeeeeeceeeeeeeccceee
Confidence            345899999999976654 45577777776554322 122222 2356789999999876655444432222        


Q ss_pred             --ccCCCCCceeEeCCCCCEEEEEcCCCeEEEEECCc-eeeeec--ccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCC
Q psy16005        130 --LPIDYEPSSISLDHEHGLVAVGGADSKISIVENGA-KVSSLP--IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNK  204 (248)
Q Consensus       130 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~--~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~  204 (248)
                        ......+..++++++++++++...+..+..++... ......  ....+..++++|+++.+++...++.|..+|....
T Consensus        92 ~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~  171 (260)
T d1rwia_          92 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN  171 (260)
T ss_dssp             CCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred             eeeeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccc
Confidence              11224567888999999888877777777777332 222222  2345789999999998888888888999998765


Q ss_pred             CCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECC
Q psy16005        205 SLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP  245 (248)
Q Consensus       205 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~  245 (248)
                      .... ...........+++.++|+++++....+.|..++..
T Consensus       172 ~~~~-~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~  211 (260)
T d1rwia_         172 NQVV-LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG  211 (260)
T ss_dssp             CEEE-CCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTT
T ss_pred             eeee-eeccccCCCccceeeeeeeeeeeecCCCEEEEEeCC
Confidence            4322 222344567899999999988888778888887654


No 65 
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=99.21  E-value=9e-09  Score=75.32  Aligned_cols=181  Identities=10%  Similarity=0.038  Sum_probs=121.4

Q ss_pred             ceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEcc-------
Q psy16005         60 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLP-------  131 (248)
Q Consensus        60 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~-------  131 (248)
                      .+..++++|||+++++...+++|..|+..... .   .+......+.+++|++||+.+++...++ +..++..       
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~-~---~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q---IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E---EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCE-E---EEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence            57889999999999999999999999866432 2   2333457799999999999888775443 3444432       


Q ss_pred             ------CCCCCceeEeCCCCCEEEEEcCCCeEEEEECCceeee-ec----------c--cCCCceEEEcCCCCEEEEEcC
Q psy16005        132 ------IDYEPSSISLDHEHGLVAVGGADSKISIVENGAKVSS-LP----------I--DYEPSSISLDHEHGLVAVGGA  192 (248)
Q Consensus       132 ------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~----------~--~~~~~~~~~s~~~~~l~~~~~  192 (248)
                            ....+..+.+.++++++++.+.++.+..++....... ..          .  ...+..+.++.+ .++++.+.
T Consensus       105 ~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~-~l~~~~~~  183 (302)
T d2p4oa1         105 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGN-FLYVSNTE  183 (302)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETT-EEEEEETT
T ss_pred             eccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCC-ceeeecCC
Confidence                  2334567888999999998888888888883322111 10          0  111244555432 34555667


Q ss_pred             CCcEEEEEcCCCCCCCccc-ccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECC
Q psy16005        193 DSKVHIYELNNKSLSPKAE-LDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP  245 (248)
Q Consensus       193 d~~v~i~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~  245 (248)
                      .+.|+.++........... .........++++++|.++++...++.|..++..
T Consensus       184 ~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~  237 (302)
T d2p4oa1         184 KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD  237 (302)
T ss_dssp             TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred             CCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCC
Confidence            8889999887654332211 1223456789999999988887778888888653


No 66 
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=99.13  E-value=2.5e-08  Score=73.26  Aligned_cols=184  Identities=12%  Similarity=0.145  Sum_probs=115.7

Q ss_pred             CCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeeecCC----cceEEEEECcCCcEEEEEcc--------------
Q psy16005         18 GQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHS----CAVNVAKYSPSGFYIASGDI--------------   78 (248)
Q Consensus        18 ~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~--------------   78 (248)
                      +....++|.++|+.++++. .+.+...+.+............    ...+.+++.++|++.++-..              
T Consensus        71 g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~  150 (314)
T d1pjxa_          71 GIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQE  150 (314)
T ss_dssp             CCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred             CcceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceecc
Confidence            3467899999998777765 5678888876543322111111    13577999999988776432              


Q ss_pred             -CCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCC----EEEEEeCCcEEE--EEccCC-----------------C
Q psy16005         79 -SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ----RMISIVENGAKV--SSLPID-----------------Y  134 (248)
Q Consensus        79 -dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~l~~~~~~~~~i--~~~~~~-----------------~  134 (248)
                       .|.|..++.. ++..   .+...-...+.++|+|++.    .|+++....-++  +++...                 .
T Consensus       151 ~~G~v~~~~~d-g~~~---~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~  226 (314)
T d1pjxa_         151 KFGSIYCFTTD-GQMI---QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG  226 (314)
T ss_dssp             SCEEEEEECTT-SCEE---EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred             CCceEEEEeec-Ccee---EeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccc
Confidence             2345444443 2221   1111123457899998764    566554433333  333211                 1


Q ss_pred             CCceeEeCCCCCEEEEEcCCCeEEEEE-C-Cceeeeeccc-CCCceEEEcCCCC-EEEEEcCCCcEEEEEcCCCC
Q psy16005        135 EPSSISLDHEHGLVAVGGADSKISIVE-N-GAKVSSLPID-YEPSSISLDHEHG-LVAVGGADSKVHIYELNNKS  205 (248)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~i~~~~-~-~~~~~~~~~~-~~~~~~~~s~~~~-~l~~~~~d~~v~i~d~~~~~  205 (248)
                      .+..+++..+|+++++....+.|..|+ . ++....+..+ ..+++++|.|+++ ++++.+.+|.|..+++...-
T Consensus       227 ~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G  301 (314)
T d1pjxa_         227 GADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG  301 (314)
T ss_dssp             EEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred             cceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCC
Confidence            244688899999988888889999999 3 3444555554 4578999999997 45566678888888876443


No 67 
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=99.12  E-value=1.5e-07  Score=69.16  Aligned_cols=185  Identities=11%  Similarity=0.142  Sum_probs=120.9

Q ss_pred             CcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCC---cEEEEEcc---
Q psy16005         58 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVEN---GAKVSSLP---  131 (248)
Q Consensus        58 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~~i~~~~---  131 (248)
                      ...+..++|.++|++.++-...+.|..|+..+++..  ............+++++||+.+++...+   ...+..+.   
T Consensus        39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~--~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~  116 (319)
T d2dg1a1          39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK--RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG  116 (319)
T ss_dssp             CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE--EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred             CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEE--EEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCC
Confidence            344578999999997777778899999998776533  2223345678899999999877765432   12233321   


Q ss_pred             -----------CCCCCceeEeCCCCCEEEEEcC------CCeEEEEE-CCceeeeec-ccCCCceEEEcCCCCEEEEE-c
Q psy16005        132 -----------IDYEPSSISLDHEHGLVAVGGA------DSKISIVE-NGAKVSSLP-IDYEPSSISLDHEHGLVAVG-G  191 (248)
Q Consensus       132 -----------~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~-~~~~~~~~~-~~~~~~~~~~s~~~~~l~~~-~  191 (248)
                                 ....+..+.+.++|+++++...      .+.+..++ .+..+..+. .-..++.++|+|+++.|+++ +
T Consensus       117 ~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~  196 (319)
T d2dg1a1         117 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET  196 (319)
T ss_dssp             CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred             ceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecc
Confidence                       1223456788999987776432      23355555 343333332 23346889999999866554 5


Q ss_pred             CCCcEEEEEcCCCCCCCcc-------cccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEEC
Q psy16005        192 ADSKVHIYELNNKSLSPKA-------ELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  244 (248)
Q Consensus       192 ~d~~v~i~d~~~~~~~~~~-------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~  244 (248)
                      ..+.|+.|++.........       ..........+++.++|++.++....+.|.+|+-
T Consensus       197 ~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p  256 (319)
T d2dg1a1         197 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK  256 (319)
T ss_dssp             GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC
Confidence            6789999998754321110       0111233578999999998888888899999984


No 68 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07  E-value=7.3e-08  Score=74.62  Aligned_cols=230  Identities=12%  Similarity=0.141  Sum_probs=126.6

Q ss_pred             CCcEEEEeCCCCCEEEEeCCcEEEEEecCCCceeeeeec-CCcce-----------------EEEEECcCCcEEEEEccC
Q psy16005         18 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTE-HSCAV-----------------NVAKYSPSGFYIASGDIS   79 (248)
Q Consensus        18 ~~v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~~~~~-~~~~v-----------------~~~~~s~~~~~l~~~~~d   79 (248)
                      +.+....|||||+.+|...++.|++.+..+++..+.... ..+.|                 .++.|||||++||....|
T Consensus       114 ~~l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D  193 (465)
T d1xfda1         114 AKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN  193 (465)
T ss_dssp             CCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred             cccceeeeccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEec
Confidence            445568899999999999999999999887766554432 11111                 478899999999986422


Q ss_pred             -C---------------------------------eEEEEECCCCceeeeee----ccCCCCCeeEEEEecCCCEEEEEe
Q psy16005         80 -G---------------------------------KVRIWDTVNKEHILKNE----FHPIGGPIKDIAWSPDNQRMISIV  121 (248)
Q Consensus        80 -g---------------------------------~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~  121 (248)
                       .                                 .+.++|+.++.......    .......+..+.|+++++.++...
T Consensus       194 ~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~  273 (465)
T d1xfda1         194 DSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWL  273 (465)
T ss_dssp             CTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEE
T ss_pred             ccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEE
Confidence             1                                 24455554443211110    111122467789999988666554


Q ss_pred             CCc-----EEEEEccCC-----------C----CCceeEeCCCCCEEE---EEcCCC--eEEEEE--------CCceeee
Q psy16005        122 ENG-----AKVSSLPID-----------Y----EPSSISLDHEHGLVA---VGGADS--KISIVE--------NGAKVSS  168 (248)
Q Consensus       122 ~~~-----~~i~~~~~~-----------~----~~~~~~~~~~~~~~~---~~~~~~--~i~~~~--------~~~~~~~  168 (248)
                      ...     +.+++...+           .    ......++++|+.++   ....+|  .++.+.        .+.....
T Consensus       274 nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~  353 (465)
T d1xfda1         274 NRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQS  353 (465)
T ss_dssp             ETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCB
T ss_pred             ccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEE
Confidence            321     233333211           1    123456788887432   222222  344332        1222223


Q ss_pred             ec-ccCCCceE-EEcCCCCEEE-EEcCCC--cEEEEE--cCCCCCCCc--ccccCCcCeEEEEEcCCCcEEEEEcCC---
Q psy16005        169 LP-IDYEPSSI-SLDHEHGLVA-VGGADS--KVHIYE--LNNKSLSPK--AELDHLGPVTDCSFSPSNEYLVASDAH---  236 (248)
Q Consensus       169 ~~-~~~~~~~~-~~s~~~~~l~-~~~~d~--~v~i~d--~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~d---  236 (248)
                      +. ....|..+ .++++++.+. ++..++  .-++|.  +........  ..........++.|||++++++.....   
T Consensus       354 LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~  433 (465)
T d1xfda1         354 ITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGV  433 (465)
T ss_dssp             SCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSS
T ss_pred             eccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCC
Confidence            32 34455554 6888877554 444432  334444  443322211  112344567899999999998855432   


Q ss_pred             CeEEEEECCCC
Q psy16005        237 RKVVLYRVPDF  247 (248)
Q Consensus       237 ~~i~vw~~~~~  247 (248)
                      -.+.+++..++
T Consensus       434 P~~~~~~~~~~  444 (465)
T d1xfda1         434 PMVTVHNTTDK  444 (465)
T ss_dssp             CCEEEEETTTC
T ss_pred             CeEEEEECCCC
Confidence            45666666554


No 69 
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.04  E-value=3.2e-07  Score=66.08  Aligned_cols=183  Identities=13%  Similarity=0.098  Sum_probs=120.0

Q ss_pred             cEEEEeCCCC-CEEEEeC--CcEEEEEecCCCceeeeee-cCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeee
Q psy16005         20 PIVLGGDPKG-KNFLYTN--GNSVIIRNIENPAISDIYT-EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK   95 (248)
Q Consensus        20 v~~~~~s~~~-~~l~~~~--~~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~   95 (248)
                      ...+++.++. ..++...  ++.|..++. .++....+. ........+++.++++++++....+.+.+++... +.+..
T Consensus        72 p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g-~~~~~  149 (279)
T d1q7fa_          72 PNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHK  149 (279)
T ss_dssp             EEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEE
T ss_pred             cccccccccccccceeccCCccccccccc-cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCC-ceeec
Confidence            3445544443 3344332  456767764 455554443 3345578899999999888888888898888653 43333


Q ss_pred             eeccCCCCCeeEEEEecCCCEEEEEeCCc-EEEEEcc-----------CCCCCceeEeCCCCCEEEEEcC-CCeEEEEE-
Q psy16005         96 NEFHPIGGPIKDIAWSPDNQRMISIVENG-AKVSSLP-----------IDYEPSSISLDHEHGLVAVGGA-DSKISIVE-  161 (248)
Q Consensus        96 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~-  161 (248)
                      .....+......+++.++++.+++....+ +.+++..           ....+..++++++++++++-.. ++.|.+++ 
T Consensus       150 ~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~  229 (279)
T d1q7fa_         150 FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ  229 (279)
T ss_dssp             EECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred             ccccccccccceeeeccceeEEeeeccccceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC
Confidence            33344566788899999887666554332 3444432           1234678899999998877554 45799998 


Q ss_pred             CCceeeeeccc---CCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCC
Q psy16005        162 NGAKVSSLPID---YEPSSISLDHEHGLVAVGGADSKVHIYELNNKS  205 (248)
Q Consensus       162 ~~~~~~~~~~~---~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~  205 (248)
                      .++.+..+...   ..+..+++.|+|.++ +++.++.|++|......
T Consensus       230 ~G~~~~~~~~~~~~~~p~~vav~~dG~l~-V~~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         230 DGQLISALESKVKHAQCFDVALMDDGSVV-LASKDYRLYIYRYVQLA  275 (279)
T ss_dssp             TSCEEEEEEESSCCSCEEEEEEETTTEEE-EEETTTEEEEEECSCCC
T ss_pred             CCCEEEEEeCCCCCCCEeEEEEeCCCcEE-EEeCCCeEEEEEeeeec
Confidence            67766665432   347889999999755 45678899999987654


No 70 
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.01  E-value=1e-06  Score=63.89  Aligned_cols=206  Identities=13%  Similarity=0.068  Sum_probs=134.8

Q ss_pred             EEEeCCCCCEEEEeC--CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeecc
Q psy16005         22 VLGGDPKGKNFLYTN--GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFH   99 (248)
Q Consensus        22 ~~~~s~~~~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~   99 (248)
                      +..|++....|....  .+.|..||..+++.. .+ .....+.++++.++++++++. .+ .+..+|..+++........
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~-~~~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~~~l~~~~   97 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKT-VH-ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELE   97 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EE-ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSS
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EE-ECCCCcEEEEEecCCCEEEEE-eC-ccEEeecccceeeEEeeee
Confidence            566888666666664  789999998887653 23 335678899999998877654 44 5889999988753222222


Q ss_pred             C--CCCCeeEEEEecCCCEEEEEeCC-----cEEEEEccCC---------CCCceeEeCCCCCEE-EEEcCCCeEEEEEC
Q psy16005        100 P--IGGPIKDIAWSPDNQRMISIVEN-----GAKVSSLPID---------YEPSSISLDHEHGLV-AVGGADSKISIVEN  162 (248)
Q Consensus       100 ~--~~~~v~~~~~~~~~~~l~~~~~~-----~~~i~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~  162 (248)
                      .  ....+..+.+.|+|+..++....     ...+|.+...         ..+..+.++++++.+ ++.+..+.|..++.
T Consensus        98 ~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~  177 (295)
T d2ghsa1          98 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPL  177 (295)
T ss_dssp             TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred             cCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEeee
Confidence            1  12357889999999877765422     2244444321         235678899998854 45566788888761


Q ss_pred             ----C----ceeeeec---ccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEc-CCCcEE
Q psy16005        163 ----G----AKVSSLP---IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFS-PSNEYL  230 (248)
Q Consensus       163 ----~----~~~~~~~---~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l  230 (248)
                          +    +......   ....+..++++.+|.+.++.-..+.|..||.. ++.+.....+ ...+++++|- ||.+.|
T Consensus       178 d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~-G~~~~~i~lP-~~~~T~~~FGG~d~~~L  255 (295)
T d2ghsa1         178 DARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYEVP-GKQTTCPAFIGPDASRL  255 (295)
T ss_dssp             CTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEECS-CSBEEEEEEESTTSCEE
T ss_pred             cccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC-CcEeeEecCC-CCceEEEEEeCCCCCEE
Confidence                1    1111111   23346788999999977776677889999964 5555555433 3468999996 676666


Q ss_pred             EEE
Q psy16005        231 VAS  233 (248)
Q Consensus       231 ~~~  233 (248)
                      +..
T Consensus       256 yvT  258 (295)
T d2ghsa1         256 LVT  258 (295)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            543


No 71 
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.75  E-value=6e-06  Score=59.70  Aligned_cols=178  Identities=10%  Similarity=0.019  Sum_probs=115.4

Q ss_pred             EEEEECcC-CcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccCC-------
Q psy16005         62 NVAKYSPS-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPID-------  133 (248)
Q Consensus        62 ~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~-------  133 (248)
                      .+..|++. +++..+=-..+.|.-||..+++.. ...+   ...+.++++.++|.++++ +.+++..++....       
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~~---~~~~~~i~~~~dg~l~va-~~~gl~~~d~~tg~~~~l~~   95 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL---PFMGSALAKISDSKQLIA-SDDGLFLRDTATGVLTLHAE   95 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC---SSCEEEEEEEETTEEEEE-ETTEEEEEETTTCCEEEEEC
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEEC---CCCcEEEEEecCCCEEEE-EeCccEEeecccceeeEEee
Confidence            45678874 455455456789999999888642 2222   457889999999876665 5677777765422       


Q ss_pred             -------CCCceeEeCCCCCEEEEEcC------CCeEEEEECCceeeeecccCCCceEEEcCCCCEEEEE-cCCCcEEEE
Q psy16005        134 -------YEPSSISLDHEHGLVAVGGA------DSKISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG-GADSKVHIY  199 (248)
Q Consensus       134 -------~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~d~~v~i~  199 (248)
                             ..+..+.+.|+|++.++...      .+.++..+.++.......-..++.++++++++.+..+ +..+.|+.|
T Consensus        96 ~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~  175 (295)
T d2ghsa1          96 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRV  175 (295)
T ss_dssp             SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred             eecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEe
Confidence                   12456778889987776432      2234334455544444444456889999999866544 567889999


Q ss_pred             EcCCCCCC--C--cc---cccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEEC
Q psy16005        200 ELNNKSLS--P--KA---ELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  244 (248)
Q Consensus       200 d~~~~~~~--~--~~---~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~  244 (248)
                      ++......  .  ..   ..+..+....+++..+|.+.++.-..+.|..||-
T Consensus       176 ~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp  227 (295)
T d2ghsa1         176 PLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT  227 (295)
T ss_dssp             EBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred             eecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC
Confidence            87543211  1  11   1123455788999999997777666778888884


No 72 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=98.63  E-value=5.3e-06  Score=59.10  Aligned_cols=184  Identities=16%  Similarity=0.142  Sum_probs=100.7

Q ss_pred             ccCCcEEEEeCCCCCEEEEeC--C-----cEEEEEecCCCceeeeee------cCCcceEEEEECcCCcEEEEEccC---
Q psy16005         16 QRGQPIVLGGDPKGKNFLYTN--G-----NSVIIRNIENPAISDIYT------EHSCAVNVAKYSPSGFYIASGDIS---   79 (248)
Q Consensus        16 ~~~~v~~~~~s~~~~~l~~~~--~-----~~v~v~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d---   79 (248)
                      +.+.+...+|||||+.||...  +     ..|.+++..+++..+...      ..........|+|+|+.|+.....   
T Consensus        39 ~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  118 (281)
T d1k32a2          39 NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPF  118 (281)
T ss_dssp             SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSS
T ss_pred             CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCC
Confidence            345677899999999998763  1     258888888777654321      112345678899999998875332   


Q ss_pred             ---CeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeC-C------------cEEEEEc---------cCCC
Q psy16005         80 ---GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVE-N------------GAKVSSL---------PIDY  134 (248)
Q Consensus        80 ---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~------------~~~i~~~---------~~~~  134 (248)
                         ..+...+...+...  ..   +...... .+.+++..++.... .            .......         ....
T Consensus       119 ~~~~~~~~~~~~~~~~~--~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (281)
T d1k32a2         119 SSMTCLYRVENDGINFV--PL---NLGPATH-ILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMST  192 (281)
T ss_dssp             TTCCEEEEEEGGGTEEE--EC---CSCSCSE-EEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSS
T ss_pred             ccceeeeeecCCCceeE--Ee---cCCccce-eeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeeccCCcc
Confidence               23555555544421  11   1222223 34455544444321 1            1111111         1112


Q ss_pred             CCceeEeCCCCCEEEEEcCC--CeEEEEE-CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCC
Q psy16005        135 EPSSISLDHEHGLVAVGGAD--SKISIVE-NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLS  207 (248)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~--~~i~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~  207 (248)
                      ......+.++. .+.....+  ..|.++| .+.....+..........|+|||+.|+... ++.|+++|+.+++..
T Consensus       193 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~~lt~~~~~~~~~~SpDG~~I~f~~-~~~l~~~d~~~g~~~  266 (281)
T d1k32a2         193 HVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKIE  266 (281)
T ss_dssp             CCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE-TTEEEEECTTTCCEE
T ss_pred             ccceeeeeccc-cceecccccccceEEEeCCCCceEEeecCCCcccccCcCCCCEEEEEe-CCEEEEEECCCCCEE
Confidence            22223333332 22223332  3466667 444444444333344457999999877644 678999999888753


No 73 
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.58  E-value=9.5e-06  Score=60.51  Aligned_cols=212  Identities=10%  Similarity=0.074  Sum_probs=132.5

Q ss_pred             EEEeCC---CCCEEEEeC--CcEEEEEecCCCceeeeeec-CCcceEEEEECc--CCcEEEEEccC--------------
Q psy16005         22 VLGGDP---KGKNFLYTN--GNSVIIRNIENPAISDIYTE-HSCAVNVAKYSP--SGFYIASGDIS--------------   79 (248)
Q Consensus        22 ~~~~s~---~~~~l~~~~--~~~v~v~~~~~~~~~~~~~~-~~~~v~~~~~s~--~~~~l~~~~~d--------------   79 (248)
                      .+++..   ||++++...  ++.|.+.|+++.+..+.+.. ....+..++..+  +-.+++.++.+              
T Consensus        89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~  168 (459)
T d1fwxa2          89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV  168 (459)
T ss_dssp             EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred             cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccch
Confidence            455554   899999985  78999999999887665542 234567777655  44566665542              


Q ss_pred             ----CeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCc---E-------------EEEEccCCCCCcee
Q psy16005         80 ----GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENG---A-------------KVSSLPIDYEPSSI  139 (248)
Q Consensus        80 ----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~-------------~i~~~~~~~~~~~~  139 (248)
                          +.+.+.|..+.+........   .....+.+++||+++++.+.+.   .             .+++++..     .
T Consensus       169 ~~y~~~~t~ID~~tm~V~~QV~V~---g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~ri-----e  240 (459)
T d1fwxa2         169 ANYVNVFTAVDADKWEVAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI-----E  240 (459)
T ss_dssp             G-EEEEEEEEETTTTEEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH-----H
T ss_pred             hhcceEEEEEecCCceEEEEeeeC---CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHh-----H
Confidence                23677888887765544443   3566789999999999887432   1             11221100     0


Q ss_pred             EeCCCCCEEEEEcCCCeEEEEECC-----ceeeeecccCCCceEEEcCCCCEEEEEc-CCCcEEEEEcCCCCC-------
Q psy16005        140 SLDHEHGLVAVGGADSKISIVENG-----AKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSL-------  206 (248)
Q Consensus       140 ~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~s~~~~~l~~~~-~d~~v~i~d~~~~~~-------  206 (248)
                      .+.++|+.--.    +.+.+.|..     ..+..++....+..+.++|||+++++++ .+.++.++|++.-..       
T Consensus       241 ~av~~Gk~~ei----ngV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~  316 (459)
T d1fwxa2         241 KAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD  316 (459)
T ss_dssp             HHHHHTCSEEE----TTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-
T ss_pred             HhhhcCCcEEe----CCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCC
Confidence            00111211111    234555622     3445677788899999999999888776 478999999964211       


Q ss_pred             CCc---ccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECC
Q psy16005        207 SPK---AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP  245 (248)
Q Consensus       207 ~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~  245 (248)
                      ...   ......-....-+|...|.-..+---|..|.-|++.
T Consensus       317 ~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~  358 (459)
T d1fwxa2         317 PRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred             ccccEEeecccCcCccccccCCCceEEEEeeccceEEEEecc
Confidence            000   111123345667898888655555678999999974


No 74 
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.57  E-value=3.4e-05  Score=54.64  Aligned_cols=204  Identities=10%  Similarity=-0.011  Sum_probs=127.2

Q ss_pred             CCcEEEEeCCCCCEEEEeC--CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEE-EEccCCeEEEEECCCCceee
Q psy16005         18 GQPIVLGGDPKGKNFLYTN--GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA-SGDISGKVRIWDTVNKEHIL   94 (248)
Q Consensus        18 ~~v~~~~~s~~~~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~   94 (248)
                      ..+.+++|.+.++.++.+.  ++.|+..+++.......+......+.++++..-++.|+ +-...+.|.+.++...... 
T Consensus        36 ~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~-  114 (263)
T d1npea_          36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-  114 (263)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-
T ss_pred             CcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEE-
Confidence            3477899999888888774  78899988876665554544345688899987555555 5556789999998866532 


Q ss_pred             eeeccCCCCCeeEEEEecCCCEEEEEeCC--cEEEEEccCC------------CCCceeEeCCCCCEEE-EEcCCCeEEE
Q psy16005         95 KNEFHPIGGPIKDIAWSPDNQRMISIVEN--GAKVSSLPID------------YEPSSISLDHEHGLVA-VGGADSKISI  159 (248)
Q Consensus        95 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~i~~~~~~------------~~~~~~~~~~~~~~~~-~~~~~~~i~~  159 (248)
                       ......-..+..++++|...+++....+  ..+++....+            ..+..+++++.++.|. +-...+.|..
T Consensus       115 -~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~  193 (263)
T d1npea_         115 -VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC  193 (263)
T ss_dssp             -EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             -EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEE
Confidence             2222223568899999988777766433  2345543322            2346778877766554 4456778888


Q ss_pred             EE-CCceeeee-cccCCCceEEEcCCCCEEEEE-cCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcC
Q psy16005        160 VE-NGAKVSSL-PIDYEPSSISLDHEHGLVAVG-GADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP  225 (248)
Q Consensus       160 ~~-~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~  225 (248)
                      .+ .+.....+ .....+..+++.  +..|... ...+.|...|..+++...............++..+
T Consensus       194 ~~~~g~~~~~v~~~~~~P~~lav~--~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         194 LNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             EETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             EECCCCCeEEEECCCCCcEEEEEE--CCEEEEEECCCCEEEEEECCCCccceEECCCCCCCcceEEEeC
Confidence            77 33333322 222335667765  4445444 45678988998887765444323333444555444


No 75 
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=98.25  E-value=0.00041  Score=52.61  Aligned_cols=228  Identities=8%  Similarity=-0.012  Sum_probs=121.2

Q ss_pred             CcEEEEeCCCCCEEEEeC--C----cEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccC-------------
Q psy16005         19 QPIVLGGDPKGKNFLYTN--G----NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS-------------   79 (248)
Q Consensus        19 ~v~~~~~s~~~~~l~~~~--~----~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------------   79 (248)
                      .+..+++|||+++++.+-  +    -.++++|+.+++.+...-. ......++|++|++.|+....+             
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~  204 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST  204 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc-cccccceEEcCCCCEEEEEEeccccCccccccccc
Confidence            345678899999999862  2    3899999999987642211 1122568899999877654322             


Q ss_pred             ---CeEEEEECCCCceeeeeeccCC--CCCeeEEEEecCCCEEEEEeCC----cEEEEEccCCCCC---------ceeE-
Q psy16005         80 ---GKVRIWDTVNKEHILKNEFHPI--GGPIKDIAWSPDNQRMISIVEN----GAKVSSLPIDYEP---------SSIS-  140 (248)
Q Consensus        80 ---g~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~----~~~i~~~~~~~~~---------~~~~-  140 (248)
                         ..|..+.+.+........+...  ...+..+..++++++++.....    ...+|.++.....         ..+. 
T Consensus       205 ~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  284 (430)
T d1qfma1         205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID  284 (430)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred             CCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeec
Confidence               2588888877654322333332  2345667789999998765422    2355554322110         0111 


Q ss_pred             --------eCCCCC-EEEEEc---CCCeEEEEECCce-----eeeecc-cCCCceEEEcCCCCEEEEEc-CCC--cEEEE
Q psy16005        141 --------LDHEHG-LVAVGG---ADSKISIVENGAK-----VSSLPI-DYEPSSISLDHEHGLVAVGG-ADS--KVHIY  199 (248)
Q Consensus       141 --------~~~~~~-~~~~~~---~~~~i~~~~~~~~-----~~~~~~-~~~~~~~~~s~~~~~l~~~~-~d~--~v~i~  199 (248)
                              ....+. +++...   .++.|...+....     ...++. ...+..-.++..+.+|+... .++  .|+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~  364 (430)
T d1qfma1         285 NFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLH  364 (430)
T ss_dssp             SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEE
T ss_pred             ccccceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEE
Confidence                    011111 222221   1234444431111     111221 12222223334445565543 443  58899


Q ss_pred             EcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEE--c--CCCeEEEEECCCCC
Q psy16005        200 ELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS--D--AHRKVVLYRVPDFE  248 (248)
Q Consensus       200 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~--~d~~i~vw~~~~~~  248 (248)
                      +..+++...... ...+.+..+...++...+...  +  .=.++.-+|+.+++
T Consensus       365 ~~~~~~~~~~~~-~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         365 DLATGALLKIFP-LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             ETTTCCEEEEEC-CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             ECCCCcEEEecC-CCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            998877643333 334556666656665544332  2  23788889988764


No 76 
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=98.24  E-value=0.00039  Score=51.69  Aligned_cols=104  Identities=12%  Similarity=0.089  Sum_probs=67.0

Q ss_pred             CCcEEEEeCCCCCEEEEeC-C-----c------EEEEEecCCCceeeee---ecCCcceEEEEECcCCcEEEEEccC-Ce
Q psy16005         18 GQPIVLGGDPKGKNFLYTN-G-----N------SVIIRNIENPAISDIY---TEHSCAVNVAKYSPSGFYIASGDIS-GK   81 (248)
Q Consensus        18 ~~v~~~~~s~~~~~l~~~~-~-----~------~v~v~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d-g~   81 (248)
                      .++.......+|+.++.|+ +     +      .+.+||..+++-....   ..+.....+.++.+++++++.|+.+ ..
T Consensus        20 ~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~   99 (387)
T d1k3ia3          20 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKK   99 (387)
T ss_dssp             CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTC
T ss_pred             cccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcc
Confidence            3445555667888888764 1     1      4779999887643321   1233334566788999999988655 58


Q ss_pred             EEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeC
Q psy16005         82 VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVE  122 (248)
Q Consensus        82 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  122 (248)
                      +.+||..+........+.. ...-...+..+||+.++.++.
T Consensus       100 ~~~yd~~~~~w~~~~~~~~-~r~~~~~~~~~dG~v~v~GG~  139 (387)
T d1k3ia3         100 TSLYDSSSDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGS  139 (387)
T ss_dssp             EEEEEGGGTEEEECCCCSS-CCSSCEEEECTTSCEEEECCC
T ss_pred             eeEecCccCcccccccccc-cccccceeeecCCceeeeccc
Confidence            9999998876543222222 222345677788888888764


No 77 
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.19  E-value=0.00035  Score=49.28  Aligned_cols=213  Identities=9%  Similarity=-0.018  Sum_probs=128.4

Q ss_pred             CCEEEEeCCcEEEEEecCCCcee-----eeeecCCcceEEEEECcCCcEEEEE-ccCCeEEEEECCCCceeeeeeccCCC
Q psy16005         29 GKNFLYTNGNSVIIRNIENPAIS-----DIYTEHSCAVNVAKYSPSGFYIASG-DISGKVRIWDTVNKEHILKNEFHPIG  102 (248)
Q Consensus        29 ~~~l~~~~~~~v~v~~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~  102 (248)
                      |.+|+.+..+.|+-.+++.....     ..+..+...+.+++|.+..+.|+.. ..++.|+..++......  ..+....
T Consensus         1 ~~fLl~s~~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~--~v~~~~~   78 (263)
T d1npea_           1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQDL   78 (263)
T ss_dssp             CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTTC
T ss_pred             CCEEEEeCCCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcE--EEEEecc
Confidence            46788888888888887654322     2233444567889999876666654 56688998888766532  2222223


Q ss_pred             CCeeEEEEecCCCEEEEEeCCc--EEEEEccC----------CCCCceeEeCCCCCEEEEEcC---CCeEEEEE-CCcee
Q psy16005        103 GPIKDIAWSPDNQRMISIVENG--AKVSSLPI----------DYEPSSISLDHEHGLVAVGGA---DSKISIVE-NGAKV  166 (248)
Q Consensus       103 ~~v~~~~~~~~~~~l~~~~~~~--~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~-~~~~~  166 (248)
                      ..+.+++++.-+..|+.+....  +.+.+++.          ...+..++++|...++.....   ...|.-.+ .+...
T Consensus        79 ~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~  158 (263)
T d1npea_          79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (263)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence            5688999988777777765433  34444332          134567778776665554322   22343334 33333


Q ss_pred             eeec--ccCCCceEEEcCCCCEEEEE-cCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEE-cCCCeEEEE
Q psy16005        167 SSLP--IDYEPSSISLDHEHGLVAVG-GADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS-DAHRKVVLY  242 (248)
Q Consensus       167 ~~~~--~~~~~~~~~~s~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~vw  242 (248)
                      ..+.  .-..+..+++++.++.|..+ ...+.|...++......... .+. ....++++.  +.+|+.. ...+.|...
T Consensus       159 ~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~-~~~-~~P~~lav~--~~~lYwtd~~~~~I~~~  234 (263)
T d1npea_         159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL-EGL-QYPFAVTSY--GKNLYYTDWKTNSVIAM  234 (263)
T ss_dssp             EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE-ECC-CSEEEEEEE--TTEEEEEETTTTEEEEE
T ss_pred             eeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEE-CCC-CCcEEEEEE--CCEEEEEECCCCEEEEE
Confidence            3332  22346789999887777655 45678999998765442222 222 234677775  4455544 456888888


Q ss_pred             ECCCC
Q psy16005        243 RVPDF  247 (248)
Q Consensus       243 ~~~~~  247 (248)
                      |..++
T Consensus       235 ~~~~g  239 (263)
T d1npea_         235 DLAIS  239 (263)
T ss_dssp             ETTTT
T ss_pred             ECCCC
Confidence            87665


No 78 
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.08  E-value=0.00064  Score=47.96  Aligned_cols=214  Identities=13%  Similarity=0.009  Sum_probs=126.7

Q ss_pred             EEEEeCCcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEc-cCCeEEEEECCCCce--eeeeeccCCCCCeeE
Q psy16005         31 NFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD-ISGKVRIWDTVNKEH--ILKNEFHPIGGPIKD  107 (248)
Q Consensus        31 ~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~  107 (248)
                      +|+.+....|+..++++.+....+. ....+.+++|++..+.|+-.. ..+.|.-.++.....  ............+..
T Consensus         3 fLl~s~~~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~g   81 (266)
T d1ijqa1           3 YLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (266)
T ss_dssp             EEEEECBSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             EEEEECCCeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcce
Confidence            5777777778889998766555443 445678999998777666554 566777776653221  111222222356778


Q ss_pred             EEEecCCCEEEEEeCCc--EEEEEccC----------CCCCceeEeCCCCCEEEEEc--CCCeEEEEE-CCceeeeec--
Q psy16005        108 IAWSPDNQRMISIVENG--AKVSSLPI----------DYEPSSISLDHEHGLVAVGG--ADSKISIVE-NGAKVSSLP--  170 (248)
Q Consensus       108 ~~~~~~~~~l~~~~~~~--~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~-~~~~~~~~~--  170 (248)
                      +++++.+..|+.+....  +.+.++..          ...+..++++|...++....  ..+.|.-.+ .+.....+.  
T Consensus        82 lAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~  161 (266)
T d1ijqa1          82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE  161 (266)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred             EEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccccc
Confidence            99988787777765443  34444432          23466778877655544433  334555555 444333332  


Q ss_pred             ccCCCceEEEcCCCCEEEEE-cCCCcEEEEEcCCCCCCCcccc-cCCcCeEEEEEcCCCcEEEEE-cCCCeEEEEECCCC
Q psy16005        171 IDYEPSSISLDHEHGLVAVG-GADSKVHIYELNNKSLSPKAEL-DHLGPVTDCSFSPSNEYLVAS-DAHRKVVLYRVPDF  247 (248)
Q Consensus       171 ~~~~~~~~~~s~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~-~~d~~i~vw~~~~~  247 (248)
                      .-..++.+++++.++.|..+ ...+.|...++........... .......++++.  +.+|+.+ ..++.|...+..++
T Consensus       162 ~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTC
T ss_pred             ccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCeEEEEECCCC
Confidence            22456889999987766665 5567899999876543222211 122345677776  3445444 46678887776665


No 79 
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.03  E-value=0.00092  Score=49.81  Aligned_cols=151  Identities=11%  Similarity=0.097  Sum_probs=97.9

Q ss_pred             EEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCC---------------eEEE-------------------
Q psy16005         39 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG---------------KVRI-------------------   84 (248)
Q Consensus        39 ~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---------------~i~i-------------------   84 (248)
                      .+.++|.++++...++.- ......++++++|+++++.+.+.               .+.+                   
T Consensus       174 ~~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~ein  252 (459)
T d1fwxa2         174 VFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN  252 (459)
T ss_dssp             EEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred             EEEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeC
Confidence            456789888887766643 34566889999999998876431               1333                   


Q ss_pred             ----EECCCCce-eeeeeccCCCCCeeEEEEecCCCEEEEEeC--CcEEEEEcc---------------------CCCCC
Q psy16005         85 ----WDTVNKEH-ILKNEFHPIGGPIKDIAWSPDNQRMISIVE--NGAKVSSLP---------------------IDYEP  136 (248)
Q Consensus        85 ----wd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~~i~~~~---------------------~~~~~  136 (248)
                          -|.+.... .....++. ......+..+|||+++++++.  ..+.+.++.                     ....+
T Consensus       253 gV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgP  331 (459)
T d1fwxa2         253 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP  331 (459)
T ss_dssp             TEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCE
T ss_pred             CceeecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCc
Confidence                33332110 01111111 234567899999999999984  446777763                     23345


Q ss_pred             ceeEeCCCCCEEEEEcCCCeEEEEECC------------ceeeeecccCCCceEE------EcCCCCEEEEEc
Q psy16005        137 SSISLDHEHGLVAVGGADSKISIVENG------------AKVSSLPIDYEPSSIS------LDHEHGLVAVGG  191 (248)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~~~~~~~~------~s~~~~~l~~~~  191 (248)
                      ...+|+..|+...+-.-|..|.-|+..            ..+..+..++.+..+.      ..|+|++|++.+
T Consensus       332 Lht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~n  404 (459)
T d1fwxa2         332 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS  404 (459)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred             cccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCCCCEEEEec
Confidence            567888888777777889999999832            3345566666665553      368999999876


No 80 
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=98.01  E-value=0.0018  Score=50.84  Aligned_cols=194  Identities=10%  Similarity=0.070  Sum_probs=103.7

Q ss_pred             cEEEEEecCCCceeeeeecCCcc---------eEEEEECcCCc---EEEEEccCCeEEEEECCCCceeeeeeccCCCC--
Q psy16005         38 NSVIIRNIENPAISDIYTEHSCA---------VNVAKYSPSGF---YIASGDISGKVRIWDTVNKEHILKNEFHPIGG--  103 (248)
Q Consensus        38 ~~v~v~~~~~~~~~~~~~~~~~~---------v~~~~~s~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--  103 (248)
                      ..+.-.|.++++..-.++.....         ........+++   .++.++.+|.+.++|.++++.+..........  
T Consensus       272 ~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~  351 (571)
T d2ad6a1         272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF  351 (571)
T ss_dssp             TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred             cceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccccc
Confidence            36777899999887666532211         11122222443   46788899999999999988653222111000  


Q ss_pred             ---------------------------------C--eeEEEEecCCCEEEEEeCCcEEEEEccC-CCCC------ceeEe
Q psy16005        104 ---------------------------------P--IKDIAWSPDNQRMISIVENGAKVSSLPI-DYEP------SSISL  141 (248)
Q Consensus       104 ---------------------------------~--v~~~~~~~~~~~l~~~~~~~~~i~~~~~-~~~~------~~~~~  141 (248)
                                                       .  =...+++|+...++....+....|.... ....      .....
T Consensus       352 ~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (571)
T d2ad6a1         352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM  431 (571)
T ss_dssp             EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred             ccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceee
Confidence                                             0  0125667777777666555443333211 1000      00000


Q ss_pred             CCCCCEEEEEcCCCeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeE
Q psy16005        142 DHEHGLVAVGGADSKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVT  219 (248)
Q Consensus       142 ~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~  219 (248)
                      .+.... ......|.|.-+|  +++.+.+.+......+-.++-.+.++++|+.||.++-+|.++++.+-+...+....-.
T Consensus       432 ~~~~~~-~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~  510 (571)
T d2ad6a1         432 YPGPNG-PTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGS  510 (571)
T ss_dssp             EECTTS-TTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred             ccccCC-cccCCcccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceec
Confidence            000000 0011234666777  6666666655544433223334567788999999999999999987655544322222


Q ss_pred             EEEEcCCCc-EEEE
Q psy16005        220 DCSFSPSNE-YLVA  232 (248)
Q Consensus       220 ~~~~s~~~~-~l~~  232 (248)
                      -+.|..||+ |+++
T Consensus       511 P~ty~~dGkqYi~v  524 (571)
T d2ad6a1         511 PMTYSFKGKQYIGS  524 (571)
T ss_dssp             CEEEEETTEEEEEE
T ss_pred             ceEEEECCEEEEEE
Confidence            255666886 5544


No 81 
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=98.00  E-value=0.00044  Score=54.45  Aligned_cols=67  Identities=12%  Similarity=0.126  Sum_probs=39.4

Q ss_pred             CCEEEEeCCcEEEEEecCCCceeeeeecCC----cceEEEEECcCCcEEEEEc------cCCeEEEEECCCCceeeee
Q psy16005         29 GKNFLYTNGNSVIIRNIENPAISDIYTEHS----CAVNVAKYSPSGFYIASGD------ISGKVRIWDTVNKEHILKN   96 (248)
Q Consensus        29 ~~~l~~~~~~~v~v~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~   96 (248)
                      ++.++...++.+.-.|.++++.........    ..++..-.-.++. ++.+.      .+|.|+-+|+++++.+.+.
T Consensus       116 ~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~-vivg~~~~~~~~~G~v~a~D~~TG~~~W~~  192 (571)
T d2ad6a1         116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDT-VLMGCSGAELGVRGAVNAFDLKTGELKWRA  192 (571)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTE-EEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred             CeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCCe-EEEeeccccccccCcEEEEECCCCcEEEEE
Confidence            444444458999989999998765543211    1111110111344 44443      3688999999999977543


No 82 
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=97.86  E-value=0.00062  Score=53.49  Aligned_cols=194  Identities=12%  Similarity=0.092  Sum_probs=102.3

Q ss_pred             EEEEEecCCCceeeeeecCCcce---------EEEEECcCC---cEEEEEccCCeEEEEECCCCceeeeeeccCC-----
Q psy16005         39 SVIIRNIENPAISDIYTEHSCAV---------NVAKYSPSG---FYIASGDISGKVRIWDTVNKEHILKNEFHPI-----  101 (248)
Q Consensus        39 ~v~v~~~~~~~~~~~~~~~~~~v---------~~~~~s~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----  101 (248)
                      .|.-.|+++++..-.++.....+         .-+....++   +.++.++.+|.+.++|..+++.+........     
T Consensus       271 sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~  350 (560)
T d1kv9a2         271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK  350 (560)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred             eeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccc
Confidence            56677888888765554322211         111222233   3577789999999999999986643322110     


Q ss_pred             ---------------------------CC--CeeEEEEecCCCEEEEEeCCcEEEEEccCCCCCceeEeCCCC-----CE
Q psy16005        102 ---------------------------GG--PIKDIAWSPDNQRMISIVENGAKVSSLPIDYEPSSISLDHEH-----GL  147 (248)
Q Consensus       102 ---------------------------~~--~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~  147 (248)
                                                 .+  .-...+++|+...++....+...++..........-.+....     ..
T Consensus       351 ~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (560)
T d1kv9a2         351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD  430 (560)
T ss_dssp             ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred             cChhhccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccC
Confidence                                       00  001345566665555554443333322211100000000000     00


Q ss_pred             EEEEcCCCeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcC
Q psy16005        148 VAVGGADSKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP  225 (248)
Q Consensus       148 ~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~  225 (248)
                      .-.+...|.+.-+|  +++.+...+.......-.+.-.+.++++|+.||.++-||.++++.+-....+....-.-+.+..
T Consensus       431 ~p~~~~~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~  510 (560)
T d1kv9a2         431 VPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL  510 (560)
T ss_dssp             CCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             CCCcccccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEE
Confidence            00011235667777  6777777666555544334445668888999999999999999987555443221111245556


Q ss_pred             CCc-EEEE
Q psy16005        226 SNE-YLVA  232 (248)
Q Consensus       226 ~~~-~l~~  232 (248)
                      +|+ ||+.
T Consensus       511 dGkqyv~v  518 (560)
T d1kv9a2         511 AGRQYVAI  518 (560)
T ss_dssp             TTEEEEEE
T ss_pred             CCEEEEEE
Confidence            886 5544


No 83 
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=97.82  E-value=0.0043  Score=48.97  Aligned_cols=66  Identities=15%  Similarity=0.116  Sum_probs=41.1

Q ss_pred             EEEEeC-CcEEEEEecCCCceeeeeecCCc-ceEEEEECc--CCcEEEEEcc------CCeEEEEECCCCceeeee
Q psy16005         31 NFLYTN-GNSVIIRNIENPAISDIYTEHSC-AVNVAKYSP--SGFYIASGDI------SGKVRIWDTVNKEHILKN   96 (248)
Q Consensus        31 ~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~-~v~~~~~s~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~   96 (248)
                      .++.+. |+.|.-.|..+++....+..... .-..+.-+|  -+..++.+..      .|.|+-+|.++++.+.+.
T Consensus       123 ~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~  198 (596)
T d1w6sa_         123 LILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRA  198 (596)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred             EEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEe
Confidence            455555 89999999999998876642111 101111122  1334555543      489999999999987654


No 84 
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.76  E-value=0.0026  Score=44.67  Aligned_cols=190  Identities=15%  Similarity=0.077  Sum_probs=111.1

Q ss_pred             cCCcEEEEeCCCCCEEEEeC--CcEEEEEecCCCc----eeeeeecCCcceEEEEECcCCcEEE-EEccCCeEEEEECCC
Q psy16005         17 RGQPIVLGGDPKGKNFLYTN--GNSVIIRNIENPA----ISDIYTEHSCAVNVAKYSPSGFYIA-SGDISGKVRIWDTVN   89 (248)
Q Consensus        17 ~~~v~~~~~s~~~~~l~~~~--~~~v~v~~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~   89 (248)
                      ...+.+++|++.++.++.+.  .+.|+..+++...    ....+......+.++++.+.++.|+ +-...+.|.+.++..
T Consensus        29 ~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g  108 (266)
T d1ijqa1          29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  108 (266)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecCC
Confidence            34577899999888888874  6677776665322    1222222334566788877555554 445667899999987


Q ss_pred             CceeeeeeccCCCCCeeEEEEecCCCEEEEEeCC-cEEEEEccC------------CCCCceeEeCCCCCEEE-EEcCCC
Q psy16005         90 KEHILKNEFHPIGGPIKDIAWSPDNQRMISIVEN-GAKVSSLPI------------DYEPSSISLDHEHGLVA-VGGADS  155 (248)
Q Consensus        90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~i~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~  155 (248)
                      ....  ............++.+|...+|+....+ ..+|+....            -..+..+++++.++.|. +-...+
T Consensus       109 ~~~~--~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~  186 (266)
T d1ijqa1         109 VKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH  186 (266)
T ss_dssp             SSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred             ceEE--EEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcC
Confidence            6532  2333334668899999976666665432 223333322            23456778887666444 445667


Q ss_pred             eEEEEE-CCceeeee-cc---cCCCceEEEcCCCCEEEEE-cCCCcEEEEEcCCCCCCCcc
Q psy16005        156 KISIVE-NGAKVSSL-PI---DYEPSSISLDHEHGLVAVG-GADSKVHIYELNNKSLSPKA  210 (248)
Q Consensus       156 ~i~~~~-~~~~~~~~-~~---~~~~~~~~~s~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~  210 (248)
                      .|...+ .+.....+ ..   ...+..+++.  +..|..+ ..++.|.-.+..+++.....
T Consensus       187 ~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g~~~~~~  245 (266)
T d1ijqa1         187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL  245 (266)
T ss_dssp             EEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred             EEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCeEEEEECCCCcceEEE
Confidence            888777 33322222 11   1234556665  3445544 46678888887777654333


No 85 
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=97.72  E-value=0.0026  Score=49.82  Aligned_cols=53  Identities=9%  Similarity=0.073  Sum_probs=34.0

Q ss_pred             CcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        194 SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       194 ~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      |.+.-+|+.+++.+-+...+  .+...-..+-.+.++++++.||.++-+|.+|||
T Consensus       438 G~l~A~D~~tGk~~W~~~~~--~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe  490 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE  490 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             cceEEEeCCCCeEeeeccCC--CCCCCceeEECCCEEEEECCCCcEEEEECCCCc
Confidence            45677788777764333222  222211223346678889999999999999986


No 86 
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=97.63  E-value=0.0085  Score=47.09  Aligned_cols=93  Identities=13%  Similarity=0.099  Sum_probs=60.8

Q ss_pred             CCeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCc-EE
Q psy16005        154 DSKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNE-YL  230 (248)
Q Consensus       154 ~~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l  230 (248)
                      .|.+.-+|  +++.+...+...+...-.++..+.++++|+.||.++-+|.++++.+-....+....-.-+.|..+|+ |+
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv  544 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL  544 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             CCeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence            35666677  6777776665555443334456778888999999999999999987655544222112256677885 55


Q ss_pred             EEEc---------------------CCCeEEEEECCC
Q psy16005        231 VASD---------------------AHRKVVLYRVPD  246 (248)
Q Consensus       231 ~~~~---------------------~d~~i~vw~~~~  246 (248)
                      +...                     ..+.|.+|.|.+
T Consensus       545 ~i~ag~g~~~~~~~g~~~~~~~~~~~g~~l~vF~Lp~  581 (582)
T d1flga_         545 GVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPS  581 (582)
T ss_dssp             EEEECCCSHHHHHCTHHHHHHTTCCCCCEEEEEECCC
T ss_pred             EEEeCCCCccccccccccccccccCCCCEEEEEeCCC
Confidence            4332                     135788888765


No 87 
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=97.57  E-value=0.0019  Score=47.20  Aligned_cols=173  Identities=16%  Similarity=0.111  Sum_probs=96.7

Q ss_pred             eEEEEECcCCcEEEEEcc------------CCeEEEEECCCCceee-eeeccCC-----CCCeeEEEE--ecCCC-EEEE
Q psy16005         61 VNVAKYSPSGFYIASGDI------------SGKVRIWDTVNKEHIL-KNEFHPI-----GGPIKDIAW--SPDNQ-RMIS  119 (248)
Q Consensus        61 v~~~~~s~~~~~l~~~~~------------dg~i~iwd~~~~~~~~-~~~~~~~-----~~~v~~~~~--~~~~~-~l~~  119 (248)
                      ..++...|+|..+++++.            .|.|.++|+.+.+... ...+.+.     .-....+..  .++|+ +|++
T Consensus        37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v  116 (340)
T d1v04a_          37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  116 (340)
T ss_dssp             CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence            346777888877766532            4889999987654321 1111111     113345554  34565 4445


Q ss_pred             EeC----CcEEEEEccCC---------------CCCceeEeCCCCCEEEEEcC-----------------CCeEEEEECC
Q psy16005        120 IVE----NGAKVSSLPID---------------YEPSSISLDHEHGLVAVGGA-----------------DSKISIVENG  163 (248)
Q Consensus       120 ~~~----~~~~i~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-----------------~~~i~~~~~~  163 (248)
                      ...    ..+.++++...               ..+..+....++..+++-..                 .+.+..|+.+
T Consensus       117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~  196 (340)
T d1v04a_         117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN  196 (340)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS
T ss_pred             EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC
Confidence            432    23456665422               23456677777777777321                 2234445555


Q ss_pred             ceeeeecccCCCceEEEcCCCCEEEEE-cCCCcEEEEEcCCCCCCCcc-cccCCcCeEEEEEcC-CCcEEEEE
Q psy16005        164 AKVSSLPIDYEPSSISLDHEHGLVAVG-GADSKVHIYELNNKSLSPKA-ELDHLGPVTDCSFSP-SNEYLVAS  233 (248)
Q Consensus       164 ~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~-~~~~~~~v~~~~~s~-~~~~l~~~  233 (248)
                      +.......-..++.++++||+++|+++ +..+.|+.|++......... ...-.+.+-.+.+.+ +|.+.+++
T Consensus       197 ~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         197 DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             ceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            443333334557999999999977666 45678999999754432111 112334566778876 44444443


No 88 
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.47  E-value=0.0079  Score=42.48  Aligned_cols=215  Identities=15%  Similarity=0.171  Sum_probs=130.4

Q ss_pred             EEEeCCCCCEEEEeCCcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCC
Q psy16005         22 VLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPI  101 (248)
Q Consensus        22 ~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  101 (248)
                      +.-.+|..+.||.-++..+.++|+++.+.+..+.- ..+|.-=.|-.+. .|+... +..|+-|+++.... +...+..|
T Consensus        67 sAIMhP~~~IiALrag~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVYHW~~~g~s~-P~k~fdR~  142 (327)
T d1utca2          67 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ-PVKMFDRH  142 (327)
T ss_dssp             EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEEC-SSCCCEEEESSSS-EEEEEC-SSEEEEEESSSSCC-CEEEEECC
T ss_pred             hhhcCCCCcEEEEecCCeEEEEehhHhhhhceEEc-CCCcEEEEecCCC-EEEEEc-CCceEEEcccCCCC-chhhhhhc
Confidence            55678999999888888999999999888877744 4566666776543 454443 35799999965432 33333333


Q ss_pred             ----CCCeeEEEEecCCCEEEEEe----CCc----EEEEEccCCCC----CceeEe---CCC-----CCEEEEE---cCC
Q psy16005        102 ----GGPIKDIAWSPDNQRMISIV----ENG----AKVSSLPIDYE----PSSISL---DHE-----HGLVAVG---GAD  154 (248)
Q Consensus       102 ----~~~v~~~~~~~~~~~l~~~~----~~~----~~i~~~~~~~~----~~~~~~---~~~-----~~~~~~~---~~~  154 (248)
                          ...|-....+++.+.++..+    +++    +.+|..+....    -...+|   .-+     ..+++.+   ...
T Consensus       143 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~  222 (327)
T d1utca2         143 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG  222 (327)
T ss_dssp             GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred             ccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCC
Confidence                34677777888999887665    222    35666542210    011111   111     1123222   233


Q ss_pred             CeEEEEECCce--------eeeecccC-------CCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeE
Q psy16005        155 SKISIVENGAK--------VSSLPIDY-------EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVT  219 (248)
Q Consensus       155 ~~i~~~~~~~~--------~~~~~~~~-------~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~  219 (248)
                      +++.+.+.+..        .+......       -+.++..|+....+..-+.-|.+++||+.++.++..-.. ....|.
T Consensus       223 ~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRI-s~~~iF  301 (327)
T d1utca2         223 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIF  301 (327)
T ss_dssp             EEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEE
T ss_pred             cEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeec-CCCceE
Confidence            67788772221        11111111       145778888888888899999999999999998655442 344555


Q ss_pred             EEEEcCCCcEEEEEcCCCeEEE
Q psy16005        220 DCSFSPSNEYLVASDAHRKVVL  241 (248)
Q Consensus       220 ~~~~s~~~~~l~~~~~d~~i~v  241 (248)
                      .-+-..+..-+++...+|.|.-
T Consensus       302 ~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         302 VTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             EEEEETTTTEEEEEETTSEEEE
T ss_pred             EeccCCCCceEEEECCCCeEEE
Confidence            5455555445666667776653


No 89 
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=97.35  E-value=0.02  Score=44.83  Aligned_cols=75  Identities=15%  Similarity=0.026  Sum_probs=52.7

Q ss_pred             EEEEeCCcEEEEEccCCCCCceeEeCCCCCEEEEEcCCCeEEEEE--CCceeeeecccCCCc--eEEEcCCCC-EEEEEc
Q psy16005        117 MISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKISIVE--NGAKVSSLPIDYEPS--SISLDHEHG-LVAVGG  191 (248)
Q Consensus       117 l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~--~~~~s~~~~-~l~~~~  191 (248)
                      .+.--..+..+|..+.......=.+.-.+.++++++.|+.++.+|  +|+.+.++.....+.  -+.+..+|+ ++++.+
T Consensus       460 ~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~v~~  539 (573)
T d1kb0a2         460 LAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAV  539 (573)
T ss_dssp             EEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             EEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEEe
Confidence            333345677889887766554434455677888899999999999  899999888766543  356667787 555443


No 90 
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=97.25  E-value=0.0063  Score=47.77  Aligned_cols=75  Identities=13%  Similarity=0.113  Sum_probs=49.0

Q ss_pred             CeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccC---CcCeEEEEEcCCCc-
Q psy16005        155 SKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH---LGPVTDCSFSPSNE-  228 (248)
Q Consensus       155 ~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~---~~~v~~~~~s~~~~-  228 (248)
                      |.+.-+|  +++.+...+...+...-..+-.+.++++|+.||.++.||.++++.+-.+..+.   ..+   +.|..||+ 
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P---~ty~~~GkQ  533 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP---STYMVDGRQ  533 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETTEE
T ss_pred             ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccC---EEEEECCEE
Confidence            4566677  66777666655443333344457788889999999999999999875554432   222   44556786 


Q ss_pred             EEEE
Q psy16005        229 YLVA  232 (248)
Q Consensus       229 ~l~~  232 (248)
                      |++.
T Consensus       534 Yv~v  537 (573)
T d1kb0a2         534 YVSV  537 (573)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4443


No 91 
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.05  E-value=0.025  Score=39.92  Aligned_cols=204  Identities=12%  Similarity=0.146  Sum_probs=123.0

Q ss_pred             CcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCE
Q psy16005         37 GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR  116 (248)
Q Consensus        37 ~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  116 (248)
                      ...+.+.|+.++..+..-.-   .--+.-.+|..+.||.-+ ..++.++|+++.+.+....+.   .+|.--.|-. .+.
T Consensus        44 ~~~VvIidl~n~~~~~Rrpi---~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~---e~VvfWkWis-~~~  115 (327)
T d1utca2          44 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWIS-LNT  115 (327)
T ss_dssp             EEEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS---SCCCEEEESS-SSE
T ss_pred             CceEEEEECCCCCcceeccc---chhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcC---CCcEEEEecC-CCE
Confidence            45888899876554322211   112344789888887655 568999999999877655554   5677777764 567


Q ss_pred             EEEEeCCcEEEEEccCCCCCc---------------eeEeCCCCCEEEEEc---C----CCeEEEEEC-CceeeeecccC
Q psy16005        117 MISIVENGAKVSSLPIDYEPS---------------SISLDHEHGLVAVGG---A----DSKISIVEN-GAKVSSLPIDY  173 (248)
Q Consensus       117 l~~~~~~~~~i~~~~~~~~~~---------------~~~~~~~~~~~~~~~---~----~~~i~~~~~-~~~~~~~~~~~  173 (248)
                      |+...+..+.-|+++.+..+.               ....+++.+.++..+   .    .|.+.+|.. .+.-+.++.+.
T Consensus       116 L~lVT~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGha  195 (327)
T d1utca2         116 VALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHA  195 (327)
T ss_dssp             EEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSE
T ss_pred             EEEEcCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCcccccee
Confidence            888888888889886544332               234466677655432   2    256677773 33333333221


Q ss_pred             CC-ceEEEc--CC-CCEEEEE---cCCCcEEEEEcCCCCC-CCc-------cccc---CCcCeEEEEEcCCCcEEEEEcC
Q psy16005        174 EP-SSISLD--HE-HGLVAVG---GADSKVHIYELNNKSL-SPK-------AELD---HLGPVTDCSFSPSNEYLVASDA  235 (248)
Q Consensus       174 ~~-~~~~~s--~~-~~~l~~~---~~d~~v~i~d~~~~~~-~~~-------~~~~---~~~~v~~~~~s~~~~~l~~~~~  235 (248)
                      .. ..+.+.  ++ ...++.+   ...+.++|.++..... ...       ...+   -.+-.-++..|+.-..++..+.
T Consensus       196 a~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK  275 (327)
T d1utca2         196 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK  275 (327)
T ss_dssp             EEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEET
T ss_pred             eeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEec
Confidence            10 111111  11 1133333   2236799999876321 111       1111   2345678888988888999999


Q ss_pred             CCeEEEEECCCCC
Q psy16005        236 HRKVVLYRVPDFE  248 (248)
Q Consensus       236 d~~i~vw~~~~~~  248 (248)
                      -|.+++||++|+.
T Consensus       276 ~G~i~lyDleTgt  288 (327)
T d1utca2         276 YGYIHLYDLETGT  288 (327)
T ss_dssp             TSEEEEEETTTCC
T ss_pred             CcEEEEEEccccc
Confidence            9999999999873


No 92 
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=96.96  E-value=0.056  Score=42.44  Aligned_cols=193  Identities=9%  Similarity=0.015  Sum_probs=101.3

Q ss_pred             EEEEEecCCCceeeeeecCC---------cceEEEEE-CcCC---cEEEEEccCCeEEEEECCCCceeeeeeccCCCCC-
Q psy16005         39 SVIIRNIENPAISDIYTEHS---------CAVNVAKY-SPSG---FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGP-  104 (248)
Q Consensus        39 ~v~v~~~~~~~~~~~~~~~~---------~~v~~~~~-s~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-  104 (248)
                      .+.-.|+++++..-.++...         ....-+.. ..+|   +.++....+|.+.++|..+++.+........... 
T Consensus       279 sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~  358 (596)
T d1w6sa_         279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVF  358 (596)
T ss_dssp             EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred             cccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeecccccccccc
Confidence            57778999998876554211         11112221 2233   4678889999999999999986643322110000 


Q ss_pred             ------------------------------------eeEEEEecCCCEEEEEeCCcEEEEEccCCCCC-----c----ee
Q psy16005        105 ------------------------------------IKDIAWSPDNQRMISIVENGAKVSSLPIDYEP-----S----SI  139 (248)
Q Consensus       105 ------------------------------------v~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~-----~----~~  139 (248)
                                                          -...+++|+...++....+....+........     .    ..
T Consensus       359 ~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~  438 (596)
T d1w6sa_         359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM  438 (596)
T ss_dssp             EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred             ccccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEeccccccccccccccccccccccccccccc
Confidence                                                01235666656555554443333322110000     0    00


Q ss_pred             EeCCCCCEEEEEcCCCeEEEEE--CCceeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcC
Q psy16005        140 SLDHEHGLVAVGGADSKISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP  217 (248)
Q Consensus       140 ~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~  217 (248)
                      ...+.+... .....|.|.-||  +++.+...........-.++-.+.+++.|+.||.++-||.++++.+-+...+....
T Consensus       439 ~~~~~g~~~-~~~~~G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~  517 (596)
T d1w6sa_         439 YPGPKGDRQ-NYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI  517 (596)
T ss_dssp             EECTTSBTT-TTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred             ccCcccCcc-cCCCcceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcc
Confidence            111111000 000124566677  66666665555444433344456788889999999999999999875554432111


Q ss_pred             eEEEEEcCCCc-EEEE
Q psy16005        218 VTDCSFSPSNE-YLVA  232 (248)
Q Consensus       218 v~~~~~s~~~~-~l~~  232 (248)
                      -.=+.|..||+ |++.
T Consensus       518 a~P~tY~~dGkQYvav  533 (596)
T d1w6sa_         518 GYPMTYTHKGTQYVAI  533 (596)
T ss_dssp             SCCEEEEETTEEEEEE
T ss_pred             cCCeEEEECCEEEEEE
Confidence            11244556776 4543


No 93 
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=96.70  E-value=0.023  Score=41.65  Aligned_cols=72  Identities=17%  Similarity=0.290  Sum_probs=48.9

Q ss_pred             ceEEEcCCCCEEEEEcCC-CcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCC------CeEEEEECCCC
Q psy16005        176 SSISLDHEHGLVAVGGAD-SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH------RKVVLYRVPDF  247 (248)
Q Consensus       176 ~~~~~s~~~~~l~~~~~d-~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~vw~~~~~  247 (248)
                      ...++.++|++++.|+.+ ..+.+||..+..-...........-...+..+||+.++.++.+      ..+.+||..+.
T Consensus        79 ~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~  157 (387)
T d1k3ia3          79 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK  157 (387)
T ss_dssp             CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred             eEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCC
Confidence            456788999999988765 5799999987654322211122223456778899998888643      46888988664


No 94 
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=96.51  E-value=0.083  Score=38.32  Aligned_cols=173  Identities=12%  Similarity=0.210  Sum_probs=102.2

Q ss_pred             CCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEec----C--CCEEEEEeC-----CcEEEEEccCC----
Q psy16005         69 SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP----D--NQRMISIVE-----NGAKVSSLPID----  133 (248)
Q Consensus        69 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~----~--~~~l~~~~~-----~~~~i~~~~~~----  133 (248)
                      +..+++.....+-|.+||+. |+.+.  .+.  .+.+..+..-.    .  ...++++++     ..+.+|.+...    
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~--~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l  113 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLH--SYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEE--ECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEE--ecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence            45666666777779999996 55432  222  24555554332    2  223445542     23456665311    


Q ss_pred             --------------CCCceeEe--CCC-CC-EEEEEcCCCeEEEEE---CC------ceeeeecccCCCceEEEcCCCCE
Q psy16005        134 --------------YEPSSISL--DHE-HG-LVAVGGADSKISIVE---NG------AKVSSLPIDYEPSSISLDHEHGL  186 (248)
Q Consensus       134 --------------~~~~~~~~--~~~-~~-~~~~~~~~~~i~~~~---~~------~~~~~~~~~~~~~~~~~s~~~~~  186 (248)
                                    ..+..+++  ++. +. ++++...+|.+..|.   .+      +.++.+.....+..++++.....
T Consensus       114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~  193 (353)
T d1h6la_         114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGS  193 (353)
T ss_dssp             EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred             ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCc
Confidence                          12445565  554 44 455667788888775   12      34556677778889999999899


Q ss_pred             EEEEcCCCcEEEEEcCCCCCCCcc-----cc-cCCcCeEEEEEcC--CCc-EEEEE-cCCCeEEEEECCC
Q psy16005        187 VAVGGADSKVHIYELNNKSLSPKA-----EL-DHLGPVTDCSFSP--SNE-YLVAS-DAHRKVVLYRVPD  246 (248)
Q Consensus       187 l~~~~~d~~v~i~d~~~~~~~~~~-----~~-~~~~~v~~~~~s~--~~~-~l~~~-~~d~~i~vw~~~~  246 (248)
                      |.++-++.-|..++..........     .. ...+.+..|+.-.  +++ ||+++ -.+++..+||..+
T Consensus       194 LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~  263 (353)
T d1h6la_         194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQG  263 (353)
T ss_dssp             EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred             EEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCC
Confidence            999988877777776532211111     11 1345677777543  333 55544 4578999999865


No 95 
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=95.91  E-value=0.22  Score=37.46  Aligned_cols=106  Identities=13%  Similarity=0.203  Sum_probs=62.2

Q ss_pred             cCCcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeeee--------cCCcceEEEEECcC---CcEEEEE-c------
Q psy16005         17 RGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYT--------EHSCAVNVAKYSPS---GFYIASG-D------   77 (248)
Q Consensus        17 ~~~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~~--------~~~~~v~~~~~s~~---~~~l~~~-~------   77 (248)
                      -..+.+|+|.|||+++++-. .|.|++++..+++......        .-......++++|+   ..+++.. +      
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~~  105 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCCC
Confidence            35788999999999999885 7999999877765432211        11346789999994   3444432 1      


Q ss_pred             cC----Ce--EEEEECCCCcee------eeeec-cCCCCCeeEEEEecCCCEEEEEeC
Q psy16005         78 IS----GK--VRIWDTVNKEHI------LKNEF-HPIGGPIKDIAWSPDNQRMISIVE  122 (248)
Q Consensus        78 ~d----g~--i~iwd~~~~~~~------~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~  122 (248)
                      .+    ..  +..+........      ....+ .........|.|.|||.+.++.++
T Consensus       106 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_         106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence            01    11  333333222110      00111 111234578999999988877764


No 96 
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=95.51  E-value=0.31  Score=36.29  Aligned_cols=59  Identities=19%  Similarity=0.286  Sum_probs=41.0

Q ss_pred             ceEEEEECcCCcEEEEE-ccC----CeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEe
Q psy16005         60 AVNVAKYSPSGFYIASG-DIS----GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIV  121 (248)
Q Consensus        60 ~v~~~~~s~~~~~l~~~-~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  121 (248)
                      .+...++||++++++.+ +..    ..++++|+.+++.+. ..+..  .....++|.+|++.|+...
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~-~~i~~--~~~~~~~W~~D~~~~~Y~~  189 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP-DVLER--VKFSCMAWTHDGKGMFYNA  189 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE-EEEEE--ECSCCEEECTTSSEEEEEE
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecc-ccccc--ccccceEEcCCCCEEEEEE
Confidence            45567889999988753 333    369999999998653 22221  2235689999999887764


No 97 
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=94.94  E-value=0.5  Score=35.45  Aligned_cols=55  Identities=11%  Similarity=0.068  Sum_probs=39.5

Q ss_pred             cceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeecc------CCCCCeeEEEEecC
Q psy16005         59 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFH------PIGGPIKDIAWSPD  113 (248)
Q Consensus        59 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~  113 (248)
                      ...++++|.||++++++--..|.|++++..+++......+.      .-......++|+|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            45679999999998888656799999998777643222221      12356788999985


No 98 
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=94.87  E-value=0.059  Score=42.20  Aligned_cols=81  Identities=14%  Similarity=0.106  Sum_probs=54.1

Q ss_pred             cEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeeeeccCCCCCeeEEEEecCCC-E
Q psy16005         38 NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ-R  116 (248)
Q Consensus        38 ~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~  116 (248)
                      |.+.-+|+.+++..-....+ .++..-..+..+.++++|+.||.++.+|.++|+.+....+..-.. -.-+.|..+|+ +
T Consensus       466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~-~~P~ty~~~G~qY  543 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIV-SPPITWEQDGEQY  543 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-SCCEEEEETTEEE
T ss_pred             CeEEEEcCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCcc-ccCEEEEECCEEE
Confidence            56777888888877666433 222222233466788889999999999999999988777654221 12266777885 4


Q ss_pred             EEEE
Q psy16005        117 MISI  120 (248)
Q Consensus       117 l~~~  120 (248)
                      ++..
T Consensus       544 v~i~  547 (582)
T d1flga_         544 LGVT  547 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4443


No 99 
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.70  E-value=0.51  Score=34.46  Aligned_cols=185  Identities=8%  Similarity=0.035  Sum_probs=90.2

Q ss_pred             cCCcEEEEeCCCCCEEEEeCCcEEEEEecCC---------CceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEEC
Q psy16005         17 RGQPIVLGGDPKGKNFLYTNGNSVIIRNIEN---------PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDT   87 (248)
Q Consensus        17 ~~~v~~~~~s~~~~~l~~~~~~~v~v~~~~~---------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~   87 (248)
                      .....-++.++...++++|+...+.|..+..         ..........-..|..++|+.+  .|+.. .++.+..++.
T Consensus        36 ~~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v~-~~~~l~~~~~  112 (381)
T d1xipa_          36 FASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLVS-TRNALYSLDL  112 (381)
T ss_dssp             SSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEEE-ESSEEEEEES
T ss_pred             ccccceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEEE-eCCCEEEEEe
Confidence            3566778888887788877755677765431         0101111112235888999754  45443 4567888887


Q ss_pred             CCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccCCCCCceeEeCCCCCEEEEEcCCCeEEEEECCceee
Q psy16005         88 VNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKISIVENGAKVS  167 (248)
Q Consensus        88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  167 (248)
                      ..-...  ........++..+.++|.. .++....+..-++.+...                      ...-.-  ....
T Consensus       113 ~~l~~~--~~~~~~~~~~~~~~~~p~~-~~l~~~~~~~~~~~l~~~----------------------~~~~~~--~~v~  165 (381)
T d1xipa_         113 EELSEF--RTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTK----------------------STKQLA--QNVT  165 (381)
T ss_dssp             SSTTCE--EEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTC----------------------CEEEEE--ESEE
T ss_pred             eccccc--cccccccccccceecCCce-eEEEecCCCEEEEEeccC----------------------cccccc--CCcc
Confidence            654322  1222234567777776642 222212222222222111                      000000  0011


Q ss_pred             eecccCCCceEEEcCCCCEEEEEcCCCcEEE-EEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEE
Q psy16005        168 SLPIDYEPSSISLDHEHGLVAVGGADSKVHI-YELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS  233 (248)
Q Consensus       168 ~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i-~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  233 (248)
                      .+.......+++|++.|+.++++..++ ..+ -++.....+... ......|.++.|-.+..++++-
T Consensus       166 ~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p-~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         166 SFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEEL-PVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             EEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTS-CTTTSEEEEEEESSSSEEEEEE
T ss_pred             eEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCC-cCCCcceeEEEEecCceEEEEE
Confidence            122334567788888888877764332 221 122221111111 1234467888998777766544


No 100
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.46  E-value=0.95  Score=32.99  Aligned_cols=129  Identities=11%  Similarity=0.042  Sum_probs=83.0

Q ss_pred             CcEEEEeCCCCCEEEEeCCcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeeee--
Q psy16005         19 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN--   96 (248)
Q Consensus        19 ~v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--   96 (248)
                      .|..++|+.|  .+++..++.+..++...-........-..++..+.++|.  .++....+|.+.++++..++.....  
T Consensus        88 ~v~~vafs~d--~l~v~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~  163 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQN  163 (381)
T ss_dssp             TEEEEEEETT--EEEEEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEES
T ss_pred             CeEEEEeeCC--EEEEEeCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCC
Confidence            5788999744  577777777888887664444444444567888888875  4555667899999999887532111  


Q ss_pred             -eccCCCCCeeEEEEecCCCEEEEEeCCcEEEE-Ecc----------CCCCCceeEeCCCCCEEEEE
Q psy16005         97 -EFHPIGGPIKDIAWSPDNQRMISIVENGAKVS-SLP----------IDYEPSSISLDHEHGLVAVG  151 (248)
Q Consensus        97 -~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~-~~~----------~~~~~~~~~~~~~~~~~~~~  151 (248)
                       .-..-.+.+.+++|++.|+.++++..+...+. ++.          .+..+.++.|-.+..++++-
T Consensus       164 v~~~~~~~~~~~v~ws~kgkq~v~~~g~~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         164 VTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             EEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             cceEEecCCceEEEEeCCcEEEEEeCCCceeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence             00112467889999999999988765544332 221          23345677777666655543


No 101
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=92.98  E-value=1.1  Score=32.17  Aligned_cols=171  Identities=13%  Similarity=0.086  Sum_probs=96.5

Q ss_pred             cEEEEeCCCCCEEEEeC-------------CcEEEEEecCCCceee-eee--cC-----CcceEEEEE--CcCCc-EEEE
Q psy16005         20 PIVLGGDPKGKNFLYTN-------------GNSVIIRNIENPAISD-IYT--EH-----SCAVNVAKY--SPSGF-YIAS   75 (248)
Q Consensus        20 v~~~~~s~~~~~l~~~~-------------~~~v~v~~~~~~~~~~-~~~--~~-----~~~v~~~~~--s~~~~-~l~~   75 (248)
                      .-.+...|+|..+++++             .|.+.++|+.+.+... .+.  +.     .-....+..  .++++ +|++
T Consensus        37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v  116 (340)
T d1v04a_          37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  116 (340)
T ss_dssp             CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence            44688899998877653             2789999987654321 121  11     012234443  34554 3444


Q ss_pred             E---ccCCeEEEEECCCCc--eeeeeecc-CCCCCeeEEEEecCCCEEEEEeC----------------CcEEEEEccC-
Q psy16005         76 G---DISGKVRIWDTVNKE--HILKNEFH-PIGGPIKDIAWSPDNQRMISIVE----------------NGAKVSSLPI-  132 (248)
Q Consensus        76 ~---~~dg~i~iwd~~~~~--~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~----------------~~~~i~~~~~-  132 (248)
                      .   ....+|.+|++....  ......+. ........+++..++..+++-..                ....++..+. 
T Consensus       117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~  196 (340)
T d1v04a_         117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN  196 (340)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS
T ss_pred             EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC
Confidence            3   345678888875443  22222222 12345789999999987777321                1123333322 


Q ss_pred             --------CCCCceeEeCCCCCEEEE-EcCCCeEEEEE-CC----ceeeeecccCCCceEEEcC-CCCEEEEE
Q psy16005        133 --------DYEPSSISLDHEHGLVAV-GGADSKISIVE-NG----AKVSSLPIDYEPSSISLDH-EHGLVAVG  190 (248)
Q Consensus       133 --------~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~-~~----~~~~~~~~~~~~~~~~~s~-~~~~l~~~  190 (248)
                              -..+..++++|+++.+++ -+..+.|+.|+ .+    .....+.....+-.+.+.+ +|.+.+.+
T Consensus       197 ~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         197 DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             ceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence                    234678899999886654 45677888887 21    1223334555667788876 45544443


No 102
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=90.40  E-value=2.2  Score=30.63  Aligned_cols=180  Identities=14%  Similarity=0.182  Sum_probs=96.3

Q ss_pred             EEEeCCC---CCEEEEeC-CcEEEEEecCCCceeeeeecCCcceEEEEEC------cCCcEEEEEc-c-C--CeEEEEEC
Q psy16005         22 VLGGDPK---GKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYS------PSGFYIASGD-I-S--GKVRIWDT   87 (248)
Q Consensus        22 ~~~~s~~---~~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s------~~~~~l~~~~-~-d--g~i~iwd~   87 (248)
                      ++-++|.   ..+++... .+-|++||++ |+.++.+.  .+.+..+..-      ....-++.++ + +  -+|.+|.+
T Consensus        30 AIW~n~~~p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~i  106 (353)
T d1h6la_          30 AIWLDPKNPQNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI  106 (353)
T ss_dssp             EEECCSSCGGGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEE
T ss_pred             eEEcCCCCcCccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEe
Confidence            4556664   34555544 5569999985 77666553  3455555443      2222344444 2 2  36778877


Q ss_pred             CCCce-eeeeecc-----CCCCCeeEEEE--ecC-CCEEEE-EeCCc-EEEEEcc----------------CCCCCceeE
Q psy16005         88 VNKEH-ILKNEFH-----PIGGPIKDIAW--SPD-NQRMIS-IVENG-AKVSSLP----------------IDYEPSSIS  140 (248)
Q Consensus        88 ~~~~~-~~~~~~~-----~~~~~v~~~~~--~~~-~~~l~~-~~~~~-~~i~~~~----------------~~~~~~~~~  140 (248)
                      ..... +......     .....++.+++  ++. +...+. ....+ +..|.+.                ....+..+.
T Consensus       107 d~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCV  186 (353)
T d1h6la_         107 DGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMA  186 (353)
T ss_dssp             ETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEE
T ss_pred             cCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEE
Confidence            53221 1111111     11234677777  554 444333 34344 3445442                234456777


Q ss_pred             eCCCCCEEEEEcCCCeEEEEEC----Cc---eeeee---cccCCCceEEEc--CCCC-EEEEE-cCCCcEEEEEcCCC
Q psy16005        141 LDHEHGLVAVGGADSKISIVEN----GA---KVSSL---PIDYEPSSISLD--HEHG-LVAVG-GADSKVHIYELNNK  204 (248)
Q Consensus       141 ~~~~~~~~~~~~~~~~i~~~~~----~~---~~~~~---~~~~~~~~~~~s--~~~~-~l~~~-~~d~~v~i~d~~~~  204 (248)
                      ++.+...|..+-++..+..++.    ..   .+...   .+...+..+++-  +++. +|+++ -.+++..+||..+.
T Consensus       187 vDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~  264 (353)
T d1h6la_         187 ADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQ  264 (353)
T ss_dssp             EETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred             EeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            8888888888888877766651    11   11111   123345556543  3444 55544 45788999998764


No 103
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=87.63  E-value=2.7  Score=27.93  Aligned_cols=147  Identities=10%  Similarity=0.176  Sum_probs=70.5

Q ss_pred             CcEEEEeCCCCCEEEEeC-CcEEEEEecCCCceeeee--ecC-------CcceEEEEE-CcCCcEEEEEcc-CCeEEEEE
Q psy16005         19 QPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIY--TEH-------SCAVNVAKY-SPSGFYIASGDI-SGKVRIWD   86 (248)
Q Consensus        19 ~v~~~~~s~~~~~l~~~~-~~~v~v~~~~~~~~~~~~--~~~-------~~~v~~~~~-s~~~~~l~~~~~-dg~i~iwd   86 (248)
                      +|.++++. +.+..++|+ .+...+|-++.|+.....  ...       .+-|..+.+ .++.+-++++.- .|.++|++
T Consensus       105 RI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~t  183 (313)
T d2hu7a1         105 RILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFD  183 (313)
T ss_dssp             EEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEEC
T ss_pred             EEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEec
Confidence            45555554 233444453 667777777777654321  111       122333333 233334555554 67777777


Q ss_pred             CCCCceeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccCC------CCCceeE---eCCCCCEEEEEcCCCeE
Q psy16005         87 TVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPID------YEPSSIS---LDHEHGLVAVGGADSKI  157 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~i  157 (248)
                      ...+..-....+.+  ..|.+=-=++-..+.++..-..-.+-++..+      ..+..+.   +.|++++++.+-.||.-
T Consensus       184 pkeGS~~~ay~~~g--nKV~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s  261 (313)
T d2hu7a1         184 SGEGSFSSASISPG--MKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRS  261 (313)
T ss_dssp             CSSEEEEEEEECTT--SCEEEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred             CCCCcccceeEccC--ceeeeccCCCCceEEEEEecccCceeeeecCcccceeecceEEEeeeeCCCCcEEEEEecCCch
Confidence            66554322222221  1121100011112222221111111122221      2344555   78999888888889998


Q ss_pred             EEEECCceeee
Q psy16005        158 SIVENGAKVSS  168 (248)
Q Consensus       158 ~~~~~~~~~~~  168 (248)
                      .++..++.+..
T Consensus       262 ~lF~nGk~in~  272 (313)
T d2hu7a1         262 AVFIDGERVEA  272 (313)
T ss_dssp             EEEETTEEECC
T ss_pred             heeecceEecC
Confidence            88888877643


No 104
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.65  E-value=5.7  Score=26.75  Aligned_cols=64  Identities=17%  Similarity=0.220  Sum_probs=33.3

Q ss_pred             CCCEEEEEcCC-----CcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCC-----CeEEEEECCCC
Q psy16005        183 EHGLVAVGGAD-----SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH-----RKVVLYRVPDF  247 (248)
Q Consensus       183 ~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~vw~~~~~  247 (248)
                      ++.+++.|+.+     .....||..+.+............-.+++. .+++.++.|+.+     ..+.+||+.+.
T Consensus       195 ~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~  268 (288)
T d1zgka1         195 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTD  268 (288)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             eeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEE-ECCEEEEEecCCCCeecceEEEEECCCC
Confidence            45566666544     357788877655322111111111112222 367877777654     34788988764


No 105
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=76.98  E-value=7.9  Score=25.65  Aligned_cols=199  Identities=9%  Similarity=0.002  Sum_probs=96.5

Q ss_pred             CCEEEEe-CCcEEEEEecCCCceeeeeecCCcceEEEEE-CcCCcEEEEE------ccCCeEEEEECCCCceeeeeeccC
Q psy16005         29 GKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKY-SPSGFYIASG------DISGKVRIWDTVNKEHILKNEFHP  100 (248)
Q Consensus        29 ~~~l~~~-~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~------~~dg~i~iwd~~~~~~~~~~~~~~  100 (248)
                      .+.++.+ +.|.+.++-+..++.++.-   ..+|....- .+.=.++...      -.-..|.+-++......  +.+..
T Consensus        26 d~ll~~~~seG~vni~~l~g~~~vkLt---kePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE--~~i~s  100 (313)
T d2hu7a1          26 DKLLVVGFSEGSVNAYLYDGGETVKLN---REPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEE--QRLEA  100 (313)
T ss_dssp             TEEEEEEEETTEEEEEEESSSSCEECC---SSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCE--EECTT
T ss_pred             CcEEEEEeccceEEEEEEeCCEEEEEe---cccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCee--eEecC
Confidence            3456666 5899999888877766533   233332211 1111222221      22335666666532221  33332


Q ss_pred             CC-CCeeEEEEecCCCEEE-E-EeCCcEEEEEccCCC-------CCceeEe-------------CCCCCEEEEEc-CCCe
Q psy16005        101 IG-GPIKDIAWSPDNQRMI-S-IVENGAKVSSLPIDY-------EPSSISL-------------DHEHGLVAVGG-ADSK  156 (248)
Q Consensus       101 ~~-~~v~~~~~~~~~~~l~-~-~~~~~~~i~~~~~~~-------~~~~~~~-------------~~~~~~~~~~~-~~~~  156 (248)
                      .. -.|.++++  |++.++ + +++++..+|.++.+.       ++.++.-             .+...-+.++. ..|.
T Consensus       101 pk~vRI~S~~y--ddk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~  178 (313)
T d2hu7a1         101 VKPMRILSGVD--TGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG  178 (313)
T ss_dssp             SCSBEEEEEEE--CSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEE
T ss_pred             CceEEEEEeee--cCceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCC
Confidence            22 34555555  444333 3 346777777665332       1122211             12222223333 2555


Q ss_pred             EEEEECCceeeeecccCCCceEEEcCCCCEEEEEcC---CCcEEEEEcCCCCCCCccccc------CCcCeEEEEEcCCC
Q psy16005        157 ISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA---DSKVHIYELNNKSLSPKAELD------HLGPVTDCSFSPSN  227 (248)
Q Consensus       157 i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~---d~~v~i~d~~~~~~~~~~~~~------~~~~v~~~~~s~~~  227 (248)
                      +++++.++        ..++.....|..+. +++-+   +....-+|++.++....-...      ..-.|+-+-+.|++
T Consensus       179 lri~tpke--------GS~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd  249 (313)
T d2hu7a1         179 LRVFDSGE--------GSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG  249 (313)
T ss_dssp             EEEECCSS--------EEEEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTS
T ss_pred             EEEecCCC--------CcccceeEccCcee-eeccCCCCceEEEEEecccCceeeeecCcccceeecceEEEeeeeCCCC
Confidence            66655332        23344455555544 43322   112224577766542221111      23345666789999


Q ss_pred             cEEEEEcCCCeEEEEE
Q psy16005        228 EYLVASDAHRKVVLYR  243 (248)
Q Consensus       228 ~~l~~~~~d~~i~vw~  243 (248)
                      ++++.+-.||.-++|.
T Consensus       250 ~L~iiakrdG~s~lF~  265 (313)
T d2hu7a1         250 RLAVVARREGRSAVFI  265 (313)
T ss_dssp             CEEEEEEETTEEEEEE
T ss_pred             cEEEEEecCCchheee
Confidence            9988888888877774


No 106
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=70.07  E-value=11  Score=24.32  Aligned_cols=99  Identities=10%  Similarity=-0.015  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCCCCEEEEeCCcEEEEEecCCCcee------eeee-cCCcceEEEEECcCCcEEEEEccCCeEEEEECCCC
Q psy16005         18 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAIS------DIYT-EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK   90 (248)
Q Consensus        18 ~~v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~------~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~   90 (248)
                      ..+.-++|||+|++.++-.+ .++.=...+....      +.+- +-=+....+.|+|.|-+.++.  ++.++-=...+.
T Consensus        40 ~n~~~i~fsP~G~LyaVr~~-~lY~Gp~~s~~nq~wf~~atrIG~ggWn~FkflffdP~G~LyaVt--~~~LYr~~pPtn  116 (235)
T d1tl2a_          40 SNFKFLFLSPGGELYGVLND-KIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS--KDKLYKASPPQS  116 (235)
T ss_dssp             TTCSEEEECTTSCEEEEETT-EEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE--TTEEEEESCCCS
T ss_pred             cceeEEEECCCCcEEEEECC-eEEECCCCCcchHHHHHhhhhcccCcccceEEEEECCCceEEEec--CcceecCCcCcc
Confidence            45667999999998887766 5555444432211      1111 112345578899998766665  354433222222


Q ss_pred             cee-----eeeeccCCCCCeeEEEEecCCCEEEE
Q psy16005         91 EHI-----LKNEFHPIGGPIKDIAWSPDNQRMIS  119 (248)
Q Consensus        91 ~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~  119 (248)
                      +..     ....-...-..+..+-|.|+|..-++
T Consensus       117 ~~q~W~g~a~~vG~~gw~df~~lFFdP~G~LYaV  150 (235)
T d1tl2a_         117 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAV  150 (235)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEE
T ss_pred             cchhhhhhhhhhccCCcCceeEEEECCCceEEEE
Confidence            210     00011111235667888888876665


No 107
>d1q47a_ b.69.12.1 (A:) Semaphorin 3a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.90  E-value=6.8  Score=29.50  Aligned_cols=56  Identities=11%  Similarity=0.086  Sum_probs=36.0

Q ss_pred             EEEEEcCCCcEEEEEc-CCCC-------CCCcc-cccCCcCeEEEEEcCCCcEEEEEcCCCeEEE
Q psy16005        186 LVAVGGADSKVHIYEL-NNKS-------LSPKA-ELDHLGPVTDCSFSPSNEYLVASDAHRKVVL  241 (248)
Q Consensus       186 ~l~~~~~d~~v~i~d~-~~~~-------~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v  241 (248)
                      .+..|+.+|.|.-.-+ ..+.       .+... ...+..+|..|.+++++++|+.++.++.++|
T Consensus       423 V~flGT~~G~l~Kv~~~~~~~~~~~~~~~iee~~~~~~~~pI~~l~l~~~~~~Lyv~t~~~V~~v  487 (495)
T d1q47a_         423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL  487 (495)
T ss_dssp             EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred             EEEEEcCCCEEEEEEEcCCCCccccceeEEEEEeecCCCCceEEEEEeCCCCEEEEEeCCeEEEE
Confidence            6777888888663222 1111       11111 1146678999999999999999998876664


No 108
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}
Probab=64.61  E-value=10  Score=21.91  Aligned_cols=25  Identities=12%  Similarity=-0.128  Sum_probs=12.5

Q ss_pred             eeEEEEecCCCEEEEEeCCcEEEEEc
Q psy16005        105 IKDIAWSPDNQRMISIVENGAKVSSL  130 (248)
Q Consensus       105 v~~~~~~~~~~~l~~~~~~~~~i~~~  130 (248)
                      ...+.+.++|..++.. .++..+|.-
T Consensus        57 ~~~l~l~~dGNLvl~d-~~~~~vWsS   81 (115)
T d1dlpa1          57 GCRAVLQSDGLLVILT-AQNTIRWSS   81 (115)
T ss_dssp             CCBCCBCSSSCBCCBC-TTTCCSCCC
T ss_pred             ceEEEEeccCCEEEEc-cCCCEEEEc
Confidence            3445566677655442 233345543


No 109
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}
Probab=59.55  E-value=13  Score=21.17  Aligned_cols=44  Identities=9%  Similarity=0.027  Sum_probs=25.6

Q ss_pred             eEEEEecCCCEEEEEeCCcEEEEEccCC--CCCceeEeCCCCCEEEE
Q psy16005        106 KDIAWSPDNQRMISIVENGAKVSSLPID--YEPSSISLDHEHGLVAV  150 (248)
Q Consensus       106 ~~~~~~~~~~~l~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~  150 (248)
                      ..+.+.++|+.++.. .++..+|.-...  .....+.+.++|++++.
T Consensus        53 ~~l~l~~dGnLvl~~-~~g~~vW~s~t~~~~~~~~l~L~ddGNlvly   98 (109)
T d1kj1a_          53 CKAVLQSDGNFVVYD-AEGRSLWASHSVRGNGNYVLVLQEDGNVVIY   98 (109)
T ss_dssp             CEEEECTTSCEEEEC-SSSCEEEECCCCCCSSCCEEEECTTSCEEEE
T ss_pred             EEEEEcCCceEEEEe-CCCcEEEEEeeECCCCCEEEEEeCCCcEEEE
Confidence            347788888865543 445567776433  22234556666666554


No 110
>d1q47a_ b.69.12.1 (A:) Semaphorin 3a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=50.50  E-value=37  Score=25.31  Aligned_cols=55  Identities=13%  Similarity=0.024  Sum_probs=33.5

Q ss_pred             cEEEEEccCCeEEE-EECCCCc-------eeeeeeccCCCCCeeEEEEecCCCEEEEEeCCcE
Q psy16005         71 FYIASGDISGKVRI-WDTVNKE-------HILKNEFHPIGGPIKDIAWSPDNQRMISIVENGA  125 (248)
Q Consensus        71 ~~l~~~~~dg~i~i-wd~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~  125 (248)
                      ..++.|..+|.|.- .-...+.       .+....+..+..+|..|.+++++++|+++++.++
T Consensus       422 tV~flGT~~G~l~Kv~~~~~~~~~~~~~~~iee~~~~~~~~pI~~l~l~~~~~~Lyv~t~~~V  484 (495)
T d1q47a_         422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV  484 (495)
T ss_dssp             EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred             EEEEEEcCCCEEEEEEEcCCCCccccceeEEEEEeecCCCCceEEEEEeCCCCEEEEEeCCeE
Confidence            35667888887763 3222111       1112223345678889999999888888887765


No 111
>d2nt0a1 b.71.1.2 (A:1-77,A:432-497) Glucosylceramidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.45  E-value=28  Score=20.95  Aligned_cols=50  Identities=10%  Similarity=0.135  Sum_probs=29.4

Q ss_pred             ccCCcEEEEe-CCCCCEEEEeC-----CcEEEEEecCCCceeeeeecCCcceEEEEEC
Q psy16005         16 QRGQPIVLGG-DPKGKNFLYTN-----GNSVIIRNIENPAISDIYTEHSCAVNVAKYS   67 (248)
Q Consensus        16 ~~~~v~~~~~-s~~~~~l~~~~-----~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s   67 (248)
                      ....+..++| +|||..++...     +-.+.|++...+.....+..  ..|..+.|.
T Consensus        86 ~~~~L~~vAF~nPDgs~vlVv~N~s~~~~~~~i~~~~~~~~~~~lpa--~Si~T~vw~  141 (143)
T d2nt0a1          86 QKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPG--YSIHTYLWH  141 (143)
T ss_dssp             SCCSEEEEEEECTTSCEEEEEEECSSSCEEEEEEETTTEEEEEEECT--TEEEEEEEC
T ss_pred             CcCcceEEEEECCCCCEEEEEEeCCCCCeEEEEEeCCCCEEEEEeCC--CEEEEEEEe
Confidence            4566778888 88988766642     33566666554444344433  345555554


No 112
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=45.40  E-value=6.4  Score=24.56  Aligned_cols=27  Identities=26%  Similarity=0.233  Sum_probs=19.9

Q ss_pred             cceEEEEECcCCcEEEEEccCCeEEEE
Q psy16005         59 CAVNVAKYSPSGFYIASGDISGKVRIW   85 (248)
Q Consensus        59 ~~v~~~~~s~~~~~l~~~~~dg~i~iw   85 (248)
                      +-+.+--|+.+|.++||+..+|.+++.
T Consensus       144 gl~~g~i~~~dG~LvAs~~QEgl~R~~  170 (171)
T d1c8ua2         144 GFVRGEFYTQDGVLVASTVQEGVMRNH  170 (171)
T ss_dssp             EEEEEEEEETTCCEEEEEEEEEEEEEC
T ss_pred             eEEEEEEECCCCCEEEEEEEEEEEEec
Confidence            345555678888888888888887764


No 113
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=43.10  E-value=7.2  Score=24.29  Aligned_cols=29  Identities=7%  Similarity=-0.028  Sum_probs=23.4

Q ss_pred             CcCeEEEEEcCCCcEEEEEcCCCeEEEEE
Q psy16005        215 LGPVTDCSFSPSNEYLVASDAHRKVVLYR  243 (248)
Q Consensus       215 ~~~v~~~~~s~~~~~l~~~~~d~~i~vw~  243 (248)
                      .+-+..--|+.+|.+++++..+|.+++-|
T Consensus       143 Rgl~~g~i~~~dG~LvAs~~QEgl~R~~~  171 (171)
T d1c8ua2         143 RGFVRGEFYTQDGVLVASTVQEGVMRNHN  171 (171)
T ss_dssp             EEEEEEEEEETTCCEEEEEEEEEEEEECC
T ss_pred             eeEEEEEEECCCCCEEEEEEEEEEEEecC
Confidence            34456667999999999999999998743


No 114
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=39.54  E-value=44  Score=21.54  Aligned_cols=97  Identities=9%  Similarity=0.008  Sum_probs=55.6

Q ss_pred             cEEEEeCCCCCEEEEeCCcEEEEEecCCCceee------ee-ecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCce
Q psy16005         20 PIVLGGDPKGKNFLYTNGNSVIIRNIENPAISD------IY-TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH   92 (248)
Q Consensus        20 v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~------~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~   92 (248)
                      ...+-|+|.|-+.++. ++.++--...+.+...      .+ ...=+.+..+-|.|+|.+-++-+ + .+.-+....+..
T Consensus        89 FkflffdP~G~LyaVt-~~~LYr~~pPtn~~q~W~g~a~~vG~~gw~df~~lFFdP~G~LYaV~~-~-~l~k~~pP~~~~  165 (235)
T d1tl2a_          89 FQFLFFDPNGYLYAVS-KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHG-Q-QFYKALPPVSNQ  165 (235)
T ss_dssp             CSEEEECTTSCEEEEE-TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEET-T-EEEEECCCSSTT
T ss_pred             eEEEEECCCceEEEec-CcceecCCcCcccchhhhhhhhhhccCCcCceeEEEECCCceEEEEEC-C-cEEEcCCCCCCC
Confidence            3457789999777776 4555554443333211      11 12234577899999998777733 3 466666543321


Q ss_pred             ---e-eeeec-cCCCCCeeEEEEecCCCEEEE
Q psy16005         93 ---I-LKNEF-HPIGGPIKDIAWSPDNQRMIS  119 (248)
Q Consensus        93 ---~-~~~~~-~~~~~~v~~~~~~~~~~~l~~  119 (248)
                         + ....+ .++-.....+.|+|+|+.-.+
T Consensus       166 d~WL~~st~igr~~w~~~~fi~Fs~dG~L~~v  197 (235)
T d1tl2a_         166 DNWLARATKIGQGGWDTFKFLFFSSVGTLFGV  197 (235)
T ss_dssp             CCHHHHCEEEESSSGGGEEEEEECTTSCEEEE
T ss_pred             chhhhhhhhhccCcccCceEEEECCCCcEEEE
Confidence               0 00112 244556678888888876655


No 115
>d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.08  E-value=33  Score=19.46  Aligned_cols=13  Identities=15%  Similarity=0.309  Sum_probs=5.7

Q ss_pred             CCCCEEEEeCCcE
Q psy16005         27 PKGKNFLYTNGNS   39 (248)
Q Consensus        27 ~~~~~l~~~~~~~   39 (248)
                      ++|+++...++|.
T Consensus        46 ~~gkyw~~~~dG~   58 (111)
T d1dfca4          46 STGKYWTVGSDSA   58 (111)
T ss_dssp             TTSCBCEECSSCB
T ss_pred             CCCCEEEEcCCCc
Confidence            3444444444443


No 116
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}
Probab=35.54  E-value=34  Score=19.18  Aligned_cols=57  Identities=4%  Similarity=0.113  Sum_probs=33.4

Q ss_pred             ceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCCCC
Q psy16005        176 SSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  248 (248)
Q Consensus       176 ~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~~~  248 (248)
                      ..+.+.++|.+++... ++.+ +|...+...         .....+.+.+||.+++.+.     .+|.-.|.+
T Consensus        53 ~~l~l~~dGnLvl~~~-~g~~-vW~s~t~~~---------~~~~~l~L~ddGNlvly~~-----~~W~S~t~~  109 (109)
T d1kj1a_          53 CKAVLQSDGNFVVYDA-EGRS-LWASHSVRG---------NGNYVLVLQEDGNVVIYGS-----DIWSTGTYK  109 (109)
T ss_dssp             CEEEECTTSCEEEECS-SSCE-EEECCCCCC---------SSCCEEEECTTSCEEEECC-----EEEECCCCC
T ss_pred             EEEEEcCCceEEEEeC-CCcE-EEEEeeECC---------CCCEEEEEeCCCcEEEECC-----CEecCCCcC
Confidence            4467777887655433 4433 575543211         1224567889999887642     378876653


No 117
>d1olza2 b.69.12.1 (A:3-480) Semaphorin 4d {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.65  E-value=65  Score=23.78  Aligned_cols=56  Identities=16%  Similarity=0.207  Sum_probs=35.7

Q ss_pred             EEEEEcCCCcEEE-EEcCCCCCC-Cc-ccccCCcCeEEEEEcCC--CcEEEEEcCCCeEEE
Q psy16005        186 LVAVGGADSKVHI-YELNNKSLS-PK-AELDHLGPVTDCSFSPS--NEYLVASDAHRKVVL  241 (248)
Q Consensus       186 ~l~~~~~d~~v~i-~d~~~~~~~-~~-~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~v  241 (248)
                      .+..|+.+|.|.- .-....... .. ....+..+|..+.++++  +.+|+.++.++.++|
T Consensus       415 V~flGT~~G~i~Kvv~~~~~~~~iee~~~~~~~~pV~~~~l~~~~~~~~LyV~t~~~V~kv  475 (478)
T d1olza2         415 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA  475 (478)
T ss_dssp             EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred             EEEEECCCceEEEEEEcCCCceEEEEEEecCCCCceeeEEeccCCCCcEEEEEcCCeEEEE
Confidence            6778888997654 333332211 11 12246778999999876  458888888877765


No 118
>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}
Probab=34.65  E-value=58  Score=21.51  Aligned_cols=211  Identities=11%  Similarity=0.006  Sum_probs=91.8

Q ss_pred             ccCCcEEEEeCCCCCEEEEeCCcEEEEEecCCCceeeeeecCCcceEEEEECcCCcEEEEEccCCeEEEEECCCCceeee
Q psy16005         16 QRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK   95 (248)
Q Consensus        16 ~~~~v~~~~~s~~~~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~   95 (248)
                      ....|..++-..  .+.++-.||.|+.|-.....++-.-......+..++.-. ...++.  .||.+..|......... 
T Consensus        24 ~~~~i~~va~G~--~h~~al~dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~-~~~~al--~dg~v~~wG~~~~gq~~-   97 (273)
T d1jtdb_          24 AQSGVDAIAGGY--FHGLALKGGKVLGWGANLNGQLTMPAATQSGVDAIAAGN-YHSLAL--KDGEVIAWGGNEDGQTT-   97 (273)
T ss_dssp             GSSSEEEEEECS--SEEEEEETTEEEEEECCTTSTTSCCGGGGSCCCEEEECS-SEEEEE--ETTEEEEEECCTTSTTC-
T ss_pred             CCCCcEEEEccC--CEEEEEECCEEEEEeCCCCCceeeeecccccceEEecCC-Cceeee--eeeeeeccCCCcceeec-
Confidence            345577776632  233333478999996554322221112233455554422 223333  47999999764332111 


Q ss_pred             eeccCCCCCeeEEEEecCCCEEEEEeCCcEEEEEccCCCCC-------ce-eEeCCCCCEEEEEcCCCeEEEEECC---c
Q psy16005         96 NEFHPIGGPIKDIAWSPDNQRMISIVENGAKVSSLPIDYEP-------SS-ISLDHEHGLVAVGGADSKISIVENG---A  164 (248)
Q Consensus        96 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~i~~~~~~---~  164 (248)
                      .... ....+..++-..  ...+...+..+..|........       .. .........++ ...++.++.|...   +
T Consensus        98 ~~~~-~~~~~~~i~~~~--~~~~~~~dg~v~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~g~~~~~G~~~~g~  173 (273)
T d1jtdb_          98 VPAE-ARSGVDAIAAGA--WASYALKDGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTAL-AVKNGGVIAWGDNYFGQ  173 (273)
T ss_dssp             CCGG-GGSSCCEEEEET--TEEEEEETTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEE-EEETTEEEEEECCTTST
T ss_pred             cccc-cccceeEEeeec--ccccccccccceecccCCCCceeeeccCCceEEEEeccceeee-eecccceeEeecccCCc
Confidence            0101 112344444332  2222233444555653221111       00 11111112222 2346777777622   2


Q ss_pred             eeeeecccCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCcccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEE
Q psy16005        165 KVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  243 (248)
Q Consensus       165 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~  243 (248)
                      ..........+..++....  +.+.- .||.|+-|=........... .....|..++-... ..++.  .||.|..|=
T Consensus       174 ~~~~~~~~~~v~~Is~G~~--h~~~l-~dG~v~~WG~n~~Gql~~~~-~~~~~v~~I~~G~~-~~~~l--~~g~v~~WG  245 (273)
T d1jtdb_         174 TTVPAEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPT-EALSGVSAIASGEW-YSLAL--KNGKVIAWG  245 (273)
T ss_dssp             TSCCGGGSSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCG-GGGSSCCEEEECSS-CEEEE--ETTEEEEES
T ss_pred             ccccccccCCccceeccce--eeEEE-ecCcEEEcCCCCCCccCCCc-cCCCCcEEEEeCcc-eEEEE--ECCEEEEEC
Confidence            2222223334555554322  22222 37889888654332222111 12344677765433 23333  378999883


No 119
>d1eeja2 d.17.3.1 (A:1-60) Disulfide bond isomerase, DsbC, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.44  E-value=21  Score=17.69  Aligned_cols=22  Identities=9%  Similarity=0.388  Sum_probs=13.0

Q ss_pred             EEEcCCCCEEEEEcCCCcEEEEEcCCCC
Q psy16005        178 ISLDHEHGLVAVGGADSKVHIYELNNKS  205 (248)
Q Consensus       178 ~~~s~~~~~l~~~~~d~~v~i~d~~~~~  205 (248)
                      +-.+.||++|+.|.      +||+.+++
T Consensus        37 ~Yvs~dG~y~i~G~------l~~l~~~~   58 (60)
T d1eeja2          37 LYITDDGKHIIQGP------MYDVSGTA   58 (60)
T ss_dssp             EEEETTSCEEEESC------EEECSSSS
T ss_pred             EEEcCCCCEEEEeE------EEEccCCC
Confidence            34466677777654      56665544


No 120
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}
Probab=30.74  E-value=42  Score=18.77  Aligned_cols=43  Identities=9%  Similarity=0.027  Sum_probs=23.6

Q ss_pred             eEEEEecCCCEEEEEeCCcEEEEEccCC--CCCceeEeCCCCCEEEE
Q psy16005        106 KDIAWSPDNQRMISIVENGAKVSSLPID--YEPSSISLDHEHGLVAV  150 (248)
Q Consensus       106 ~~~~~~~~~~~l~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~  150 (248)
                      ..+.+.++|.+++... + -.+|.-...  .....+.+..+|++++.
T Consensus        52 ~~l~l~~dGnLvl~~~-~-~~~w~s~t~~~~~~~~l~L~ddGNlvly   96 (112)
T d1xd5a_          52 CVLKMQNDGNLVIYSG-S-RAIWASNTNRQNGNYYLILQRDRNVVIY   96 (112)
T ss_dssp             EEEEECTTSCEEEEET-T-EEEEECCCCCSCCCCEEEECTTSCEEEE
T ss_pred             cEEEEeccccEEEEec-C-CeEEEEeeccCCCceEEEEcCCCCEEEE
Confidence            4578888998776643 3 334443222  22334555566665554


No 121
>d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]}
Probab=30.48  E-value=85  Score=22.19  Aligned_cols=119  Identities=6%  Similarity=-0.061  Sum_probs=0.0

Q ss_pred             ccccccccCCcEEEEeCC-CCCEEEEeC-CcEEEEEecCCCceeeee-------ecCCcceEEEEECc-CCcEEEEEccC
Q psy16005         10 ATLPRTQRGQPIVLGGDP-KGKNFLYTN-GNSVIIRNIENPAISDIY-------TEHSCAVNVAKYSP-SGFYIASGDIS   79 (248)
Q Consensus        10 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~-~~~v~v~~~~~~~~~~~~-------~~~~~~v~~~~~s~-~~~~l~~~~~d   79 (248)
                      ..+..+-.+.+.+|+++| +.++++++. .+-|+.-+ +.++.=..+       ......+.+++++| +.+.++.+..+
T Consensus         4 ~~~~~~~gg~~~~i~~~P~~~~~~ya~~~~gGv~~S~-dgG~tW~~~~~~~~~~~~~~~~~~~iavdp~np~~vy~~tg~   82 (427)
T d2ebsa1           4 KNVAIGGGGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGR   82 (427)
T ss_dssp             EECCCCBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECS
T ss_pred             eEcCCCCCCcEEEEEECCCCCCEEEEEecCCCEEEEE-CCCCceEECCCCCCCCCcccccEeEEEECCCCCCEEEEEecc


Q ss_pred             ----CeEEEEECCCCceeeeeeccCCC--------CCeeEEEEecCCCEEEEEeCCcEEEEE
Q psy16005         80 ----GKVRIWDTVNKEHILKNEFHPIG--------GPIKDIAWSPDNQRMISIVENGAKVSS  129 (248)
Q Consensus        80 ----g~i~iwd~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~~~~~i~~  129 (248)
                          ....+|.-..+............        .....+.++|.....+.++...--+|.
T Consensus        83 ~~~~~~~gi~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~i~v~P~~~~~v~~~~~~~gl~~  144 (427)
T d2ebsa1          83 YVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK  144 (427)
T ss_dssp             CTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEECTTCTTCEEEECSSSCEEE
T ss_pred             ccCCcCccEEEeCCCCccceeecCCcccCccccCccceeEEEECCCccCcccccccccceee


No 122
>d2f2ha1 b.150.1.1 (A:666-773) Putative glucosidase YicI, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.03  E-value=47  Score=18.76  Aligned_cols=40  Identities=5%  Similarity=0.029  Sum_probs=19.6

Q ss_pred             eEEEEECCCCceeeeeeccCCCCCeeEEEEecCCCEEEEE
Q psy16005         81 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMISI  120 (248)
Q Consensus        81 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  120 (248)
                      .+++|++..+.................+....+|+.|...
T Consensus        22 ~l~vy~l~dG~~~~~~V~~~~G~~~~tv~v~R~g~~I~v~   61 (108)
T d2f2ha1          22 AFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVT   61 (108)
T ss_dssp             EEEEECCCTTCEEEEEEECTTSCEEEEEEEEEETTEEEEE
T ss_pred             EEEEEecCCCCEEEEEEECCCCcEEEEEEEEEeCCEEEEE
Confidence            5888888877543222222222233344444556555443


No 123
>d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=20.71  E-value=1.2e+02  Score=20.54  Aligned_cols=102  Identities=13%  Similarity=0.097  Sum_probs=63.0

Q ss_pred             CCEEEEEcCCCeEEEEECCc-------eeeeecc--cCCCceEEEcCCCCEEEEEcCCCcEEEEEcCCCCCCCc------
Q psy16005        145 HGLVAVGGADSKISIVENGA-------KVSSLPI--DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK------  209 (248)
Q Consensus       145 ~~~~~~~~~~~~i~~~~~~~-------~~~~~~~--~~~~~~~~~s~~~~~l~~~~~d~~v~i~d~~~~~~~~~------  209 (248)
                      ..+++..+.+|.++-.+...       ....+..  ...+..+........++..+..|....++...-.....      
T Consensus       107 ~~~l~~~T~~G~iKr~~l~~f~~~~~~~~~a~kL~~~D~lv~v~~~~~~~~v~~~t~~G~~lrf~~~~v~~~gr~a~Gv~  186 (304)
T d1suua_         107 DAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVC  186 (304)
T ss_dssp             TCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEE
T ss_pred             cceEEEEEehhhhhhcccchhhccccccceeecccchhhccccccccccceeEeeccccceeeeccccccccCcccccee
Confidence            45677788888888765221       1122222  23344445555566777888899888888764332211      


Q ss_pred             -ccccCCcCeEEEEEcCCCcEEEEEcCCCeEEEEECCC
Q psy16005        210 -AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD  246 (248)
Q Consensus       210 -~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~vw~~~~  246 (248)
                       ....-...+..+...+++.+++..+.+|..+...+..
T Consensus       187 ~i~L~~~d~v~~~~~~~~~~~ll~iT~~G~gKr~~~~e  224 (304)
T d1suua_         187 GMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  224 (304)
T ss_dssp             CCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             eecccccccceeeeeccCCceEEEEecCCceEEccchh
Confidence             1112345667777777888899999999888776643


No 124
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Probab=20.70  E-value=64  Score=18.62  Aligned_cols=45  Identities=22%  Similarity=0.115  Sum_probs=29.1

Q ss_pred             cCCcceEEEEECcCCcEEEEE---------ccCCeEEEEECCCCceeeeeeccCCC
Q psy16005         56 EHSCAVNVAKYSPSGFYIASG---------DISGKVRIWDTVNKEHILKNEFHPIG  102 (248)
Q Consensus        56 ~~~~~v~~~~~s~~~~~l~~~---------~~dg~i~iwd~~~~~~~~~~~~~~~~  102 (248)
                      -|...|+.....-.|  +..-         -..-.|.||++.+|+....+.+.+..
T Consensus        10 iHra~VT~a~l~YeG--itID~~Ll~aa~i~p~E~V~V~N~~NG~Rf~TYvI~g~~   63 (121)
T g1uhe.1          10 IHRATITDANLNYIG--ITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKK   63 (121)
T ss_dssp             EEEEECCEEETTCCC--CEEEHHHHHHTTCCTTCEEEEEETTTCCEEEEECEEECS
T ss_pred             hcCcEEeccccceeE--EEECHHHHHHcCCCCCCEEEEEECCCCeEEEeEEEecCC
Confidence            466667777666666  2221         12357999999999887666665543


Done!