Query psy16008
Match_columns 236
No_of_seqs 183 out of 1315
Neff 5.7
Searched_HMMs 13730
Date Fri Aug 16 18:36:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16008.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16008hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1axha_ g.3.6.2 (A:) Atracotox 12.6 31 0.0022 19.6 0.8 9 74-82 14-22 (37)
2 d2yrka1 g.37.1.4 (A:8-55) Zinc 12.6 23 0.0016 21.7 0.2 9 68-76 7-15 (48)
3 d1g1pa_ g.3.6.1 (A:) Conotoxin 12.5 35 0.0025 18.6 1.0 14 74-87 17-30 (32)
4 d1wiia_ g.41.3.4 (A:) Hypothet 12.1 35 0.0025 23.2 1.1 11 68-78 24-34 (85)
5 d1kala_ g.3.3.1 (A:) Kalata B1 9.4 43 0.0031 17.8 0.6 8 72-79 21-28 (29)
6 d1bboa1 g.37.1.1 (A:1-28) Enha 7.7 53 0.0039 17.7 0.5 10 69-78 3-12 (28)
7 d1q90r_ f.23.12.1 (R:) ISP sub 7.4 1.6E+02 0.011 16.9 2.6 33 95-127 5-37 (39)
8 d1ps9a3 c.4.1.1 (A:331-465,A:6 7.3 47 0.0034 24.8 0.2 10 68-77 2-11 (179)
9 d1x4la1 g.39.1.3 (A:8-36) Four 6.5 63 0.0046 17.5 0.4 8 70-77 1-8 (29)
10 d2cuqa1 g.39.1.3 (A:43-74) Fou 6.4 60 0.0044 18.0 0.3 8 70-77 2-9 (32)
No 1
>d1axha_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=12.61 E-value=31 Score=19.64 Aligned_cols=9 Identities=44% Similarity=0.516 Sum_probs=6.8
Q ss_pred ccccCCCCC
Q psy16008 74 NTLACSGSR 82 (236)
Q Consensus 74 ~~~~~~~~~ 82 (236)
|..||+||-
T Consensus 14 ne~ccsgsc 22 (37)
T d1axha_ 14 NENCCSQSC 22 (37)
T ss_dssp GGGBSSSCE
T ss_pred ccccccccc
Confidence 578998873
No 2
>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.58 E-value=23 Score=21.70 Aligned_cols=9 Identities=44% Similarity=1.099 Sum_probs=7.1
Q ss_pred hhhhhcccc
Q psy16008 68 AECTFCNTL 76 (236)
Q Consensus 68 ~~~~~~~~~ 76 (236)
-||+.||..
T Consensus 7 ~eC~lC~vK 15 (48)
T d2yrka1 7 PECTLCGVK 15 (48)
T ss_dssp SCCTTTTCC
T ss_pred ccCccccee
Confidence 489999864
No 3
>d1g1pa_ g.3.6.1 (A:) Conotoxin {Conus ermineus, E VIa [TaxId: 55423]}
Probab=12.53 E-value=35 Score=18.59 Aligned_cols=14 Identities=43% Similarity=0.816 Sum_probs=10.8
Q ss_pred ccccCCCCCCCCcc
Q psy16008 74 NTLACSGSRSSPCL 87 (236)
Q Consensus 74 ~~~~~~~~~~~~~~ 87 (236)
|..||+|.-|.-|.
T Consensus 17 nglccsgacvgvca 30 (32)
T d1g1pa_ 17 NGLCCSGACVGVCA 30 (32)
T ss_dssp CCCBTTBCBSSBBC
T ss_pred CCccccCceeEEec
Confidence 77899998776663
No 4
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=12.13 E-value=35 Score=23.20 Aligned_cols=11 Identities=36% Similarity=0.851 Sum_probs=8.9
Q ss_pred hhhhhcccccC
Q psy16008 68 AECTFCNTLAC 78 (236)
Q Consensus 68 ~~~~~~~~~~~ 78 (236)
-+|.||||.-+
T Consensus 24 F~CPfCnh~~s 34 (85)
T d1wiia_ 24 FTCPFCNHEKS 34 (85)
T ss_dssp CCCTTTCCSSC
T ss_pred EcCCCCCCCCe
Confidence 68999998654
No 5
>d1kala_ g.3.3.1 (A:) Kalata B1 {African plant (Oldenlandia affinis) [TaxId: 60225]}
Probab=9.36 E-value=43 Score=17.83 Aligned_cols=8 Identities=50% Similarity=1.115 Sum_probs=6.3
Q ss_pred hcccccCC
Q psy16008 72 FCNTLACS 79 (236)
Q Consensus 72 ~~~~~~~~ 79 (236)
-||||-|.
T Consensus 21 tcntpgc~ 28 (29)
T d1kala_ 21 TCNTPGCT 28 (29)
T ss_dssp CCSCTTCB
T ss_pred ccCCCCcc
Confidence 59999883
No 6
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.75 E-value=53 Score=17.65 Aligned_cols=10 Identities=30% Similarity=0.451 Sum_probs=7.1
Q ss_pred hhhhcccccC
Q psy16008 69 ECTFCNTLAC 78 (236)
Q Consensus 69 ~~~~~~~~~~ 78 (236)
-|..|+..|=
T Consensus 3 vC~~Cg~~C~ 12 (28)
T d1bboa1 3 ICEECGIRAK 12 (28)
T ss_dssp BCTTTCCBCS
T ss_pred cccccCcccC
Confidence 3788888773
No 7
>d1q90r_ f.23.12.1 (R:) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=7.42 E-value=1.6e+02 Score=16.92 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=24.4
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy16008 95 ASVRRSSPMNVIFLGIFTLAESFLLGVISSRYN 127 (236)
Q Consensus 95 ~~~~~~~p~n~ilL~lfTl~~G~~l~~i~~~~~ 127 (236)
|+..|+.-.|+++++.-+...+-.+.+...++-
T Consensus 5 pDMgrR~~MNLll~G~~~~~~~g~l~py~~fFv 37 (39)
T d1q90r_ 5 PDMNKRNIMNLILAGGAGLPITTLALGYGAFFV 37 (39)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cchhHHHHHHHHHHhccchhhhhhccceeEEec
Confidence 455677778888888888877777777766653
No 8
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}
Probab=7.34 E-value=47 Score=24.80 Aligned_cols=10 Identities=30% Similarity=0.664 Sum_probs=8.3
Q ss_pred hhhhhccccc
Q psy16008 68 AECTFCNTLA 77 (236)
Q Consensus 68 ~~~~~~~~~~ 77 (236)
++|..||..|
T Consensus 2 r~Ci~C~~~C 11 (179)
T d1ps9a3 2 NTCIGCNQAC 11 (179)
T ss_dssp CCCCCCCTTT
T ss_pred ccccccHHHH
Confidence 5799999877
No 9
>d1x4la1 g.39.1.3 (A:8-36) Four and a half LIM domains protein 2, FHL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.53 E-value=63 Score=17.52 Aligned_cols=8 Identities=25% Similarity=0.679 Sum_probs=5.1
Q ss_pred hhhccccc
Q psy16008 70 CTFCNTLA 77 (236)
Q Consensus 70 ~~~~~~~~ 77 (236)
|+.|+.|-
T Consensus 1 C~~C~kPI 8 (29)
T d1x4la1 1 CAGCTNPI 8 (29)
T ss_dssp BTTTTBCC
T ss_pred CCccCCcc
Confidence 66777663
No 10
>d2cuqa1 g.39.1.3 (A:43-74) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.35 E-value=60 Score=17.99 Aligned_cols=8 Identities=50% Similarity=0.833 Sum_probs=5.6
Q ss_pred hhhccccc
Q psy16008 70 CTFCNTLA 77 (236)
Q Consensus 70 ~~~~~~~~ 77 (236)
||.|+++-
T Consensus 2 Ct~Ck~~L 9 (32)
T d2cuqa1 2 CTGCQTPL 9 (32)
T ss_dssp CSSSCCBC
T ss_pred ccccCccc
Confidence 77777654
Done!