RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16017
         (85 letters)



>d1mija_ a.4.1.1 (A:) Homeo-prospero domain of Prospero protein
          {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
          Length = 152

 Score = 22.4 bits (48), Expect = 9.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 59 LISGFSNVRELY 70
          L+  FSN RE Y
Sbjct: 44 LVKWFSNFREFY 55


>d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's
          yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 263

 Score = 22.5 bits (46), Expect = 9.3
 Identities = 5/28 (17%), Positives = 16/28 (57%), Gaps = 4/28 (14%)

Query: 27 IYNGTKSPAPVTEDSKPKLIFHCQLAHG 54
          ++N T +   ++++++  +I+     HG
Sbjct: 16 LFNKTLTFQEISQNTREAVIY----IHG 39


>d1tf4a2 b.2.2.2 (A:461-605) Endo/exocellulase:cellobiose E-4,
          C-terminal domain {Thermomonospora fusca [TaxId: 2021]}
          Length = 145

 Score = 22.4 bits (48), Expect = 9.9
 Identities = 6/27 (22%), Positives = 10/27 (37%)

Query: 16 DNNNVGEHKSKIYNGTKSPAPVTEDSK 42
                E K+ I N +  PA + +   
Sbjct: 12 PGTTFTEIKAMIRNQSGWPARMLDKGT 38


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.314    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0357    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 306,580
Number of extensions: 11608
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 3
Length of query: 85
Length of database: 2,407,596
Length adjustment: 50
Effective length of query: 35
Effective length of database: 1,721,096
Effective search space: 60238360
Effective search space used: 60238360
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.9 bits)