Query psy16019
Match_columns 121
No_of_seqs 105 out of 239
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 18:50:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ovr_B FBW7, F-BOX/WD repeat p 98.9 9E-08 3.1E-12 74.3 16.2 105 5-119 129-236 (445)
2 3mbr_X Glutamine cyclotransfer 98.9 4.7E-08 1.6E-12 73.9 13.6 107 4-120 73-188 (243)
3 1p22_A F-BOX/WD-repeat protein 98.9 1.2E-07 4.1E-12 73.7 15.4 108 5-119 183-293 (435)
4 3nok_A Glutaminyl cyclase; bet 98.9 8.6E-08 2.9E-12 73.5 14.2 107 4-120 104-219 (268)
5 1gxr_A ESG1, transducin-like e 98.9 4.7E-07 1.6E-11 66.2 17.6 106 3-118 193-303 (337)
6 2iwa_A Glutamine cyclotransfer 98.8 1.1E-07 3.8E-12 72.5 13.5 106 5-120 75-190 (266)
7 3nol_A Glutamine cyclotransfer 98.8 5.6E-08 1.9E-12 74.3 11.8 107 4-120 95-210 (262)
8 3odt_A Protein DOA1; ubiquitin 98.8 1.5E-07 5.1E-12 68.4 13.2 104 6-119 196-304 (313)
9 2ovr_B FBW7, F-BOX/WD repeat p 98.8 3.9E-07 1.3E-11 70.8 16.3 105 5-119 249-356 (445)
10 1p22_A F-BOX/WD-repeat protein 98.8 3.1E-07 1.1E-11 71.3 15.0 102 4-115 142-246 (435)
11 3v7d_B Cell division control p 98.7 8.2E-07 2.8E-11 68.9 16.5 105 4-118 279-388 (464)
12 3mmy_A MRNA export factor; mRN 98.7 5.4E-07 1.8E-11 66.5 14.8 107 5-119 54-168 (368)
13 1gxr_A ESG1, transducin-like e 98.7 2.7E-06 9.3E-11 62.1 18.1 109 3-119 107-222 (337)
14 3v7d_B Cell division control p 98.7 5.5E-07 1.9E-11 69.8 14.7 105 3-117 320-427 (464)
15 3jrp_A Fusion protein of prote 98.7 8.1E-07 2.8E-11 66.0 14.9 104 3-114 21-137 (379)
16 3f3f_A Nucleoporin SEH1; struc 98.7 8.3E-07 2.8E-11 64.4 14.5 115 3-117 21-149 (351)
17 4ery_A WD repeat-containing pr 98.7 3.8E-06 1.3E-10 61.9 17.5 106 3-118 75-187 (312)
18 4aez_A CDC20, WD repeat-contai 98.7 2.1E-06 7.3E-11 65.9 16.6 109 3-119 144-256 (401)
19 3nok_A Glutaminyl cyclase; bet 98.7 5.5E-07 1.9E-11 69.0 13.1 102 5-120 64-173 (268)
20 3ow8_A WD repeat-containing pr 98.7 2E-06 6.9E-11 64.8 16.0 107 3-119 174-287 (321)
21 3vl1_A 26S proteasome regulato 98.7 9.2E-07 3.1E-11 67.3 14.1 108 3-119 107-220 (420)
22 2aq5_A Coronin-1A; WD40 repeat 98.6 3.1E-06 1.1E-10 64.8 16.6 107 4-118 93-214 (402)
23 1sq9_A Antiviral protein SKI8; 98.6 2.1E-06 7.2E-11 64.7 15.3 103 7-119 199-330 (397)
24 3k26_A Polycomb protein EED; W 98.6 2.2E-06 7.4E-11 63.3 14.6 101 5-115 85-196 (366)
25 1vyh_C Platelet-activating fac 98.6 2E-06 7E-11 66.8 15.1 107 3-119 118-231 (410)
26 3gre_A Serine/threonine-protei 98.6 2.7E-06 9.3E-11 65.4 15.4 105 4-119 181-300 (437)
27 3k26_A Polycomb protein EED; W 98.6 4.6E-06 1.6E-10 61.5 16.0 107 4-118 33-154 (366)
28 4ery_A WD repeat-containing pr 98.6 5.2E-06 1.8E-10 61.2 16.0 107 3-119 33-146 (312)
29 3dsm_A Uncharacterized protein 98.6 2.8E-06 9.7E-11 64.4 15.0 106 5-120 53-170 (328)
30 1r5m_A SIR4-interacting protei 98.6 6E-06 2E-10 62.0 16.4 109 3-119 55-188 (425)
31 3dsm_A Uncharacterized protein 98.6 2.3E-06 8E-11 64.9 14.2 103 5-120 94-221 (328)
32 3mbr_X Glutamine cyclotransfer 98.6 4.3E-06 1.5E-10 63.1 15.4 102 6-120 31-142 (243)
33 1r5m_A SIR4-interacting protei 98.6 1.6E-06 5.5E-11 65.1 13.1 101 3-113 257-363 (425)
34 3ow8_A WD repeat-containing pr 98.6 7E-06 2.4E-10 61.9 16.6 107 3-119 132-245 (321)
35 3nol_A Glutamine cyclotransfer 98.6 1.8E-06 6.3E-11 65.9 13.3 103 5-120 52-164 (262)
36 4gqb_B Methylosome protein 50; 98.6 2.1E-06 7.2E-11 65.9 13.8 104 5-118 93-208 (344)
37 3odt_A Protein DOA1; ubiquitin 98.6 1E-05 3.4E-10 58.6 16.6 102 5-119 114-222 (313)
38 2ynn_A Coatomer subunit beta'; 98.6 5.9E-06 2E-10 61.3 15.7 107 2-118 22-136 (304)
39 1yfq_A Cell cycle arrest prote 98.5 5.2E-07 1.8E-11 66.6 9.7 100 4-111 22-131 (342)
40 3zwl_B Eukaryotic translation 98.5 7.3E-06 2.5E-10 60.3 15.8 107 4-119 186-312 (369)
41 3ei3_B DNA damage-binding prot 98.5 2.2E-06 7.5E-11 64.8 13.2 110 3-119 173-290 (383)
42 1l0q_A Surface layer protein; 98.5 7.9E-06 2.7E-10 61.6 16.1 105 3-120 167-284 (391)
43 3zwl_B Eukaryotic translation 98.5 1.9E-06 6.3E-11 63.6 12.3 101 2-113 41-153 (369)
44 3vu4_A KMHSV2; beta-propeller 98.5 1.1E-05 3.9E-10 61.4 16.8 111 6-119 71-235 (355)
45 2iwa_A Glutamine cyclotransfer 98.5 9.4E-06 3.2E-10 61.8 16.2 103 6-120 32-144 (266)
46 1got_B GT-beta; complex (GTP-b 98.5 1.1E-05 3.8E-10 60.8 16.5 107 3-119 194-309 (340)
47 1pgu_A Actin interacting prote 98.5 1.5E-05 5E-10 63.1 17.9 104 7-120 175-292 (615)
48 3ei3_B DNA damage-binding prot 98.5 1.1E-05 3.8E-10 60.9 16.5 103 6-119 87-201 (383)
49 3frx_A Guanine nucleotide-bind 98.5 1.5E-05 5.2E-10 59.6 17.1 107 3-119 75-193 (319)
50 1l0q_A Surface layer protein; 98.5 1.1E-05 3.8E-10 60.8 16.0 108 3-120 41-156 (391)
51 3frx_A Guanine nucleotide-bind 98.5 2.3E-05 7.7E-10 58.7 17.4 106 3-119 117-235 (319)
52 1got_B GT-beta; complex (GTP-b 98.5 2.1E-05 7.1E-10 59.2 17.1 111 3-119 65-181 (340)
53 4a11_B DNA excision repair pro 98.5 4.9E-06 1.7E-10 62.3 13.4 106 4-119 55-183 (408)
54 1k8k_C P40, ARP2/3 complex 41 98.5 8.7E-06 3E-10 60.4 14.6 103 3-113 18-129 (372)
55 1sq9_A Antiviral protein SKI8; 98.5 5.1E-06 1.8E-10 62.5 13.4 101 3-113 243-397 (397)
56 4aow_A Guanine nucleotide-bind 98.5 2.8E-06 9.6E-11 62.4 11.6 109 3-113 225-339 (340)
57 3bws_A Protein LP49; two-domai 98.5 1.1E-05 3.8E-10 61.6 15.3 106 3-119 263-398 (433)
58 4aez_A CDC20, WD repeat-contai 98.5 1.6E-05 5.6E-10 60.9 16.3 103 6-118 104-213 (401)
59 3q7m_A Lipoprotein YFGL, BAMB; 98.4 1.3E-05 4.6E-10 60.9 15.7 106 5-120 53-171 (376)
60 3i2n_A WD repeat-containing pr 98.4 7.5E-06 2.6E-10 60.3 13.8 106 3-112 178-292 (357)
61 2pm7_B Protein transport prote 98.4 8.9E-06 3.1E-10 60.2 14.2 106 2-112 18-133 (297)
62 3mmy_A MRNA export factor; mRN 98.4 1.1E-05 3.9E-10 59.3 14.4 99 3-114 96-202 (368)
63 3vl1_A 26S proteasome regulato 98.4 2.3E-05 7.9E-10 59.4 16.5 106 3-118 149-285 (420)
64 4aow_A Guanine nucleotide-bind 98.4 2.6E-05 8.9E-10 57.1 16.1 103 6-118 186-293 (340)
65 3i2n_A WD repeat-containing pr 98.4 3.4E-06 1.2E-10 62.2 11.2 107 3-118 127-250 (357)
66 2pbi_B Guanine nucleotide-bind 98.4 2.6E-05 8.8E-10 59.4 16.4 104 5-118 210-322 (354)
67 1xip_A Nucleoporin NUP159; bet 98.4 8.1E-06 2.8E-10 65.1 13.9 100 5-118 97-200 (388)
68 3gre_A Serine/threonine-protei 98.4 5.1E-06 1.7E-10 63.9 12.4 107 3-119 224-367 (437)
69 1yfq_A Cell cycle arrest prote 98.4 6.9E-06 2.3E-10 60.5 12.3 104 5-112 112-226 (342)
70 3lrv_A PRE-mRNA-splicing facto 98.4 3.2E-06 1.1E-10 63.6 10.7 106 4-116 138-249 (343)
71 3q7m_A Lipoprotein YFGL, BAMB; 98.4 2.5E-05 8.7E-10 59.3 15.8 106 5-120 239-346 (376)
72 1vyh_C Platelet-activating fac 98.4 2E-05 6.9E-10 61.1 15.5 106 4-119 245-377 (410)
73 1erj_A Transcriptional repress 98.4 2.7E-05 9.2E-10 59.9 16.0 105 3-118 133-245 (393)
74 2pbi_B Guanine nucleotide-bind 98.4 5.2E-05 1.8E-09 57.7 17.3 104 4-117 165-277 (354)
75 4g56_B MGC81050 protein; prote 98.4 9.7E-06 3.3E-10 61.9 13.1 107 3-119 149-266 (357)
76 1k8k_C P40, ARP2/3 complex 41 98.4 3.1E-05 1.1E-09 57.4 15.5 117 3-119 106-241 (372)
77 2ynn_A Coatomer subunit beta'; 98.4 3.8E-05 1.3E-09 56.9 15.9 106 5-120 153-268 (304)
78 4gqb_B Methylosome protein 50; 98.4 1.6E-05 5.4E-10 60.9 14.0 99 6-114 228-334 (344)
79 2vdu_B TRNA (guanine-N(7)-)-me 98.4 2E-05 7E-10 61.4 14.9 109 3-119 159-279 (450)
80 3hxj_A Pyrrolo-quinoline quino 98.3 4.9E-06 1.7E-10 61.4 10.7 101 5-118 107-210 (330)
81 3jro_A Fusion protein of prote 98.3 1.4E-05 4.9E-10 67.0 14.5 104 2-113 18-134 (753)
82 3vgz_A Uncharacterized protein 98.3 4.5E-05 1.5E-09 56.2 15.6 107 3-120 194-312 (353)
83 4gga_A P55CDC, cell division c 98.3 5.7E-05 1.9E-09 58.3 16.6 98 4-112 115-219 (420)
84 2aq5_A Coronin-1A; WD40 repeat 98.3 1.4E-05 4.8E-10 61.1 13.0 110 7-118 49-170 (402)
85 3mkq_A Coatomer beta'-subunit; 98.3 4E-05 1.4E-09 63.1 16.3 107 2-118 22-136 (814)
86 3jrp_A Fusion protein of prote 98.3 2.6E-05 9E-10 57.7 13.9 104 5-113 69-193 (379)
87 3dm0_A Maltose-binding peripla 98.3 3.9E-05 1.3E-09 63.1 16.2 105 5-119 531-640 (694)
88 4e54_B DNA damage-binding prot 98.3 1.2E-05 3.9E-10 62.6 12.3 101 5-113 132-242 (435)
89 4g56_B MGC81050 protein; prote 98.3 2.8E-05 9.4E-10 59.4 13.5 97 5-111 239-343 (357)
90 2ymu_A WD-40 repeat protein; u 98.3 8.5E-05 2.9E-09 58.7 16.7 105 3-119 395-505 (577)
91 4a11_B DNA excision repair pro 98.3 6.1E-05 2.1E-09 56.2 15.1 101 4-113 111-220 (408)
92 3dwl_C Actin-related protein 2 98.3 4E-06 1.4E-10 63.0 8.5 107 3-113 21-133 (377)
93 2pm9_A Protein WEB1, protein t 98.2 1.3E-05 4.6E-10 60.4 11.2 116 3-119 77-205 (416)
94 4e54_B DNA damage-binding prot 98.2 1.8E-05 6E-10 61.6 11.9 108 4-118 220-334 (435)
95 2pm9_A Protein WEB1, protein t 98.2 3.6E-05 1.2E-09 58.0 13.2 108 5-119 178-302 (416)
96 2vdu_B TRNA (guanine-N(7)-)-me 98.2 7.2E-05 2.5E-09 58.3 15.1 104 4-114 251-396 (450)
97 4ggc_A P55CDC, cell division c 98.2 0.0002 6.9E-09 51.8 16.6 97 5-112 36-139 (318)
98 2oaj_A Protein SNI1; WD40 repe 98.2 2.6E-05 8.8E-10 67.3 13.3 103 2-115 26-133 (902)
99 2xzm_R RACK1; ribosome, transl 98.2 0.00027 9.1E-09 53.1 17.5 105 4-119 87-210 (343)
100 3dm0_A Maltose-binding peripla 98.2 0.00011 3.7E-09 60.5 16.5 107 3-119 440-558 (694)
101 3hxj_A Pyrrolo-quinoline quino 98.2 1.9E-05 6.5E-10 58.1 10.9 101 5-119 187-291 (330)
102 3vgz_A Uncharacterized protein 98.2 9.5E-05 3.2E-09 54.5 14.6 110 3-119 50-181 (353)
103 1nir_A Nitrite reductase; hemo 98.2 8.2E-05 2.8E-09 60.7 15.5 102 8-120 152-266 (543)
104 3dw8_B Serine/threonine-protei 98.2 6.4E-05 2.2E-09 57.3 14.0 111 4-119 188-324 (447)
105 2ymu_A WD-40 repeat protein; u 98.2 0.00015 5E-09 57.3 16.4 100 2-112 25-130 (577)
106 3bws_A Protein LP49; two-domai 98.2 0.00017 6E-09 54.9 16.3 102 7-118 183-299 (433)
107 3v9f_A Two-component system se 98.2 4.2E-05 1.4E-09 64.2 13.8 104 5-116 373-483 (781)
108 3bg1_A Protein SEC13 homolog; 98.2 4.9E-05 1.7E-09 56.7 12.8 105 3-112 23-137 (316)
109 1pgu_A Actin interacting prote 98.2 8.7E-05 3E-09 58.6 14.8 83 28-118 438-526 (615)
110 2pm7_B Protein transport prote 98.2 0.00018 6.2E-09 53.0 15.7 104 5-113 67-191 (297)
111 3sfz_A APAF-1, apoptotic pepti 98.1 0.00014 4.9E-09 62.9 16.8 108 2-119 666-782 (1249)
112 3sfz_A APAF-1, apoptotic pepti 98.1 0.00011 3.9E-09 63.5 16.1 108 2-119 624-740 (1249)
113 3f3f_A Nucleoporin SEH1; struc 98.1 0.00012 4.2E-09 52.8 13.9 115 5-119 182-345 (351)
114 4a2l_A BT_4663, two-component 98.1 5.9E-05 2E-09 63.4 13.9 106 5-116 367-485 (795)
115 2hes_X YDR267CP; beta-propelle 98.1 0.00031 1E-08 52.6 16.3 103 7-110 26-137 (330)
116 3mkq_A Coatomer beta'-subunit; 98.1 0.00011 3.9E-09 60.4 14.9 110 3-119 107-225 (814)
117 3lrv_A PRE-mRNA-splicing facto 98.1 0.00012 4.1E-09 54.9 13.9 104 8-119 88-210 (343)
118 2oaj_A Protein SNI1; WD40 repe 98.1 6E-05 2E-09 65.0 13.5 102 7-119 71-190 (902)
119 1erj_A Transcriptional repress 98.1 0.00031 1.1E-08 53.9 16.2 100 3-112 175-288 (393)
120 1pby_B Quinohemoprotein amine 98.1 9.2E-05 3.1E-09 53.9 12.6 103 3-119 43-171 (337)
121 3iz6_a 40S ribosomal protein R 98.1 0.00018 6E-09 55.0 14.6 106 4-118 217-336 (380)
122 1qks_A Cytochrome CD1 nitrite 98.1 0.00015 5.2E-09 60.0 15.2 106 7-120 168-284 (567)
123 2j04_A TAU60, YPL007P, hypothe 98.1 0.00014 4.8E-09 61.0 15.0 111 2-115 138-258 (588)
124 3dwl_C Actin-related protein 2 98.1 2E-05 6.9E-10 59.1 9.0 111 3-114 110-239 (377)
125 4h5i_A Guanine nucleotide-exch 98.1 0.00025 8.5E-09 54.3 15.3 113 4-118 144-307 (365)
126 3fm0_A Protein CIAO1; WDR39,SG 98.1 0.00016 5.6E-09 54.5 14.1 107 3-114 71-184 (345)
127 4ggc_A P55CDC, cell division c 98.0 0.00061 2.1E-08 49.2 16.3 103 3-113 77-183 (318)
128 2xzm_R RACK1; ribosome, transl 98.0 0.00035 1.2E-08 52.4 15.3 101 3-111 128-244 (343)
129 3iz6_a 40S ribosomal protein R 98.0 0.00029 9.9E-09 53.8 14.7 106 6-119 171-288 (380)
130 1nir_A Nitrite reductase; hemo 98.0 5.1E-05 1.7E-09 61.9 10.9 110 6-119 382-522 (543)
131 3jro_A Fusion protein of prote 98.0 0.00011 3.7E-09 61.7 13.2 103 5-112 67-190 (753)
132 2xyi_A Probable histone-bindin 98.0 8.3E-05 2.8E-09 57.8 11.6 106 5-112 141-264 (430)
133 3fm0_A Protein CIAO1; WDR39,SG 98.0 0.00045 1.5E-08 52.0 15.4 105 3-113 26-138 (345)
134 1nr0_A Actin interacting prote 98.0 0.00062 2.1E-08 55.4 17.2 103 7-119 162-278 (611)
135 2oit_A Nucleoporin 214KDA; NH2 98.0 5.5E-05 1.9E-09 59.9 10.6 105 4-118 103-229 (434)
136 1pby_B Quinohemoprotein amine 98.0 0.00026 9.1E-09 51.5 13.4 104 7-120 3-133 (337)
137 3dw8_B Serine/threonine-protei 98.0 0.00021 7.3E-09 54.4 13.3 110 2-111 37-207 (447)
138 4gga_A P55CDC, cell division c 98.0 0.00069 2.4E-08 52.2 16.2 103 3-113 157-263 (420)
139 2xyi_A Probable histone-bindin 98.0 0.00088 3E-08 51.9 16.7 108 7-118 196-317 (430)
140 3v9f_A Two-component system se 98.0 0.00049 1.7E-08 57.7 16.2 101 5-116 76-197 (781)
141 3u4y_A Uncharacterized protein 97.9 0.00045 1.5E-08 50.7 14.2 111 3-119 93-218 (331)
142 1nr0_A Actin interacting prote 97.9 0.00018 6.1E-09 58.6 12.8 105 2-113 457-569 (611)
143 1jmx_B Amine dehydrogenase; ox 97.9 8.4E-05 2.9E-09 54.6 9.6 108 4-119 53-183 (349)
144 2z2n_A Virginiamycin B lyase; 97.9 0.00043 1.5E-08 49.7 13.2 100 5-115 193-299 (299)
145 4a2l_A BT_4663, two-component 97.9 0.00052 1.8E-08 57.6 15.4 102 5-116 183-296 (795)
146 3ott_A Two-component system se 97.9 0.00035 1.2E-08 58.4 14.2 102 4-115 72-178 (758)
147 3vu4_A KMHSV2; beta-propeller 97.9 0.00014 4.9E-09 55.2 10.7 103 2-116 28-134 (355)
148 2hes_X YDR267CP; beta-propelle 97.9 0.00035 1.2E-08 52.3 12.4 111 3-113 163-282 (330)
149 3ott_A Two-component system se 97.8 0.00055 1.9E-08 57.2 14.7 101 5-116 112-225 (758)
150 1jmx_B Amine dehydrogenase; ox 97.8 0.001 3.5E-08 48.7 13.7 100 5-114 10-137 (349)
151 1ri6_A Putative isomerase YBHE 97.8 0.00077 2.6E-08 49.1 12.6 109 2-116 46-166 (343)
152 3sjl_D Methylamine dehydrogena 97.7 0.00048 1.6E-08 54.9 11.9 105 5-120 237-372 (386)
153 3sjl_D Methylamine dehydrogena 97.7 0.0011 3.7E-08 52.8 13.8 106 3-120 42-178 (386)
154 3u4y_A Uncharacterized protein 97.7 0.0014 4.8E-08 48.0 13.5 107 5-120 9-126 (331)
155 3e5z_A Putative gluconolactona 97.7 0.00099 3.4E-08 48.7 12.4 106 3-118 181-293 (296)
156 2oiz_A Aromatic amine dehydrog 97.7 0.0016 5.6E-08 49.9 13.9 101 6-118 212-343 (361)
157 3c75_H MADH, methylamine dehyd 97.7 0.0012 4E-08 53.1 13.2 105 4-120 83-218 (426)
158 1qks_A Cytochrome CD1 nitrite 97.6 0.00059 2E-08 56.4 11.1 113 5-119 400-546 (567)
159 3g4e_A Regucalcin; six bladed 97.6 0.00089 3.1E-08 49.5 10.9 111 5-120 108-238 (297)
160 2z2n_A Virginiamycin B lyase; 97.6 0.0049 1.7E-07 44.0 14.6 100 4-115 24-132 (299)
161 2mad_H Methylamine dehydrogena 97.6 0.0033 1.1E-07 48.9 14.4 101 6-117 225-356 (373)
162 2j04_B YDR362CP, TAU91; beta p 97.6 0.0018 6.2E-08 52.7 13.2 104 6-118 278-393 (524)
163 2j04_B YDR362CP, TAU91; beta p 97.5 0.0013 4.3E-08 53.7 12.1 106 5-116 225-347 (524)
164 2dg1_A DRP35, lactonase; beta 97.5 0.0053 1.8E-07 45.2 14.6 103 6-116 56-176 (333)
165 1ri6_A Putative isomerase YBHE 97.5 0.00095 3.2E-08 48.6 10.2 109 5-118 4-125 (343)
166 2oit_A Nucleoporin 214KDA; NH2 97.5 0.003 1E-07 49.8 13.3 98 5-112 162-279 (434)
167 4h5i_A Guanine nucleotide-exch 97.5 0.0048 1.7E-07 47.0 14.0 99 4-110 230-342 (365)
168 1pjx_A Dfpase, DIISOPROPYLFLUO 97.5 0.0065 2.2E-07 44.0 13.9 100 4-116 27-166 (314)
169 3bg1_A Protein SEC13 homolog; 97.4 0.0028 9.6E-08 47.0 11.9 100 6-110 180-292 (316)
170 1q7f_A NHL, brain tumor CG1071 97.4 0.015 5E-07 41.9 15.3 102 5-118 40-157 (286)
171 2ad6_A Methanol dehydrogenase 97.4 0.0029 9.9E-08 52.1 12.4 108 5-120 62-194 (571)
172 3no2_A Uncharacterized protein 97.4 0.01 3.4E-07 44.0 14.3 108 2-120 2-116 (276)
173 1kb0_A Quinohemoprotein alcoho 97.4 0.002 6.8E-08 54.0 11.5 108 5-120 77-208 (677)
174 2j04_A TAU60, YPL007P, hypothe 97.4 0.017 6E-07 48.4 17.0 105 2-114 94-214 (588)
175 2be1_A Serine/threonine-protei 97.4 0.00017 5.7E-09 56.6 4.5 109 5-120 10-139 (339)
176 3scy_A Hypothetical bacterial 97.4 0.011 3.9E-07 44.0 14.5 109 3-116 220-344 (361)
177 1rwi_B Serine/threonine-protei 97.3 0.0039 1.3E-07 44.3 11.4 99 5-114 34-141 (270)
178 3c75_H MADH, methylamine dehyd 97.3 0.0032 1.1E-07 50.6 12.0 104 4-118 275-409 (426)
179 4gq1_A NUP37; propeller, trans 97.3 0.0051 1.7E-07 47.2 12.7 112 6-118 157-293 (393)
180 2ojh_A Uncharacterized protein 97.3 0.004 1.4E-07 43.8 11.2 95 12-115 19-123 (297)
181 2qc5_A Streptogramin B lactona 97.3 0.019 6.7E-07 40.9 15.0 100 4-115 29-137 (300)
182 1mda_H Methylamine dehydrogena 97.3 0.0011 3.8E-08 52.2 8.9 104 5-120 222-355 (368)
183 1q7f_A NHL, brain tumor CG1071 97.3 0.019 6.4E-07 41.3 15.0 103 4-118 87-200 (286)
184 2ghs_A AGR_C_1268P; regucalcin 97.3 0.01 3.4E-07 44.6 13.8 100 5-116 61-173 (326)
185 2mad_H Methylamine dehydrogena 97.3 0.01 3.5E-07 46.1 14.1 58 2-63 133-194 (373)
186 1kv9_A Type II quinohemoprotei 97.3 0.0046 1.6E-07 51.7 12.4 108 4-119 65-195 (668)
187 2hz6_A Endoplasmic reticulum t 97.2 0.00015 5.3E-09 56.0 3.0 106 4-119 8-119 (369)
188 2hqs_A Protein TOLB; TOLB, PAL 97.2 0.035 1.2E-06 43.0 16.3 104 3-116 188-305 (415)
189 1npe_A Nidogen, entactin; glyc 97.1 0.029 9.8E-07 40.4 14.3 106 5-120 133-247 (267)
190 2qc5_A Streptogramin B lactona 97.1 0.033 1.1E-06 39.7 14.4 101 4-116 71-180 (300)
191 3hfq_A Uncharacterized protein 97.1 0.023 7.8E-07 41.9 13.8 110 3-116 196-324 (347)
192 4gq1_A NUP37; propeller, trans 97.1 0.011 3.7E-07 45.3 12.2 103 7-117 103-224 (393)
193 2hz6_A Endoplasmic reticulum t 97.1 0.00027 9.4E-09 54.6 2.9 107 4-119 91-200 (369)
194 3fvz_A Peptidyl-glycine alpha- 97.1 0.04 1.4E-06 41.0 14.8 104 7-119 103-235 (329)
195 1yiq_A Quinohemoprotein alcoho 97.1 0.0071 2.4E-07 50.7 11.6 108 5-119 70-200 (689)
196 3no2_A Uncharacterized protein 97.0 0.014 4.8E-07 43.2 12.1 104 5-119 88-203 (276)
197 3e5z_A Putative gluconolactona 97.0 0.0042 1.4E-07 45.2 9.0 99 14-119 152-253 (296)
198 1rwi_B Serine/threonine-protei 97.0 0.017 5.8E-07 40.9 11.7 101 5-115 160-268 (270)
199 1xip_A Nucleoporin NUP159; bet 97.0 0.03 1E-06 44.4 14.1 105 2-116 46-160 (388)
200 2oiz_A Aromatic amine dehydrog 96.9 0.0067 2.3E-07 46.4 9.6 101 6-117 16-146 (361)
201 2ghs_A AGR_C_1268P; regucalcin 96.9 0.037 1.2E-06 41.4 13.5 109 5-119 144-267 (326)
202 3hfq_A Uncharacterized protein 96.8 0.036 1.2E-06 40.8 12.8 107 7-115 52-176 (347)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 96.8 0.035 1.2E-06 40.1 12.4 100 5-111 187-299 (314)
204 2ad6_A Methanol dehydrogenase 96.8 0.026 8.8E-07 46.4 12.7 113 5-119 115-289 (571)
205 1flg_A Protein (quinoprotein e 96.8 0.023 7.8E-07 46.9 12.2 106 5-118 68-200 (582)
206 2dg1_A DRP35, lactonase; beta 96.8 0.095 3.3E-06 38.3 14.5 109 5-119 145-270 (333)
207 2ojh_A Uncharacterized protein 96.7 0.078 2.7E-06 37.0 13.6 108 4-118 139-265 (297)
208 1kb0_A Quinohemoprotein alcoho 96.7 0.033 1.1E-06 46.6 13.0 112 5-120 128-301 (677)
209 1w6s_A Methanol dehydrogenase 96.7 0.021 7E-07 47.6 11.4 107 5-119 62-199 (599)
210 3g4e_A Regucalcin; six bladed 96.6 0.092 3.1E-06 38.5 13.5 100 5-115 25-142 (297)
211 2fp8_A Strictosidine synthase; 96.6 0.11 3.8E-06 38.4 13.9 104 4-116 29-179 (322)
212 2w18_A PALB2, fancn, partner a 96.5 0.15 5.1E-06 40.3 14.6 106 4-119 192-322 (356)
213 1yiq_A Quinohemoprotein alcoho 96.4 0.036 1.2E-06 46.5 11.4 109 5-119 121-292 (689)
214 1w6s_A Methanol dehydrogenase 96.4 0.057 2E-06 44.9 12.5 110 8-119 124-295 (599)
215 2fp8_A Strictosidine synthase; 96.4 0.096 3.3E-06 38.7 12.6 99 3-110 194-312 (322)
216 2hqs_A Protein TOLB; TOLB, PAL 96.4 0.24 8.1E-06 38.3 15.4 90 15-115 159-260 (415)
217 2ecf_A Dipeptidyl peptidase IV 96.3 0.055 1.9E-06 44.2 11.7 107 2-116 45-186 (741)
218 3dr2_A Exported gluconolactona 96.3 0.06 2.1E-06 39.5 10.9 97 14-119 168-274 (305)
219 3scy_A Hypothetical bacterial 96.3 0.21 7.1E-06 36.9 15.2 106 3-110 59-185 (361)
220 1kv9_A Type II quinohemoprotei 96.3 0.065 2.2E-06 44.7 12.0 110 5-120 117-288 (668)
221 2ece_A 462AA long hypothetical 96.2 0.058 2E-06 44.0 11.0 101 14-119 227-363 (462)
222 1mda_H Methylamine dehydrogena 96.1 0.034 1.2E-06 43.6 8.9 64 45-120 30-114 (368)
223 3b7f_A Glycosyl hydrolase, BNR 95.9 0.17 5.8E-06 38.8 12.2 99 5-108 22-144 (394)
224 2w18_A PALB2, fancn, partner a 95.7 0.23 7.8E-06 39.2 12.1 91 9-109 254-355 (356)
225 2z3z_A Dipeptidyl aminopeptida 95.7 0.11 3.8E-06 42.2 10.6 72 37-116 82-160 (706)
226 1flg_A Protein (quinoprotein e 95.7 0.017 5.7E-07 47.7 5.7 52 3-56 495-549 (582)
227 3dr2_A Exported gluconolactona 94.8 0.067 2.3E-06 39.3 6.3 52 5-60 249-302 (305)
228 1jof_A Carboxy-CIS,CIS-muconat 94.8 0.36 1.2E-05 36.2 10.5 106 3-115 49-181 (365)
229 1xfd_A DIP, dipeptidyl aminope 94.8 0.13 4.6E-06 41.6 8.6 100 8-117 30-149 (723)
230 1z68_A Fibroblast activation p 94.8 0.16 5.4E-06 41.4 8.9 96 7-115 28-143 (719)
231 3fvz_A Peptidyl-glycine alpha- 94.7 0.92 3.1E-05 33.5 16.6 104 5-118 154-284 (329)
232 2z3z_A Dipeptidyl aminopeptida 94.6 0.36 1.2E-05 39.2 10.5 57 6-65 93-150 (706)
233 3amr_A 3-phytase; beta-propell 94.6 1.3 4.5E-05 34.8 17.1 111 7-120 145-273 (355)
234 2ecf_A Dipeptidyl peptidase IV 94.3 0.76 2.6E-05 37.3 11.9 60 3-63 118-179 (741)
235 3ei3_A DNA damage-binding prot 94.1 1.3 4.3E-05 39.7 13.7 77 5-87 571-655 (1158)
236 3hrp_A Uncharacterized protein 94.0 1.2 4.2E-05 34.5 12.2 102 4-111 181-298 (409)
237 1k32_A Tricorn protease; prote 93.5 1.4 5E-05 37.9 12.6 98 6-114 349-464 (1045)
238 3b7f_A Glycosyl hydrolase, BNR 93.4 0.51 1.7E-05 36.0 8.9 103 5-108 128-259 (394)
239 3ei3_A DNA damage-binding prot 93.3 0.77 2.6E-05 41.1 11.0 90 15-112 807-914 (1158)
240 4a5s_A Dipeptidyl peptidase 4 92.9 1 3.5E-05 37.2 10.5 48 69-116 97-146 (740)
241 1jof_A Carboxy-CIS,CIS-muconat 91.8 3.1 0.0001 30.9 15.4 113 3-116 154-297 (365)
242 1z68_A Fibroblast activation p 91.5 0.8 2.7E-05 37.2 8.2 60 2-63 68-137 (719)
243 2qe8_A Uncharacterized protein 91.0 3.7 0.00013 30.4 12.8 74 37-120 17-111 (343)
244 1k32_A Tricorn protease; prote 90.7 5.3 0.00018 34.3 12.9 90 2-101 387-491 (1045)
245 2ece_A 462AA long hypothetical 90.6 4.5 0.00015 32.9 11.6 109 4-120 94-246 (462)
246 2be1_A Serine/threonine-protei 90.5 0.5 1.7E-05 36.8 5.8 68 46-119 10-84 (339)
247 1fwx_A Nitrous oxide reductase 90.5 0.44 1.5E-05 40.0 5.7 86 8-120 18-130 (595)
248 3hrp_A Uncharacterized protein 90.4 5.1 0.00017 30.9 14.8 104 5-116 230-359 (409)
249 2xbg_A YCF48-like protein; pho 89.2 5.4 0.00018 29.6 11.8 98 4-109 214-320 (327)
250 3o4h_A Acylamino-acid-releasin 89.1 7.1 0.00024 30.8 14.0 97 7-115 124-231 (582)
251 3azo_A Aminopeptidase; POP fam 88.8 7.8 0.00027 30.9 12.5 102 6-116 254-374 (662)
252 2p4o_A Hypothetical protein; p 87.1 7 0.00024 28.4 12.0 82 28-118 23-111 (306)
253 1n7d_A LDL receptor, low-densi 86.0 2.8 9.6E-05 35.1 7.8 107 5-119 507-622 (699)
254 3amr_A 3-phytase; beta-propell 85.8 5.1 0.00017 31.4 8.8 62 3-64 189-262 (355)
255 2vpj_A Kelch-like protein 12; 85.8 7.8 0.00027 27.7 12.3 92 15-115 175-282 (301)
256 3p5b_L Low density lipoprotein 85.7 10 0.00036 29.1 10.8 98 14-119 224-328 (400)
257 3sov_A LRP-6, low-density lipo 85.7 9.3 0.00032 28.5 11.5 105 5-119 133-246 (318)
258 1xfd_A DIP, dipeptidyl aminope 85.4 2.6 9E-05 34.0 7.2 61 2-62 69-140 (723)
259 3f7f_A Nucleoporin NUP120; nuc 83.8 7.8 0.00027 33.3 9.6 81 38-119 163-258 (729)
260 1q47_A Semaphorin 3A; beta pro 83.7 5.2 0.00018 32.5 8.3 62 48-109 423-489 (495)
261 3ii7_A Kelch-like protein 7; p 83.2 11 0.00036 27.1 11.5 92 15-115 169-276 (306)
262 1npe_A Nidogen, entactin; glyc 82.5 11 0.00036 26.6 14.6 103 5-116 90-203 (267)
263 3kya_A Putative phosphatase; s 82.3 19 0.00064 29.3 11.9 99 6-110 152-277 (496)
264 3v64_C Agrin; beta propeller, 81.9 14 0.00049 27.7 12.2 107 5-119 170-283 (349)
265 1fwx_A Nitrous oxide reductase 81.7 10 0.00036 31.7 9.5 69 43-120 98-193 (595)
266 3o4h_A Acylamino-acid-releasin 81.1 12 0.00042 29.4 9.4 54 5-61 161-223 (582)
267 2qe8_A Uncharacterized protein 80.8 9.4 0.00032 28.2 8.2 58 6-65 78-154 (343)
268 1ijq_A LDL receptor, low-densi 80.4 15 0.00051 27.0 13.4 107 5-119 131-246 (316)
269 4gz8_A Semaphorin-3A; multi-do 80.0 5.3 0.00018 33.8 7.2 55 6-60 430-495 (667)
270 1zgk_A Kelch-like ECH-associat 79.0 16 0.00054 26.4 12.3 93 15-116 184-292 (308)
271 3qqz_A Putative uncharacterize 78.8 17 0.00059 26.7 11.0 99 4-108 37-150 (255)
272 3v65_B Low-density lipoprotein 78.6 20 0.00067 27.3 12.9 107 5-119 213-326 (386)
273 2gop_A Trilobed protease; beta 77.7 17 0.00057 26.0 9.5 17 102-118 152-168 (347)
274 2woz_A Kelch repeat and BTB do 76.9 18 0.00063 26.1 10.4 93 15-116 175-292 (318)
275 2woz_A Kelch repeat and BTB do 76.8 19 0.00063 26.1 11.8 89 16-115 128-235 (318)
276 1olz_A Semaphorin 4D; developm 76.5 7.3 0.00025 32.8 7.0 53 7-60 417-477 (663)
277 1q47_A Semaphorin 3A; beta pro 75.1 7.7 0.00026 31.5 6.6 54 7-60 423-487 (495)
278 2xn4_A Kelch-like protein 2; s 74.8 20 0.00069 25.5 12.7 92 15-115 173-280 (302)
279 3oky_B Putative uncharacterize 74.7 13 0.00044 31.0 7.9 56 6-61 421-496 (565)
280 2g8s_A Glucose/sorbosone dehyd 74.6 25 0.00085 26.4 11.4 106 5-111 28-173 (353)
281 4hw6_A Hypothetical protein, I 74.2 29 0.00099 27.0 13.4 100 5-114 152-262 (433)
282 3sre_A PON1, serum paraoxonase 73.6 6.3 0.00022 30.5 5.6 88 14-110 202-297 (355)
283 2vpj_A Kelch-like protein 12; 72.3 23 0.0008 25.1 14.0 92 15-115 128-235 (301)
284 3ii7_A Kelch-like protein 7; p 71.5 25 0.00085 25.1 12.8 91 16-115 119-229 (306)
285 2bkl_A Prolyl endopeptidase; m 71.4 39 0.0013 27.4 13.9 101 5-111 238-351 (695)
286 2ism_A Putative oxidoreductase 71.4 30 0.001 25.9 11.5 102 5-111 41-178 (352)
287 3s94_A LRP-6, low-density lipo 70.5 38 0.0013 27.8 9.9 105 5-117 138-249 (619)
288 4a0p_A LRP6, LRP-6, low-densit 70.4 44 0.0015 27.5 11.1 95 14-118 145-244 (628)
289 2p4o_A Hypothetical protein; p 70.2 27 0.00094 25.1 14.6 97 6-112 43-148 (306)
290 3nvq_A Semaphorin-7A; beta-pro 70.1 14 0.00048 30.9 7.2 55 6-60 381-444 (590)
291 4fww_A Macrophage-stimulating 69.7 7.7 0.00026 31.4 5.5 54 7-60 420-479 (527)
292 3pe7_A Oligogalacturonate lyas 68.7 30 0.001 25.0 12.9 33 3-37 90-122 (388)
293 4gz8_A Semaphorin-3A; multi-do 68.2 19 0.00065 30.5 7.7 63 48-110 431-498 (667)
294 4asc_A Kelch repeat and BTB do 67.8 31 0.0011 24.8 10.7 93 15-116 165-282 (315)
295 2xn4_A Kelch-like protein 2; s 67.7 30 0.001 24.6 12.9 92 16-115 125-233 (302)
296 2uvk_A YJHT; unknown function, 67.3 34 0.0012 25.0 12.3 89 5-101 19-126 (357)
297 3al9_A Plexin-A2; beta-propell 66.2 9.4 0.00032 31.3 5.3 55 6-60 414-476 (539)
298 3a9g_A Putative uncharacterize 66.1 40 0.0014 25.4 9.9 104 5-111 39-178 (354)
299 1cru_A Protein (soluble quinop 64.8 49 0.0017 26.0 9.2 94 5-101 37-162 (454)
300 1zgk_A Kelch-like ECH-associat 64.4 37 0.0013 24.4 12.7 93 15-115 90-197 (308)
301 2uzx_B Hepatocyte growth facto 64.3 14 0.00048 31.4 6.2 34 84-117 29-62 (727)
302 3tc9_A Hypothetical hydrolase; 63.6 49 0.0017 25.5 13.8 101 5-115 149-261 (430)
303 2cn3_A Xyloglucanase, beta-1,4 63.5 64 0.0022 26.8 10.8 96 5-105 35-158 (737)
304 4asc_A Kelch repeat and BTB do 63.1 39 0.0013 24.2 11.6 92 15-115 117-225 (315)
305 3m0c_C LDL receptor, low-densi 63.0 71 0.0024 27.2 14.3 96 15-118 537-639 (791)
306 3q6k_A 43.2 kDa salivary prote 61.9 26 0.00088 27.5 6.9 57 16-72 124-197 (381)
307 4fww_A Macrophage-stimulating 61.0 39 0.0013 27.2 8.1 61 48-109 420-481 (527)
308 3c5m_A Oligogalacturonate lyas 61.0 43 0.0015 24.0 11.4 94 13-116 166-278 (396)
309 1sqj_A OXG-RCBH, oligoxylogluc 60.5 76 0.0026 26.7 10.6 96 5-105 27-146 (789)
310 2xdw_A Prolyl endopeptidase; a 59.3 70 0.0024 25.9 16.0 111 5-119 244-376 (710)
311 3mvd_K Regulator of chromosome 58.4 59 0.002 24.7 8.8 61 8-68 306-377 (423)
312 3ol2_B Plexin-B1; beta-propell 58.0 18 0.00063 29.7 5.6 39 79-118 12-52 (528)
313 2xbg_A YCF48-like protein; pho 57.3 54 0.0019 24.0 9.4 60 37-101 36-97 (327)
314 3qhy_B Beta-lactamase inhibito 57.0 54 0.0018 23.9 10.8 58 6-68 74-132 (282)
315 3ol2_B Plexin-B1; beta-propell 56.9 51 0.0018 27.0 8.1 60 48-110 402-464 (528)
316 2xdw_A Prolyl endopeptidase; a 56.4 78 0.0027 25.6 14.2 103 5-113 297-416 (710)
317 3nvq_A Semaphorin-7A; beta-pro 55.5 67 0.0023 26.8 8.7 62 48-110 382-447 (590)
318 3tc9_A Hypothetical hydrolase; 54.6 72 0.0024 24.6 11.4 98 4-110 189-300 (430)
319 3oky_A Plexin-A2; transmembran 53.8 24 0.00083 29.9 5.8 36 82-118 15-52 (681)
320 2uvk_A YJHT; unknown function, 53.7 61 0.0021 23.5 11.3 95 15-115 168-298 (357)
321 2xzh_A Clathrin heavy chain 1; 53.6 80 0.0027 24.9 8.8 41 3-46 76-116 (365)
322 2p9w_A MAL S 1 allergenic prot 53.4 75 0.0026 24.5 9.6 73 40-118 16-119 (334)
323 4a5s_A Dipeptidyl peptidase 4 52.6 94 0.0032 25.3 10.5 60 2-63 70-139 (740)
324 1k3i_A Galactose oxidase precu 51.6 95 0.0032 25.1 10.6 63 45-115 252-327 (656)
325 1yr2_A Prolyl oligopeptidase; 50.5 1E+02 0.0035 25.2 11.9 106 4-115 326-445 (741)
326 3iuj_A Prolyl endopeptidase; h 49.2 1.1E+02 0.0036 25.0 12.9 104 5-115 291-409 (693)
327 3oky_A Plexin-A2; transmembran 48.9 58 0.002 27.6 7.4 62 48-110 414-478 (681)
328 3kci_A Probable E3 ubiquitin-p 48.1 87 0.003 23.6 7.9 58 11-68 280-348 (389)
329 2bkl_A Prolyl endopeptidase; m 47.7 1.1E+02 0.0037 24.7 12.5 103 8-115 284-401 (695)
330 3al9_A Plexin-A2; beta-propell 47.2 54 0.0018 26.8 6.8 34 84-118 18-53 (539)
331 3pe7_A Oligogalacturonate lyas 46.9 77 0.0026 22.7 12.7 32 85-116 239-278 (388)
332 3sov_A LRP-6, low-density lipo 44.1 93 0.0032 22.9 11.2 98 8-113 94-199 (318)
333 3pbp_A Nucleoporin NUP82; beta 43.6 1.3E+02 0.0044 24.3 8.6 59 48-109 314-386 (452)
334 3c5m_A Oligogalacturonate lyas 43.3 88 0.003 22.3 10.4 26 90-115 359-388 (396)
335 4a0p_A LRP6, LRP-6, low-densit 38.3 1.6E+02 0.0056 24.0 11.7 95 16-118 457-556 (628)
336 1bpo_A Protein (clathrin); cla 37.4 1.4E+02 0.0049 24.4 7.7 40 3-45 75-114 (494)
337 3nvn_B Plexin-C1; beta-propell 37.2 65 0.0022 26.3 5.7 56 6-61 354-417 (476)
338 1olz_A Semaphorin 4D; developm 37.0 1.1E+02 0.0037 25.7 7.2 57 48-110 417-480 (663)
339 3oky_B Putative uncharacterize 36.5 1.7E+02 0.0059 24.2 8.2 62 48-110 422-498 (565)
340 3azo_A Aminopeptidase; POP fam 35.5 1.6E+02 0.0055 23.1 14.8 106 3-114 197-328 (662)
341 1ijq_A LDL receptor, low-densi 34.0 1.3E+02 0.0045 21.7 16.3 100 6-114 89-198 (316)
342 1n7d_A LDL receptor, low-densi 33.7 92 0.0032 25.8 6.3 95 9-113 469-573 (699)
343 3nvx_A Protein A39; beta-prope 33.6 1.2E+02 0.0042 23.9 6.6 41 7-52 333-373 (383)
344 3sbq_A Nitrous-oxide reductase 33.3 80 0.0027 26.7 5.7 86 8-120 73-171 (638)
345 1yr2_A Prolyl oligopeptidase; 29.6 2.3E+02 0.0078 23.0 15.0 91 16-111 295-395 (741)
346 3of7_A Regulator of chromosome 29.1 2E+02 0.0069 22.3 10.5 59 10-68 327-408 (473)
347 3sre_A PON1, serum paraoxonase 27.5 2E+02 0.007 21.9 8.5 60 5-65 60-148 (355)
348 2wg3_C Hedgehog-interacting pr 26.8 2.3E+02 0.008 22.3 10.6 94 7-102 28-158 (463)
349 2hc5_A ORF 99, hypothetical pr 26.4 44 0.0015 21.9 2.5 17 103-119 70-86 (117)
350 2p9w_A MAL S 1 allergenic prot 25.1 2.3E+02 0.008 21.7 6.9 65 4-71 195-268 (334)
351 2gop_A Trilobed protease; beta 25.1 1.8E+02 0.0061 20.4 13.1 27 16-45 86-112 (347)
352 1zvt_A Topoisomerase IV subuni 24.3 2E+02 0.0069 20.7 6.4 60 5-64 95-162 (256)
353 4gq2_M Nucleoporin NUP120; bet 24.3 3.5E+02 0.012 23.4 10.8 74 46-119 181-274 (950)
354 2b4w_A Hypothetical protein, c 23.8 54 0.0018 25.3 2.8 22 46-67 133-154 (315)
355 3m0c_C LDL receptor, low-densi 23.1 3.5E+02 0.012 23.0 16.4 103 6-116 484-594 (791)
356 4h3o_A Lectin; cadmium, plant 22.5 1.4E+02 0.0049 18.3 5.2 10 12-21 26-35 (105)
357 2dk7_A Transcription elongatio 22.1 50 0.0017 20.1 1.9 20 10-31 25-44 (73)
358 3s25_A Hypothetical 7-bladed b 22.0 2.4E+02 0.0081 20.6 13.9 92 14-117 87-182 (302)
359 3q6k_A 43.2 kDa salivary prote 21.5 75 0.0026 24.8 3.4 83 38-120 27-143 (381)
360 3hx6_A Type 4 fimbrial biogene 21.0 58 0.002 27.1 2.7 21 4-24 84-104 (570)
361 4d9s_A UVB-resistance protein 21.0 2.7E+02 0.0093 21.0 9.2 61 8-68 289-360 (406)
362 2x8n_A CV0863; non-uniform sam 20.0 1.6E+02 0.0054 18.9 4.2 27 38-64 26-54 (111)
No 1
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.91 E-value=9e-08 Score=74.34 Aligned_cols=105 Identities=17% Similarity=0.234 Sum_probs=84.7
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-EeCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLP 82 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~lg~~ 82 (121)
.+.+..|+.||.|.+|+..+ .+++.+++ +.++|.++.+.++.+++|..||+|.+| |+++.+.+ .+...
T Consensus 129 g~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vw--------d~~~~~~~~~~~~h 198 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVW--------NAETGECIHTLYGH 198 (445)
T ss_dssp TTEEEEEETTSCEEEEETTT--CCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEE--------ETTTTEEEEEECCC
T ss_pred CCEEEEEECCCcEEEEECCC--CcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEE--------ECCcCcEEEEECCC
Confidence 56788999999999999887 46667765 458999999999999999999999998 44444332 34334
Q ss_pred CCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 83 HHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 83 ~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
..+|+|+...++.+..|+. +.|.+.|..+.+..+.+.
T Consensus 199 ~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~ 236 (445)
T 2ovr_B 199 TSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLM 236 (445)
T ss_dssp SSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEE
T ss_pred CCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEc
Confidence 5899999999999888887 589999999988877764
No 2
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.90 E-value=4.7e-08 Score=73.95 Aligned_cols=107 Identities=10% Similarity=0.073 Sum_probs=86.1
Q ss_pred CCCeEEEEe-cCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCc---eEEEe
Q psy16019 4 VLPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKY---HTVTL 79 (121)
Q Consensus 4 ~~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~---~~i~l 79 (121)
..+.+|+.| +++.+++|+..+ .+.+.+++.+..=..+.+.++++|++-.++.|.++ |.+.. +.|++
T Consensus 73 ~~~~ly~ltw~~~~v~v~D~~t--l~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~i--------Dp~t~~~~~~I~V 142 (243)
T 3mbr_X 73 WRDRLIQLTWRNHEGFVYDLAT--LTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKL--------DPDTLQQVGSIKV 142 (243)
T ss_dssp ETTEEEEEESSSSEEEEEETTT--TEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEE--------CTTTCCEEEEEEC
T ss_pred eCCEEEEEEeeCCEEEEEECCc--CcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEE--------eCCCCeEEEEEEE
Confidence 357899998 689999999988 67888998875334677888899999999999998 55555 44777
Q ss_pred CCCCCcee---EeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 80 GLPHHSVR---SLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 80 g~~~~pV~---~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
++...|++ -|..++++||+.+. |.|.+||++|+++...+.+
T Consensus 143 ~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEEC
T ss_pred ccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEEC
Confidence 65445554 56777999999984 8999999999999998874
No 3
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.86 E-value=1.2e-07 Score=73.71 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=76.4
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceE-EEeCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHT-VTLGLP 82 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~lg~~ 82 (121)
...+..|+.||.|.+|+..+ .+++.++.. .++|.++.+.++.+++|..||+|.+|+..... .... -.+...
T Consensus 183 ~~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~-----~~~~~~~~~~~ 255 (435)
T 1p22_A 183 ERVIITGSSDSTVRVWDVNT--GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT-----DITLRRVLVGH 255 (435)
T ss_dssp SSEEEEEETTSCEEEEESSS--CCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSS-----CCEEEEEECCC
T ss_pred CCEEEEEcCCCeEEEEECCC--CcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCC-----CceeeeEecCC
Confidence 45677888888888888776 355666643 46888888888888888888888887543221 1111 122222
Q ss_pred CCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 83 HHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 83 ~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
..+|.++...++.+..|+. +.|.+.|..+.+..+.++
T Consensus 256 ~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 256 RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp SSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEc
Confidence 4788898888888888887 579999999988887765
No 4
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.86 E-value=8.6e-08 Score=73.52 Aligned_cols=107 Identities=11% Similarity=0.177 Sum_probs=85.4
Q ss_pred CCCeEEEEe-cCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceE---EEe
Q psy16019 4 VLPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHT---VTL 79 (121)
Q Consensus 4 ~~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~---i~l 79 (121)
..+.+|+.+ +++.+++|+..+ .+.+.+++.+..=..+.+.+.++|++-.++.|.++ |.+..+. |.+
T Consensus 104 ~g~~Ly~ltw~~~~v~V~D~~T--l~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~i--------Dp~T~~v~~~I~V 173 (268)
T 3nok_A 104 DGERLYQLTWTEGLLFTWSGMP--PQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFH--------EPDGFALVGAVQV 173 (268)
T ss_dssp CSSCEEEEESSSCEEEEEETTT--TEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEE--------CTTTCCEEEEEEC
T ss_pred eCCEEEEEEccCCEEEEEECCc--CcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEE--------cCCCCeEEEEEEe
Confidence 467899998 689999999988 67888898874334566889999999999999998 5555544 677
Q ss_pred CCCCCce---eEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 80 GLPHHSV---RSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 80 g~~~~pV---~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
+....|+ .-|..++++||+++- |.|.+||++|+++..++.+
T Consensus 174 ~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 174 KLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred CCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 6544555 456777899999984 8999999999999999875
No 5
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.86 E-value=4.7e-07 Score=66.20 Aligned_cols=106 Identities=14% Similarity=0.115 Sum_probs=84.8
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG 80 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg 80 (121)
...+.+..|+++|.|++|+... .+.+..+..+.++.++.+.. +.+++|..||.|.+| |+.......+.
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~--------~~~~~~~~~~~ 262 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLRE--GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL--------HVNKPDKYQLH 262 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--TEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE--------ETTSSCEEEEC
T ss_pred CCCCEEEEEecCCcEEEEECCC--CceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEE--------ECCCCCeEEEc
Confidence 4566899999999999999987 46777788889999999864 478999999999998 44455555555
Q ss_pred CCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 81 LPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 81 ~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
....+|+++... ++.|..++. +.|.++|..+.+....+
T Consensus 263 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 303 (337)
T 1gxr_A 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe
Confidence 556899999988 466777776 68999999998877544
No 6
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.82 E-value=1.1e-07 Score=72.55 Aligned_cols=106 Identities=8% Similarity=0.082 Sum_probs=83.8
Q ss_pred CCeEEEEec-CCeEEEEECCcccceeeeeEecC-CCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCc---eEEEe
Q psy16019 5 LPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKY---HTVTL 79 (121)
Q Consensus 5 ~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~---~~i~l 79 (121)
.+.+|+.++ ++.+++|+..+ .+.+.+++.+ ..=.-+.+.+.++|++..++.|.++ |.+.. +.|.+
T Consensus 75 g~~lyv~t~~~~~v~viD~~t--~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~vi--------D~~t~~v~~~I~V 144 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRT--LSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEI--------DPHTFKLIKKHNV 144 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTT--TEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEE--------CTTTCCEEEEEEC
T ss_pred CCEEEEEEecCCEEEEEECCC--CcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEE--------ECCCCcEEEEEEE
Confidence 468999995 78999999887 5778888765 3223477778899999999999999 55554 45777
Q ss_pred CCCCCce---eEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 80 GLPHHSV---RSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 80 g~~~~pV---~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
+....|+ .-|...+++||+... |.|.+||++|+++..++.+
T Consensus 145 g~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred CCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 7533564 467777899999985 8999999999999999875
No 7
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.82 E-value=5.6e-08 Score=74.32 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=84.2
Q ss_pred CCCeEEEEe-cCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceE---EEe
Q psy16019 4 VLPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHT---VTL 79 (121)
Q Consensus 4 ~~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~---i~l 79 (121)
..+.+|+.| +++.+++|+..+ .+.+.+++.+..=.-+.+.++++|++-.++.|.++ |.+..+. |.+
T Consensus 95 ~g~~ly~ltw~~~~v~v~D~~t--~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~i--------Dp~T~~v~~~I~V 164 (262)
T 3nol_A 95 WKDKIVGLTWKNGLGFVWNIRN--LRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFL--------DPESLTPVRTITV 164 (262)
T ss_dssp ETTEEEEEESSSSEEEEEETTT--CCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEE--------CTTTCSEEEEEEC
T ss_pred eCCEEEEEEeeCCEEEEEECcc--CcEEEEEECCCCceEEecCCCEEEEECCCCeEEEE--------cCCCCeEEEEEEe
Confidence 357899999 589999999988 67788898874223556778899999888889988 5555544 677
Q ss_pred CCCCCcee---EeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 80 GLPHHSVR---SLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 80 g~~~~pV~---~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
++...|++ -|..++++||+++- |.|.+||++|+++...+.+
T Consensus 165 ~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 165 TAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred ccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 54335654 47788999999985 8999999999999999875
No 8
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.5e-07 Score=68.37 Aligned_cols=104 Identities=14% Similarity=0.146 Sum_probs=78.2
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCC-EEEEEecCCcEEEEEcCCCCCCCCCCceEE-EeCCC
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLP 82 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~-~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~lg~~ 82 (121)
+.+..|+++|.|.+|+... .+++..++ ..++|.++.+..+ ++++|..||.|.+| |+.+.+.+ .+..+
T Consensus 196 ~~~~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iw--------d~~~~~~~~~~~~~ 265 (313)
T 3odt_A 196 GHFISCSNDGLIKLVDMHT--GDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIW--------SKENGSLKQVITLP 265 (313)
T ss_dssp TEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEE--------CTTTCCEEEEEECS
T ss_pred CeEEEccCCCeEEEEECCc--hhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEE--------ECCCCceeEEEecc
Confidence 3488999999999999987 46777776 4589999999854 89999999999998 55554432 33333
Q ss_pred CCceeEeeeeC-CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 83 HHSVRSLAAVY-NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 83 ~~pV~~m~~v~-~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
..+|.++.... +++.+|+. +.|++.|.++.+.....+
T Consensus 266 ~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 266 AISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp SSCEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC---
T ss_pred CceEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehhh
Confidence 47999999884 45666666 689999999987766544
No 9
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.80 E-value=3.9e-07 Score=70.75 Aligned_cols=105 Identities=18% Similarity=0.208 Sum_probs=75.0
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-EeCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLP 82 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~lg~~ 82 (121)
...+..|+.||.|.+|+... .+++.+++ .+++|.++.+.++.+++|..||.|.+| |+...+.+ .+...
T Consensus 249 ~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~--------d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPET--ETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVW--------DVETGNCIHTLTGH 318 (445)
T ss_dssp SSCEEEEETTSCEEEEEGGG--TEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEE--------ETTTCCEEEEECCC
T ss_pred CCEEEEEcCCCEEEEEECCC--CcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEE--------ECCCCCEEEEEcCC
Confidence 35677777778888887665 45566664 346788887777778888888888887 44444332 34333
Q ss_pred CCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 83 HHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 83 ~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
..++.++...++.+.+|+. +.|.++|..+.+..+.++
T Consensus 319 ~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 319 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp CSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred cccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 4788888888888888887 579999998888877764
No 10
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.77 E-value=3.1e-07 Score=71.34 Aligned_cols=102 Identities=17% Similarity=0.106 Sum_probs=81.9
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceE-EEeCC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHT-VTLGL 81 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~lg~ 81 (121)
....+..|+.||.|.+|+..+ .+++..+. ++++|+++.+.++.+++|..||+|.+|+ +++.+. -.+..
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd--------~~~~~~~~~~~~ 211 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNT--LECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD--------VNTGEMLNTLIH 211 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSS--CCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEE--------SSSCCEEEEECC
T ss_pred CCCEEEEEeCCCeEEEEeCCC--CeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEE--------CCCCcEEEEEcC
Confidence 356789999999999999877 46667775 4589999999999999999999999984 444333 24433
Q ss_pred CCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEE
Q psy16019 82 PHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVI 115 (121)
Q Consensus 82 ~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~ 115 (121)
...+|.++...++.+..|+. +.|.+.|..+.+..
T Consensus 212 h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 212 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp CCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCC
T ss_pred CCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCc
Confidence 45899999999999988888 68999999887644
No 11
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.75 E-value=8.2e-07 Score=68.85 Aligned_cols=105 Identities=17% Similarity=0.132 Sum_probs=84.4
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceE-EEe
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHT-VTL 79 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~l 79 (121)
..+.+..|++||.|.+|+..+ .+++..+. ..+.|.++.+.. +.+++|..||+|.+| |+.+.+. ..+
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw--------d~~~~~~~~~~ 348 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQ--MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW--------DLENGELMYTL 348 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE--------ETTTTEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCC--CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE--------ECCCCcEEEEE
Confidence 356799999999999999987 56777775 458999999975 489999999999998 5544444 355
Q ss_pred CCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 80 GLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 80 g~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
.....+|+++...++.|..|+. +.|.+.|..+.+....+
T Consensus 349 ~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 349 QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp CCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred eCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeee
Confidence 4445899999999999999888 58999999998766554
No 12
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.74 E-value=5.4e-07 Score=66.49 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=80.4
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL 81 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~ 81 (121)
.+.+..|++||.|.+|+..+..+.....+. +.++|.++.+.. +.+++|..||.|.+| |++....+.+-.
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw--------d~~~~~~~~~~~ 125 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW--------DLSSNQAIQIAQ 125 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE--------ETTTTEEEEEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE--------EcCCCCceeecc
Confidence 468999999999999998863233335554 568999999974 479999999999998 555555544433
Q ss_pred CCCceeEeee--eC--CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 82 PHHSVRSLAA--VY--NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 82 ~~~pV~~m~~--v~--~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
...+|+++.. .. +.|..|+. +.|.+.|..+.+....++
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE
T ss_pred ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe
Confidence 3489999997 42 44666666 689999999998877765
No 13
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.73 E-value=2.7e-06 Score=62.06 Aligned_cols=109 Identities=13% Similarity=0.162 Sum_probs=81.8
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.....+..|+.+|.|.+|+......+....+.- ...|.++.+.. +.+++|..||.|.+| |+...+.+ .
T Consensus 107 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~--------d~~~~~~~~~ 178 (337)
T 1gxr_A 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW--------DLHNQTLVRQ 178 (337)
T ss_dssp TTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEE--------ETTTTEEEEE
T ss_pred CCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEE--------eCCCCceeee
Confidence 345679999999999999988743334555544 47899999874 479999999999998 45454443 4
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.....+|+++... ++.|+.++. +.|+++|..+.+..+.++
T Consensus 179 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 222 (337)
T 1gxr_A 179 FQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD 222 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec
Confidence 43345899999887 467888877 589999999998887764
No 14
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.72 E-value=5.5e-07 Score=69.84 Aligned_cols=105 Identities=14% Similarity=0.143 Sum_probs=81.2
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCce-EEEeC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYH-TVTLG 80 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~-~i~lg 80 (121)
...+.+..|++||.|.+|+... .+++.+++ .+.+|.++.+.++.+++|..||+|.+| |+.... .....
T Consensus 320 ~~~~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vw--------d~~~~~~~~~~~ 389 (464)
T 3v7d_B 320 HERKRCISASMDTTIRIWDLEN--GELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGW--------DANDYSRKFSYH 389 (464)
T ss_dssp TTTTEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEE--------ETTTCCEEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCC--CcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEE--------ECCCCceeeeec
Confidence 4467899999999999999887 46777775 458999999999999999999999998 444432 23332
Q ss_pred CC-CCceeEeeeeCCEEEEEeCCeEEEEeCCCCcEEEE
Q psy16019 81 LP-HHSVRSLAAVYNKVWCGYKNKIHVVDPKSLDVIRP 117 (121)
Q Consensus 81 ~~-~~pV~~m~~v~~~lw~~~gn~I~Vi~~~tl~i~~~ 117 (121)
.. ...+.++.+.+..|.+|..+.|.+.|.++++..+.
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 390 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEES
T ss_pred CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEeh
Confidence 21 23444555557888888888999999999998764
No 15
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.71 E-value=8.1e-07 Score=65.96 Aligned_cols=104 Identities=13% Similarity=0.090 Sum_probs=79.2
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe----CCEEEEEecCCcEEEEEcCCCCCCCCCCc---
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKY--- 74 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~----~~~v~v~LanG~l~Vy~r~~~g~wd~~~~--- 74 (121)
.....+..|+.||.|.||+......+.+..++ +.++|.++.+. .+.+++|..||+|.+|+ +...
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd--------~~~~~~~ 92 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK--------EENGRWS 92 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE--------EETTEEE
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE--------cCCCcee
Confidence 45678999999999999998753345666665 45899999986 67899999999999984 4443
Q ss_pred eEEEeCCCCCceeEeeeeC----CEEEEEeC-CeEEEEeCCCCcE
Q psy16019 75 HTVTLGLPHHSVRSLAAVY----NKVWCGYK-NKIHVVDPKSLDV 114 (121)
Q Consensus 75 ~~i~lg~~~~pV~~m~~v~----~~lw~~~g-n~I~Vi~~~tl~i 114 (121)
....+.....+|+++.... +.+..|+. +.|.++|..+.+.
T Consensus 93 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 93 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 137 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence 2334443458999999884 46777777 5899999988743
No 16
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.70 E-value=8.3e-07 Score=64.41 Aligned_cols=115 Identities=16% Similarity=0.093 Sum_probs=81.5
Q ss_pred CCCCeEEEEecCCeEEEEECCcccc--eeeeeEe-cCCCEEEEEEe----CCEEEEEecCCcEEEEEcCCCCC-CCCCCc
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWR--RCLHSIQ-LKDSVLNIVHV----QGRVVCALADGSVAIFRRGPDGQ-WDLSKY 74 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~--~~l~~~~-l~~~V~~i~~~----~~~v~v~LanG~l~Vy~r~~~g~-wd~~~~ 74 (121)
.....+..|+.||.|.+|+...... +....++ +.++|+++.+. ++.+++|..||+|.+|+...+.. .....+
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence 4566899999999999999876322 3455554 45899999996 46889999999999997654321 111111
Q ss_pred e-EEEeCCCCCceeEeeeeC----CEEEEEeC-CeEEEEeCCCCcEEEE
Q psy16019 75 H-TVTLGLPHHSVRSLAAVY----NKVWCGYK-NKIHVVDPKSLDVIRP 117 (121)
Q Consensus 75 ~-~i~lg~~~~pV~~m~~v~----~~lw~~~g-n~I~Vi~~~tl~i~~~ 117 (121)
+ ...+.....+|.++.... +.+.+|+. +.|.+.|..+.+..+.
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 149 (351)
T 3f3f_A 101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRS 149 (351)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTC
T ss_pred ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcc
Confidence 2 334544458999999884 46777777 6899999988765443
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.67 E-value=3.8e-06 Score=61.92 Aligned_cols=106 Identities=16% Similarity=0.135 Sum_probs=81.5
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceE-EE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHT-VT 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~ 78 (121)
.....+..|+.||.|.+|+..+ .+++..++- .+.|.++.+.. +.+++|..||+|.+| |+...+. -.
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iw--------d~~~~~~~~~ 144 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--------DVKTGKCLKT 144 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE--------ETTTCCEEEE
T ss_pred CCCCEEEEECCCCEEEEEECCC--CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE--------ECCCCEEEEE
Confidence 4567889999999999999887 467777764 47899999874 589999999999998 4544433 24
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
+.....||+++... ++.+..|+. +.|.+.|..+.+..+.+
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 187 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 187 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence 43334899999887 356777776 68999999998877665
No 18
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.67 E-value=2.1e-06 Score=65.90 Aligned_cols=109 Identities=17% Similarity=0.016 Sum_probs=84.0
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL 81 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~ 81 (121)
.....+..|+.||.|.+|+..+ .+.+..+. ..+.|.++.+.++.+++|..||.|.+|+.... ......+..
T Consensus 144 ~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~ 215 (401)
T 4aez_A 144 HDGSFLSVGLGNGLVDIYDVES--QTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIA------NHQIGTLQG 215 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSS------SCEEEEEEC
T ss_pred CCCCEEEEECCCCeEEEEECcC--CeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccC------cceeeEEcC
Confidence 4566899999999999999887 45666764 45899999999999999999999999854321 122223333
Q ss_pred CCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 82 PHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 82 ~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
...+|.++... ++.|..|+. +.|.+.|..+.+....+.
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 256 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT 256 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC
T ss_pred CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec
Confidence 34899999987 467777777 689999999988877663
No 19
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.67 E-value=5.5e-07 Score=69.02 Aligned_cols=102 Identities=9% Similarity=0.055 Sum_probs=81.5
Q ss_pred CCeEEEEe-cCCeEEEEECCcccceeeeeEecCCCEEE--EEEeCCEEEEEec-CCcEEEEEcCCCCCCCCCCceE---E
Q psy16019 5 LPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKDSVLN--IVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT---V 77 (121)
Q Consensus 5 ~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~~V~~--i~~~~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~---i 77 (121)
.+++|.+| ++|.|.+++..+ .+.++++ ++...+. |...++++|++.- ++.+.|| |.++.+. +
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~T--gkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~--------D~~Tl~~~~ti 132 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLES--AQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTW--------SGMPPQRERTT 132 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSC--SSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEE--------ETTTTEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCC--CcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEE--------ECCcCcEEEEE
Confidence 46899999 568899999887 5778888 8887665 7888999999853 6789999 5566655 4
Q ss_pred EeCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEe
Q psy16019 78 TLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~~ 120 (121)
+.+ .++. -++..+++||.+.| ++|++||++|+++.++++|
T Consensus 133 ~~~--~eGw-GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 133 RYS--GEGW-GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp ECS--SCCC-CEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred eCC--Ccee-EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 553 3553 45677899999997 8999999999999999987
No 20
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.66 E-value=2e-06 Score=64.84 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=82.6
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.....+..|+.||.|.+|+... .+++++++ ...+|.++.+.. ..+++|..||+|.+| |+.....+ .
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iw--------d~~~~~~~~~ 243 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIAT--GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY--------DVQHANLAGT 243 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEE--------ETTTCCEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCC--CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEE--------ECCCcceeEE
Confidence 4566899999999999999887 56777775 447899999974 478889999999998 44444332 4
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.....+|.++... +..|..|+. +.|.+.|..+.+..+.|.
T Consensus 244 ~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 244 LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 44334789999887 466777776 589999999999887763
No 21
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.65 E-value=9.2e-07 Score=67.28 Aligned_cols=108 Identities=12% Similarity=0.083 Sum_probs=82.3
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.....+..|+.||.|.+|+... .+++..+ .++++|.++.+.. +.+++|..||+|.+|+.... .....+.-
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-----~~~~~~~~ 179 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNF--NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-----SNPRTLIG 179 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTS--CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CCCEEEEC
T ss_pred cCCCEEEEEECCCCEEEEeCCC--cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----cCceEEcC
Confidence 3456899999999999999886 4555555 4568999999974 47999999999999854321 12233433
Q ss_pred CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
. ..+|.++... ++.|..|+. +.|.+.|..+.+..+.++
T Consensus 180 h--~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 180 H--RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp C--SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred C--CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEee
Confidence 3 4899999988 467887777 579999999999888875
No 22
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.64 E-value=3.1e-06 Score=64.78 Aligned_cols=107 Identities=13% Similarity=0.153 Sum_probs=83.1
Q ss_pred CCCeEEEEecCCeEEEEECCcccc-----eeeeeEe-cCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCc
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWR-----RCLHSIQ-LKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~-----~~l~~~~-l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~ 74 (121)
....+..|++||.|.||+..+... +++..+. +.+.|.++.++. +.+++|..||+|.+| |+...
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw--------d~~~~ 164 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVW--------DVGTG 164 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEE--------ETTTT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEE--------ECCCC
Confidence 467899999999999999877411 4456665 558999999984 468889999999998 55555
Q ss_pred eE-EEe--CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 75 HT-VTL--GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 75 ~~-i~l--g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
+. ..+ .....+|.++... ++.|..|+. +.|.++|..+.+..+.+
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 165 AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee
Confidence 44 355 3335899999987 467888887 68999999999988876
No 23
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.63 E-value=2.1e-06 Score=64.66 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=81.4
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEec-------CCCEEEEEEe--CCEEEEEecC---CcEEEEEcCCCCCCCCCCc
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQL-------KDSVLNIVHV--QGRVVCALAD---GSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-------~~~V~~i~~~--~~~v~v~Lan---G~l~Vy~r~~~g~wd~~~~ 74 (121)
.+..|+++|.|.+|+..+ .+.+..++. ..+|.++.+. ...+++|..| |.|.+|+ +...
T Consensus 199 ~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d--------~~~~ 268 (397)
T 1sq9_A 199 LIATGFNNGTVQISELST--LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE--------TEFG 268 (397)
T ss_dssp EEEEECTTSEEEEEETTT--TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE--------TTTC
T ss_pred eEEEEeCCCcEEEEECCC--CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEE--------CCCC
Confidence 888999999999999987 567777775 7799999986 4578889999 9999984 4333
Q ss_pred eE-EEeCC-------------CCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 75 HT-VTLGL-------------PHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 75 ~~-i~lg~-------------~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+. ..+.. ...+|+++... ++.|..|+. +.|++.|..+.+....++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 32 23322 24799999987 567888777 689999999999988876
No 24
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.61 E-value=2.2e-06 Score=63.31 Aligned_cols=101 Identities=9% Similarity=0.134 Sum_probs=78.7
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-Ee
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TL 79 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~l 79 (121)
...+..|+.||.|.+|+..+ .+.+..++ ..++|.++.+.. +.+++|..||.|.+| |+...+.+ .+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iw--------d~~~~~~~~~~ 154 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPIT--MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLW--------NIQTDTLVAIF 154 (366)
T ss_dssp CEEEEEEETTCEEEEECTTT--CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEE--------ETTTTEEEEEE
T ss_pred CCEEEEecCCCEEEEEEchh--ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEE--------EeecCeEEEEe
Confidence 45799999999999999887 46677776 568999999964 578888999999998 55555443 33
Q ss_pred ---CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEE
Q psy16019 80 ---GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVI 115 (121)
Q Consensus 80 ---g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~ 115 (121)
.....+|+++... ++.|.+|+. +.|.+.|..+.+..
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHH
T ss_pred cccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccc
Confidence 2335899999987 467888777 68999999887543
No 25
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.61 E-value=2e-06 Score=66.80 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=83.2
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
+..+.+..|++||.|.||+... .+..++++ +.++|.++.+.. +.+++|..||+|.+| |+.....+ .
T Consensus 118 p~~~~l~s~s~Dg~i~vwd~~~--~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iw--------d~~~~~~~~~ 187 (410)
T 1vyh_C 118 PVFSVMVSASEDATIKVWDYET--GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW--------DFQGFECIRT 187 (410)
T ss_dssp SSSSEEEEEESSSCEEEEETTT--CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEE--------ETTSSCEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCC--CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEE--------eCCCCceeEE
Confidence 3456889999999999999887 45667775 458999999874 578999999999997 55555443 3
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.....+|.++... ++.|..|+. +.|.+.|..+.+..+.|.
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~ 231 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 33334799999887 467777777 689999999998887764
No 26
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.60 E-value=2.7e-06 Score=65.38 Aligned_cols=105 Identities=11% Similarity=0.060 Sum_probs=80.8
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEec---CCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL---KDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV- 77 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l---~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i- 77 (121)
..+.+..|+.||.|.+|+... .+++..++. .+.|.++.+. +..+++|..||+|.+| |+...+.+
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw--------d~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRT--LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIW--------DIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTT--CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEE--------ETTTTEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCC--CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEE--------EcCCccEEE
Confidence 366899999999999999987 567777764 4799999996 4578999999999998 55555443
Q ss_pred --EeCCCCCceeEeeeeC------CEEEEEeCC-eEEEEeCCCCcEEEEEE
Q psy16019 78 --TLGLPHHSVRSLAAVY------NKVWCGYKN-KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 78 --~lg~~~~pV~~m~~v~------~~lw~~~gn-~I~Vi~~~tl~i~~~~~ 119 (121)
.++. ..||+++.... ..|..|+.+ .|.+.|..+++..+.|.
T Consensus 251 ~~~~~~-~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 251 SWSFGD-HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp EEBCTT-CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred EEecCC-CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 3333 36999995542 256666664 69999999999888775
No 27
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.59 E-value=4.6e-06 Score=61.52 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=78.3
Q ss_pred CCCeEEEEecCCeEEEEECCcccc-eeeeeEe---cCCCEEEEEEeCC------EEEEEecCCcEEEEEcCCCCCCCCCC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWR-RCLHSIQ---LKDSVLNIVHVQG------RVVCALADGSVAIFRRGPDGQWDLSK 73 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~-~~l~~~~---l~~~V~~i~~~~~------~v~v~LanG~l~Vy~r~~~g~wd~~~ 73 (121)
..+.+..+..+|.|.+|+..+... +.+.... ....|+++.+..+ .+++|..||.|.+| |+.+
T Consensus 33 ~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~--------d~~~ 104 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII--------NPIT 104 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEE--------CTTT
T ss_pred CCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEE--------Echh
Confidence 356789999999999999886311 2333333 2368999998865 79999999999998 4444
Q ss_pred ceEE-EeCCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 74 YHTV-TLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 74 ~~~i-~lg~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
.+.+ .+.....+|+++.... +.|..|+. +.|.+.|..+.+....+
T Consensus 105 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 105 MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 4332 3322348999999863 66777776 68999999999888776
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.58 E-value=5.2e-06 Score=61.16 Aligned_cols=107 Identities=16% Similarity=0.111 Sum_probs=80.5
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.....+..|+.||.|.+|+..+ .+....+. ...+|.++.+.. +.+++|..||+|.+| |+++.+.+ .
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw--------d~~~~~~~~~ 102 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW--------DVSSGKCLKT 102 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE--------ETTTCCEEEE
T ss_pred CCCCEEEEeeCCCeEEEEeCCC--cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE--------ECCCCcEEEE
Confidence 4456788999999999999877 35555664 457999999874 578899999999998 44444332 3
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.....+|.++... ++.|..|+. +.|.+.|.++.+..+.+.
T Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 146 (312)
T 4ery_A 103 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 146 (312)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec
Confidence 32234799998887 366777776 689999999998887764
No 29
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.58 E-value=2.8e-06 Score=64.42 Aligned_cols=106 Identities=15% Similarity=0.127 Sum_probs=80.2
Q ss_pred CCeEEEEec-CCeEEEEECCcccceeeeeEecCCCEEEEEE-eCCEEEEEe-cCCcEEEEEcCCCCCCCCCCceE---EE
Q psy16019 5 LPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVH-VQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHT---VT 78 (121)
Q Consensus 5 ~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~-~~~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~---i~ 78 (121)
.+.+|++++ ++.|.+++..+ .+.++++.....+..|.. .++++||+. .+|.|.+| |.+..++ +.
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t--~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~i--------D~~t~~~~~~i~ 122 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINT--FKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFII--------NPKTYEITGYIE 122 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTT--CCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEE--------ETTTTEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEECcc--cEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEE--------ECCCCeEEEEEE
Confidence 467899987 68999999887 456677765567778887 678999999 78999999 5555444 45
Q ss_pred eCCCC---CceeEeeeeCCEEEEEe---CCeEEEEeCCCCcEEEEEEe
Q psy16019 79 LGLPH---HSVRSLAAVYNKVWCGY---KNKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 79 lg~~~---~pV~~m~~v~~~lw~~~---gn~I~Vi~~~tl~i~~~~~~ 120 (121)
++... .....|+..+++||++. ++.|.+||++|+++.+++++
T Consensus 123 ~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp CTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred cCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 55410 12345667899999996 47899999999999988764
No 30
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.57 E-value=6e-06 Score=61.98 Aligned_cols=109 Identities=9% Similarity=0.069 Sum_probs=77.7
Q ss_pred CCCC-eEEEEecCCeEEEEEC----Ccccc----eeeeeEec-----------CCCEEEEEEeC--CEEEEEecCCcEEE
Q psy16019 3 SVLP-TMWLGSQNGSVFVHSA----VSQWR----RCLHSIQL-----------KDSVLNIVHVQ--GRVVCALADGSVAI 60 (121)
Q Consensus 3 ~~~~-tvwiGt~~g~I~v~~~----~~~~~----~~l~~~~l-----------~~~V~~i~~~~--~~v~v~LanG~l~V 60 (121)
...+ .+..|+.||.|.+|+. .+... .....+.. .++|.++.+.. +.+++|..||.|.+
T Consensus 55 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 134 (425)
T 1r5m_A 55 PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRL 134 (425)
T ss_dssp SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3455 8999999999999998 55310 02333333 35899999974 47999999999999
Q ss_pred EEcCCCCCCCCCCceEEEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 61 FRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 61 y~r~~~g~wd~~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
|+ .+......+.....+|+++... ++.|+.++. +.|.++|..+.+..+.+.
T Consensus 135 ~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 135 WN--------KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp EE--------TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred Ee--------CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 95 2222333444445899999987 467877776 689999999999888765
No 31
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.57 E-value=2.3e-06 Score=64.90 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=78.2
Q ss_pred CCeEEEEe-cCCeEEEEECCcccceeeeeEecCC------CEEEEEEeCCEEEEEe--cCCcEEEEEcCCCCCCCCCCce
Q psy16019 5 LPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKD------SVLNIVHVQGRVVCAL--ADGSVAIFRRGPDGQWDLSKYH 75 (121)
Q Consensus 5 ~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~------~V~~i~~~~~~v~v~L--anG~l~Vy~r~~~g~wd~~~~~ 75 (121)
.+.+|++. .++.|++++..+ .+..+++.++. ....|...++++||+. .+++|.+| |.+..+
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t--~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~vi--------D~~t~~ 163 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKT--YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKI--------DTETDK 163 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTT--TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEE--------ETTTTE
T ss_pred CCeEEEEECCCCeEEEEECCC--CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEE--------ECCCCe
Confidence 35899999 789999999887 46667777665 6666777899999998 38899999 444443
Q ss_pred ---EEEeCCCCCceeEeeee-CCEEEEEeC------------CeEEEEeCCCCcEEEEEEe
Q psy16019 76 ---TVTLGLPHHSVRSLAAV-YNKVWCGYK------------NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 76 ---~i~lg~~~~pV~~m~~v-~~~lw~~~g------------n~I~Vi~~~tl~i~~~~~~ 120 (121)
.+.++. .| ..|... ++++|+++. +.|++||+.|+++.+.+.+
T Consensus 164 ~~~~i~~g~--~p-~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 164 VVDELTIGI--QP-TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp EEEEEECSS--CB-CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCC--Cc-cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 355655 45 355555 488999886 4799999999999988764
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.57 E-value=4.3e-06 Score=63.09 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=81.7
Q ss_pred CeEEEEecC---CeEEEEECCcccceeeeeEecCCCEE--EEEEeCCEEEEEec-CCcEEEEEcCCCCCCCCCCceE---
Q psy16019 6 PTMWLGSQN---GSVFVHSAVSQWRRCLHSIQLKDSVL--NIVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT--- 76 (121)
Q Consensus 6 ~tvwiGt~~---g~I~v~~~~~~~~~~l~~~~l~~~V~--~i~~~~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~--- 76 (121)
+++|.+|.. ..|.+++..+ .+.++++++|+..+ -|...++++|+..- ++.+.|| |.++.+.
T Consensus 31 ~~LyestG~~g~S~v~~vD~~t--gkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~--------D~~tl~~~~t 100 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLET--GRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVY--------DLATLTPRAR 100 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTT--CCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEE--------ETTTTEEEEE
T ss_pred CEEEEECCCCCCceEEEEECCC--CCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEE--------ECCcCcEEEE
Confidence 689999865 4899999988 57889999997664 35777899999852 6789999 5555554
Q ss_pred EEeCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEe
Q psy16019 77 VTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~~ 120 (121)
++.+. ++. -|+..+++||.+.| ++|+++|++|+++.++++|
T Consensus 101 i~~~~--~Gw-glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 101 FRYPG--EGW-ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EECSS--CCC-EEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EeCCC--Cce-EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 45543 664 55666899999999 7999999999999999987
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.57 E-value=1.6e-06 Score=65.13 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=78.4
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCC-EEEEEecCCcEEEEEcCCCCCCCCCCceEE-Ee
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTV-TL 79 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~-~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~l 79 (121)
.....+..|+.+|.|.+|+... .+.+..+. ...+|.++.+..+ .++++..||.|.+| |+...+.+ .+
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~--------d~~~~~~~~~~ 326 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGN--GNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLW--------SLKQNTLLALS 326 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSS--BSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEE--------ETTTTEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCC--CccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEE--------ECCCCcEeEec
Confidence 3456899999999999999887 45666665 5589999999855 89999999999998 45444443 22
Q ss_pred CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
.....+|.++... ++.|++|+. +.|.++|..+.+
T Consensus 327 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 327 IVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp ECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred ccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 2224799999887 477888887 589999999887
No 34
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.56 E-value=7e-06 Score=61.86 Aligned_cols=107 Identities=18% Similarity=0.189 Sum_probs=81.6
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.....+..|+.+|.|.+|+... .+....+..+ ..|.++.+.. ..+.+|..||.|.+| |+...+.+ .
T Consensus 132 pdg~~l~~g~~dg~v~i~~~~~--~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iw--------d~~~~~~~~~ 201 (321)
T 3ow8_A 132 PDSQYLATGTHVGKVNIFGVES--GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF--------DIATGKLLHT 201 (321)
T ss_dssp TTSSEEEEECTTSEEEEEETTT--CSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEE--------ETTTTEEEEE
T ss_pred CCCCEEEEEcCCCcEEEEEcCC--CceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEE--------ECCCCcEEEE
Confidence 4556889999999999999887 3555666544 6899999874 478899999999998 55555443 4
Q ss_pred eCCCCCceeEeeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v~--~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.....||+++.... ..|..|+. +.|++.|..+.+....+.
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS 245 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc
Confidence 444458999999874 56666666 579999999988877654
No 35
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.56 E-value=1.8e-06 Score=65.86 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=81.4
Q ss_pred CCeEEEEec-CC--eEEEEECCcccceeeeeEecCCCEEE--EEEeCCEEEEEec-CCcEEEEEcCCCCCCCCCCceE--
Q psy16019 5 LPTMWLGSQ-NG--SVFVHSAVSQWRRCLHSIQLKDSVLN--IVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT-- 76 (121)
Q Consensus 5 ~~tvwiGt~-~g--~I~v~~~~~~~~~~l~~~~l~~~V~~--i~~~~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~-- 76 (121)
.+++|.+|. +| .|.+++..+ .+.++++.++...+. |...++++|++.- ++.+.|| |.++.+.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~T--gkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~--------D~~t~~~~~ 121 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIES--GKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVW--------NIRNLRQVR 121 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTT--CCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEE--------ETTTCCEEE
T ss_pred CCEEEEECCCCCCceEEEEECCC--CcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEE--------ECccCcEEE
Confidence 358999995 44 899999888 578889999877655 7888999999975 6789999 5555544
Q ss_pred -EEeCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEe
Q psy16019 77 -VTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 77 -i~lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~~ 120 (121)
++.+. ++. -++..++.||.+.| ++|.++|++|+++.++++|
T Consensus 122 ti~~~~--eG~-glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 122 SFNYDG--EGW-GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEECSS--CCC-CEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEECCC--Cce-EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 55543 553 44566899999997 7899999999999999887
No 36
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.56 E-value=2.1e-06 Score=65.86 Aligned_cols=104 Identities=16% Similarity=0.176 Sum_probs=76.8
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeE-----ecCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSI-----QLKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-----~l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.+.+..|+.||.|.||+..+. +++..+ .+.++|+++.+.. .+++.|..||+|.+| |+...+.+
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~--~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw--------d~~~~~~~ 162 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDEN--ETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW--------DLAQQVVL 162 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTT--SSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE--------ETTTTEEE
T ss_pred CCeEEEEECCCEEEEEeccCC--CceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE--------ECCCCcEE
Confidence 467889999999999998773 332222 2458999999974 478899999999997 66666554
Q ss_pred -EeCCCCCceeEeeeeC--CEE-EEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 78 -TLGLPHHSVRSLAAVY--NKV-WCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 78 -~lg~~~~pV~~m~~v~--~~l-w~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
.+.....+|+++.... ..+ ..|+. +.|++.|..+.+..+.+
T Consensus 163 ~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 163 SSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred EEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee
Confidence 4443358999999874 334 44444 68999999998877665
No 37
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.55 E-value=1e-05 Score=58.57 Aligned_cols=102 Identities=23% Similarity=0.205 Sum_probs=77.4
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe---CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG 80 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~---~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg 80 (121)
.+.+..|++||.|.+|+ . .+....+. ...+|.++.+. ++.++++..||.|.+|+ ...+ ...+.
T Consensus 114 ~~~l~~~~~d~~i~~~d-~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--------~~~~-~~~~~ 180 (313)
T 3odt_A 114 DGVVISGSWDKTAKVWK-E---GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--------NDKV-IKTFS 180 (313)
T ss_dssp TTEEEEEETTSEEEEEE-T---TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--------TTEE-EEEEC
T ss_pred CCEEEEEeCCCCEEEEc-C---CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--------cCce-EEEEe
Confidence 45788999999999999 2 34556665 44789998874 67899999999999984 2222 22333
Q ss_pred C-CCCceeEeeee-CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 81 L-PHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 81 ~-~~~pV~~m~~v-~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
. ...+|+++... ++.+.+|+. +.|.++|..+.+..+.++
T Consensus 181 ~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 181 GIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp SSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhh
Confidence 2 35899999988 466877777 589999999999888875
No 38
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.55 E-value=5.9e-06 Score=61.35 Aligned_cols=107 Identities=14% Similarity=0.114 Sum_probs=80.1
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceE-E
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHT-V 77 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i 77 (121)
++..+.+..|+.||.|.+|+... .+++.+++.+ .+|.++.+. ++.+++|..||+|.+|+ ++..+. .
T Consensus 22 sp~~~~l~s~~~dg~v~lWd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd--------~~~~~~~~ 91 (304)
T 2ynn_A 22 HPTEPWVLTTLYSGRVELWNYET--QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN--------YNTGEKVV 91 (304)
T ss_dssp CSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE--------TTTCCEEE
T ss_pred CCCCCEEEEEcCCCcEEEEECCC--CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE--------CCCCcEEE
Confidence 45667899999999999999887 4677778755 789999886 46899999999999984 443322 2
Q ss_pred EeCCCCCceeEeeeeC--CEEEEEeC-CeEEEEeCCCC-cEEEEE
Q psy16019 78 TLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSL-DVIRPV 118 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~--~~lw~~~g-n~I~Vi~~~tl-~i~~~~ 118 (121)
.+.....+|+++.... +.|..|+. +.|.+.|.++. .+.+.+
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 3333348999999874 56777777 58999998876 444444
No 39
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.55 E-value=5.2e-07 Score=66.55 Aligned_cols=100 Identities=18% Similarity=0.212 Sum_probs=75.4
Q ss_pred CCCeEEEEecCCeEEEEECCcccce--eeeeEecCCCEEEEEEe--CC-EEEEEecCCcEEEEEcCCCCCCCC-CCceEE
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRR--CLHSIQLKDSVLNIVHV--QG-RVVCALADGSVAIFRRGPDGQWDL-SKYHTV 77 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~--~l~~~~l~~~V~~i~~~--~~-~v~v~LanG~l~Vy~r~~~g~wd~-~~~~~i 77 (121)
....+..|+.||.|.+|+.....++ ......+..+|+++.+. ++ .+++|..||.|.+| |+ +.....
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w--------d~~~~~~~~ 93 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV--------DLIGSPSFQ 93 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE--------CSSSSSSEE
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE--------EeccCCceE
Confidence 4567999999999999998764311 23333566899999987 45 79999999999998 44 444444
Q ss_pred EeCC--CCCceeEeeee-CCEEEEEeC-CeEEEEeCCC
Q psy16019 78 TLGL--PHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKS 111 (121)
Q Consensus 78 ~lg~--~~~pV~~m~~v-~~~lw~~~g-n~I~Vi~~~t 111 (121)
.+.. ...+|++|... ++.+..|+. +.|.+.|..+
T Consensus 94 ~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 94 ALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp ECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHH
T ss_pred eccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccc
Confidence 5544 45899999988 678887777 6899998776
No 40
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.54 E-value=7.3e-06 Score=60.35 Aligned_cols=107 Identities=11% Similarity=0.079 Sum_probs=79.7
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG 80 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg 80 (121)
....+..|+.+|.|++|+.... .+.+..+.. ..+|.++.+. .+.++++..||.|.+| |+...+.+..-
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~--------d~~~~~~~~~~ 256 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNN-YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLV--------DVSTLQVLKKY 256 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE--------ETTTCCEEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCC-cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEE--------ECCCCceeeee
Confidence 4568899999999999998863 345666654 5799999986 4478889999999998 44444343111
Q ss_pred CCCCceeEeeee--CCEEEEEeCC---------------eEEEEeCCCCcEEEEEE
Q psy16019 81 LPHHSVRSLAAV--YNKVWCGYKN---------------KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 81 ~~~~pV~~m~~v--~~~lw~~~gn---------------~I~Vi~~~tl~i~~~~~ 119 (121)
....++.++... +..+++|++. .|.+.|..+.+....+.
T Consensus 257 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 312 (369)
T 3zwl_B 257 ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ 312 (369)
T ss_dssp ECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE
T ss_pred cCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee
Confidence 133788888877 4778888774 69999999988887764
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.54 E-value=2.2e-06 Score=64.81 Aligned_cols=110 Identities=10% Similarity=0.039 Sum_probs=80.9
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCC---EEEEEecCCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~---~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
.....+..|++||.|.+|+... +++..+. ..+.|.++.+..+ .+++|..||+|.+|+...... .....-.
T Consensus 173 ~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---~~~~~~~ 246 (383)
T 3ei3_B 173 VSRQMLATGDSTGRLLLLGLDG---HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD---KNSYIAE 246 (383)
T ss_dssp TTTTEEEEEETTSEEEEEETTS---CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS---TTCEEEE
T ss_pred CCCCEEEEECCCCCEEEEECCC---CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc---ccceEEE
Confidence 3456899999999999999853 5667775 4589999999865 788999999999996543210 1112223
Q ss_pred eCCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
++. ..+|+++.... +.|..|+. +.|.+.|..+.+..+.+.
T Consensus 247 ~~~-~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 247 MPH-EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp EEC-SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred ecC-CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 332 47999999864 67777777 689999999887765553
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.53 E-value=7.9e-06 Score=61.61 Aligned_cols=105 Identities=12% Similarity=0.206 Sum_probs=78.7
Q ss_pred CCCCeEEE-EecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC--CEEEEEe---cCCcEEEEEcCCCCCCCCCCceE
Q psy16019 3 SVLPTMWL-GSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ--GRVVCAL---ADGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 3 ~~~~tvwi-Gt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~--~~v~v~L---anG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
.....+|+ +.++|.|++|+... .+++..+..++.+.++.+.. .++|++. .||.|.+| |+...+.
T Consensus 167 ~dg~~l~~~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~--------d~~~~~~ 236 (391)
T 1l0q_A 167 PDGTKVYVANFDSMSISVIDTVT--NSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI--------DTGTNKI 236 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTT--TEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEE--------ETTTTEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCC--CeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEE--------ECCCCeE
Confidence 34556764 56789999999887 46677777788889988874 4788888 68999998 4444433
Q ss_pred ---EEeCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 77 ---VTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 77 ---i~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
+..+. .+.++... ++.||++++ +.|.++|..++++.+.+++
T Consensus 237 ~~~~~~~~---~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 237 TARIPVGP---DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp EEEEECCS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEecCC---CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence 34333 45677766 568988875 7899999999999988764
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.53 E-value=1.9e-06 Score=63.59 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=76.6
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV- 77 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i- 77 (121)
+.....+..|+.||.|.+|+..+ .+.+..++ ..++|.++.+. ++.++++..||.|.+| |+...+.+
T Consensus 41 s~~~~~l~~~~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw--------d~~~~~~~~ 110 (369)
T 3zwl_B 41 NKEGDLLFSCSKDSSASVWYSLN--GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW--------DVSNGQCVA 110 (369)
T ss_dssp CTTSCEEEEEESSSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE--------ETTTCCEEE
T ss_pred cCCCCEEEEEeCCCEEEEEeCCC--chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE--------ECCCCcEEE
Confidence 34567899999999999999887 46677775 55899999997 4588999999999998 44444332
Q ss_pred EeCCCCCceeEeeee--CCEEEEEeCC------eEEEEeCCCCc
Q psy16019 78 TLGLPHHSVRSLAAV--YNKVWCGYKN------KIHVVDPKSLD 113 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v--~~~lw~~~gn------~I~Vi~~~tl~ 113 (121)
.+. ...+|.++... ++.+.+++.+ .|.++|..+.+
T Consensus 111 ~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 111 TWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp EEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred Eee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 222 34799999888 4777777764 89999877654
No 44
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.51 E-value=1.1e-05 Score=61.38 Aligned_cols=111 Identities=12% Similarity=0.167 Sum_probs=82.6
Q ss_pred CeE-EEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCC------------------
Q psy16019 6 PTM-WLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPD------------------ 66 (121)
Q Consensus 6 ~tv-wiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~------------------ 66 (121)
+.+ ..|..++.|.+|+..+ .+++..+..+++|.++....+.++++. |+.+.+|+-...
T Consensus 71 ~~~~~~~~~d~~v~iWd~~~--~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~ 147 (355)
T 3vu4_A 71 NYVAFVTGVKEVVHIWDDVK--KQDVSRIKVDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIRFGGVCEFSN 147 (355)
T ss_dssp SEEEEECSSTTEEEEEETTT--TEEEEEEECSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEEEEEEEEEET
T ss_pred CEEEEEECCccEEEEEECCC--CcEEEEEECCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEeccCCceEEEEc
Confidence 344 5688899999999887 577888888999999999988777764 778888876543
Q ss_pred -------C-------CCCCCCce-----------------EEEeCCCCCceeEeeeeC--CEEEEEeC-Ce-EEEEeCCC
Q psy16019 67 -------G-------QWDLSKYH-----------------TVTLGLPHHSVRSLAAVY--NKVWCGYK-NK-IHVVDPKS 111 (121)
Q Consensus 67 -------g-------~wd~~~~~-----------------~i~lg~~~~pV~~m~~v~--~~lw~~~g-n~-I~Vi~~~t 111 (121)
| .||+.... ...+.....+|+|+.... +.|..|+. +. |.+.|..+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 2 26766532 333433358999999874 56777776 45 99999999
Q ss_pred CcEEEEEE
Q psy16019 112 LDVIRPVT 119 (121)
Q Consensus 112 l~i~~~~~ 119 (121)
++..+.|+
T Consensus 228 ~~~~~~~~ 235 (355)
T 3vu4_A 228 GVLVREFR 235 (355)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEE
Confidence 99988875
No 45
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.51 E-value=9.4e-06 Score=61.79 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=80.3
Q ss_pred CeEEEEec---CCeEEEEECCcccceeeeeEecCCC--EEEEEEeCCEEEEEec-CCcEEEEEcCCCCCCCCCCceE---
Q psy16019 6 PTMWLGSQ---NGSVFVHSAVSQWRRCLHSIQLKDS--VLNIVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT--- 76 (121)
Q Consensus 6 ~tvwiGt~---~g~I~v~~~~~~~~~~l~~~~l~~~--V~~i~~~~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~--- 76 (121)
+++|+++. ++.|.+++... .+.++++.+++. ...+...++++|++.- +|.+.|| |.+..+.
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~t--g~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~vi--------D~~t~~v~~~ 101 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQT--GKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIY--------DRRTLSNIKN 101 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTT--CCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEE--------ETTTTEEEEE
T ss_pred CeEEEECCCCCCCEEEEEECCC--CCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEE--------ECCCCcEEEE
Confidence 68999985 57999999988 577888888753 3356677889999975 5789999 5555544
Q ss_pred EEeCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEe
Q psy16019 77 VTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~~ 120 (121)
|+.+ .+++.. |..-+++||.+.+ ++|++||++|+++.++++|
T Consensus 102 i~~g-~~~g~g-lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 102 FTHQ-MKDGWG-LATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EECC-SSSCCE-EEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EECC-CCCeEE-EEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 5666 235543 6667899999998 8999999999999999876
No 46
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.51 E-value=1.1e-05 Score=60.75 Aligned_cols=107 Identities=14% Similarity=0.149 Sum_probs=82.0
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceE-EE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHT-VT 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~ 78 (121)
.....+..|+.||.|.+|+..+ .+++.++. ++++|.++.+. ++.+++|..||+|.+| |+...+. ..
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~--~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iw--------d~~~~~~~~~ 263 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVRE--GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF--------DLRADQELMT 263 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTT--CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--------ETTTTEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCC--CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEE--------ECCCCcEEEE
Confidence 3456788999999999999887 46677775 45799999987 4588999999999998 5554433 33
Q ss_pred eCCC--CCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLP--HHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~--~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+..+ ..+|+++... +..|.+|+. +.|.+.|..+.+....+.
T Consensus 264 ~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~ 309 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309 (340)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee
Confidence 4332 3589998877 467888887 589999999988877764
No 47
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.51 E-value=1.5e-05 Score=63.12 Aligned_cols=104 Identities=14% Similarity=0.059 Sum_probs=81.2
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEe-cCC---CEEEEEEeCC---EEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKD---SVLNIVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~---~V~~i~~~~~---~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.+..|++||.|.+|+... .+++..++ ..+ +|.++.+..+ .+++|..||.|.+| |+.+.+.+ .
T Consensus 175 ~l~~~~~d~~v~vwd~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw--------d~~~~~~~~~ 244 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPP--FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCF--------DGKSGEFLKY 244 (615)
T ss_dssp EEEEEETTTEEEEEETTT--BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEE--------ETTTCCEEEE
T ss_pred EEEEEeCCCcEEEEeCCC--cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEE--------ECCCCCEeEE
Confidence 688999999999999877 56677776 446 8999999854 78889999999998 44444443 4
Q ss_pred e-C---CCCCceeEeeee-CCEEEEEeC-CeEEEEeCCCCcEEEEEEe
Q psy16019 79 L-G---LPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 79 l-g---~~~~pV~~m~~v-~~~lw~~~g-n~I~Vi~~~tl~i~~~~~~ 120 (121)
+ . ....+|.++... ++.|+.++. +.|.+.|..+.+..+.++.
T Consensus 245 ~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp CCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 4 1 235899999885 567777776 5899999999998887753
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.51 E-value=1.1e-05 Score=60.91 Aligned_cols=103 Identities=14% Similarity=0.099 Sum_probs=75.7
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEe---cCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQ---LKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~---l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
..+..|+.||.|.||+.... +....++ ..++|.++.+.. +.+++|..||+|.+| |+.......+
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw--------d~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQ--NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR--------DFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBTSCEEEEETTST--TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE--------ETTSCEEEEE
T ss_pred CEEEEEcCCCeEEEEeCCCc--ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE--------ECCCCceEEE
Confidence 68999999999999999873 3344443 558999999976 578899999999998 4444433333
Q ss_pred CCC---CCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 80 GLP---HHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 80 g~~---~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
... ..+|+++... ++.|+.|+. +.|.+.|. +.+....+.
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~ 201 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEK 201 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEec
Confidence 221 3789999988 477888877 68999998 455555543
No 49
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.51 E-value=1.5e-05 Score=59.62 Aligned_cols=107 Identities=8% Similarity=0.061 Sum_probs=82.6
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.....+..|+.||.|.+|+..+ .+++.++. +.++|.++.+.. ..++.|..||++.+| |++......+
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vw--------d~~~~~~~~~ 144 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVAT--GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW--------TIKGQCLATL 144 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEE--------ETTSCEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEECCC--CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEE--------ECCCCeEEEE
Confidence 4556788999999999999987 46677775 558999999874 478999999999998 5555555555
Q ss_pred CCCCCceeEeeeeCC--------EEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 80 GLPHHSVRSLAAVYN--------KVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 80 g~~~~pV~~m~~v~~--------~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.....+|.++..... .+..|+. +.|.+.|..+.+.+..|.
T Consensus 145 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 193 (319)
T 3frx_A 145 LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI 193 (319)
T ss_dssp CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec
Confidence 444578998887642 4666666 689999999998887663
No 50
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.49 E-value=1.1e-05 Score=60.77 Aligned_cols=108 Identities=11% Similarity=0.147 Sum_probs=77.5
Q ss_pred CCCCeEE-EEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec-CCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 3 SVLPTMW-LGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 3 ~~~~tvw-iGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
.....++ .|..+|.|.+|+..+ .+.++.+..+..|.++.+. ++++|++.. +|.|.+| |+...+.+.
T Consensus 41 ~dg~~l~~~~~~d~~i~v~d~~~--~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~--------d~~~~~~~~ 110 (391)
T 1l0q_A 41 PDGTKVYVANAHSNDVSIIDTAT--NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVI--------DTTSNTVAG 110 (391)
T ss_dssp TTSSEEEEEEGGGTEEEEEETTT--TEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEE--------ETTTTEEEE
T ss_pred CCCCEEEEECCCCCeEEEEECCC--CeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEE--------ECCCCeEEE
Confidence 3445564 555899999999877 5778888888899999997 346877664 5999998 444444432
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
.-.....+.++... ++.||++++ +.|+++|..+.+..+.++.
T Consensus 111 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 111 TVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec
Confidence 11112467888877 467876655 6899999999998887753
No 51
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.48 E-value=2.3e-05 Score=58.65 Aligned_cols=106 Identities=15% Similarity=0.204 Sum_probs=81.3
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEeCC--------EEEEEecCCcEEEEEcCCCCCCCCCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQG--------RVVCALADGSVAIFRRGPDGQWDLSK 73 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~~--------~v~v~LanG~l~Vy~r~~~g~wd~~~ 73 (121)
.....+..|+.||.|.+|+... +++.++ ...+.|.++.+..+ .++.|..||+|.+| |+..
T Consensus 117 ~~~~~l~s~s~D~~i~vwd~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~w--------d~~~ 185 (319)
T 3frx_A 117 KKASMIISGSRDKTIKVWTIKG---QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAW--------NLNQ 185 (319)
T ss_dssp TTSCEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEE--------ETTT
T ss_pred CCCCEEEEEeCCCeEEEEECCC---CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEE--------ECCc
Confidence 3456788999999999999875 455555 35578999988653 68999999999997 5655
Q ss_pred ceEE-EeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 74 YHTV-TLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 74 ~~~i-~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.+.. .+.....+|+++... ++.|..|+. +.|++.|..+.+..+.++
T Consensus 186 ~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 186 FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 5443 343335899999987 466777776 689999999999888775
No 52
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.47 E-value=2.1e-05 Score=59.24 Aligned_cols=111 Identities=14% Similarity=0.133 Sum_probs=82.3
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceE-EE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHT-VT 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~ 78 (121)
.....+..|++||.|.||+... .+++..++.+ +.|.++.+.. +.+++|..||.+.+|+..... ..... ..
T Consensus 65 ~d~~~l~s~s~Dg~v~iWd~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~----~~~~~~~~ 138 (340)
T 1got_B 65 TDSRLLLSASQDGKLIIWDSYT--TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE----GNVRVSRE 138 (340)
T ss_dssp TTSSEEEEEETTTEEEEEETTT--CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS----BSCEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCC--CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC----CcceeEEE
Confidence 4556789999999999999887 4667777665 7899999874 578899999999999654321 11122 22
Q ss_pred eCCCCCceeEeeee-CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v-~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.....+|.|+... ++.+..|++ +.|.+.|.++.+..+.|+
T Consensus 139 ~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~ 181 (340)
T 1got_B 139 LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp EECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEc
Confidence 32223789998877 477877777 689999999998887764
No 53
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.47 E-value=4.9e-06 Score=62.27 Aligned_cols=106 Identities=16% Similarity=0.090 Sum_probs=77.0
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEe--------------cCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ--------------LKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPD 66 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~--------------l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~ 66 (121)
....+..|+.||.|.+|+.... +....+. +.++|.++.+.. +.+++|..||.|.+|
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iw----- 127 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENS--SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVW----- 127 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCC--SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEE-----
T ss_pred CCCEEEEEcCCCeEEEEECCCC--cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEe-----
Confidence 5678999999999999998874 2222222 557999999975 368888889999998
Q ss_pred CCCCCCCceEEEeCCCCCceeEeeeeC-----CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 67 GQWDLSKYHTVTLGLPHHSVRSLAAVY-----NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 67 g~wd~~~~~~i~lg~~~~pV~~m~~v~-----~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
|+.....+..-....++.++.... ..+.+|+. +.|.++|..+.+..+.+.
T Consensus 128 ---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 183 (408)
T 4a11_B 128 ---DTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ 183 (408)
T ss_dssp ---ETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC
T ss_pred ---eCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec
Confidence 555554432222236788877763 26777776 689999999988777664
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.46 E-value=8.7e-06 Score=60.42 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=77.7
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCce---E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYH---T 76 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~---~ 76 (121)
...+.+..|+.+|.|.+|+......+++..++ ++++|.++.+. ++.+++|..||.|.+|+ ++... .
T Consensus 18 ~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd--------~~~~~~~~~ 89 (372)
T 1k8k_C 18 KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT--------LKGRTWKPT 89 (372)
T ss_dssp TTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE--------EETTEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE--------CCCCeeeee
Confidence 45678999999999999998773222677775 55899999998 45799999999999984 43333 3
Q ss_pred EEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 77 VTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
+.+.....+|+++... ++.|.+|+. +.|.+.|.++.+
T Consensus 90 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 90 LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 3433345799999987 467888887 579998877765
No 55
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.46 E-value=5.1e-06 Score=62.50 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=74.8
Q ss_pred CCCCeEEEEecC---CeEEEEECCcccceeeeeEe--------------cCCCEEEEEEe--CCEEEEEecCCcEEEEEc
Q psy16019 3 SVLPTMWLGSQN---GSVFVHSAVSQWRRCLHSIQ--------------LKDSVLNIVHV--QGRVVCALADGSVAIFRR 63 (121)
Q Consensus 3 ~~~~tvwiGt~~---g~I~v~~~~~~~~~~l~~~~--------------l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r 63 (121)
.....+..|+++ |.|.+|+..+ .+++..+. ....|.++.+. +..+++|..||.|.+|
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw-- 318 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEF--GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW-- 318 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTT--CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE--
T ss_pred CCCCEEEEEecCCCCceEEEEECCC--CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE--
Confidence 346689999999 9999999887 46666665 45799999997 5588999999999998
Q ss_pred CCCCCCCCCCceEE-EeC------CC---------------CCceeEeeeeCC------------EEEEEeC-CeEEEEe
Q psy16019 64 GPDGQWDLSKYHTV-TLG------LP---------------HHSVRSLAAVYN------------KVWCGYK-NKIHVVD 108 (121)
Q Consensus 64 ~~~g~wd~~~~~~i-~lg------~~---------------~~pV~~m~~v~~------------~lw~~~g-n~I~Vi~ 108 (121)
|+...+.+ .+. .. ..+|+++....+ .|..|+. +.|.+.|
T Consensus 319 ------d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 319 ------DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp ------ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred ------EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 44444332 222 11 489999999854 5666666 6899999
Q ss_pred CCCCc
Q psy16019 109 PKSLD 113 (121)
Q Consensus 109 ~~tl~ 113 (121)
..+++
T Consensus 393 ~~~g~ 397 (397)
T 1sq9_A 393 EAGGK 397 (397)
T ss_dssp EEC--
T ss_pred cCCCC
Confidence 87753
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.46 E-value=2.8e-06 Score=62.37 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=75.4
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC-CEEEEEecCCcEEEEEcCCCCC-CCCCCceE-EEe
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ-GRVVCALADGSVAIFRRGPDGQ-WDLSKYHT-VTL 79 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~-~~v~v~LanG~l~Vy~r~~~g~-wd~~~~~~-i~l 79 (121)
.....+..|+.||.|.+|+... .+++..++.++.|.++.+.+ ++++++..||.|.+|+...... +.+..+.. ...
T Consensus 225 ~~~~~l~s~s~Dg~i~iwd~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 302 (340)
T 4aow_A 225 PDGSLCASGGKDGQAMLWDLNE--GKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSS 302 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTT--TEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC------
T ss_pred CCCCEEEEEeCCCeEEEEEecc--CceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeec
Confidence 4566888999999999999987 57788888889999999875 4788888999999985432110 11111111 111
Q ss_pred CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
.....+|.++... ++.|..|+. +.|+|.|.+|++
T Consensus 303 ~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 303 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 1124789999887 357787777 579999988874
No 57
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.45 E-value=1.1e-05 Score=61.60 Aligned_cols=106 Identities=10% Similarity=0.159 Sum_probs=78.6
Q ss_pred CCCCeEEEEe--------cCCeEEEEECCcccceeeeeEecCCCEEEEEEeC--CEEEEE-ecCCcEEEEEcCCCCCCCC
Q psy16019 3 SVLPTMWLGS--------QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ--GRVVCA-LADGSVAIFRRGPDGQWDL 71 (121)
Q Consensus 3 ~~~~tvwiGt--------~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~--~~v~v~-LanG~l~Vy~r~~~g~wd~ 71 (121)
.....+++++ ++|.|++|+..+ .+.+..+..++.+.++.+.. +.+|++ ..||.|.+|+ +
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d--------~ 332 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDK--EKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYD--------L 332 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTT--TEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEE--------T
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCC--CcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEE--------C
Confidence 4556889888 589999999887 45666667777888888874 367766 7899999984 4
Q ss_pred CCceEE-EeCCCCCceeEeeee--CCEEEEEeCC----------------eEEEEeCCCCcEEEEEE
Q psy16019 72 SKYHTV-TLGLPHHSVRSLAAV--YNKVWCGYKN----------------KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 72 ~~~~~i-~lg~~~~pV~~m~~v--~~~lw~~~gn----------------~I~Vi~~~tl~i~~~~~ 119 (121)
+..+.+ .+. ...++.++... ++.|++++.+ .|+++|..+++....++
T Consensus 333 ~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 333 KEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp TTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred CCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec
Confidence 444332 222 23577888877 4679998874 89999999999888775
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.45 E-value=1.6e-05 Score=60.92 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=78.1
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEec--CCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceE-EEeC
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQL--KDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHT-VTLG 80 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l--~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~lg 80 (121)
..+..|+.+|.|++|+..+ .+....+.. .+.|+++.+.. +.+++|..||.|.+|+ +...+. ..+.
T Consensus 104 ~~l~~~~~d~~v~lw~~~~--~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd--------~~~~~~~~~~~ 173 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADS--GSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD--------VESQTKLRTMA 173 (401)
T ss_dssp TSEEEEEETTEEEEEETTT--CCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE--------TTTCCEEEEEC
T ss_pred CCEEEEECCCeEEEeeCCC--CcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE--------CcCCeEEEEec
Confidence 4678899999999999887 345555554 57999999974 4899999999999984 444333 2443
Q ss_pred CCCCceeEeeeeCCEEEEEeC-CeEEEEeCCC-CcEEEEE
Q psy16019 81 LPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKS-LDVIRPV 118 (121)
Q Consensus 81 ~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~t-l~i~~~~ 118 (121)
....+|.++...++.+..|+. +.|.+.|..+ .+....+
T Consensus 174 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 213 (401)
T 4aez_A 174 GHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTL 213 (401)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEE
Confidence 345899999999999999888 6899999984 4444444
No 59
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.45 E-value=1.3e-05 Score=60.88 Aligned_cols=106 Identities=11% Similarity=0.119 Sum_probs=77.6
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC----------CCE-EEEEEeCCEEEEEecCCcEEEEEcCCCC-CCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK----------DSV-LNIVHVQGRVVCALADGSVAIFRRGPDG-QWDLS 72 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~----------~~V-~~i~~~~~~v~v~LanG~l~Vy~r~~~g-~wd~~ 72 (121)
.+.||+++.+|.|+.|+..+ -+.+++.+++ ..+ ......+++||++..+|.|..|+...+. .|.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~t--G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~-- 128 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADD--GKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQ-- 128 (376)
T ss_dssp TTEEEEECTTSEEEEEETTT--CCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEE--
T ss_pred CCEEEEEcCCCeEEEEEccC--CceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEE--
Confidence 56899999999999999876 4667777773 223 3456778999999999999999765432 243
Q ss_pred CceEEEeCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEe
Q psy16019 73 KYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 73 ~~~~i~lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~~ 120 (121)
..++. .........++.+|++.. +.|+.+|++|+++.-+++.
T Consensus 129 ----~~~~~--~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 129 ----TKVAG--EALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ----EECSS--CCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ----EeCCC--ceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 23333 222233456899999987 5799999999998877653
No 60
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.45 E-value=7.5e-06 Score=60.31 Aligned_cols=106 Identities=11% Similarity=0.124 Sum_probs=75.7
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC-----CEEEEEecCCcEEEEEcCCCCCCCCCCceEE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~-----~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.....+..|+++|.|++|+... .+......++..|.++.+.. +.+++|..||.|.+|+...... .......
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~ 253 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRN--MALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP--TKGFASV 253 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTT--TEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET--TTEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECcc--CceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc--ccceeee
Confidence 4567899999999999999987 45555567789999999964 7899999999999996543211 1111111
Q ss_pred EeCCCCCceeEeeeeC-C--EEEEEeC-CeEEEEeCCCC
Q psy16019 78 TLGLPHHSVRSLAAVY-N--KVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~-~--~lw~~~g-n~I~Vi~~~tl 112 (121)
.+.....+|+++.... + .++.|+. +.|.+.|..+.
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 2222348999999985 3 3666666 58999998764
No 61
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.44 E-value=8.9e-06 Score=60.18 Aligned_cols=106 Identities=14% Similarity=0.162 Sum_probs=76.1
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe----CCEEEEEecCCcEEEEEcCCCCCCCCCCceE
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~----~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
+.....+..|+.||.|.||+......+++.+++ +.++|.++.+. ++.++.|..||+|.+|+.... .|. .+
T Consensus 18 s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~-~~~----~~ 92 (297)
T 2pm7_B 18 DYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG-RWS----QI 92 (297)
T ss_dssp CTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS-CBC----CC
T ss_pred CCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC-ceE----EE
Confidence 345678899999999999998753345666774 55899999985 457888999999999865421 111 12
Q ss_pred EEeCCCCCceeEeeeeC----CEEEEEeC-CeEEEEeCCCC
Q psy16019 77 VTLGLPHHSVRSLAAVY----NKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v~----~~lw~~~g-n~I~Vi~~~tl 112 (121)
..+.....+|+++.... ..|..|+. +.|.+.|..+.
T Consensus 93 ~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 23333347999999873 46777777 68999998765
No 62
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.43 E-value=1.1e-05 Score=59.26 Aligned_cols=99 Identities=11% Similarity=0.071 Sum_probs=75.5
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEE--eC--CEEEEEecCCcEEEEEcCCCCCCCCCCc---e
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVH--VQ--GRVVCALADGSVAIFRRGPDGQWDLSKY---H 75 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~--~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~---~ 75 (121)
.....+..|+.||.|.+|+..+ .+.+....++++|.++.+ .. ..+++|..||.|.+| |+... .
T Consensus 96 ~~~~~l~s~~~dg~v~iwd~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw--------d~~~~~~~~ 165 (368)
T 3mmy_A 96 DDGSKVFTASCDKTAKMWDLSS--NQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW--------DTRSSNPMM 165 (368)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--TEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEE--------CSSCSSCSE
T ss_pred cCCCEEEEEcCCCcEEEEEcCC--CCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEE--------ECCCCcEEE
Confidence 3556899999999999999887 455666677899999998 43 358888999999998 44333 2
Q ss_pred EEEeCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcE
Q psy16019 76 TVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDV 114 (121)
Q Consensus 76 ~i~lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i 114 (121)
.+... .++.++....+.+.+++. +.+.+++..+...
T Consensus 166 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 202 (368)
T 3mmy_A 166 VLQLP---ERCYCADVIYPMAVVATAERGLIVYQLENQPS 202 (368)
T ss_dssp EEECS---SCEEEEEEETTEEEEEEGGGCEEEEECSSSCE
T ss_pred EEecC---CCceEEEecCCeeEEEeCCCcEEEEEeccccc
Confidence 33332 578888888888888777 6899999877543
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.43 E-value=2.3e-05 Score=59.45 Aligned_cols=106 Identities=20% Similarity=0.196 Sum_probs=76.6
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.....+..|+.||.|.+|+..+ .+++..++ +.++|.++.+.. ..++.|..||+|.+| |+...+.+ .
T Consensus 149 ~~~~~l~s~s~d~~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw--------d~~~~~~~~~ 218 (420)
T 3vl1_A 149 PSGEALISSSQDMQLKIWSVKD--GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW--------ECGTGTTIHT 218 (420)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE--------ETTTTEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCC--CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEe--------ECCCCceeEE
Confidence 3456899999999999999987 45666775 568999999974 479999999999998 44444332 2
Q ss_pred eC---CCCCceeEeee---------------------e--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 79 LG---LPHHSVRSLAA---------------------V--YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 79 lg---~~~~pV~~m~~---------------------v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
+. .+..+|.++.. . ++.|.+|+. +.|.++|..+.+....+
T Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 285 (420)
T 3vl1_A 219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQL 285 (420)
T ss_dssp ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEc
Confidence 22 12345555443 3 356777777 57999999998876665
No 64
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.42 E-value=2.6e-05 Score=57.13 Aligned_cols=103 Identities=10% Similarity=0.020 Sum_probs=75.4
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCC
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP 82 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~ 82 (121)
..+..|..|+.|.+|+... .+++..+. ..++|.++.+.. ..+++|..||+|.+| |+...+.+..-..
T Consensus 186 ~~~~s~~~d~~i~i~d~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iw--------d~~~~~~~~~~~~ 255 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW--------DLNEGKHLYTLDG 255 (340)
T ss_dssp CEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEE--------ETTTTEEEEEEEC
T ss_pred cEEEEEcCCCEEEEEECCC--CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEE--------EeccCceeeeecC
Confidence 4566788999999999887 45666664 458999999874 478889999999998 5555554322222
Q ss_pred CCceeEeeeeC-CE-EEEEeCCeEEEEeCCCCcEEEEE
Q psy16019 83 HHSVRSLAAVY-NK-VWCGYKNKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 83 ~~pV~~m~~v~-~~-lw~~~gn~I~Vi~~~tl~i~~~~ 118 (121)
..+|.++.... +. +.++..+.|.+.|.++......+
T Consensus 256 ~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 256 GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEec
Confidence 36899888874 33 44455589999999988776655
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.41 E-value=3.4e-06 Score=62.18 Aligned_cols=107 Identities=19% Similarity=0.207 Sum_probs=77.0
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecC-----CCEEEEEE------eCCEEEEEecCCcEEEEEcCCCCCCCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-----DSVLNIVH------VQGRVVCALADGSVAIFRRGPDGQWDL 71 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-----~~V~~i~~------~~~~v~v~LanG~l~Vy~r~~~g~wd~ 71 (121)
...+.+..|+.||.|.+|+.... ++.+..++.+ ..|.++.+ .++.+++|..||.|.+| |+
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~--------d~ 197 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQK-DDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLF--------DL 197 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSC-SSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEE--------ET
T ss_pred CCccEEEEEeCCCeEEEEeCCCC-CCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEE--------EC
Confidence 45668999999999999998873 1245555432 38888883 46688889999999998 55
Q ss_pred CCceEEEeCCCCCceeEeeee-----CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 72 SKYHTVTLGLPHHSVRSLAAV-----YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 72 ~~~~~i~lg~~~~pV~~m~~v-----~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
...+.+.......+|.++... ++.+++|+. +.|.++|..+.+..+.+
T Consensus 198 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 198 RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 555554332224799999986 377888876 68999998876654443
No 66
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.41 E-value=2.6e-05 Score=59.38 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=79.6
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-EeC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLG 80 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~lg 80 (121)
.+.+..|+.||.|.+|+..+ .+++..+. +++.|.++.+. ++.+++|..||+|.+| |+...+.+ .+.
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~--~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lw--------d~~~~~~~~~~~ 279 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRS--GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLY--------DLRADREVAIYS 279 (354)
T ss_dssp CCEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--------ETTTTEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCC--CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEE--------ECCCCcEEEEEc
Confidence 46899999999999999887 56777775 45899999996 4588999999999998 55444333 222
Q ss_pred C--CCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 81 L--PHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 81 ~--~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
. ...++.++... +..|.+|+. +.|.+.|..+.+....+
T Consensus 280 ~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l 322 (354)
T 2pbi_B 280 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL 322 (354)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEE
Confidence 2 23578888776 577888887 58999999988876655
No 67
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.40 E-value=8.1e-06 Score=65.11 Aligned_cols=100 Identities=10% Similarity=0.116 Sum_probs=78.2
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH 83 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~~ 83 (121)
.+.|++| ++|.|++|++.+.. ...+. .+..+|.+++...+.++++++||+|.+| |+++....++.
T Consensus 97 ~~~L~v~-~~~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~--------dl~~~~~~~~~--- 162 (388)
T 1xip_A 97 GDQVLVS-TRNALYSLDLEELS--EFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSAL--------DLRTKSTKQLA--- 162 (388)
T ss_dssp TTEEEEE-ESSEEEEEESSSTT--CEEEEEECSSCEEEEEECSSEEEEEETTSEEEEE--------ETTTCCEEEEE---
T ss_pred CCEEEEE-cCCcEEEEEchhhh--ccCccceeecceeeEEecCCCEEEEECCCCEEEE--------EccCCcccccc---
Confidence 4689999 88999999988743 22222 3345688999888789999999999998 55555455553
Q ss_pred CceeEeeeeCCEEEEEeC-CeEEEEeCCCCcE--EEEE
Q psy16019 84 HSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDV--IRPV 118 (121)
Q Consensus 84 ~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i--~~~~ 118 (121)
..|+|++...+.+.+|++ ++|.++++++.++ ++.+
T Consensus 163 ~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I 200 (388)
T 1xip_A 163 QNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEF 200 (388)
T ss_dssp ESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred CCceEEEEcCCceEEEEcCCcEEEEcCCCcccccccee
Confidence 489999999877999999 6899999998887 5555
No 68
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.40 E-value=5.1e-06 Score=63.86 Aligned_cols=107 Identities=14% Similarity=0.138 Sum_probs=77.7
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEec--CCCEEEEEEeCC------EEEEEecCCcEEEEEcCCCCCCCCCCc
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL--KDSVLNIVHVQG------RVVCALADGSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l--~~~V~~i~~~~~------~v~v~LanG~l~Vy~r~~~g~wd~~~~ 74 (121)
.....+..|++||.|.+|+... .+++.++.+ ..+|.++..... .+++|..||+|.+|+.. ..
T Consensus 224 ~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~--------~~ 293 (437)
T 3gre_A 224 EECCVLILGTTRGIIDIWDIRF--NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV--------KG 293 (437)
T ss_dssp TTSCEEEEEETTSCEEEEETTT--TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT--------TT
T ss_pred CCCCEEEEEcCCCeEEEEEcCC--ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC--------CC
Confidence 4567899999999999999987 577777754 368999977643 78888899999998543 22
Q ss_pred eE---EE----------------------e-C-CCCCceeEeeeeCCE-EEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 75 HT---VT----------------------L-G-LPHHSVRSLAAVYNK-VWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 75 ~~---i~----------------------l-g-~~~~pV~~m~~v~~~-lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+. +. + + ....+|+++...++. |..|+. +.|++.|..+.+..+.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 294 HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEe
Confidence 22 11 0 0 023579999998765 444444 789999999988776654
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.39 E-value=6.9e-06 Score=60.45 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=75.5
Q ss_pred CCeEEEEecCCeEEEEECCccc-------ceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQW-------RRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~-------~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.+.+..|+.||.|.+|+..... .+++..+.+++.|.++.+.++.+++|..||.|.+|+....+. ......
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~ 188 (342)
T 1yfq_A 112 DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED---DNGTIE 188 (342)
T ss_dssp TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTT---CCCEEE
T ss_pred CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCcccc---ccceee
Confidence 5688999999999999976410 245666677899999999999999999999999996543110 112223
Q ss_pred EeCCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCC
Q psy16019 78 TLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl 112 (121)
... ...+|+++.... +.+++|+. +.|.+.+..+.
T Consensus 189 ~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 189 ESG-LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp ECS-CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred ecC-CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 332 247899998864 67777777 57888777665
No 70
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.39 E-value=3.2e-06 Score=63.60 Aligned_cols=106 Identities=7% Similarity=-0.041 Sum_probs=73.9
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeE--ecCCCEEEEEEeCC--EEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSI--QLKDSVLNIVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~--~l~~~V~~i~~~~~--~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
....+..|+.||.|.+|+... .+++... ....+|.++.++.+ .+.+|..||.|.+|+...... .+..+..
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~--~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~----~~~~~~~ 211 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYED--DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ----ASSRFPV 211 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSS--SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS----CCEECCC
T ss_pred CCCEEEEEeCCCcEEEEECCC--CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC----CccEEec
Confidence 445777899999999999887 3444443 23457999998743 566678999999985432210 0123333
Q ss_pred CCCCCceeEeeee--CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLDVIR 116 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~tl~i~~ 116 (121)
+ ...||+++... +..|..|+.+.|.+.|..+.+..+
T Consensus 212 ~-h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 212 D-EEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTL 249 (343)
T ss_dssp C-TTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCB
T ss_pred c-CCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcce
Confidence 1 24899999987 467888887899999999876543
No 71
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.39 E-value=2.5e-05 Score=59.34 Aligned_cols=106 Identities=12% Similarity=0.096 Sum_probs=78.6
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCC-CCCCCCceEEEeCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH 83 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g-~wd~~~~~~i~lg~~~ 83 (121)
.+.+|+|+.+|.|+.++..+ -+.+++...+. ...+...++.+|++..+|.|..|+...+. .|..+. ++.
T Consensus 239 ~~~v~~~~~~g~l~~~d~~t--G~~~w~~~~~~-~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~-----~~~-- 308 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRS--GQIMWKRELGS-VNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSD-----LLH-- 308 (376)
T ss_dssp TTEEEEECTTSCEEEEETTT--CCEEEEECCCC-EEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECT-----TTT--
T ss_pred CCEEEEEecCcEEEEEECCC--CcEEeeccCCC-CCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecc-----cCC--
Confidence 46899999999999999876 35667665543 45677789999999999999999765432 243221 111
Q ss_pred CceeEeeeeCCEEEEEeCC-eEEEEeCCCCcEEEEEEe
Q psy16019 84 HSVRSLAAVYNKVWCGYKN-KIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 84 ~pV~~m~~v~~~lw~~~gn-~I~Vi~~~tl~i~~~~~~ 120 (121)
..+....+.++.||++..+ .++++|++|+++..++++
T Consensus 309 ~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 309 RLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp SCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 2334455678999999985 799999999999877764
No 72
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.39 E-value=2e-05 Score=61.13 Aligned_cols=106 Identities=15% Similarity=0.118 Sum_probs=80.0
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC----------------------CEEEEEecCCcEEE
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ----------------------GRVVCALADGSVAI 60 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~----------------------~~v~v~LanG~l~V 60 (121)
....+..|+.||.|.+|+... .++...+. ++..|.|+.+.. ..+++|..||+|.+
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVAT--KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp TSSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCC--CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 456788999999999999877 46666664 457999999864 36899999999999
Q ss_pred EEcCCCCCCCCCCceE-EEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 61 FRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 61 y~r~~~g~wd~~~~~~-i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
| |+..... ..+.....+|+++... +..|..|+. +.|++.|..+.+..+.+.
T Consensus 323 w--------d~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 323 W--------DVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp E--------ETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred E--------ECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 8 5544433 2332224799999887 356777776 579999999988777764
No 73
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.38 E-value=2.7e-05 Score=59.88 Aligned_cols=105 Identities=15% Similarity=0.211 Sum_probs=78.5
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceE-EE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHT-VT 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~ 78 (121)
.....+..|++||.|.||+... .+.+..++ +.+.|.++.+. ++.++.|..||++.+| |+...+. ..
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iw--------d~~~~~~~~~ 202 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIEN--RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW--------DLRTGQCSLT 202 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE--------ETTTTEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCC--CcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEE--------ECCCCeeEEE
Confidence 3456788999999999999887 46666665 45799999987 4589999999999998 5544433 22
Q ss_pred eCCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 79 LGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 79 lg~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
+.. ..+++++.... +.|..|+. +.|.+.|..+.+..+.+
T Consensus 203 ~~~-~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 203 LSI-EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 245 (393)
T ss_dssp EEC-SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEc-CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEee
Confidence 322 25788888763 55666666 68999999998877665
No 74
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.38 E-value=5.2e-05 Score=57.68 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=78.2
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC----CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTV- 77 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~----~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i- 77 (121)
....+..|+.||.|.+|+..+ .+++.++. +...|.++.... +.++.|..||+|.+| |+...+.+
T Consensus 165 ~~~~l~t~s~D~~v~lwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w--------d~~~~~~~~ 234 (354)
T 2pbi_B 165 SDMQILTASGDGTCALWDVES--GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW--------DMRSGQCVQ 234 (354)
T ss_dssp SSSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE--------ETTTCCEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCC--CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE--------ECCCCcEEE
Confidence 345788999999999999987 56777776 457899988753 578999999999998 44444332
Q ss_pred EeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEE
Q psy16019 78 TLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRP 117 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~ 117 (121)
.+.....+|+++... ++.|..|+. +.|.+.|..+.+....
T Consensus 235 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 235 AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 343334899999887 467777776 5899999988765443
No 75
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.37 E-value=9.7e-06 Score=61.92 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=80.9
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCceE--
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHT-- 76 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-- 76 (121)
+....+..|+.||.|.+|+... .+++..++- .+.|.++.+.. ..+..+..||+|.+| |+...+.
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~~--~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~w--------d~~~~~~~~ 218 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLSQ--KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLW--------DTRKPKPAT 218 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEEC--------CTTSSSCBC
T ss_pred CCCCEEEEEeCCCeEEEEECCC--CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEE--------ECCCCceee
Confidence 4566888999999999999887 577777764 47999999863 357788899999996 5555433
Q ss_pred -EEeCCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 77 -VTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 77 -i~lg~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.......++.++.... ..|.+|+. +.|.++|..+.+..+.++
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC
T ss_pred eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe
Confidence 23333357889988762 45677776 579999999998887765
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.36 E-value=3.1e-05 Score=57.37 Aligned_cols=117 Identities=10% Similarity=0.029 Sum_probs=82.0
Q ss_pred CCCCeEEEEecCCeEEEEECCcccce-eeeeEe--cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCC--------CCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRR-CLHSIQ--LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPD--------GQW 69 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~-~l~~~~--l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~--------g~w 69 (121)
.....+..|+++|.|.+|+....... ....+. +.+.|.++.+.. +.+++|..||.|.+|+-... ..|
T Consensus 106 ~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 185 (372)
T 1k8k_C 106 PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 185 (372)
T ss_dssp TTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTT
T ss_pred CCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccccccc
Confidence 45668999999999999997763221 233332 347999999974 47888999999999974211 122
Q ss_pred CC--CCc-eEEEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 70 DL--SKY-HTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 70 d~--~~~-~~i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.. ... ....+.....+|.++... ++.|++|+. +.|.++|..+.+..+.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 186 GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp BSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred ccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 21 122 233444445799999886 467888887 589999999999888775
No 77
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.36 E-value=3.8e-05 Score=56.89 Aligned_cols=106 Identities=15% Similarity=0.104 Sum_probs=78.0
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe--cCCCEEEEEEe----CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ--LKDSVLNIVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV- 77 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~--l~~~V~~i~~~----~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i- 77 (121)
...+..|+.||.|.+|+.... ++...+. ....|.++.+. +..++.|..||+|.+| |+...+.+
T Consensus 153 ~~~l~sgs~D~~v~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW--------d~~~~~~~~ 222 (304)
T 2ynn_A 153 PSTFASGCLDRTVKVWSLGQS--TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW--------DYQTKSCVA 222 (304)
T ss_dssp TTEEEEEETTSEEEEEETTCS--SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEE--------ETTTTEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCC--CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEE--------eCCCCccce
Confidence 457889999999999998763 3333333 23578888775 3479999999999997 56555443
Q ss_pred EeCCCCCceeEeeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEEe
Q psy16019 78 TLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~--~~lw~~~g-n~I~Vi~~~tl~i~~~~~~ 120 (121)
++.....+|.++.... ..|..|+. +.|.+.|..+++.++.++.
T Consensus 223 ~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 268 (304)
T 2ynn_A 223 TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC
Confidence 3433348999988774 56777776 5899999999999988753
No 78
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.35 E-value=1.6e-05 Score=60.94 Aligned_cols=99 Identities=16% Similarity=0.138 Sum_probs=72.9
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEeCC---EEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCC
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL 81 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~~---~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~ 81 (121)
..+..|++||.|.+|+... .+++++++- .++|.++.+..+ .+..|..||+|.|| |+...+++.+..
T Consensus 228 ~~l~sg~~dg~v~~wd~~~--~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vw--------d~~~~~~~~~~~ 297 (344)
T 4gqb_B 228 EVFVFGDENGTVSLVDTKS--TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVL--------DSSLSELFRSQA 297 (344)
T ss_dssp TEEEEEETTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEE--------CTTCCEEEEECC
T ss_pred cceEEeccCCcEEEEECCC--CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEE--------ECCCCcEEEEcC
Confidence 4567899999999999987 577888864 589999999742 46678899999997 666777776654
Q ss_pred CCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcE
Q psy16019 82 PHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDV 114 (121)
Q Consensus 82 ~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i 114 (121)
-..+|+++... +..|.+++| +.|++-+..+-.+
T Consensus 298 H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 298 HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 45899999986 455666555 6898888766544
No 79
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.35 E-value=2e-05 Score=61.37 Aligned_cols=109 Identities=15% Similarity=0.063 Sum_probs=80.6
Q ss_pred CCCCeEEEEecCCeEEEEECCcccce--eeeeEe-cCCCEEEEEEeCC-----EEEEEecCCcEEEEEcCCCCCCCCCCc
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRR--CLHSIQ-LKDSVLNIVHVQG-----RVVCALADGSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~--~l~~~~-l~~~V~~i~~~~~-----~v~v~LanG~l~Vy~r~~~g~wd~~~~ 74 (121)
.....+..|+.+|.|++|+..+.... +...+. ..+.|.++.+..+ .+++|..||+|.+|+ +...
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd--------~~~~ 230 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISH--------YPQC 230 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEE--------ESCT
T ss_pred CCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEE--------CCCC
Confidence 45678999999999999998763211 333443 4589999998865 789999999999984 3333
Q ss_pred eEE-E-eCCCCCceeEeeee-CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 75 HTV-T-LGLPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 75 ~~i-~-lg~~~~pV~~m~~v-~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.+ . +.....+|+++... ++.|+.|+. +.|.+.|..+++..+.++
T Consensus 231 ~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp TCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred ceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 222 2 21224799999886 567777776 689999999999888876
No 80
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.35 E-value=4.9e-06 Score=61.35 Aligned_cols=101 Identities=8% Similarity=0.107 Sum_probs=67.6
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCC-CEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKD-SVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP 82 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~-~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~ 82 (121)
.+.+|+|+.+|.|+.|+... +.+++...+. .+.++... ++.+|+|..+|.|..|+....-.| ...+..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g---~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~------~~~~~~- 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDG---TEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKW------RFKTND- 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTTS---CEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEE------EEECSS-
T ss_pred CCEEEEEecCCEEEEEcCCC---CEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeE------EEecCC-
Confidence 56899999999999999763 3455555553 34445554 778999999999999855410112 123333
Q ss_pred CCceeEeeee-CCEEEEEeCCeEEEEeCCCCcEEEEE
Q psy16019 83 HHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 83 ~~pV~~m~~v-~~~lw~~~gn~I~Vi~~~tl~i~~~~ 118 (121)
..+.++... ++.||+|+ +.|+.+| .+++...++
T Consensus 177 -~~~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~ 210 (330)
T 3hxj_A 177 -AITSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNF 210 (330)
T ss_dssp -CCCSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEE
T ss_pred -CceeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEE
Confidence 456666663 67888888 8888888 566555443
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.34 E-value=1.4e-05 Score=67.05 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=78.8
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe----CCEEEEEecCCcEEEEEcCCCCCCCCCCc--
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKY-- 74 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~----~~~v~v~LanG~l~Vy~r~~~g~wd~~~~-- 74 (121)
+...+.+..|+.||.|.||+......+.+.+++ +.++|.++.+. .+.+++|..||+|.+|+ +...
T Consensus 18 s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd--------~~~~~~ 89 (753)
T 3jro_A 18 DYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK--------EENGRW 89 (753)
T ss_dssp CSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE--------EETTEE
T ss_pred CCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE--------CCCCcc
Confidence 345668999999999999998753345666665 55899999986 56899999999999984 3333
Q ss_pred -eEEEeCCCCCceeEeeee----CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 75 -HTVTLGLPHHSVRSLAAV----YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 75 -~~i~lg~~~~pV~~m~~v----~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
....+.....+|+|+... ++.+..|+. +.|.+.|..+..
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 233444345899999987 457777777 689999998763
No 82
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.33 E-value=4.5e-05 Score=56.25 Aligned_cols=107 Identities=16% Similarity=0.190 Sum_probs=76.5
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecC-----CCEEEEEEe--CCEEEEEecC-CcEEEEEcCCCCCCCCCCc
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-----DSVLNIVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-----~~V~~i~~~--~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~ 74 (121)
.....++++.+++.|++|+..+ .+.++.+..+ ..+.++.+. ++++|++..+ |.|.+|+.... +..
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-----~~~ 266 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTAD--NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG-----NIL 266 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTT--TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC-----CEE
T ss_pred CCCCEEEEEcCCCeEEEEECCC--CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC-----cEE
Confidence 4567899999999999999887 4666677662 356677776 5579998876 89999854321 112
Q ss_pred eEEEeCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 75 HTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 75 ~~i~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
+.+.++. | ..+... ++.+|++++ +.|.++|..++++...++.
T Consensus 267 ~~~~~~~---~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 267 AKVAAPE---S-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp EEEECSS---C-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEcCC---C-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec
Confidence 3355544 3 234444 578999985 7899999999999887764
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.32 E-value=5.7e-05 Score=58.32 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=75.7
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEecC---CCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK---DSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV- 77 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~---~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i- 77 (121)
..+.|-+|. |+.|+||++.+ .++++.+++. +.|+|+.+.. +.+++|..||+|.+| |++..+.+
T Consensus 115 ~~n~lAvgl-d~tV~lWd~~t--g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iW--------d~~~~~~~~ 183 (420)
T 4gga_A 115 SGNVLAVAL-DNSVYLWSASS--GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLW--------DVQQQKRLR 183 (420)
T ss_dssp TTSEEEEEE-TTEEEEEETTT--CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEE--------ETTTTEEEE
T ss_pred CCCEEEEEe-CCEEEEEECCC--CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEE--------EcCCCcEEE
Confidence 356788887 79999999887 4566666653 5899999974 589999999999997 56555543
Q ss_pred EeCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCC
Q psy16019 78 TLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl 112 (121)
.+.....++.|+...+..|..|+. ..+.+.|..+.
T Consensus 184 ~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 184 NMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp EECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSS
T ss_pred EEeCCCCceEEEeeCCCEEEEEeCCCceeEeeeccc
Confidence 343335889999999999988888 57888887763
No 84
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.32 E-value=1.4e-05 Score=61.09 Aligned_cols=110 Identities=17% Similarity=0.091 Sum_probs=77.6
Q ss_pred eEEEEecCCeEEEEECCcccc--eeeeeEe-cCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCC-CCC-CCceEEE
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWR--RCLHSIQ-LKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQ-WDL-SKYHTVT 78 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~--~~l~~~~-l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~-wd~-~~~~~i~ 78 (121)
.+|.|+.+|.|.||+....-+ +....+. +.++|+++.+.. +.+++|..||+|.+|+...++. ... .....+.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 128 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE 128 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec
Confidence 344588999999999866322 2333443 458999999964 6899999999999997665432 111 1223344
Q ss_pred eCCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 79 LGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 79 lg~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
-.. .+|+++.... +.|..|+. +.|.+.|..+.+..+.+
T Consensus 129 ~h~--~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 170 (402)
T 2aq5_A 129 GHT--KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTL 170 (402)
T ss_dssp CCS--SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCC--CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEE
Confidence 333 8999999884 35666666 68999999999888776
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.31 E-value=4e-05 Score=63.12 Aligned_cols=107 Identities=14% Similarity=0.104 Sum_probs=80.5
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceE-E
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHT-V 77 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i 77 (121)
++..+.+..|+.+|.|.||+..+ .+.+.++. .+++|.++.+.. +.+.+|..||.|.||+. ++.+. .
T Consensus 22 sp~~~~la~~~~~g~v~iwd~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~--------~~~~~~~ 91 (814)
T 3mkq_A 22 HPTEPWVLTTLYSGRVEIWNYET--QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY--------NTGEKVV 91 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET--------TTCCEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCC--CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC--------CCCcEEE
Confidence 45677899999999999999877 46677776 458999999874 57999999999999843 33322 2
Q ss_pred EeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCC-cEEEEE
Q psy16019 78 TLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSL-DVIRPV 118 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl-~i~~~~ 118 (121)
.+.....+|+++... +..|..|+. +.|.+.|..+. ...+.+
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE
T ss_pred EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE
Confidence 333234899999988 356887777 58999998876 554444
No 86
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.31 E-value=2.6e-05 Score=57.68 Aligned_cols=104 Identities=15% Similarity=0.090 Sum_probs=75.7
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC----CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~----~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
...+..|+.||.|.+|+..+...+.+..+. .+++|.++.+.. +.+++|..||.|.+|+..... ....+.+
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-----~~~~~~~ 143 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-----TTSPIII 143 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS-----CCCEEEE
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC-----ceeeEEe
Confidence 578999999999999998874223555554 458999999984 479999999999999654322 1223333
Q ss_pred CCCCCceeEeeeeC---------------CEEEEEeC-CeEEEEeCCCCc
Q psy16019 80 GLPHHSVRSLAAVY---------------NKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 80 g~~~~pV~~m~~v~---------------~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
.....+|+++.... +.+.+|+. +.|++.|..+.+
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC
Confidence 33348999998764 56777776 589999987754
No 87
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.30 E-value=3.9e-05 Score=63.13 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=80.1
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL 81 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~ 81 (121)
++.+..|+.||.|.+|+... .++..++. +.+.|.++.++. ..+..|..||+|.+| |+.+.+.+.--.
T Consensus 531 ~~~l~s~s~d~~v~vwd~~~--~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw--------d~~~~~~~~~~~ 600 (694)
T 3dm0_A 531 QPTIVSASWDKTVKVWNLSN--CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW--------DLAEGKKLYSLE 600 (694)
T ss_dssp SCEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEE--------ETTTTEEEECCB
T ss_pred cceEEEEeCCCeEEEEECCC--CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE--------ECCCCceEEEec
Confidence 45789999999999999887 45666664 458999999974 478888999999997 565555442222
Q ss_pred CCCceeEeeeeC--CEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16019 82 PHHSVRSLAAVY--NKVWCGYKNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 82 ~~~pV~~m~~v~--~~lw~~~gn~I~Vi~~~tl~i~~~~~ 119 (121)
...+|+++.... ..|.++..+.|.+.|.++.++.+.+.
T Consensus 601 ~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 601 ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLK 640 (694)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEC
T ss_pred CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhc
Confidence 247899988874 44566666899999999999887764
No 88
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.30 E-value=1.2e-05 Score=62.65 Aligned_cols=101 Identities=11% Similarity=0.072 Sum_probs=71.4
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEe---CCEEEEEecCCcEEEEEcCCCCCCCCCCceE--EE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHT--VT 78 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~---~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~--i~ 78 (121)
...|-.|+.||.|.||+.......+...+ .+.++|++|.++ .+.++.|..||+|.+| |++.... +.
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw--------d~~~~~~~~~~ 203 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ--------DFKGNILRVFA 203 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE--------ETTSCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe--------eccCCceeEEe
Confidence 44788999999999999876423333333 355899999986 3589999999999997 5544433 22
Q ss_pred eCC-CCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 79 LGL-PHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 79 lg~-~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
-+. ...++.++... ++.|..|+. +.|++.|.++.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 204 SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB
T ss_pred ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce
Confidence 222 24567788776 467777777 589999987543
No 89
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.26 E-value=2.8e-05 Score=59.38 Aligned_cols=97 Identities=13% Similarity=0.002 Sum_probs=70.8
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG 80 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg 80 (121)
...+..|++||.|.+|+... .++++++..+ ++|.++.+.. ..+..|..||+|.|| |++..+.+..-
T Consensus 239 ~~~la~g~~d~~i~~wd~~~--~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw--------d~~~~~~~~~~ 308 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKN--PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL--------DADFSEVFRDL 308 (357)
T ss_dssp TTEEEEEESSSCEEEEESSC--GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE--------CTTSCEEEEEC
T ss_pred cceEEEeecccceeEEECCC--CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE--------ECCCCcEeEEC
Confidence 34677899999999999887 4667777644 7999999873 246678889999997 66666665432
Q ss_pred CCCCceeEeeee--C-CEEEEEeC-CeEEEEeCCC
Q psy16019 81 LPHHSVRSLAAV--Y-NKVWCGYK-NKIHVVDPKS 111 (121)
Q Consensus 81 ~~~~pV~~m~~v--~-~~lw~~~g-n~I~Vi~~~t 111 (121)
.-..+|++++.. + +.|..|+. +.|++.+..+
T Consensus 309 ~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 309 SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 224899999976 3 44554444 6899999765
No 90
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.26 E-value=8.5e-05 Score=58.73 Aligned_cols=105 Identities=16% Similarity=0.154 Sum_probs=76.7
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.....+..|++||.|.+|+... +.++.+. ++++|+++.+.. ..+.++..||+|.+|+. +......+
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~--------~~~~~~~~ 463 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR--------NGQLLQTL 463 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTTC---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET--------TSCEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCC---CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC--------CCCEEEEE
Confidence 4456788999999999999654 5566664 458999999874 47888999999999853 33333333
Q ss_pred CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.....+|+++... ++.|..|+. ..|++.|. +.+..+.|+
T Consensus 464 ~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~ 505 (577)
T 2ymu_A 464 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 505 (577)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe
Confidence 3334899999987 356777777 57999995 677777665
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.26 E-value=6.1e-05 Score=56.23 Aligned_cols=101 Identities=9% Similarity=0.012 Sum_probs=75.9
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC-----CEEEEEecCCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~-----~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
....+..|+.||.|.+|+... .+....+.++..+.++.+.. ..+++|..||.|.+|+.... .... .
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-----~~~~--~ 181 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNT--LQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-----SCSH--I 181 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTT--TEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS-----CCCE--E
T ss_pred CCcEEEEEeCCCeEEEeeCCC--CccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-----ceee--e
Confidence 345788999999999999988 56778888889999999864 27999999999999954321 1122 3
Q ss_pred eCCCCCceeEeeeeC--C-EEEEEeC-CeEEEEeCCCCc
Q psy16019 79 LGLPHHSVRSLAAVY--N-KVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 79 lg~~~~pV~~m~~v~--~-~lw~~~g-n~I~Vi~~~tl~ 113 (121)
+.....+|+++.... + -+.+|+. +.|.+.|..+.+
T Consensus 182 ~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 182 LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 333348999999885 3 3666766 689999997754
No 92
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.25 E-value=4e-06 Score=62.97 Aligned_cols=107 Identities=15% Similarity=0.135 Sum_probs=72.6
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.....+..|++||.|.+|+......+++..++ +.++|.++.+.. ++++.|..||+|.+|+......| .....+
T Consensus 21 ~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~----~~~~~~ 96 (377)
T 3dwl_C 21 SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW----KQTLVL 96 (377)
T ss_dssp SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC----CCEEEC
T ss_pred CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce----eeeeEe
Confidence 45667888999999999998863225666664 458999999974 47888999999999844322100 123444
Q ss_pred CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
.....+|+++... ++.|..|+. +.|.+.|.++.+
T Consensus 97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 97 LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 4445899999987 466777777 579999988876
No 93
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.24 E-value=1.3e-05 Score=60.42 Aligned_cols=116 Identities=16% Similarity=0.037 Sum_probs=80.0
Q ss_pred CCCCeEEEEecCCeEEEEECCccc--ceeeeeEe-cCCCEEEEEEe---CCEEEEEecCCcEEEEEcCCCCCCCCCCceE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQW--RRCLHSIQ-LKDSVLNIVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~--~~~l~~~~-l~~~V~~i~~~---~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
.....+..|++||.|.+|+..... .+++..+. +.++|.++.+. ++.+++|..||+|.+|+...... ....+..
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~ 155 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTE-SPSNYTP 155 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSS-CTTTCCC
T ss_pred CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcc-ccccccc
Confidence 455688999999999999987621 23455554 55899999997 45788999999999985543220 0000012
Q ss_pred EEe---CCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 77 VTL---GLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 77 i~l---g~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
+.+ .....+|+++.... ..+..|+. +.|.+.|..+.+....++
T Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 156 LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 222 22247999999884 35666655 579999999998887765
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.23 E-value=1.8e-05 Score=61.60 Aligned_cols=108 Identities=15% Similarity=0.093 Sum_probs=75.8
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
....+..|++||.|.+|+... +++.+++. .+.|.++.++. ..+..|..||+|.+|....... ....+..
T Consensus 220 ~~~~l~~g~~dg~i~~wd~~~---~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~----~~~~~~~ 292 (435)
T 4e54_B 220 SSRMVVTGDNVGNVILLNMDG---KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG----KASFLYS 292 (435)
T ss_dssp TTTEEEEECSSSBEEEEESSS---CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS----SSCCSBC
T ss_pred CCCEEEEEeCCCcEeeeccCc---ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccc----cceEEEe
Confidence 456889999999999999875 45566654 58999999873 2466788999999985432210 0011111
Q ss_pred CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
.....+|+++... ++.|..|+. +.|.+.|..+++....+
T Consensus 293 ~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 293 LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred eeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 1114799999876 467877777 68999999998876654
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.22 E-value=3.6e-05 Score=58.05 Aligned_cols=108 Identities=11% Similarity=0.109 Sum_probs=79.3
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEec-------CCCEEEEEEeCC---EEEEEecCC---cEEEEEcCCCCCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-------KDSVLNIVHVQG---RVVCALADG---SVAIFRRGPDGQWDL 71 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-------~~~V~~i~~~~~---~v~v~LanG---~l~Vy~r~~~g~wd~ 71 (121)
...+..|+.+|.|.+|+... .+++..+.. ..+|.++.+..+ .++++..|| .|.+|+.....
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~---- 251 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKA--KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN---- 251 (416)
T ss_dssp TTEEEEESSSSCEEEEETTT--TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT----
T ss_pred CcEEEEEcCCCCEEEEECCC--CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC----
Confidence 46788999999999999987 466666655 568999999853 688888888 99998654321
Q ss_pred CCceEEEeCCCCCceeEeeee---CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 72 SKYHTVTLGLPHHSVRSLAAV---YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 72 ~~~~~i~lg~~~~pV~~m~~v---~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.....+.. ....+|+++... ++.|..|+. +.|.+.|..+.+..+.++
T Consensus 252 ~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 252 TPLQTLNQ-GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp SCSBCCCS-CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred CCcEEeec-CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 11122221 223799999885 356777766 689999999999888775
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=7.2e-05 Score=58.25 Aligned_cols=104 Identities=16% Similarity=0.134 Sum_probs=75.4
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEecC--------------------------CCEEEEEEe--CCEEEEEe-c
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK--------------------------DSVLNIVHV--QGRVVCAL-A 54 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~--------------------------~~V~~i~~~--~~~v~v~L-a 54 (121)
....+..|+.||.|.+|+... .+++..++++ .+|.+|.+. +..++++. .
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~ 328 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKT--GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA 328 (450)
T ss_dssp STTEEEEEESSSEEEEEETTT--CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCC--CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC
Confidence 456889999999999999887 4556666532 468888887 45788888 8
Q ss_pred CCcEEEEEc--CCCCCCCCCCceEEEeCCCCCceeEeeeeCCEEEEEeCC-----------eEEEEeCCCCcE
Q psy16019 55 DGSVAIFRR--GPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN-----------KIHVVDPKSLDV 114 (121)
Q Consensus 55 nG~l~Vy~r--~~~g~wd~~~~~~i~lg~~~~pV~~m~~v~~~lw~~~gn-----------~I~Vi~~~tl~i 114 (121)
||.|.+|+. ..++ .+.....+... .+|+++....+.++++.++ +|+.++.++.+.
T Consensus 329 d~~i~iw~~~~~~~~--~l~~~~~~~~~---~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~ 396 (450)
T 2vdu_B 329 TKCIIILEMSEKQKG--DLALKQIITFP---YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSF 396 (450)
T ss_dssp CSEEEEEEECSSSTT--CEEEEEEEECS---SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEE
T ss_pred CCeEEEEEeccCCCC--ceeeccEeccC---CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeE
Confidence 999999976 2221 11222233332 6899999999999998765 788888877655
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.21 E-value=0.0002 Score=51.80 Aligned_cols=97 Identities=16% Similarity=0.232 Sum_probs=71.3
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC---CCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK---DSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~---~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.+.|-+|. |+.|.||+..+ .++++.++++ +.|+|+.+.. +.+++|..||+|.+| |++..+.+ .
T Consensus 36 ~~~lAvg~-D~tV~iWd~~t--g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw--------~~~~~~~~~~ 104 (318)
T 4ggc_A 36 GNVLAVAL-DNSVYLWSASS--GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLW--------DVQQQKRLRN 104 (318)
T ss_dssp TSEEEEEE-TTEEEEEETTT--CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEE--------ETTTTEEEEE
T ss_pred CCEEEEEe-CCEEEEEECCC--CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEe--------ecCCceeEEE
Confidence 45666776 79999999887 4667776653 5899999974 588999999999997 55555443 2
Q ss_pred eCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCC
Q psy16019 79 LGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 79 lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl 112 (121)
+.....++.++...+..+..|+. ..+.+.+..+.
T Consensus 105 ~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 105 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp EECCSSCEEEEEEETTEEEEEETTSEEEEEETTSS
T ss_pred ecCccceEEEeecCCCEEEEEecCCceEeeecCCC
Confidence 22223788888888898888887 46777766654
No 98
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.20 E-value=2.6e-05 Score=67.29 Aligned_cols=103 Identities=13% Similarity=0.161 Sum_probs=78.2
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCE-EEEEecCCcEEEEEcCCCCCCCCCCceEE-Ee
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGR-VVCALADGSVAIFRRGPDGQWDLSKYHTV-TL 79 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~-v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~l 79 (121)
+..+..+-.|+.||.|.||+... .+++..+...++|.++.+..++ ++.+..||+|.+| |++..+.+ .+
T Consensus 26 spdg~~lAsgs~Dg~I~lw~~~~--~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lW--------d~~~~~~~~~~ 95 (902)
T 2oaj_A 26 DFTQNLLAIATVTGEVHIYGQQQ--VEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVL--------SLYSQKVLTTV 95 (902)
T ss_dssp ETTTTEEEEEETTSEEEEECSTT--CEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEE--------ETTTCSEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCC--cEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEE--------ECCCCcEEEEE
Confidence 34567899999999999999765 3444444556899999998765 8888999999997 55444332 33
Q ss_pred CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEE
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVI 115 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~ 115 (121)
.. +.+|+++... ++.|..|+. +.|.+.|.++.+..
T Consensus 96 ~~-~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 96 FV-PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp EC-SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred cC-CCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 22 3689999887 478888888 58999999988763
No 99
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.20 E-value=0.00027 Score=53.07 Aligned_cols=105 Identities=6% Similarity=-0.026 Sum_probs=74.4
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG 80 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg 80 (121)
....+..|+.||.|.+|+..+ .+++.++. ++++|.++.+. +..+++|..||+|.+|+ +.........
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~--~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd--------~~~~~~~~~~ 156 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRT--GTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN--------ILGECKFSSA 156 (343)
T ss_dssp STTEEEEEETTSEEEEEETTS--SCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEE--------SSSCEEEECC
T ss_pred CCCEEEEEcCCCcEEEEECCC--CcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEe--------ccCCceeeee
Confidence 445678899999999999887 46677775 56899999997 45799999999999984 3333333332
Q ss_pred ---CCCCceeEeeeeC------------CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 81 ---LPHHSVRSLAAVY------------NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 81 ---~~~~pV~~m~~v~------------~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
....+|+|+.... ..+..|+. +.|.+.| .+.+....|+
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~ 210 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFK 210 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEE
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEc
Confidence 2246788887663 35666665 6899999 4555555543
No 100
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.19 E-value=0.00011 Score=60.53 Aligned_cols=107 Identities=11% Similarity=0.068 Sum_probs=81.0
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
+....+..|+.||.|.||+..+ .+++.++. +.+.|+++.++. .+++.|..||+|.+| |........+
T Consensus 440 ~~g~~l~sgs~Dg~v~vwd~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw--------d~~~~~~~~~ 509 (694)
T 3dm0_A 440 SDGQFALSGSWDGELRLWDLAA--GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW--------NTLGECKYTI 509 (694)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE--------CTTSCEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCC--CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEE--------ECCCCcceee
Confidence 4556788999999999999887 45666664 568999999874 479999999999998 4444444433
Q ss_pred CC----CCCceeEeeeeC----CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 80 GL----PHHSVRSLAAVY----NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 80 g~----~~~pV~~m~~v~----~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.. ...+|+|+.... ..+..|+. +.|.+.|..+.+..+.+.
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 558 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 558 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 21 246799998874 35676666 689999999998887764
No 101
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.19 E-value=1.9e-05 Score=58.14 Aligned_cols=101 Identities=13% Similarity=0.156 Sum_probs=55.6
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEeC-CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP 82 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~-~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~ 82 (121)
.+.+|+|+ +.|+.|+ .+ .+.+++...+ ..+.++.... +.+|+|..+|.|..|.......| ....+.
T Consensus 187 ~g~l~v~t--~~l~~~d-~~--g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~------~~~~~~- 254 (330)
T 3hxj_A 187 DGTIYFGS--DKVYAIN-PD--GTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKW------RFKTGK- 254 (330)
T ss_dssp TCCEEEES--SSEEEEC-TT--SCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEE------EEECSS-
T ss_pred CCEEEEEe--CEEEEEC-CC--CcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCCCEeE------EeeCCC-
Confidence 45566666 6666666 22 1334444443 3455555543 37777777777777732111112 122222
Q ss_pred CCceeEeeee-CCEEEEEeCC-eEEEEeCCCCcEEEEEE
Q psy16019 83 HHSVRSLAAV-YNKVWCGYKN-KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 83 ~~pV~~m~~v-~~~lw~~~gn-~I~Vi~~~tl~i~~~~~ 119 (121)
..+.++... ++.||+|..+ .++.+|+ +++....+.
T Consensus 255 -~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~ 291 (330)
T 3hxj_A 255 -RIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFE 291 (330)
T ss_dssp -CCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEE
T ss_pred -CccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEE
Confidence 223344444 6889998886 8999986 666665554
No 102
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.19 E-value=9.5e-05 Score=54.49 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=77.1
Q ss_pred CCCCeEEEEec-------CCeEEEEECCcccceeeeeEecCCCEEEEEEeC--CEEEEEec-CCcEEEEEcCCCCCCCCC
Q psy16019 3 SVLPTMWLGSQ-------NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLS 72 (121)
Q Consensus 3 ~~~~tvwiGt~-------~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~--~~v~v~La-nG~l~Vy~r~~~g~wd~~ 72 (121)
...+.+|+++. ++.|++|+..+ .+.++.+..+..+..+.... +++|++.. +|.|.+|+.....
T Consensus 50 ~dg~~l~~~~~~~~~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----- 122 (353)
T 3vgz_A 50 QQENALWLATSQSRKLDKGGVVYRLDPVT--LEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE----- 122 (353)
T ss_dssp TTTTEEEEEECCCTTTEESEEEEEECTTT--CCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC-----
T ss_pred CCCCEEEEEcCCCcCCCCCccEEEEcCCC--CeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe-----
Confidence 44568888884 57899999887 46677777777677777764 46888766 5889998443211
Q ss_pred CceEEEeCCCCC-------ceeEeeee--CCEEEEEe---CCeEEEEeCCCCcEEEEEE
Q psy16019 73 KYHTVTLGLPHH-------SVRSLAAV--YNKVWCGY---KNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 73 ~~~~i~lg~~~~-------pV~~m~~v--~~~lw~~~---gn~I~Vi~~~tl~i~~~~~ 119 (121)
....+.++.... .++++... ++.+|++. .+.|+++|++++++.+.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 123 VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 113355544222 25777776 57899987 3679999999999988875
No 103
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.19 E-value=8.2e-05 Score=60.71 Aligned_cols=102 Identities=12% Similarity=0.107 Sum_probs=76.9
Q ss_pred EEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCc---eEEEeCCC
Q psy16019 8 MWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKY---HTVTLGLP 82 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~---~~i~lg~~ 82 (121)
+-.+..+|.|.+|+... .+++++++....+.++.+. ..++|++..||+|.+|+... ... ..+..|.
T Consensus 152 ~vs~~~d~~V~v~D~~t--~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~------~t~~~~~~i~~g~- 222 (543)
T 1nir_A 152 SVTLRDAGQIALVDGDS--KKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWA------KEPTKVAEIKIGI- 222 (543)
T ss_dssp EEEEGGGTEEEEEETTT--CCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTS------SSCEEEEEEECCS-
T ss_pred EEEEcCCCeEEEEECCC--ceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcC------CCCcEEEEEecCC-
Confidence 33455789999999877 5778888877668888776 45899999999999994410 233 3355555
Q ss_pred CCceeEeeee------CCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 83 HHSVRSLAAV------YNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 83 ~~pV~~m~~v------~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
..+.+++. ++.||+++. +.|.|+|..|+++.+.+++
T Consensus 223 --~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 223 --EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp --EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred --CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc
Confidence 34777765 478999883 8999999999999988764
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.18 E-value=6.4e-05 Score=57.31 Aligned_cols=111 Identities=9% Similarity=0.057 Sum_probs=74.7
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeE--------ecCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSI--------QLKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLS 72 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~--------~l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~ 72 (121)
....+..| .||.|.+|+.... .+++..+ .+.+.|.++.++. +.+++|..||+|.+|+........ .
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~ 264 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEIT-DRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD-R 264 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEE-EEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC-T
T ss_pred CCCEEEEe-CCCeEEEEECCCC-CceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc-c
Confidence 44567777 8999999998842 2333322 3447899999985 579999999999999654322100 1
Q ss_pred CceEEEeCCCCC------------ceeEeeee--CCEEEEEeCCeEEEEeCCC-CcEEEEEE
Q psy16019 73 KYHTVTLGLPHH------------SVRSLAAV--YNKVWCGYKNKIHVVDPKS-LDVIRPVT 119 (121)
Q Consensus 73 ~~~~i~lg~~~~------------pV~~m~~v--~~~lw~~~gn~I~Vi~~~t-l~i~~~~~ 119 (121)
..+. +..+.. +|+++... +..|.+|+.+.|.+.|..+ .+..+.++
T Consensus 265 ~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 265 HSKL--FEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp TCEE--ECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEE
T ss_pred eeeE--eccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceee
Confidence 1122 333223 89999988 4567777778999999987 66665554
No 105
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.18 E-value=0.00015 Score=57.34 Aligned_cols=100 Identities=15% Similarity=0.117 Sum_probs=73.9
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
++....+-.|++||.|.||+... +++++++ +.++|+++.+.. .++..|..||+|.||+ .+...+..
T Consensus 25 spdg~~las~~~d~~v~iWd~~~---~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd--------~~~~~~~~ 93 (577)
T 2ymu_A 25 SPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN--------RNGQLLQT 93 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECTTS---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE--------TTSCEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCC---CEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE--------CCCCEEEE
Confidence 45567888999999999999644 6677776 458999999974 4788888999999984 33344445
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCC
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl 112 (121)
+.....+|+++... ++.|..++. ..+.+.+....
T Consensus 94 ~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~ 130 (577)
T 2ymu_A 94 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ 130 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCC
T ss_pred EECCCCCEEEEEECCCCCEEEEEcCCCceeecccccc
Confidence 54445899999987 467777777 46777765543
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.17 E-value=0.00017 Score=54.88 Aligned_cols=102 Identities=10% Similarity=0.054 Sum_probs=73.7
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEeC--CEEEEEe-cCCcEEEEEcCCCCCCCCCCceEEEeCCC
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLP 82 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~--~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~i~lg~~ 82 (121)
.+..|+.+|.|.+|+... .+.+.++..+ ..+.++.+.. +.+|++. .||.|.+| |+...+.+..-..
T Consensus 183 ~~~s~~~d~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~--------d~~~~~~~~~~~~ 252 (433)
T 3bws_A 183 LWVSQMQANAVHVFDLKT--LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVI--------DRKTKLEIRKTDK 252 (433)
T ss_dssp EEEEEGGGTEEEEEETTT--CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEE--------ETTTTEEEEECCC
T ss_pred EEEEECCCCEEEEEECCC--ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEE--------ECCCCcEEEEecC
Confidence 445666889999999876 4566777644 6899999874 4687766 68999998 5555444432222
Q ss_pred CCceeEeeee--CCEEEEEe---------CCeEEEEeCCCCcEEEEE
Q psy16019 83 HHSVRSLAAV--YNKVWCGY---------KNKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 83 ~~pV~~m~~v--~~~lw~~~---------gn~I~Vi~~~tl~i~~~~ 118 (121)
...+.++... ++.||+++ .+.|+++|..+.++.+.+
T Consensus 253 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~ 299 (433)
T 3bws_A 253 IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI 299 (433)
T ss_dssp CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec
Confidence 3567888876 46888887 258999999999887665
No 107
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=4.2e-05 Score=64.18 Aligned_cols=104 Identities=19% Similarity=0.273 Sum_probs=73.0
Q ss_pred CCeEEEEecCCeEEEEECCcccceeee-eEecC-CCEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe--
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLH-SIQLK-DSVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-- 79 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~-~~~l~-~~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l-- 79 (121)
.+.+|+||+++.|+.|+......+... .-.++ ..|.+|... ++.+++|..+|-|..|+... -+...+
T Consensus 373 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~--------~~~~~~~~ 444 (781)
T 3v9f_A 373 QGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRL--------KKFQIIEL 444 (781)
T ss_dssp TSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSS--------CEEEECCS
T ss_pred CCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCC--------CcEEEecc
Confidence 478999999999999997652111111 01344 589999876 78999999877788884332 222222
Q ss_pred -CCCCCceeEeeee-CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16019 80 -GLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLDVIR 116 (121)
Q Consensus 80 -g~~~~pV~~m~~v-~~~lw~~~gn~I~Vi~~~tl~i~~ 116 (121)
+.+...|++|... ++.||+|..+.++.+|+.+.+.++
T Consensus 445 ~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 445 EKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIH 483 (781)
T ss_dssp TTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCE
T ss_pred CCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEe
Confidence 2234789998877 589999999999999998876654
No 108
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.17 E-value=4.9e-05 Score=56.75 Aligned_cols=105 Identities=15% Similarity=0.133 Sum_probs=73.9
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe----CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~----~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.....+..|+.||.|.||+......+.+..++ ++++|.++.+. .+.++.|..||+|.+|+... +.| ....
T Consensus 23 ~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~-~~~----~~~~ 97 (316)
T 3bg1_A 23 YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN-GTW----EKSH 97 (316)
T ss_dssp GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS-SCC----CEEE
T ss_pred CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC-Ccc----eEEE
Confidence 34567889999999999998763233556665 56899999985 46788999999999984321 111 1334
Q ss_pred EeCCCCCceeEeeeeC----CEEEEEeC-CeEEEEeCCCC
Q psy16019 78 TLGLPHHSVRSLAAVY----NKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~----~~lw~~~g-n~I~Vi~~~tl 112 (121)
.+.....+|+++.... ..|.+|+. +.|.+.|..+.
T Consensus 98 ~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 98 EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 4543347999999874 35666666 57999887764
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.17 E-value=8.7e-05 Score=58.62 Aligned_cols=83 Identities=17% Similarity=0.148 Sum_probs=64.8
Q ss_pred eeeeeEecCCCEEEEEEeCCEEEEEec-CCcEEEEEcCCCCCCCCCCceE--EEeCCCCCceeEeeee--CCEEEEEeC-
Q psy16019 28 RCLHSIQLKDSVLNIVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT--VTLGLPHHSVRSLAAV--YNKVWCGYK- 101 (121)
Q Consensus 28 ~~l~~~~l~~~V~~i~~~~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~--i~lg~~~~pV~~m~~v--~~~lw~~~g- 101 (121)
+.+..++++.++.++.+.++.+++|.. ||.|.+| |+..... ..+.....+|++|... ++.|..|+.
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~--------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 509 (615)
T 1pgu_A 438 DIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVF--------KLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVM 509 (615)
T ss_dssp CEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEE--------ETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ceeeecccCCCceEEEEcCCEEEEeecCCCeEEEE--------ECCCccccccccCCccCceEEEEECCCCCEEEEcCCC
Confidence 456677778899999999889999999 9999998 4444444 3333345899999986 477888877
Q ss_pred CeEEEEeCCCCcEEEEE
Q psy16019 102 NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 102 n~I~Vi~~~tl~i~~~~ 118 (121)
+.|++.|..+.+..+.+
T Consensus 510 g~i~iw~~~~~~~~~~~ 526 (615)
T 1pgu_A 510 GKILLYDLQSREVKTSR 526 (615)
T ss_dssp SCEEEEETTTTEEEECC
T ss_pred CeEEEeeCCCCcceeEe
Confidence 68999999999887765
No 110
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.16 E-value=0.00018 Score=53.01 Aligned_cols=104 Identities=15% Similarity=0.059 Sum_probs=72.8
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC----CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~----~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
...+..|+.||.|.+|+......+++..+. .+++|.++.+.. ..+.+|..||+|.+|+....+.+ ....+.-
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~---~~~~~~~ 143 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT---SPIIIDA 143 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB---CCEEEEC
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce---eeeeeec
Confidence 457888999999999998763223444554 457999999974 47899999999999976543221 1222322
Q ss_pred CCCCCceeEeeeeC---------------CEEEEEeC-CeEEEEeCCCCc
Q psy16019 80 GLPHHSVRSLAAVY---------------NKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 80 g~~~~pV~~m~~v~---------------~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
. ..+|+++.... +.|..|+. +.|++.|..+.+
T Consensus 144 h--~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 144 H--AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp C--SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTT
T ss_pred c--cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 2 37888887764 36777776 589999987755
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.14 E-value=0.00014 Score=62.94 Aligned_cols=108 Identities=12% Similarity=0.033 Sum_probs=82.9
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEeC----CEEEEEecCCcEEEEEcCCCCCCCCCCceE
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~----~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
+.....+..|+.||.|.||+..+ .+++.++.- ..+|.++.+.. ..++.|..||.|.+| |+.+.+.
T Consensus 666 s~~~~~l~s~~~d~~v~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw--------d~~~~~~ 735 (1249)
T 3sfz_A 666 SSDDSYIATCSADKKVKIWDSAT--GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW--------DLNQKEC 735 (1249)
T ss_dssp CTTSSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE--------ETTSSSE
T ss_pred ecCCCEEEEEeCCCeEEEEECCC--CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE--------ECCCcch
Confidence 34566889999999999999987 467777754 47999999964 367788999999998 4444433
Q ss_pred -EEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 77 -VTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 77 -i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
-.+.....+|+++... ++.|..|+. +.|.+.|..+.+..+.+.
T Consensus 736 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 736 RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceec
Confidence 2443345899999887 467777777 689999999988777765
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.14 E-value=0.00011 Score=63.55 Aligned_cols=108 Identities=17% Similarity=0.086 Sum_probs=81.1
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV- 77 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i- 77 (121)
+.....+..|+.||.|.||+..+ .+++.+++ +.++|+++.+.. ..+.+|..||+|.|| |+.+.+.+
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw--------d~~~~~~~~ 693 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAET--GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW--------DSATGKLVH 693 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE--------ETTTCCEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCC--CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEE--------ECCCCceEE
Confidence 34567888999999999999887 46677775 458999999974 478899999999998 44444332
Q ss_pred EeCCCCCceeEeeeeC--C--EEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 78 TLGLPHHSVRSLAAVY--N--KVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~--~--~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.+.....+|.|+.... + .+..|+. +.|.+.|..+.+....+.
T Consensus 694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~ 740 (1249)
T 3sfz_A 694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF 740 (1249)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence 3333348999999874 3 3555555 589999999998877653
No 113
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.13 E-value=0.00012 Score=52.77 Aligned_cols=115 Identities=8% Similarity=0.013 Sum_probs=78.7
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCC------EEEEEecCCcEEEEEcCCCC----------
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQG------RVVCALADGSVAIFRRGPDG---------- 67 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~------~v~v~LanG~l~Vy~r~~~g---------- 67 (121)
...+..|+.+|.+.++.......+.+..+. ++++|.++.+..+ .+++|..||.|.+|+.....
T Consensus 182 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 261 (351)
T 3f3f_A 182 PEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLT 261 (351)
T ss_dssp CCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------
T ss_pred CcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccc
Confidence 568899999999977776663223455554 4579999999866 58888999999999765321
Q ss_pred ----------------------------CCCCCCceEE-EeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEE
Q psy16019 68 ----------------------------QWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVI 115 (121)
Q Consensus 68 ----------------------------~wd~~~~~~i-~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~ 115 (121)
.|+......+ .+.....+|+++... ++.|..|+. +.|.+.|..+.+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 262 NSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp -----------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred ceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 1121122222 333335799999987 355777776 57999999987666
Q ss_pred EEEE
Q psy16019 116 RPVT 119 (121)
Q Consensus 116 ~~~~ 119 (121)
+.+.
T Consensus 342 ~~~~ 345 (351)
T 3f3f_A 342 KCMS 345 (351)
T ss_dssp EEEE
T ss_pred hhee
Confidence 5553
No 114
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.13 E-value=5.9e-05 Score=63.39 Aligned_cols=106 Identities=12% Similarity=0.276 Sum_probs=73.2
Q ss_pred CCeEEEEecCCeEEEEECCcc-cceeeeeE-----ecC-CCEEEEEEe-CCE-EEEEecCCcEEEEEcCCCCCCCCCCce
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQ-WRRCLHSI-----QLK-DSVLNIVHV-QGR-VVCALADGSVAIFRRGPDGQWDLSKYH 75 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~-~~~~l~~~-----~l~-~~V~~i~~~-~~~-v~v~LanG~l~Vy~r~~~g~wd~~~~~ 75 (121)
++.+|+||++|.|+.|+.... .+.-...- .++ ..|.+|... ++. +++|..+|-|..|+...+.. .
T Consensus 367 ~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~------~ 440 (795)
T 4a2l_A 367 DKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV------E 440 (795)
T ss_dssp TSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE------E
T ss_pred CCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE------E
Confidence 568999999999999997652 11111110 233 579999875 567 99999988899996543221 1
Q ss_pred EEEeC---CCCCceeEeeee-CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16019 76 TVTLG---LPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLDVIR 116 (121)
Q Consensus 76 ~i~lg---~~~~pV~~m~~v-~~~lw~~~gn~I~Vi~~~tl~i~~ 116 (121)
.+... -+...|++|... ++.||+|..+.++.+|+.+.+.++
T Consensus 441 ~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 441 NFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTT 485 (795)
T ss_dssp EECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEE
T ss_pred EeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEE
Confidence 11111 123678998876 589999999999999999876653
No 115
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.00031 Score=52.65 Aligned_cols=103 Identities=9% Similarity=0.070 Sum_probs=67.2
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEe---cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceE-EEeC
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQ---LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHT-VTLG 80 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~---l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~-i~lg 80 (121)
.+..|+.||.|.+|+......+....+. +.++|.++.++. +.+.+|..||+|.+|+...... +...... ..+.
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~-~~~~~~~~~~~~ 104 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESAD-RTFEMDLLAIIE 104 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--------CCCEEEEEEC
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcC-ccccceeEEEEc
Confidence 6788999999999998763223444442 457999999874 5788899999999996542211 0011222 2343
Q ss_pred CCCCceeEeeee--CCEEEEEeC-CeEEEEeCC
Q psy16019 81 LPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPK 110 (121)
Q Consensus 81 ~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~ 110 (121)
....+|+++... ++.|..|+. +.|++.|..
T Consensus 105 ~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp ----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 334799999987 356776666 589999984
No 116
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.11 E-value=0.00011 Score=60.39 Aligned_cols=110 Identities=13% Similarity=0.131 Sum_probs=79.6
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
...+.+..|++||.|.+|+.... ++....+. .+.+|.++.++. +.+++|..||+|.+|+.... .....+.
T Consensus 107 ~~~~~l~~~~~dg~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~-----~~~~~~~ 180 (814)
T 3mkq_A 107 PTKPYVLSGSDDLTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-----TPNFTLT 180 (814)
T ss_dssp SSSSEEEEEETTSEEEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS-----SCSEEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----cceeEEe
Confidence 45668999999999999998763 23445554 558999999975 47888999999999954321 1122233
Q ss_pred eCCCCCceeEeeee----CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAV----YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v----~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.+. ..+++++... +..|..|+. +.|.+.|..+.+..+.+.
T Consensus 181 ~~~-~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 181 TGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (814)
T ss_dssp CCC-TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred cCC-CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc
Confidence 322 3788888875 456777776 589999999998877765
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00012 Score=54.87 Aligned_cols=104 Identities=9% Similarity=0.012 Sum_probs=72.5
Q ss_pred EEEEecCCeEEEEECCccc-------ceeeeeEecC--CCEEEEEEeC----CEEEEEecCCcEEEEEcCCCCCCCCCCc
Q psy16019 8 MWLGSQNGSVFVHSAVSQW-------RRCLHSIQLK--DSVLNIVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~-------~~~l~~~~l~--~~V~~i~~~~----~~v~v~LanG~l~Vy~r~~~g~wd~~~~ 74 (121)
+..|+.||.|.+|+..... .+.++.+.++ ++|.++.++. +.+..|..||+|.+| |+...
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~w--------d~~~~ 159 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQ--------SYEDD 159 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEE--------ESSSS
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEE--------ECCCC
Confidence 7778889999888766421 2335555544 7899999865 467779999999998 55544
Q ss_pred eEEEe--CCCCCceeEeeeeC--CEEEEEeC-CeEEEEeCCCCcEE-EEEE
Q psy16019 75 HTVTL--GLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLDVI-RPVT 119 (121)
Q Consensus 75 ~~i~l--g~~~~pV~~m~~v~--~~lw~~~g-n~I~Vi~~~tl~i~-~~~~ 119 (121)
+.+.+ +....+|+|+.... ..|..|+. +.|.+.|..+.+.. ..|+
T Consensus 160 ~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 210 (343)
T 3lrv_A 160 SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP 210 (343)
T ss_dssp CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC
T ss_pred cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe
Confidence 44432 22245899999884 45665555 68999999998876 5554
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.09 E-value=6e-05 Score=65.01 Aligned_cols=102 Identities=13% Similarity=0.187 Sum_probs=79.9
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE--Ee---
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV--TL--- 79 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i--~l--- 79 (121)
.+..|+.||.|.+|+... .+++.++..++.|+++.+. .+.+++|..||+|.+|+ ++..+.. .+
T Consensus 71 ~L~S~s~D~~v~lWd~~~--~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd--------~~~~~~~~~~i~~~ 140 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYS--QKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYD--------IDRDQLSSFKLDNL 140 (902)
T ss_dssp EEEEEETTCEEEEEETTT--CSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEE--------TTTTEEEEEEECCH
T ss_pred EEEEEECcCeEEEEECCC--CcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEE--------CCCCccccceeccc
Confidence 588899999999999987 5778888888999999987 45899999999999984 4443332 11
Q ss_pred -------CCCCCceeEeeeeC---CEEEEEeCC-eEEEEeCCCCcEEEEEE
Q psy16019 80 -------GLPHHSVRSLAAVY---NKVWCGYKN-KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 80 -------g~~~~pV~~m~~v~---~~lw~~~gn-~I~Vi~~~tl~i~~~~~ 119 (121)
.....||+++.... +.+.+|+.+ .| +.|.++.+..+.|+
T Consensus 141 ~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~ 190 (902)
T 2oaj_A 141 QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFI 190 (902)
T ss_dssp HHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEEC
T ss_pred cccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEe
Confidence 11247999999985 467888875 56 99999998887764
No 119
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.09 E-value=0.00031 Score=53.86 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=73.4
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.....+..|+.||.|.+|+..+ .++...+..++.|.++.... ..+++|..||+|.+|+ +.....+ .
T Consensus 175 p~~~~l~s~s~d~~v~iwd~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd--------~~~~~~~~~ 244 (393)
T 1erj_A 175 PSGDKLVSGSGDRTVRIWDLRT--GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWD--------SETGFLVER 244 (393)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--TEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEE--------TTTCCEEEE
T ss_pred CCCCEEEEecCCCcEEEEECCC--CeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEE--------CCCCcEEEe
Confidence 3456889999999999999887 56777788888999999864 5788899999999984 3333222 2
Q ss_pred e-------CCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCC
Q psy16019 79 L-------GLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 79 l-------g~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl 112 (121)
+ .....+|.++... ++.|..|+. +.|.+.|..+.
T Consensus 245 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 245 LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp EC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred ecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 2 1124789999887 466777776 58999998764
No 120
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.09 E-value=9.2e-05 Score=53.94 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=72.2
Q ss_pred CCCCeEEEEe-cCCeEEEEECCcccceeeeeEecCC------CEEEEEEe--CCEEEEEe------------cCCcEEEE
Q psy16019 3 SVLPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKD------SVLNIVHV--QGRVVCAL------------ADGSVAIF 61 (121)
Q Consensus 3 ~~~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~------~V~~i~~~--~~~v~v~L------------anG~l~Vy 61 (121)
.....+++.. .++.|++|+..+ .+.++.+.++. .+.++.+. ++++|++. .++.|.+|
T Consensus 43 ~dg~~l~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~ 120 (337)
T 1pby_B 43 PGGRIAYATVNKSESLVKIDLVT--GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120 (337)
T ss_dssp TTSSEEEEEETTTTEEEEEETTT--CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEECCC--CCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEE
Confidence 3445677665 578999999877 45666676654 66677776 34788886 57999998
Q ss_pred EcCCCCCCCCCCceE---EEeCCCCCceeEeeee--CCEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16019 62 RRGPDGQWDLSKYHT---VTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 62 ~r~~~g~wd~~~~~~---i~lg~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~tl~i~~~~~ 119 (121)
+ ++..+. +..+. .+.++... ++.|+++ .+.|+++|..++++.+.++
T Consensus 121 d--------~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~~~~~~~~ 171 (337)
T 1pby_B 121 D--------AETLSRRKAFEAPR---QITMLAWARDGSKLYGL-GRDLHVMDPEAGTLVEDKP 171 (337)
T ss_dssp E--------TTTTEEEEEEECCS---SCCCEEECTTSSCEEEE-SSSEEEEETTTTEEEEEEC
T ss_pred E--------CCCCcEEEEEeCCC---CcceeEECCCCCEEEEe-CCeEEEEECCCCcEeeeee
Confidence 4 444333 34433 45566655 4668888 6889999999999887765
No 121
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.08 E-value=0.00018 Score=55.01 Aligned_cols=106 Identities=17% Similarity=0.213 Sum_probs=77.3
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEE-e
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-L 79 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~-l 79 (121)
..+.+..|+.||.|.+|+.... .+++..+. +.++|.++.+.. ..+..|..||+|.+| |+...+.+. +
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lw--------d~~~~~~~~~~ 287 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRIT-SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLF--------DMRTGHQLQVY 287 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTT-CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEE--------ETTTTEEEEEE
T ss_pred CCCEEEEEECCCeEEEEECCCC-CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEE--------ECCCCcEEEEe
Confidence 3457888999999999998742 34556664 558999999974 478889999999998 555544432 2
Q ss_pred CC-C------CCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 80 GL-P------HHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 80 g~-~------~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
.. + ...|+++... ++.|.+|+. +.|++.|..+.+....+
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 11 1 1247787766 577888887 58999999988877665
No 122
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.08 E-value=0.00015 Score=59.98 Aligned_cols=106 Identities=10% Similarity=0.070 Sum_probs=78.7
Q ss_pred eEEEEe-cCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCCC
Q psy16019 7 TMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH 83 (121)
Q Consensus 7 tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~~ 83 (121)
.+++.. +++.|.+++... .+.+.++.....+..+... +.++||+..||.|.+|+.... .......+..|.
T Consensus 168 ~~~V~~~~~~~V~viD~~t--~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~---t~~~v~~i~~G~-- 240 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGST--YEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK---EPTTVAEIKIGS-- 240 (567)
T ss_dssp EEEEEETTTTEEEEEETTT--CCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSS---SCCEEEEEECCS--
T ss_pred eEEEEeCCCCeEEEEECCC--CeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCC---CCcEeEEEecCC--
Confidence 455444 589999999887 5778888888788888886 458999999999999943200 011123466666
Q ss_pred CceeEeeee------CCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 84 HSVRSLAAV------YNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 84 ~pV~~m~~v------~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
.| +.|.+. ++.+|+++. ++|.|||+.|+++.+.+.+
T Consensus 241 ~P-~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 241 EA-RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp EE-EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred CC-ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 55 566665 578999876 8999999999999998764
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.00014 Score=61.03 Aligned_cols=111 Identities=20% Similarity=0.240 Sum_probs=80.7
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccc---e--eeeeEecC-----CCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCC
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWR---R--CLHSIQLK-----DSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDL 71 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~---~--~l~~~~l~-----~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~ 71 (121)
++.+..+..|++||.|.||++.+..- + .+++++.. +.|.++.+.++.+.++..|+++-+|+...... .
T Consensus 138 SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~--~ 215 (588)
T 2j04_A 138 NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSH--Q 215 (588)
T ss_dssp CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSS--C
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCcc--c
Confidence 46778999999999999999887310 0 24665432 59999999987788889999999984432210 0
Q ss_pred CCceEEEeCCCCCceeEeeeeCCEEEEEeCCeEEEEeCCCCcEE
Q psy16019 72 SKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLDVI 115 (121)
Q Consensus 72 ~~~~~i~lg~~~~pV~~m~~v~~~lw~~~gn~I~Vi~~~tl~i~ 115 (121)
...+.+. +.....|.+++.+++.|..++.+.|++.|..+.+++
T Consensus 216 ~~~~tL~-~~h~~~V~svaFsg~~LASa~~~tIkLWd~~~~~~~ 258 (588)
T 2j04_A 216 PVSRMIQ-NASRRKITDLKIVDYKVVLTCPGYVHKIDLKNYSIS 258 (588)
T ss_dssp CCEEEEE-CCCSSCCCCEEEETTEEEEECSSEEEEEETTTTEEE
T ss_pred cceeeec-ccccCcEEEEEEECCEEEEEeCCeEEEEECCCCeEE
Confidence 0112332 122378999999888999998899999999998874
No 124
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.07 E-value=2e-05 Score=59.06 Aligned_cols=111 Identities=10% Similarity=0.047 Sum_probs=75.2
Q ss_pred CCCCeEEEEecCCeEEEEECCcccc-eeeeeEe--cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCC--------CCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWR-RCLHSIQ--LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPD--------GQW 69 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~-~~l~~~~--l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~--------g~w 69 (121)
.....+..|++||.|.+|+...... .....+. +.+.|.++.+.. ..+++|..||+|.+|+.... ..|
T Consensus 110 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 189 (377)
T 3dwl_C 110 PNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVW 189 (377)
T ss_dssp TTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSS
T ss_pred CCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcccccc
Confidence 3456889999999999999887321 1356665 568999999975 47889999999999986422 123
Q ss_pred CCCCc--eE-EEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcE
Q psy16019 70 DLSKY--HT-VTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDV 114 (121)
Q Consensus 70 d~~~~--~~-i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i 114 (121)
...-+ +. ..+ ....+|+++... ++.|..|+. +.|.+.|..+.+.
T Consensus 190 ~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 190 GSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred ccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 22211 12 233 335789999987 456777777 5899999988875
No 125
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.07 E-value=0.00025 Score=54.26 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=75.3
Q ss_pred CCCeEEEEe--cCCeEEEEECCcccceeeeeEecCCCEEEEEEeC-CEEEEEecCCcEEEEEcCCCC-------------
Q psy16019 4 VLPTMWLGS--QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ-GRVVCALADGSVAIFRRGPDG------------- 67 (121)
Q Consensus 4 ~~~tvwiGt--~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~-~~v~v~LanG~l~Vy~r~~~g------------- 67 (121)
....+.+|+ +|+.|.||+..+ .+++..++.+..|.++.+.+ ++.++..+++.+.+|....+.
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~--~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSD--LTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTT--TEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEE
T ss_pred CCCEEEEEECCCCCEEEEeECCC--CcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCC
Confidence 344566666 689999999988 56777888888999999874 355555566666666543221
Q ss_pred ---------------------------CCCCCCceE-----EEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCC
Q psy16019 68 ---------------------------QWDLSKYHT-----VTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 68 ---------------------------~wd~~~~~~-----i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl 112 (121)
.||+..... ..+.....+|+||... ++.|..|+. +.|.|.|.+++
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 022111110 1122224689998877 466777777 58999999999
Q ss_pred cEEEEE
Q psy16019 113 DVIRPV 118 (121)
Q Consensus 113 ~i~~~~ 118 (121)
+..+.+
T Consensus 302 ~~~~~~ 307 (365)
T 4h5i_A 302 SMSKIF 307 (365)
T ss_dssp EEEEEE
T ss_pred cEEEEe
Confidence 988775
No 126
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.07 E-value=0.00016 Score=54.47 Aligned_cols=107 Identities=10% Similarity=0.114 Sum_probs=76.7
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.....+..|+.||.+.+|+......+++..++ +.++|.++.+. ++.++.|..||+|.+|+..... ....+ .
T Consensus 71 p~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~~ 145 (345)
T 3fm0_A 71 PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED-----EYECVSV 145 (345)
T ss_dssp TTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS-----CEEEEEE
T ss_pred CCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC-----CeEEEEE
Confidence 45568899999999999997764335566664 45899999997 4578889999999998654321 12222 3
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcE
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDV 114 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i 114 (121)
+.....+|+++... ++.|..|+. +.|.+.|.++.+.
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~ 184 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW 184 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE
Confidence 33335789999877 356777776 5799998877653
No 127
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.05 E-value=0.00061 Score=49.21 Aligned_cols=103 Identities=13% Similarity=0.054 Sum_probs=77.3
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEec-CCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL 81 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~ 81 (121)
.....+..|+.||.|.+|+..+ .++++.++- ...+.++......+..|..+|.+.++..... ......+..
T Consensus 77 ~~~~~l~sgs~Dg~v~iw~~~~--~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~------~~~~~~~~~ 148 (318)
T 4ggc_A 77 KEGNYLAVGTSSAEVQLWDVQQ--QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA------EHHVATLSG 148 (318)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSS------SCEEEEEEC
T ss_pred CCCCEEEEEECCCcEEEeecCC--ceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCC------ceeEEEEcC
Confidence 4567889999999999999988 577777754 4789999999999999999999999854321 122222322
Q ss_pred CCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 82 PHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 82 ~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
...++.++... ++.|..|+. +.|.+.|..+.+
T Consensus 149 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 149 HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred ccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 23778777766 467777777 579999998865
No 128
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.04 E-value=0.00035 Score=52.38 Aligned_cols=101 Identities=11% Similarity=0.021 Sum_probs=69.6
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEeC------------CEEEEEecCCcEEEEEcCCCCCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQ------------GRVVCALADGSVAIFRRGPDGQW 69 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~------------~~v~v~LanG~l~Vy~r~~~g~w 69 (121)
.....+..|+.||.|.+|+............ ...+.|.++.+.. ..+..|..||+|.+|+.
T Consensus 128 p~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~------ 201 (343)
T 2xzm_R 128 PDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT------ 201 (343)
T ss_dssp SSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET------
T ss_pred CCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC------
Confidence 4556789999999999999875211111111 2447899999875 46888999999999852
Q ss_pred CCCCceEEEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCC
Q psy16019 70 DLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKS 111 (121)
Q Consensus 70 d~~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~t 111 (121)
.......+.....+|.++... ++.|..|+. +.|++.|..+
T Consensus 202 --~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 202 --NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp --TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred --CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 222222332234899999887 467777777 5899999843
No 129
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.02 E-value=0.00029 Score=53.80 Aligned_cols=106 Identities=9% Similarity=0.086 Sum_probs=75.2
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEe------cCCCEEEEEEe---CCEEEEEecCCcEEEEEcCCCCCCCCCCceE
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQ------LKDSVLNIVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~------l~~~V~~i~~~---~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
..+..|+.||.|.+|+... .+++..+. +...|.++.+. .+.++.|..||+|.+|..... ....
T Consensus 171 ~~l~s~s~D~~i~~wd~~~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~------~~~~ 242 (380)
T 3iz6_a 171 TRLITGSGDQTCVLWDVTT--GQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT------SRAV 242 (380)
T ss_dssp SCEEEECTTSCEEEECTTT--CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT------CCCC
T ss_pred CEEEEECCCCcEEEEEcCC--CcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC------Ccce
Confidence 3588999999999999887 34444441 33689999884 467888999999999843211 1112
Q ss_pred EEeCCCCCceeEeeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 77 VTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v~--~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
..+.....+|.++.... +.|..|+. +.|.+.|..+.+..+.+.
T Consensus 243 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 243 RTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 23333347999998873 56766666 589999999988776553
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.01 E-value=5.1e-05 Score=61.93 Aligned_cols=110 Identities=20% Similarity=0.223 Sum_probs=80.8
Q ss_pred CeEEEEe--cCCeEEEEECCcc-----cceeeeeEecC-CCEEEEEEeC--CEEEEEe-------cCCcEEEEEcCCCCC
Q psy16019 6 PTMWLGS--QNGSVFVHSAVSQ-----WRRCLHSIQLK-DSVLNIVHVQ--GRVVCAL-------ADGSVAIFRRGPDGQ 68 (121)
Q Consensus 6 ~tvwiGt--~~g~I~v~~~~~~-----~~~~l~~~~l~-~~V~~i~~~~--~~v~v~L-------anG~l~Vy~r~~~g~ 68 (121)
..+|+.. .++.|.||+.... .-+++++++.+ ..++.|+.+. .++||+. .+++|.||+.....
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~- 460 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD- 460 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT-
T ss_pred ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC-
Confidence 5677765 4799999997651 13578888876 5777888774 4899987 36799999665432
Q ss_pred CCCCCceEEEeC------CCCCceeEeeee--CCEEEEEeC------CeEEEEeCCCCcEEEEEE
Q psy16019 69 WDLSKYHTVTLG------LPHHSVRSLAAV--YNKVWCGYK------NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 69 wd~~~~~~i~lg------~~~~pV~~m~~v--~~~lw~~~g------n~I~Vi~~~tl~i~~~~~ 119 (121)
..++.+.++ .....+..+.+. +++||+++. +.|.|+|.+|++++++++
T Consensus 461 ---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 461 ---AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp ---SCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred ---CCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 123566553 334677788777 699999853 789999999999999876
No 131
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.00011 Score=61.68 Aligned_cols=103 Identities=16% Similarity=0.092 Sum_probs=74.8
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC----CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~----~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
...+..|+.||.|.+|+......+....+. +.++|.++.+.. +.+++|..||+|.+|+..... ......+
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~-----~~~~~~~ 141 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-----TTSPIII 141 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS-----CCCCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC-----CcceeEe
Confidence 568999999999999998774223555554 458999999984 589999999999999654332 1122233
Q ss_pred CCCCCceeEeeeeC---------------CEEEEEeC-CeEEEEeCCCC
Q psy16019 80 GLPHHSVRSLAAVY---------------NKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 80 g~~~~pV~~m~~v~---------------~~lw~~~g-n~I~Vi~~~tl 112 (121)
.....+|+++.... +.+..|+. +.|.+.|..+.
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETT
T ss_pred ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCC
Confidence 33347899998764 45777776 67999998776
No 132
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.00 E-value=8.3e-05 Score=57.76 Aligned_cols=106 Identities=8% Similarity=-0.000 Sum_probs=73.0
Q ss_pred CCeEEEEecCCeEEEEECCcc--------cceeeeeEe-cCCCEEEEEEeCC---EEEEEecCCcEEEEEcCCCCC--CC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQ--------WRRCLHSIQ-LKDSVLNIVHVQG---RVVCALADGSVAIFRRGPDGQ--WD 70 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~--------~~~~l~~~~-l~~~V~~i~~~~~---~v~v~LanG~l~Vy~r~~~g~--wd 70 (121)
...+..|+++|.|+||+.... ..+.+.++. +.+.|+++.+..+ .+++|..||+|.+|+....+. +.
T Consensus 141 ~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 141 ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 347889999999999998752 123455554 4478999998753 788999999999997654321 11
Q ss_pred CCCceEEEeCCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCC
Q psy16019 71 LSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSL 112 (121)
Q Consensus 71 ~~~~~~i~lg~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl 112 (121)
+..... +.....+|.++.... ..+..++. +.|+++|..+.
T Consensus 221 ~~~~~~--~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 221 IDAKNI--FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp EECSEE--ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred ecccee--ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 111222 222247899999873 45556655 68999999987
No 133
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.00 E-value=0.00045 Score=52.04 Aligned_cols=105 Identities=13% Similarity=0.136 Sum_probs=73.4
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeE--ecCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCce-EE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSI--QLKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYH-TV 77 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~--~l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~-~i 77 (121)
.....+-.|+.||.|.||+.......+...+ .+.++|.++.+.. ++++.|..||++.+|....+ ... ..
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~------~~~~~~ 99 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD------DFECVT 99 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-------EEEEE
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC------CeEEEE
Confidence 4456788899999999999876321222222 2457999999974 57899999999999854321 112 23
Q ss_pred EeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 78 TLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
.+.....+|+++... ++.|..|+. +.|++.|..+.+
T Consensus 100 ~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS
T ss_pred EccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC
Confidence 444445899999987 466777776 589999987653
No 134
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.00 E-value=0.00062 Score=55.42 Aligned_cols=103 Identities=13% Similarity=0.126 Sum_probs=77.2
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-EeC--
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLG-- 80 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~lg-- 80 (121)
.+..|++|+.|.+|+... .+++.++. +.+.|.++.+.. ..+..|..||+|.+|+. .+.+.+ .+.
T Consensus 162 ~l~s~s~D~~v~lwd~~~--~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~--------~~g~~~~~~~~~ 231 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPP--FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG--------VDGTKTGVFEDD 231 (611)
T ss_dssp EEEEEETTSCEEEEETTT--BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET--------TTCCEEEECBCT
T ss_pred EEEEEeCCCeEEEEECCC--CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC--------CCCcEeeeeccc
Confidence 588899999999999766 46667774 558999999974 46788999999999853 332222 231
Q ss_pred -----CCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 81 -----LPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 81 -----~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
....+|.++... ++.|..|+. +.|.+.|..+++..+.++
T Consensus 232 ~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 232 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 124789999987 356776666 589999999999888765
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.99 E-value=5.5e-05 Score=59.90 Aligned_cols=105 Identities=17% Similarity=0.146 Sum_probs=72.5
Q ss_pred CCCeEE----EEecCCeEEEEECCccc------ceeeeeEe----cCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCC
Q psy16019 4 VLPTMW----LGSQNGSVFVHSAVSQW------RRCLHSIQ----LKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPD 66 (121)
Q Consensus 4 ~~~tvw----iGt~~g~I~v~~~~~~~------~~~l~~~~----l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~ 66 (121)
....+. .|+.||.|.||+..+.. ++.+..++ +.++|.++.++. +.+.+|..||+|.+|
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw----- 177 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL----- 177 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE-----
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE-----
Confidence 344566 47789999999976531 12333333 357999999974 357779999999998
Q ss_pred CCCCCCCceEE--EeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 67 GQWDLSKYHTV--TLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 67 g~wd~~~~~~i--~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
|+.....+ ..+ ...+|+|+... ++.|+.|+. +.|.++|.+ ++..+.+
T Consensus 178 ---D~~~~~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 178 ---QVTETVKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp ---EESSSEEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred ---EcCCCcceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 55444332 223 23689999887 578998888 589999998 5555544
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.98 E-value=0.00026 Score=51.46 Aligned_cols=104 Identities=11% Similarity=0.058 Sum_probs=74.4
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEecCC---CEEEEEEeC--CEEEEEec-CCcEEEEEcCCCCCCCCCCceE---E
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQLKD---SVLNIVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYHT---V 77 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~---~V~~i~~~~--~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~---i 77 (121)
.+..++.++.|++|+..+ .+.++++.++. .+.++.+.. +++|++.. +|.|.+|+. ...+. +
T Consensus 3 ~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~--------~~~~~~~~~ 72 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEK--MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL--------VTGETLGRI 72 (337)
T ss_dssp EEEEEETTTEEEEEETTT--TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEET--------TTCCEEEEE
T ss_pred EEEEcCCCCeEEEEECCC--CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEEC--------CCCCeEeeE
Confidence 567888999999999887 46778888886 688888864 36777665 678999843 33323 4
Q ss_pred EeCCCC---CceeEeeee--CCEEEEEe-------------CCeEEEEeCCCCcEEEEEEe
Q psy16019 78 TLGLPH---HSVRSLAAV--YNKVWCGY-------------KNKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 78 ~lg~~~---~pV~~m~~v--~~~lw~~~-------------gn~I~Vi~~~tl~i~~~~~~ 120 (121)
.++.+. ..+.++... ++.||++. .+.|+++|..+++..+.++.
T Consensus 73 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 133 (337)
T 1pby_B 73 DLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA 133 (337)
T ss_dssp ECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC
T ss_pred EcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC
Confidence 443310 144566665 56899985 48999999999998887753
No 137
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.98 E-value=0.00021 Score=54.38 Aligned_cols=110 Identities=9% Similarity=0.145 Sum_probs=71.6
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccc---------eeeeeEe-cC------------CCEEEEEEeCC----EEEEEecC
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWR---------RCLHSIQ-LK------------DSVLNIVHVQG----RVVCALAD 55 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~---------~~l~~~~-l~------------~~V~~i~~~~~----~v~v~Lan 55 (121)
+.....+..|+.||.|.||+..+..+ +....++ +. ++|.++.+..+ .+++|..|
T Consensus 37 s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d 116 (447)
T 3dw8_B 37 NHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND 116 (447)
T ss_dssp CSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred CCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence 34567889999999999999876321 1344443 23 77999999854 69999999
Q ss_pred CcEEEEEcCCCCC----CCC----------------CCce------------EEE-eCCCCCceeEeeee--CCEEEEEe
Q psy16019 56 GSVAIFRRGPDGQ----WDL----------------SKYH------------TVT-LGLPHHSVRSLAAV--YNKVWCGY 100 (121)
Q Consensus 56 G~l~Vy~r~~~g~----wd~----------------~~~~------------~i~-lg~~~~pV~~m~~v--~~~lw~~~ 100 (121)
|+|.+|+...... +.+ .-|. ... ......+|+++... ++.|..|.
T Consensus 117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 196 (447)
T 3dw8_B 117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSAD 196 (447)
T ss_dssp SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEEC
T ss_pred CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEeC
Confidence 9999997542110 000 0000 001 12224799999887 46677774
Q ss_pred CCeEEEEeCCC
Q psy16019 101 KNKIHVVDPKS 111 (121)
Q Consensus 101 gn~I~Vi~~~t 111 (121)
.+.|.+.|..+
T Consensus 197 d~~i~iwd~~~ 207 (447)
T 3dw8_B 197 DLRINLWHLEI 207 (447)
T ss_dssp SSEEEEEETTE
T ss_pred CCeEEEEECCC
Confidence 47899999984
No 138
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.97 E-value=0.00069 Score=52.15 Aligned_cols=103 Identities=13% Similarity=0.059 Sum_probs=77.3
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL 81 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~ 81 (121)
.....+..|+.||.|.||+..+ .+++..++ +...|.++.+....+..|..||.+.+|.... ....+..+..
T Consensus 157 pdg~~lasgs~Dg~v~iWd~~~--~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~------~~~~~~~~~~ 228 (420)
T 4gga_A 157 KEGNYLAVGTSSAEVQLWDVQQ--QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRV------AEHHVATLSG 228 (420)
T ss_dssp TTSSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTS------SSCEEEEEEC
T ss_pred CCCCEEEEEECCCeEEEEEcCC--CcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecc------cceeeEEecc
Confidence 4567899999999999999987 56777775 4589999999999999999999999985332 1222333333
Q ss_pred CCCceeEeeee--CCEEEEEeC-CeEEEEeCCCCc
Q psy16019 82 PHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 82 ~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
...++.++... ++.+..++. +.|.+.+..+.+
T Consensus 229 h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 229 HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred cccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 33778777766 466777766 689999988765
No 139
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.96 E-value=0.00088 Score=51.92 Aligned_cols=108 Identities=12% Similarity=0.087 Sum_probs=72.8
Q ss_pred eEEEEecCCeEEEEECCcccc--e---eeeeE-ecCCCEEEEEEeC---CEEEEEecCCcEEEEEcCCCCCCCCCCceEE
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWR--R---CLHSI-QLKDSVLNIVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~--~---~l~~~-~l~~~V~~i~~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.+..|..||.|.+|+.....+ . ....+ .+.+.|.++.+.. +.++++..||.|.+|+...... ......+
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~--~~~~~~~ 273 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT--SKPSHTV 273 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS--SSCSEEE
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC--CcceeEe
Confidence 788999999999999876311 1 13334 3457899999863 4666788999999996553321 1122333
Q ss_pred EeCCCCCceeEeeeeC--C-EEEEEeC-CeEEEEeCCCC-cEEEEE
Q psy16019 78 TLGLPHHSVRSLAAVY--N-KVWCGYK-NKIHVVDPKSL-DVIRPV 118 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~--~-~lw~~~g-n~I~Vi~~~tl-~i~~~~ 118 (121)
.-. ..+|++|.... . -+..|+. +.|.++|..+. +..+.|
T Consensus 274 ~~~--~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 317 (430)
T 2xyi_A 274 DAH--TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317 (430)
T ss_dssp ECC--SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred ecC--CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe
Confidence 333 38999999884 3 3556666 68999999884 444444
No 140
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.95 E-value=0.00049 Score=57.69 Aligned_cols=101 Identities=11% Similarity=0.164 Sum_probs=69.9
Q ss_pred CCe-EEEEecCCeEEEEECCcccceeeeeE--------ecC-CCEEEEEEe---CCEEEEEecCCcEEEEEcCCCCCCCC
Q psy16019 5 LPT-MWLGSQNGSVFVHSAVSQWRRCLHSI--------QLK-DSVLNIVHV---QGRVVCALADGSVAIFRRGPDGQWDL 71 (121)
Q Consensus 5 ~~t-vwiGt~~g~I~v~~~~~~~~~~l~~~--------~l~-~~V~~i~~~---~~~v~v~LanG~l~Vy~r~~~g~wd~ 71 (121)
++. ||+||++|.|+.|+.... ....+ .++ ..|.+|... ++.+++|..++-|..|...
T Consensus 76 ~g~~lWigt~~~Gl~~~d~~~~---~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~------- 145 (781)
T 3v9f_A 76 VQPVIWIATQRAGLNAYNYETQ---SFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIA------- 145 (781)
T ss_dssp SSSEEEEEESSSCEEEEETTTT---EEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETT-------
T ss_pred CCCEEEEEeCCCCcceECCCCC---eEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECC-------
Confidence 456 999999978999997652 12222 123 368888875 4899999966668888543
Q ss_pred CCceEEEeC------CCCCceeEeeee-CCEEEEEeCC-eEEEEeCCCCcEEE
Q psy16019 72 SKYHTVTLG------LPHHSVRSLAAV-YNKVWCGYKN-KIHVVDPKSLDVIR 116 (121)
Q Consensus 72 ~~~~~i~lg------~~~~pV~~m~~v-~~~lw~~~gn-~I~Vi~~~tl~i~~ 116 (121)
..++..+. .+...|++|... ++.||+|..+ .++.+|+.+.++++
T Consensus 146 -~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~ 197 (781)
T 3v9f_A 146 -TGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKH 197 (781)
T ss_dssp -TTEEEEESTTTCTTCSCCCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEE
T ss_pred -CCeEEeeccCcccCCCccceEEEEECCCCCEEEEecCCCeEEEcCCCCceEe
Confidence 22222221 223568898876 7999999975 99999998876643
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.95 E-value=0.00045 Score=50.67 Aligned_cols=111 Identities=12% Similarity=0.106 Sum_probs=77.0
Q ss_pred CCCCeEEEEecCC---eEEEEECCcccceeeeeEecCCCEEEEEEeCC--EEEEEec-CCc-EEEEEcCCCCC-CCCCCc
Q psy16019 3 SVLPTMWLGSQNG---SVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQG--RVVCALA-DGS-VAIFRRGPDGQ-WDLSKY 74 (121)
Q Consensus 3 ~~~~tvwiGt~~g---~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~--~v~v~La-nG~-l~Vy~r~~~g~-wd~~~~ 74 (121)
.....++.+.+++ .|++|+..+ .+.+..+..+..+.++.+..+ ++|++.. ++. +.+|+...+|. .+.. .
T Consensus 93 ~dg~~l~~~~~~~~~~~i~v~d~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~ 169 (331)
T 3u4y_A 93 PDDQFAVTVTGLNHPFNMQSYSFLK--NKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-Q 169 (331)
T ss_dssp TTSSEEEECCCSSSSCEEEEEETTT--TEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-E
T ss_pred CCCCEEEEecCCCCcccEEEEECCC--CCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-C
Confidence 4455677655553 899999887 466777777777888888754 6888755 488 99998776553 2222 2
Q ss_pred eEEEeCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcE---EEEEE
Q psy16019 75 HTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDV---IRPVT 119 (121)
Q Consensus 75 ~~i~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i---~~~~~ 119 (121)
..+..+ ...+++... ++.+|+++. +.|.++|..+++. .+.++
T Consensus 170 ~~~~~~---~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 170 EFISGG---TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp EEECSS---SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred ccccCC---CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc
Confidence 333333 345777776 457999885 6899999999987 65554
No 142
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.93 E-value=0.00018 Score=58.61 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=75.5
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEE-
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT- 78 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~- 78 (121)
+.....+..|++||.|.+|+......++++...+++.|.++.+.. ..+.+|..||++.+|+.... .+.+.
T Consensus 457 spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~-------~~~~~~ 529 (611)
T 1nr0_A 457 SNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN-------FELAHT 529 (611)
T ss_dssp CTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT-------TEESCC
T ss_pred eCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC-------Cceeee
Confidence 345678999999999999998763222344456778999999975 47888999999999965432 22211
Q ss_pred --eCCCCCceeEeeeeC--CEEEEEeC-CeEEEEeCCCCc
Q psy16019 79 --LGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 79 --lg~~~~pV~~m~~v~--~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
.+....+|.++.... +.|..|+. +.|++.|.++.+
T Consensus 530 ~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 530 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred eeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 221247999999884 56777777 689999988754
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.91 E-value=8.4e-05 Score=54.57 Aligned_cols=108 Identities=12% Similarity=0.134 Sum_probs=70.8
Q ss_pred CCCeEEEEe-cCCeEEEEECCcccceeeeeEecCC-------CEEEEEEeC--CEEEEEecC------------CcEEEE
Q psy16019 4 VLPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKD-------SVLNIVHVQ--GRVVCALAD------------GSVAIF 61 (121)
Q Consensus 4 ~~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~-------~V~~i~~~~--~~v~v~Lan------------G~l~Vy 61 (121)
....+|+.. .++.|++|+... .+.+..+.++. .+.++.+.. .++|++..+ +.|.+|
T Consensus 53 dg~~~~v~~~~~~~i~~~d~~t--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~ 130 (349)
T 1jmx_B 53 DNRTAYVLNNHYGDIYGIDLDT--CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 130 (349)
T ss_dssp TSSEEEEEETTTTEEEEEETTT--TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred CCCEEEEEeCCCCcEEEEeCCC--CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEE
Confidence 345677765 589999999876 45666666643 266777763 478888865 899998
Q ss_pred EcCCCCCCCCCCceEEEeCCCCCceeEeeee-CCEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16019 62 RRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 62 ~r~~~g~wd~~~~~~i~lg~~~~pV~~m~~v-~~~lw~~~gn~I~Vi~~~tl~i~~~~~ 119 (121)
+...+. ......... .| ..+.++... ++++|++ ++.|+++|+.++++.+.++
T Consensus 131 d~~~~~--~~~~~~~~~--~~-~~~~~~~~s~dg~l~~~-~~~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 131 STADGL--EAKPVRTFP--MP-RQVYLMRAADDGSLYVA-GPDIYKMDVKTGKYTVALP 183 (349)
T ss_dssp EGGGGG--GBCCSEEEE--CC-SSCCCEEECTTSCEEEE-SSSEEEECTTTCCEEEEEC
T ss_pred ECCCcc--ccceeeecc--CC-CcccceeECCCCcEEEc-cCcEEEEeCCCCceecccc
Confidence 543211 011112222 22 356777766 3448885 6669999999999887765
No 144
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.91 E-value=0.00043 Score=49.71 Aligned_cols=100 Identities=5% Similarity=0.051 Sum_probs=65.9
Q ss_pred CCeEEEEec-CCeEEEEECCcccceeeeeEecC---CCEEEEEEe-CCEEEEEe-cCCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 5 LPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLK---DSVLNIVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 5 ~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~---~~V~~i~~~-~~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
.+.+|+++. ++.|++|+... + ...+.++ ..+.+|... ++++|++. .++.|.+|.. ++ ....+.
T Consensus 193 ~g~l~v~~~~~~~i~~~~~~g---~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~--~g-----~~~~~~ 261 (299)
T 2z2n_A 193 DDALWFVEIIGNKIGRITTSG---E-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS--NN-----IIEEYP 261 (299)
T ss_dssp TSSEEEEETTTTEEEEECTTC---C-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET--TT-----EEEEEE
T ss_pred CCCEEEEccCCceEEEECCCC---c-EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC--CC-----ceEEEe
Confidence 357999985 78999999832 2 2234454 578888876 56899998 6788999954 12 112233
Q ss_pred eCCCCCceeEeeeeCCEEEEEe-CCeEEEEeCCCCcEE
Q psy16019 79 LGLPHHSVRSLAAVYNKVWCGY-KNKIHVVDPKSLDVI 115 (121)
Q Consensus 79 lg~~~~pV~~m~~v~~~lw~~~-gn~I~Vi~~~tl~i~ 115 (121)
+......+++|...++.||++. .+.|..+++.+.++|
T Consensus 262 ~~~~~~~~~~i~~~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 262 IQIKSAEPHGICFDGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp CSSSSCCEEEEEECSSCEEEEETTTEEEEEEEC-----
T ss_pred CCCCCCccceEEecCCCEEEEecCCcEEEEEcCcccCC
Confidence 3322356778877668999997 589999999887654
No 145
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.90 E-value=0.00052 Score=57.62 Aligned_cols=102 Identities=14% Similarity=0.220 Sum_probs=70.0
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe--cCCCEEEEEE-eCCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeC-
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ--LKDSVLNIVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG- 80 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~--l~~~V~~i~~-~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg- 80 (121)
.+.+|+||.++.|+.|+.... +...... ....|.+|.. .++.+++|..++-|..|.... .+...+.
T Consensus 183 ~g~lwigt~~~Gl~~~~~~~~--~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~--------~~~~~~~~ 252 (795)
T 4a2l_A 183 GDQIYIGTSTDGLYTYSITQK--TFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKT--------KEIKNYLH 252 (795)
T ss_dssp TTEEEEEESSSCEEEEETTTC--CEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTT--------TEEEEECC
T ss_pred CCCEEEEECCCCEEEEeCCCC--eEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCC--------CeEEEeec
Confidence 578999999878999997652 2111111 1257888875 578999999765578885432 2221111
Q ss_pred -------CCCCceeEeeee-CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16019 81 -------LPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLDVIR 116 (121)
Q Consensus 81 -------~~~~pV~~m~~v-~~~lw~~~gn~I~Vi~~~tl~i~~ 116 (121)
-+...|++|... ++.||+|..+.|+++|+.+.+.++
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~ 296 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFAS 296 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEEEE
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeEEE
Confidence 123679999877 699999998899999998877654
No 146
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.90 E-value=0.00035 Score=58.37 Aligned_cols=102 Identities=15% Similarity=0.231 Sum_probs=68.5
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEE---Ee
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV---TL 79 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i---~l 79 (121)
.++.||+||++ .|+.|+.... +-.... ..+..|.+|...++.+++|..+| |..|....+ ....+ .-
T Consensus 72 ~~g~lWigT~~-Gl~~yd~~~~--~f~~~~~~~~~~i~~i~~~~g~lWigt~~G-l~~~~~~~~------~~~~~~~~~~ 141 (758)
T 3ott_A 72 DNTYLYMGTDN-GILVYNYRAD--RYEQPETDFPTDVRTMALQGDTLWLGALNG-LYTYQLQSR------KLTSFDTRRN 141 (758)
T ss_dssp TTTEEEEEETT-EEEEEETTTT--EECCCSCCCCSCEEEEEEETTEEEEEETTE-EEEEETTTC------CEEEECHHHH
T ss_pred CCCcEEEEeCC-CeEEEeCCCC--EEECcccCCCceEEEEEecCCcEEEEcCCc-ceeEeCCCC------eEEEeccCCC
Confidence 35689999986 4899997652 211111 12346888877889999999884 677754321 11111 01
Q ss_pred CCCCCceeEeeee-CCEEEEEeCCeEEEEeCCCCcEE
Q psy16019 80 GLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLDVI 115 (121)
Q Consensus 80 g~~~~pV~~m~~v-~~~lw~~~gn~I~Vi~~~tl~i~ 115 (121)
+.+...|++|... ++.||+|..+.++.+|+.+.+.+
T Consensus 142 ~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~ 178 (758)
T 3ott_A 142 GLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFE 178 (758)
T ss_dssp CCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEE
T ss_pred CcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceE
Confidence 2234678898877 68999999999999999887654
No 147
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.88 E-value=0.00014 Score=55.24 Aligned_cols=103 Identities=16% Similarity=0.134 Sum_probs=70.1
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEeCCEE-EEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQGRV-VCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~~~v-~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
+.....+-.|+++| +.||++.. .+.......+ -.+.++.+..+.+ ++|..||+|.+| |....+.+ .
T Consensus 28 s~dg~~la~g~~~~-~~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW--------d~~~~~~~~~ 96 (355)
T 3vu4_A 28 NQDQSCLILSTLKS-FEIYNVHP--VAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIW--------DDVKKQDVSR 96 (355)
T ss_dssp CTTSSEEEEECSSE-EEEEEETT--EEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEE--------ETTTTEEEEE
T ss_pred CCCCCEEEEEcCCE-EEEEecCC--cceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEE--------ECCCCcEEEE
Confidence 34556777888775 67999775 2333333333 3444555556665 667888999997 55444332 3
Q ss_pred eCCCCCceeEeeeeCCEEEEEeCCeEEEEeCCCC-cEEE
Q psy16019 79 LGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSL-DVIR 116 (121)
Q Consensus 79 lg~~~~pV~~m~~v~~~lw~~~gn~I~Vi~~~tl-~i~~ 116 (121)
+.. +.+|+++....+.+.++..++|++.|..+. +..+
T Consensus 97 ~~~-~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 134 (355)
T 3vu4_A 97 IKV-DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRIT 134 (355)
T ss_dssp EEC-SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSS
T ss_pred EEC-CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeE
Confidence 332 369999999999999999999999999887 4443
No 148
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.00035 Score=52.34 Aligned_cols=111 Identities=12% Similarity=0.079 Sum_probs=75.2
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEEEeCC----EEEEEecCCcEEEEEcCCCCCCCCCCceE-
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHT- 76 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~~----~v~v~LanG~l~Vy~r~~~g~wd~~~~~~- 76 (121)
.....+..|+.||.|.+|+......+++..+. +.+.|.++.+..+ .++.|..||+|.+|+......-+......
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 34567889999999999997653235677774 5589999999864 68889999999999654321101011112
Q ss_pred EEeCC-CCCceeEeeeeC-CEEEEEeC-CeEEEEeCCCCc
Q psy16019 77 VTLGL-PHHSVRSLAAVY-NKVWCGYK-NKIHVVDPKSLD 113 (121)
Q Consensus 77 i~lg~-~~~pV~~m~~v~-~~lw~~~g-n~I~Vi~~~tl~ 113 (121)
..+.. ...+|.++.... +.|..|+. +.|.+.|..+.+
T Consensus 243 ~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 243 AILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTE
T ss_pred eecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCc
Confidence 22322 247999998874 45666655 579999987764
No 149
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.85 E-value=0.00055 Score=57.19 Aligned_cols=101 Identities=19% Similarity=0.339 Sum_probs=66.9
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeE-----ecC-CCEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSI-----QLK-DSVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-----~l~-~~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.+.+|+||++ .|+.|+.... ....+ .+| ..|.+|... ++.+++|..+| |..|....+. ...+
T Consensus 112 ~g~lWigt~~-Gl~~~~~~~~---~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~------~~~~ 180 (758)
T 3ott_A 112 GDTLWLGALN-GLYTYQLQSR---KLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGK------FEGI 180 (758)
T ss_dssp TTEEEEEETT-EEEEEETTTC---CEEEECHHHHCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTE------EEEE
T ss_pred CCcEEEEcCC-cceeEeCCCC---eEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCc------eEEe
Confidence 5689999987 7999997652 22222 244 478888876 78999999876 6677433211 1111
Q ss_pred EeCC----CCCceeEeeeeC--CEEEEEeCCeEEEEeCCCCcEEE
Q psy16019 78 TLGL----PHHSVRSLAAVY--NKVWCGYKNKIHVVDPKSLDVIR 116 (121)
Q Consensus 78 ~lg~----~~~pV~~m~~v~--~~lw~~~gn~I~Vi~~~tl~i~~ 116 (121)
.... +...|++|.... +.||+|..+.++.+|+.+.++++
T Consensus 181 ~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~ 225 (758)
T 3ott_A 181 PLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQ 225 (758)
T ss_dssp CCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEE
T ss_pred cCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEe
Confidence 1111 123588888763 57999998889999998876653
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.79 E-value=0.001 Score=48.67 Aligned_cols=100 Identities=13% Similarity=0.048 Sum_probs=68.6
Q ss_pred CCeEE-EEecCCeEEEEECCcccceeeeeEecCC--CEEEEEEeC--CEEEEEe-cCCcEEEEEcCCCCCCCCCCceE--
Q psy16019 5 LPTMW-LGSQNGSVFVHSAVSQWRRCLHSIQLKD--SVLNIVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHT-- 76 (121)
Q Consensus 5 ~~tvw-iGt~~g~I~v~~~~~~~~~~l~~~~l~~--~V~~i~~~~--~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~-- 76 (121)
.+.++ .++.++.|++|+..+ .+.++++.++. .+..+.+.. +++|++. .+|.|.+| |++..+.
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~--------d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVAS--DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI--------DLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTT--TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEE--------ETTTTEEEE
T ss_pred CCEEEEEeCCCCeEEEEECCC--CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEE--------eCCCCcEEE
Confidence 34444 466899999999877 46777888876 677777763 3677776 57889998 4444433
Q ss_pred -EEeCCC----CCceeEeeee--CCEEEEEe-------------CCeEEEEeCCCCcE
Q psy16019 77 -VTLGLP----HHSVRSLAAV--YNKVWCGY-------------KNKIHVVDPKSLDV 114 (121)
Q Consensus 77 -i~lg~~----~~pV~~m~~v--~~~lw~~~-------------gn~I~Vi~~~tl~i 114 (121)
+.++.. ...++++... ++.|+++. .+.|+++|..+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 344331 1225666665 56888887 58999999998543
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.76 E-value=0.00077 Score=49.09 Aligned_cols=109 Identities=15% Similarity=0.126 Sum_probs=72.2
Q ss_pred CCCCCeEEEEecC-CeEEEEECC--cccceeeeeEecCCCEEEEEEeC--CEEEEEec-CCcEEEEEcCCCCCCCCCCce
Q psy16019 2 TSVLPTMWLGSQN-GSVFVHSAV--SQWRRCLHSIQLKDSVLNIVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYH 75 (121)
Q Consensus 2 ~~~~~tvwiGt~~-g~I~v~~~~--~~~~~~l~~~~l~~~V~~i~~~~--~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~ 75 (121)
+.....++++..+ +.|.+|+.. ....+.+..+..+..+.++.+.. .++|++.. +|.|.+|+.. +| ...+
T Consensus 46 spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~-~~----~~~~ 120 (343)
T 1ri6_A 46 SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE-DG----LPVG 120 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE-TT----EEEE
T ss_pred CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC-CC----cccc
Confidence 3455678888876 999999986 32234556667677788888864 36888775 7889999553 22 1122
Q ss_pred EE-EeCCCCCceeEeeee--CCEEEEEe-C-CeEEEEeCCC-CcEEE
Q psy16019 76 TV-TLGLPHHSVRSLAAV--YNKVWCGY-K-NKIHVVDPKS-LDVIR 116 (121)
Q Consensus 76 ~i-~lg~~~~pV~~m~~v--~~~lw~~~-g-n~I~Vi~~~t-l~i~~ 116 (121)
.+ .+.. ...+.++... ++.|++++ + +.|.++|..+ .++..
T Consensus 121 ~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 121 VVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp EEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred ccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 22 2222 2356677666 46899887 4 7899999887 66653
No 152
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.73 E-value=0.00048 Score=54.89 Aligned_cols=105 Identities=11% Similarity=0.124 Sum_probs=73.3
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEe-----------cCC--CEEEEEEeCCEEEEEecC----------CcEEEE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-----------LKD--SVLNIVHVQGRVVCALAD----------GSVAIF 61 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-----------l~~--~V~~i~~~~~~v~v~Lan----------G~l~Vy 61 (121)
.+.++.-+.+|.+++++......+..+.+. .|+ ....+.-..+++||++.+ ..|.|+
T Consensus 237 dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 237 AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 345556888999999998764334444443 132 233443346899999852 469999
Q ss_pred EcCCCCCCCCCCceE---EEeCCCCCceeEeeee--CC-EEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 62 RRGPDGQWDLSKYHT---VTLGLPHHSVRSLAAV--YN-KVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 62 ~r~~~g~wd~~~~~~---i~lg~~~~pV~~m~~v--~~-~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
|+...++ |.+|. ++..|.+. ++ .||.+++ +.|.|||+.|+++.++++.
T Consensus 317 --------D~~t~kv~~~i~vg~---~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 317 --------DAKTGERLAKFEMGH---EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp --------ETTTCCEEEEEEEEE---EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred --------ECCCCeEEEEEECCC---CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC
Confidence 7777765 56766 55666766 33 6888886 7899999999999998864
No 153
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.72 E-value=0.0011 Score=52.84 Aligned_cols=106 Identities=14% Similarity=0.043 Sum_probs=76.6
Q ss_pred CCCCeEEEEec-----CCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec----------CCcEEEEEcCC
Q psy16019 3 SVLPTMWLGSQ-----NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA----------DGSVAIFRRGP 65 (121)
Q Consensus 3 ~~~~tvwiGt~-----~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La----------nG~l~Vy~r~~ 65 (121)
.....+|+..+ ++.+++++... .+.+.+++.....- |... ..++||+.. ++.|.||
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t--~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi---- 114 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEA--GRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVF---- 114 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTT--TEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE----
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCC--CeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEE----
Confidence 34568999987 68999999987 67788887764333 6665 457999973 5679998
Q ss_pred CCCCCCCCceE---EEeCC-C-----CCceeEeeee--CCEEEEEeC---CeEEEEeCCCCcEEEEEEe
Q psy16019 66 DGQWDLSKYHT---VTLGL-P-----HHSVRSLAAV--YNKVWCGYK---NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 66 ~g~wd~~~~~~---i~lg~-~-----~~pV~~m~~v--~~~lw~~~g---n~I~Vi~~~tl~i~~~~~~ 120 (121)
|....+. |.++. . ..| +.+.+. ++.||+++. +.|.|||+.|+++.+++++
T Consensus 115 ----D~~t~~v~~~I~v~~g~r~~~g~~P-~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 115 ----DPVTLLPTADIELPDAPRFLVGTYP-WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp ----CTTTCCEEEEEEETTCCCCCBSCCG-GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred ----ECCCCeEEEEEECCCccccccCCCC-ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 6666654 55643 0 123 234443 789999973 7899999999999999875
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.71 E-value=0.0014 Score=47.98 Aligned_cols=107 Identities=12% Similarity=0.008 Sum_probs=73.1
Q ss_pred CCeEEE-EecCCeEEEEECCcccceeeeeEecC-CCEEEEEEeC--CEEEEEec-CCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 5 LPTMWL-GSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 5 ~~tvwi-Gt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~--~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.+.+|+ +..++.|.+|+... .+.+..+..+ ..+ ++.+.. +++|++.. ++.|.+|....+. + ....+..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~---~-~~~~~~~ 81 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDT--LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP---P-KVVAIQE 81 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTT--CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS---C-EEEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcc--cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc---e-eEEeccc
Confidence 445554 45689999999876 4556666665 455 777753 46888877 8899998554321 0 0233555
Q ss_pred CCCCCceeEeeee--CCEEEEEeCC----eEEEEeCCCCcEEEEEEe
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYKN----KIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~gn----~I~Vi~~~tl~i~~~~~~ 120 (121)
+. .|..++... ++.|+++.+. .|.++|.++.++.+.++.
T Consensus 82 ~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 82 GQ--SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp CS--SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred CC--CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence 55 676645655 5788877776 899999999999887653
No 155
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.70 E-value=0.00099 Score=48.67 Aligned_cols=106 Identities=4% Similarity=-0.078 Sum_probs=68.0
Q ss_pred CCCCeEEEEecCCeEEEEECCcccc--eeeeeEe-cCCCEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWR--RCLHSIQ-LKDSVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~--~~l~~~~-l~~~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
.....+|.++.++.|++|+....-+ .....+. .+..+..|... ++++||+. +|.|.+|+. +...+-.
T Consensus 181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~--------~g~~~~~ 251 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTP--------DGDELGR 251 (296)
T ss_dssp TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECT--------TSCEEEE
T ss_pred CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECC--------CCCEEEE
Confidence 3455677888889999999752101 0011221 12344456654 66899999 888999843 2222223
Q ss_pred eCCCCCceeEeeee---CCEEEEEeCCeEEEEeCCCCcEEEEE
Q psy16019 79 LGLPHHSVRSLAAV---YNKVWCGYKNKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 79 lg~~~~pV~~m~~v---~~~lw~~~gn~I~Vi~~~tl~i~~~~ 118 (121)
+..+.. +.++... ++.||++..+.++-+++++.++||..
T Consensus 252 ~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~~~~~ 293 (296)
T 3e5z_A 252 VLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGLEHHH 293 (296)
T ss_dssp EECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCBCCC--
T ss_pred EECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEcccccccccc
Confidence 333324 6777764 36899999999999999999999854
No 156
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.68 E-value=0.0016 Score=49.90 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=67.8
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEec-----------CCC--EEEEEEeCCEEEEEec-C----------CcEEEE
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-----------KDS--VLNIVHVQGRVVCALA-D----------GSVAIF 61 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-----------~~~--V~~i~~~~~~v~v~La-n----------G~l~Vy 61 (121)
..+|..+.+|.+++++......+....+++ |.. .+.+.-..+++||+.. | ++|.||
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 467778888999999976532222233322 211 1222223479999876 3 368887
Q ss_pred EcCCCCCCCCCCceEE---EeCCCCCceeEeeee--CCEEEEEeCCeEEEEeCCCC--cEEEEE
Q psy16019 62 RRGPDGQWDLSKYHTV---TLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSL--DVIRPV 118 (121)
Q Consensus 62 ~r~~~g~wd~~~~~~i---~lg~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~tl--~i~~~~ 118 (121)
|+...+.+ .++. ...|++. ++.||+++++.|.|||++|+ ++.+++
T Consensus 292 --------D~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 292 --------DTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp --------ETTTTEEEEEEECTT----CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEE
T ss_pred --------ECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEe
Confidence 67776664 4443 6677766 68999999999999999999 888775
No 157
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.66 E-value=0.0012 Score=53.13 Aligned_cols=105 Identities=14% Similarity=0.038 Sum_probs=77.2
Q ss_pred CCCeEEEEecC-----CeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec----------CCcEEEEEcCCC
Q psy16019 4 VLPTMWLGSQN-----GSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA----------DGSVAIFRRGPD 66 (121)
Q Consensus 4 ~~~tvwiGt~~-----g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La----------nG~l~Vy~r~~~ 66 (121)
..+.+|+..+. +.|.+|+... .+.+.++++.... .|.+. ..++||+.. ++.|.||
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t--~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi----- 154 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGST--GRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF----- 154 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTT--TEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE-----
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCC--CEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEE-----
Confidence 34578888874 6999999988 6788889887444 77776 457999973 6789999
Q ss_pred CCCCCCCceE---EEeCCC------CCceeEeee--eCCEEEEEe---CCeEEEEeCCCCcEEEEEEe
Q psy16019 67 GQWDLSKYHT---VTLGLP------HHSVRSLAA--VYNKVWCGY---KNKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 67 g~wd~~~~~~---i~lg~~------~~pV~~m~~--v~~~lw~~~---gn~I~Vi~~~tl~i~~~~~~ 120 (121)
|....+. |.++.+ ..| +-|.+ -++.||+++ .+.|.|||+.++++.+++++
T Consensus 155 ---D~~t~~vv~~I~v~g~~r~~~g~~P-~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 155 ---DPVTFLPIADIELPDAPRFLVGTYQ-WMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp ---CTTTCCEEEEEEETTCCCCCBSCCG-GGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred ---ECCCCcEEEEEECCCccccccCCCc-ceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 6666544 667511 122 23344 368999987 36899999999999998875
No 158
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.60 E-value=0.00059 Score=56.41 Aligned_cols=113 Identities=21% Similarity=0.258 Sum_probs=76.5
Q ss_pred CCeEEEEe--cCCeEEEEECCccc-----ceeeeeEecCC-CEEEEEEeC--CEEEEEec-------CCcEEEEEcCCC-
Q psy16019 5 LPTMWLGS--QNGSVFVHSAVSQW-----RRCLHSIQLKD-SVLNIVHVQ--GRVVCALA-------DGSVAIFRRGPD- 66 (121)
Q Consensus 5 ~~tvwiGt--~~g~I~v~~~~~~~-----~~~l~~~~l~~-~V~~i~~~~--~~v~v~La-------nG~l~Vy~r~~~- 66 (121)
...+|.-+ .++.|.|++....- -+.+++++.+. .-+-|+.+. .++||... +++|+||.....
T Consensus 400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 479 (567)
T 1qks_A 400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMT 479 (567)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCC
T ss_pred CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccc
Confidence 35689765 36899999976521 24567777763 324455554 48999884 359999976532
Q ss_pred --CCCCCCCceEEEeC------CCCCceeEeeee--CCEEEEEeC------CeEEEEeCCCCcEEEEEE
Q psy16019 67 --GQWDLSKYHTVTLG------LPHHSVRSLAAV--YNKVWCGYK------NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 67 --g~wd~~~~~~i~lg------~~~~pV~~m~~v--~~~lw~~~g------n~I~Vi~~~tl~i~~~~~ 119 (121)
|. + ..++++.++ .....++.+.+. +++||++++ +.|.|+|.+|++++++++
T Consensus 480 ~~g~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 480 GDGS-D-PEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp CSSS-C-CCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred cccc-C-CCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 10 1 223666552 223566777777 689999954 889999999999999875
No 159
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.59 E-value=0.00089 Score=49.52 Aligned_cols=111 Identities=14% Similarity=0.207 Sum_probs=68.2
Q ss_pred CCeEEEEe------------cCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec-CCcEEEEEcC-CCCC
Q psy16019 5 LPTMWLGS------------QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA-DGSVAIFRRG-PDGQ 68 (121)
Q Consensus 5 ~~tvwiGt------------~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La-nG~l~Vy~r~-~~g~ 68 (121)
.+.+|+|+ ..+.|+.++...........+ .....|.+. .+.+|++-. ++.|.+|+.+ .+|.
T Consensus 108 dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~---~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 108 AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV---DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQ 184 (297)
T ss_dssp TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE---SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCC
T ss_pred CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc---ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCc
Confidence 45699998 346788887653211111122 223455665 346877655 6889999764 4442
Q ss_pred CCCCCceE-EEeCCCCCceeEeeee-CCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 69 WDLSKYHT-VTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 69 wd~~~~~~-i~lg~~~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
+.+.+. ..+.........|++. ++.||+++. ++|.++|++|+++.+.+++
T Consensus 185 --~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 185 --ISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp --EEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred --ccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 222233 3443322345677775 579999974 6799999999999887764
No 160
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.59 E-value=0.0049 Score=44.04 Aligned_cols=100 Identities=12% Similarity=0.188 Sum_probs=67.2
Q ss_pred CCCeEEEEec-CCeEEEEECCcccceeeeeEecC---CCEEEEEEe-CCEEEEEec-CCcEEEEEcCCCCCCCCCCceEE
Q psy16019 4 VLPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLK---DSVLNIVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 4 ~~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~---~~V~~i~~~-~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
..+.+|+++. ++.|++|+... + ...+.++ ..+.+|... ++.+|++.. +|.|..|+.. + ....+
T Consensus 24 ~~g~l~v~~~~~~~v~~~d~~~---~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g-----~~~~~ 92 (299)
T 2z2n_A 24 DKGKVWITQHKANMISCINLDG---K-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK--G-----IIKEY 92 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTTC---C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--S-----CEEEE
T ss_pred CCCCEEEEecCCCcEEEEcCCC---C-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC--C-----cEEEE
Confidence 3568999997 68999999763 2 2333333 578888874 568898876 6888888432 2 12334
Q ss_pred EeCCCCCceeEeeee-CCEEEEEeC--CeEEEEeCCCCcEE
Q psy16019 78 TLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLDVI 115 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~tl~i~ 115 (121)
.+..+...+..|+.. ++.||++.. +.|+++|+ +.++.
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 443223456777776 588999873 68999998 66554
No 161
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.57 E-value=0.0033 Score=48.89 Aligned_cols=101 Identities=10% Similarity=0.064 Sum_probs=66.4
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEec-----------CCCEEEEEE--eCCEEEEEecC----------CcEEEEE
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-----------KDSVLNIVH--VQGRVVCALAD----------GSVAIFR 62 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-----------~~~V~~i~~--~~~~v~v~Lan----------G~l~Vy~ 62 (121)
+.+|.-+.+|.+++++......+.+..+.+ |+...-+.. ..+++||++.+ +.|.|+
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI- 303 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV- 303 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE-
Confidence 345555678899999986532233344433 333322333 35799999864 479999
Q ss_pred cCCCCCCCCCCceE---EEeCCCCCceeEeeee--CC-EEEEEeC--CeEEEEeCCCCcEEEE
Q psy16019 63 RGPDGQWDLSKYHT---VTLGLPHHSVRSLAAV--YN-KVWCGYK--NKIHVVDPKSLDVIRP 117 (121)
Q Consensus 63 r~~~g~wd~~~~~~---i~lg~~~~pV~~m~~v--~~-~lw~~~g--n~I~Vi~~~tl~i~~~ 117 (121)
|++..+. |.++. . ...|.+. ++ .+|.+.. |.|.|||+.|+++.++
T Consensus 304 -------D~~t~~vv~~i~~g~--~-p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 304 -------TGLVGQTSSQISLGH--D-VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred -------ECCCCEEEEEEECCC--C-cCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 6666655 56655 3 3456666 45 5777763 8999999999999988
No 162
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0018 Score=52.73 Aligned_cols=104 Identities=14% Similarity=0.096 Sum_probs=70.8
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEe-cCCCEEEEE--EeC---CEEEEEecCCcEEEEEcCCCCCCCCCCce---E
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIV--HVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYH---T 76 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~--~~~---~~v~v~LanG~l~Vy~r~~~g~wd~~~~~---~ 76 (121)
+.+..|+.||.|.+|+..+. +.....++ +.++|.++. +.. ..+..|..||++-+| |+.+.+ .
T Consensus 278 ~~lasgs~DgtV~lWD~~~~-~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklW--------D~~~~~~~~~ 348 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDP-EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIF--------NPKDIATTKT 348 (524)
T ss_dssp SEEEEEETTSEEEEEETTBC-SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEE--------CGGGHHHHCE
T ss_pred CeEEEEeCCCEEEEEECCCC-CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEE--------ECCCCCcccc
Confidence 57899999999999999863 23344455 347999993 443 356778889999997 665542 2
Q ss_pred EEeCCCCCceeEeeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 77 VTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v~--~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
+.-..+..+|.++.... ..+.+|.+ +.|.+.|..+++..+.|
T Consensus 349 ~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l 393 (524)
T 2j04_B 349 TVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL 393 (524)
T ss_dssp EEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEE
T ss_pred cccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceee
Confidence 32111113577888774 45555555 57999999998765554
No 163
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.0013 Score=53.69 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=70.1
Q ss_pred CCeEEEEecCCeEEEEECCcccc---------eeeeeEec-CCCEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWR---------RCLHSIQL-KDSVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSK 73 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~---------~~l~~~~l-~~~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~ 73 (121)
.+.+-.|+.||.|.+|++..... +....+.. .+.|+|+.+. ++.+++|..||+|.+|+..... ..
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~----~~ 300 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPE----VP 300 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCS----SC
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCC----Cc
Confidence 35777899999999999875311 11224433 3789999985 4689999999999998543210 11
Q ss_pred ceEEEeCCCCCceeEee--eeC-C-E-EEEEeC-CeEEEEeCCCCcEEE
Q psy16019 74 YHTVTLGLPHHSVRSLA--AVY-N-K-VWCGYK-NKIHVVDPKSLDVIR 116 (121)
Q Consensus 74 ~~~i~lg~~~~pV~~m~--~v~-~-~-lw~~~g-n~I~Vi~~~tl~i~~ 116 (121)
...+.... .+|+++. ... + . |.-|+. +.|.+.|..+.+..+
T Consensus 301 ~~~~~~H~--~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 301 SFYDQVHD--SYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp SEEEECSS--SCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC
T ss_pred eEEeeccc--ccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc
Confidence 23345545 8999994 333 3 4 444554 689999998765433
No 164
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.54 E-value=0.0053 Score=45.18 Aligned_cols=103 Identities=11% Similarity=0.094 Sum_probs=65.8
Q ss_pred CeEE-EEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEe-CCEEEEEecCC-----cEEEEEcCCCCCCCCCCce-E
Q psy16019 6 PTMW-LGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHV-QGRVVCALADG-----SVAIFRRGPDGQWDLSKYH-T 76 (121)
Q Consensus 6 ~tvw-iGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~-~~~v~v~LanG-----~l~Vy~r~~~g~wd~~~~~-~ 76 (121)
+.+| .++.++.|++|+... .+..... ..+..+.+|... ++++|++..++ .|.+|+.... ... +
T Consensus 56 g~l~~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~------~~~~~ 127 (333)
T 2dg1_A 56 GQLFLLDVFEGNIFKINPET--KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD------NLQDI 127 (333)
T ss_dssp SCEEEEETTTCEEEEECTTT--CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC------SCEEE
T ss_pred CCEEEEECCCCEEEEEeCCC--CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC------EEEEE
Confidence 4576 578899999999765 2322222 234789999886 55788887654 7888743221 111 2
Q ss_pred EEeCCCCCceeEeeee-CCEEEEEeC--------CeEEEEeCCCCcEEE
Q psy16019 77 VTLGLPHHSVRSLAAV-YNKVWCGYK--------NKIHVVDPKSLDVIR 116 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v-~~~lw~~~g--------n~I~Vi~~~tl~i~~ 116 (121)
+.-..+...+..+... ++.+|++.. ..|+.+|+++.+++.
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP 176 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE
Confidence 2111123467777776 578999875 479999998876654
No 165
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.53 E-value=0.00095 Score=48.59 Aligned_cols=109 Identities=15% Similarity=0.187 Sum_probs=69.9
Q ss_pred CCeEEEE-ecCCeEEEEECCcc-cceeeeeEecCCCEEEEEEe--CCEEEEEecC-CcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 5 LPTMWLG-SQNGSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 5 ~~tvwiG-t~~g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~--~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
...++++ ..+|.|++|+.... ..+.+..+..+..+.++.+. +.++|++..+ |.|.+|....++ .....+ .
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~----~~~~~~~~ 79 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD----GALTFAAE 79 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT----CCEEEEEE
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC----Cceeeccc
Confidence 3466777 67999999998532 12455666777788888886 3468888887 999999654211 122222 2
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC--CeEEEEeC---CCCcEEEEE
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP---KSLDVIRPV 118 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~---~tl~i~~~~ 118 (121)
+..+ ..+.++... ++.||+++. +.|.++|. .+.+..+.+
T Consensus 80 ~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 125 (343)
T 1ri6_A 80 SALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 125 (343)
T ss_dssp EECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred cccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc
Confidence 2222 255666665 567888774 67999998 444444443
No 166
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.49 E-value=0.003 Score=49.81 Aligned_cols=98 Identities=9% Similarity=0.046 Sum_probs=64.5
Q ss_pred CCeEEEEecCCeEEEEECCcccceeee-eEecCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLH-SIQLKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL 81 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~-~~~l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~ 81 (121)
...+..|+.||.|.+|+.... +... ...+.+.|.++.++ +.++++|..||+|.+| |........+..
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~--~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iw--------d~~~~~~~~~~~ 231 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTET--VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQY--------LPTLQEKKVIPC 231 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSS--EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEE--------CTTCCEEEEECC
T ss_pred CCEEEEEECCCeEEEEEcCCC--cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEE--------ccCCcccccccC
Confidence 456788999999999998874 3333 23455799999997 4589999999999998 444211222211
Q ss_pred C-------CCceeEeeeeCCEEEE---EeC-------CeEEEEeCCCC
Q psy16019 82 P-------HHSVRSLAAVYNKVWC---GYK-------NKIHVVDPKSL 112 (121)
Q Consensus 82 ~-------~~pV~~m~~v~~~lw~---~~g-------n~I~Vi~~~tl 112 (121)
+ ..+|.++...++..++ +.+ ..+++.+..+.
T Consensus 232 ~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 232 PPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 1 1277788877655544 323 23777776654
No 167
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.47 E-value=0.0048 Score=46.98 Aligned_cols=99 Identities=13% Similarity=0.024 Sum_probs=66.6
Q ss_pred CCCeEEEEecCC----eEEEEECCccccee--eeeEe-cCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCc
Q psy16019 4 VLPTMWLGSQNG----SVFVHSAVSQWRRC--LHSIQ-LKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 4 ~~~tvwiGt~~g----~I~v~~~~~~~~~~--l~~~~-l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~ 74 (121)
....+..|+.++ .+..++........ ...+. ...+|+++.+.. ..+.+|..||+|.|| |+.+.
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw--------d~~~~ 301 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV--------KLKDL 301 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE--------ETTTT
T ss_pred CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE--------ECCCC
Confidence 344566777666 56677765532222 23332 347899999874 468889999999997 77777
Q ss_pred eEE-EeCC-CCCceeEeeeeC--CEEEEEeC-CeEEEEeCC
Q psy16019 75 HTV-TLGL-PHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 110 (121)
Q Consensus 75 ~~i-~lg~-~~~pV~~m~~v~--~~lw~~~g-n~I~Vi~~~ 110 (121)
+.+ ++-. -..+|++++... +.|.-|+. +.|+|.+..
T Consensus 302 ~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 302 SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 665 3322 248999999883 55666666 689999964
No 168
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.46 E-value=0.0065 Score=44.02 Aligned_cols=100 Identities=9% Similarity=0.056 Sum_probs=65.7
Q ss_pred CCCeEEEE--------ecCCeEEEEECCcccceeeeeEec------CCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCC
Q psy16019 4 VLPTMWLG--------SQNGSVFVHSAVSQWRRCLHSIQL------KDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDG 67 (121)
Q Consensus 4 ~~~tvwiG--------t~~g~I~v~~~~~~~~~~l~~~~l------~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g 67 (121)
..+.+|++ +.++.|++|+..+. + ...+.. ...+.+|.... +++|++..++.|.+|+.. |
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g--~-~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~--g 101 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTG--K-KTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD--G 101 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTC--C-EEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT--S
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCC--c-EEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC--C
Confidence 34578888 78999999986552 2 223322 25678888764 689999887778888543 2
Q ss_pred CCCCCCceEEEe------CCCCCceeEeeee-CCEEEEEeC-----------------CeEEEEeCCCCcEEE
Q psy16019 68 QWDLSKYHTVTL------GLPHHSVRSLAAV-YNKVWCGYK-----------------NKIHVVDPKSLDVIR 116 (121)
Q Consensus 68 ~wd~~~~~~i~l------g~~~~pV~~m~~v-~~~lw~~~g-----------------n~I~Vi~~~tl~i~~ 116 (121)
+...+ +.+...+++|+.. ++.+|++.. +.|+.+|+. .+++.
T Consensus 102 -------~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 102 -------TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp -------CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred -------CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 12222 1112346777776 578999886 479999987 66554
No 169
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.44 E-value=0.0028 Score=47.03 Aligned_cols=100 Identities=12% Similarity=0.109 Sum_probs=69.7
Q ss_pred CeEEEEecCCeEEEEECCcccc-eeeeeEe-cCCCEEEEEEeC------CEEEEEecCCcEEEEEcCCC--CCCCCCCce
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWR-RCLHSIQ-LKDSVLNIVHVQ------GRVVCALADGSVAIFRRGPD--GQWDLSKYH 75 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~-~~l~~~~-l~~~V~~i~~~~------~~v~v~LanG~l~Vy~r~~~--g~wd~~~~~ 75 (121)
..+..|++||.|.+|+.....+ +++..++ +.+.|.++.+.. ..+..|..||+|.+|+.... +.|. .+
T Consensus 180 ~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~---~~ 256 (316)
T 3bg1_A 180 KRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS---PK 256 (316)
T ss_dssp CBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB---CC
T ss_pred ceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchh---hh
Confidence 4688899999999999864211 3455554 458999999875 46888999999999965431 2121 23
Q ss_pred EEEeCCCCCceeEeeee--CCEEEEEeC-CeEEEEeCC
Q psy16019 76 TVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPK 110 (121)
Q Consensus 76 ~i~lg~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~~ 110 (121)
.+.-- ..+|.++... ++.|..|+. +.|.+.+..
T Consensus 257 ~~~~~--~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 257 LLHKF--NDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEC--SSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred hhhcC--CCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 33322 3799999877 466777776 579999865
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.41 E-value=0.015 Score=41.89 Aligned_cols=102 Identities=8% Similarity=0.083 Sum_probs=66.4
Q ss_pred CCeEEEE-ecCCeEEEEECCcccceeeeeEecC-------CCEEEEEE--eCCEEEEEec--CCcEEEEEcCCCCCCCCC
Q psy16019 5 LPTMWLG-SQNGSVFVHSAVSQWRRCLHSIQLK-------DSVLNIVH--VQGRVVCALA--DGSVAIFRRGPDGQWDLS 72 (121)
Q Consensus 5 ~~tvwiG-t~~g~I~v~~~~~~~~~~l~~~~l~-------~~V~~i~~--~~~~v~v~La--nG~l~Vy~r~~~g~wd~~ 72 (121)
.+.+|++ +.++.|++|+... +.+..+..+ ..+.+|.. .++++||+.. ++.|.+|.. +
T Consensus 40 ~g~l~v~~~~~~~i~~~d~~g---~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~--------~ 108 (286)
T 1q7f_A 40 QNDIIVADTNNHRIQIFDKEG---RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ--------Y 108 (286)
T ss_dssp TCCEEEEEGGGTEEEEECTTS---CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT--------T
T ss_pred CCCEEEEECCCCEEEEECCCC---cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC--------C
Confidence 3568887 5789999999764 334444321 36778887 3679999985 889999842 1
Q ss_pred CceEEEeCCC-CCceeEeeee-CCEEEEEeC--CeEEEEeCCCCcEEEEE
Q psy16019 73 KYHTVTLGLP-HHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 73 ~~~~i~lg~~-~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~tl~i~~~~ 118 (121)
....-.++.+ ...++.|+.. ++.+|++.. ++|+++|+. .+..+.+
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 157 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKF 157 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEe
Confidence 1122234332 2345777776 467999874 689999975 4555544
No 171
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.38 E-value=0.0029 Score=52.05 Aligned_cols=108 Identities=12% Similarity=0.180 Sum_probs=75.1
Q ss_pred CCeEEEEec-CCeEEEEEC-CcccceeeeeEecCCC--E----------EEEEEeCCEEEEEecCCcEEEEEcCCCC-CC
Q psy16019 5 LPTMWLGSQ-NGSVFVHSA-VSQWRRCLHSIQLKDS--V----------LNIVHVQGRVVCALADGSVAIFRRGPDG-QW 69 (121)
Q Consensus 5 ~~tvwiGt~-~g~I~v~~~-~~~~~~~l~~~~l~~~--V----------~~i~~~~~~v~v~LanG~l~Vy~r~~~g-~w 69 (121)
.++|++++. ++.|+.+++ .+ -+.+++.+++.. + ....+.+++||++..||.|..++...+. .|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~t--G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDP--GKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCT--TSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCC--ccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 468999999 899999998 55 366777765521 0 1245678999999999999999765433 35
Q ss_pred CCCCceEEEeCCC--CCcee-EeeeeCCEEEEEeC-------CeEEEEeCCCCcEEEEEEe
Q psy16019 70 DLSKYHTVTLGLP--HHSVR-SLAAVYNKVWCGYK-------NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 70 d~~~~~~i~lg~~--~~pV~-~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~~~~~~ 120 (121)
.. .++.+ ...+. +-.+.++.|+++++ +.|+.+|++|+++.-+++.
T Consensus 140 ~~------~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 140 EV------EVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EE------ECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred Ee------cCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 32 23221 01222 12346899999885 6899999999999877653
No 172
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.37 E-value=0.01 Score=44.04 Aligned_cols=108 Identities=10% Similarity=0.113 Sum_probs=72.2
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEecCC--CEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKD--SVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~--~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
++..+.++.|++++.|++++..+ -+.++++..+. .+.++... ++++|+ ..++.|..|.+...-.|.+.
T Consensus 2 ~~~~~~lv~~~~~~~v~~~d~~t--G~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~------ 72 (276)
T 3no2_A 2 SSPQHLLVGGSGWNKIAIINKDT--KEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIA------ 72 (276)
T ss_dssp -CCCEEEEECTTCSEEEEEETTT--TEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEE------
T ss_pred CCCCcEEEeeCCCCEEEEEECCC--CeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEc------
Confidence 46678999999999999999856 47788888764 56666664 557777 45777888866222234432
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC-C-eEEEEeCCCCcEEEEEEe
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK-N-KIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g-n-~I~Vi~~~tl~i~~~~~~ 120 (121)
.+. ...+.+.... ++.+.+.++ + +|+.+|+ ++++..++.+
T Consensus 73 ~~~-~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~ 116 (276)
T 3no2_A 73 APA-GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEF 116 (276)
T ss_dssp CCT-TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEE
T ss_pred CCC-CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEec
Confidence 221 1355555544 456666666 4 7888987 7888877764
No 173
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.37 E-value=0.002 Score=54.01 Aligned_cols=108 Identities=11% Similarity=0.055 Sum_probs=76.2
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCCC------------EEEEEEeCCEEEEEecCCcEEEEEcCCCC-CCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDS------------VLNIVHVQGRVVCALADGSVAIFRRGPDG-QWDL 71 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~------------V~~i~~~~~~v~v~LanG~l~Vy~r~~~g-~wd~ 71 (121)
.++|++++.++.|+.+++.+ -+.+++.+.+.. -..+.+.+++||++..||.|..++...+. .|..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~t--G~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRT--GNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTT--TEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCC--CcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 46899999999999999876 467787765421 12345688999999999999999765443 3543
Q ss_pred CCceEEEeC-CC--CCcee-EeeeeCCEEEEEeC-------CeEEEEeCCCCcEEEEEEe
Q psy16019 72 SKYHTVTLG-LP--HHSVR-SLAAVYNKVWCGYK-------NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 72 ~~~~~i~lg-~~--~~pV~-~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~~~~~~ 120 (121)
..+ ++ ..++. .-.+.++.++++.+ +.|+.+|++|+++.-+++.
T Consensus 155 ------~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 155 ------NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp ------ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred ------cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 222 10 01222 22356899999874 6899999999999877653
No 174
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.017 Score=48.39 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=75.6
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeEecCC------CEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCC
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKD------SVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSK 73 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~------~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~ 73 (121)
+.....+-.|+.||.+.||+... ++..+. +. +|.++.++ +..+++|..||+|-+|+...+ .+.+
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~---~l~~ 165 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN---SENT 165 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC---TTTC
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC---cccc
Confidence 34566788999999999999443 455555 43 59999987 458999999999999976542 2334
Q ss_pred c-----eEEEeCC--CCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcE
Q psy16019 74 Y-----HTVTLGL--PHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDV 114 (121)
Q Consensus 74 ~-----~~i~lg~--~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i 114 (121)
| +.+..+. ...+|.+++...+.+.++.. +.|++.|..+.++
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSS
T ss_pred ccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCcc
Confidence 4 2233222 24699999999655766666 7899999988773
No 175
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.00017 Score=56.65 Aligned_cols=109 Identities=14% Similarity=0.181 Sum_probs=73.4
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC--CCEEEEEE----eCCEEEEE--ecCCcEEEEEcCCCCC--CCCCCc
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK--DSVLNIVH----VQGRVVCA--LADGSVAIFRRGPDGQ--WDLSKY 74 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~--~~V~~i~~----~~~~v~v~--LanG~l~Vy~r~~~g~--wd~~~~ 74 (121)
.+.|++||.||.|+-++..+ =+.+|+++.+ .+++.... .++.+|+. ..||.|..|.... |. |...-+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~t--G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRN--GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTT--TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEECCC--CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEEeeeccc
Confidence 56899999999999999876 4778888776 34433221 13467777 6899999997643 32 221111
Q ss_pred eEEEeCCCCCceeE---eee-------eCCEEEEEeC-CeEEEEeCCCCcEEEEEEe
Q psy16019 75 HTVTLGLPHHSVRS---LAA-------VYNKVWCGYK-NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 75 ~~i~lg~~~~pV~~---m~~-------v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~~ 120 (121)
.++ . ..|++. ..+ .++.+++|.. .+++.||+.|+++..++..
T Consensus 87 ~lv--~--~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 87 QLV--S--TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHH--T--TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cce--e--ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 111 1 245542 112 5788999888 6899999999999988753
No 176
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.35 E-value=0.011 Score=43.98 Aligned_cols=109 Identities=15% Similarity=0.088 Sum_probs=69.5
Q ss_pred CCCCeEEEEe-cCCeEEEEECCcccceeeeeEec-C---CCEEEEEEe--CCEEEEEecC--CcEEEEEcCC-CCCCCCC
Q psy16019 3 SVLPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQL-K---DSVLNIVHV--QGRVVCALAD--GSVAIFRRGP-DGQWDLS 72 (121)
Q Consensus 3 ~~~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l-~---~~V~~i~~~--~~~v~v~Lan--G~l~Vy~r~~-~g~wd~~ 72 (121)
.....+++.. .++.|.+|+..+...+.+..+.. + ..+.+|.+. +.++|++..+ +.|.+|+... +|.+ .
T Consensus 220 pdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~--~ 297 (361)
T 3scy_A 220 SDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL--T 297 (361)
T ss_dssp TTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE--E
T ss_pred CCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE--E
Confidence 4455788888 58999999977532223444432 2 245677776 3468888775 8899997652 2321 1
Q ss_pred CceEEEeCCCCCceeEeeee--CCEEEEEeC--CeEEE--EeCCCCcEEE
Q psy16019 73 KYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHV--VDPKSLDVIR 116 (121)
Q Consensus 73 ~~~~i~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~V--i~~~tl~i~~ 116 (121)
....+..+ ..+++|... ++.|++++. +.|.+ +|+++++++.
T Consensus 298 ~~~~~~~g---~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 298 KVGYQLTG---IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEEEECS---SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EeeEecCC---CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 11123332 456677776 567999984 67777 7888988765
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.35 E-value=0.0039 Score=44.33 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=61.7
Q ss_pred CCeEEE-E-ecCCeEEEEECCcccceeeeeEecC--CCEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 5 LPTMWL-G-SQNGSVFVHSAVSQWRRCLHSIQLK--DSVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 5 ~~tvwi-G-t~~g~I~v~~~~~~~~~~l~~~~l~--~~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.+.+|+ + +.++.|++|+.... + ...+... ..+.+|... ++.+|++..+|.|.+|.... .....+
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~--~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~--------~~~~~~ 102 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGST--G-TTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGS--------NNQTVL 102 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTC--------SCCEEC
T ss_pred CCCEEEEccCCCCcEEEecCCCc--c-cceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCC--------ceEeee
Confidence 456999 7 67899999986552 1 1222122 356677776 45799998888999985432 111122
Q ss_pred CCC-CCceeEeeee-CCEEEEEeC--CeEEEEeCCCCcE
Q psy16019 80 GLP-HHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLDV 114 (121)
Q Consensus 80 g~~-~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~tl~i 114 (121)
... ....+.|+.. ++.||++.. ++|++++..+...
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence 211 1455777776 567999874 6899998776554
No 178
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.34 E-value=0.0032 Score=50.59 Aligned_cols=104 Identities=12% Similarity=0.133 Sum_probs=70.4
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEe-----------cCCCE--EEEEEeCCEEEEEecC----------CcEEE
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQ-----------LKDSV--LNIVHVQGRVVCALAD----------GSVAI 60 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~-----------l~~~V--~~i~~~~~~v~v~Lan----------G~l~V 60 (121)
....+|.-+.+|.+++++......+....+. .|... ..+.-..+++||+..+ ++|.|
T Consensus 275 dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsV 354 (426)
T 3c75_H 275 RSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVV 354 (426)
T ss_dssp TTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEE
Confidence 3467888899999999997653222222222 12221 2333345799999864 47999
Q ss_pred EEcCCCCCCCCCCceE---EEeCCCCCceeEeeee--CC-EEEEEeC--CeEEEEeCCCCcEEEEE
Q psy16019 61 FRRGPDGQWDLSKYHT---VTLGLPHHSVRSLAAV--YN-KVWCGYK--NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 61 y~r~~~g~wd~~~~~~---i~lg~~~~pV~~m~~v--~~-~lw~~~g--n~I~Vi~~~tl~i~~~~ 118 (121)
+ |+...+. |.+|. .| ..|.+. ++ .++.++. +.|.|||+.|+++.+++
T Consensus 355 I--------D~~T~kvv~~I~vg~--~P-~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 355 L--------NAETGERINKIELGH--EI-DSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp E--------ETTTCCEEEEEEEEE--EE-CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred E--------ECCCCeEEEEEECCC--Cc-CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9 6666655 56666 33 355555 56 7888884 89999999999999987
No 179
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.34 E-value=0.0051 Score=47.17 Aligned_cols=112 Identities=7% Similarity=0.015 Sum_probs=67.6
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeCC---EEEEEecCCcEEEEEcCCCCC-CCCCCc------e
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQG---RVVCALADGSVAIFRRGPDGQ-WDLSKY------H 75 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~---~v~v~LanG~l~Vy~r~~~g~-wd~~~~------~ 75 (121)
..+--|++|+.|.||++.+. ++....+.++++|+++.++.+ ++.+|..||+|.+|+-..... ...... .
T Consensus 157 ~~las~s~D~tv~~Wd~~~~-~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~ 235 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRLTDE-GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPW 235 (393)
T ss_dssp EEEEEEETTSEEEEEEEETT-EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCC
T ss_pred CEEEEEECCCeEEEEECCCC-ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccce
Confidence 46778899999999998762 233445578899999999853 588899999999996543211 000000 0
Q ss_pred EE-----------EeCCCCCceeEeeee---CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16019 76 TV-----------TLGLPHHSVRSLAAV---YNKVWCGYK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 76 ~i-----------~lg~~~~pV~~m~~v---~~~lw~~~g-n~I~Vi~~~tl~i~~~~ 118 (121)
.+ .......+|.++... ++.|..++. +.|.+.|..+.+..+.+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l 293 (393)
T 4gq1_A 236 LLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI 293 (393)
T ss_dssp SEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------
T ss_pred EEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE
Confidence 00 111123677787765 467777776 68999998887665544
No 180
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.33 E-value=0.004 Score=43.81 Aligned_cols=95 Identities=11% Similarity=-0.016 Sum_probs=62.5
Q ss_pred ecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC-CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEe--CCCCCceeE
Q psy16019 12 SQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL--GLPHHSVRS 88 (121)
Q Consensus 12 t~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~-~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l--g~~~~pV~~ 88 (121)
..++.|++|+... .+.......+..|.++.+.. ++.++...+|.|.+|+.... .+...+ +....++.+
T Consensus 19 ~~~~~i~~~d~~~--~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~ 89 (297)
T 2ojh_A 19 SMRSSIEIFNIRT--RKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGD-------PSPEKVDTGFATICNND 89 (297)
T ss_dssp CCCEEEEEEETTT--TEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSC-------CSCEECCCTTCCCBCSC
T ss_pred CcceeEEEEeCCC--CceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCC-------CCceEeccccccccccc
Confidence 3578999999877 34444456678999999874 34444456999999854321 222222 222357777
Q ss_pred eeee--CCEEEEEe-----CCeEEEEeCCCCcEE
Q psy16019 89 LAAV--YNKVWCGY-----KNKIHVVDPKSLDVI 115 (121)
Q Consensus 89 m~~v--~~~lw~~~-----gn~I~Vi~~~tl~i~ 115 (121)
+... ++.|+++. ..+|+.++..+.+..
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~ 123 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR 123 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCceE
Confidence 7766 57788877 368999998876643
No 181
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.32 E-value=0.019 Score=40.86 Aligned_cols=100 Identities=9% Similarity=0.225 Sum_probs=67.1
Q ss_pred CCCeEEEEec-CCeEEEEECCcccceeeeeEecC---CCEEEEEEe-CCEEEEEec-CCcEEEEEcCCCCCCCCCCceEE
Q psy16019 4 VLPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLK---DSVLNIVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 4 ~~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~---~~V~~i~~~-~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
..+.+|+++. ++.|++|+... + ...+.++ ..+.+|... ++.+|++.. +|.|..|... |. ...+
T Consensus 29 ~~g~l~v~~~~~~~v~~~~~~~---~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~-----~~~~ 97 (300)
T 2qc5_A 29 EDGKVWFTQHKANKISSLDQSG---R-IKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GG-----FTEY 97 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTTS---C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SC-----EEEE
T ss_pred CCCCEEEEcCCCCeEEEECCCC---c-eEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CC-----eEEe
Confidence 3568999994 79999999763 1 2224444 467788775 467999886 6788888433 21 1223
Q ss_pred EeCCCCCceeEeeee-CCEEEEEeC--CeEEEEeCCCCcEE
Q psy16019 78 TLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLDVI 115 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~tl~i~ 115 (121)
.+......+.+|+.. ++.+|++.. +.|+.+|+. .++.
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 333222456777776 588999884 689999987 6655
No 182
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.32 E-value=0.0011 Score=52.17 Aligned_cols=104 Identities=9% Similarity=0.003 Sum_probs=67.2
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEec-----------CCC--EEEEEEeCCEEEEEec-C-C-------cEEEEE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL-----------KDS--VLNIVHVQGRVVCALA-D-G-------SVAIFR 62 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l-----------~~~--V~~i~~~~~~v~v~La-n-G-------~l~Vy~ 62 (121)
.+.+|..+. |.+++++......+....+.+ |.. ...+.-..+++||++. + | .+.|+
T Consensus 222 ~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~Vi- 299 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV- 299 (368)
T ss_dssp TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEE-
T ss_pred CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEE-
Confidence 345666667 999999986532233333322 211 1223334579999976 4 3 56687
Q ss_pred cCCCCCCCCCCceE---EEeCCCCCceeEeeee--CCEEEEEeC---CeEEEEeCCCCcEEEEEEe
Q psy16019 63 RGPDGQWDLSKYHT---VTLGLPHHSVRSLAAV--YNKVWCGYK---NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 63 r~~~g~wd~~~~~~---i~lg~~~~pV~~m~~v--~~~lw~~~g---n~I~Vi~~~tl~i~~~~~~ 120 (121)
|+...+. |.+|. ....|.+. ++.+|++++ |.|.|||+.|+++.+++++
T Consensus 300 -------D~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 300 -------TASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp -------ESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred -------ECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 6766655 46655 34466666 456888774 7999999999999998865
No 183
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.32 E-value=0.019 Score=41.32 Aligned_cols=103 Identities=8% Similarity=0.110 Sum_probs=67.3
Q ss_pred CCCeEEEEec--CCeEEEEECCcccceeeeeEecC--CCEEEEEEe-CCEEEEEe-cCCcEEEEEcCCCCCCCCCCceEE
Q psy16019 4 VLPTMWLGSQ--NGSVFVHSAVSQWRRCLHSIQLK--DSVLNIVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 4 ~~~tvwiGt~--~g~I~v~~~~~~~~~~l~~~~l~--~~V~~i~~~-~~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
..+.+|++.. ++.|++|+... +.+..+..+ ..+.+|... ++++||+. .++.|.+|.. +.....
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d~~g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~--------~g~~~~ 155 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYNQYG---QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ--------NGNVLH 155 (286)
T ss_dssp TTTEEEEEECGGGCEEEEECTTS---CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT--------TSCEEE
T ss_pred CCCeEEEEcCCCCCEEEEECCCC---cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC--------CCCEEE
Confidence 4678999985 78999999443 445555443 467788875 45788885 4688999842 222233
Q ss_pred EeCC--CCCceeEeeee-CCEEEEEeC--CeEEEEeCCCCcEEEEE
Q psy16019 78 TLGL--PHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 78 ~lg~--~~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~tl~i~~~~ 118 (121)
.++. ....++.|+.. ++++|++.. +.|+++|+.. +..+.+
T Consensus 156 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~ 200 (286)
T 1q7f_A 156 KFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQI 200 (286)
T ss_dssp EEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEE
T ss_pred EeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEE
Confidence 3432 12345778777 478999874 7899999854 444433
No 184
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.31 E-value=0.01 Score=44.57 Aligned_cols=100 Identities=15% Similarity=0.136 Sum_probs=64.5
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEE-eC--
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LG-- 80 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~-lg-- 80 (121)
+...|+++.++.|+.|+.... ....+.++..|.+|... +++++++..+| |.+|+... | ....+. ..
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~---~~~~~~~~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~-g-----~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASG---RKTVHALPFMGSALAKISDSKQLIASDDG-LFLRDTAT-G-----VLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTT---EEEEEECSSCEEEEEEEETTEEEEEETTE-EEEEETTT-C-----CEEEEECSSTT
T ss_pred CEEEEEECCCCEEEEEECCCC---cEEEEECCCcceEEEEeCCCeEEEEECCC-EEEEECCC-C-----cEEEEeeCCCC
Confidence 457889999999999998762 23345677889898864 67899998766 77774321 1 112221 11
Q ss_pred CCCCceeEeeee-CCEEEEEeC--------CeEEEEeCCCCcEEE
Q psy16019 81 LPHHSVRSLAAV-YNKVWCGYK--------NKIHVVDPKSLDVIR 116 (121)
Q Consensus 81 ~~~~pV~~m~~v-~~~lw~~~g--------n~I~Vi~~~tl~i~~ 116 (121)
.+...+..+... .+.+|++.. ..|+.++ ++++..
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~ 173 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK 173 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE
T ss_pred CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE
Confidence 112346666665 467999874 4799998 555543
No 185
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.30 E-value=0.01 Score=46.09 Aligned_cols=58 Identities=10% Similarity=-0.089 Sum_probs=35.2
Q ss_pred CCCCCeEEEEec--CCeEEEEECCcccceeeee-EecCCCEEEEEEeCCEE-EEEecCCcEEEEEc
Q psy16019 2 TSVLPTMWLGSQ--NGSVFVHSAVSQWRRCLHS-IQLKDSVLNIVHVQGRV-VCALADGSVAIFRR 63 (121)
Q Consensus 2 ~~~~~tvwiGt~--~g~I~v~~~~~~~~~~l~~-~~l~~~V~~i~~~~~~v-~v~LanG~l~Vy~r 63 (121)
+.....+|++.+ ++.|.+++ .+ .+.+.+ +.+|..+. +.-..++. ++...||.+.++..
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QG--GSSDDQLLSSPTCYH-IHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CC--CCEEeEEcCCCceEE-EEeCCCceEEEEcCCCCEEEEEC
Confidence 456778999985 57899999 66 466777 77775432 11222223 33345666665543
No 186
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.26 E-value=0.0046 Score=51.67 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=75.2
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEecCCCE------------EEEEEeCCEEEEEecCCcEEEEEcCCCC-CCC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSV------------LNIVHVQGRVVCALADGSVAIFRRGPDG-QWD 70 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V------------~~i~~~~~~v~v~LanG~l~Vy~r~~~g-~wd 70 (121)
..++|++++.+|.|+.+++.+ =+.+++++.+... -...+.+++||++..||.|..++...+. .|.
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~t--G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAAS--GKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTT--CCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCC--ChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 356899999999999999876 3667777654210 1235578899999999999999765443 354
Q ss_pred CCCceEEEeCCC--CCcee-EeeeeCCEEEEEeC-------CeEEEEeCCCCcEEEEEE
Q psy16019 71 LSKYHTVTLGLP--HHSVR-SLAAVYNKVWCGYK-------NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 71 ~~~~~~i~lg~~--~~pV~-~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~~~~~ 119 (121)
.+ .+++ ...+. .-.+.++.++++++ ..|+.+|++|+++.-+++
T Consensus 143 ~~------~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 143 QQ------TTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EE------CSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ec------cCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 32 2221 01111 12346899999875 589999999999987775
No 187
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.24 E-value=0.00015 Score=56.04 Aligned_cols=106 Identities=18% Similarity=0.208 Sum_probs=52.8
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEE-EEeCCEEEEE-ecCCcEEEEEcCCC-CCCCCCC--ceEEE
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNI-VHVQGRVVCA-LADGSVAIFRRGPD-GQWDLSK--YHTVT 78 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i-~~~~~~v~v~-LanG~l~Vy~r~~~-g~wd~~~--~~~i~ 78 (121)
..+.|++|+.+|.|+.++..+ -+.+++++. +.+.+. ...++.+|++ ..||.|..|+...+ ..|.... +..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~t--G~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~- 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRT--GSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV- 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTT--CCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH-
T ss_pred eCCEEEEEcCCCEEEEEECCC--CCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc-
Confidence 467999999999999999877 466777766 433332 2234545554 79999999977543 3343221 1110
Q ss_pred eCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.. .|+. ..++.|++|+. +.|+.+|++|+++..+++
T Consensus 84 -~~--sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~ 119 (369)
T 2hz6_A 84 -QA--SPCR---SSDGILYMGKKQDIWYVIDLLTGEKQQTLS 119 (369)
T ss_dssp -TT--CSCC--------CCCCEEEEEEEEECCC---------
T ss_pred -cc--CceE---ecCCEEEEEeCCCEEEEEECCCCcEEEEec
Confidence 11 2321 13566666655 468888888877765543
No 188
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.21 E-value=0.035 Score=43.00 Aligned_cols=104 Identities=6% Similarity=-0.036 Sum_probs=68.1
Q ss_pred CCCCeEEEEecCC---eEEEEECCcccceeeeeEecCCCEEEEEEeCC--EEE-EEecCCc--EEEEEcCCCCCCCCCCc
Q psy16019 3 SVLPTMWLGSQNG---SVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQG--RVV-CALADGS--VAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 3 ~~~~tvwiGt~~g---~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~--~v~-v~LanG~--l~Vy~r~~~g~wd~~~~ 74 (121)
.....+..++.++ .|++|+.... ++..-...+..+.++.+..+ +++ ++..+|. |.+| |++..
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~tg--~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~--------d~~~~ 257 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLANG--AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM--------DLASG 257 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTC--CEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE--------ETTTC
T ss_pred CCCCEEEEEEecCCCcEEEEEECCCC--cEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEE--------ECCCC
Confidence 4455677777664 9999998863 33332345678999998743 344 5556666 5555 44444
Q ss_pred eEEEeCCCCCceeEeeee--CCEEEEEeC-C---eEEEEeCCCCcEEE
Q psy16019 75 HTVTLGLPHHSVRSLAAV--YNKVWCGYK-N---KIHVVDPKSLDVIR 116 (121)
Q Consensus 75 ~~i~lg~~~~pV~~m~~v--~~~lw~~~g-n---~I~Vi~~~tl~i~~ 116 (121)
+...+......+.++... ++.|++++. + +|+++|..+.+.++
T Consensus 258 ~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~ 305 (415)
T 2hqs_A 258 QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR 305 (415)
T ss_dssp CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE
T ss_pred CEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE
Confidence 444554434678888776 567888775 2 79999999887543
No 189
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.14 E-value=0.029 Score=40.43 Aligned_cols=106 Identities=8% Similarity=-0.034 Sum_probs=67.5
Q ss_pred CCeEEEEec---CCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecC-CcEEEEEcCCCCCCCCCCc-eEE
Q psy16019 5 LPTMWLGSQ---NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKY-HTV 77 (121)
Q Consensus 5 ~~tvwiGt~---~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~-~~i 77 (121)
.+.+|+... .+.|++++.....++.+....+ .....|... ++++|++-.. +.|.+|..... .. .++
T Consensus 133 ~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~------~~~~~~ 205 (267)
T 1npe_A 133 RGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP------GRRKVL 205 (267)
T ss_dssp TTEEEEEECCSSSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTEE------EEEEEE
T ss_pred CCEEEEEECCCCCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC------ceEEEe
Confidence 567777664 3688888866532222211111 234566665 4689998865 67999854311 11 122
Q ss_pred EeCCCCCceeEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 78 TLGLPHHSVRSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
.-+ ..| ..|++.++.||++.. ++|+++|+.++++.+.+.+
T Consensus 206 ~~~--~~P-~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 206 EGL--QYP-FAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp ECC--CSE-EEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred cCC--CCc-eEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 322 256 467777899999886 6999999999999888754
No 190
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.13 E-value=0.033 Score=39.65 Aligned_cols=101 Identities=12% Similarity=0.116 Sum_probs=66.1
Q ss_pred CCCeEEEEec-CCeEEEEECCcccceeeeeEecC---CCEEEEEEe-CCEEEEEec-CCcEEEEEcCCCCCCCCCCceEE
Q psy16019 4 VLPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLK---DSVLNIVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 4 ~~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~---~~V~~i~~~-~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
..+.+|+++. ++.|+.|+... + ...+.+| ..+.+|... ++.+|++.. +|.|..|... | ....+
T Consensus 71 ~~g~l~v~~~~~~~v~~~d~~g--~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g-----~~~~~ 139 (300)
T 2qc5_A 71 SLGDIWFTENGANKIGKLSKKG--G--FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--G-----TIYEY 139 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTTS--C--EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--S-----CEEEE
T ss_pred CCCCEEEEecCCCeEEEECCCC--C--eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC--C-----CEEEc
Confidence 3467999986 68899998764 2 1234444 467788776 578999876 6788888432 2 11123
Q ss_pred EeCCCCCceeEeeee-CCEEEEEeC--CeEEEEeCCCCcEEE
Q psy16019 78 TLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLDVIR 116 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~tl~i~~ 116 (121)
.+..+...++.|... .+.||++.. +.|+++|+ +.+...
T Consensus 140 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~ 180 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE 180 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred cCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE
Confidence 333223456777765 467999884 68999998 666543
No 191
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.12 E-value=0.023 Score=41.94 Aligned_cols=110 Identities=12% Similarity=0.023 Sum_probs=66.8
Q ss_pred CCCCeEEEE-ecCCeEEEEECCcccc--eeeeeEe-cC------CCEEEEEEeC--CEEEEEec-CCcEEEEEcCCCCCC
Q psy16019 3 SVLPTMWLG-SQNGSVFVHSAVSQWR--RCLHSIQ-LK------DSVLNIVHVQ--GRVVCALA-DGSVAIFRRGPDGQW 69 (121)
Q Consensus 3 ~~~~tvwiG-t~~g~I~v~~~~~~~~--~~l~~~~-l~------~~V~~i~~~~--~~v~v~La-nG~l~Vy~r~~~g~w 69 (121)
.....+++. ..++.|.+|+...... +.+..+. +| ..+..+.+.. .++||+.. ++.|.+|+...+|.
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~- 274 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH- 274 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC-
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc-
Confidence 344557774 5688999998664111 2233332 33 2377777764 36887764 79999997654331
Q ss_pred CCCCceEEEeCCCCCceeEeeee--CCEEEEEeC--CeEEEE--eCCCCcEEE
Q psy16019 70 DLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVV--DPKSLDVIR 116 (121)
Q Consensus 70 d~~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi--~~~tl~i~~ 116 (121)
+.....+..+. ..++.++.. ++.|++++. +.|.++ |+++++++.
T Consensus 275 -~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 275 -LTLIQQISTEG--DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp -EEEEEEEECSS--SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred -EEEeEEEecCC--CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 11112233322 345677766 567999886 577777 888888774
No 192
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.09 E-value=0.011 Score=45.27 Aligned_cols=103 Identities=13% Similarity=-0.025 Sum_probs=66.9
Q ss_pred eEEEEecCCeEEEEECCcccce---eeeeEe-cCCCEEEEEEeC----------CEEEEEecCCcEEEEEcCCCCCCCCC
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRR---CLHSIQ-LKDSVLNIVHVQ----------GRVVCALADGSVAIFRRGPDGQWDLS 72 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~---~l~~~~-l~~~V~~i~~~~----------~~v~v~LanG~l~Vy~r~~~g~wd~~ 72 (121)
.+-.|++|+.|.+|+....... .+..++ +.+.|.++.+.. ..+..|..|+++.|| |+.
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W--------d~~ 174 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW--------RLT 174 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE--------EEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE--------ECC
Confidence 4677889999999997763211 122232 457999999862 356667789999997 554
Q ss_pred Cc-eEEEeCCCCCceeEeeeeC---CEEEEEeC-CeEEEEeCCCCcEEEE
Q psy16019 73 KY-HTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLDVIRP 117 (121)
Q Consensus 73 ~~-~~i~lg~~~~pV~~m~~v~---~~lw~~~g-n~I~Vi~~~tl~i~~~ 117 (121)
.. ....+-.-..||.++.... +.|..|+. +.|.+.|..+.+....
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~ 224 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEE 224 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccc
Confidence 33 2222211237999999884 34666766 5799999998776543
No 193
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.07 E-value=0.00027 Score=54.61 Aligned_cols=107 Identities=8% Similarity=0.128 Sum_probs=56.5
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCC-CCCCCCceEEEeCCC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLP 82 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g-~wd~~~~~~i~lg~~ 82 (121)
..+.+++|+.+|.|+.++..+ -+.++++..+..+ ...-.++.+|++..||.|..|+...+. .|..+.. ...
T Consensus 91 ~~~~v~~g~~dg~v~a~D~~t--G~~~w~~~~~~~~-~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~---~~~-- 162 (369)
T 2hz6_A 91 SDGILYMGKKQDIWYVIDLLT--GEKQQTLSSAFAD-SLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF---DYA-- 162 (369)
T ss_dssp ----CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE---EEC--
T ss_pred cCCEEEEEeCCCEEEEEECCC--CcEEEEecCCCcc-cccccCCEEEEEecCCEEEEEECCCCCEEEeEecc---ccc--
Confidence 356789999999999999886 3566776655422 112267799999999999999765433 3653211 111
Q ss_pred CCceeEe-eeeCCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 83 HHSVRSL-AAVYNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 83 ~~pV~~m-~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
.|+-.- ...++.+++++. +.|+.+|+.|+++.-+++
T Consensus 163 -~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 163 -ASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp -CBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred -CccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 121100 011277888887 689999999999876654
No 194
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.06 E-value=0.04 Score=41.05 Aligned_cols=104 Identities=15% Similarity=0.197 Sum_probs=67.3
Q ss_pred eEEEE-ecCCeEEEEECCcccceeeeeEec-------C---CCEEEEEEe--CCEEEEEec--CCcEEEEEcCCCCCCCC
Q psy16019 7 TMWLG-SQNGSVFVHSAVSQWRRCLHSIQL-------K---DSVLNIVHV--QGRVVCALA--DGSVAIFRRGPDGQWDL 71 (121)
Q Consensus 7 tvwiG-t~~g~I~v~~~~~~~~~~l~~~~l-------~---~~V~~i~~~--~~~v~v~La--nG~l~Vy~r~~~g~wd~ 71 (121)
.+|+. +.++.|++|+..... ..+..+.- + ..+..|... ++.+||+-+ ++.|.+|..
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-------- 173 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-------- 173 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT--------
T ss_pred CEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC--------
Confidence 46665 457899999876521 13343321 1 257788887 578999984 899999942
Q ss_pred CCceEEEeCCCC----------CceeEeeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEE
Q psy16019 72 SKYHTVTLGLPH----------HSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 72 ~~~~~i~lg~~~----------~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i~~~~~ 119 (121)
+...+..++... ...+.|++. ++.||++.. ++|.++|+++++..+.+.
T Consensus 174 ~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 174 SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 222222333210 124677776 379999886 689999999888887763
No 195
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.05 E-value=0.0071 Score=50.73 Aligned_cols=108 Identities=14% Similarity=0.156 Sum_probs=74.7
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCCC-----------E-EEEEEeCCEEEEEecCCcEEEEEcCCCC-CCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDS-----------V-LNIVHVQGRVVCALADGSVAIFRRGPDG-QWDL 71 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~-----------V-~~i~~~~~~v~v~LanG~l~Vy~r~~~g-~wd~ 71 (121)
.++|++++.++.|+.+++.+ =+.+++++.+.. + ....+.+++||++..||.|..++...+. .|..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~t--G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARD--GRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTT--CCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCC--CceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 56899999999999999876 366777765421 0 1235678999999999999999775543 3653
Q ss_pred CCceEEEeCCC--CCcee-EeeeeCCEEEEEeC-------CeEEEEeCCCCcEEEEEE
Q psy16019 72 SKYHTVTLGLP--HHSVR-SLAAVYNKVWCGYK-------NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 72 ~~~~~i~lg~~--~~pV~-~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~~~~~ 119 (121)
+.. . ++ ...+. +-.+.++.++++++ +.|+.+|++|+++.=+++
T Consensus 148 ~~~----~-~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 148 DTR----A-DHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp ECC----S-CTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred cCc----C-CCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 221 0 11 01111 12346899999874 589999999999887665
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.05 E-value=0.014 Score=43.23 Aligned_cols=104 Identities=10% Similarity=-0.025 Sum_probs=60.4
Q ss_pred CCeEEEEec-CCeEEEEECCcccceeeeeEecCCC-------EE--EEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCc
Q psy16019 5 LPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLKDS-------VL--NIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 5 ~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~~~-------V~--~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~ 74 (121)
..++...+. +++++.++... +.++++.+... .. ......+.+++...||.|.+|.+...-.|..
T Consensus 88 G~~lv~~~~~~~~v~~vd~~G---k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~--- 161 (276)
T 3no2_A 88 GNALVAWCGHPSTILEVNMKG---EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSV--- 161 (276)
T ss_dssp SCEEEEEESTTEEEEEECTTS---CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEE---
T ss_pred CCEEEEecCCCCEEEEEeCCC---CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEE---
Confidence 345555555 78888887644 45565554311 11 2223456677777899999996541112332
Q ss_pred eEEEeCCCCCceeEeeeeCCE-EEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 75 HTVTLGLPHHSVRSLAAVYNK-VWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 75 ~~i~lg~~~~pV~~m~~v~~~-lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
..+. .|-......++. +.++.+ ++|+.+|+.|+++..++.
T Consensus 162 ---~~~~--~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 162 ---KLSG--TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp ---ECSS--CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred ---ECCC--CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 2222 333333333444 444554 479999999999988775
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.04 E-value=0.0042 Score=45.24 Aligned_cols=99 Identities=13% Similarity=0.140 Sum_probs=58.2
Q ss_pred CCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEeee
Q psy16019 14 NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA 91 (121)
Q Consensus 14 ~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m~~ 91 (121)
.+.|+.++.....+. .......+..|... .+.+++...++.|.+|+...+|... ...+.+ ......++.|+.
T Consensus 152 ~~~l~~~~~~g~~~~---~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-~~~~~~--~~~~~~p~~i~~ 225 (296)
T 3e5z_A 152 GRWVFRLAPDGTLSA---PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE-YQGVHF--TVEPGKTDGLRV 225 (296)
T ss_dssp SCEEEEECTTSCEEE---EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE-EEEEEE--CCSSSCCCSEEE
T ss_pred CcEEEEECCCCCEEE---eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-CCCeEe--eCCCCCCCeEEE
Confidence 468888876531111 11222345566665 3345555667899999766444210 122333 112234456776
Q ss_pred e-CCEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16019 92 V-YNKVWCGYKNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 92 v-~~~lw~~~gn~I~Vi~~~tl~i~~~~~ 119 (121)
. ++.||++.++.|.++|++ ++....+.
T Consensus 226 d~~G~l~v~~~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 226 DAGGLIWASAGDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp BTTSCEEEEETTEEEEECTT-SCEEEEEE
T ss_pred CCCCCEEEEcCCeEEEECCC-CCEEEEEE
Confidence 6 578999999999999997 66666554
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.99 E-value=0.017 Score=40.93 Aligned_cols=101 Identities=12% Similarity=0.075 Sum_probs=63.3
Q ss_pred CCeEEEEec-CCeEEEEECCcccceeeeeEecC-CCEEEEEEeC-CEEEEEec-CCcEEEEEcCCCCCCCCCCceEEEeC
Q psy16019 5 LPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHVQ-GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLG 80 (121)
Q Consensus 5 ~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~~-~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~i~lg 80 (121)
.+.+|+++. ++.|++|+.... +.......+ ..+.+|.... +.+|++.. ++.|.+|.... .......
T Consensus 160 ~g~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~--------~~~~~~~ 229 (270)
T 1rwi_B 160 SGNVYVTDTDNNRVVKLEAESN--NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS--------TTSTVLP 229 (270)
T ss_dssp TCCEEEEEGGGTEEEEECTTTC--CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC--------SCCEECC
T ss_pred CCCEEEEECCCCEEEEEecCCC--ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC--------Ccceeec
Confidence 346999875 689999997763 221111112 4677888764 48999875 67899985432 1111121
Q ss_pred CC-CCceeEeeee-CCEEEEEeC--CeEEEEeCCCCcEE
Q psy16019 81 LP-HHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLDVI 115 (121)
Q Consensus 81 ~~-~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~tl~i~ 115 (121)
.. ...+.+|+.. +++||++.. ++|.+++...-+.+
T Consensus 230 ~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 230 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSC
T ss_pred cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcccc
Confidence 11 1345677765 467999876 78999988765543
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.98 E-value=0.03 Score=44.36 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=71.1
Q ss_pred CCCCCeEEEEecCCeEEEEECCccc---------ceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCC
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQW---------RRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLS 72 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~---------~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~ 72 (121)
++..+.+..|+.+ ++.|+++.+-. -+....+.+|+ |..+.+.++.++|+ .+|.|.+|+-.+- .
T Consensus 46 s~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~sl-----~ 117 (388)
T 1xip_A 46 SNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLEEL-----S 117 (388)
T ss_dssp ETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEE-ESSEEEEEESSST-----T
T ss_pred cCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEchhh-----h
Confidence 3456677788876 56668865532 12234567889 99999977788888 9999999954321 1
Q ss_pred CceEEEeCCCCCceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEE
Q psy16019 73 KYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIR 116 (121)
Q Consensus 73 ~~~~i~lg~~~~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~ 116 (121)
....+..-. .++.++......+.++.. +.++++|..+.+.++
T Consensus 118 ~~~~~~~~~--~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 118 EFRTVTSFE--KPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp CEEEEEECS--SCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ccCccceee--cceeeEEecCCCEEEEECCCCEEEEEccCCcccc
Confidence 222333333 577777777666776666 689999998877654
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.93 E-value=0.0067 Score=46.43 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=67.2
Q ss_pred CeEEEEe------cCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec----------CCcEEEEEcCCCC
Q psy16019 6 PTMWLGS------QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA----------DGSVAIFRRGPDG 67 (121)
Q Consensus 6 ~tvwiGt------~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La----------nG~l~Vy~r~~~g 67 (121)
..+++-. .|+.|++|+... .+.+.+++..... .|... ..++||+.. +++|.+|
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t--~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~------ 86 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTN--GKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVW------ 86 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTT--CCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEE------
T ss_pred CEEEEECCCCCccccCeEEEEECCC--CeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEE------
Confidence 4677754 367999999766 3556666655333 67776 448999973 5679998
Q ss_pred CCCCCCc---eEEEeCCC----CCceeEeeee--CCEEEEEe---CCeEEEEeCCCCcEEEE
Q psy16019 68 QWDLSKY---HTVTLGLP----HHSVRSLAAV--YNKVWCGY---KNKIHVVDPKSLDVIRP 117 (121)
Q Consensus 68 ~wd~~~~---~~i~lg~~----~~pV~~m~~v--~~~lw~~~---gn~I~Vi~~~tl~i~~~ 117 (121)
|.... ..+.++.. ......|.+. ++.||+++ .+.|.|||++++++.+.
T Consensus 87 --d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 87 --DADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp --ETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred --ECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 44433 33555421 0122345544 68999987 36899999999988776
No 201
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.92 E-value=0.037 Score=41.44 Aligned_cols=109 Identities=10% Similarity=0.074 Sum_probs=63.9
Q ss_pred CCeEEEEec-------CCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEe-cCCcEEEEEcC-CCCCCCCCC
Q psy16019 5 LPTMWLGSQ-------NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCAL-ADGSVAIFRRG-PDGQWDLSK 73 (121)
Q Consensus 5 ~~tvwiGt~-------~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~L-anG~l~Vy~r~-~~g~wd~~~ 73 (121)
.+.+|+|+. .+.|+.++ ....+. + ..-......|... .+.+|++- .++.|.+|+.. .+| +.+..
T Consensus 144 ~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~-~--~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G-l~~~~ 218 (326)
T 2ghs_A 144 SGALWIGTMGRKAETGAGSIYHVA-KGKVTK-L--FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG-LPTGK 218 (326)
T ss_dssp TSCEEEEEEETTCCTTCEEEEEEE-TTEEEE-E--EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC-CBSSC
T ss_pred CCCEEEEeCCCcCCCCceEEEEEe-CCcEEE-e--eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC-CcccC
Confidence 456999985 37899998 331111 1 1111234456665 33677765 46889999865 233 12233
Q ss_pred ceEE-EeCCCCCceeEeeee-CCEEEEEe--CCeEEEEeCCCCcEEEEEE
Q psy16019 74 YHTV-TLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 74 ~~~i-~lg~~~~pV~~m~~v-~~~lw~~~--gn~I~Vi~~~tl~i~~~~~ 119 (121)
.+.+ .+.........|... ++.||++. +++|+++|+ +.+..+.+.
T Consensus 219 ~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~ 267 (326)
T 2ghs_A 219 AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE 267 (326)
T ss_dssp CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE
Confidence 3333 443222334566665 57899998 578999999 566666554
No 202
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.85 E-value=0.036 Score=40.85 Aligned_cols=107 Identities=12% Similarity=0.068 Sum_probs=65.3
Q ss_pred eEEEEec---CCeEEEEECCcccceeeeeEe-cCCCEEEEEEeC--CEEEEEe-cCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 7 TMWLGSQ---NGSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 7 tvwiGt~---~g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~~--~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.++...+ ++.|++|+......+.+..+. ....+..+.... .++|++. .+|++.+|+...+|.. .....+..
T Consensus 52 ~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~--~~~~~~~~ 129 (347)
T 3hfq_A 52 CLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL--TLTDTVQH 129 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE--EEEEEEEC
T ss_pred eEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe--eecceeec
Confidence 3777776 589999998543223444432 345677777764 4689888 7799999977554421 11111222
Q ss_pred CCC-------CCceeEeeee-CCEEEEEeC--CeEEEEeCC-CCcEE
Q psy16019 80 GLP-------HHSVRSLAAV-YNKVWCGYK--NKIHVVDPK-SLDVI 115 (121)
Q Consensus 80 g~~-------~~pV~~m~~v-~~~lw~~~g--n~I~Vi~~~-tl~i~ 115 (121)
... ...+.++... ++++|++.. ++|.+++.. +.++.
T Consensus 130 ~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 130 SGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp CCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEE
T ss_pred CCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEE
Confidence 110 1236777776 244888765 689999987 55544
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.83 E-value=0.035 Score=40.06 Aligned_cols=100 Identities=3% Similarity=0.013 Sum_probs=62.0
Q ss_pred CCeEEEEe-cCCeEEEEECCcccc-eeeeeE-ecC----CCEEEEEEe-CCEEEEEe-cCCcEEEEEcCCCCCCCCCCce
Q psy16019 5 LPTMWLGS-QNGSVFVHSAVSQWR-RCLHSI-QLK----DSVLNIVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYH 75 (121)
Q Consensus 5 ~~tvwiGt-~~g~I~v~~~~~~~~-~~l~~~-~l~----~~V~~i~~~-~~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~ 75 (121)
...+|++. .++.|++|+....-+ .....+ .++ ..+..|... ++.+|++. .+|.|.+|....+ ....
T Consensus 187 g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g-----~~~~ 261 (314)
T 1pjx_A 187 PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG-----QPKM 261 (314)
T ss_dssp EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB-----SCSE
T ss_pred CCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC-----cEeE
Confidence 34788885 679999998652101 111111 233 346667765 46899987 5788999843311 1123
Q ss_pred EEEeCCCCCceeEeeee--CCEEEEEeCC--eEEEEeCCC
Q psy16019 76 TVTLGLPHHSVRSLAAV--YNKVWCGYKN--KIHVVDPKS 111 (121)
Q Consensus 76 ~i~lg~~~~pV~~m~~v--~~~lw~~~gn--~I~Vi~~~t 111 (121)
.+.+.. ..+.+++.. ++.||++..+ .|+.++..+
T Consensus 262 ~~~~~~--~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 262 RIRCPF--EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECSS--SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEeCCC--CCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 344433 567777764 3569999886 999999875
No 204
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.80 E-value=0.026 Score=46.37 Aligned_cols=113 Identities=13% Similarity=0.076 Sum_probs=71.7
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCC-----CEE-EEEEeCCEEEEEec------CCcEEEEEcCCCC-CCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKD-----SVL-NIVHVQGRVVCALA------DGSVAIFRRGPDG-QWDL 71 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~-----~V~-~i~~~~~~v~v~La------nG~l~Vy~r~~~g-~wd~ 71 (121)
.+.|++|+.+|.|+.+++.+ -+.+++.++++ .+. .-...++.||++.. +|.|..|+...+. .|..
T Consensus 115 ~~~v~v~~~dg~l~alD~~t--G~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKT--GKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTT--CCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCC--CCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 56899999999999999876 35667766543 222 11235789999997 7999999776543 3533
Q ss_pred CCceE-EEe-CCC----C------------------------CceeEeeee--CCEEEEEeCC-----------------
Q psy16019 72 SKYHT-VTL-GLP----H------------------------HSVRSLAAV--YNKVWCGYKN----------------- 102 (121)
Q Consensus 72 ~~~~~-i~l-g~~----~------------------------~pV~~m~~v--~~~lw~~~gn----------------- 102 (121)
....- ... ..| . .+-..+++. .+.++.+.+|
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 21100 000 000 0 000123332 4789998864
Q ss_pred eEEEEeCCCCcEEEEEE
Q psy16019 103 KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 103 ~I~Vi~~~tl~i~~~~~ 119 (121)
.|+.+|++|+++.-+++
T Consensus 273 ~v~Ald~~tG~~~W~~~ 289 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQ 289 (571)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred EEEEEecCCCcEEEEec
Confidence 59999999999987765
No 205
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.77 E-value=0.023 Score=46.89 Aligned_cols=106 Identities=12% Similarity=0.139 Sum_probs=70.9
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCCCE----------EEEEEeCCEEEEEecCCcEEEEEcCCCC-CCCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSV----------LNIVHVQGRVVCALADGSVAIFRRGPDG-QWDLSK 73 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V----------~~i~~~~~~v~v~LanG~l~Vy~r~~~g-~wd~~~ 73 (121)
.++|++++.++.|+.+++.+ =+.++++.++.+. ....+.+++||++..||.|..++...+. .|..
T Consensus 68 ~g~vyv~~~~~~v~AlD~~t--G~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~-- 143 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKT--GKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKK-- 143 (582)
T ss_dssp TTEEEEEETTTEEEEEESSS--CCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEE--
T ss_pred CCEEEEEcCCCCEEEEECCC--CcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeee--
Confidence 46899999967788899876 3667877665321 1234678999999999999999765543 3542
Q ss_pred ceEEEeCCC--CCcee-EeeeeCC------EEEEEe-------CCeEEEEeCCCCcEEEEE
Q psy16019 74 YHTVTLGLP--HHSVR-SLAAVYN------KVWCGY-------KNKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 74 ~~~i~lg~~--~~pV~-~m~~v~~------~lw~~~-------gn~I~Vi~~~tl~i~~~~ 118 (121)
.++.+ ...+. .-.+.++ .|++++ .+.|+.+|++|+++.=++
T Consensus 144 ----~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 144 ----KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp ----ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred ----cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 22221 01111 1123455 899987 368999999999986544
No 206
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.75 E-value=0.095 Score=38.30 Aligned_cols=109 Identities=11% Similarity=0.077 Sum_probs=63.9
Q ss_pred CCeEEEEecC-------CeEEEEECCcccceeeeeE-ecCCCEEEEEEeCC--EEEEEe-cCCcEEEEEcCCCCCCCCCC
Q psy16019 5 LPTMWLGSQN-------GSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQG--RVVCAL-ADGSVAIFRRGPDGQWDLSK 73 (121)
Q Consensus 5 ~~tvwiGt~~-------g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~~--~v~v~L-anG~l~Vy~r~~~g~wd~~~ 73 (121)
.+.+|+++.. +.|+.++.... + ...+ .-...+..|....+ .+|++. .++.|.+|+...+|.. +..
T Consensus 145 ~g~l~v~~~~~~~~~~~~~l~~~~~~~~--~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~-~~~ 220 (333)
T 2dg1_A 145 KGGFYFTDFRGYSTNPLGGVYYVSPDFR--T-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVT-IQP 220 (333)
T ss_dssp TSCEEEEECCCBTTBCCEEEEEECTTSC--C-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSS-EEE
T ss_pred CCCEEEEeccccccCCCceEEEEeCCCC--E-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcC-ccc
Confidence 4579999873 78888886541 2 1111 11234566776543 588775 4789999977543310 000
Q ss_pred c--eE-EEeCCCCCceeEeeee-CCEEEEEe--CCeEEEEeCCCCcEEEEEE
Q psy16019 74 Y--HT-VTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 74 ~--~~-i~lg~~~~pV~~m~~v-~~~lw~~~--gn~I~Vi~~~tl~i~~~~~ 119 (121)
. .. ..+.. ...+..|... ++.+|++. .+.|+++|+ +.+..+.+.
T Consensus 221 ~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~ 270 (333)
T 2dg1_A 221 FGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQIL 270 (333)
T ss_dssp EEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred ccceEEEecCC-CCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEE
Confidence 0 11 12211 1345667766 47899987 468999998 455555554
No 207
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.73 E-value=0.078 Score=36.99 Aligned_cols=108 Identities=9% Similarity=-0.105 Sum_probs=64.8
Q ss_pred CCCeEE-EEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEeCC--EEEEEe-cCCcEEEEEcCCCCCCCCCCceEEE
Q psy16019 4 VLPTMW-LGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQG--RVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVT 78 (121)
Q Consensus 4 ~~~tvw-iGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~~--~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~i~ 78 (121)
....+. .+..++.+.||.......+ ...+ ..+..+.++.+..+ .++++. .+|.+.+|....+ ......
T Consensus 139 dg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~------~~~~~~ 211 (297)
T 2ojh_A 139 DGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD------GSSVER 211 (297)
T ss_dssp TSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT------SSCEEE
T ss_pred CCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC------CCCcEE
Confidence 344454 6778897777764321122 2233 44578888888643 455555 5888888865422 222333
Q ss_pred eCCCCCceeEeeee--CCEEEEEeC------------CeEEEEeCCCCcEEEEE
Q psy16019 79 LGLPHHSVRSLAAV--YNKVWCGYK------------NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 79 lg~~~~pV~~m~~v--~~~lw~~~g------------n~I~Vi~~~tl~i~~~~ 118 (121)
+.....++.++... ++.|+++.. ..|+++|..+.+.....
T Consensus 212 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 212 ITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp CCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 43333677777665 466766554 46999999998765543
No 208
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.72 E-value=0.033 Score=46.56 Aligned_cols=112 Identities=13% Similarity=0.179 Sum_probs=73.3
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC-C-----CEE-EEEEeCCEEEEEec------CCcEEEEEcCCCC-CCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-D-----SVL-NIVHVQGRVVCALA------DGSVAIFRRGPDG-QWD 70 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~-----~V~-~i~~~~~~v~v~La------nG~l~Vy~r~~~g-~wd 70 (121)
.+.|++|+.+|.|+.+++.+ -+.+++++++ + .++ .-...++.||++.. +|.|..|+...+. .|.
T Consensus 128 ~~~v~v~~~dg~l~alD~~t--G~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAAT--GKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp TTEEEEECTTSEEEEEETTT--CCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCC--CCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 56899999999999999877 3667777765 2 111 12345889999986 6899999765443 353
Q ss_pred CCCceEE------------------------E--eCCCCCceeEeee--eCCEEEEEeCC--------------------
Q psy16019 71 LSKYHTV------------------------T--LGLPHHSVRSLAA--VYNKVWCGYKN-------------------- 102 (121)
Q Consensus 71 ~~~~~~i------------------------~--lg~~~~pV~~m~~--v~~~lw~~~gn-------------------- 102 (121)
.+...-. . -|. .....+.+ .++.|+++.++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~--~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGG--TMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEEC--CCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCc--ccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 2211000 0 000 01122333 36899999886
Q ss_pred eEEEEeCCCCcEEEEEEe
Q psy16019 103 KIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 103 ~I~Vi~~~tl~i~~~~~~ 120 (121)
.|+.+|++|+++.-+++.
T Consensus 284 sv~AlD~~TG~~~W~~~~ 301 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQE 301 (677)
T ss_dssp EEEEECTTTCCEEEEEES
T ss_pred EEEEEECCCCCEEEEEec
Confidence 399999999999877763
No 209
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.68 E-value=0.021 Score=47.59 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=73.2
Q ss_pred CCeEEEEec-CCeEEEEEC-CcccceeeeeEecCCCE------------EEEEE--eCCE----EEEEecCCcEEEEEcC
Q psy16019 5 LPTMWLGSQ-NGSVFVHSA-VSQWRRCLHSIQLKDSV------------LNIVH--VQGR----VVCALADGSVAIFRRG 64 (121)
Q Consensus 5 ~~tvwiGt~-~g~I~v~~~-~~~~~~~l~~~~l~~~V------------~~i~~--~~~~----v~v~LanG~l~Vy~r~ 64 (121)
.++|++++. ++.|+-+++ .+ -+.+++.+++... ..+.+ .+++ ||++..||.|..++..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~t--G~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDP--GTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCT--TSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCC--CcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 468999999 899999998 55 3667777654211 12345 5667 9999999999999765
Q ss_pred CCC-CCCCCCceEEEeCCC--CCcee-EeeeeCCEEEEEe-------CCeEEEEeCCCCcEEEEEE
Q psy16019 65 PDG-QWDLSKYHTVTLGLP--HHSVR-SLAAVYNKVWCGY-------KNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 65 ~~g-~wd~~~~~~i~lg~~--~~pV~-~m~~v~~~lw~~~-------gn~I~Vi~~~tl~i~~~~~ 119 (121)
.+. .|.. .++++ ...+. .-++.++.|++++ .+.|+.+|++|+++.=+++
T Consensus 140 TG~~~W~~------~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 140 TGETVWKV------ENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp TCCEEEEE------ECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCCEEEee------cCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 443 3642 22220 01221 1234689999987 3689999999999886665
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.61 E-value=0.092 Score=38.46 Aligned_cols=100 Identities=8% Similarity=0.106 Sum_probs=64.2
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-EeC--
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLG-- 80 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~lg-- 80 (121)
+...|+...++.|+.|+... .....+.++..+.+|... +++++++. ++.|.+|+... + ....+ ...
T Consensus 25 ~~l~~~d~~~~~i~~~d~~~---~~~~~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~-g-----~~~~~~~~~~~ 94 (297)
T 3g4e_A 25 NSLLFVDIPAKKVCRWDSFT---KQVQRVTMDAPVSSVALRQSGGYVATI-GTKFCALNWKE-Q-----SAVVLATVDND 94 (297)
T ss_dssp TEEEEEETTTTEEEEEETTT---CCEEEEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTT-T-----EEEEEEECCTT
T ss_pred CEEEEEECCCCEEEEEECCC---CcEEEEeCCCceEEEEECCCCCEEEEE-CCeEEEEECCC-C-----cEEEEEecCCC
Confidence 45788888999999999876 223456778889898876 45788887 55688884322 1 11222 221
Q ss_pred CCCCceeEeeee-CCEEEEEeC-------------CeEEEEeCCCCcEE
Q psy16019 81 LPHHSVRSLAAV-YNKVWCGYK-------------NKIHVVDPKSLDVI 115 (121)
Q Consensus 81 ~~~~pV~~m~~v-~~~lw~~~g-------------n~I~Vi~~~tl~i~ 115 (121)
.+...+..+... .+++|++.. ..|+.+++. +++.
T Consensus 95 ~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~ 142 (297)
T 3g4e_A 95 KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK 142 (297)
T ss_dssp CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE
T ss_pred CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE
Confidence 112335556655 477999862 379999875 3443
No 211
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.58 E-value=0.11 Score=38.37 Aligned_cols=104 Identities=9% Similarity=0.098 Sum_probs=63.4
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEec---------------------CCCEEEEEEe--CCEEEEEecCCcEEE
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL---------------------KDSVLNIVHV--QGRVVCALADGSVAI 60 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l---------------------~~~V~~i~~~--~~~v~v~LanG~l~V 60 (121)
.+..+|+++.+|.|+.|+.... + ...+.. ...+..|... ++++||+...+.|..
T Consensus 29 ~g~~l~v~~~~~~i~~~~~~~~--~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~ 105 (322)
T 2fp8_A 29 TNKGFYTSVQDGRVIKYEGPNS--G-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSV 105 (322)
T ss_dssp TCSSEEEECTTSEEEEECCTTT--C-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred CCCEEEEEcCCCeEEEECCCCC--c-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEE
Confidence 3445999999999999987652 1 222221 1357788877 589999977766777
Q ss_pred EEcCCCCCCCCCCceEEE--eC-CCCCceeEeeee--CCEEEEEeC-------------------CeEEEEeCCCCcEEE
Q psy16019 61 FRRGPDGQWDLSKYHTVT--LG-LPHHSVRSLAAV--YNKVWCGYK-------------------NKIHVVDPKSLDVIR 116 (121)
Q Consensus 61 y~r~~~g~wd~~~~~~i~--lg-~~~~pV~~m~~v--~~~lw~~~g-------------------n~I~Vi~~~tl~i~~ 116 (121)
|.... + ..+.+. .. .+......|+.. ++.||++.. ++|+.+|+.+.+++.
T Consensus 106 ~d~~~-g-----~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 106 VGSEG-G-----HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp ECTTC-E-----ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred EeCCC-C-----EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 73221 1 112221 11 111123445554 478999863 469999998887654
No 212
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.49 E-value=0.15 Score=40.26 Aligned_cols=106 Identities=8% Similarity=-0.014 Sum_probs=63.0
Q ss_pred CCCeEEEEecCCeEEEEECCcccceeeeeEec----CCCEEEEEEe-CCEEEE-------------EecCCcEEEEEcCC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL----KDSVLNIVHV-QGRVVC-------------ALADGSVAIFRRGP 65 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l----~~~V~~i~~~-~~~v~v-------------~LanG~l~Vy~r~~ 65 (121)
.+..+--|+.|+.|.||++.. .+++++++- ...|.++.+. ++..++ |..|+++.+|
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~T--Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW---- 265 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKT--GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI---- 265 (356)
T ss_dssp STTEEEEEETTSEEEEEETTT--CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE----
T ss_pred CCceEEEecCCCcEEEEECCC--CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE----
Confidence 456777789999999999987 577888752 2356655555 344443 3345566665
Q ss_pred CCCCCCCCceEE---EeCCC-C--CceeEeeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEE
Q psy16019 66 DGQWDLSKYHTV---TLGLP-H--HSVRSLAAVYNKVWCGYK-NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 66 ~g~wd~~~~~~i---~lg~~-~--~pV~~m~~v~~~lw~~~g-n~I~Vi~~~tl~i~~~~~ 119 (121)
|...-+.+ .+..| . ..+.+-...+..+..|+. +.|+|-|..+++..++|+
T Consensus 266 ----d~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 266 ----NPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLP 322 (356)
T ss_dssp ----ETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred ----ECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEec
Confidence 44444332 21111 1 112222222344555554 689999999999988874
No 213
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.44 E-value=0.036 Score=46.47 Aligned_cols=109 Identities=19% Similarity=0.281 Sum_probs=71.6
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC-C-----CEE-EEEEeCCEEEEEec------CCcEEEEEcCCCC-CCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-D-----SVL-NIVHVQGRVVCALA------DGSVAIFRRGPDG-QWD 70 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~-----~V~-~i~~~~~~v~v~La------nG~l~Vy~r~~~g-~wd 70 (121)
.+.|++|+.+|.|+.+++.+ =+.+++++.. + .+. .-...++.||++.+ +|.|..|+...+. .|.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~T--G~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKT--GQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TTEEEEECTTSEEEEEETTT--CCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEccCCEEEEEECCC--CCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 56899999999999999876 3566666553 1 111 11235889999875 6889999776544 364
Q ss_pred CCCceEEEeCCCC---------------------------CceeEeee--eCCEEEEEeCC-------------------
Q psy16019 71 LSKYHTVTLGLPH---------------------------HSVRSLAA--VYNKVWCGYKN------------------- 102 (121)
Q Consensus 71 ~~~~~~i~lg~~~---------------------------~pV~~m~~--v~~~lw~~~gn------------------- 102 (121)
..... ++|. ..-..+.. ..+.|+++.+|
T Consensus 199 ~~~~~----~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~ 274 (689)
T 1yiq_A 199 FYTVP----GDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFL 274 (689)
T ss_dssp EESSC----CCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTT
T ss_pred ecccC----CCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceee
Confidence 32100 1110 01113333 35899999887
Q ss_pred -eEEEEeCCCCcEEEEEE
Q psy16019 103 -KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 103 -~I~Vi~~~tl~i~~~~~ 119 (121)
.|+.+|++|+++.=+++
T Consensus 275 ~~v~AlD~~TG~~~W~~~ 292 (689)
T 1yiq_A 275 SSIVAVNADTGEYVWHYQ 292 (689)
T ss_dssp TEEEEEETTTCCEEEEEE
T ss_pred eeEEEEEccCCceeEeee
Confidence 39999999999987765
No 214
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.43 E-value=0.057 Score=44.90 Aligned_cols=110 Identities=14% Similarity=0.105 Sum_probs=70.5
Q ss_pred EEEEecCCeEEEEECCcccceeeeeEecCC-----CEEE-EEEeCCEEEEEec------CCcEEEEEcCCCC-CCCCCCc
Q psy16019 8 MWLGSQNGSVFVHSAVSQWRRCLHSIQLKD-----SVLN-IVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKY 74 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~~~~l~~~~l~~-----~V~~-i~~~~~~v~v~La------nG~l~Vy~r~~~g-~wd~~~~ 74 (121)
|++|+.+|.|+.+++.+ =+.+++.++++ .+++ -...++.||++.+ +|.|..|+...+. .|..+..
T Consensus 124 V~v~t~dg~l~AlDa~T--G~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAET--GETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTT--CCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCC--CCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 99999999999999876 35667666543 2221 1235789999985 8999999776543 3533221
Q ss_pred eE-E--EeCC---CCCce------------------------eEeee--eCCEEEEEeCC-----------------eEE
Q psy16019 75 HT-V--TLGL---PHHSV------------------------RSLAA--VYNKVWCGYKN-----------------KIH 105 (121)
Q Consensus 75 ~~-i--~lg~---~~~pV------------------------~~m~~--v~~~lw~~~gn-----------------~I~ 105 (121)
.- . .++. ...|+ ..+++ ..+.|+++.+| .|+
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 10 0 0000 00011 12233 46899999886 799
Q ss_pred EEeCCCCcEEEEEE
Q psy16019 106 VVDPKSLDVIRPVT 119 (121)
Q Consensus 106 Vi~~~tl~i~~~~~ 119 (121)
.+|++|+++.=+++
T Consensus 282 Ald~~TG~~~W~~q 295 (599)
T 1w6s_A 282 GRDADTGEAKFGYQ 295 (599)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEeCCCCceeeEee
Confidence 99999999987665
No 215
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.42 E-value=0.096 Score=38.74 Aligned_cols=99 Identities=8% Similarity=0.034 Sum_probs=59.7
Q ss_pred CCCCeEEEE-ecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEe-CCEEEEEecC-----------CcEEEEEcCCCCC
Q psy16019 3 SVLPTMWLG-SQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHV-QGRVVCALAD-----------GSVAIFRRGPDGQ 68 (121)
Q Consensus 3 ~~~~tvwiG-t~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~-~~~v~v~Lan-----------G~l~Vy~r~~~g~ 68 (121)
.....+|+. +.+++|++|+...........+ .++. ...|... ++.+||+... |.|.+|.. +|
T Consensus 194 ~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~--~G- 269 (322)
T 2fp8_A 194 ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE--FG- 269 (322)
T ss_dssp TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT--TS-
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC--CC-
Confidence 345679988 5678999999775211111111 3444 5556654 4579999865 56777732 22
Q ss_pred CCCCCceEEEeCCC----CCceeEeeeeCCEEEEEeC--CeEEEEeCC
Q psy16019 69 WDLSKYHTVTLGLP----HHSVRSLAAVYNKVWCGYK--NKIHVVDPK 110 (121)
Q Consensus 69 wd~~~~~~i~lg~~----~~pV~~m~~v~~~lw~~~g--n~I~Vi~~~ 110 (121)
..+-.+..| ...+.++...+++||++.. +.|.++++.
T Consensus 270 -----~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 270 -----NILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp -----CEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred -----CEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 122223322 1345566667899999954 789999875
No 216
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.37 E-value=0.24 Score=38.27 Aligned_cols=90 Identities=9% Similarity=-0.026 Sum_probs=59.3
Q ss_pred CeEEEEECCcccceeeeeE-ecCCCEEEEEEeCC--EEEEEecCC---cEEEEEcCCCCCCCCCCceEEEeCCCCCceeE
Q psy16019 15 GSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQG--RVVCALADG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRS 88 (121)
Q Consensus 15 g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~~--~v~v~LanG---~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~ 88 (121)
+.|++++... ++...+ ..++.|.++.+..+ +++.+..++ .|.+| |++..+...+.....++.+
T Consensus 159 ~~i~i~d~~g---~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~--------d~~tg~~~~l~~~~~~~~~ 227 (415)
T 2hqs_A 159 YELRVSDYDG---YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQ--------TLANGAVRQVASFPRHNGA 227 (415)
T ss_dssp EEEEEEETTS---CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEE--------ETTTCCEEEEECCSSCEEE
T ss_pred ceEEEEcCCC---CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEE--------ECCCCcEEEeecCCCcccC
Confidence 7999999875 333444 45678999998743 455555553 77776 4444444444333367888
Q ss_pred eeee--CCEEEEEeC----CeEEEEeCCCCcEE
Q psy16019 89 LAAV--YNKVWCGYK----NKIHVVDPKSLDVI 115 (121)
Q Consensus 89 m~~v--~~~lw~~~g----n~I~Vi~~~tl~i~ 115 (121)
+... ++.|.++.. ..|+++|..+.+..
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~ 260 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR 260 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCEE
Confidence 8877 466775442 46999999998764
No 217
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.33 E-value=0.055 Score=44.16 Aligned_cols=107 Identities=11% Similarity=0.044 Sum_probs=66.6
Q ss_pred CCCCCeEEEEec-CC-----eEEEEECCcccceeeeeEecC-------------------------CCEEEEEEeCC--E
Q psy16019 2 TSVLPTMWLGSQ-NG-----SVFVHSAVSQWRRCLHSIQLK-------------------------DSVLNIVHVQG--R 48 (121)
Q Consensus 2 ~~~~~tvwiGt~-~g-----~I~v~~~~~~~~~~l~~~~l~-------------------------~~V~~i~~~~~--~ 48 (121)
+.....+..++. +| .|++++.... +....+..+ ..|.++.+..+ +
T Consensus 45 SpdG~~la~~~~~d~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~ 122 (741)
T 2ecf_A 45 APDGSRVTFLRGKDSDRNQLDLWSYDIGSG--QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR 122 (741)
T ss_dssp CTTSSEEEEEECCSSCTTEEEEEEEETTTC--CEEEEECGGGTC--------------------CCEESCCCEECTTSSE
T ss_pred ecCCCEEEEEeccCCCCcccEEEEEECCCC--ceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE
Confidence 345667888887 88 8999998773 322222221 12566666533 3
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEeeee--CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16019 49 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLDVIR 116 (121)
Q Consensus 49 v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~tl~i~~ 116 (121)
++++. +|+|.+|+..... .+....+.....+++++... ++.|.++..++|+++|..+.+..+
T Consensus 123 l~~~~-~~~i~~~d~~~~~-----~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 123 LLFPL-GGELYLYDLKQEG-----KAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp EEEEE-TTEEEEEESSSCS-----TTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE
T ss_pred EEEEe-CCcEEEEECCCCC-----cceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE
Confidence 44443 4889888654321 00222232223678877766 577888888999999999987654
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.31 E-value=0.06 Score=39.54 Aligned_cols=97 Identities=9% Similarity=0.085 Sum_probs=54.6
Q ss_pred CCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecC------CcEEEEEcCCCCCCCCCCceEE-EeCCCCC
Q psy16019 14 NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTV-TLGLPHH 84 (121)
Q Consensus 14 ~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~Lan------G~l~Vy~r~~~g~wd~~~~~~i-~lg~~~~ 84 (121)
.+.|+.|+..+..-+.+. .+ .....|... +..+|++-.+ +.|.+|....++ +.+.+.+ .... .
T Consensus 168 ~~~v~~~d~~~g~~~~~~--~~-~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~---l~~~~~~~~~~~--~ 239 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA--DL-DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA---LHDRRHFASVPD--G 239 (305)
T ss_dssp CEEEEEECSSSCCCEEEE--EE-SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE---EEEEEEEECCSS--S
T ss_pred CCeEEEEcCCCCcEEEEe--cC-CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC---ccCCeEEEECCC--C
Confidence 367888887542111111 22 233445555 3369998776 689998665433 2222222 1111 1
Q ss_pred ceeEeeee-CCEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16019 85 SVRSLAAV-YNKVWCGYKNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 85 pV~~m~~v-~~~lw~~~gn~I~Vi~~~tl~i~~~~~ 119 (121)
-...|... ++.||++.++.|+++|++ ++....+.
T Consensus 240 ~pdgi~~d~~G~lwv~~~~gv~~~~~~-g~~~~~~~ 274 (305)
T 3dr2_A 240 LPDGFCVDRGGWLWSSSGTGVCVFDSD-GQLLGHIP 274 (305)
T ss_dssp CCCSEEECTTSCEEECCSSEEEEECTT-SCEEEEEE
T ss_pred CCCeEEECCCCCEEEecCCcEEEECCC-CCEEEEEE
Confidence 22345554 467999999999999994 55555554
No 219
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.30 E-value=0.21 Score=36.94 Aligned_cols=106 Identities=12% Similarity=0.104 Sum_probs=64.1
Q ss_pred CCCCeEEEEecC----CeEEEEECCcc--cceeeeeEecC-CCEEEEEEeCCEEEEEe-cCCcEEEEEcCCCCCCCCCCc
Q psy16019 3 SVLPTMWLGSQN----GSVFVHSAVSQ--WRRCLHSIQLK-DSVLNIVHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKY 74 (121)
Q Consensus 3 ~~~~tvwiGt~~----g~I~v~~~~~~--~~~~l~~~~l~-~~V~~i~~~~~~v~v~L-anG~l~Vy~r~~~g~wd~~~~ 74 (121)
.....++.+.++ |.|.+|+.... .-+.+..+... ..+..+...++++|++. .+|++.+|+...++.. ...
T Consensus 59 pdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~--~~~ 136 (361)
T 3scy_A 59 ADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGAL--LPA 136 (361)
T ss_dssp TTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCB--CSC
T ss_pred CCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcC--ccc
Confidence 445678888885 89999886542 11334444433 45666666666788887 5789999988765532 222
Q ss_pred -eEEEe-CCCC-------CceeEeeee--CCEEEEEeC--CeEEEEeCC
Q psy16019 75 -HTVTL-GLPH-------HSVRSLAAV--YNKVWCGYK--NKIHVVDPK 110 (121)
Q Consensus 75 -~~i~l-g~~~-------~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~ 110 (121)
..+.. +..+ ..+.++... ++.|++++. +.|.+++..
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~ 185 (361)
T 3scy_A 137 SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNIN 185 (361)
T ss_dssp SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEc
Confidence 22222 2111 123566665 467888774 678887554
No 220
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.27 E-value=0.065 Score=44.69 Aligned_cols=110 Identities=19% Similarity=0.307 Sum_probs=72.0
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCC-----CEE-EEEEeCCEEEEEec------CCcEEEEEcCCCC-CCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKD-----SVL-NIVHVQGRVVCALA------DGSVAIFRRGPDG-QWDL 71 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~-----~V~-~i~~~~~~v~v~La------nG~l~Vy~r~~~g-~wd~ 71 (121)
.+.|++|+.+|.|+.+++.+ -+.++++++.+ .+. .-...++.||++.. +|.|..|+...+. .|..
T Consensus 117 ~~~v~v~~~dg~l~alD~~t--G~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKT--GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTT--CCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCC--CCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 56899999999999999877 36677766531 111 11235889999986 4889999776543 3643
Q ss_pred CCceEEEeCCCC---------------------------CceeEeee--eCCEEEEEeCCe-------------------
Q psy16019 72 SKYHTVTLGLPH---------------------------HSVRSLAA--VYNKVWCGYKNK------------------- 103 (121)
Q Consensus 72 ~~~~~i~lg~~~---------------------------~pV~~m~~--v~~~lw~~~gn~------------------- 103 (121)
+... ++|. .....+++ ..+.+|++.+|.
T Consensus 195 ~~~~----~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 195 YTVP----GDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp ESSC----CCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred cccC----CCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 2110 1110 01112333 358899998863
Q ss_pred -EEEEeCCCCcEEEEEEe
Q psy16019 104 -IHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 104 -I~Vi~~~tl~i~~~~~~ 120 (121)
|+.+|++|+++.=+++.
T Consensus 271 ~v~AlD~~tG~~~W~~~~ 288 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQV 288 (668)
T ss_dssp EEEEECTTTCCEEEEEES
T ss_pred eEEEEcCCCCceeeEeec
Confidence 99999999999877653
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.20 E-value=0.058 Score=44.05 Aligned_cols=101 Identities=12% Similarity=0.167 Sum_probs=67.9
Q ss_pred CCeEEEEECCcccceeeeeEecC---CCEEEEEE--e--CCEEEEEec------CCcEEEEEcCCCCCCCCCCceEEEeC
Q psy16019 14 NGSVFVHSAVSQWRRCLHSIQLK---DSVLNIVH--V--QGRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLG 80 (121)
Q Consensus 14 ~g~I~v~~~~~~~~~~l~~~~l~---~~V~~i~~--~--~~~v~v~La------nG~l~Vy~r~~~g~wd~~~~~~i~lg 80 (121)
..+|++|+..+ ++.+++++++ .....|.. + ..++||+.+ +++|.+|..+. |.|. ..++|.+.
T Consensus 227 ~d~V~v~D~~~--~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~--~~~vIdi~ 301 (462)
T 2ece_A 227 GNRIHFWDLRK--RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWN--AEKVIEIP 301 (462)
T ss_dssp CCEEEEEETTT--TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEE--EEEEEEEC
T ss_pred CCEEEEEECCC--CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-Ccee--EEEEEeCC
Confidence 68999999987 5778889886 35556655 3 458999986 57999998875 6664 33344443
Q ss_pred C-------C---------CCceeEeeee--CCEEEEEeC--CeEEEEeCC---CCcEEEEEE
Q psy16019 81 L-------P---------HHSVRSLAAV--YNKVWCGYK--NKIHVVDPK---SLDVIRPVT 119 (121)
Q Consensus 81 ~-------~---------~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~---tl~i~~~~~ 119 (121)
. | ..-..-|.+. ++.||+++. |.|.++|.. ++++..++.
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEE
Confidence 3 0 0112233333 689999999 799999864 456665554
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.07 E-value=0.034 Score=43.55 Aligned_cols=64 Identities=14% Similarity=-0.024 Sum_probs=50.6
Q ss_pred eCCEEEEEecCC-----cEEEEEcCCCCCCCCCCceE---EEeCCCCCceeEeeee--CCEEEEEe-----------CCe
Q psy16019 45 VQGRVVCALADG-----SVAIFRRGPDGQWDLSKYHT---VTLGLPHHSVRSLAAV--YNKVWCGY-----------KNK 103 (121)
Q Consensus 45 ~~~~v~v~LanG-----~l~Vy~r~~~g~wd~~~~~~---i~lg~~~~pV~~m~~v--~~~lw~~~-----------gn~ 103 (121)
...++||.-..+ +|.|+ |.+..++ |.+|. .| -+.+. ++++|.++ +|.
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvI--------D~~t~~v~~~i~vG~--~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~ 97 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVS--------CAGCGVTLGHSLGAF--LS--LAVAGHSGSDFALASTSFARSAKGKRTDY 97 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEE--------ETTTTEEEEEEEECT--TC--EEEECTTSSCEEEEEEEETTTTSSSEEEE
T ss_pred CCCeEEEECCccCCccceEEEE--------ECCCCeEEEEEeCCC--CC--ceEECCCCCEEEEEcccccccccCCCCCE
Confidence 446899988754 78888 6666655 68887 78 45555 68999998 478
Q ss_pred EEEEeCCCCcEEEEEEe
Q psy16019 104 IHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 104 I~Vi~~~tl~i~~~~~~ 120 (121)
|.+||+.|+++.+++++
T Consensus 98 VsviD~~T~~vv~~I~v 114 (368)
T 1mda_H 98 VEVFDPVTFLPIADIEL 114 (368)
T ss_dssp EEEECTTTCCEEEEEEE
T ss_pred EEEEECCCCCEEEEEEC
Confidence 99999999999999875
No 223
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.94 E-value=0.17 Score=38.76 Aligned_cols=99 Identities=13% Similarity=0.167 Sum_probs=58.2
Q ss_pred CCeEEEEecCCeEEEEECCc---ccceeeeeEecC-CCEEEEEEe---CCEEEEEecCC----cEEEEEcCCCCCCCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVS---QWRRCLHSIQLK-DSVLNIVHV---QGRVVCALADG----SVAIFRRGPDGQWDLSK 73 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~---~~~~~l~~~~l~-~~V~~i~~~---~~~v~v~LanG----~l~Vy~r~~~g~wd~~~ 73 (121)
+..||+||+.| +++++..+ .|+.. . ..+. ..|.+|... ++.+|+|...| -|.. ..+.+..|..-.
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~-~-~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~-s~D~G~tW~~~~ 97 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELR-G-PVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFR-SDDGGGNWTEAT 97 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEE-E-EESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEE-ESSTTSCCEECS
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceEC-C-ccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEE-eCCCCCCceECC
Confidence 45899999977 77777543 33321 1 1233 578899886 57899999887 3433 233444675322
Q ss_pred ceEEEeCC--------CCCceeEeeee----CCEEEEEeC-CeEEEEe
Q psy16019 74 YHTVTLGL--------PHHSVRSLAAV----YNKVWCGYK-NKIHVVD 108 (121)
Q Consensus 74 ~~~i~lg~--------~~~pV~~m~~v----~~~lw~~~g-n~I~Vi~ 108 (121)
.. ..+.. ....|.+|+.. .+.||++.. +.|+.-+
T Consensus 98 ~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~ 144 (394)
T 3b7f_A 98 RP-PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST 144 (394)
T ss_dssp BC-CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES
T ss_pred cc-ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc
Confidence 11 00111 01246677765 688999754 6777664
No 224
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.70 E-value=0.23 Score=39.18 Aligned_cols=91 Identities=18% Similarity=0.103 Sum_probs=56.6
Q ss_pred EEEecCCeEEEEECCcccceeeeeE--ecC----CCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEE-EeC-
Q psy16019 9 WLGSQNGSVFVHSAVSQWRRCLHSI--QLK----DSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLG- 80 (121)
Q Consensus 9 wiGt~~g~I~v~~~~~~~~~~l~~~--~l~----~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~lg- 80 (121)
--|+.|+.|.+|+... .+++..+ .+| +.+++.......+..|..||+|.+| |+...+.+ ++.
T Consensus 254 aSGs~D~tIklWd~~t--gk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIW--------Dl~tGk~l~tL~g 323 (356)
T 2w18_A 254 SLRSPVFQLIVINPKT--TLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIW--------DLLLGQCTALLPP 323 (356)
T ss_dssp ----CCEEEEEEETTT--TEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEE--------ETTTCSEEEEECC
T ss_pred eccCCCcEEEEEECCC--CEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEE--------ECCCCcEEEEecC
Confidence 3478899999999876 3544433 234 2355666666667777889999997 77766554 443
Q ss_pred CCCCceeEeeee--CCEEEEEeC-CeEEEEeC
Q psy16019 81 LPHHSVRSLAAV--YNKVWCGYK-NKIHVVDP 109 (121)
Q Consensus 81 ~~~~pV~~m~~v--~~~lw~~~g-n~I~Vi~~ 109 (121)
....++.+++.. ++.|..|+. ++|+|-|.
T Consensus 324 H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 324 VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 222355555555 467887877 57998763
No 225
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.67 E-value=0.11 Score=42.17 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=48.7
Q ss_pred CCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEeeee--CCEEEEEeCCeEEEEeCCC---
Q psy16019 37 DSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKS--- 111 (121)
Q Consensus 37 ~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~t--- 111 (121)
.+|.++.+..+.-++...||++.+| |++..+...+.....++.++... ++.|..+..+.|+++|..+
T Consensus 82 ~~v~~~~~spd~~~~~~~~~~i~~~--------d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFTQGGLVGF--------DMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTTTEEEEEETTEEEEE--------ETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTS
T ss_pred cCceeEEECCCCeEEEEECCEEEEE--------ECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccc
Confidence 3688888876554445578999998 44444444333323556665555 6788888889999999988
Q ss_pred --CcEEE
Q psy16019 112 --LDVIR 116 (121)
Q Consensus 112 --l~i~~ 116 (121)
.+..+
T Consensus 154 ~~g~~~~ 160 (706)
T 2z3z_A 154 GMSRAIA 160 (706)
T ss_dssp CCCCCEE
T ss_pred cCCCcEE
Confidence 66543
No 226
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.65 E-value=0.017 Score=47.72 Aligned_cols=52 Identities=17% Similarity=0.227 Sum_probs=42.9
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEE--EEE-eCCEEEEEecCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLN--IVH-VQGRVVCALADG 56 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~--i~~-~~~~v~v~LanG 56 (121)
+..+.|++|+.||.|+.|++.+ -+.++++++++.+.. +.| .+++.||+.++|
T Consensus 495 tagglvf~g~~dg~l~A~D~~t--G~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 495 TAGNLVFTGTGDGYFKAFDAKS--GKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp ETTTEEEEECTTSEEEEEETTT--CCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred eCCCEEEEECCCCcEEEEECCC--CCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 4578999999999999999887 588999999975543 555 688999998877
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.84 E-value=0.067 Score=39.27 Aligned_cols=52 Identities=17% Similarity=0.099 Sum_probs=39.1
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecCCcEEE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALADGSVAI 60 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~LanG~l~V 60 (121)
.+.+|+++.+ .|++|+... +.+..+.+|..+.++.+. .+.+|++.++|...+
T Consensus 249 ~G~lwv~~~~-gv~~~~~~g---~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 249 GGWLWSSSGT-GVCVFDSDG---QLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp TSCEEECCSS-EEEEECTTS---CEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CCCEEEecCC-cEEEECCCC---CEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 4469999965 599999854 567788888778888874 458999998765444
No 228
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=94.84 E-value=0.36 Score=36.17 Aligned_cols=106 Identities=11% Similarity=0.024 Sum_probs=60.0
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEec--CCCEEEEEEe-CCE---EEEEe-------------cCCcEEEEEc
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL--KDSVLNIVHV-QGR---VVCAL-------------ADGSVAIFRR 63 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l--~~~V~~i~~~-~~~---v~v~L-------------anG~l~Vy~r 63 (121)
.....++.+.++ .|.+|+.... .+....... +..+.++... +++ +|++- .+|++.+|+.
T Consensus 49 pdg~~l~~~~~~-~v~~~~~~~~-g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~ 126 (365)
T 1jof_A 49 HERKNIYGAAMK-KWSSFAVKSP-TEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSV 126 (365)
T ss_dssp TTSSEEEEEEBT-EEEEEEEEET-TEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEE
T ss_pred CCCCEEEEEccc-eEEEEEECCC-CCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEcc
Confidence 345578888887 8999987521 122222222 2323233333 233 34442 5788999977
Q ss_pred CCCCCCCCCCceEEEe---CCCCCceeEeeee--CCEEEEEeC--CeEEEEeCC-CCcEE
Q psy16019 64 GPDGQWDLSKYHTVTL---GLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK-SLDVI 115 (121)
Q Consensus 64 ~~~g~wd~~~~~~i~l---g~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~-tl~i~ 115 (121)
..+|.. ...+.. .. ...+.++... ++.|+++.. ++|++++.+ +++++
T Consensus 127 ~~~g~~----~~~~~~~~~~~-~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 127 SETGKL----EKNVQNYEYQE-NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp CTTCCE----EEEEEEEECCT-TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred CCCCcC----cceEeeEEeCC-CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 654421 112222 11 2456777766 467888764 689999988 77664
No 229
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=94.83 E-value=0.13 Score=41.64 Aligned_cols=100 Identities=12% Similarity=0.078 Sum_probs=60.7
Q ss_pred EEEEecCCeEEEEECCcccceeeeeEecCC----CEEEEEEeCC--EEEEEecC---------CcEEEEEcCCCCCCCCC
Q psy16019 8 MWLGSQNGSVFVHSAVSQWRRCLHSIQLKD----SVLNIVHVQG--RVVCALAD---------GSVAIFRRGPDGQWDLS 72 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~~~~l~~~~l~~----~V~~i~~~~~--~v~v~Lan---------G~l~Vy~r~~~g~wd~~ 72 (121)
+...+.+|.|++|+.... ++...+..+. .|.++....+ ++..+..+ +.+.+| |++
T Consensus 30 ~~~~~~dg~i~~~d~~~g--~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~--------d~~ 99 (723)
T 1xfd_A 30 FIYREQKGTVRLWNVETN--TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS--------KIP 99 (723)
T ss_dssp BCCCCSSSCEEEBCGGGC--CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE--------ESS
T ss_pred EEEEeCCCCEEEEECCCC--cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE--------ECC
Confidence 334468899999998763 3334444332 3777777643 44444443 555565 444
Q ss_pred CceEEEeCCC---CCceeEeeee--CCEEEEEeCCeEEEEeCCCCcEEEE
Q psy16019 73 KYHTVTLGLP---HHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLDVIRP 117 (121)
Q Consensus 73 ~~~~i~lg~~---~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~tl~i~~~ 117 (121)
..+...+... ...++++... ++.|..+..++|+++|..+.+..+.
T Consensus 100 ~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 100 HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRV 149 (723)
T ss_dssp SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEE
T ss_pred CCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEE
Confidence 4333333321 1225665555 6788888889999999999876654
No 230
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=94.78 E-value=0.16 Score=41.42 Aligned_cols=96 Identities=13% Similarity=0.044 Sum_probs=60.8
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEecCC----CEEEEEEeC--CEEEEEec---------CCcEEEEEcCCCCCCCC
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQLKD----SVLNIVHVQ--GRVVCALA---------DGSVAIFRRGPDGQWDL 71 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~----~V~~i~~~~--~~v~v~La---------nG~l~Vy~r~~~g~wd~ 71 (121)
.++..+.+|.|++|+.... ++...+..+. .|.++.+.. .++..+.. +|+|.+++ +
T Consensus 28 ~~~~~~~d~~i~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d--------~ 97 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETG--QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD--------L 97 (719)
T ss_dssp EEEEECTTSCEEEEESSSC--CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE--------T
T ss_pred eEEEEcCCCCEEEEEcCCC--cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE--------C
Confidence 5666678999999998773 3333333322 377777763 34544444 57777774 4
Q ss_pred CCceE---EEeCCCCCceeEeeee--CCEEEEEeCCeEEEEeCCCCcEE
Q psy16019 72 SKYHT---VTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLDVI 115 (121)
Q Consensus 72 ~~~~~---i~lg~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~tl~i~ 115 (121)
+..+. ..+. .++.++... ++.|..+..++|++.|..+++..
T Consensus 98 ~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 98 SNGEFVRGNELP---RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPF 143 (719)
T ss_dssp TTTEECCSSCCC---SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCE
T ss_pred CCCccccceecC---cccccceECCCCCEEEEEECCeEEEEeCCCCCcE
Confidence 43333 2232 345555544 67898888899999999887754
No 231
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.68 E-value=0.92 Score=33.48 Aligned_cols=104 Identities=10% Similarity=0.088 Sum_probs=63.2
Q ss_pred CCeEEEEe--cCCeEEEEECCcccceeeeeEecC-----------CCEEEEEEeC--CEEEEEe-cCCcEEEEEcCCCCC
Q psy16019 5 LPTMWLGS--QNGSVFVHSAVSQWRRCLHSIQLK-----------DSVLNIVHVQ--GRVVCAL-ADGSVAIFRRGPDGQ 68 (121)
Q Consensus 5 ~~tvwiGt--~~g~I~v~~~~~~~~~~l~~~~l~-----------~~V~~i~~~~--~~v~v~L-anG~l~Vy~r~~~g~ 68 (121)
.+.+|+.. .+++|.+|+... +.+..+..+ ..+..|.... +++||+- .++.|.+|+... |
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g---~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G- 228 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSG---KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-K- 228 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTS---CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-C-
T ss_pred CCeEEEEeCCCCCeEEEEcCCC---CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-C-
Confidence 56677766 488999998544 333333211 1367778763 6899886 467899996542 1
Q ss_pred CCCCCceEEEeCC--CCCceeEeeeeCCEEEEEeC---------CeEEEEeCCCCcEEEEE
Q psy16019 69 WDLSKYHTVTLGL--PHHSVRSLAAVYNKVWCGYK---------NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 69 wd~~~~~~i~lg~--~~~pV~~m~~v~~~lw~~~g---------n~I~Vi~~~tl~i~~~~ 118 (121)
..+-.+.. ....+..+....+.++...| ++|+++|..++++...|
T Consensus 229 -----~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 229 -----EFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp -----CEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred -----cEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 11112321 12345555555444444443 38999999999988876
No 232
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.57 E-value=0.36 Score=39.15 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=35.5
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC-CEEEEEecCCcEEEEEcCC
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ-GRVVCALADGSVAIFRRGP 65 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~-~~v~v~LanG~l~Vy~r~~ 65 (121)
..+..+ .++.|++|+... .+.......+..+.++.+.. ++-++...|++|.+++...
T Consensus 93 ~~~~~~-~~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~ 150 (706)
T 2z3z_A 93 GLVVLF-TQGGLVGFDMLA--RKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGK 150 (706)
T ss_dssp TEEEEE-ETTEEEEEETTT--TEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBC
T ss_pred CeEEEE-ECCEEEEEECCC--CceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCc
Confidence 444444 459999999876 33333333456677777763 3333345889999986543
No 233
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.57 E-value=1.3 Score=34.82 Aligned_cols=111 Identities=12% Similarity=0.146 Sum_probs=80.1
Q ss_pred eEEEEecCCeEEEEECCcc-----cceeeeeEecCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 7 TMWLGSQNGSVFVHSAVSQ-----WRRCLHSIQLKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~-----~~~~l~~~~l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.+++..++|.+..|.+.+. ..+.+.+|+++..+--+...+ +++|+|-.|--|..|.-..++ + ...+.+ .
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~--~-~~~~~v~~ 221 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDG--G-SNGTVIDR 221 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTS--C-SCCEEEEE
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCC--C-CCceEEEE
Confidence 5888888999998887542 235678999999888888864 799999999778777644333 1 233444 4
Q ss_pred eCCC--CCceeEeeee-C----CEEEEEeC--CeEEEEeCC-CCcEEEEEEe
Q psy16019 79 LGLP--HHSVRSLAAV-Y----NKVWCGYK--NKIHVVDPK-SLDVIRPVTI 120 (121)
Q Consensus 79 lg~~--~~pV~~m~~v-~----~~lw~~~g--n~I~Vi~~~-tl~i~~~~~~ 120 (121)
++.. ..-+.-|++. . +-|.++|+ |...|+|.+ +++...+|.+
T Consensus 222 ~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 222 ADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp BSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred ecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 4322 2356777775 2 36999995 699999997 8999999975
No 234
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.30 E-value=0.76 Score=37.33 Aligned_cols=60 Identities=5% Similarity=0.067 Sum_probs=37.5
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEeC-CEEEEEecCCcEEEEEc
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQ-GRVVCALADGSVAIFRR 63 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~-~~v~v~LanG~l~Vy~r 63 (121)
.....+..+++ +.|++|+.....+.....+ ..+..+.++.+.. ++.++..++++|.+++.
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~ 179 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDL 179 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEET
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEec
Confidence 44556777776 9999999877300023333 3446788888874 34444445778888743
No 235
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.12 E-value=1.3 Score=39.71 Aligned_cols=77 Identities=27% Similarity=0.273 Sum_probs=52.7
Q ss_pred CCeEEEEec-CCeEEEEECCcccceeeeeEecCC--CEEEEEE--eC--CEEEEEecCCcEEEEEcCC-CCCCCCCCceE
Q psy16019 5 LPTMWLGSQ-NGSVFVHSAVSQWRRCLHSIQLKD--SVLNIVH--VQ--GRVVCALADGSVAIFRRGP-DGQWDLSKYHT 76 (121)
Q Consensus 5 ~~tvwiGt~-~g~I~v~~~~~~~~~~l~~~~l~~--~V~~i~~--~~--~~v~v~LanG~l~Vy~r~~-~g~wd~~~~~~ 76 (121)
.+.+.+|+. |+.+.||++.+ -+.+....|++ .+.+|.. .+ .++++||.||.+.-|.-+. .| .+.+.+.
T Consensus 571 s~~~aVg~~~d~tv~I~sL~~--l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg--~l~d~r~ 646 (1158)
T 3ei3_A 571 SPLCAIGLWTDISARILKLPS--FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETG--LLSDRKK 646 (1158)
T ss_dssp CSEEEEEETTTTEEEEEETTT--CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTC--CEEEEEE
T ss_pred ccEEEEEECCCCEEEEEECCC--CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCC--cccccee
Confidence 357889995 99999999976 34444445643 4444433 23 3799999999999997543 23 3455566
Q ss_pred EEeCCCCCcee
Q psy16019 77 VTLGLPHHSVR 87 (121)
Q Consensus 77 i~lg~~~~pV~ 87 (121)
..+|. .|++
T Consensus 647 ~~LG~--~pv~ 655 (1158)
T 3ei3_A 647 VTLGT--QPTV 655 (1158)
T ss_dssp EECCS--SCCE
T ss_pred EEcCC--CceE
Confidence 78887 6765
No 236
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.00 E-value=1.2 Score=34.48 Aligned_cols=102 Identities=9% Similarity=0.114 Sum_probs=61.4
Q ss_pred CCCeEEEEecCC--eEEEEECCcccce-eeeeE-e-cCCCEEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCCCceE
Q psy16019 4 VLPTMWLGSQNG--SVFVHSAVSQWRR-CLHSI-Q-LKDSVLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 4 ~~~tvwiGt~~g--~I~v~~~~~~~~~-~l~~~-~-l~~~V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
....+|.+..++ .|++++..+.... .+..+ . ....+.++... ++.+|++..+|.|..|..... ...+
T Consensus 181 ~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~------~~~~ 254 (409)
T 3hrp_A 181 DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ------EVTL 254 (409)
T ss_dssp TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC------CEEE
T ss_pred CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC------CEEE
Confidence 345678887766 8999997764331 12111 1 12345566665 479999988898888854321 1122
Q ss_pred E----EeCCC-CCceeEeeee--CCEEEEEeC--CeEEEEeCCC
Q psy16019 77 V----TLGLP-HHSVRSLAAV--YNKVWCGYK--NKIHVVDPKS 111 (121)
Q Consensus 77 i----~lg~~-~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~t 111 (121)
+ ..+.. ..|...|++. ++.||++.. ++|+.++...
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 2 11211 1243367766 589999876 6899998764
No 237
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=93.46 E-value=1.4 Score=37.85 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=62.8
Q ss_pred CeEEEEecCCeEE-EEECCcccceeeeeE-ecCCCEEEEEEeC--CEEEEEecCCcEEEEEcCCCCCCCCCCceEEEeC-
Q psy16019 6 PTMWLGSQNGSVF-VHSAVSQWRRCLHSI-QLKDSVLNIVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG- 80 (121)
Q Consensus 6 ~tvwiGt~~g~I~-v~~~~~~~~~~l~~~-~l~~~V~~i~~~~--~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg- 80 (121)
..+..+++++.|+ +|+.... + ...+ .....+.++.+.. .+++.+..++.|.+| |++..+...+-
T Consensus 349 ~~l~~~s~~~~l~~~~d~~~~--~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~--------d~~tg~~~~~~~ 417 (1045)
T 1k32_A 349 VAFIHGTREGDFLGIYDYRTG--K-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTV--------DLETGKPTVIER 417 (1045)
T ss_dssp EEEEEEETTEEEEEEEETTTC--C-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEE--------ETTTCCEEEEEE
T ss_pred CeEEEEECCCceEEEEECCCC--C-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEE--------ECCCCceEEecc
Confidence 3566677788899 9997762 2 2222 3336788888864 467778888889887 44443333221
Q ss_pred CCCCceeEeeee--CCEEEEEeC-----------CeEEEEeCCCCcE
Q psy16019 81 LPHHSVRSLAAV--YNKVWCGYK-----------NKIHVVDPKSLDV 114 (121)
Q Consensus 81 ~~~~pV~~m~~v--~~~lw~~~g-----------n~I~Vi~~~tl~i 114 (121)
....++.++... ++.|..+.. +.|+++|..+.++
T Consensus 418 ~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 418 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 123677777766 455654433 3899999998874
No 238
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.44 E-value=0.51 Score=36.02 Aligned_cols=103 Identities=13% Similarity=0.136 Sum_probs=59.8
Q ss_pred CCeEEEEecCCeEEEEEC-CcccceeeeeEecC----------------CCEEEEEEe---CCEEEEEecCCcEEEEEcC
Q psy16019 5 LPTMWLGSQNGSVFVHSA-VSQWRRCLHSIQLK----------------DSVLNIVHV---QGRVVCALADGSVAIFRRG 64 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~-~~~~~~~l~~~~l~----------------~~V~~i~~~---~~~v~v~LanG~l~Vy~r~ 64 (121)
.+.+|+|++.|.|+...- ...|++.......| ..+.+|... ++.+|+|..+|-|... .+
T Consensus 128 ~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s-~D 206 (394)
T 3b7f_A 128 PGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES-TD 206 (394)
T ss_dssp TTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE-SS
T ss_pred CCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE-CC
Confidence 678999999998887642 23344321100111 357788875 4689999888764443 23
Q ss_pred CCCCCCCCCceEEEeCCC------CCceeEeeeeC---CEEEEEeCCeEEEEe
Q psy16019 65 PDGQWDLSKYHTVTLGLP------HHSVRSLAAVY---NKVWCGYKNKIHVVD 108 (121)
Q Consensus 65 ~~g~wd~~~~~~i~lg~~------~~pV~~m~~v~---~~lw~~~gn~I~Vi~ 108 (121)
.+..|..-....-.-..| ...+++|.... +.||++..+.|+..+
T Consensus 207 gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~ 259 (394)
T 3b7f_A 207 AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMD 259 (394)
T ss_dssp TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEE
T ss_pred CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeC
Confidence 334574221100000001 13478887763 899999998888765
No 239
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.33 E-value=0.77 Score=41.06 Aligned_cols=90 Identities=16% Similarity=0.245 Sum_probs=63.9
Q ss_pred CeEEEEECCcccceeeeeEecC--CCEEEEEEe------CCEEEEEe----------cCCcEEEEEcCCCCCCCCCCceE
Q psy16019 15 GSVFVHSAVSQWRRCLHSIQLK--DSVLNIVHV------QGRVVCAL----------ADGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 15 g~I~v~~~~~~~~~~l~~~~l~--~~V~~i~~~------~~~v~v~L----------anG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
++|.+++..+ -+.+.++.+. ..++|++.. +.++.||. ..|.|.||+-. + ...+.
T Consensus 807 s~i~lidp~t--~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~-~-----~kL~l 878 (1158)
T 3ei3_A 807 HNLLIIDQHT--FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS-D-----GKLQT 878 (1158)
T ss_dssp EEEEEEETTT--CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE-T-----TEEEE
T ss_pred EEEEEEeCCC--CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE-C-----CEEEE
Confidence 5678888665 3567888887 488888864 35788888 35889999654 1 12222
Q ss_pred EEeCCCCCceeEeeeeCCEEEEEeCCeEEEEeCCCC
Q psy16019 77 VTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSL 112 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v~~~lw~~~gn~I~Vi~~~tl 112 (121)
+.--....||++|...+++|-+|.|++|++++...-
T Consensus 879 v~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~ 914 (1158)
T 3ei3_A 879 VAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE 914 (1158)
T ss_dssp EEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTT
T ss_pred EEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCC
Confidence 211112479999999999999999999999988643
No 240
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=92.87 E-value=1 Score=37.22 Aligned_cols=48 Identities=21% Similarity=0.134 Sum_probs=33.7
Q ss_pred CCCCCceEEEeCCCCCceeEeeee--CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16019 69 WDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLDVIR 116 (121)
Q Consensus 69 wd~~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~tl~i~~ 116 (121)
||++.-+..++...+..+...... ++.|..+..+.|++.|..+.+..+
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR 146 (740)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred EECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence 466666665554433566666555 688988888999999998877543
No 241
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=91.78 E-value=3.1 Score=30.93 Aligned_cols=113 Identities=8% Similarity=0.059 Sum_probs=66.6
Q ss_pred CCCCeEEEEe-cCCeEEEEECC-cccceeeeeEecC---CCEEEEEEeC--CEEEEEec-CCcEEEEEcCC-CCCCCCCC
Q psy16019 3 SVLPTMWLGS-QNGSVFVHSAV-SQWRRCLHSIQLK---DSVLNIVHVQ--GRVVCALA-DGSVAIFRRGP-DGQWDLSK 73 (121)
Q Consensus 3 ~~~~tvwiGt-~~g~I~v~~~~-~~~~~~l~~~~l~---~~V~~i~~~~--~~v~v~La-nG~l~Vy~r~~-~g~wd~~~ 73 (121)
.....++++. .++.|++|+.. +...+.+..+++| ..+..+.+.. .++|++.. ++++.+|+.+. .|.... .
T Consensus 154 pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~-~ 232 (365)
T 1jof_A 154 PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY-T 232 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-E
T ss_pred CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE-c
Confidence 4455677765 46899999986 3211233455543 4677888764 37888875 68999997643 231100 0
Q ss_pred ceEEEeCCC---C-C-------ceeEee-ee--CCEEEEEeC--C-----eEEEEeCC-CCcEEE
Q psy16019 74 YHTVTLGLP---H-H-------SVRSLA-AV--YNKVWCGYK--N-----KIHVVDPK-SLDVIR 116 (121)
Q Consensus 74 ~~~i~lg~~---~-~-------pV~~m~-~v--~~~lw~~~g--n-----~I~Vi~~~-tl~i~~ 116 (121)
...+..-.. . . .+..+. .. ++.||+++. + .|.+++.. ++++.+
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred cceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 112222110 0 1 366677 55 578998875 4 79999875 677654
No 242
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=91.52 E-value=0.8 Score=37.22 Aligned_cols=60 Identities=7% Similarity=0.119 Sum_probs=37.7
Q ss_pred CCCCCeEEEEec---------CCeEEEEECCcccceeeeeEecCCCEEEEEEeCC-EEEEEecCCcEEEEEc
Q psy16019 2 TSVLPTMWLGSQ---------NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQG-RVVCALADGSVAIFRR 63 (121)
Q Consensus 2 ~~~~~tvwiGt~---------~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~-~v~v~LanG~l~Vy~r 63 (121)
+.....+..+++ ++.|+++++.. .+.+...+++..+.++.+..+ +-++...|++|.+++.
T Consensus 68 SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~--g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 68 SPDRQFVYLESDYSKLWRYSYTATYYIYDLSN--GEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESS
T ss_pred CCCCCeEEEEecCceeEEeecceEEEEEECCC--CccccceecCcccccceECCCCCEEEEEECCeEEEEeC
Confidence 345566777766 78999999877 333222345566777777642 3333336888888743
No 243
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=91.00 E-value=3.7 Score=30.42 Aligned_cols=74 Identities=18% Similarity=0.150 Sum_probs=50.2
Q ss_pred CCEEEEEEe-CCEEEEEec---CC--cEEEEEcCCCCCCCCCCceEEEeCC-------CCCceeEeeeeC-CEEEEEe--
Q psy16019 37 DSVLNIVHV-QGRVVCALA---DG--SVAIFRRGPDGQWDLSKYHTVTLGL-------PHHSVRSLAAVY-NKVWCGY-- 100 (121)
Q Consensus 37 ~~V~~i~~~-~~~v~v~La---nG--~l~Vy~r~~~g~wd~~~~~~i~lg~-------~~~pV~~m~~v~-~~lw~~~-- 100 (121)
..+..|... ++++||+.. +| +|..+. +| ++..+.+ .-..+..|.+.. ++||+..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~---~g-------~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT---QD-------GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE---TT-------EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECH
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC---CC-------CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCC
Confidence 567777876 679999964 35 677774 22 2222211 124566777764 8899865
Q ss_pred -----CCeEEEEeCCCCcEEEEEEe
Q psy16019 101 -----KNKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 101 -----gn~I~Vi~~~tl~i~~~~~~ 120 (121)
+++|+++|+.|.++.+.++.
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~ 111 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYL 111 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEEC
T ss_pred CCcCCCCeEEEEECCCCeEEEEEEC
Confidence 47999999999998887753
No 244
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=90.70 E-value=5.3 Score=34.34 Aligned_cols=90 Identities=2% Similarity=-0.076 Sum_probs=55.8
Q ss_pred CCCCCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEeCC--EEEEEecC----------CcEEEEEcCCCCC
Q psy16019 2 TSVLPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQG--RVVCALAD----------GSVAIFRRGPDGQ 68 (121)
Q Consensus 2 ~~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~~--~v~v~Lan----------G~l~Vy~r~~~g~ 68 (121)
+.....+..+.+++.|++|++.. .+....+ ..+..|.++.+..+ ++..+..+ +.|.+|
T Consensus 387 SpDG~~la~~~~~~~v~~~d~~t--g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~------- 457 (1045)
T 1k32_A 387 DRNGKFAVVANDRFEIMTVDLET--GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY------- 457 (1045)
T ss_dssp CTTSSEEEEEETTSEEEEEETTT--CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE-------
T ss_pred CCCCCEEEEECCCCeEEEEECCC--CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEE-------
Confidence 34566788999999999999876 3433333 34467777777643 34444433 367776
Q ss_pred CCCCCceEEEeCCCCCceeEeeee--CCEEEEEeC
Q psy16019 69 WDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK 101 (121)
Q Consensus 69 wd~~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~g 101 (121)
|++..+...+......+.++... ++.|+.++.
T Consensus 458 -d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 458 -DMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp -ETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred -ECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 55555555555444556666555 466766654
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=90.61 E-value=4.5 Score=32.89 Aligned_cols=109 Identities=11% Similarity=0.195 Sum_probs=60.8
Q ss_pred CCCeEEEEe-cCCeEEEEECCcccc--eeeeeEe---c----C-CCEEEEEEeCCEEEE-EecC------CcEEEEEcCC
Q psy16019 4 VLPTMWLGS-QNGSVFVHSAVSQWR--RCLHSIQ---L----K-DSVLNIVHVQGRVVC-ALAD------GSVAIFRRGP 65 (121)
Q Consensus 4 ~~~tvwiGt-~~g~I~v~~~~~~~~--~~l~~~~---l----~-~~V~~i~~~~~~v~v-~Lan------G~l~Vy~r~~ 65 (121)
....+|+.. .+++|||++....-+ +..+++. + . ....-+....+.+|| +++| |.|.++
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vl---- 169 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILML---- 169 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEE----
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEE----
Confidence 356788855 688999999864323 2344441 1 1 122223333333555 3444 678888
Q ss_pred CCCCCCCCceEE---EeCCCCCceeE-e--eeeCCEEEEEe--------------------CCeEEEEeCCCCcEEEEEE
Q psy16019 66 DGQWDLSKYHTV---TLGLPHHSVRS-L--AAVYNKVWCGY--------------------KNKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 66 ~g~wd~~~~~~i---~lg~~~~pV~~-m--~~v~~~lw~~~--------------------gn~I~Vi~~~tl~i~~~~~ 119 (121)
|.+..+++ ..+..+..+.- + .+-.+.++.+. +++|.++|..+.++.+++.
T Consensus 170 ----D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 170 ----DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp ----CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred ----ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 44444443 22221111110 1 22245566554 7999999999999888887
Q ss_pred e
Q psy16019 120 I 120 (121)
Q Consensus 120 ~ 120 (121)
+
T Consensus 246 v 246 (462)
T 2ece_A 246 L 246 (462)
T ss_dssp S
T ss_pred c
Confidence 5
No 246
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.54 E-value=0.5 Score=36.77 Aligned_cols=68 Identities=10% Similarity=0.133 Sum_probs=45.2
Q ss_pred CCEEEEEecCCcEEEEEcCCCC-CCCCCCc---eEEEeCCCCCceeEeeeeCCEEEEE--eC-CeEEEEeCCCCcEEEEE
Q psy16019 46 QGRVVCALADGSVAIFRRGPDG-QWDLSKY---HTVTLGLPHHSVRSLAAVYNKVWCG--YK-NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 46 ~~~v~v~LanG~l~Vy~r~~~g-~wd~~~~---~~i~lg~~~~pV~~m~~v~~~lw~~--~g-n~I~Vi~~~tl~i~~~~ 118 (121)
++.|||+..||.|..+.+..+. .|.++.. ..+....+..+ .++.+|++ .+ .+++.++++++..+-.+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~------~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRL------ETYETLIIEPFGDGNIYYFNAHQGLQKLPL 83 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTT------TSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccc------cCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence 4689999999999999886543 4876543 12222221111 35678876 34 68999999998666554
Q ss_pred E
Q psy16019 119 T 119 (121)
Q Consensus 119 ~ 119 (121)
.
T Consensus 84 ~ 84 (339)
T 2be1_A 84 S 84 (339)
T ss_dssp E
T ss_pred c
Confidence 4
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=90.52 E-value=0.44 Score=40.00 Aligned_cols=86 Identities=19% Similarity=0.226 Sum_probs=56.9
Q ss_pred EEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCc--e----------
Q psy16019 8 MWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKY--H---------- 75 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~--~---------- 75 (121)
.|-|.++|.+.||.+.+ .+.++.+. ||.+.....|.+.+- +
T Consensus 18 f~s~g~~g~~~v~g~ps--~r~~~~i~-------------------------vf~~~~~~g~g~~~es~~~l~~~~~~~~ 70 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPS--MRELMRVP-------------------------VFNRCSATGWGQTNESVRIHERTMSERT 70 (595)
T ss_dssp EECCBTTCEEEEEEETT--CCEEEEEE-------------------------SSSCCTTTCTTTBHHHHHHHHTTCCHHH
T ss_pred EeeCCcCceEEEEecCC--cceEEEee-------------------------eecCCCCcccCCchhHHHHHhccCCccc
Confidence 57888999999999888 45566543 344444333433221 1
Q ss_pred ----------EEEeCCCCCceeEe---eeeCCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 76 ----------TVTLGLPHHSVRSL---AAVYNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 76 ----------~i~lg~~~~pV~~m---~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
.+..|+.++|..+. ..-++.||+... ++|.+||+.++++.+.+++
T Consensus 71 ~~~~~~~g~~~~~~gd~hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~i 130 (595)
T 1fwx_A 71 KKFLAANGKRIHDNGDLHHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEI 130 (595)
T ss_dssp HHHHHHTTCSSCCCCCBCCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred hhhhhccCceecccCCCCccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeC
Confidence 24456655554444 235789999887 5799999999998886554
No 248
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.36 E-value=5.1 Score=30.93 Aligned_cols=104 Identities=9% Similarity=-0.055 Sum_probs=60.8
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC----CCEE-EEEEe--CCEEEEEec-CCcEEEEEcCCCCCCCCCCceE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK----DSVL-NIVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~----~~V~-~i~~~--~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
.+.+|+...++.|+.|+............... .... .|.+. ++++|++-. ++.|..|..+ | ...
T Consensus 230 ~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~--g------~~~ 301 (409)
T 3hrp_A 230 EEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD--G------ECE 301 (409)
T ss_dssp SSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT--C------CEE
T ss_pred CCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC--C------CEE
Confidence 56889977888999999776321111111111 1123 77776 478999865 5677777322 2 111
Q ss_pred EEeCCC--------------CCceeEeeee-CCEEEEEeC---CeEEEEeCCCCcEEE
Q psy16019 77 VTLGLP--------------HHSVRSLAAV-YNKVWCGYK---NKIHVVDPKSLDVIR 116 (121)
Q Consensus 77 i~lg~~--------------~~pV~~m~~v-~~~lw~~~g---n~I~Vi~~~tl~i~~ 116 (121)
...|.. -.--+.|++. ++.||++.. ++|+.++..++++..
T Consensus 302 ~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 302 WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 222221 0113556666 366999865 689999977877654
No 249
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=89.24 E-value=5.4 Score=29.63 Aligned_cols=98 Identities=9% Similarity=0.068 Sum_probs=55.8
Q ss_pred CCCeEEEEecCCeEEEEECC--cccceeeeeEe-cC--CCEEEEEEe-CCEEEEEecCCcEEEEEcCCCCCCCCCCceEE
Q psy16019 4 VLPTMWLGSQNGSVFVHSAV--SQWRRCLHSIQ-LK--DSVLNIVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~--~~~~~~l~~~~-l~--~~V~~i~~~-~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i 77 (121)
..+.+|+++++|.+++.+.. ..|.+ +. .. ++ ..+.+|.+. ++.+|++..+|.|. .+++.+..|.. +
T Consensus 214 ~~g~~~~~~~~G~~~~s~~D~G~tW~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~DgG~tW~~-----~ 285 (327)
T 2xbg_A 214 PDGRLWMIVNGGKIAFSDPDNSENWGE-LL-SPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQDGGQTWQQ-----D 285 (327)
T ss_dssp TTSCEEEEETTTEEEEEETTEEEEECC-CB-CTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EESSTTSSCEE-----C
T ss_pred CCCCEEEEeCCceEEEecCCCCCeeEe-cc-CCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeCCCCcccEE-----c
Confidence 34689999999987765422 12222 11 11 22 358888876 56889988899873 33444456752 2
Q ss_pred EeCCC-CCceeEeeee-CCEEEEEeC-CeEEEEeC
Q psy16019 78 TLGLP-HHSVRSLAAV-YNKVWCGYK-NKIHVVDP 109 (121)
Q Consensus 78 ~lg~~-~~pV~~m~~v-~~~lw~~~g-n~I~Vi~~ 109 (121)
..+.+ +..+.++... ++.+|++.. ..|+-.+.
T Consensus 286 ~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 286 VDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp GGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 21111 2345666654 566666544 46766654
No 250
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.08 E-value=7.1 Score=30.78 Aligned_cols=97 Identities=13% Similarity=-0.007 Sum_probs=53.6
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecC----CcEEEEEcCCCCCCCCCCceEEEeC
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALAD----GSVAIFRRGPDGQWDLSKYHTVTLG 80 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~Lan----G~l~Vy~r~~~g~wd~~~~~~i~lg 80 (121)
.+++...++.+.+|+.... +...-...+. .++.+. +..++.+..+ ++|.++ |++.-+...+.
T Consensus 124 ~~~~s~~~~~~~l~d~~~g--~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~--------d~~~g~~~~l~ 191 (582)
T 3o4h_A 124 VVFTGATEDRVALYALDGG--GLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTS--------NLSSGGLRVFD 191 (582)
T ss_dssp EEEEEECSSCEEEEEEETT--EEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEE--------ETTTCCCEEEC
T ss_pred EEEEecCCCCceEEEccCC--cEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEE--------cCCCCCceEee
Confidence 4555555666668876552 2222223343 344443 4444444444 444444 44333333443
Q ss_pred CCCCceeEeeee--CCEEEEEeC-C--eEEEEeCCCCcEE
Q psy16019 81 LPHHSVRSLAAV--YNKVWCGYK-N--KIHVVDPKSLDVI 115 (121)
Q Consensus 81 ~~~~pV~~m~~v--~~~lw~~~g-n--~I~Vi~~~tl~i~ 115 (121)
.....++..... ++.|+.+.. + +|+++|.++.+..
T Consensus 192 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 192 SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 333567777666 577886555 3 7999999998876
No 251
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=88.79 E-value=7.8 Score=30.89 Aligned_cols=102 Identities=7% Similarity=-0.038 Sum_probs=55.6
Q ss_pred CeEEEEecCC--eEEEEECCcccceeeeeEecCCC---------EEEEEEe--CCEEEEEecCCcEEEEEcCCCCCCCCC
Q psy16019 6 PTMWLGSQNG--SVFVHSAVSQWRRCLHSIQLKDS---------VLNIVHV--QGRVVCALADGSVAIFRRGPDGQWDLS 72 (121)
Q Consensus 6 ~tvwiGt~~g--~I~v~~~~~~~~~~l~~~~l~~~---------V~~i~~~--~~~v~v~LanG~l~Vy~r~~~g~wd~~ 72 (121)
..++.+..+| .|++++..+. +.......+.. +.++... +..+|.+.. |...+|..+. +
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~------~ 324 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDP------E 324 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEET------T
T ss_pred eEEEEECCCCCeEEEEEECCCC--ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEEC------C
Confidence 3556666667 6777775431 21111111111 3345554 334555555 7777775432 2
Q ss_pred CceEEEeCCCCCceeEe-eeeCCEEEEEeC--C---eEEEEeCCCCcEEE
Q psy16019 73 KYHTVTLGLPHHSVRSL-AAVYNKVWCGYK--N---KIHVVDPKSLDVIR 116 (121)
Q Consensus 73 ~~~~i~lg~~~~pV~~m-~~v~~~lw~~~g--n---~I~Vi~~~tl~i~~ 116 (121)
..+.-.+..+...+..+ ...++.+++.++ + .|+.+|..+.+..+
T Consensus 325 ~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 325 SGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp TTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred CCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 22233343334677777 777887766544 2 79999998887654
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=87.08 E-value=7 Score=28.38 Aligned_cols=82 Identities=12% Similarity=0.113 Sum_probs=51.6
Q ss_pred eeeeeEecCCCEEEEEEe-CCEEEEEe-cCCcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEeeee-CCEEEEEeC--C
Q psy16019 28 RCLHSIQLKDSVLNIVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--N 102 (121)
Q Consensus 28 ~~l~~~~l~~~V~~i~~~-~~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m~~v-~~~lw~~~g--n 102 (121)
+.+.++..+.....+... ++++|++- .+|.|..|... +. ....+..+ .....|++. +++||++.. +
T Consensus 23 ~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~--g~----~~~~~~~~---~~p~gia~~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 23 KIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPD--GN----QQIHATVE---GKVSGLAFTSNGDLVATGWNAD 93 (306)
T ss_dssp EEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--CC----EEEEEECS---SEEEEEEECTTSCEEEEEECTT
T ss_pred eEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCC--Cc----eEEEEeCC---CCceeEEEcCCCcEEEEeccCC
Confidence 455666555666777774 55788886 77888887432 21 11123333 345567665 467999873 3
Q ss_pred --eEEEEeCCCCcEEEEE
Q psy16019 103 --KIHVVDPKSLDVIRPV 118 (121)
Q Consensus 103 --~I~Vi~~~tl~i~~~~ 118 (121)
+|+.+|..+.+++...
T Consensus 94 ~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 94 SIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp SCEEEEEECTTSCEEEEE
T ss_pred cceEEEEcCCCCeEEEEE
Confidence 4999998898876543
No 253
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=85.99 E-value=2.8 Score=35.11 Aligned_cols=107 Identities=15% Similarity=0.095 Sum_probs=58.5
Q ss_pred CCeEEEEe-c-CCeEEEEECCcccceeee--eEecCCCEEEEEEeCCEEEEEecC-CcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 5 LPTMWLGS-Q-NGSVFVHSAVSQWRRCLH--SIQLKDSVLNIVHVQGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 5 ~~tvwiGt-~-~g~I~v~~~~~~~~~~l~--~~~l~~~V~~i~~~~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.+.||... . .+.|++++.....++.+. .+..|..+ .+-+..+++|++-+. +.|.+|... | ...+++ .
T Consensus 507 ~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGl-avd~~~~~LY~aD~~~~~I~~~d~d--G----~~~~~~~~ 579 (699)
T 1n7d_A 507 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI-TLDLLSGRLYWVDSKLHSISSIDVN--G----GNRKTILE 579 (699)
T ss_dssp SSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCE-EECTTTCCEEEEETTTTEEEEECSS--S----SCCEEECC
T ss_pred CCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEE-EEeccCCEEEEEecCCCeEEEEccC--C----CceEEEEe
Confidence 34555443 2 267887776553333221 23334332 222346789988754 568887432 2 122222 1
Q ss_pred eC-CCCCceeEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEE
Q psy16019 79 LG-LPHHSVRSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg-~~~~pV~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~ 119 (121)
.. .-..|. .|++.++.||.+.. ++|.++|..+++..+.+.
T Consensus 580 ~~~~~~~P~-glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 580 DEKRLAHPF-SLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CSSSCSSCC-CCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred cCCcCCCce-EeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 11 112443 56667777765554 689999999988776653
No 254
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=85.82 E-value=5.1 Score=31.44 Aligned_cols=62 Identities=11% Similarity=0.242 Sum_probs=43.2
Q ss_pred CCCCeEEEEecCCeEEEEECCccc---ceeeeeEecC---CCEEEEEE--eC---CEEEEEe-cCCcEEEEEcC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQW---RRCLHSIQLK---DSVLNIVH--VQ---GRVVCAL-ADGSVAIFRRG 64 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~---~~~l~~~~l~---~~V~~i~~--~~---~~v~v~L-anG~l~Vy~r~ 64 (121)
....+||+|.|+-.|+.|++.... .+.+..+..+ +-+--|.. .. +++||+. .|.+++||+|.
T Consensus 189 d~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 189 DEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 356799999999999999976321 2344444333 44555543 32 4799999 67899999885
No 255
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.82 E-value=7.8 Score=27.73 Aligned_cols=92 Identities=12% Similarity=0.054 Sum_probs=49.0
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEecC------CcEEEEEcCCCCCCCCCCceEEEeCCCCCc--
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS-- 85 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~Lan------G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~p-- 85 (121)
..+++|+.... |+ .+..+..|-.-.+....++++|+-.+. ..+.+|+. +..+-..+...+.|
T Consensus 175 ~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~--------~~~~W~~~~~~p~~r~ 245 (301)
T 2vpj_A 175 NSVEKYDPHTGHWT-NVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNI--------RTDSWTTVTSMTTPRC 245 (301)
T ss_dssp CCEEEEETTTTEEE-EECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET--------TTTEEEEECCCSSCCB
T ss_pred ceEEEEeCCCCcEE-eCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeC--------CCCcEEECCCCCCccc
Confidence 35667775542 22 222222222222344557777776542 35777743 33322334332222
Q ss_pred eeEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 86 VRSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 86 V~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
-.++...+++|++--| +.|.++|+++.+-+
T Consensus 246 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 246 YVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred ceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 2245566889988655 57899999886654
No 256
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=85.74 E-value=10 Score=29.12 Aligned_cols=98 Identities=14% Similarity=0.031 Sum_probs=55.1
Q ss_pred CCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec-CCcEEEEEcCCCCCCCCCCceEEEeC-C-CCCceeE
Q psy16019 14 NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLG-L-PHHSVRS 88 (121)
Q Consensus 14 ~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~i~lg-~-~~~pV~~ 88 (121)
.+.|+.++.....++.+..-.+ .....|... .+++|++-+ ++.|.+|..+ | ...+++.-+ . -..|. .
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~l-~~P~glavd~~~~~lY~aD~~~~~I~~~d~d--G----~~~~~~~~~~~~l~~P~-g 295 (400)
T 3p5b_L 224 PAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLHSISSIDVN--G----GNRKTILEDEKRLAHPF-S 295 (400)
T ss_dssp SCCEEEEETTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETT--S----CCCEEEEECSSTTSSEE-E
T ss_pred CCEEEEEeCCCCccEEEEECCC-CceEEEEEEeCCCEEEEEECCCCEEEEEeCC--C----CccEEEEeCCCCCCCCE-E
Confidence 3567777765532222211011 123344544 789999965 4667777532 2 233333222 1 13565 6
Q ss_pred eeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEE
Q psy16019 89 LAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 89 m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~ 119 (121)
|++-++.||.+.. ++|..+|..+++..+.+.
T Consensus 296 l~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 296 LAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 7777887755544 689999988887666553
No 257
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=85.71 E-value=9.3 Score=28.52 Aligned_cols=105 Identities=11% Similarity=0.039 Sum_probs=60.3
Q ss_pred CCeEEEEe--cCCeEEEEECCcccceeee--eEecCCCEEEEEEe--CCEEEEEecC-CcEEEEEcCCCCCCCCCCceEE
Q psy16019 5 LPTMWLGS--QNGSVFVHSAVSQWRRCLH--SIQLKDSVLNIVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 5 ~~tvwiGt--~~g~I~v~~~~~~~~~~l~--~~~l~~~V~~i~~~--~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.+.||... +.+.|+.++.....++.+. .+..| ..|... ++++|++-+. +.|..|..+ | ...+++
T Consensus 133 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~P---nglavd~~~~~lY~aD~~~~~I~~~d~d--G----~~~~~~ 203 (318)
T 3sov_A 133 SGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP---NGLTLDYEEQKLYWADAKLNFIHKSNLD--G----TNRQAV 203 (318)
T ss_dssp GTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEETTTTEEEEEETT--S----CSCEEE
T ss_pred CCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCc---cEEEEeccCCEEEEEECCCCEEEEEcCC--C----CceEEE
Confidence 34555554 3578888887653333221 12223 344544 6899998764 667777432 2 233333
Q ss_pred EeCCCCCceeEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEE
Q psy16019 78 TLGLPHHSVRSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~ 119 (121)
--+.-..|- .|++-++.+|.+.. ++|..+|..+++..+.+.
T Consensus 204 ~~~~~~~P~-glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 204 VKGSLPHPF-ALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp ECSCCSCEE-EEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred ecCCCCCce-EEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 222223453 56667777755554 689999998887666554
No 258
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=85.44 E-value=2.6 Score=33.96 Aligned_cols=61 Identities=5% Similarity=-0.042 Sum_probs=31.9
Q ss_pred CCCCCeEEEEecC---------CeEEEEECCcccceeeeeEe-cCCCEEEEEEe-CCEEEEEecCCcEEEEE
Q psy16019 2 TSVLPTMWLGSQN---------GSVFVHSAVSQWRRCLHSIQ-LKDSVLNIVHV-QGRVVCALADGSVAIFR 62 (121)
Q Consensus 2 ~~~~~tvwiGt~~---------g~I~v~~~~~~~~~~l~~~~-l~~~V~~i~~~-~~~v~v~LanG~l~Vy~ 62 (121)
+.....|..++++ +.|++|+......+.+.... ....+.++.+. +++-++..++++|.+++
T Consensus 69 SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~ 140 (723)
T 1xfd_A 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCA 140 (723)
T ss_dssp CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEES
T ss_pred CCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEE
Confidence 3445566667653 78899998763211121111 11125555555 33344444567777763
No 259
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.83 E-value=7.8 Score=33.30 Aligned_cols=81 Identities=9% Similarity=0.032 Sum_probs=58.3
Q ss_pred CEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCceE---------EEeCC-----CCCceeEeeeeCCEEEEEeC-C
Q psy16019 38 SVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHT---------VTLGL-----PHHSVRSLAAVYNKVWCGYK-N 102 (121)
Q Consensus 38 ~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~~~---------i~lg~-----~~~pV~~m~~v~~~lw~~~g-n 102 (121)
|-...+..++.++|+|.||-|.-++|..++.|+.-.+.- + ++. +..-|.|+..-++.||.=|. +
T Consensus 163 Ph~L~avs~~~liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~SL~~l-f~~~~~~~~~~~Is~~~~~~~fLftL~~Dh 241 (729)
T 3f7f_A 163 PHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKCLTRF-FSRSSKSDYDSVISCKLFHERYLIVLTQNC 241 (729)
T ss_dssp EEEEEECSSSBEEEEETTSCEECCEESSSSCEECCCCCCCGGGGGGSTT-CCTTCSSCCCCEEEEEEETTTEEEEEETTC
T ss_pred CcEEEEECCCeEEEEEcCCCEEEEEeccCCCcceeeecCCchhhhhHHh-hcCCCCCCcCceEEEeccCCcEEEEEEcCC
Confidence 555566668899999999999999998776553211100 1 111 12357777777889999999 5
Q ss_pred eEEEEeCCCCcEEEEEE
Q psy16019 103 KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 103 ~I~Vi~~~tl~i~~~~~ 119 (121)
++++=|.+|+++..+..
T Consensus 242 ~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 242 HLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred eEEEEEcCCCceEEeec
Confidence 89999999999877654
No 260
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=83.72 E-value=5.2 Score=32.52 Aligned_cols=62 Identities=10% Similarity=0.128 Sum_probs=39.3
Q ss_pred EEEEEecCCcEEEEEcCCCCCCCC---CCceEEEeCCCCCceeEeeee--CCEEEEEeCCeEEEEeC
Q psy16019 48 RVVCALADGSVAIFRRGPDGQWDL---SKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDP 109 (121)
Q Consensus 48 ~v~v~LanG~l~Vy~r~~~g~wd~---~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~ 109 (121)
-+|+|..+|.|.=......+.++. .-...+.+..++.||+.|.+. .+.|+++.+.+|.=+..
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~vpv 489 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLPL 489 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEEES
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEEEH
Confidence 499999999975444433333311 112235665445899999887 48899999998876644
No 261
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=83.21 E-value=11 Score=27.14 Aligned_cols=92 Identities=14% Similarity=0.143 Sum_probs=48.9
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEecC------CcEEEEEcCCCCCCCCCCceEEEeCCCCCce-
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV- 86 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~Lan------G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV- 86 (121)
..+++|+.... |+ .+..+..+-.-.+....++++|+-.+. ..+.+|+... +.|. .++..+.|-
T Consensus 169 ~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~r~ 239 (306)
T 3ii7_A 169 NSCEVYDPATETWT-ELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKL-NEWK-------MVSPMPWKGV 239 (306)
T ss_dssp CCEEEEETTTTEEE-EECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTT-TEEE-------ECCCCSCCBS
T ss_pred ceEEEeCCCCCeEE-ECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCC-CcEE-------ECCCCCCCcc
Confidence 44677776553 22 222222222222344457788876542 3567774332 2243 333321221
Q ss_pred -eEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 87 -RSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 87 -~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
.++...+++|++--| +.+.++|+++.+-+
T Consensus 240 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 240 TVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp CCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred ceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 245556889888655 68999999886544
No 262
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=82.46 E-value=11 Score=26.56 Aligned_cols=103 Identities=12% Similarity=0.049 Sum_probs=61.0
Q ss_pred CCeEEEEe-cCCeEEEEECCcccceeeeeEecC-CCEEEEEEe--CCEEEEEecC---CcEEEEEcCCCCCCCCCCceEE
Q psy16019 5 LPTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHV--QGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 5 ~~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~--~~~v~v~Lan---G~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.+.+|+.. .+++|++++......+.+ +... .....|... ++++|++-.. +.|.++..+ | ...+.+
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d--g----~~~~~~ 161 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD--G----TNRRIL 161 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT--S----CCCEEE
T ss_pred CCeEEEEECCCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC--C----CCcEEE
Confidence 45566554 467888888765322222 1112 345677776 5799999864 678777542 2 122333
Q ss_pred EeCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcEEE
Q psy16019 78 TLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDVIR 116 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i~~ 116 (121)
.-.....| +.|++. ++.||++.. ++|.++|..+...+.
T Consensus 162 ~~~~~~~P-~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 162 AQDNLGLP-NGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK 203 (267)
T ss_dssp ECTTCSCE-EEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE
T ss_pred EECCCCCC-cEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE
Confidence 21111223 456665 579988887 689999998765443
No 263
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=82.28 E-value=19 Score=29.30 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=59.7
Q ss_pred CeEEEEecC-CeEEEEECCcccceeeeeE-ecC----CCEEEEEE-------e--CCEEEEEecCC-------cEEEEEc
Q psy16019 6 PTMWLGSQN-GSVFVHSAVSQWRRCLHSI-QLK----DSVLNIVH-------V--QGRVVCALADG-------SVAIFRR 63 (121)
Q Consensus 6 ~tvwiGt~~-g~I~v~~~~~~~~~~l~~~-~l~----~~V~~i~~-------~--~~~v~v~LanG-------~l~Vy~r 63 (121)
+.||+.-.. +.|.+++..+ +.+.++ ... .....|.. . .+.+|++.-++ .+.++.|
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~---~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r 228 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKN---RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKR 228 (496)
T ss_dssp EEEEEEEETEEEEEEEETTT---TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEEC
T ss_pred CEEEEEECCCCeEEEEECCC---CEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEec
Confidence 456665543 5566677665 223332 222 24677777 3 44699998876 2888888
Q ss_pred CCCCCCCC-CCceEEEeCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCC
Q psy16019 64 GPDGQWDL-SKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK 110 (121)
Q Consensus 64 ~~~g~wd~-~~~~~i~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~ 110 (121)
..+|.|.- .....+.-.. .|. .+++. ++.||++.. ++|+.+|++
T Consensus 229 ~~~G~~~~~~~~~~v~~~~--~p~-giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 229 NADGTFDDRSDIQLIAAYK--QCN-GATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CTTSCCSTTSCEEEEEEES--CCC-CEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCCceeecccceeeccCC--Cce-EEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 88787742 1124443333 343 33444 588998776 579999987
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.92 E-value=14 Score=27.69 Aligned_cols=107 Identities=12% Similarity=-0.005 Sum_probs=60.0
Q ss_pred CCeEEEE-ecC-CeEEEEECCcccceeeeeEecCCCEEEEEE--eCCEEEEEecC-CcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 5 LPTMWLG-SQN-GSVFVHSAVSQWRRCLHSIQLKDSVLNIVH--VQGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 5 ~~tvwiG-t~~-g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~--~~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.+.||.. ..+ +.|+.++.....++.+..-.+ .....|.. .++++|++-+. +.|..|..+ | ...+.+--
T Consensus 170 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~-~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d--G----~~~~~~~~ 242 (349)
T 3v64_C 170 EGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAKHHVIERANLD--G----SHRKAVIS 242 (349)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEESCCSSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETT--S----CSCEEEEC
T ss_pred cCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC-CCcceEEEeCCCCEEEEEECCCCEEEEEeCC--C----CceEEEEe
Confidence 3444443 334 778888766533332211011 12334455 47899999765 567777532 2 12233211
Q ss_pred CCCCCceeEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEE
Q psy16019 80 GLPHHSVRSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 80 g~~~~pV~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~ 119 (121)
.....| ..|++.++.||.+.. ++|..+|..+++..+.+.
T Consensus 243 ~~~~~P-~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 243 QGLPHP-FAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp SSCSSE-EEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCCc-eEEEEECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 112345 366778889888775 689999987777665553
No 265
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=81.73 E-value=10 Score=31.67 Aligned_cols=69 Identities=16% Similarity=0.127 Sum_probs=50.3
Q ss_pred EEeCCEEEEEecC-CcEEEEEcCCCCCCCCCCceE---EEeCCCCCceeEee----eeCCEEEEEeC-------------
Q psy16019 43 VHVQGRVVCALAD-GSVAIFRRGPDGQWDLSKYHT---VTLGLPHHSVRSLA----AVYNKVWCGYK------------- 101 (121)
Q Consensus 43 ~~~~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~---i~lg~~~~pV~~m~----~v~~~lw~~~g------------- 101 (121)
.|...++||.-.+ +.|++. |++..++ |.+... .....+. +.++.+||+..
T Consensus 98 ~~DG~~lfVnd~~~~rVavI--------dl~t~~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~ 168 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARV--------RCDVMKCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNME 168 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEE--------ETTTTEEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTT
T ss_pred CcCCCEEEEEcCCCCEEEEE--------ECCCceEeeEEeCCCC-CCCcceeeeecCCCcEEEEecccccccCCCCcccc
Confidence 4567799997764 459999 7778774 454321 2344555 45799999952
Q ss_pred ------CeEEEEeCCCCcEEEEEEe
Q psy16019 102 ------NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 102 ------n~I~Vi~~~tl~i~~~~~~ 120 (121)
+.+.+||++|+++..++.|
T Consensus 169 ~~~~~~~~vtvID~~t~~v~~qI~V 193 (595)
T 1fwx_A 169 DVANYVNVFTAVDADKWEVAWQVLV 193 (595)
T ss_dssp CGGGEEEEEEEEETTTTEEEEEEEE
T ss_pred cccccCceEEEEECCCCeEEEEEEe
Confidence 4899999999999998876
No 266
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=81.08 E-value=12 Score=29.37 Aligned_cols=54 Identities=9% Similarity=-0.158 Sum_probs=32.8
Q ss_pred CCeEEEEecC----CeEEEEECCcccceeeeeE-ecCCCEEEEEEeC--CEEEEEecCC--cEEEE
Q psy16019 5 LPTMWLGSQN----GSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQ--GRVVCALADG--SVAIF 61 (121)
Q Consensus 5 ~~tvwiGt~~----g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~--~~v~v~LanG--~l~Vy 61 (121)
...+..++.+ +.|+++++.+. + ...+ ..++.+.++.+.. ..++.+..+| .|.+|
T Consensus 161 G~~la~~~~~~~~~~~i~~~d~~~g--~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 161 GDLIAGLGFFGGGRVSLFTSNLSSG--G-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTV 223 (582)
T ss_dssp TTEEEEEEEEETTEEEEEEEETTTC--C-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEE
T ss_pred CCEEEEEEEcCCCCeEEEEEcCCCC--C-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEE
Confidence 3344445555 77999997662 2 2233 3446778888874 3566667778 55555
No 267
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=80.80 E-value=9.4 Score=28.16 Aligned_cols=58 Identities=9% Similarity=0.047 Sum_probs=40.1
Q ss_pred CeEEEEe-c-----CCeEEEEECCcccceeeeeEecCC-------CEEEEEEe--CCEEEEEec----CCcEEEEEcCC
Q psy16019 6 PTMWLGS-Q-----NGSVFVHSAVSQWRRCLHSIQLKD-------SVLNIVHV--QGRVVCALA----DGSVAIFRRGP 65 (121)
Q Consensus 6 ~tvwiGt-~-----~g~I~v~~~~~~~~~~l~~~~l~~-------~V~~i~~~--~~~v~v~La----nG~l~Vy~r~~ 65 (121)
+.+|+-- . +++|++|+..+ .+.++++.+|. .+.+|... ++.+|++-. ++.|.+|+...
T Consensus 78 g~L~v~D~g~~~~~~~~i~~~d~~t--g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 78 GIVWMLDNGNQSKSVPKLVAWDTLN--NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp SEEEEEECHHHHTSCCEEEEEETTT--TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred CcEEEEcCCCCcCCCCeEEEEECCC--CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 5677643 2 57999999875 34466666652 34677776 468999874 67899997653
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=80.45 E-value=15 Score=27.00 Aligned_cols=107 Identities=14% Similarity=0.035 Sum_probs=62.1
Q ss_pred CCeEEEEe-cC-CeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecC-CcEEEEEcCCCCCCCCCCceEE-E
Q psy16019 5 LPTMWLGS-QN-GSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTV-T 78 (121)
Q Consensus 5 ~~tvwiGt-~~-g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i-~ 78 (121)
.+.||... .+ +.|+.++.....++.+..-.+ .....|... ++++|++-+. +.|.+|..+ | ...+++ .
T Consensus 131 ~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d--g----~~~~~~~~ 203 (316)
T 1ijq_A 131 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLHSISSIDVN--G----GNRKTILE 203 (316)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETT--S----CSCEEEEE
T ss_pred CCEEEEEccCCCCeEEEEcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECCCCeEEEEecC--C----CceEEEee
Confidence 34454433 33 788888876533332211111 223345554 6799998764 578888543 2 223333 3
Q ss_pred eCC-CCCceeEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEE
Q psy16019 79 LGL-PHHSVRSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 79 lg~-~~~pV~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~ 119 (121)
.+. ...| ..|++-++.||.+.. ++|..+|..+++..+.+.
T Consensus 204 ~~~~~~~P-~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 204 DEKRLAHP-FSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp CTTTTSSE-EEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred cCCccCCc-EEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 321 2345 467777888877775 689999998887665553
No 269
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=79.97 E-value=5.3 Score=33.83 Aligned_cols=55 Identities=18% Similarity=0.372 Sum_probs=34.9
Q ss_pred CeEEEEecCCeEE-EEECCcc-cc---e-eeeeEe---cCCCEEEEEEe--CCEEEEEecCCcEEE
Q psy16019 6 PTMWLGSQNGSVF-VHSAVSQ-WR---R-CLHSIQ---LKDSVLNIVHV--QGRVVCALADGSVAI 60 (121)
Q Consensus 6 ~tvwiGt~~g~I~-v~~~~~~-~~---~-~l~~~~---l~~~V~~i~~~--~~~v~v~LanG~l~V 60 (121)
.-+++||++|.|+ |+..... .. . .+..++ -+.+|.+|... .+.+||+..++.+-|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 3589999999998 4332221 11 1 223333 34688888774 578999999987655
No 270
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=79.01 E-value=16 Score=26.40 Aligned_cols=93 Identities=12% Similarity=0.160 Sum_probs=49.3
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEecC------CcEEEEEcCCCCCCCCCCceEEEeCCCCCc--
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS-- 85 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~Lan------G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~p-- 85 (121)
..+++|+.... |. .+..+..|-.-.+....++++|+-.+. ..+.+|+... +.|. .+...+.|
T Consensus 184 ~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~-------~~~~~p~~r~ 254 (308)
T 1zgk_A 184 NSAECYYPERNEWR-MITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET-ETWT-------FVAPMKHRRS 254 (308)
T ss_dssp CCEEEEETTTTEEE-ECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT-TEEE-------ECCCCSSCCB
T ss_pred ceEEEEeCCCCeEe-eCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCC-CcEE-------ECCCCCCCcc
Confidence 35667776553 22 222222232222344457788876642 4577774332 2332 33332222
Q ss_pred eeEeeeeCCEEEEEeC-------CeEEEEeCCCCcEEE
Q psy16019 86 VRSLAAVYNKVWCGYK-------NKIHVVDPKSLDVIR 116 (121)
Q Consensus 86 V~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~~ 116 (121)
-.++...+++|++--| +.|.++|+++.+-+.
T Consensus 255 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 255 ALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred ceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 2245666888887543 579999998876543
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=78.79 E-value=17 Score=26.72 Aligned_cols=99 Identities=11% Similarity=0.144 Sum_probs=63.4
Q ss_pred CCCeEEE-EecCCeEEEEECCcccceeeeeEecC--CCEEEEEEeC-CEEEEEe-cCCcEEEEEcCCCCC-CCCCCceEE
Q psy16019 4 VLPTMWL-GSQNGSVFVHSAVSQWRRCLHSIQLK--DSVLNIVHVQ-GRVVCAL-ADGSVAIFRRGPDGQ-WDLSKYHTV 77 (121)
Q Consensus 4 ~~~tvwi-Gt~~g~I~v~~~~~~~~~~l~~~~l~--~~V~~i~~~~-~~v~v~L-anG~l~Vy~r~~~g~-wd~~~~~~i 77 (121)
..+++|+ ..+++.|+.++... +.++++++. .-.-.|.+.. ++++++- .++.|.+|+-..++. |. ...+
T Consensus 37 ~~~~L~aV~d~~~~I~~ld~~g---~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~---~~~~ 110 (255)
T 3qqz_A 37 QSNTLFSTINKPAAIVEMTTNG---DLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI---LKKI 110 (255)
T ss_dssp TTTEEEEEEETTEEEEEEETTC---CEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE---EEEE
T ss_pred CCCEEEEEECCCCeEEEEeCCC---CEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee---eeee
Confidence 3578997 55688999999874 567777765 2444566654 4554553 567899998776553 22 1223
Q ss_pred Ee--CC--CCCceeEeeee--CCEEEEEeC--C-eEEEEe
Q psy16019 78 TL--GL--PHHSVRSLAAV--YNKVWCGYK--N-KIHVVD 108 (121)
Q Consensus 78 ~l--g~--~~~pV~~m~~v--~~~lw~~~g--n-~I~Vi~ 108 (121)
.+ +. ++.-.--|+.. +++||+++. + .|+.++
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 33 21 13445667776 469999987 3 677776
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.58 E-value=20 Score=27.30 Aligned_cols=107 Identities=13% Similarity=0.021 Sum_probs=59.4
Q ss_pred CCeEEEEe-cC-CeEEEEECCcccceeeeeEecCCCEEEEEE--eCCEEEEEecC-CcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 5 LPTMWLGS-QN-GSVFVHSAVSQWRRCLHSIQLKDSVLNIVH--VQGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 5 ~~tvwiGt-~~-g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~--~~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.+.||... .+ +.|+.++.....++.+..-.+ .....|.. .++++|++-+. +.|.+|.. +| ...+.+--
T Consensus 213 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~~~~I~~~d~--dG----~~~~~~~~ 285 (386)
T 3v65_B 213 EGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAKHHVIERANL--DG----SHRKAVIS 285 (386)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-SCEEEEEEEGGGTEEEEEETTTTEEEEECT--TS----CSCEEEEC
T ss_pred CCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC-CCeeeEEEeCCCCEEEEEECCCCEEEEEeC--CC----CeeEEEEE
Confidence 34444433 33 678887766533332211111 12334454 47899999765 55777743 22 22233221
Q ss_pred CCCCCceeEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEE
Q psy16019 80 GLPHHSVRSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 80 g~~~~pV~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~ 119 (121)
.....| ..|++.++.||.+.. ++|..+|..+++..+.+.
T Consensus 286 ~~~~~P-~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 286 QGLPHP-FAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp SSCSSE-EEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCCc-eEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 112345 467778888877664 689999987877666554
No 273
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=77.69 E-value=17 Score=26.01 Aligned_cols=17 Identities=24% Similarity=0.384 Sum_probs=13.2
Q ss_pred CeEEEEeCCCCcEEEEE
Q psy16019 102 NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 102 n~I~Vi~~~tl~i~~~~ 118 (121)
++|+++|..+.+..+.+
T Consensus 152 ~~l~~~d~~~~~~~~~l 168 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEF 168 (347)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCeEEeee
Confidence 57999999998874444
No 274
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=76.89 E-value=18 Score=26.08 Aligned_cols=93 Identities=17% Similarity=0.276 Sum_probs=48.9
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEecC------CcEEEEEcCCCCCCCCCCceEEEeCCCCCc--
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS-- 85 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~Lan------G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~p-- 85 (121)
..+++|+..+. |++ +..+..|-.-.+....++++|+-.+- ..+-+|+... +.|. .+...+.|
T Consensus 175 ~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~r~ 245 (318)
T 2woz_A 175 NRVFIYNPKKGDWKD-LAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKT-NKWE-------VMTEFPQERS 245 (318)
T ss_dssp CCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTT-CCEE-------ECCCCSSCCB
T ss_pred ceEEEEcCCCCEEEE-CCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCC-CeEE-------ECCCCCCccc
Confidence 35777886653 222 22222232223444567777776531 2456674332 3343 23322222
Q ss_pred eeEeeeeCCEEEEEeC----------------CeEEEEeCCCCcEEE
Q psy16019 86 VRSLAAVYNKVWCGYK----------------NKIHVVDPKSLDVIR 116 (121)
Q Consensus 86 V~~m~~v~~~lw~~~g----------------n~I~Vi~~~tl~i~~ 116 (121)
-.++...+++|++--| +.++++|+++.+=++
T Consensus 246 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 246 SISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp SCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred ceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 1246667888887432 568999998876543
No 275
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=76.83 E-value=19 Score=26.07 Aligned_cols=89 Identities=20% Similarity=0.294 Sum_probs=46.4
Q ss_pred eEEEEECCcc-cceeeeeEecCCCE--EEEEEeCCEEEEEecC-------CcEEEEEcCCCCCCCCCCceEEEeCCCCCc
Q psy16019 16 SVFVHSAVSQ-WRRCLHSIQLKDSV--LNIVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS 85 (121)
Q Consensus 16 ~I~v~~~~~~-~~~~l~~~~l~~~V--~~i~~~~~~v~v~Lan-------G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~p 85 (121)
.+++|+.... |++ +. .+|.+. .+....++++|+-.+. ..+.+|+... +.|. .+...+.|
T Consensus 128 ~~~~yd~~~~~W~~-~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~ 196 (318)
T 2woz_A 128 SVLCYDPVAAKWSE-VK--NLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKK-GDWK-------DLAPMKTP 196 (318)
T ss_dssp EEEEEETTTTEEEE-EC--CCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTT-TEEE-------EECCCSSC
T ss_pred eEEEEeCCCCCEeE-CC--CCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCC-CEEE-------ECCCCCCC
Confidence 4677776552 221 22 233221 1233467777776541 3467774332 2232 23222222
Q ss_pred e--eEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 86 V--RSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 86 V--~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
- .++...+++|++--| +.+.++|+++.+-+
T Consensus 197 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 197 RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred cccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 2 256667888887543 56889998887543
No 276
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=76.51 E-value=7.3 Score=32.84 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=35.3
Q ss_pred eEEEEecCCeEEEE-ECCcccceeeeeEe---cCCCEEEEEEe--C--CEEEEEecCCcEEE
Q psy16019 7 TMWLGSQNGSVFVH-SAVSQWRRCLHSIQ---LKDSVLNIVHV--Q--GRVVCALADGSVAI 60 (121)
Q Consensus 7 tvwiGt~~g~I~v~-~~~~~~~~~l~~~~---l~~~V~~i~~~--~--~~v~v~LanG~l~V 60 (121)
-+++||++|.|+=. ..... ...+..++ -+.+|..|... . ..+||+..++.+-|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~-~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHA-VHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSS-EEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCC-ceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 68999999999843 43321 12233333 34688888775 3 67999999886655
No 277
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=75.10 E-value=7.7 Score=31.52 Aligned_cols=54 Identities=15% Similarity=0.280 Sum_probs=35.0
Q ss_pred eEEEEecCCeEEEEECCcccc----e--eeeeEec---CCCEEEEEEe--CCEEEEEecCCcEEE
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWR----R--CLHSIQL---KDSVLNIVHV--QGRVVCALADGSVAI 60 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~----~--~l~~~~l---~~~V~~i~~~--~~~v~v~LanG~l~V 60 (121)
-+++||++|.|+=.-...... + .+..+++ +.+|.+|... ..++||+..++.+-|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 589999999998544322111 1 2334443 4689888876 468999999886554
No 278
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=74.81 E-value=20 Score=25.53 Aligned_cols=92 Identities=11% Similarity=0.154 Sum_probs=48.7
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEecC------CcEEEEEcCCCCCCCCCCceEEEeCCCCCc--
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS-- 85 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~Lan------G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~p-- 85 (121)
..+++|+..+. |++ +..+..|-.-.+....++++|+-.+. ..+.+|+... +.| ..+...+.|
T Consensus 173 ~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W-------~~~~~~~~~r~ 243 (302)
T 2xn4_A 173 STVECYNATTNEWTY-IAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTT-NAW-------RQVADMNMCRR 243 (302)
T ss_dssp CCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTT-TEE-------EEECCCSSCCB
T ss_pred cEEEEEeCCCCcEEE-CCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCC-CCE-------eeCCCCCCccc
Confidence 35777776553 222 23232232223444557777776542 3577774322 223 233332222
Q ss_pred eeEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 86 VRSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 86 V~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
-.++...+++|++--| +.|.++|+++.+-+
T Consensus 244 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 244 NAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred cCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 1245666888888654 35999999887543
No 279
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=74.72 E-value=13 Score=30.96 Aligned_cols=56 Identities=13% Similarity=0.297 Sum_probs=35.4
Q ss_pred CeEEEEecCCeEE-EEECCcc-c---c-eeeeeEec------------CCCEEEEEEe--CCEEEEEecCCcEEEE
Q psy16019 6 PTMWLGSQNGSVF-VHSAVSQ-W---R-RCLHSIQL------------KDSVLNIVHV--QGRVVCALADGSVAIF 61 (121)
Q Consensus 6 ~tvwiGt~~g~I~-v~~~~~~-~---~-~~l~~~~l------------~~~V~~i~~~--~~~v~v~LanG~l~Vy 61 (121)
.-|++||++|.|+ ++..... . . ..+..+++ +.+|.+|... ...+||+..++.+-|=
T Consensus 421 tVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 421 TVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp EEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEEEEECSSCEEEEE
T ss_pred EEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEEEEEecCeEEEee
Confidence 4679999999998 4432211 0 1 12233332 4578887765 5689999999887663
No 280
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=74.56 E-value=25 Score=26.44 Aligned_cols=106 Identities=15% Similarity=0.151 Sum_probs=62.1
Q ss_pred CCe-EEEEecCCeEEEEECCcccceeeeeEe---c--CCCEEEEEEe-----CCEEEEEecC--------CcEEEEEcCC
Q psy16019 5 LPT-MWLGSQNGSVFVHSAVSQWRRCLHSIQ---L--KDSVLNIVHV-----QGRVVCALAD--------GSVAIFRRGP 65 (121)
Q Consensus 5 ~~t-vwiGt~~g~I~v~~~~~~~~~~l~~~~---l--~~~V~~i~~~-----~~~v~v~Lan--------G~l~Vy~r~~ 65 (121)
... ||+....|.|++++......+.+..+. . ....+.|..+ ++.+|++-.. ..|..|+...
T Consensus 28 dG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~ 107 (353)
T 2g8s_A 28 DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSD 107 (353)
T ss_dssp TTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECT
T ss_pred CCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECC
Confidence 345 999999999999985442112222121 1 1356788887 5789998643 3576665543
Q ss_pred CCCCCCCCceEEEeCCC-----CCceeEeeee-CCEEEEEeCC---------------eEEEEeCCC
Q psy16019 66 DGQWDLSKYHTVTLGLP-----HHSVRSLAAV-YNKVWCGYKN---------------KIHVVDPKS 111 (121)
Q Consensus 66 ~g~wd~~~~~~i~lg~~-----~~pV~~m~~v-~~~lw~~~gn---------------~I~Vi~~~t 111 (121)
++ ..+.+.+.+--+.| .+--..|+.- ++.||++.|. +|+-|+++.
T Consensus 108 ~~-~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 108 DL-SKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp TS-SBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred CC-CCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 22 12334444322222 1112456665 5799999863 799998864
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=74.17 E-value=29 Score=27.01 Aligned_cols=100 Identities=12% Similarity=0.147 Sum_probs=56.6
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEe-CCEEEEEecCC-----cEEEEEcCCCCCCCCCCceEE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHV-QGRVVCALADG-----SVAIFRRGPDGQWDLSKYHTV 77 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~-~~~v~v~LanG-----~l~Vy~r~~~g~wd~~~~~~i 77 (121)
.+.||+....+.|+.++..+. + +..+.-+ .....|... ++.+|++...+ .+..+.+ ++.+. ....+
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g--~-v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~--~~~~~--~~~~~ 224 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQ--Y-VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTR--ASGFT--ERLSL 224 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTT--E-EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECG--GGTTC--CEEEE
T ss_pred CCEEEEEeCCCCEEEEECCCC--E-EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEEC--CCCee--ccccc
Confidence 467888776688888887542 2 2222112 346666665 34599998644 1333432 23222 12233
Q ss_pred EeCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcE
Q psy16019 78 TLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDV 114 (121)
Q Consensus 78 ~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i 114 (121)
.-.. .| ..+++. ++.||++.. ++|+.||+.++++
T Consensus 225 ~~~~--~P-~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 225 CNAR--GA-KTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EECS--SB-CCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred cccC--CC-CEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 2222 33 233433 588998875 5799999988877
No 282
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=73.57 E-value=6.3 Score=30.55 Aligned_cols=88 Identities=15% Similarity=0.201 Sum_probs=50.5
Q ss_pred CCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec-CCcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEee
Q psy16019 14 NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLA 90 (121)
Q Consensus 14 ~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La-nG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m~ 90 (121)
.|.||-|+..+ .+.....+..|. -|... +..+||+-. .+.|.+|....+| .+.+.+++.++. .---|.
T Consensus 202 ~g~vyr~d~~~-~~~~~~~l~~pN---Gia~spDg~~lYvadt~~~~I~~~~~~~~g--~l~~~~~~~~~g---~PDGi~ 272 (355)
T 3sre_A 202 WSFVTYYSPND-VRVVAEGFDFAN---GINISPDGKYVYIAELLAHKIHVYEKHANW--TLTPLRVLSFDT---LVDNIS 272 (355)
T ss_dssp CEEEEEECTTC-CEEEEEEESSEE---EEEECTTSSEEEEEEGGGTEEEEEEECTTS--CEEEEEEEECSS---EEEEEE
T ss_pred ccEEEEEECCe-EEEeecCCcccC---cceECCCCCEEEEEeCCCCeEEEEEECCCC--cEecCEEEeCCC---CCceEE
Confidence 46777776532 122222233332 34554 447998864 5789999887655 244445555432 234566
Q ss_pred ee-C-CEEEEEeC-C--eEEEEeCC
Q psy16019 91 AV-Y-NKVWCGYK-N--KIHVVDPK 110 (121)
Q Consensus 91 ~v-~-~~lw~~~g-n--~I~Vi~~~ 110 (121)
+- + +.||+|+. + +|..+|++
T Consensus 273 vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 273 VDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp ECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EeCCCCcEEEEecCCceEEEEECCC
Confidence 65 3 79999875 3 55555665
No 283
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=72.29 E-value=23 Score=25.12 Aligned_cols=92 Identities=13% Similarity=0.178 Sum_probs=47.8
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEec------CCcEEEEEcCCCCCCCCCCceEEEeCCCCCce-
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV- 86 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~La------nG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV- 86 (121)
..+++|+.... |+ .+..+..+-.-.+....++++|+-.+ ...+.+|+... +.| -.+...+.|.
T Consensus 128 ~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W-------~~~~~~p~~r~ 198 (301)
T 2vpj_A 128 TSMERYDPNIDQWS-MLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHT-GHW-------TNVTPMATKRS 198 (301)
T ss_dssp CEEEEEETTTTEEE-EEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEE-------EEECCCSSCCB
T ss_pred ceEEEEcCCCCeEE-ECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCC-CcE-------EeCCCCCcccc
Confidence 35777776553 22 22222222122233344777777643 24466774322 223 2333322332
Q ss_pred -eEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 87 -RSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 87 -~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
.++...+++|++--| +.+.++|+++.+-+
T Consensus 199 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 199 GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 245666888887544 56999999887654
No 284
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=71.49 E-value=25 Score=25.10 Aligned_cols=91 Identities=13% Similarity=0.152 Sum_probs=47.4
Q ss_pred eEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEec----------CCcEEEEEcCCCCCCCCCCceEEEeCCCCC
Q psy16019 16 SVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALA----------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHH 84 (121)
Q Consensus 16 ~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~La----------nG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~ 84 (121)
.+++|+.... |+ .+..+..|-.-.+....++++|+..+ ...+.+|+... +.|. .+...+.
T Consensus 119 ~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~ 189 (306)
T 3ii7_A 119 LFECYDTRTESWH-TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT-ETWT-------ELCPMIE 189 (306)
T ss_dssp CEEEEETTTTEEE-EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTT-TEEE-------EECCCSS
T ss_pred eEEEEeCCCCceE-eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCC-CeEE-------ECCCccc
Confidence 5677776553 22 22222222222233445778887664 34466664332 1232 2333222
Q ss_pred ce--eEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 85 SV--RSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 85 pV--~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
|- .++...+++|++--| +.+.++|+++.+-+
T Consensus 190 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 190 ARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp CCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred hhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence 22 245566888888544 57899999886543
No 285
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=71.42 E-value=39 Score=27.37 Aligned_cols=101 Identities=10% Similarity=0.056 Sum_probs=49.8
Q ss_pred CCeEEEEecCC----eEEEEECCcccceeeeeEec-CCCEEEEEEeCCEEEEEec----CCcEEEEEcCCCCCCCCCCce
Q psy16019 5 LPTMWLGSQNG----SVFVHSAVSQWRRCLHSIQL-KDSVLNIVHVQGRVVCALA----DGSVAIFRRGPDGQWDLSKYH 75 (121)
Q Consensus 5 ~~tvwiGt~~g----~I~v~~~~~~~~~~l~~~~l-~~~V~~i~~~~~~v~v~La----nG~l~Vy~r~~~g~wd~~~~~ 75 (121)
...+.++..++ .|++++..+ .....+.- .+.+......++.+|+... ++.|.+++..... .....
T Consensus 238 G~~l~~~~~~~~~~~~l~~~~~~~---~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~---~~~~~ 311 (695)
T 2bkl_A 238 GKYLFVYILRGWSENDVYWKRPGE---KDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPA---RASWK 311 (695)
T ss_dssp SCCEEEEEEETTTEEEEEEECTTC---SSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCS---GGGCE
T ss_pred CCEEEEEEeCCCCceEEEEEcCCC---CceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCC---ccCCe
Confidence 34455555444 566664332 12223322 2344443334555444332 3566666332111 00113
Q ss_pred EEEeCCCCCceeEeeeeCCEEEEEeC----CeEEEEeCCC
Q psy16019 76 TVTLGLPHHSVRSLAAVYNKVWCGYK----NKIHVVDPKS 111 (121)
Q Consensus 76 ~i~lg~~~~pV~~m~~v~~~lw~~~g----n~I~Vi~~~t 111 (121)
.+.-..+...+..+...++.+.+... .+|++++...
T Consensus 312 ~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 312 EIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp EEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred EEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence 34333334678888888888877664 4788888643
No 286
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=71.38 E-value=30 Score=25.95 Aligned_cols=102 Identities=12% Similarity=0.061 Sum_probs=62.4
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEec----CCCEEEEEEeCC-----EEEEEecC------CcEEEEEcCCCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL----KDSVLNIVHVQG-----RVVCALAD------GSVAIFRRGPDGQW 69 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l----~~~V~~i~~~~~-----~v~v~Lan------G~l~Vy~r~~~g~w 69 (121)
.+.+|+....|.|++++ ... .+.+..+.. ....+.|..+.+ .+||+-.. +.|..|+... +.
T Consensus 41 dG~l~V~e~~g~I~~i~-~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~-~~- 116 (352)
T 2ism_A 41 DGGMLIAERPGRIRLFR-EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLG-ER- 116 (352)
T ss_dssp TSCEEEEETTTEEEEEE-TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECS-SC-
T ss_pred CCeEEEEeCCCeEEEEE-CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCC-CC-
Confidence 45799999999999998 321 222322221 136788888875 99998874 6788886653 21
Q ss_pred CCCCceE-EE-eC---CCCCceeEeeee-CCEEEEEeC---------------CeEEEEeCCC
Q psy16019 70 DLSKYHT-VT-LG---LPHHSVRSLAAV-YNKVWCGYK---------------NKIHVVDPKS 111 (121)
Q Consensus 70 d~~~~~~-i~-lg---~~~~pV~~m~~v-~~~lw~~~g---------------n~I~Vi~~~t 111 (121)
+.+.+. +. +. ...+.-..|+.- ++.||++.| .+|+-|+++.
T Consensus 117 -~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 117 -GVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp -EEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred -cCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 223333 22 33 111122456655 478999875 3788888764
No 287
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=70.48 E-value=38 Score=27.78 Aligned_cols=105 Identities=11% Similarity=0.027 Sum_probs=54.2
Q ss_pred CCeEEEEe--cCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecC-CcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 5 LPTMWLGS--QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 5 ~~tvwiGt--~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
.+.||... +.++|+..+.....++.+..-.+ .....|... ++++|++-+. +.|.++.. +| ...+.+.-
T Consensus 138 ~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~-~~P~Glald~~~~~LY~aD~~~~~I~~~~~--dG----~~~~~~~~ 210 (619)
T 3s94_A 138 SGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI-YWPNGLTLDYEEQKLYWADAKLNFIHKSNL--DG----TNRQAVVK 210 (619)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-SSEEEEEEETTTTEEEEEETTTCCEEEESS--SC----CEEC----
T ss_pred CCeEEEeccCCCCEEEEEECCCCceEEEEeCCC-CCCcEEEEEccCCEEEEEeCCCCeEEEecC--CC----CccEEEEe
Confidence 34455443 23566666655432222211111 123345554 6899999764 45666632 22 11222211
Q ss_pred CCCCCceeEeeeeCCEEEEEeC--CeEEEEeCCCCcEEEE
Q psy16019 80 GLPHHSVRSLAAVYNKVWCGYK--NKIHVVDPKSLDVIRP 117 (121)
Q Consensus 80 g~~~~pV~~m~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~ 117 (121)
+.-..|. .|++.++.||.+.. ++|.++|..|++..+.
T Consensus 211 ~~~~~P~-gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 211 GSLPHPF-ALTLFEDILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp -----CC-CEEESSSEEEEECTTTCSEEEEESSSCCCCEE
T ss_pred CCCCCce-EEEEeCCEEEEecCCCCEEEEEECCCCcccEE
Confidence 1123453 66777889988775 6899999998865443
No 288
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=70.42 E-value=44 Score=27.51 Aligned_cols=95 Identities=9% Similarity=-0.013 Sum_probs=55.6
Q ss_pred CCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecC-CcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEee
Q psy16019 14 NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLA 90 (121)
Q Consensus 14 ~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m~ 90 (121)
.++|+.++.....++.+.. .+ .....|... .+++|++-+. +.|..+..+ | ...+++.-+ .+.|. .|+
T Consensus 145 ~~~I~r~~~dG~~~~~l~~-~~-~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d--G----~~~~v~~~~-l~~P~-gla 214 (628)
T 4a0p_A 145 KPKIDRAAMDGSERTTLVP-NV-GRANGLTIDYAKRRLYWTDLDTNLIESSNML--G----LNREVIADD-LPHPF-GLT 214 (628)
T ss_dssp SCEEEEEETTSCSCEEEEC-SC-SSEEEEEEETTTTEEEEEETTTTEEEEEETT--S----CSCEEEEEC-CSCEE-EEE
T ss_pred CCEEEEEeCCCCceEEEEC-CC-CCcceEEEccccCEEEEEECCCCEEEEEcCC--C----CceEEeecc-CCCce-EEE
Confidence 4455555554432222211 11 123345554 6899999775 567777543 2 122444322 23675 788
Q ss_pred eeCCEEEEEeC--CeEEEEeCCCCcEEEEE
Q psy16019 91 AVYNKVWCGYK--NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 91 ~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~ 118 (121)
+.++.||.+.. ++|..+|..|++-...+
T Consensus 215 v~~~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 215 QYQDYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EECCEEEEecCCCCEEEEEECCCCCceEEE
Confidence 88899988886 78999998888655444
No 289
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=70.24 E-value=27 Score=25.08 Aligned_cols=97 Identities=13% Similarity=0.152 Sum_probs=55.5
Q ss_pred CeEEEEe-cCCeEEEEECCcccceeeeeEecCCCEEEEEEe-CCEEEEEecC--C-cEEEEEcCCCCCCCCCCceE-EEe
Q psy16019 6 PTMWLGS-QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV-QGRVVCALAD--G-SVAIFRRGPDGQWDLSKYHT-VTL 79 (121)
Q Consensus 6 ~tvwiGt-~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~-~~~v~v~Lan--G-~l~Vy~r~~~g~wd~~~~~~-i~l 79 (121)
+.+|+.. .+++|+.|+... +....+..+..+..|... ++++||+... + .|..|... +|. ... ..+
T Consensus 43 g~lyv~d~~~~~I~~~d~~g---~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~-----~~~~~~~ 113 (306)
T 2p4o_A 43 GTIFVTNHEVGEIVSITPDG---NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGT-----VETLLTL 113 (306)
T ss_dssp SCEEEEETTTTEEEEECTTC---CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSC-----EEEEEEC
T ss_pred CCEEEEeCCCCeEEEECCCC---ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCe-----EEEEEeC
Confidence 4577765 789999998765 233345666778888775 5679998843 2 35555322 221 111 222
Q ss_pred CCCCCceeEee-eeCCEEEEEeC--CeEEEEeCCCC
Q psy16019 80 GLPHHSVRSLA-AVYNKVWCGYK--NKIHVVDPKSL 112 (121)
Q Consensus 80 g~~~~pV~~m~-~v~~~lw~~~g--n~I~Vi~~~tl 112 (121)
.....| .-+. ..++.++++.. ++|+++|+.+.
T Consensus 114 ~~~~~~-~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 114 PDAIFL-NGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp TTCSCE-EEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCcccc-CcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 111111 1122 22466777763 68999998765
No 290
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=70.06 E-value=14 Score=30.87 Aligned_cols=55 Identities=9% Similarity=0.090 Sum_probs=35.6
Q ss_pred CeEEEEecCCeEEEEE-CCcccc--e-eeeeEec---CCCEEEEEEe--CCEEEEEecCCcEEE
Q psy16019 6 PTMWLGSQNGSVFVHS-AVSQWR--R-CLHSIQL---KDSVLNIVHV--QGRVVCALADGSVAI 60 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~-~~~~~~--~-~l~~~~l---~~~V~~i~~~--~~~v~v~LanG~l~V 60 (121)
.-+++||++|.|+-.- ..+... . .+..+++ +.+|.+|... ...+||+..++.+-|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 3579999999998433 222101 1 2233433 4688888875 468999999977665
No 291
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=69.67 E-value=7.7 Score=31.38 Aligned_cols=54 Identities=13% Similarity=0.271 Sum_probs=34.1
Q ss_pred eEEEEecCCeEEEEECCcccce--eeeeEec---CCCEE-EEEEeCCEEEEEecCCcEEE
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRR--CLHSIQL---KDSVL-NIVHVQGRVVCALADGSVAI 60 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~--~l~~~~l---~~~V~-~i~~~~~~v~v~LanG~l~V 60 (121)
-+++||++|.|+=......... ....+.+ +.+|. .+....+.+||+..++.+-|
T Consensus 420 V~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi~~~l~~~~~~Lyv~s~~~V~~v 479 (527)
T 4fww_A 420 VAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQRDVSRLGDHLLFASGDQVFQV 479 (527)
T ss_dssp EEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCBCSCCEEETTEEEEEETTEEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCceeehhcccCCCEEEEEECCEEEEE
Confidence 4899999999996554432221 1222332 24553 35667789999998876555
No 292
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=68.74 E-value=30 Score=24.99 Aligned_cols=33 Identities=3% Similarity=-0.090 Sum_probs=21.9
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKD 37 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~ 37 (121)
.....+..+.+++.|++++.... +.......|.
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~g--~~~~~~~~~~ 122 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLATL--EENVVYQVPA 122 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTTC--CEEEEEECCT
T ss_pred CCCCEEEEEeCCCeEEEEECCCC--cceeeeechh
Confidence 44567888888889999998773 3333345553
No 293
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=68.23 E-value=19 Score=30.47 Aligned_cols=63 Identities=10% Similarity=0.108 Sum_probs=38.3
Q ss_pred EEEEEecCCcEEEEEcCCCCCCCCCCceE---EEeCCCCCceeEeeee--CCEEEEEeCCeEEEEeCC
Q psy16019 48 RVVCALADGSVAIFRRGPDGQWDLSKYHT---VTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPK 110 (121)
Q Consensus 48 ~v~v~LanG~l~Vy~r~~~g~wd~~~~~~---i~lg~~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~ 110 (121)
-+|+|..+|.|.=.-....+.+..-...+ +.+-.++.||+.|.+. .+.|+++...+|.=+...
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kVPl~ 498 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLPLH 498 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEEESC
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEEEhh
Confidence 49999999997521111112111111111 3454456899999987 489999999988766544
No 294
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=67.84 E-value=31 Score=24.79 Aligned_cols=93 Identities=15% Similarity=0.232 Sum_probs=47.7
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEec-CC-----cEEEEEcCCCCCCCCCCceEEEeCCCCCce-
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV- 86 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~La-nG-----~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV- 86 (121)
..+++|+.... |++ +..+..|-.-.+....++++|+-.+ ++ .+.+|+... +.|. .+...+.|-
T Consensus 165 ~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~r~ 235 (315)
T 4asc_A 165 NKMCVYDPKKFEWKE-LAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD-NKWA-------PFEAFPQERS 235 (315)
T ss_dssp CCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT-TEEE-------EECCCSSCCB
T ss_pred ceEEEEeCCCCeEEE-CCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCC-CeEE-------ECCCCCCccc
Confidence 35777776653 222 2223223222234445777777543 22 466774322 2332 333322222
Q ss_pred -eEeeeeCCEEEEEeC----------------CeEEEEeCCCCcEEE
Q psy16019 87 -RSLAAVYNKVWCGYK----------------NKIHVVDPKSLDVIR 116 (121)
Q Consensus 87 -~~m~~v~~~lw~~~g----------------n~I~Vi~~~tl~i~~ 116 (121)
.++...+++|++--| +.|.++|+++.+-+.
T Consensus 236 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 236 SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEG 282 (315)
T ss_dssp SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEE
T ss_pred ceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhh
Confidence 245566888887433 458899998876443
No 295
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=67.70 E-value=30 Score=24.58 Aligned_cols=92 Identities=13% Similarity=0.111 Sum_probs=47.9
Q ss_pred eEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEec--------CCcEEEEEcCCCCCCCCCCceEEEeCCCCCce-
Q psy16019 16 SVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALA--------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV- 86 (121)
Q Consensus 16 ~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~La--------nG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV- 86 (121)
.+++|+.....=+.+..+..|-.-.+....++++|+..+ ...+.+|+... +.|. .+...+.|-
T Consensus 125 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~r~ 196 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATT-NEWT-------YIAEMSTRRS 196 (302)
T ss_dssp EEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTT-TEEE-------EECCCSSCCB
T ss_pred eEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCC-CcEE-------ECCCCccccc
Confidence 566777655311122323223222334455778887643 23466774322 2232 233322222
Q ss_pred -eEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 87 -RSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 87 -~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
.++...+++|++--| +.+.++|+++.+-+
T Consensus 197 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 197 GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp SCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred cccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 245666888888543 47999999887544
No 296
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=67.25 E-value=34 Score=24.98 Aligned_cols=89 Identities=11% Similarity=0.149 Sum_probs=44.6
Q ss_pred CCeEEE--EecCCeEEEEECCc---ccceeeeeEe-cCCCEEEEEEeCCEEEEEecC-----------CcEEEEEcCCCC
Q psy16019 5 LPTMWL--GSQNGSVFVHSAVS---QWRRCLHSIQ-LKDSVLNIVHVQGRVVCALAD-----------GSVAIFRRGPDG 67 (121)
Q Consensus 5 ~~tvwi--Gt~~g~I~v~~~~~---~~~~~l~~~~-l~~~V~~i~~~~~~v~v~Lan-----------G~l~Vy~r~~~g 67 (121)
.+.|++ |.....+++|+... .|++ +..+. .|-.=.+....++++|+-.+. ..+-+|+-.. .
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~-~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~-~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTA-LAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT-N 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEE-CCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTT-T
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeE-CCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCC-C
Confidence 455666 33456789999763 2332 33333 222223445567888886553 3466774332 2
Q ss_pred CCCCCCceEEEeCCCCCce--eEeeeeCCEEEEEeC
Q psy16019 68 QWDLSKYHTVTLGLPHHSV--RSLAAVYNKVWCGYK 101 (121)
Q Consensus 68 ~wd~~~~~~i~lg~~~~pV--~~m~~v~~~lw~~~g 101 (121)
.|..-.+ +. | .|- .++...+++||+--|
T Consensus 97 ~W~~~~~----~~-p-~~r~~~~~~~~~~~iyv~GG 126 (357)
T 2uvk_A 97 SWVKLMS----HA-P-MGMAGHVTFVHNGKAYVTGG 126 (357)
T ss_dssp EEEECSC----CC-S-SCCSSEEEEEETTEEEEEEC
T ss_pred cEEECCC----CC-C-cccccceEEEECCEEEEEeC
Confidence 3432111 11 1 222 234557889888554
No 297
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=66.19 E-value=9.4 Score=31.34 Aligned_cols=55 Identities=9% Similarity=0.119 Sum_probs=35.8
Q ss_pred CeEEEEecCCeEEEEECCcccc--eeeeeEec---CCCEE-EEEEe--CCEEEEEecCCcEEE
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWR--RCLHSIQL---KDSVL-NIVHV--QGRVVCALADGSVAI 60 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~--~~l~~~~l---~~~V~-~i~~~--~~~v~v~LanG~l~V 60 (121)
.-+++||++|.|+=.......+ .....+++ +.+|. .|... ..++||+..++.+-|
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3589999999998655433211 23445554 35776 77764 568999988876555
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=66.13 E-value=40 Score=25.38 Aligned_cols=104 Identities=13% Similarity=0.062 Sum_probs=61.6
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeEec----CCCEEEEEEeC-----CEEEEEecC--------CcEEEEEcCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSIQL----KDSVLNIVHVQ-----GRVVCALAD--------GSVAIFRRGPDG 67 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l----~~~V~~i~~~~-----~~v~v~Lan--------G~l~Vy~r~~~g 67 (121)
.+.+|+...+|+|++++... ++.+..+.+ ....+.|.... +.+||+-+. +.|..|+...+.
T Consensus 39 dG~l~V~e~~g~I~~~d~~G--~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~ 116 (354)
T 3a9g_A 39 GGRYLVTERPGRLVLISPSG--KKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGST 116 (354)
T ss_dssp TTEEEEEETTTEEEEECSSC--EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSS
T ss_pred CCeEEEEeCCCEEEEEeCCC--ceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCC
Confidence 45799999999999997433 122322221 13578899885 499998763 567777654321
Q ss_pred CCCCCCceEE-E-eCC-CCCceeEeeee-CCEEEEEeC---------------CeEEEEeCCC
Q psy16019 68 QWDLSKYHTV-T-LGL-PHHSVRSLAAV-YNKVWCGYK---------------NKIHVVDPKS 111 (121)
Q Consensus 68 ~wd~~~~~~i-~-lg~-~~~pV~~m~~v-~~~lw~~~g---------------n~I~Vi~~~t 111 (121)
. .+.+.+++ . +.. ..+.-..|+.- ++.||++.| .+|+-|+++.
T Consensus 117 ~-~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 117 F-KLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp C-CEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred c-CcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 0 12233332 2 221 11223456655 478999876 2788888754
No 299
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=64.83 E-value=49 Score=26.00 Aligned_cols=94 Identities=12% Similarity=0.094 Sum_probs=54.7
Q ss_pred CCeEEEEecCC-eEEEEECCcccceeeeeEecC---------CCEEEEEEe-----CCEEEEEecC-------------C
Q psy16019 5 LPTMWLGSQNG-SVFVHSAVSQWRRCLHSIQLK---------DSVLNIVHV-----QGRVVCALAD-------------G 56 (121)
Q Consensus 5 ~~tvwiGt~~g-~I~v~~~~~~~~~~l~~~~l~---------~~V~~i~~~-----~~~v~v~Lan-------------G 56 (121)
.+.||++...| +|++++..+...+.+. .++ ...+.|..+ ++.+|++-+. .
T Consensus 37 dG~l~V~e~~gg~I~~~~~~~g~~~~~~--~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~ 114 (454)
T 1cru_A 37 DNQIWLTERATGKILRVNPESGSVKTVF--QVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQT 114 (454)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEE--ECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEE
T ss_pred CCcEEEEEcCCCEEEEEECCCCcEeEEe--cCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccccccc
Confidence 46799999986 6999875432122222 232 355689988 6799999863 3
Q ss_pred cEEEEEcCCCCCCCCCCceEE-E-eCC-CCCceeEeeee-CCEEEEEeC
Q psy16019 57 SVAIFRRGPDGQWDLSKYHTV-T-LGL-PHHSVRSLAAV-YNKVWCGYK 101 (121)
Q Consensus 57 ~l~Vy~r~~~g~wd~~~~~~i-~-lg~-~~~pV~~m~~v-~~~lw~~~g 101 (121)
.|.-|+...+. -.+.+.++| . +.. ..+--..|+.- ++.||++.|
T Consensus 115 ~v~r~~~~~~~-~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 115 IIRRYTYNKST-DTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEEETTT-TEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEEEEEECCCC-CCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 45555543221 123344443 2 322 12445667765 578999876
No 300
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=64.44 E-value=37 Score=24.37 Aligned_cols=93 Identities=8% Similarity=0.084 Sum_probs=47.3
Q ss_pred CeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEec------CCcEEEEEcCCCCCCCCCCceEEEeCCCCCce--
Q psy16019 15 GSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-- 86 (121)
Q Consensus 15 g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~La------nG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV-- 86 (121)
..+++|+.....=+.+..+..|-.=.+....++++|+..+ ...+.+|+... +.|. .+...+.|-
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~r~~ 161 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPER-DEWH-------LVAPMLTRRIG 161 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTT-TEEE-------ECCCCSSCCBS
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCC-CeEe-------ECCCCCccccc
Confidence 3577777655311122222222122233445778887654 23466664332 2342 232212222
Q ss_pred eEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 87 RSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 87 ~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
.++...+++||+--| +.+.++|+.+.+-+
T Consensus 162 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 162 VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 245556888888544 56899998876543
No 301
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=64.31 E-value=14 Score=31.40 Aligned_cols=34 Identities=15% Similarity=0.291 Sum_probs=30.4
Q ss_pred CceeEeeeeCCEEEEEeCCeEEEEeCCCCcEEEE
Q psy16019 84 HSVRSLAAVYNKVWCGYKNKIHVVDPKSLDVIRP 117 (121)
Q Consensus 84 ~pV~~m~~v~~~lw~~~gn~I~Vi~~~tl~i~~~ 117 (121)
.++.-|++.++.|++|..|.|+.+|..+++.+..
T Consensus 29 ~~~~~l~~d~~~lyVGA~n~ly~L~~~~L~~~~~ 62 (727)
T 2uzx_B 29 TPIQNVILHEHHIFLGATNYIYVLNEEDLQKVAE 62 (727)
T ss_dssp SCEEEEEEETTEEEEEETTEEEEEETTTTEEEEE
T ss_pred CceeeEEEECCEEEEEeccEEEEeChhhccccce
Confidence 5899999999999999999999999888887654
No 302
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=63.55 E-value=49 Score=25.55 Aligned_cols=101 Identities=8% Similarity=0.096 Sum_probs=58.4
Q ss_pred CCeEEEEecCCeEEEEECCcccceeeeeE-ecCCCEEEEEEe--CCEEEEEecCC-----cEEEEEcCCCCCCCCCCceE
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHV--QGRVVCALADG-----SVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~--~~~v~v~LanG-----~l~Vy~r~~~g~wd~~~~~~ 76 (121)
.+.||+..+.+.|+.|+.... + +..+ .-......|... .+.+||+-..+ .+.++.+ +|.+. ....
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~--~-v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~--~g~~~--~~~~ 221 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKE--Y-VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR--ESGFK--VITE 221 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTT--E-EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG--GGTSC--SEEE
T ss_pred CCeEEEEeCCCcEEEEECCCC--E-EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC--CCcee--eeee
Confidence 456888877788888887652 2 2222 222456667765 34699998732 2444443 34332 2233
Q ss_pred EEeCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcEE
Q psy16019 77 VTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDVI 115 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i~ 115 (121)
+.-.. .| ..+++. ++.||++.. ++|+.+++.+.+..
T Consensus 222 l~~~~--~p-~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 222 LTKGQ--NC-NGAETHPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp EEECS--SC-CCEEECTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred eccCC--Cc-eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 32222 22 334444 578988764 68999999887663
No 303
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=63.49 E-value=64 Score=26.84 Aligned_cols=96 Identities=19% Similarity=0.253 Sum_probs=54.9
Q ss_pred CCeEEEEecCCeEEEEE-CCcccceeeeeEecC----CCEEEEEEe---CCEEEEEecCC-------cEEEEEcCCC-CC
Q psy16019 5 LPTMWLGSQNGSVFVHS-AVSQWRRCLHSIQLK----DSVLNIVHV---QGRVVCALADG-------SVAIFRRGPD-GQ 68 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~-~~~~~~~~l~~~~l~----~~V~~i~~~---~~~v~v~LanG-------~l~Vy~r~~~-g~ 68 (121)
.+++|+|++.|.|+... .-..|++....+... ..|.+|... .+.|||+...+ ...||+-..+ ..
T Consensus 35 ~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~T 114 (737)
T 2cn3_A 35 KDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGET 114 (737)
T ss_dssp TTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSS
T ss_pred CCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCC
Confidence 46899999999887765 333444421111111 257788875 47899998632 3566755443 35
Q ss_pred CCCCCceEEEeCC------CC-CceeEeeee---CCEEEEEeC--CeEE
Q psy16019 69 WDLSKYHTVTLGL------PH-HSVRSLAAV---YNKVWCGYK--NKIH 105 (121)
Q Consensus 69 wd~~~~~~i~lg~------~~-~pV~~m~~v---~~~lw~~~g--n~I~ 105 (121)
|. .+.... |. ..+.+|++. .+.||++.. ..|+
T Consensus 115 W~-----~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~ 158 (737)
T 2cn3_A 115 WE-----KTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLW 158 (737)
T ss_dssp CE-----EEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEE
T ss_pred cc-----cCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEE
Confidence 74 232221 11 123566654 378999883 4555
No 304
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=63.08 E-value=39 Score=24.24 Aligned_cols=92 Identities=9% Similarity=0.073 Sum_probs=49.0
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCEEEEEEeCCEEEEEecC-------CcEEEEEcCCCCCCCCCCceEEEeCCCCCc-
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSVLNIVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS- 85 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V~~i~~~~~~v~v~Lan-------G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~p- 85 (121)
..+++|+.... |++ +..++.|-.=.+....++++|+-.+. ..+.+|+... ..|. .+...+.|
T Consensus 117 ~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~r 187 (315)
T 4asc_A 117 DSVMCYDRLSFKWGE-SDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK-FEWK-------ELAPMQTAR 187 (315)
T ss_dssp CCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTT-TEEE-------ECCCCSSCC
T ss_pred ceEEEECCCCCcEeE-CCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCC-CeEE-------ECCCCCCch
Confidence 35777776653 222 22222222222344567788877654 3577774332 2343 22221122
Q ss_pred -eeEeeeeCCEEEEEeC-------CeEEEEeCCCCcEE
Q psy16019 86 -VRSLAAVYNKVWCGYK-------NKIHVVDPKSLDVI 115 (121)
Q Consensus 86 -V~~m~~v~~~lw~~~g-------n~I~Vi~~~tl~i~ 115 (121)
-.++...+++|++--| +.+.++|+++.+-+
T Consensus 188 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 188 SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 2245666888887433 36899999887543
No 305
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=63.05 E-value=71 Score=27.24 Aligned_cols=96 Identities=15% Similarity=0.061 Sum_probs=55.0
Q ss_pred CeEEEEECCcccceeeeeEecCCCEEEEEE--eCCEEEEEecC-CcEEEEEcCCCCCCCCCCceEE-EeC-CCCCceeEe
Q psy16019 15 GSVFVHSAVSQWRRCLHSIQLKDSVLNIVH--VQGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTV-TLG-LPHHSVRSL 89 (121)
Q Consensus 15 g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~--~~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i-~lg-~~~~pV~~m 89 (121)
+.|.++++....++.+..-.+ .....|.. ..++||++-+. +.|.++..+ | ...+.+ .-+ .-+.|+ .|
T Consensus 537 ~~I~~~~~dG~~~~~lv~~~l-~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d--G----~~~~~v~~~~~~l~~P~-gl 608 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLHSISSIDVN--G----GNRKTILEDEKRLAHPF-SL 608 (791)
T ss_dssp CEEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETT--S----CSCEEEEECTTTTSSEE-EE
T ss_pred CeEEEEecCCCceEEEEeCCC-CCceEEEEecCCCeEEEEeCCCCcEEEEecC--C----CceEEEecCCCccCCCC-EE
Confidence 567776665532222211111 23444554 47899999654 557777432 2 122333 221 113565 77
Q ss_pred eeeCCEEEEEeC--CeEEEEeCCCCcEEEEE
Q psy16019 90 AAVYNKVWCGYK--NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 90 ~~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~ 118 (121)
++.++.||.+.. ++|+.+|..+++..+.+
T Consensus 609 av~~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 609 AVFEDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEeCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 888899988766 68999998887655544
No 306
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=61.86 E-value=26 Score=27.53 Aligned_cols=57 Identities=7% Similarity=0.064 Sum_probs=41.1
Q ss_pred eEEEEECCcccceeeeeEecCCC-------EEEEEEe---------CCEEEEEec-CCcEEEEEcCCCCCCCCC
Q psy16019 16 SVFVHSAVSQWRRCLHSIQLKDS-------VLNIVHV---------QGRVVCALA-DGSVAIFRRGPDGQWDLS 72 (121)
Q Consensus 16 ~I~v~~~~~~~~~~l~~~~l~~~-------V~~i~~~---------~~~v~v~La-nG~l~Vy~r~~~g~wd~~ 72 (121)
+|.+|++...-.+.++++.+|+. ..+|... +..+|++-+ .+-|.||+...+..|-+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 78999998831177888888742 3455554 567898885 567999998887777554
No 307
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=61.03 E-value=39 Score=27.15 Aligned_cols=61 Identities=11% Similarity=0.102 Sum_probs=40.2
Q ss_pred EEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCCCCceeE-eeeeCCEEEEEeCCeEEEEeC
Q psy16019 48 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRS-LAAVYNKVWCGYKNKIHVVDP 109 (121)
Q Consensus 48 ~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~-m~~v~~~lw~~~gn~I~Vi~~ 109 (121)
-+|+|..||.|.=.....++.. ......+.+.+...||.. |...++.|+++.+++|.=+..
T Consensus 420 V~FlGT~~G~l~Kv~~~~~~~~-~~~~~~~~~~~~~~pi~~~l~~~~~~Lyv~s~~~V~~vpv 481 (527)
T 4fww_A 420 VAHMGTMDGRILQVELVRSLNY-LLYVSNFSLGDSGQPVQRDVSRLGDHLLFASGDQVFQVPI 481 (527)
T ss_dssp EEEEEETTSEEEEEECSCCSSC-CCEEEEEEETTSCCCBCSCCEEETTEEEEEETTEEEEEET
T ss_pred EEEEECCCCeEEEEEEcCCCCc-ceEEEEEEecCCCceeehhcccCCCEEEEEECCEEEEEec
Confidence 4999999999766544333311 111123566655688865 555578999999999987743
No 308
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=61.00 E-value=43 Score=24.03 Aligned_cols=94 Identities=7% Similarity=-0.079 Sum_probs=49.3
Q ss_pred cCCeEEEEECCcccceeeeeEecCCCEEEEEEeC--CE-EEEEecC------CcEEEEEcCCCCCCCCCCceEEEeCC--
Q psy16019 13 QNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ--GR-VVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGL-- 81 (121)
Q Consensus 13 ~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~--~~-v~v~Lan------G~l~Vy~r~~~g~wd~~~~~~i~lg~-- 81 (121)
.+..|++++.... +.......+..+..+.+.. +. ++....+ ..|.+++. +......+..
T Consensus 166 ~~~~l~~~d~~~g--~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~--------~~~~~~~l~~~~ 235 (396)
T 3c5m_A 166 PTCRLIKVDIETG--ELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNE--------DGSNVRKIKEHA 235 (396)
T ss_dssp CCEEEEEEETTTC--CEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEET--------TSCCCEESSCCC
T ss_pred CcceEEEEECCCC--cEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEEC--------CCCceeEeeccC
Confidence 4568899997762 3222224456677777765 33 3222222 24555533 2222222222
Q ss_pred CCCceeEeeee--CCEEEEE-eC---Ce--EEEEeCCCCcEEE
Q psy16019 82 PHHSVRSLAAV--YNKVWCG-YK---NK--IHVVDPKSLDVIR 116 (121)
Q Consensus 82 ~~~pV~~m~~v--~~~lw~~-~g---n~--I~Vi~~~tl~i~~ 116 (121)
+...+..+... ++.|+++ .. .. |+++|..+.+.+.
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE 278 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE
Confidence 12345555555 4556554 32 24 9999999987654
No 309
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=60.47 E-value=76 Score=26.72 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=54.0
Q ss_pred CCeEEEEecCCeEEEEE-CCcccceeeeeEe----cCCCEEEEEEeC---CEEEEEecCCc----EEEEEcC-CCCCCCC
Q psy16019 5 LPTMWLGSQNGSVFVHS-AVSQWRRCLHSIQ----LKDSVLNIVHVQ---GRVVCALADGS----VAIFRRG-PDGQWDL 71 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~-~~~~~~~~l~~~~----l~~~V~~i~~~~---~~v~v~LanG~----l~Vy~r~-~~g~wd~ 71 (121)
.+++|+|++.|.|+.-. --..|++....+. -...|.+|.... +.+|++..... -.||+-. .+..|.
T Consensus 27 ~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~- 105 (789)
T 1sqj_A 27 KDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFT- 105 (789)
T ss_dssp TTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEE-
T ss_pred CCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcce-
Confidence 56899999999887654 3334544221111 013688888754 68999986533 4455443 334575
Q ss_pred CCceEEEeCC------CC-CceeEeeee---CCEEEEEeC-CeEE
Q psy16019 72 SKYHTVTLGL------PH-HSVRSLAAV---YNKVWCGYK-NKIH 105 (121)
Q Consensus 72 ~~~~~i~lg~------~~-~pV~~m~~v---~~~lw~~~g-n~I~ 105 (121)
.+.++. +. ..+.+|++. .+.+|++.. +.|+
T Consensus 106 ----~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~ 146 (789)
T 1sqj_A 106 ----IYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW 146 (789)
T ss_dssp ----EEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE
T ss_pred ----eccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE
Confidence 222221 11 134566665 378899873 4444
No 310
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=59.29 E-value=70 Score=25.91 Aligned_cols=111 Identities=8% Similarity=-0.020 Sum_probs=57.5
Q ss_pred CCeEEEEec-----CCeEEEEECCc------ccceeeeeEecC-CCEEE-EEEeCCEEEEEecC----CcEEEEEcCCCC
Q psy16019 5 LPTMWLGSQ-----NGSVFVHSAVS------QWRRCLHSIQLK-DSVLN-IVHVQGRVVCALAD----GSVAIFRRGPDG 67 (121)
Q Consensus 5 ~~tvwiGt~-----~g~I~v~~~~~------~~~~~l~~~~l~-~~V~~-i~~~~~~v~v~Lan----G~l~Vy~r~~~g 67 (121)
...+.++.. +..|+++++.+ . +.....+.-+ +.+.. +...++++|+.... +.|.+++....+
T Consensus 244 g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 244 GRYVLLSIREGCDPVNRLWYCDLQQESNGITG-ILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS-SCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CCEEEEEEEccCCCccEEEEEECcccccccCC-ccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 344555443 45788887654 1 1123333322 33333 33445566655432 346666433211
Q ss_pred CCCCCCceEEEeCCCCCceeEeeee-CCEEEEEeC----CeEEEEeCCCCcEEEEEE
Q psy16019 68 QWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK----NKIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 68 ~wd~~~~~~i~lg~~~~pV~~m~~v-~~~lw~~~g----n~I~Vi~~~tl~i~~~~~ 119 (121)
....+.+.-..+...+..+... ++.+.+... .+|++++..+++..+.+.
T Consensus 323 ---~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 323 ---ESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp ---GGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred ---cccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence 0012344333322367778777 777776654 269999987777655553
No 311
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=58.38 E-value=59 Score=24.74 Aligned_cols=61 Identities=11% Similarity=0.055 Sum_probs=42.5
Q ss_pred EEEEecCCeEEEEECCcccc-------e---eeeeEe-cCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCC
Q psy16019 8 MWLGSQNGSVFVHSAVSQWR-------R---CLHSIQ-LKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQ 68 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~~-------~---~l~~~~-l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~ 68 (121)
..+=+++|.+|.|...+.-+ . .-..++ +++.|.+|..-.+..++-..||.|..|-++..|.
T Consensus 306 t~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~~Gq 377 (423)
T 3mvd_K 306 TVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQ 377 (423)
T ss_dssp EEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCTTSC
T ss_pred EEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCCCCC
Confidence 34447899999998655310 1 111222 2247889999898989989999999998887664
No 312
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=58.03 E-value=18 Score=29.66 Aligned_cols=39 Identities=18% Similarity=0.218 Sum_probs=31.0
Q ss_pred eCCCCCceeEeeeeC--CEEEEEeCCeEEEEeCCCCcEEEEE
Q psy16019 79 LGLPHHSVRSLAAVY--NKVWCGYKNKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 79 lg~~~~pV~~m~~v~--~~lw~~~gn~I~Vi~~~tl~i~~~~ 118 (121)
+-.+..++..|++.+ ++|++|..|.|+.+++ +++++...
T Consensus 12 f~~~~t~~~~l~~d~~~g~lyVGA~N~ly~Ls~-~L~~~~~~ 52 (528)
T 3ol2_B 12 FTPNGTYLQHLARDPTSGTLYLGATNFLFQLSP-GLQLEATV 52 (528)
T ss_dssp ECCTTCCEEEEEECTTTCCEEEEETTEEEEECT-TCCEEEEE
T ss_pred cccCCCCeEEEEEcCCCCEEEEEEEeeEEEcCC-CcccceEe
Confidence 333446899988874 7999999999999996 88877654
No 313
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=57.25 E-value=54 Score=24.00 Aligned_cols=60 Identities=10% Similarity=0.157 Sum_probs=38.5
Q ss_pred CCEEEEEEe-CCEEEEEecCCcEEEEEcC-CCCCCCCCCceEEEeCCCCCceeEeeeeCCEEEEEeC
Q psy16019 37 DSVLNIVHV-QGRVVCALADGSVAIFRRG-PDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK 101 (121)
Q Consensus 37 ~~V~~i~~~-~~~v~v~LanG~l~Vy~r~-~~g~wd~~~~~~i~lg~~~~pV~~m~~v~~~lw~~~g 101 (121)
..+.+|.+. .+.+|++..+|.| |+.. .+..|...... ...+..++..|...++++|++..
T Consensus 36 ~~~~~v~~~~~~~~~~~G~~g~i--~~s~DgG~tW~~~~~~---~~~~~~~~~~i~~~~~~~~~~g~ 97 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVGVNATL--METRDGGQTWEPRTLV---LDHSDYRFNSVSFQGNEGWIVGE 97 (327)
T ss_dssp SCEEEEEESSSSCEEEEETTTEE--EEESSTTSSCEECCCC---CSCCCCEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEECCCCcEEEEcCCCeE--EEeCCCCCCCeECCCC---CCCCCccEEEEEecCCeEEEEEC
Confidence 578899885 4678888888864 4433 33357533211 12234688888888888888643
No 314
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=56.97 E-value=54 Score=23.89 Aligned_cols=58 Identities=19% Similarity=0.199 Sum_probs=39.6
Q ss_pred CeEEEEecCCeEEEEECCcccceeee-eEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCC
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLH-SIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQ 68 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~-~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~ 68 (121)
.++.+ + ||.+|.+...+. -.+. ..+++..|.+|..-.+..++=. ||.|..|-++..|.
T Consensus 74 hs~~l-~-~G~v~~wG~n~~--Gqlg~P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gq 132 (282)
T 3qhy_B 74 HSLAL-K-DGEVIAWGGNED--GQTTVPAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQ 132 (282)
T ss_dssp EEEEE-E-TTEEEEEECCTT--STTCCCGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTST
T ss_pred EEEEE-E-CCEEEEeeCCCC--CCCCCCcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCc
Confidence 45666 5 899998887663 1111 1123457888888888777777 99999998877664
No 315
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=56.93 E-value=51 Score=27.00 Aligned_cols=60 Identities=17% Similarity=0.215 Sum_probs=40.8
Q ss_pred EEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCCCCce-eEeeee--CCEEEEEeCCeEEEEeCC
Q psy16019 48 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAV--YNKVWCGYKNKIHVVDPK 110 (121)
Q Consensus 48 ~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV-~~m~~v--~~~lw~~~gn~I~Vi~~~ 110 (121)
-+|+|..+|.|.=.....++ ...-...+.+ .+..|| +.|.+. ...|+++.+.+|.=+...
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~--~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vpl~ 464 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGS--DGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKVPVA 464 (528)
T ss_dssp EEEEEETTSEEEEEECSSSC--CSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEEESC
T ss_pred EEEEECCCCeEEEEEEcCCC--CeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEEEhh
Confidence 58999999998744333221 1223455777 445899 588875 578999999888766544
No 316
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=56.43 E-value=78 Score=25.60 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=57.8
Q ss_pred CCeEEEEecC----CeEEEEECCcccceeeeeEe-cCC--CEEEEEEe-CCE-EEEEecCCcEEEEEcCC-CCCCCCCCc
Q psy16019 5 LPTMWLGSQN----GSVFVHSAVSQWRRCLHSIQ-LKD--SVLNIVHV-QGR-VVCALADGSVAIFRRGP-DGQWDLSKY 74 (121)
Q Consensus 5 ~~tvwiGt~~----g~I~v~~~~~~~~~~l~~~~-l~~--~V~~i~~~-~~~-v~v~LanG~l~Vy~r~~-~g~wd~~~~ 74 (121)
...+++.++. +.|++++.........+.+. ..+ .+.++... +++ ++.+..||...+|..+. +|. ..
T Consensus 297 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~----~~ 372 (710)
T 2xdw_A 297 GTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA----LL 372 (710)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC----EE
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC----EE
Confidence 4566666653 36999987663211223332 212 56667776 554 55666778655543221 121 12
Q ss_pred eEEEeCCCCCceeEeeee--CCEEEEEeC-----CeEEEEeCCCCc
Q psy16019 75 HTVTLGLPHHSVRSLAAV--YNKVWCGYK-----NKIHVVDPKSLD 113 (121)
Q Consensus 75 ~~i~lg~~~~pV~~m~~v--~~~lw~~~g-----n~I~Vi~~~tl~ 113 (121)
+.+.+. ...|..+... ++++++++. ..|+.+|..+.+
T Consensus 373 ~~l~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 373 KIFPLE--VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEECCC--SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EecCCC--CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 334433 3566666554 468887655 379999998876
No 317
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=55.47 E-value=67 Score=26.77 Aligned_cols=62 Identities=5% Similarity=0.084 Sum_probs=39.7
Q ss_pred EEEEEecCCcEEEEEcCCCCCCCCCCceEEEeC--CCCCceeEeeeeC--CEEEEEeCCeEEEEeCC
Q psy16019 48 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG--LPHHSVRSLAAVY--NKVWCGYKNKIHVVDPK 110 (121)
Q Consensus 48 ~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg--~~~~pV~~m~~v~--~~lw~~~gn~I~Vi~~~ 110 (121)
-+|+|..+|.|.=.-...++.. .....+..+. .++.||+.|.+.. ..|+++.+.+|.=+...
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~-~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVPl~ 447 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEH-SFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLD 447 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTT-CCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEETT
T ss_pred EEEEEcCCcEEEEEEecCCCCc-ceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcchh
Confidence 5899999999874433322211 1122222332 2358999999874 78999999988766543
No 318
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=54.64 E-value=72 Score=24.60 Aligned_cols=98 Identities=11% Similarity=0.003 Sum_probs=50.9
Q ss_pred CCCeEEEEecC-----CeEEEEECCcccc--eeeeeEecCCCEEEEEEe--CCEEEEEe-cCCcEEEEEcCCCCCCCCCC
Q psy16019 4 VLPTMWLGSQN-----GSVFVHSAVSQWR--RCLHSIQLKDSVLNIVHV--QGRVVCAL-ADGSVAIFRRGPDGQWDLSK 73 (121)
Q Consensus 4 ~~~tvwiGt~~-----g~I~v~~~~~~~~--~~l~~~~l~~~V~~i~~~--~~~v~v~L-anG~l~Vy~r~~~g~wd~~~ 73 (121)
..++||+.... ..+++++...... +.+..+..|. .+... ++.+|++- .++.|.+|...... .
T Consensus 189 ~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~---giavdp~~g~lyv~d~~~~~V~~~~~~~~~-----~ 260 (430)
T 3tc9_A 189 EADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCN---GAETHPINGELYFNSWNAGQVFRYDFTTQE-----T 260 (430)
T ss_dssp TSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCC---CEEECTTTCCEEEEETTTTEEEEEETTTTE-----E
T ss_pred CCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCce---EEEEeCCCCEEEEEECCCCEEEEEECCCCc-----E
Confidence 34456666542 1455555444332 2222333333 33444 56788875 66888888543110 0
Q ss_pred ceEEEeCCCCCceeEeeee--CCEEEEEeC--CeEEEEeCC
Q psy16019 74 YHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK 110 (121)
Q Consensus 74 ~~~i~lg~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~ 110 (121)
..+..++....| +.|++. ++.||++.. ++|++++.+
T Consensus 261 ~~~~~~~~~~~P-~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 261 TPLFTIQDSGWE-FHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEECSSSSCC-EEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCcc-eeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 022344432223 355555 466888865 689998754
No 319
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=53.82 E-value=24 Score=29.89 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=30.4
Q ss_pred CCCceeEeeeeC--CEEEEEeCCeEEEEeCCCCcEEEEE
Q psy16019 82 PHHSVRSLAAVY--NKVWCGYKNKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 82 ~~~pV~~m~~v~--~~lw~~~gn~I~Vi~~~tl~i~~~~ 118 (121)
+..|+.-|++.+ ++||+|.-|+||.+++ +|+++.+.
T Consensus 15 ~~t~~~hl~~d~~tg~vYvGavN~lyqL~~-~L~~~~~~ 52 (681)
T 3oky_A 15 RDWTFNHLTVHRRTGAVYVGAINRVYKLTG-NLTIQVAH 52 (681)
T ss_dssp TTSCEEEEEECTTTCCEEEEETTEEEEECT-TCCEEEEE
T ss_pred CCCceEEEEEcCCCCcEEEeEEEEEEEcCc-ccceeeeE
Confidence 346899888774 7999999999999987 89888764
No 320
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=53.73 E-value=61 Score=23.54 Aligned_cols=95 Identities=6% Similarity=-0.037 Sum_probs=49.1
Q ss_pred CeEEEEECCcc-cceeeeeEecCCCE-EEEEEeCCEEEEEec-------CCcEEEEEcC-CCCCCCCCCceEEEeCCCCC
Q psy16019 15 GSVFVHSAVSQ-WRRCLHSIQLKDSV-LNIVHVQGRVVCALA-------DGSVAIFRRG-PDGQWDLSKYHTVTLGLPHH 84 (121)
Q Consensus 15 g~I~v~~~~~~-~~~~l~~~~l~~~V-~~i~~~~~~v~v~La-------nG~l~Vy~r~-~~g~wd~~~~~~i~lg~~~~ 84 (121)
..+++|+.... |++ +..+..+..- .+....++++|+-.+ ...+.+|.-+ ....|..-.+ +..| .
T Consensus 168 ~~v~~yd~~~~~W~~-~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~----~~~~-~ 241 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSY-AGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP----VSSP-D 241 (357)
T ss_dssp CEEEEEETTTTEEEE-EEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC----SSTT-T
T ss_pred ccEEEEeCCCCcEEE-CCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC----CCCC-c
Confidence 58999998763 332 3333322222 455666888887654 3456667532 2234532111 1111 1
Q ss_pred c--eeEeeeeCCEEEEEeC------------------------CeEEEEeCCCCcEE
Q psy16019 85 S--VRSLAAVYNKVWCGYK------------------------NKIHVVDPKSLDVI 115 (121)
Q Consensus 85 p--V~~m~~v~~~lw~~~g------------------------n~I~Vi~~~tl~i~ 115 (121)
+ -.++...+++|++--| +.+.++|+++.+-+
T Consensus 242 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~ 298 (357)
T 2uvk_A 242 GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD 298 (357)
T ss_dssp CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE
T ss_pred ccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee
Confidence 1 1236777899988555 35888998876543
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=53.59 E-value=80 Score=24.86 Aligned_cols=41 Identities=7% Similarity=0.072 Sum_probs=30.9
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeC
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQ 46 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~ 46 (121)
+.++-+-+=. ...|+|||++. |+++++..++..|.-.++..
T Consensus 76 P~~~ViALra-g~~LQiFnlet--K~klks~~~~e~VvfWkWis 116 (365)
T 2xzh_A 76 PASKVIALKA-GKTLQIFNIEM--KSKMKAHTMTDDVTFWKWIS 116 (365)
T ss_dssp SSSSEEEEEE-TTEEEEEETTT--TEEEEEEECSSCEEEEEECS
T ss_pred CCccEEEEec-CCeEEEechHH--hhhhcceecCCccEEEEecC
Confidence 3444444444 46899999998 78899999999888877653
No 322
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=53.36 E-value=75 Score=24.48 Aligned_cols=73 Identities=8% Similarity=0.142 Sum_probs=44.9
Q ss_pred EEEEEeC--CEEEEEe-cCCcEEEEEcCCCCCCCCCCceEEEe------CCCCCceeEeee----eCCEEEEE-e-----
Q psy16019 40 LNIVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTL------GLPHHSVRSLAA----VYNKVWCG-Y----- 100 (121)
Q Consensus 40 ~~i~~~~--~~v~v~L-anG~l~Vy~r~~~g~wd~~~~~~i~l------g~~~~pV~~m~~----v~~~lw~~-~----- 100 (121)
-++.++. +++|++. .+|+|.+|+...+.. ..+.+ |++...+..|.. -.++||+. .
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~------~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH------FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCE------EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeE------EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3567775 8888887 799999994432111 11222 222223456666 24789983 3
Q ss_pred ---------CCeEEEEeCC---CCcEEEEE
Q psy16019 101 ---------KNKIHVVDPK---SLDVIRPV 118 (121)
Q Consensus 101 ---------gn~I~Vi~~~---tl~i~~~~ 118 (121)
.+.++.+|+. |.+.....
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~ 119 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSV 119 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEE
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEe
Confidence 2679999998 77766544
No 323
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=52.60 E-value=94 Score=25.34 Aligned_cols=60 Identities=5% Similarity=-0.037 Sum_probs=35.8
Q ss_pred CCCCCeEEEEecC---------CeEEEEECCcccceeeeeEecCCCEEEEEEeCC-EEEEEecCCcEEEEEc
Q psy16019 2 TSVLPTMWLGSQN---------GSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQG-RVVCALADGSVAIFRR 63 (121)
Q Consensus 2 ~~~~~tvwiGt~~---------g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~-~v~v~LanG~l~Vy~r 63 (121)
|.....|..++++ |.+++|+... .+...-...++.+....++.+ +-.|-..|++|.+++.
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~--~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~ 139 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNK--RQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIE 139 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESS
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCC--CcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEEC
Confidence 4556678888875 6778999887 332221134567777777642 2222235777777643
No 324
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=51.56 E-value=95 Score=25.10 Aligned_cols=63 Identities=14% Similarity=0.117 Sum_probs=35.0
Q ss_pred eCCEEEEEec--CCcEEEEEcCCCCCCCCCCceEEEeCCCCCce--eEeeee-CCEEEEEeC--------CeEEEEeCCC
Q psy16019 45 VQGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RSLAAV-YNKVWCGYK--------NKIHVVDPKS 111 (121)
Q Consensus 45 ~~~~v~v~La--nG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV--~~m~~v-~~~lw~~~g--------n~I~Vi~~~t 111 (121)
.++++|+..+ ++++.+|.... +.|. .+...+.|- .++... +++|++--| +.+.++|+.+
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t-~~W~-------~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSS-DSWI-------PGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGG-TEEE-------ECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred CCCCEEEeCCCCCCceEEecCcC-Ccee-------ECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 4566777665 34577774432 2342 232211111 134455 788887555 5799999988
Q ss_pred CcEE
Q psy16019 112 LDVI 115 (121)
Q Consensus 112 l~i~ 115 (121)
.+-+
T Consensus 324 ~~W~ 327 (656)
T 1k3i_A 324 KTWT 327 (656)
T ss_dssp TEEE
T ss_pred Ccce
Confidence 7644
No 325
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=50.49 E-value=1e+02 Score=25.15 Aligned_cols=106 Identities=13% Similarity=0.170 Sum_probs=58.7
Q ss_pred CCCeEEEEec----CCeEEEEECCcccceeeeeE-ecC-CCEEEEEEeCCE-EEEEecCCcEEEEEcCCCCCCCCCCceE
Q psy16019 4 VLPTMWLGSQ----NGSVFVHSAVSQWRRCLHSI-QLK-DSVLNIVHVQGR-VVCALADGSVAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 4 ~~~tvwiGt~----~g~I~v~~~~~~~~~~l~~~-~l~-~~V~~i~~~~~~-v~v~LanG~l~Vy~r~~~g~wd~~~~~~ 76 (121)
....+++.++ ++.|++++..... .....+ ... +.+.++...+++ ++.+..||..-+|..+.+|. ..+.
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~----~~~~ 400 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGK----PAGA 400 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSC----EEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC----ceee
Confidence 3456777776 4568998876521 111222 222 345456655555 56667788766665432221 1223
Q ss_pred EEeCCCCCceeEeeee--CCEEEEEeC-----CeEEEEeCCCCcEE
Q psy16019 77 VTLGLPHHSVRSLAAV--YNKVWCGYK-----NKIHVVDPKSLDVI 115 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v--~~~lw~~~g-----n~I~Vi~~~tl~i~ 115 (121)
+.+.. ...|..+... ++.|++.+. ..|+.+|..+.+.+
T Consensus 401 l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 401 VSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp CBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred ccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 33321 2455555543 467876654 47999999887643
No 326
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=49.25 E-value=1.1e+02 Score=24.96 Aligned_cols=104 Identities=18% Similarity=0.245 Sum_probs=53.9
Q ss_pred CCeEEEEec----CCeEEEEECCcccceeeeeE-ecCCCEEEEEEeCCEEE-EEecCCc--EEEEEcCCCCCCCCCCceE
Q psy16019 5 LPTMWLGSQ----NGSVFVHSAVSQWRRCLHSI-QLKDSVLNIVHVQGRVV-CALADGS--VAIFRRGPDGQWDLSKYHT 76 (121)
Q Consensus 5 ~~tvwiGt~----~g~I~v~~~~~~~~~~l~~~-~l~~~V~~i~~~~~~v~-v~LanG~--l~Vy~r~~~g~wd~~~~~~ 76 (121)
.+.+++-|+ .+.|+++++.....+..+.+ ..++.++.+...++.++ ....||. |.+++. +|. ..+.
T Consensus 291 g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~--~g~----~~~~ 364 (693)
T 3iuj_A 291 GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDY--EGK----RVRE 364 (693)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECT--TSC----EEEE
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEEC--CCC----eeEE
Confidence 345555554 35788888765322112222 22333336666666554 4455664 555522 121 1123
Q ss_pred EEeCCCCCceeEeeee--CCEEEEEeC-----CeEEEEeCCCCcEE
Q psy16019 77 VTLGLPHHSVRSLAAV--YNKVWCGYK-----NKIHVVDPKSLDVI 115 (121)
Q Consensus 77 i~lg~~~~pV~~m~~v--~~~lw~~~g-----n~I~Vi~~~tl~i~ 115 (121)
+.+.. ...+..+... ++++++.+. ..|+.+|..+.+.+
T Consensus 365 l~~p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 365 VALPG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp ECCSS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred eecCC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 33322 1234444333 577887765 58999999887654
No 327
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=48.87 E-value=58 Score=27.56 Aligned_cols=62 Identities=13% Similarity=0.114 Sum_probs=40.1
Q ss_pred EEEEEecCCcEEEEEcCCCCCCCCCCceEEEeCCCCCce-eEeeeeC--CEEEEEeCCeEEEEeCC
Q psy16019 48 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVY--NKVWCGYKNKIHVVDPK 110 (121)
Q Consensus 48 ~v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV-~~m~~v~--~~lw~~~gn~I~Vi~~~ 110 (121)
-+|+|..+|.|.=...... .+...-+..+.+..++.|| +.|.+.. ..|+++.+.+|.=+...
T Consensus 414 VlFLGT~~G~l~Kv~~~~~-~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qvPl~ 478 (681)
T 3oky_A 414 VVFVGTKSGKLKKIRADGP-PHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVPVE 478 (681)
T ss_dssp EEEEEBTTSEEEEEECCCT-TTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEESC
T ss_pred EEEEECCCceEEEEEECCC-CCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEEEhh
Confidence 4899999999875433221 1111112235566456898 7888875 68999999988766543
No 328
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=48.08 E-value=87 Score=23.63 Aligned_cols=58 Identities=24% Similarity=0.389 Sum_probs=40.7
Q ss_pred EecCCeEEEEECCcccc------e-ee--eeEe-cC-CCEEEEEEeCCEEEEEecCCcEEEEEcCCCCC
Q psy16019 11 GSQNGSVFVHSAVSQWR------R-CL--HSIQ-LK-DSVLNIVHVQGRVVCALADGSVAIFRRGPDGQ 68 (121)
Q Consensus 11 Gt~~g~I~v~~~~~~~~------~-~l--~~~~-l~-~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~ 68 (121)
=+++|.+|.|...+.-+ . .. ..+. ++ ..|.+|..-....++-..||.|..|-++..|+
T Consensus 280 lt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~Gq 348 (389)
T 3kci_A 280 LTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 348 (389)
T ss_dssp EETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCTTST
T ss_pred EeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCCCCc
Confidence 37899999998765211 1 11 1121 22 36889988888888889999999998887664
No 329
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=47.74 E-value=1.1e+02 Score=24.70 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=56.1
Q ss_pred EEEEec----CCeEEEEECCcccceeeeeEe--cC-CCEEEEEEeCCE-EEEEecCCcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 8 MWLGSQ----NGSVFVHSAVSQWRRCLHSIQ--LK-DSVLNIVHVQGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 8 vwiGt~----~g~I~v~~~~~~~~~~l~~~~--l~-~~V~~i~~~~~~-v~v~LanG~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
+++.++ ++.|++++...........+. .+ ..+..+...+++ ++.+..||..-++....+|. ..+.+.+
T Consensus 284 l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~----~~~~l~~ 359 (695)
T 2bkl_A 284 FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGK----PVRTVQL 359 (695)
T ss_dssp EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCC----EEEECCC
T ss_pred EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC----eeEEecC
Confidence 566664 578888887653211112221 12 246666666665 45556778766665432221 1222333
Q ss_pred CCCCCceeEeeee--CCEEEEEeC-----CeEEEEeCCCCcEE
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK-----NKIHVVDPKSLDVI 115 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g-----n~I~Vi~~~tl~i~ 115 (121)
.. ...|..+... ++++++.+. ..|+.+|..+.+.+
T Consensus 360 ~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 360 PG-VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp SS-SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred CC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 21 2345554443 467887665 47999999887754
No 330
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=47.19 E-value=54 Score=26.79 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=28.4
Q ss_pred CceeEeeee--CCEEEEEeCCeEEEEeCCCCcEEEEE
Q psy16019 84 HSVRSLAAV--YNKVWCGYKNKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 84 ~pV~~m~~v--~~~lw~~~gn~I~Vi~~~tl~i~~~~ 118 (121)
.++..|++. .+.|++|..|.|+.+++ +|+++...
T Consensus 18 ~~~~~l~~d~~~g~lyvGA~n~ly~Ls~-~L~~~~~~ 53 (539)
T 3al9_A 18 WTFNHLTVHRRTGAVYVGAINRVYKLTG-NLTIQVAH 53 (539)
T ss_dssp SCEEEEEECTTTCCEEEEETTEEEEECT-TCCEEEEE
T ss_pred ccEEEEEEeCCCCEEEEEEeeeEEECCC-Cccccccc
Confidence 458888888 58999999999999995 88876653
No 331
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=46.95 E-value=77 Score=22.73 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=20.2
Q ss_pred ceeEeeee--CCEE-EEEeC--C---eEEEEeCCCCcEEE
Q psy16019 85 SVRSLAAV--YNKV-WCGYK--N---KIHVVDPKSLDVIR 116 (121)
Q Consensus 85 pV~~m~~v--~~~l-w~~~g--n---~I~Vi~~~tl~i~~ 116 (121)
++...... ++.| +.+.. + .|+++|.++++.+.
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ 278 (388)
T ss_dssp EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE
T ss_pred ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE
Confidence 45554444 4656 44543 2 39999999988654
No 332
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=44.11 E-value=93 Score=22.88 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=53.2
Q ss_pred EEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec--CCcEEEEEcCCCCCCCCCCceEEEeCCCC
Q psy16019 8 MWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVTLGLPH 83 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La--nG~l~Vy~r~~~g~wd~~~~~~i~lg~~~ 83 (121)
.|.-...+.|.+++.....++.+..-.+ .....|... .+.+|++-. ++.|..+.. +|. ....+--..-.
T Consensus 94 y~~d~~~~~I~~~~~dG~~~~~l~~~~~-~~P~giavdp~~g~ly~td~~~~~~I~r~~~--dG~----~~~~~~~~~l~ 166 (318)
T 3sov_A 94 YWTDSETNRIEVSNLDGSLRKVLFWQEL-DQPRAIALDPSSGFMYWTDWGEVPKIERAGM--DGS----SRFIIINSEIY 166 (318)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECSSC-SSEEEEEEEGGGTEEEEEECSSSCEEEEEET--TSC----SCEEEECSSCS
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCCC-CCccEEEEeCCCCEEEEEecCCCCEEEEEEc--CCC----CeEEEEECCCC
Confidence 3445567788888876633332211011 344566665 578999873 566766643 231 12222111111
Q ss_pred CceeEeeee--CCEEEEEeC--CeEEEEeCCCCc
Q psy16019 84 HSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLD 113 (121)
Q Consensus 84 ~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~ 113 (121)
.| .-|++. ++.||.+.. ++|..+|.+...
T Consensus 167 ~P-nglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 167 WP-NGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp CE-EEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred Cc-cEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 23 345555 688888775 689999876533
No 333
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=43.59 E-value=1.3e+02 Score=24.34 Aligned_cols=59 Identities=25% Similarity=0.428 Sum_probs=39.7
Q ss_pred EEEEEecCCcEEEEEcCCC--CCCCCCCc---------eEEEeCCCCCceeEeeeeC---CEEEEEeCCeEEEEeC
Q psy16019 48 RVVCALADGSVAIFRRGPD--GQWDLSKY---------HTVTLGLPHHSVRSLAAVY---NKVWCGYKNKIHVVDP 109 (121)
Q Consensus 48 ~v~v~LanG~l~Vy~r~~~--g~wd~~~~---------~~i~lg~~~~pV~~m~~v~---~~lw~~~gn~I~Vi~~ 109 (121)
-+.++-.||+|.+.-...+ +.||.+++ ..++++. -+..+.... +++.|..-+.++.+|.
T Consensus 314 ll~i~f~dG~v~~l~~d~e~~msW~~~~~~~~nSl~lvE~i~l~~---~~~~~~~~~~~~g~~~v~~~~~v~~vd~ 386 (452)
T 3pbp_A 314 IVCVSFDDGSLILLFKDLEMSMSWDVDNYVYNNSLVLIERVKLQR---EIKSLITLPEQLGKLYVISDNIIQQVNF 386 (452)
T ss_dssp EEEEEETTTEEEEEEECSCCCCCSSCTTBCSSCEEEEEEEEECCS---CCCEEECCTTSTTEEEEECSSEEEEEEC
T ss_pred EEEEEecCCEEEEEecCCcccceeeccCCCCCCeEEEEEEEEccc---chhheeecCCCCceEEEeecCceEEEec
Confidence 4556777999888766533 68998777 3467744 444454443 5888866688888865
No 334
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=43.31 E-value=88 Score=22.33 Aligned_cols=26 Identities=12% Similarity=-0.077 Sum_probs=16.5
Q ss_pred eeeCCEEEEEeC----CeEEEEeCCCCcEE
Q psy16019 90 AAVYNKVWCGYK----NKIHVVDPKSLDVI 115 (121)
Q Consensus 90 ~~v~~~lw~~~g----n~I~Vi~~~tl~i~ 115 (121)
.+.++.|+.+.. ..|+.++..+.+..
T Consensus 359 s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 359 TPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred ccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 334567766553 37999998776544
No 335
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=38.34 E-value=1.6e+02 Score=24.04 Aligned_cols=95 Identities=14% Similarity=0.029 Sum_probs=55.2
Q ss_pred eEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEecC-CcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEeeee
Q psy16019 16 SVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV 92 (121)
Q Consensus 16 ~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~Lan-G~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m~~v 92 (121)
+|+.++.....++.+-+-.+. ....|... .+++|++-+. +.|..+.. +| ...+++.-+....| ..|++.
T Consensus 457 ~I~r~~~dG~~~~~l~~~~l~-~P~gla~D~~~~~LYw~D~~~~~I~~~~~--dG----~~r~~~~~~~~~~P-~glav~ 528 (628)
T 4a0p_A 457 KIERAALDGTEREVLFFSGLS-KPIALALDSRLGKLFWADSDLRRIESSDL--SG----ANRIVLEDSNILQP-VGLTVF 528 (628)
T ss_dssp EEEEEETTSCSCEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEET--TS----CSCEEEECSSCSCE-EEEEEE
T ss_pred eEEEEeCCCCCcEEEEeccCC-CccEEEEeCCCCEEEEEeCCCCEEEEEeC--CC----CceEEEEcCCCCCc-EEEEEE
Confidence 566665554323322211121 22344444 6799999774 77777754 23 22344432323345 478888
Q ss_pred CCEEEEEeC--CeEEEEeCCCCcEEEEE
Q psy16019 93 YNKVWCGYK--NKIHVVDPKSLDVIRPV 118 (121)
Q Consensus 93 ~~~lw~~~g--n~I~Vi~~~tl~i~~~~ 118 (121)
++.||.+.. ++|..+|..|++-.+.+
T Consensus 529 ~~~ly~tD~~~~~i~~~~k~~G~~~~~i 556 (628)
T 4a0p_A 529 ENWLYWIDKQQQMIEKIDMTGREGRTKV 556 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSCCEEE
T ss_pred CCEEEEEECCCCeEEEEECcCCCCcEEE
Confidence 999988776 58999999987754443
No 336
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=37.44 E-value=1.4e+02 Score=24.38 Aligned_cols=40 Identities=8% Similarity=0.072 Sum_probs=29.9
Q ss_pred CCCCeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe
Q psy16019 3 SVLPTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV 45 (121)
Q Consensus 3 ~~~~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~ 45 (121)
+.++-+-+=. ...|+||+++. |+++++..++..|.-.++.
T Consensus 75 P~~~iiALra-g~~lQiFnle~--K~klks~~~~e~VvfWkWi 114 (494)
T 1bpo_A 75 PASKVIALKA-GKTLQIFNIEM--KSKMKAHTMTDDVTFWKWI 114 (494)
T ss_dssp SSSSCEEEEE-TTEEEEEETTT--TEEEEEEECSSCCCEEEEE
T ss_pred CCCcEEEEec-CCeEEEEchHH--hhhhcceecCCCceEEEec
Confidence 3344444444 57899999998 7889999999888777765
No 337
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=37.18 E-value=65 Score=26.26 Aligned_cols=56 Identities=14% Similarity=0.202 Sum_probs=32.7
Q ss_pred CeEEEEecCCeEEEEECCcccc-eee-eeEecC--CCEE-EEEEe---CCEEEEEecCCcEEEE
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWR-RCL-HSIQLK--DSVL-NIVHV---QGRVVCALADGSVAIF 61 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~-~~l-~~~~l~--~~V~-~i~~~---~~~v~v~LanG~l~Vy 61 (121)
.-+++||++|.|+-.-...... .+. -.+.++ .+|+ ++... ...+||+..++.+-|-
T Consensus 354 TVlFLGTd~G~L~KVvv~~~~~~~~~~~~~ei~ee~~V~~~L~ldp~~~~~LyV~s~~~V~qVP 417 (476)
T 3nvn_B 354 TVLFLGTGDGQLLKVILGENLTSNCPEVIYEIKEETPVFYKLVPDPVKNIYIYLTAGKEVRRIR 417 (476)
T ss_dssp EEEEEEETTSEEEEEECCTTSCCCCCEEEEECTTCCCBCSCCEECSSCTTEEEEEETTEEEEEE
T ss_pred EEEEEECCCceEEEEEecCCCCccceeEEEeecCCCccccccccCccccceEEEecCcEEEEEE
Confidence 3579999999999433322111 111 112232 4676 55543 3589999998776664
No 338
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=36.99 E-value=1.1e+02 Score=25.70 Aligned_cols=57 Identities=12% Similarity=0.050 Sum_probs=37.3
Q ss_pred EEEEEecCCcEEEEEcCCCCCCCCCCceE---EEeCCCCCceeEeeee--C--CEEEEEeCCeEEEEeCC
Q psy16019 48 RVVCALADGSVAIFRRGPDGQWDLSKYHT---VTLGLPHHSVRSLAAV--Y--NKVWCGYKNKIHVVDPK 110 (121)
Q Consensus 48 ~v~v~LanG~l~Vy~r~~~g~wd~~~~~~---i~lg~~~~pV~~m~~v--~--~~lw~~~gn~I~Vi~~~ 110 (121)
-+|+|..+|.|.=.-... ..... +.+-.++.||+.|.+. . ..|+++.+.+|.=+...
T Consensus 417 V~flGT~~G~l~Kvv~~~------~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~vpl~ 480 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLE------HAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQAPLA 480 (663)
T ss_dssp EEEEEETTSEEEEEEECS------SSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEEESC
T ss_pred EEEEEcCCcEEEEEEecC------CCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEEEch
Confidence 599999999875432211 11222 3333345899999876 3 67999999988766543
No 339
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=36.50 E-value=1.7e+02 Score=24.19 Aligned_cols=62 Identities=8% Similarity=0.014 Sum_probs=37.3
Q ss_pred EEEEEecCCcEE-EEEcCCCCCCCCCCceE---EEeCC---------CCCceeEeeee--CCEEEEEeCCeEEEEeCC
Q psy16019 48 RVVCALADGSVA-IFRRGPDGQWDLSKYHT---VTLGL---------PHHSVRSLAAV--YNKVWCGYKNKIHVVDPK 110 (121)
Q Consensus 48 ~v~v~LanG~l~-Vy~r~~~g~wd~~~~~~---i~lg~---------~~~pV~~m~~v--~~~lw~~~gn~I~Vi~~~ 110 (121)
-+|+|..+|.|. |.... +......+..+ +.+-. .+.||+.|.+. ...|+++...+|.=+...
T Consensus 422 VlFLGTd~G~l~Kvv~~~-~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~LYV~s~~~V~qVPl~ 498 (565)
T 3oky_B 422 VVFLGSEKGIILKFLARI-GSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYVAFSTCVIKVPLG 498 (565)
T ss_dssp EEEEEETTSEEEEEEECC------CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEEEEECSSCEEEEESC
T ss_pred EEEEECCCCeEEEEEecC-CCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEEEEEecCeEEEeehh
Confidence 589999999975 33222 11111122223 33322 14799999887 478999999888766543
No 340
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=35.49 E-value=1.6e+02 Score=23.10 Aligned_cols=106 Identities=10% Similarity=0.034 Sum_probs=53.8
Q ss_pred CCCCeEEEEecC--------CeEEEEECC-cccceeeeeE-e-cCCCEEEEEEeC-C-EEEEEecCCcEEEEEcCCCCCC
Q psy16019 3 SVLPTMWLGSQN--------GSVFVHSAV-SQWRRCLHSI-Q-LKDSVLNIVHVQ-G-RVVCALADGSVAIFRRGPDGQW 69 (121)
Q Consensus 3 ~~~~tvwiGt~~--------g~I~v~~~~-~~~~~~l~~~-~-l~~~V~~i~~~~-~-~v~v~LanG~l~Vy~r~~~g~w 69 (121)
.....|..++.+ ..|+++++. +........+ . ....+.++.+.. + .+|++..+|...+|.-+
T Consensus 197 pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~----- 271 (662)
T 3azo_A 197 PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD----- 271 (662)
T ss_dssp TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC-----
T ss_pred CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE-----
Confidence 344556555533 479999987 3200122222 2 246788888763 3 45666667755555432
Q ss_pred CCCCceEEEeCC-------CC-Cc-eeEeeee-CCEEEEEe---CCeEEEEeCCCCcE
Q psy16019 70 DLSKYHTVTLGL-------PH-HS-VRSLAAV-YNKVWCGY---KNKIHVVDPKSLDV 114 (121)
Q Consensus 70 d~~~~~~i~lg~-------~~-~p-V~~m~~v-~~~lw~~~---gn~I~Vi~~~tl~i 114 (121)
++.-+...+-. |. .| ++++... ++++.+.. ..+|+++|..+.++
T Consensus 272 -~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 272 -PATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGEL 328 (662)
T ss_dssp -TTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEE
T ss_pred -CCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcE
Confidence 21222222211 10 01 4556655 45554443 25788888877764
No 341
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=34.00 E-value=1.3e+02 Score=21.70 Aligned_cols=100 Identities=13% Similarity=0.100 Sum_probs=56.0
Q ss_pred CeE-EEEecCCeEEEEECCcccceeeeeEecC-CCEEEEEEe--CCEEEEEecC--CcEEEEEcCCCCCCCCCCceEEEe
Q psy16019 6 PTM-WLGSQNGSVFVHSAVSQWRRCLHSIQLK-DSVLNIVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTL 79 (121)
Q Consensus 6 ~tv-wiGt~~g~I~v~~~~~~~~~~l~~~~l~-~~V~~i~~~--~~~v~v~Lan--G~l~Vy~r~~~g~wd~~~~~~i~l 79 (121)
+.+ |.-+.++.|.+++......+.+ +.-. .....|... ++.+|++-.. +.|.++.. +| ...+.+.-
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~--~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~--dG----~~~~~~~~ 160 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL--NG----VDIYSLVT 160 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET--TS----CCEEEEEC
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEE--EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC--CC----CCeEEEEE
Confidence 344 4445678888888766322222 1211 355677775 6789998753 67777643 22 11222211
Q ss_pred CCCCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcE
Q psy16019 80 GLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDV 114 (121)
Q Consensus 80 g~~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i 114 (121)
..-..| .-|++. ++.||.+.. ++|.++|.+....
T Consensus 161 ~~~~~P-~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~ 198 (316)
T 1ijq_A 161 ENIQWP-NGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 198 (316)
T ss_dssp SSCSCE-EEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCCCc-eEEEEeccCCEEEEEECCCCeEEEEecCCCce
Confidence 111123 355555 688888776 5899999875433
No 342
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=33.73 E-value=92 Score=25.83 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=47.0
Q ss_pred EEEecCCeEEEEECCcccceeeee--EecCCCEEEEEEe--CCEEEEEecC--CcEEEEEcCCCCCCCCCCceEEEeCCC
Q psy16019 9 WLGSQNGSVFVHSAVSQWRRCLHS--IQLKDSVLNIVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGLP 82 (121)
Q Consensus 9 wiGt~~g~I~v~~~~~~~~~~l~~--~~l~~~V~~i~~~--~~~v~v~Lan--G~l~Vy~r~~~g~wd~~~~~~i~lg~~ 82 (121)
|.-...+.|++++.....++.+.. +..| ..|... .+++|++-.. +.|.++.. +| ...+++.-..-
T Consensus 469 ~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P---~giavDp~~g~ly~td~~~~~~I~~~~~--dG----~~~~~l~~~~l 539 (699)
T 1n7d_A 469 WTDSVLGTVSVADTKGVKRKTLFREQGSKP---RAIVVDPVHGFMYWTDWGTPAKIKKGGL--NG----VDIYSLVTENI 539 (699)
T ss_dssp ECCTTTSCEEEEBSSSCCEEEECCCSSCCC---CCEECCSSSSCCEECCCSSSCCEEBCCS--SS----CCCCEESCSSC
T ss_pred EEeccCCeEEEEecCCCceEEEEeCCCCCc---ceEEEccCCCcEEEcccCCCCeEEEEeC--CC----CCeeEEEeCCC
Confidence 444567788888877632222211 2223 334443 5678887642 56665522 22 11122110111
Q ss_pred CCceeEeeee--CCEEEEEeC--CeEEEEeCCCCc
Q psy16019 83 HHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLD 113 (121)
Q Consensus 83 ~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~ 113 (121)
..| +-|++. ++.||.+.. ++|.+++.....
T Consensus 540 ~~P-nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~ 573 (699)
T 1n7d_A 540 QWP-NGITLDLLSGRLYWVDSKLHSISSIDVNGGN 573 (699)
T ss_dssp SSC-CCEEECTTTCCEEEEETTTTEEEEECSSSSC
T ss_pred CCc-cEEEEeccCCEEEEEecCCCeEEEEccCCCc
Confidence 122 234443 577877765 579888886543
No 343
>3nvx_A Protein A39; beta-propeller, viral protein; HET: NAG; 2.00A {Vaccinia virus} PDB: 3nvn_A*
Probab=33.60 E-value=1.2e+02 Score=23.90 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=28.6
Q ss_pred eEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEE
Q psy16019 7 TMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCA 52 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~ 52 (121)
-|++||+ .|+=|+..+ |...+-+..+..++.-....-+|+|
T Consensus 333 VlflgTn--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (383)
T 3nvx_A 333 IYFIKEN--SIYSFDTKS---KQTRSSQVDARLFSVMVTSKPLFIA 373 (383)
T ss_dssp EEEEETT--EEEEEETTT---CCEEEEECSSCEEEEEESSSEEEEE
T ss_pred EEEEecc--cceeccccc---cccchhhhcceeeEEEeecCceEEE
Confidence 5899999 678888776 3344446667777766666667765
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=33.31 E-value=80 Score=26.74 Aligned_cols=86 Identities=22% Similarity=0.327 Sum_probs=52.8
Q ss_pred EEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEecCCcEEEEEcCCCCCCCCCCc--e------EEEe
Q psy16019 8 MWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCALADGSVAIFRRGPDGQWDLSKY--H------TVTL 79 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~wd~~~~--~------~i~l 79 (121)
.|-|.++|.+.||.+.+ .+.++.|. ||.+.+...|.+.+- + .+.-
T Consensus 73 f~SgG~sG~v~v~G~PS--mR~l~~Ip-------------------------VF~~~~~~G~G~t~esk~il~~~~~~~~ 125 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPS--MRELMRIP-------------------------VFNVDSATGWGLTNESRHIMGDSAKFLN 125 (638)
T ss_dssp EEECGGGCCEEEEEETT--TEEEEEEC-------------------------SSSCCTTTCTTTBHHHHHHHGGGGGCCC
T ss_pred EeecCcCceEEEEecCC--cceEEEee-------------------------cccCCCCcccCCchhHHHHHhcCCCccC
Confidence 46677777777777776 34454432 344444444544322 1 1345
Q ss_pred CCCCCceeEee---eeCCEEEEEeC--CeEEEEeCCCCcEEEEEEe
Q psy16019 80 GLPHHSVRSLA---AVYNKVWCGYK--NKIHVVDPKSLDVIRPVTI 120 (121)
Q Consensus 80 g~~~~pV~~m~---~v~~~lw~~~g--n~I~Vi~~~tl~i~~~~~~ 120 (121)
||.++|=.+.. ..+.-||+--. ++|-.|++++++..+-+|+
T Consensus 126 gD~HHp~~S~tdg~yDGrylfiNdkan~RvAri~l~~~~~d~Ii~i 171 (638)
T 3sbq_A 126 GDCHHPHISMTDGKYDGKYLFINDKANSRVARIRLDIMKCDKMITV 171 (638)
T ss_dssp CCCCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCcCCCcccccCCeeeeEEEEEecCCCcceEEEECCcEeeceeEeC
Confidence 66667754443 33466788766 4899999999999887764
No 345
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=29.64 E-value=2.3e+02 Score=23.05 Aligned_cols=91 Identities=10% Similarity=0.119 Sum_probs=44.1
Q ss_pred eEEEEECCcccceeeeeEecC-CCEEE-EEEeCCEEEEEec----CCcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEe
Q psy16019 16 SVFVHSAVSQWRRCLHSIQLK-DSVLN-IVHVQGRVVCALA----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSL 89 (121)
Q Consensus 16 ~I~v~~~~~~~~~~l~~~~l~-~~V~~-i~~~~~~v~v~La----nG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m 89 (121)
.|+++++.....++...+.-+ +.+.. +-..++++|+... ++.|.+++..... .....+. ......+..+
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~~l~-~~~~~~l~~~ 369 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST----PRFDTVV-PESKDNLESV 369 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS----CEEEEEE-CCCSSEEEEE
T ss_pred eEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc----cccEEEe-cCCCCeEEEE
Confidence 677776654200112333222 22222 2345556666554 3446666432110 1112232 2223567777
Q ss_pred eeeCCEEEEEeC----CeEEEEeCCC
Q psy16019 90 AAVYNKVWCGYK----NKIHVVDPKS 111 (121)
Q Consensus 90 ~~v~~~lw~~~g----n~I~Vi~~~t 111 (121)
...++.+.+... .+|++++...
T Consensus 370 ~~~~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 370 GIAGNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp EEEBTEEEEEEEETTEEEEEEEETTS
T ss_pred EEECCEEEEEEEECCEEEEEEEeCCC
Confidence 777888877653 3688888643
No 346
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=29.06 E-value=2e+02 Score=22.26 Aligned_cols=59 Identities=14% Similarity=0.197 Sum_probs=40.7
Q ss_pred EEecCCeEEEEECCcccc--------------------e-eeeeEecCC--CEEEEEEeCCEEEEEecCCcEEEEEcCCC
Q psy16019 10 LGSQNGSVFVHSAVSQWR--------------------R-CLHSIQLKD--SVLNIVHVQGRVVCALADGSVAIFRRGPD 66 (121)
Q Consensus 10 iGt~~g~I~v~~~~~~~~--------------------~-~l~~~~l~~--~V~~i~~~~~~v~v~LanG~l~Vy~r~~~ 66 (121)
+=+++|.||.|...+.-+ . ...-.+++. .|..|..-.+..++-..||.|..|-++..
T Consensus 327 ~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~~v~~Ia~G~~hs~al~~~G~vy~wG~n~~ 406 (473)
T 3of7_A 327 ILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGET 406 (473)
T ss_dssp EEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCSSCCEEEEEECSSEEEEEETTSCEEEEECCTT
T ss_pred EEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCCCCceEEEEeCCCeEEEEeCCCcEEEeeCCCC
Confidence 337899999998654210 0 111123443 68888888888888899999999988766
Q ss_pred CC
Q psy16019 67 GQ 68 (121)
Q Consensus 67 g~ 68 (121)
|.
T Consensus 407 Gq 408 (473)
T 3of7_A 407 YA 408 (473)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 347
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.53 E-value=2e+02 Score=21.85 Aligned_cols=60 Identities=8% Similarity=0.169 Sum_probs=34.9
Q ss_pred CCeEEEEe-------------cCCeEEEEECCcccceeeeeEecCC--------CEEEEEEeC---C--EEEEEe---cC
Q psy16019 5 LPTMWLGS-------------QNGSVFVHSAVSQWRRCLHSIQLKD--------SVLNIVHVQ---G--RVVCAL---AD 55 (121)
Q Consensus 5 ~~tvwiGt-------------~~g~I~v~~~~~~~~~~l~~~~l~~--------~V~~i~~~~---~--~v~v~L---an 55 (121)
.+.+++++ ++|.|++|+..+...+ ...+.+.. ...-|.... + ++||.- ++
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~-~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~ 138 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA-VSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSS 138 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCC-EEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTC
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc-eEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCC
Confidence 46788887 7999999998753112 22233321 556666532 3 577773 34
Q ss_pred CcEEEEEcCC
Q psy16019 56 GSVAIFRRGP 65 (121)
Q Consensus 56 G~l~Vy~r~~ 65 (121)
+++-+|+...
T Consensus 139 s~ielf~~d~ 148 (355)
T 3sre_A 139 STVEVFKFQE 148 (355)
T ss_dssp CEEEEEEEET
T ss_pred CeEEEEEEEC
Confidence 5677776544
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=26.80 E-value=2.3e+02 Score=22.27 Aligned_cols=94 Identities=11% Similarity=0.140 Sum_probs=55.5
Q ss_pred eEEEEecCCeEEEEECCccc-ceeeeeEecC------------CCEEEEEEeCC-----EEEEEecC-------C-----
Q psy16019 7 TMWLGSQNGSVFVHSAVSQW-RRCLHSIQLK------------DSVLNIVHVQG-----RVVCALAD-------G----- 56 (121)
Q Consensus 7 tvwiGt~~g~I~v~~~~~~~-~~~l~~~~l~------------~~V~~i~~~~~-----~v~v~Lan-------G----- 56 (121)
.||+....|.|++++..... ++.+. .+| .-.+.|..+.+ .+||+-+. |
T Consensus 28 rl~V~er~G~i~~~~~~g~~~~~~~~--~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~ 105 (463)
T 2wg3_C 28 RLFILEKEGYVKILTPEGEIFKEPYL--DIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHI 105 (463)
T ss_dssp CEEEEETTTEEEEECTTSCBCSSCSE--ECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEE
T ss_pred EEEEEeCCceEEEEeCCCCeeeeeec--CCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccc
Confidence 49999999999999744321 11111 222 25688888864 88887542 1
Q ss_pred -cEEEEEcCCC--CCCCCCCceE-EEeC--CCCCceeEeeee-CCEEEEEeCC
Q psy16019 57 -SVAIFRRGPD--GQWDLSKYHT-VTLG--LPHHSVRSLAAV-YNKVWCGYKN 102 (121)
Q Consensus 57 -~l~Vy~r~~~--g~wd~~~~~~-i~lg--~~~~pV~~m~~v-~~~lw~~~gn 102 (121)
.|+-|+...+ ..-|..+.++ +.+. ...+--..|+.- ++.||++.|.
T Consensus 106 ~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 106 LRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred eEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 4555665432 1223334444 3432 224556677776 4789998873
No 349
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=26.37 E-value=44 Score=21.90 Aligned_cols=17 Identities=24% Similarity=0.515 Sum_probs=15.3
Q ss_pred eEEEEeCCCCcEEEEEE
Q psy16019 103 KIHVVDPKSLDVIRPVT 119 (121)
Q Consensus 103 ~I~Vi~~~tl~i~~~~~ 119 (121)
-|.|+|.+|+++.|.++
T Consensus 70 vVkVvD~~TgEVIRqIP 86 (117)
T 2hc5_A 70 YVKVIEDSTNEVIREIP 86 (117)
T ss_dssp EEEEEETTTTEEEEEEC
T ss_pred EEEEEECCCCcEEEeCC
Confidence 58999999999999875
No 350
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=25.07 E-value=2.3e+02 Score=21.67 Aligned_cols=65 Identities=6% Similarity=0.069 Sum_probs=36.4
Q ss_pred CCCeEEEEecCCeEEEEECCcccc--eeee------eEecCCCEEEEEEeCCEEEEEe-cCCcEEEEEcCCCCCCCC
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVSQWR--RCLH------SIQLKDSVLNIVHVQGRVVCAL-ADGSVAIFRRGPDGQWDL 71 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~~~~--~~l~------~~~l~~~V~~i~~~~~~v~v~L-anG~l~Vy~r~~~g~wd~ 71 (121)
...++.+....|.|+.|+...+.+ -.+. .+..|+.++-+++.+.-++|+- ++|.+.++ ..|+ |..
T Consensus 195 dg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~--S~Dg-W~s 268 (334)
T 2p9w_A 195 HSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFR--SWDN-WKS 268 (334)
T ss_dssp TTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEE--CSST-TSE
T ss_pred CCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEE--CCCC-cce
Confidence 345666665688999999775422 1121 2334555555566665546655 45654444 3345 763
No 351
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=25.07 E-value=1.8e+02 Score=20.35 Aligned_cols=27 Identities=7% Similarity=0.140 Sum_probs=15.4
Q ss_pred eEEEEECCcccceeeeeEecCCCEEEEEEe
Q psy16019 16 SVFVHSAVSQWRRCLHSIQLKDSVLNIVHV 45 (121)
Q Consensus 16 ~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~ 45 (121)
.|+++++.. .+...-...+. +.++.+.
T Consensus 86 ~l~~~~~~~--g~~~~l~~~~~-~~~~~ws 112 (347)
T 2gop_A 86 EIWVADLET--LSSKKILEAKN-IRSLEWN 112 (347)
T ss_dssp EEEEEETTT--TEEEEEEEESE-EEEEEEC
T ss_pred eEEEEECCC--CceEEEEcCCC-ccceeEC
Confidence 477888765 23333234455 7777775
No 352
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=24.31 E-value=2e+02 Score=20.69 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=42.5
Q ss_pred CCeEEEEecCCeEEEEECCcccc---eeeeeEecC--CCEEEEEEe---CCEEEEEecCCcEEEEEcC
Q psy16019 5 LPTMWLGSQNGSVFVHSAVSQWR---RCLHSIQLK--DSVLNIVHV---QGRVVCALADGSVAIFRRG 64 (121)
Q Consensus 5 ~~tvwiGt~~g~I~v~~~~~~~~---~~l~~~~l~--~~V~~i~~~---~~~v~v~LanG~l~Vy~r~ 64 (121)
...+.+.|+.|.+...+..+-.. .-+..++|. |.+...... ++.|++...+|.+..|+-.
T Consensus 95 ~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 95 DQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp TCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 34688999999999998877421 124445664 455544433 5689999999999999764
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=24.29 E-value=3.5e+02 Score=23.39 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=48.1
Q ss_pred CCEEEEEecCCcEEEEEcC-CCCCCCC-----CCc-----eEEEeC------CCCCceeEeeeeC--CEEEEEeC-CeEE
Q psy16019 46 QGRVVCALADGSVAIFRRG-PDGQWDL-----SKY-----HTVTLG------LPHHSVRSLAAVY--NKVWCGYK-NKIH 105 (121)
Q Consensus 46 ~~~v~v~LanG~l~Vy~r~-~~g~wd~-----~~~-----~~i~lg------~~~~pV~~m~~v~--~~lw~~~g-n~I~ 105 (121)
.+.++|+|.||-|.-+.|+ .++.|.- .++ ..++.. .....+-++.... ..+|.=|. ++++
T Consensus 181 ~~~l~Vsl~dGgLlrl~r~~~~~~~~~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lftl~~D~~LR 260 (950)
T 4gq2_M 181 TSEICVSFFNGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYNVLVMLSLDYKLK 260 (950)
T ss_dssp SSEEEEEETTSCEEEEEEETTTTEEEEEEECCCCCCCBCC-------CCSSCCCTTCEEEEEEETTTTEEEEEETTCEEE
T ss_pred CCeEEEEECCCCEEEEEecCCCCCcceeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEeecCCCcEEEEEECCCEEE
Confidence 6799999999999999875 4454431 111 123221 1123455666654 57899899 5899
Q ss_pred EEeCCCCcEEEEEE
Q psy16019 106 VVDPKSLDVIRPVT 119 (121)
Q Consensus 106 Vi~~~tl~i~~~~~ 119 (121)
|=|..++++..+..
T Consensus 261 iWsl~t~~~v~t~d 274 (950)
T 4gq2_M 261 VLDLSTNQCVETIE 274 (950)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEECCCCCeEeeec
Confidence 99999999887654
No 354
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=23.82 E-value=54 Score=25.26 Aligned_cols=22 Identities=32% Similarity=0.484 Sum_probs=18.0
Q ss_pred CCEEEEEecCCcEEEEEcCCCC
Q psy16019 46 QGRVVCALADGSVAIFRRGPDG 67 (121)
Q Consensus 46 ~~~v~v~LanG~l~Vy~r~~~g 67 (121)
++-=.|-|+||.|.||.|.++.
T Consensus 133 KDIRlveL~DGrIgVfTRPqge 154 (315)
T 2b4w_A 133 KDIRVLQLQDGRLGVFSRPRVG 154 (315)
T ss_dssp CCCEEEECTTSCEEEEECCCC-
T ss_pred ceeEEEEecCCeEeeeeccCCC
Confidence 5567899999999999998653
No 355
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=23.14 E-value=3.5e+02 Score=22.97 Aligned_cols=103 Identities=13% Similarity=0.044 Sum_probs=54.7
Q ss_pred CeEEEEecCCeEEEEECCcccceeeeeEecCCCEEEEEEe--CCEEEEEec-C-CcEEEEEcCCCCCCCCCCceEEEeCC
Q psy16019 6 PTMWLGSQNGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHV--QGRVVCALA-D-GSVAIFRRGPDGQWDLSKYHTVTLGL 81 (121)
Q Consensus 6 ~tvwiGt~~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~--~~~v~v~La-n-G~l~Vy~r~~~g~wd~~~~~~i~lg~ 81 (121)
...|.-+..+.|.++++....++.+..-.+ .....|... .+++|++-. + +.|.++..+ | ....++--+.
T Consensus 484 ~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l-~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G----~~~~~lv~~~ 556 (791)
T 3m0c_C 484 NIYWTDSVLGTVSVADTKGVKRKTLFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--G----VDIYSLVTEN 556 (791)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTT-CCEEEEEEETTTTEEEEEECSSSCEEEEEETT--S----CCEEEEECSS
T ss_pred cEEEEecCCCeEEEEeCCCCeEEEEEeCCC-CCcceEEEecCCCCEEEecCCCCCeEEEEecC--C----CceEEEEeCC
Confidence 345566678888888887643332221111 345566665 468888863 2 566666322 2 1112221111
Q ss_pred CCCceeEeeee--CCEEEEEeC--CeEEEEeCCCCcEEE
Q psy16019 82 PHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLDVIR 116 (121)
Q Consensus 82 ~~~pV~~m~~v--~~~lw~~~g--n~I~Vi~~~tl~i~~ 116 (121)
-..| +-|++. ++.||.+.. ++|.+++.+......
T Consensus 557 l~~P-~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~ 594 (791)
T 3m0c_C 557 IQWP-NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 594 (791)
T ss_dssp CSCE-EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCc-eEEEEecCCCeEEEEeCCCCcEEEEecCCCceEE
Confidence 1123 345544 577766655 578888876554433
No 356
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=22.46 E-value=1.4e+02 Score=18.33 Aligned_cols=10 Identities=0% Similarity=0.142 Sum_probs=7.5
Q ss_pred ecCCeEEEEE
Q psy16019 12 SQNGSVFVHS 21 (121)
Q Consensus 12 t~~g~I~v~~ 21 (121)
..||.+.+|+
T Consensus 26 q~DgNLvly~ 35 (105)
T 4h3o_A 26 QDDCNLVLYD 35 (105)
T ss_dssp CTTSCEEEEE
T ss_pred CCCCeEEEEE
Confidence 4678888886
No 357
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.15 E-value=50 Score=20.06 Aligned_cols=20 Identities=15% Similarity=0.253 Sum_probs=15.3
Q ss_pred EEecCCeEEEEECCcccceeee
Q psy16019 10 LGSQNGSVFVHSAVSQWRRCLH 31 (121)
Q Consensus 10 iGt~~g~I~v~~~~~~~~~~l~ 31 (121)
+=|.||+.|.||... |+..+
T Consensus 25 v~T~dGR~fyyN~~T--k~S~W 44 (73)
T 2dk7_A 25 VWTGDERVFFYNPTT--RLSMW 44 (73)
T ss_dssp EEESSSCEEEEETTT--TEECS
T ss_pred EECCCCCEEEecCcc--cceec
Confidence 358899999999887 44444
No 358
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=22.01 E-value=2.4e+02 Score=20.65 Aligned_cols=92 Identities=10% Similarity=0.052 Sum_probs=55.7
Q ss_pred CCeEEEEECCcccceeeeeEecCCCEEEEEEeCCEEEEEe--cCCcEEEEEcCCCCCCCCCCceEEEeCCCCCceeEeee
Q psy16019 14 NGSVFVHSAVSQWRRCLHSIQLKDSVLNIVHVQGRVVCAL--ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA 91 (121)
Q Consensus 14 ~g~I~v~~~~~~~~~~l~~~~l~~~V~~i~~~~~~v~v~L--anG~l~Vy~r~~~g~wd~~~~~~i~lg~~~~pV~~m~~ 91 (121)
...|+..+.....++.+. .+.-..+...++++|-+. .+|.-.+|+-+.+| .+.+.|.-+.. .| +.+
T Consensus 87 ~~~Iy~i~~dg~~~~~l~----~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG----s~~~~lt~~~~-~~---~~~ 154 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTVLD----PDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDG----EEKKKIKNHYL-FT---CNT 154 (302)
T ss_dssp SEEEEEEETTSCCCEEEE----CSCEEEEEEETTEEEEEEESSSSCEEEEEEETTS----CCCEEEESSCC-CC---SEE
T ss_pred CCeEEEEeCCCCcceEee----cCCccEEEEeCCEEEEEeecCCCCceEEEEECCC----CCeEEEeCCCc-eE---eeE
Confidence 457777776664322222 122234555788888887 46777778766655 23444443331 23 466
Q ss_pred eCCEEEEEe-C-CeEEEEeCCCCcEEEE
Q psy16019 92 VYNKVWCGY-K-NKIHVVDPKSLDVIRP 117 (121)
Q Consensus 92 v~~~lw~~~-g-n~I~Vi~~~tl~i~~~ 117 (121)
.++.|+... + ++|+++++.+...++-
T Consensus 155 ~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 155 SDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp ETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred ECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 788876554 3 7899999888776543
No 359
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.49 E-value=75 Score=24.82 Aligned_cols=83 Identities=10% Similarity=-0.022 Sum_probs=49.8
Q ss_pred CEEEEEE--eCCEEEEEecC------CcEEEEEcCCCCCCCCCCceE-EEeCC---C--CCceeEeeee-CCEEEE---E
Q psy16019 38 SVLNIVH--VQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHT-VTLGL---P--HHSVRSLAAV-YNKVWC---G 99 (121)
Q Consensus 38 ~V~~i~~--~~~~v~v~Lan------G~l~Vy~r~~~g~wd~~~~~~-i~lg~---~--~~pV~~m~~v-~~~lw~---~ 99 (121)
-.+.+.. .++++||+.-- -+|+.........-...+|++ ...-+ . -.+|-.+.+- .++||+ |
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLDtG 106 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVDIG 106 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEECS
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEeCC
Confidence 3456777 68899998854 257777643211000013333 33321 1 1345555544 488887 2
Q ss_pred --------------eCCeEEEEeCCCC--cEEEEEEe
Q psy16019 100 --------------YKNKIHVVDPKSL--DVIRPVTI 120 (121)
Q Consensus 100 --------------~gn~I~Vi~~~tl--~i~~~~~~ 120 (121)
|+.+|.+||..|. ++.|+++.
T Consensus 107 ~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~ 143 (381)
T 3q6k_A 107 SVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYF 143 (381)
T ss_dssp SCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEEC
T ss_pred CcCcCCCccccCCCCCceEEEEECCCCCceeEEEEEC
Confidence 4568999999999 99998864
No 360
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=21.00 E-value=58 Score=27.11 Aligned_cols=21 Identities=14% Similarity=0.389 Sum_probs=18.0
Q ss_pred CCCeEEEEecCCeEEEEECCc
Q psy16019 4 VLPTMWLGSQNGSVFVHSAVS 24 (121)
Q Consensus 4 ~~~tvwiGt~~g~I~v~~~~~ 24 (121)
-.+.|++|++||-+|.|+...
T Consensus 84 R~~~VyvGaNDGmLHaF~a~G 104 (570)
T 3hx6_A 84 RAPRVYVGANDGMLHGFDTDG 104 (570)
T ss_dssp CCCEEEEECSSSCEEECCSSC
T ss_pred CccEEEEECCCceEEEECCCC
Confidence 357899999999999998763
No 361
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=20.99 E-value=2.7e+02 Score=20.95 Aligned_cols=61 Identities=11% Similarity=0.158 Sum_probs=43.2
Q ss_pred EEEEecCCeEEEEECCcccc--------e-eeeeEecC--CCEEEEEEeCCEEEEEecCCcEEEEEcCCCCC
Q psy16019 8 MWLGSQNGSVFVHSAVSQWR--------R-CLHSIQLK--DSVLNIVHVQGRVVCALADGSVAIFRRGPDGQ 68 (121)
Q Consensus 8 vwiGt~~g~I~v~~~~~~~~--------~-~l~~~~l~--~~V~~i~~~~~~v~v~LanG~l~Vy~r~~~g~ 68 (121)
..+=+++|.+|.|...+.-+ . .-..+++| ..|.+|..-.+..++-..||.|..|-++..|+
T Consensus 289 s~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs~alt~~G~v~~wG~n~~Gq 360 (406)
T 4d9s_A 289 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 360 (406)
T ss_dssp EEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECSSEEEEEETTSCEEEEECCTTST
T ss_pred EEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCCCeEEEEeCCCCEEEecCCCCCc
Confidence 34447899999998654210 1 11223444 47889998888999999999999999987663
No 362
>2x8n_A CV0863; non-uniform sampling, multidimensional decomposition, abacus, fragment monte carlo, structural genomics; NMR {Chromobacterium violaceum atcc 12472}
Probab=20.02 E-value=1.6e+02 Score=18.92 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=22.9
Q ss_pred CEEEEEE--eCCEEEEEecCCcEEEEEcC
Q psy16019 38 SVLNIVH--VQGRVVCALADGSVAIFRRG 64 (121)
Q Consensus 38 ~V~~i~~--~~~~v~v~LanG~l~Vy~r~ 64 (121)
.+..+.| .++.+++.|+||...-++..
T Consensus 26 ~a~~V~~~~~~~~l~v~L~dGr~l~~Pl~ 54 (111)
T 2x8n_A 26 TLRSVQYRSEEGVIVFILANDRELKFRPD 54 (111)
T ss_dssp CEEEEEEETTTTEEEEEETTCCEEEECTT
T ss_pred eeEEEEEEccCCEEEEEECCCCEEEeeHH
Confidence 4667888 88999999999999988654
Done!