Query psy16020
Match_columns 151
No_of_seqs 106 out of 329
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 18:53:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16020.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16020hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3522|consensus 99.8 2.3E-20 5.1E-25 162.3 6.9 145 5-151 569-715 (925)
2 KOG0649|consensus 99.6 2.3E-14 5E-19 111.2 12.6 126 16-148 63-199 (325)
3 KOG0274|consensus 99.3 2.7E-11 5.9E-16 104.3 13.3 129 3-142 278-410 (537)
4 PTZ00421 coronin; Provisional 99.3 2.2E-10 4.7E-15 98.0 18.1 123 16-142 76-207 (493)
5 KOG3522|consensus 99.3 6.8E-12 1.5E-16 110.1 7.9 132 16-151 669-800 (925)
6 KOG1539|consensus 99.2 2.8E-11 6.1E-16 106.0 8.8 124 17-146 452-619 (910)
7 KOG0274|consensus 99.2 1.6E-10 3.5E-15 99.6 11.8 131 2-143 317-451 (537)
8 KOG0281|consensus 99.2 2.7E-11 5.9E-16 98.1 5.4 134 4-141 225-396 (499)
9 KOG0306|consensus 99.2 3.8E-10 8.2E-15 98.3 12.1 123 10-142 503-631 (888)
10 KOG0271|consensus 99.1 4.4E-10 9.6E-15 91.9 10.5 125 8-141 149-284 (480)
11 cd00200 WD40 WD40 domain, foun 99.1 4.2E-09 9E-14 78.9 15.3 128 5-142 124-258 (289)
12 cd00200 WD40 WD40 domain, foun 99.1 9.5E-09 2.1E-13 76.9 16.4 125 7-141 84-215 (289)
13 KOG0291|consensus 99.1 5.4E-09 1.2E-13 91.3 15.9 131 2-142 293-431 (893)
14 PTZ00420 coronin; Provisional 99.1 3E-08 6.5E-13 86.1 19.0 130 8-142 66-206 (568)
15 KOG0266|consensus 99.1 8.2E-09 1.8E-13 87.4 15.1 117 16-141 204-328 (456)
16 KOG0316|consensus 99.0 6.8E-09 1.5E-13 80.6 12.2 125 8-143 9-143 (307)
17 KOG0276|consensus 99.0 4.7E-09 1E-13 90.2 11.4 109 16-134 14-128 (794)
18 KOG0310|consensus 99.0 4.3E-09 9.3E-14 87.8 10.3 128 13-151 66-203 (487)
19 KOG0316|consensus 99.0 5.4E-09 1.2E-13 81.2 10.0 128 6-142 135-266 (307)
20 KOG0285|consensus 99.0 5E-09 1.1E-13 85.3 9.9 126 4-139 256-395 (460)
21 KOG0266|consensus 99.0 3.8E-08 8.2E-13 83.3 15.7 130 5-142 235-373 (456)
22 KOG0315|consensus 98.9 2.5E-08 5.4E-13 78.0 12.5 125 2-135 26-156 (311)
23 KOG0308|consensus 98.9 1.6E-08 3.5E-13 87.1 11.6 132 7-141 108-251 (735)
24 KOG0291|consensus 98.9 3.2E-08 6.8E-13 86.6 13.4 129 16-147 351-523 (893)
25 KOG0639|consensus 98.9 2.1E-09 4.6E-14 90.5 6.0 110 26-146 478-594 (705)
26 KOG0646|consensus 98.9 4.1E-08 8.9E-13 81.7 12.9 129 5-142 163-316 (476)
27 PLN00181 protein SPA1-RELATED; 98.9 1.8E-07 3.9E-12 83.9 18.1 123 15-143 483-616 (793)
28 KOG0263|consensus 98.9 1.2E-08 2.7E-13 88.9 10.2 108 16-134 536-650 (707)
29 KOG0647|consensus 98.9 4.5E-08 9.7E-13 78.1 11.8 123 16-147 28-159 (347)
30 KOG1036|consensus 98.9 7.7E-08 1.7E-12 76.7 12.8 118 9-139 48-169 (323)
31 KOG0306|consensus 98.8 3.9E-08 8.5E-13 86.0 11.6 116 16-141 66-187 (888)
32 PTZ00421 coronin; Provisional 98.8 4.1E-07 8.9E-12 78.0 17.8 125 8-141 117-254 (493)
33 KOG0281|consensus 98.8 1.5E-08 3.2E-13 82.5 8.0 117 8-135 186-307 (499)
34 KOG0310|consensus 98.8 1.2E-07 2.6E-12 79.3 13.5 124 16-149 154-284 (487)
35 PLN00181 protein SPA1-RELATED; 98.8 3.4E-07 7.4E-12 82.1 17.4 120 4-134 563-691 (793)
36 KOG0278|consensus 98.8 9.5E-08 2E-12 74.9 11.9 124 4-137 173-301 (334)
37 KOG0272|consensus 98.8 7.8E-08 1.7E-12 79.5 11.6 123 16-141 218-383 (459)
38 KOG0265|consensus 98.8 1.1E-07 2.3E-12 75.9 11.4 117 16-141 48-171 (338)
39 KOG1036|consensus 98.8 1.7E-07 3.7E-12 74.8 12.5 119 16-146 14-137 (323)
40 PTZ00420 coronin; Provisional 98.8 9E-07 1.9E-11 77.0 18.0 120 16-143 126-259 (568)
41 KOG0301|consensus 98.8 5.3E-08 1.1E-12 84.4 10.0 114 21-141 64-215 (745)
42 KOG0273|consensus 98.8 2.2E-07 4.8E-12 77.7 13.2 124 15-141 359-490 (524)
43 KOG0318|consensus 98.7 3E-07 6.4E-12 77.9 13.2 114 25-150 160-282 (603)
44 KOG2110|consensus 98.7 7.2E-07 1.6E-11 72.8 14.8 124 9-141 81-212 (391)
45 KOG0315|consensus 98.7 5.3E-07 1.2E-11 70.6 13.4 121 6-135 115-247 (311)
46 KOG0276|consensus 98.7 1.7E-07 3.7E-12 80.8 11.4 132 2-142 83-224 (794)
47 KOG0286|consensus 98.7 6.8E-07 1.5E-11 71.2 13.8 116 16-141 56-182 (343)
48 KOG0296|consensus 98.7 1.5E-07 3.3E-12 76.6 10.3 95 28-133 301-398 (399)
49 KOG0279|consensus 98.7 5.8E-07 1.3E-11 71.2 13.2 133 7-150 96-239 (315)
50 KOG1446|consensus 98.7 9.8E-07 2.1E-11 70.5 14.5 121 15-145 14-142 (311)
51 KOG0286|consensus 98.7 1.3E-06 2.9E-11 69.6 14.8 133 5-141 86-225 (343)
52 KOG0279|consensus 98.7 4.8E-07 1E-11 71.6 12.0 119 15-144 148-273 (315)
53 KOG0271|consensus 98.7 3.5E-07 7.6E-12 75.2 11.6 128 4-141 103-243 (480)
54 KOG0643|consensus 98.7 1E-06 2.2E-11 69.6 13.7 143 3-149 81-236 (327)
55 KOG0313|consensus 98.7 6.3E-07 1.4E-11 73.4 12.9 116 16-142 261-386 (423)
56 KOG0294|consensus 98.7 4.8E-07 1E-11 72.7 11.9 80 65-147 211-300 (362)
57 KOG0284|consensus 98.7 4.4E-08 9.5E-13 80.7 6.1 116 16-141 139-260 (464)
58 KOG1273|consensus 98.7 6.6E-08 1.4E-12 77.8 6.9 82 65-149 26-111 (405)
59 KOG0319|consensus 98.7 3.2E-07 6.9E-12 80.1 11.4 116 17-143 465-587 (775)
60 KOG0265|consensus 98.7 4.3E-07 9.4E-12 72.5 11.2 126 10-138 84-251 (338)
61 KOG0646|consensus 98.7 4.5E-07 9.7E-12 75.7 11.7 126 10-146 76-219 (476)
62 KOG0275|consensus 98.6 1.9E-08 4.1E-13 81.3 3.5 120 14-142 262-387 (508)
63 KOG0263|consensus 98.6 3.6E-07 7.7E-12 79.9 11.4 115 17-141 495-615 (707)
64 KOG0277|consensus 98.6 8.6E-07 1.9E-11 69.6 12.0 126 8-142 53-187 (311)
65 KOG0640|consensus 98.6 1E-07 2.2E-12 76.7 6.9 120 15-142 172-300 (430)
66 KOG0303|consensus 98.6 6E-07 1.3E-11 74.0 10.5 121 16-141 82-211 (472)
67 KOG0285|consensus 98.6 9.9E-07 2.1E-11 72.1 11.7 115 16-141 194-315 (460)
68 KOG0649|consensus 98.6 2.9E-06 6.2E-11 66.5 13.3 136 4-149 95-251 (325)
69 KOG0284|consensus 98.5 1.9E-07 4.2E-12 77.0 6.8 116 16-141 181-302 (464)
70 KOG0275|consensus 98.5 5.5E-08 1.2E-12 78.6 3.4 129 9-142 205-345 (508)
71 TIGR03866 PQQ_ABC_repeats PQQ- 98.5 1.6E-05 3.4E-10 61.5 17.2 128 7-144 148-290 (300)
72 KOG0282|consensus 98.5 1.7E-07 3.7E-12 78.5 6.2 116 16-142 215-339 (503)
73 TIGR03300 assembly_YfgL outer 98.5 5.9E-06 1.3E-10 67.7 15.3 128 5-144 39-174 (377)
74 KOG2111|consensus 98.5 7.9E-06 1.7E-10 65.8 15.4 127 6-141 85-220 (346)
75 KOG1274|consensus 98.5 1.6E-06 3.4E-11 77.3 12.4 119 14-142 55-177 (933)
76 KOG0289|consensus 98.5 3.4E-06 7.4E-11 70.2 13.5 121 16-146 304-432 (506)
77 KOG0273|consensus 98.5 2.3E-06 5.1E-11 71.7 12.6 111 14-134 275-390 (524)
78 KOG0292|consensus 98.5 4.9E-07 1.1E-11 80.7 8.9 115 16-141 10-131 (1202)
79 KOG2048|consensus 98.5 1.1E-05 2.4E-10 70.1 16.5 129 5-141 57-192 (691)
80 KOG0319|consensus 98.5 2.6E-06 5.7E-11 74.5 12.8 122 16-142 412-544 (775)
81 KOG0299|consensus 98.5 5.2E-06 1.1E-10 69.4 13.7 134 16-150 245-431 (479)
82 PF13360 PQQ_2: PQQ-like domai 98.4 8.2E-05 1.8E-09 56.5 18.3 134 3-145 10-152 (238)
83 KOG0294|consensus 98.4 4.6E-06 1E-10 67.1 11.4 120 16-145 44-169 (362)
84 KOG1446|consensus 98.4 4.2E-05 9E-10 61.3 16.5 132 6-142 132-271 (311)
85 KOG0973|consensus 98.4 7E-06 1.5E-10 74.0 13.2 124 16-142 70-210 (942)
86 KOG0296|consensus 98.4 7.5E-06 1.6E-10 66.9 12.1 115 14-142 105-229 (399)
87 KOG0295|consensus 98.4 1.3E-05 2.9E-10 65.5 13.5 109 24-142 245-373 (406)
88 KOG0305|consensus 98.4 2.8E-06 6E-11 72.4 9.8 135 6-150 249-393 (484)
89 KOG1445|consensus 98.4 1.4E-06 2.9E-11 75.7 7.9 120 12-136 624-753 (1012)
90 KOG3881|consensus 98.4 3.6E-06 7.8E-11 69.2 9.9 124 17-149 204-336 (412)
91 KOG0301|consensus 98.4 5.3E-06 1.1E-10 72.3 11.3 112 16-142 141-256 (745)
92 KOG0264|consensus 98.3 4.5E-06 9.7E-11 69.3 9.8 108 25-136 190-306 (422)
93 KOG0305|consensus 98.3 7.3E-06 1.6E-10 69.9 10.7 119 15-142 217-340 (484)
94 KOG2695|consensus 98.3 3.2E-06 6.9E-11 68.9 8.1 124 15-144 252-387 (425)
95 TIGR03866 PQQ_ABC_repeats PQQ- 98.3 5.6E-05 1.2E-09 58.4 14.8 103 29-143 5-113 (300)
96 KOG0295|consensus 98.3 4.5E-06 9.7E-11 68.2 8.7 125 14-141 107-273 (406)
97 KOG4283|consensus 98.3 1.5E-05 3.3E-10 64.0 11.4 66 75-143 161-230 (397)
98 KOG0282|consensus 98.3 4.7E-06 1E-10 70.0 8.7 139 3-142 287-471 (503)
99 KOG0272|consensus 98.3 6.3E-06 1.4E-10 68.4 9.1 117 15-141 303-426 (459)
100 KOG0318|consensus 98.2 2.7E-05 5.9E-10 66.3 12.6 111 17-135 447-562 (603)
101 KOG0278|consensus 98.2 4.4E-06 9.5E-11 65.7 7.3 129 7-145 92-225 (334)
102 KOG0641|consensus 98.2 0.00013 2.8E-09 56.9 14.5 123 15-142 89-221 (350)
103 KOG0264|consensus 98.2 1.7E-05 3.7E-10 66.0 10.2 100 27-134 241-348 (422)
104 PF13360 PQQ_2: PQQ-like domai 98.2 0.00058 1.3E-08 51.7 17.8 134 3-142 53-200 (238)
105 PF02239 Cytochrom_D1: Cytochr 98.2 0.00037 8.1E-09 57.8 17.8 138 2-147 22-174 (369)
106 KOG0293|consensus 98.2 9.8E-06 2.1E-10 67.4 8.2 114 9-135 389-515 (519)
107 KOG1445|consensus 98.1 1.5E-05 3.2E-10 69.5 9.2 129 9-141 72-209 (1012)
108 KOG0283|consensus 98.1 8.1E-05 1.8E-09 65.7 13.8 131 3-141 397-540 (712)
109 KOG0772|consensus 98.1 1.1E-05 2.4E-10 68.6 8.0 106 26-136 282-397 (641)
110 KOG0267|consensus 98.1 7.7E-06 1.7E-10 71.7 7.1 131 11-144 65-237 (825)
111 KOG2106|consensus 98.1 8.8E-05 1.9E-09 63.1 12.9 129 8-143 192-325 (626)
112 KOG0268|consensus 98.1 2.9E-05 6.2E-10 63.7 9.7 132 3-146 96-231 (433)
113 TIGR03300 assembly_YfgL outer 98.1 0.00019 4.1E-09 58.8 14.9 132 3-143 82-218 (377)
114 PF02239 Cytochrom_D1: Cytochr 98.1 0.00025 5.3E-09 58.8 15.3 107 26-144 6-119 (369)
115 KOG2445|consensus 98.1 0.00011 2.4E-09 59.2 12.5 142 1-149 147-337 (361)
116 PRK11138 outer membrane biogen 98.1 0.0002 4.4E-09 59.2 14.6 137 4-144 42-189 (394)
117 KOG0269|consensus 98.1 3E-05 6.4E-10 68.5 9.5 123 17-149 135-268 (839)
118 KOG0288|consensus 98.0 0.00013 2.7E-09 60.7 12.4 129 5-142 292-426 (459)
119 KOG2055|consensus 98.0 6.3E-05 1.4E-09 63.2 10.6 126 16-148 214-348 (514)
120 KOG0283|consensus 98.0 0.0001 2.2E-09 65.1 12.4 117 13-135 449-578 (712)
121 KOG1539|consensus 98.0 0.00045 9.7E-09 61.7 16.2 123 9-142 152-284 (910)
122 KOG0640|consensus 98.0 7.3E-05 1.6E-09 60.5 10.4 117 16-142 217-344 (430)
123 KOG0973|consensus 98.0 6.2E-05 1.3E-09 68.1 11.0 124 16-142 14-168 (942)
124 KOG1332|consensus 98.0 1.9E-05 4E-10 61.9 6.7 116 15-133 102-241 (299)
125 KOG1188|consensus 98.0 5.2E-05 1.1E-09 61.6 9.3 136 6-149 60-216 (376)
126 KOG0645|consensus 98.0 0.00067 1.5E-08 53.9 15.2 120 16-141 15-146 (312)
127 KOG0299|consensus 98.0 4.1E-05 8.8E-10 64.1 8.6 118 16-136 143-277 (479)
128 KOG1408|consensus 98.0 2.3E-05 5.1E-10 69.0 7.5 138 3-143 366-545 (1080)
129 PF00400 WD40: WD domain, G-be 98.0 3.8E-05 8.2E-10 42.5 5.9 38 91-131 1-39 (39)
130 KOG0300|consensus 98.0 0.00012 2.5E-09 59.6 10.8 131 16-149 191-403 (481)
131 KOG1332|consensus 98.0 8.2E-05 1.8E-09 58.4 9.4 108 22-134 20-135 (299)
132 KOG0302|consensus 97.9 0.00017 3.6E-09 59.5 11.4 111 16-134 258-379 (440)
133 KOG0289|consensus 97.9 0.00019 4.2E-09 60.0 11.9 132 4-143 249-387 (506)
134 KOG1407|consensus 97.9 0.00025 5.3E-09 56.2 11.8 132 5-148 137-276 (313)
135 KOG1188|consensus 97.9 2.5E-05 5.4E-10 63.5 6.5 73 73-145 41-114 (376)
136 TIGR02658 TTQ_MADH_Hv methylam 97.9 0.00036 7.9E-09 57.6 13.4 114 24-144 11-147 (352)
137 KOG0308|consensus 97.9 0.0003 6.4E-09 61.4 12.8 111 16-136 172-288 (735)
138 KOG0288|consensus 97.9 2.3E-06 5E-11 70.8 -0.1 123 17-147 177-305 (459)
139 KOG2106|consensus 97.9 0.0006 1.3E-08 58.2 14.1 122 5-136 397-524 (626)
140 KOG0313|consensus 97.9 0.00012 2.6E-09 60.3 9.6 117 4-131 94-221 (423)
141 KOG2445|consensus 97.9 0.00034 7.4E-09 56.4 11.9 111 16-134 14-145 (361)
142 KOG0270|consensus 97.9 0.0001 2.3E-09 61.5 9.2 120 8-134 166-318 (463)
143 PRK11028 6-phosphogluconolacto 97.9 0.0017 3.8E-08 52.1 16.2 129 9-143 73-219 (330)
144 KOG2096|consensus 97.9 0.00037 8.1E-09 56.6 11.8 125 16-147 87-230 (420)
145 KOG0643|consensus 97.9 0.00017 3.7E-09 57.3 9.5 90 56-148 4-97 (327)
146 KOG0772|consensus 97.8 0.00031 6.8E-09 60.0 11.7 129 10-141 159-308 (641)
147 KOG0647|consensus 97.8 0.00059 1.3E-08 54.9 12.5 131 5-140 146-288 (347)
148 KOG1007|consensus 97.8 0.0001 2.3E-09 59.1 8.2 119 16-141 124-254 (370)
149 PF05096 Glu_cyclase_2: Glutam 97.8 0.0046 9.9E-08 49.2 17.5 137 3-147 75-217 (264)
150 TIGR02658 TTQ_MADH_Hv methylam 97.8 0.0014 2.9E-08 54.3 15.1 142 3-149 135-303 (352)
151 KOG0322|consensus 97.8 8.2E-05 1.8E-09 58.9 7.4 112 14-132 204-322 (323)
152 PRK11138 outer membrane biogen 97.8 0.00079 1.7E-08 55.7 13.7 118 3-131 273-392 (394)
153 KOG0277|consensus 97.8 0.00011 2.3E-09 58.0 7.9 99 28-136 163-268 (311)
154 KOG0642|consensus 97.8 0.00017 3.6E-09 61.8 9.3 108 25-137 306-430 (577)
155 KOG0645|consensus 97.8 0.0025 5.4E-08 50.8 14.6 121 16-144 62-194 (312)
156 KOG0293|consensus 97.7 0.00017 3.7E-09 60.2 8.4 111 22-141 363-478 (519)
157 KOG2096|consensus 97.7 0.0002 4.4E-09 58.1 8.3 114 16-133 279-402 (420)
158 KOG1273|consensus 97.7 0.00079 1.7E-08 54.7 11.6 128 10-145 19-195 (405)
159 KOG0269|consensus 97.7 0.00011 2.3E-09 65.1 7.1 103 25-134 100-208 (839)
160 KOG0292|consensus 97.7 0.00047 1E-08 62.2 11.1 109 16-134 52-166 (1202)
161 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.7 0.0018 4E-08 56.1 14.7 143 3-145 44-201 (527)
162 KOG1034|consensus 97.7 0.0006 1.3E-08 55.5 10.7 117 17-141 40-174 (385)
163 KOG0302|consensus 97.7 0.00022 4.8E-09 58.8 8.4 96 36-138 235-337 (440)
164 PF03178 CPSF_A: CPSF A subuni 97.7 0.0098 2.1E-07 47.9 17.8 136 7-150 80-230 (321)
165 KOG2048|consensus 97.7 0.00052 1.1E-08 60.0 10.4 81 63-145 26-110 (691)
166 PF08662 eIF2A: Eukaryotic tra 97.7 0.0048 1E-07 46.6 14.7 120 9-144 51-189 (194)
167 KOG2444|consensus 97.6 0.00025 5.3E-09 55.0 7.5 108 22-136 67-180 (238)
168 KOG0307|consensus 97.6 0.00025 5.4E-09 64.8 8.6 126 14-142 115-293 (1049)
169 KOG0268|consensus 97.6 0.00035 7.6E-09 57.4 8.6 133 6-141 177-353 (433)
170 cd00216 PQQ_DH Dehydrogenases 97.6 0.0019 4.1E-08 55.3 13.6 141 4-144 37-194 (488)
171 PF03178 CPSF_A: CPSF A subuni 97.6 0.0033 7.3E-08 50.6 14.3 125 4-133 10-159 (321)
172 PF05096 Glu_cyclase_2: Glutam 97.6 0.0053 1.1E-07 48.8 14.2 117 6-127 120-255 (264)
173 KOG0290|consensus 97.6 0.0014 3.1E-08 52.7 11.0 124 14-141 95-235 (364)
174 KOG0639|consensus 97.6 0.00014 3.1E-09 62.0 5.6 103 20-134 516-623 (705)
175 KOG3914|consensus 97.5 0.0012 2.6E-08 54.6 10.0 133 8-148 100-238 (390)
176 KOG0321|consensus 97.5 0.0013 2.7E-08 57.5 10.4 126 12-137 215-351 (720)
177 KOG2111|consensus 97.5 0.0057 1.2E-07 49.6 13.4 112 17-134 138-257 (346)
178 KOG0321|consensus 97.5 0.00039 8.5E-09 60.5 7.1 104 27-134 66-176 (720)
179 PRK11028 6-phosphogluconolacto 97.5 0.022 4.7E-07 45.7 17.0 124 17-143 127-272 (330)
180 KOG4547|consensus 97.4 0.0031 6.7E-08 54.3 11.9 106 27-141 72-180 (541)
181 KOG1275|consensus 97.4 0.00093 2E-08 60.4 9.0 105 27-142 149-263 (1118)
182 KOG1408|consensus 97.4 0.0025 5.3E-08 56.7 11.4 121 15-140 547-678 (1080)
183 COG1520 FOG: WD40-like repeat 97.4 0.017 3.7E-07 47.4 15.9 135 3-145 40-183 (370)
184 KOG1538|consensus 97.4 0.0005 1.1E-08 60.5 6.9 68 63-133 13-83 (1081)
185 KOG4328|consensus 97.4 0.00074 1.6E-08 56.8 7.6 108 25-141 291-411 (498)
186 KOG0270|consensus 97.4 0.0063 1.4E-07 51.1 12.9 122 3-134 273-405 (463)
187 TIGR03074 PQQ_membr_DH membran 97.4 0.0077 1.7E-07 54.5 14.5 142 3-144 161-355 (764)
188 KOG1517|consensus 97.4 0.0026 5.7E-08 58.5 11.3 117 16-137 1110-1243(1387)
189 KOG2055|consensus 97.3 0.0052 1.1E-07 52.0 11.7 104 21-134 311-418 (514)
190 PF00780 CNH: CNH domain; Int 97.3 0.056 1.2E-06 42.1 16.8 126 7-145 130-267 (275)
191 KOG1009|consensus 97.3 0.0069 1.5E-07 50.5 11.8 126 14-142 12-162 (434)
192 KOG1274|consensus 97.2 0.0055 1.2E-07 55.4 11.8 104 22-137 22-130 (933)
193 KOG4378|consensus 97.2 0.0014 3E-08 56.0 7.7 106 27-141 93-203 (673)
194 KOG0974|consensus 97.2 0.0044 9.6E-08 56.4 11.3 110 25-144 99-216 (967)
195 PF08662 eIF2A: Eukaryotic tra 97.2 0.0077 1.7E-07 45.5 11.1 97 35-142 37-142 (194)
196 KOG1517|consensus 97.2 0.0082 1.8E-07 55.4 12.6 119 17-141 1210-1340(1387)
197 KOG0290|consensus 97.2 0.0066 1.4E-07 48.9 10.7 110 16-134 197-319 (364)
198 KOG1407|consensus 97.2 0.011 2.4E-07 47.0 11.5 74 65-141 150-227 (313)
199 KOG0303|consensus 97.1 0.0072 1.6E-07 50.4 10.3 120 16-145 122-264 (472)
200 KOG2321|consensus 97.0 0.01 2.2E-07 51.6 11.1 124 9-139 127-264 (703)
201 KOG1034|consensus 97.0 0.0067 1.5E-07 49.5 9.3 107 27-143 107-221 (385)
202 cd00216 PQQ_DH Dehydrogenases 97.0 0.022 4.8E-07 48.8 13.1 107 27-145 303-436 (488)
203 KOG2110|consensus 97.0 0.018 3.8E-07 47.6 11.6 96 33-136 151-251 (391)
204 KOG1963|consensus 97.0 0.013 2.7E-07 52.7 11.4 121 16-145 252-387 (792)
205 KOG1272|consensus 97.0 0.0012 2.6E-08 55.9 4.6 119 3-133 238-362 (545)
206 KOG1587|consensus 96.9 0.0076 1.6E-07 52.6 9.7 123 16-144 348-485 (555)
207 KOG2919|consensus 96.9 0.019 4.1E-07 47.0 10.9 112 17-134 160-282 (406)
208 COG2319 FOG: WD40 repeat [Gene 96.8 0.055 1.2E-06 41.8 12.8 98 33-139 132-235 (466)
209 KOG4283|consensus 96.8 0.044 9.5E-07 44.5 12.2 90 3-92 175-279 (397)
210 KOG1240|consensus 96.8 0.019 4.1E-07 53.7 11.2 123 7-138 1184-1339(1431)
211 KOG1063|consensus 96.8 0.0053 1.1E-07 54.1 7.3 124 4-134 89-225 (764)
212 KOG1272|consensus 96.8 0.0023 5.1E-08 54.1 4.9 127 7-143 201-333 (545)
213 KOG3881|consensus 96.7 0.03 6.5E-07 46.5 10.9 124 16-145 106-247 (412)
214 KOG4328|consensus 96.7 0.012 2.7E-07 49.7 8.7 127 6-139 176-359 (498)
215 KOG1645|consensus 96.7 0.071 1.5E-06 44.7 12.7 141 5-147 225-433 (463)
216 KOG1007|consensus 96.6 0.017 3.7E-07 46.6 8.8 104 24-137 182-293 (370)
217 KOG0771|consensus 96.6 0.023 5E-07 47.3 9.6 118 17-141 148-319 (398)
218 KOG0307|consensus 96.6 0.0019 4.2E-08 59.2 3.6 112 28-141 83-200 (1049)
219 KOG4378|consensus 96.6 0.051 1.1E-06 46.8 11.7 127 5-141 152-289 (673)
220 PF13570 PQQ_3: PQQ-like domai 96.6 0.0074 1.6E-07 33.8 4.7 37 7-43 2-39 (40)
221 KOG4190|consensus 96.6 0.0097 2.1E-07 51.8 7.4 121 24-144 746-870 (1034)
222 KOG4547|consensus 96.5 0.056 1.2E-06 46.8 11.7 110 13-133 100-220 (541)
223 PF14783 BBS2_Mid: Ciliary BBS 96.5 0.059 1.3E-06 37.5 9.8 69 5-83 32-108 (111)
224 KOG0280|consensus 96.5 0.066 1.4E-06 43.3 11.2 110 22-142 130-251 (339)
225 COG2319 FOG: WD40 repeat [Gene 96.5 0.27 5.8E-06 37.9 15.5 121 14-143 64-196 (466)
226 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.5 0.17 3.6E-06 44.0 14.7 136 3-140 137-340 (527)
227 KOG1310|consensus 96.5 0.018 3.9E-07 50.0 8.4 110 16-134 51-179 (758)
228 KOG0267|consensus 96.4 0.0054 1.2E-07 54.3 5.2 93 47-142 96-193 (825)
229 KOG2139|consensus 96.4 0.025 5.4E-07 46.9 8.6 108 27-141 112-234 (445)
230 KOG2321|consensus 96.4 0.01 2.2E-07 51.6 6.6 83 63-148 134-220 (703)
231 KOG1587|consensus 96.4 0.058 1.3E-06 47.2 11.2 134 6-145 282-441 (555)
232 KOG0771|consensus 96.2 0.0092 2E-07 49.6 5.3 72 66-141 148-223 (398)
233 PF00400 WD40: WD domain, G-be 96.2 0.025 5.5E-07 30.7 5.5 36 6-41 1-39 (39)
234 smart00320 WD40 WD40 repeats. 96.2 0.025 5.4E-07 28.5 5.2 38 91-131 2-40 (40)
235 KOG0641|consensus 96.2 0.2 4.4E-06 39.4 12.1 84 47-133 208-303 (350)
236 PF08553 VID27: VID27 cytoplas 96.2 0.11 2.3E-06 47.4 11.9 127 2-133 510-647 (794)
237 PF08596 Lgl_C: Lethal giant l 96.2 0.28 6.1E-06 41.2 13.8 116 18-133 4-173 (395)
238 PF00780 CNH: CNH domain; Int 96.1 0.21 4.6E-06 38.8 12.3 119 20-149 2-143 (275)
239 KOG2919|consensus 96.1 0.053 1.1E-06 44.4 8.7 77 57-134 245-328 (406)
240 PLN02919 haloacid dehalogenase 96.1 0.31 6.7E-06 45.9 15.0 119 18-137 742-892 (1057)
241 PF08450 SGL: SMP-30/Gluconola 96.1 0.22 4.7E-06 38.3 12.0 99 19-122 137-245 (246)
242 KOG0644|consensus 96.0 0.004 8.8E-08 56.1 2.4 105 16-133 191-300 (1113)
243 KOG1409|consensus 96.0 0.17 3.7E-06 41.8 11.4 126 4-134 55-228 (404)
244 PF08450 SGL: SMP-30/Gluconola 96.0 0.47 1E-05 36.4 13.7 100 25-133 11-123 (246)
245 KOG1963|consensus 96.0 0.021 4.4E-07 51.4 6.4 77 73-149 29-106 (792)
246 KOG0300|consensus 95.9 0.22 4.9E-06 40.9 11.7 89 48-141 341-435 (481)
247 COG2706 3-carboxymuconate cycl 95.9 0.29 6.3E-06 40.3 12.4 121 25-145 100-237 (346)
248 KOG2695|consensus 95.9 0.026 5.6E-07 46.5 6.1 117 8-137 205-333 (425)
249 KOG1063|consensus 95.7 0.02 4.3E-07 50.6 5.3 74 57-133 520-602 (764)
250 KOG1240|consensus 95.7 0.25 5.3E-06 46.7 12.3 125 16-141 1099-1233(1431)
251 PHA02713 hypothetical protein; 95.6 0.16 3.4E-06 44.4 10.5 66 67-136 458-536 (557)
252 KOG4190|consensus 95.6 0.063 1.4E-06 46.9 7.8 131 2-139 770-912 (1034)
253 PF10282 Lactonase: Lactonase, 95.6 1 2.2E-05 36.7 16.9 117 15-136 36-177 (345)
254 KOG1310|consensus 95.5 0.092 2E-06 45.8 8.4 74 58-134 46-126 (758)
255 PF10282 Lactonase: Lactonase, 95.5 1.1 2.4E-05 36.5 18.6 127 16-144 87-237 (345)
256 KOG0650|consensus 95.4 0.03 6.4E-07 49.0 5.2 111 16-137 567-684 (733)
257 KOG2079|consensus 95.4 0.12 2.6E-06 48.0 9.2 106 15-126 89-198 (1206)
258 TIGR02276 beta_rpt_yvtn 40-res 95.3 0.11 2.5E-06 28.6 5.9 30 72-101 3-34 (42)
259 KOG4499|consensus 95.3 0.77 1.7E-05 36.4 12.2 49 72-123 222-275 (310)
260 KOG4714|consensus 95.2 0.058 1.3E-06 43.0 5.8 117 15-135 91-212 (319)
261 COG3391 Uncharacterized conser 95.1 1.6 3.5E-05 36.2 15.0 127 4-140 104-246 (381)
262 PF11768 DUF3312: Protein of u 94.9 0.21 4.6E-06 43.4 8.9 66 63-133 260-329 (545)
263 KOG0974|consensus 94.9 0.36 7.8E-06 44.5 10.6 96 27-133 147-246 (967)
264 KOG4227|consensus 94.7 0.57 1.2E-05 39.6 10.6 116 18-136 59-182 (609)
265 KOG0322|consensus 94.7 0.14 3.1E-06 40.9 6.8 122 16-141 151-289 (323)
266 KOG0882|consensus 94.7 0.3 6.5E-06 41.7 9.1 119 20-144 102-242 (558)
267 KOG2315|consensus 94.7 1 2.2E-05 39.3 12.3 115 11-141 264-397 (566)
268 KOG0650|consensus 94.7 0.064 1.4E-06 47.0 5.1 50 97-149 396-446 (733)
269 KOG2139|consensus 94.6 1 2.2E-05 37.6 11.7 121 7-131 130-266 (445)
270 PF14783 BBS2_Mid: Ciliary BBS 94.6 1 2.2E-05 31.3 13.4 88 26-129 16-110 (111)
271 KOG0280|consensus 94.6 0.34 7.4E-06 39.3 8.7 113 16-133 70-196 (339)
272 PF04762 IKI3: IKI3 family; I 94.5 2.4 5.2E-05 39.6 15.3 132 2-133 413-564 (928)
273 KOG2114|consensus 94.5 1.5 3.2E-05 40.2 13.4 135 5-144 107-254 (933)
274 PRK02888 nitrous-oxide reducta 94.4 0.53 1.1E-05 41.8 10.2 120 4-137 223-355 (635)
275 PF12894 Apc4_WD40: Anaphase-p 94.3 0.2 4.3E-06 29.3 5.2 41 8-48 4-46 (47)
276 PHA03098 kelch-like protein; P 94.2 1.3 2.9E-05 38.0 12.4 120 7-135 371-513 (534)
277 KOG1409|consensus 94.2 0.5 1.1E-05 39.1 9.0 99 27-133 167-270 (404)
278 PF05694 SBP56: 56kDa selenium 94.2 1.4 3.1E-05 37.7 12.0 133 7-145 53-242 (461)
279 PF06433 Me-amine-dh_H: Methyl 94.2 0.38 8.2E-06 39.7 8.4 57 82-142 270-329 (342)
280 PHA03098 kelch-like protein; P 94.1 1.2 2.7E-05 38.2 12.0 111 18-136 335-467 (534)
281 KOG3914|consensus 93.9 0.13 2.9E-06 42.8 5.3 79 16-100 152-234 (390)
282 KOG4649|consensus 93.8 2.2 4.7E-05 34.5 11.7 107 25-143 23-133 (354)
283 KOG4714|consensus 93.8 0.078 1.7E-06 42.3 3.6 88 46-134 162-255 (319)
284 PHA02790 Kelch-like protein; P 93.8 1.8 4E-05 37.0 12.3 107 18-135 355-472 (480)
285 smart00320 WD40 WD40 repeats. 93.7 0.24 5.1E-06 24.5 4.5 36 6-41 2-40 (40)
286 KOG1524|consensus 93.7 2.5 5.4E-05 37.1 12.6 102 27-133 77-216 (737)
287 KOG1064|consensus 93.6 0.42 9.1E-06 47.0 8.5 55 82-141 2316-2374(2439)
288 KOG0642|consensus 93.3 0.14 3.1E-06 44.4 4.6 70 73-145 502-573 (577)
289 TIGR03548 mutarot_permut cycli 93.1 3.1 6.7E-05 33.4 12.0 100 19-124 117-233 (323)
290 PRK02888 nitrous-oxide reducta 93.1 2.1 4.6E-05 38.2 11.6 110 25-143 288-424 (635)
291 KOG1912|consensus 93.0 0.2 4.3E-06 45.4 5.2 110 27-143 439-561 (1062)
292 PF06433 Me-amine-dh_H: Methyl 92.9 4.6 0.0001 33.4 13.8 143 3-148 125-292 (342)
293 KOG2394|consensus 92.9 1.5 3.2E-05 38.4 10.1 123 15-140 219-369 (636)
294 KOG4649|consensus 92.8 2.6 5.7E-05 34.0 10.8 88 5-98 42-132 (354)
295 COG1520 FOG: WD40-like repeat 92.7 4.8 0.0001 32.9 14.8 134 5-143 130-278 (370)
296 KOG1334|consensus 92.7 0.16 3.5E-06 43.5 4.1 121 15-138 336-471 (559)
297 PRK05137 tolB translocation pr 92.7 4.1 8.9E-05 34.1 12.6 80 52-137 193-282 (435)
298 COG3823 Glutamine cyclotransfe 92.6 1.9 4.1E-05 33.7 9.4 78 49-126 159-252 (262)
299 COG4946 Uncharacterized protei 92.4 6.5 0.00014 34.2 13.2 103 25-138 371-482 (668)
300 PLN02153 epithiospecifier prot 92.4 5 0.00011 32.5 12.8 112 20-136 132-287 (341)
301 PF14655 RAB3GAP2_N: Rab3 GTPa 92.4 1.8 3.9E-05 36.7 10.0 84 60-145 305-410 (415)
302 KOG3621|consensus 92.4 0.64 1.4E-05 41.5 7.5 112 17-134 37-155 (726)
303 TIGR03074 PQQ_membr_DH membran 92.3 1.3 2.9E-05 40.4 9.7 73 69-142 191-287 (764)
304 PF13570 PQQ_3: PQQ-like domai 92.3 0.42 9.1E-06 26.4 4.3 24 67-90 16-40 (40)
305 KOG1334|consensus 92.2 0.32 6.8E-06 41.8 5.2 79 63-142 337-433 (559)
306 PHA02713 hypothetical protein; 92.2 3.1 6.7E-05 36.4 11.6 108 17-134 343-489 (557)
307 PF01011 PQQ: PQQ enzyme repea 92.2 0.52 1.1E-05 25.9 4.5 28 73-100 1-29 (38)
308 PF08596 Lgl_C: Lethal giant l 91.9 2.3 5.1E-05 35.7 10.1 126 17-145 137-302 (395)
309 KOG2066|consensus 91.8 5.5 0.00012 36.4 12.6 107 25-142 83-196 (846)
310 KOG1354|consensus 91.6 1.6 3.4E-05 36.3 8.4 40 106-145 166-206 (433)
311 KOG1524|consensus 91.4 0.13 2.8E-06 44.8 2.1 55 75-133 79-134 (737)
312 PLN02919 haloacid dehalogenase 91.3 13 0.00029 35.2 16.7 121 19-139 686-839 (1057)
313 KOG2063|consensus 91.3 0.084 1.8E-06 48.4 1.0 81 13-93 13-100 (877)
314 TIGR02276 beta_rpt_yvtn 40-res 91.2 0.82 1.8E-05 25.0 4.8 32 114-145 3-34 (42)
315 PF04053 Coatomer_WDAD: Coatom 91.2 4.5 9.8E-05 34.6 11.3 65 73-142 117-196 (443)
316 PLN02193 nitrile-specifier pro 91.0 8.7 0.00019 32.8 12.9 112 19-136 272-413 (470)
317 KOG4227|consensus 91.0 1.2 2.5E-05 37.8 7.2 80 61-142 55-144 (609)
318 KOG2394|consensus 90.8 1.8 3.9E-05 37.8 8.4 110 27-139 187-326 (636)
319 PF07569 Hira: TUP1-like enhan 90.7 1.9 4.2E-05 33.2 7.9 41 4-44 1-41 (219)
320 PF10395 Utp8: Utp8 family; I 90.7 12 0.00027 33.6 15.4 136 9-146 123-318 (670)
321 TIGR03547 muta_rot_YjhT mutatr 90.6 7.9 0.00017 31.2 12.4 100 21-124 13-128 (346)
322 PF11715 Nup160: Nucleoporin N 90.5 0.45 9.7E-06 41.2 4.6 31 114-144 229-259 (547)
323 PRK01742 tolB translocation pr 90.3 9.2 0.0002 32.0 12.3 69 63-137 204-284 (429)
324 KOG0644|consensus 90.3 0.15 3.3E-06 46.4 1.7 75 63-140 191-269 (1113)
325 smart00564 PQQ beta-propeller 90.3 1.1 2.5E-05 23.2 4.6 26 71-96 5-31 (33)
326 KOG1009|consensus 90.3 2.4 5.2E-05 35.7 8.5 123 16-141 66-203 (434)
327 KOG2395|consensus 89.7 5.3 0.00012 35.1 10.3 100 25-133 394-500 (644)
328 PF11715 Nup160: Nucleoporin N 89.7 1.3 2.7E-05 38.4 6.8 76 24-99 157-258 (547)
329 PF14779 BBS1: Ciliary BBSome 89.5 3 6.4E-05 33.2 8.2 64 15-86 176-255 (257)
330 KOG1523|consensus 89.4 3.8 8.2E-05 33.7 8.7 123 5-133 44-176 (361)
331 PRK14131 N-acetylneuraminic ac 89.3 11 0.00024 31.0 13.3 100 20-124 33-149 (376)
332 COG4946 Uncharacterized protei 89.2 14 0.00031 32.2 13.4 107 26-145 332-453 (668)
333 PF14779 BBS1: Ciliary BBSome 89.0 4.9 0.00011 31.9 9.0 64 62-129 176-254 (257)
334 KOG4640|consensus 88.8 4.2 9E-05 36.2 9.2 97 7-113 12-114 (665)
335 PRK03629 tolB translocation pr 88.8 13 0.00028 31.2 12.4 101 27-139 166-281 (429)
336 PF11768 DUF3312: Protein of u 88.7 4.4 9.5E-05 35.5 9.2 72 9-89 253-329 (545)
337 PRK04922 tolB translocation pr 88.7 12 0.00027 31.3 12.0 82 52-139 195-286 (433)
338 COG3386 Gluconolactonase [Carb 88.5 12 0.00026 30.4 11.9 94 26-125 175-278 (307)
339 smart00564 PQQ beta-propeller 88.4 1.1 2.4E-05 23.2 3.6 23 22-44 3-25 (33)
340 PF03022 MRJP: Major royal jel 88.4 4.4 9.6E-05 32.4 8.6 61 80-140 33-103 (287)
341 PF07569 Hira: TUP1-like enhan 88.2 4.7 0.0001 31.1 8.4 76 55-134 8-96 (219)
342 PF05694 SBP56: 56kDa selenium 87.9 3.1 6.7E-05 35.6 7.7 86 3-90 229-343 (461)
343 PRK05137 tolB translocation pr 87.9 15 0.00032 30.8 13.4 70 63-136 246-325 (435)
344 PRK03629 tolB translocation pr 87.7 16 0.00034 30.8 12.1 71 63-137 287-367 (429)
345 COG3391 Uncharacterized conser 87.3 16 0.00034 30.3 14.1 103 25-138 85-195 (381)
346 KOG1912|consensus 87.0 1.5 3.3E-05 40.0 5.5 70 73-145 78-155 (1062)
347 PF04053 Coatomer_WDAD: Coatom 86.9 19 0.0004 30.9 12.6 68 10-89 103-173 (443)
348 COG3823 Glutamine cyclotransfe 86.4 14 0.0003 29.0 11.2 136 3-146 75-217 (262)
349 KOG1645|consensus 86.3 4.2 9E-05 34.5 7.4 68 63-134 194-267 (463)
350 KOG2066|consensus 86.2 16 0.00035 33.5 11.5 88 6-99 103-197 (846)
351 COG5276 Uncharacterized conser 86.0 18 0.00039 29.8 16.3 136 4-148 75-217 (370)
352 COG3292 Predicted periplasmic 85.5 2.6 5.6E-05 37.2 6.1 97 16-123 165-266 (671)
353 PF10313 DUF2415: Uncharacteri 85.5 3.9 8.5E-05 23.5 5.0 36 106-141 2-42 (43)
354 COG3292 Predicted periplasmic 85.0 2.7 5.8E-05 37.1 5.9 105 25-136 386-494 (671)
355 PRK01742 tolB translocation pr 84.4 20 0.00044 30.0 11.0 65 72-141 344-411 (429)
356 KOG0379|consensus 84.0 26 0.00056 30.2 11.6 110 20-134 117-250 (482)
357 PF08728 CRT10: CRT10; InterP 83.9 7.6 0.00017 35.3 8.5 70 63-134 41-133 (717)
358 PF14781 BBS2_N: Ciliary BBSom 83.8 14 0.0003 26.6 11.3 106 27-140 12-132 (136)
359 KOG1538|consensus 83.8 3.7 8.1E-05 37.1 6.4 123 5-142 42-170 (1081)
360 KOG1523|consensus 83.5 23 0.00049 29.3 10.3 115 14-133 9-130 (361)
361 PF10433 MMS1_N: Mono-function 83.2 19 0.0004 30.9 10.5 100 25-132 222-341 (504)
362 KOG2114|consensus 83.2 33 0.00072 31.9 12.1 83 12-101 168-256 (933)
363 KOG1064|consensus 83.0 1.8 4E-05 42.9 4.5 72 62-145 2336-2410(2439)
364 PRK02889 tolB translocation pr 82.9 27 0.00058 29.3 12.0 69 63-135 196-274 (427)
365 KOG1354|consensus 82.9 7.1 0.00015 32.6 7.3 72 63-134 26-117 (433)
366 PF08309 LVIVD: LVIVD repeat; 82.7 6.8 0.00015 22.2 5.9 27 17-43 3-29 (42)
367 KOG1275|consensus 81.5 8.1 0.00018 36.0 7.7 68 73-144 149-216 (1118)
368 PHA02790 Kelch-like protein; P 81.5 23 0.0005 30.3 10.4 111 10-134 303-424 (480)
369 PF07494 Reg_prop: Two compone 81.3 2.4 5.2E-05 20.9 2.6 19 63-81 5-24 (24)
370 TIGR03548 mutarot_permut cycli 81.3 26 0.00056 28.0 14.8 111 19-136 66-197 (323)
371 PF12341 DUF3639: Protein of u 80.7 3.6 7.8E-05 21.3 3.2 25 17-41 3-27 (27)
372 TIGR02800 propeller_TolB tol-p 80.6 30 0.00065 28.3 13.2 71 63-137 190-270 (417)
373 KOG1900|consensus 80.3 5.6 0.00012 38.2 6.5 97 12-134 172-273 (1311)
374 KOG1898|consensus 79.9 11 0.00024 35.7 8.1 102 33-139 910-1012(1205)
375 PF01011 PQQ: PQQ enzyme repea 79.7 7.7 0.00017 21.0 5.1 30 117-147 3-32 (38)
376 KOG3621|consensus 79.3 3.2 6.9E-05 37.3 4.4 106 19-128 82-194 (726)
377 PLN00033 photosystem II stabil 79.3 37 0.00081 28.6 12.4 111 16-128 281-395 (398)
378 PF07433 DUF1513: Protein of u 79.2 15 0.00031 30.1 7.9 67 75-142 20-95 (305)
379 COG5422 ROM1 RhoGEF, Guanine n 79.2 57 0.0012 30.7 12.2 122 9-141 1002-1133(1175)
380 PF04762 IKI3: IKI3 family; I 78.9 58 0.0013 30.6 15.5 112 24-145 32-161 (928)
381 KOG3611|consensus 78.8 10 0.00022 34.6 7.5 61 27-87 427-490 (737)
382 KOG2314|consensus 78.6 6.6 0.00014 34.7 6.0 57 81-139 282-340 (698)
383 PRK00178 tolB translocation pr 78.3 38 0.00082 28.1 12.7 72 63-138 199-280 (430)
384 KOG1896|consensus 77.9 71 0.0015 31.0 14.5 83 5-88 1013-1123(1366)
385 PF07433 DUF1513: Protein of u 77.6 38 0.00081 27.7 11.0 84 59-144 159-258 (305)
386 KOG4640|consensus 76.3 5.6 0.00012 35.4 5.0 44 3-46 48-95 (665)
387 KOG1832|consensus 75.9 3.9 8.5E-05 38.2 4.1 79 60-141 1099-1184(1516)
388 PF10395 Utp8: Utp8 family; I 75.6 25 0.00054 31.8 8.9 72 21-98 238-314 (670)
389 PF03022 MRJP: Major royal jel 75.0 21 0.00047 28.5 7.8 129 3-134 41-216 (287)
390 KOG1897|consensus 75.0 78 0.0017 30.1 12.4 114 4-129 818-938 (1096)
391 PF04841 Vps16_N: Vps16, N-ter 74.0 53 0.0011 27.6 10.9 63 75-144 194-257 (410)
392 PF02191 OLF: Olfactomedin-lik 72.7 45 0.00097 26.3 9.4 74 63-138 121-208 (250)
393 PLN02153 epithiospecifier prot 72.4 49 0.0011 26.6 14.7 111 19-135 26-169 (341)
394 PF14761 HPS3_N: Hermansky-Pud 72.0 43 0.00094 25.9 8.4 80 6-88 123-213 (215)
395 PRK04922 tolB translocation pr 71.6 59 0.0013 27.2 14.0 68 67-138 296-373 (433)
396 PLN02193 nitrile-specifier pro 71.4 64 0.0014 27.5 12.6 113 19-136 169-305 (470)
397 KOG4441|consensus 70.7 76 0.0016 28.1 12.8 112 15-136 417-549 (571)
398 smart00036 CNH Domain found in 70.6 54 0.0012 26.3 14.8 123 16-143 152-280 (302)
399 TIGR02800 propeller_TolB tol-p 70.3 58 0.0013 26.6 13.7 61 72-136 289-357 (417)
400 PRK02889 tolB translocation pr 69.7 66 0.0014 26.9 14.0 63 72-138 295-365 (427)
401 KOG1898|consensus 69.5 22 0.00048 33.7 7.3 74 12-89 534-618 (1205)
402 KOG4532|consensus 69.0 58 0.0013 26.5 8.7 82 16-102 204-295 (344)
403 PRK01029 tolB translocation pr 68.9 70 0.0015 27.0 11.9 63 72-138 338-408 (428)
404 KOG2444|consensus 68.8 13 0.00027 29.2 4.9 67 72-141 70-140 (238)
405 PF13970 DUF4221: Domain of un 68.3 16 0.00035 29.5 5.8 64 81-145 67-134 (333)
406 KOG0309|consensus 68.1 5.9 0.00013 36.2 3.3 60 72-134 170-233 (1081)
407 PRK13684 Ycf48-like protein; P 67.2 67 0.0015 26.1 11.5 111 16-131 215-329 (334)
408 KOG4499|consensus 66.5 33 0.00072 27.4 6.9 36 109-144 216-252 (310)
409 PF09826 Beta_propel: Beta pro 66.3 54 0.0012 28.7 8.9 43 72-118 22-67 (521)
410 PF09826 Beta_propel: Beta pro 65.2 90 0.002 27.3 10.0 30 63-92 492-521 (521)
411 KOG1897|consensus 65.0 57 0.0012 31.0 8.9 52 25-80 595-650 (1096)
412 PF08553 VID27: VID27 cytoplas 65.0 30 0.00064 32.0 7.2 70 63-133 526-606 (794)
413 PF12234 Rav1p_C: RAVE protein 64.7 36 0.00077 30.6 7.5 71 15-88 72-155 (631)
414 KOG2079|consensus 64.7 16 0.00036 34.6 5.5 79 63-143 88-170 (1206)
415 KOG0576|consensus 63.9 26 0.00056 32.0 6.4 127 8-142 647-787 (829)
416 KOG1008|consensus 63.8 1.9 4.2E-05 38.5 -0.5 105 28-141 73-193 (783)
417 KOG4532|consensus 63.7 80 0.0017 25.7 10.2 106 27-141 130-242 (344)
418 PRK00178 tolB translocation pr 63.4 86 0.0019 26.0 13.8 62 72-137 254-323 (430)
419 COG5170 CDC55 Serine/threonine 63.1 64 0.0014 26.9 8.1 34 11-44 22-57 (460)
420 COG3386 Gluconolactonase [Carb 62.9 82 0.0018 25.6 11.0 72 72-144 174-253 (307)
421 KOG2063|consensus 62.8 93 0.002 29.2 10.0 121 10-141 152-276 (877)
422 TIGR03032 conserved hypothetic 62.7 88 0.0019 25.9 9.8 75 71-149 211-306 (335)
423 PRK04792 tolB translocation pr 62.6 95 0.0021 26.3 13.3 62 72-137 273-342 (448)
424 KOG2315|consensus 62.0 79 0.0017 28.0 8.9 85 55-146 264-357 (566)
425 PF00930 DPPIV_N: Dipeptidyl p 61.5 13 0.00028 30.3 4.0 55 80-138 22-76 (353)
426 PF15492 Nbas_N: Neuroblastoma 61.0 23 0.0005 28.5 5.2 39 103-141 228-267 (282)
427 PF12768 Rax2: Cortical protei 60.1 89 0.0019 25.1 9.1 73 14-92 35-126 (281)
428 KOG0882|consensus 58.7 1.3E+02 0.0027 26.3 9.7 113 25-145 64-188 (558)
429 PRK13684 Ycf48-like protein; P 58.4 1E+02 0.0022 25.1 12.5 107 16-128 173-284 (334)
430 PF14870 PSII_BNR: Photosynthe 57.7 1E+02 0.0022 25.0 13.1 113 10-127 9-127 (302)
431 PF13964 Kelch_6: Kelch motif 56.2 35 0.00075 19.2 4.6 26 68-93 7-40 (50)
432 PF05131 Pep3_Vps18: Pep3/Vps1 54.8 78 0.0017 22.8 9.0 61 62-123 33-95 (147)
433 COG4993 Gcd Glucose dehydrogen 54.3 80 0.0017 28.7 7.7 119 24-143 213-366 (773)
434 KOG0379|consensus 53.4 1.5E+02 0.0032 25.6 11.8 111 21-136 66-201 (482)
435 PF14269 Arylsulfotran_2: Aryl 52.9 1.2E+02 0.0026 24.4 8.2 81 65-145 146-241 (299)
436 PF14781 BBS2_N: Ciliary BBSom 52.9 84 0.0018 22.6 7.4 70 74-147 12-95 (136)
437 PF14870 PSII_BNR: Photosynthe 52.9 1.2E+02 0.0027 24.5 9.2 111 15-130 186-301 (302)
438 PF09910 DUF2139: Uncharacteri 52.0 1.4E+02 0.0029 24.7 9.1 80 7-94 91-186 (339)
439 PF01403 Sema: Sema domain; I 51.8 38 0.00083 28.4 5.4 45 28-74 384-433 (433)
440 KOG2395|consensus 51.0 46 0.00099 29.5 5.7 57 25-89 441-500 (644)
441 COG4880 Secreted protein conta 50.1 1.8E+02 0.0038 25.5 12.6 101 20-133 106-210 (603)
442 KOG4497|consensus 49.7 14 0.0003 30.8 2.3 79 63-145 11-91 (447)
443 KOG4441|consensus 48.8 1.9E+02 0.0042 25.6 12.1 124 6-137 361-503 (571)
444 PF08801 Nucleoporin_N: Nup133 47.1 1E+02 0.0022 25.6 7.3 26 63-88 27-53 (422)
445 COG2706 3-carboxymuconate cycl 46.4 1.7E+02 0.0038 24.3 13.1 117 16-136 40-178 (346)
446 PF12768 Rax2: Cortical protei 45.9 1.6E+02 0.0034 23.7 11.4 96 36-140 17-130 (281)
447 PF14761 HPS3_N: Hermansky-Pud 45.4 1.4E+02 0.0031 23.1 10.5 75 51-131 9-93 (215)
448 KOG0918|consensus 45.0 1.2E+02 0.0027 26.0 7.2 86 3-89 236-342 (476)
449 KOG3630|consensus 45.0 74 0.0016 30.8 6.4 87 27-121 170-260 (1405)
450 TIGR02604 Piru_Ver_Nterm putat 43.9 1.8E+02 0.0039 23.8 10.4 97 19-121 75-201 (367)
451 PRK04792 tolB translocation pr 43.9 2E+02 0.0043 24.3 14.8 61 72-137 317-386 (448)
452 PF14583 Pectate_lyase22: Olig 43.8 2E+02 0.0044 24.4 10.5 71 32-102 44-123 (386)
453 PRK14131 N-acetylneuraminic ac 43.0 1.9E+02 0.004 23.7 11.6 41 82-123 190-230 (376)
454 COG4257 Vgb Streptogramin lyas 42.9 1.1E+02 0.0023 25.2 6.3 65 71-136 198-265 (353)
455 COG4257 Vgb Streptogramin lyas 42.3 1.9E+02 0.0042 23.7 8.3 80 54-134 96-187 (353)
456 TIGR02604 Piru_Ver_Nterm putat 41.9 1.8E+02 0.0038 23.8 7.8 66 66-133 17-99 (367)
457 KOG1920|consensus 41.3 2.2E+02 0.0048 27.8 8.9 76 63-142 69-147 (1265)
458 KOG1027|consensus 40.6 67 0.0015 30.0 5.3 40 71-114 106-146 (903)
459 PF11635 Med16: Mediator compl 40.2 52 0.0011 30.1 4.7 38 6-43 250-289 (753)
460 KOG2041|consensus 39.9 88 0.0019 29.0 5.9 71 63-136 15-104 (1189)
461 COG5170 CDC55 Serine/threonine 39.4 40 0.00087 28.0 3.5 77 63-143 230-320 (460)
462 PLN00033 photosystem II stabil 39.2 2.4E+02 0.0051 23.8 13.4 80 17-98 89-172 (398)
463 COG5354 Uncharacterized protei 38.9 2.8E+02 0.006 24.5 10.3 106 14-134 273-396 (561)
464 PF01344 Kelch_1: Kelch motif; 38.8 67 0.0015 17.4 4.5 26 67-92 6-39 (47)
465 KOG1920|consensus 38.5 3.9E+02 0.0085 26.2 12.4 69 16-92 69-141 (1265)
466 TIGR03547 muta_rot_YjhT mutatr 38.4 2.1E+02 0.0045 22.9 9.3 69 67-135 12-95 (346)
467 PF01436 NHL: NHL repeat; Int 37.1 59 0.0013 16.2 3.5 13 80-92 12-24 (28)
468 PF14339 DUF4394: Domain of un 36.6 1.6E+02 0.0034 23.2 6.3 33 63-95 27-62 (236)
469 KOG2584|consensus 35.6 2.7E+02 0.0059 24.3 7.9 34 63-96 388-421 (522)
470 PF04841 Vps16_N: Vps16, N-ter 34.2 2.8E+02 0.0061 23.3 9.9 48 82-133 62-109 (410)
471 COG5276 Uncharacterized conser 34.1 2.7E+02 0.006 23.1 14.1 114 6-125 119-234 (370)
472 PF03646 FlaG: FlaG protein; 34.0 47 0.001 22.3 2.7 18 82-99 69-86 (107)
473 PRK04043 tolB translocation pr 31.6 3.2E+02 0.0068 23.0 11.4 62 72-137 244-313 (419)
474 PF14836 Ubiquitin_3: Ubiquiti 31.1 19 0.00041 23.9 0.3 20 30-49 67-87 (88)
475 PF15525 DUF4652: Domain of un 30.8 1.7E+02 0.0037 22.4 5.4 48 80-134 139-186 (200)
476 COG5167 VID27 Protein involved 29.5 4.2E+02 0.0092 23.8 9.5 124 2-133 496-632 (776)
477 KOG3535|consensus 28.7 1.4E+02 0.0031 25.8 5.1 61 71-137 90-155 (557)
478 PF08806 Sep15_SelM: Sep15/Sel 28.6 65 0.0014 20.7 2.5 26 120-146 38-63 (78)
479 PF10387 DUF2442: Protein of u 28.1 1.6E+02 0.0034 18.4 4.4 27 18-44 1-28 (79)
480 PRK04043 tolB translocation pr 27.7 3.7E+02 0.008 22.6 12.8 59 75-137 203-269 (419)
481 PF05935 Arylsulfotrans: Aryls 27.5 4E+02 0.0086 22.9 12.4 61 80-141 223-309 (477)
482 PF08955 BofC_C: BofC C-termin 27.1 31 0.00068 22.2 0.8 19 25-43 8-27 (75)
483 COG4993 Gcd Glucose dehydrogen 26.9 3.3E+02 0.0073 24.9 7.3 71 69-141 211-298 (773)
484 PF06977 SdiA-regulated: SdiA- 26.4 3.2E+02 0.0069 21.4 12.0 74 57-133 16-94 (248)
485 KOG4693|consensus 26.1 3.7E+02 0.0081 22.1 8.8 108 36-147 217-348 (392)
486 smart00036 CNH Domain found in 26.0 3.4E+02 0.0074 21.6 13.6 55 64-120 245-299 (302)
487 PF15492 Nbas_N: Neuroblastoma 25.6 3.6E+02 0.0079 21.8 9.5 68 73-141 9-80 (282)
488 PF13854 Kelch_5: Kelch motif 25.5 1.2E+02 0.0027 16.4 4.3 10 81-90 32-41 (42)
489 PF12275 DUF3616: Protein of u 25.5 1.6E+02 0.0034 24.4 4.8 58 69-126 7-80 (330)
490 KOG4497|consensus 25.3 2.2E+02 0.0047 24.0 5.5 69 62-134 318-392 (447)
491 COG5167 VID27 Protein involved 25.2 2.4E+02 0.0052 25.3 6.0 58 24-89 572-632 (776)
492 KOG0309|consensus 24.4 98 0.0021 28.8 3.6 58 74-134 82-146 (1081)
493 PF14727 PHTB1_N: PTHB1 N-term 24.3 4.5E+02 0.0098 22.4 13.1 118 12-134 174-319 (418)
494 KOG2041|consensus 22.1 6.7E+02 0.015 23.6 10.2 96 27-133 231-337 (1189)
495 PHA02584 34 long tail fiber, p 21.6 6.4E+02 0.014 24.8 8.3 64 78-141 236-308 (1229)
496 cd06470 ACD_IbpA-B_like Alpha- 21.5 1.3E+02 0.0027 19.4 3.0 31 2-39 56-86 (90)
497 PRK08868 flagellar protein Fla 21.2 83 0.0018 22.9 2.1 18 82-99 103-120 (144)
498 PF11134 Phage_stabilise: Phag 21.2 5.5E+02 0.012 22.3 7.3 64 63-135 54-119 (469)
499 COG5354 Uncharacterized protei 21.1 2.2E+02 0.0048 25.1 5.0 78 62-144 32-127 (561)
500 PF10433 MMS1_N: Mono-function 21.1 5.3E+02 0.011 22.0 13.8 63 72-137 418-480 (504)
No 1
>KOG3522|consensus
Probab=99.81 E-value=2.3e-20 Score=162.32 Aligned_cols=145 Identities=26% Similarity=0.417 Sum_probs=134.7
Q ss_pred CCceeeeeeCC--CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCe
Q psy16020 5 HPTPYPLNKIL--DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNK 82 (151)
Q Consensus 5 ~~~~l~~i~l~--~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~ 82 (151)
.++++.+-.-| .++.++.+..+.+++|+-||++++|-|..+|.||.+.+..++++. .||+..++.++.+|+++|++
T Consensus 569 ~ke~~~~~~spe~~~v~~l~~ss~Slgagl~dgt~a~y~rap~gSwd~ep~~~~~~g~--lPvrsla~~ed~~was~gG~ 646 (925)
T KOG3522|consen 569 IKEVTSEPPSPEHESVKLLLFSSGSLGAGLIDGTLAVYGRAPSGSWDGEPNISIPTGS--LPVRSLAFQEDFVWASEGGC 646 (925)
T ss_pred ccceeccCCCCchhhhhhhhccccccccCccCCccccccCCCCCCCCCCCccccccCC--ccccchhhhhceeeeecCCc
Confidence 34555555555 589999999999999999999999999999999999777889998 99999999999999999999
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccccccC
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 151 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~~~l 151 (151)
|+||..+|...++..++|......|++|.+.++|||+++.....++++|++|+.++|+||++..++.||
T Consensus 647 V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhtetl~hlqd~niaT~vt~~l 715 (925)
T KOG3522|consen 647 VHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTETLWHLQDSNIATSVTVDL 715 (925)
T ss_pred eEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEecccccCCccccccCcceeecC
Confidence 999999999999999999888889999999999999999999999999999999999999999998875
No 2
>KOG0649|consensus
Probab=99.60 E-value=2.3e-14 Score=111.18 Aligned_cols=126 Identities=17% Similarity=0.214 Sum_probs=102.4
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCC-------CCCCCCCcceEEEeCCCCCceEEEeee--CCE-EEEEeCCeEEE
Q psy16020 16 DTALPPVHVQGRVVCALADGSVAIFRRGP-------DGQWDLSKYHTVTLGLPHHSVRSLAAV--YNK-VWCGYKNKIHV 85 (151)
Q Consensus 16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~-------~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~-Lw~g~~n~I~v 85 (151)
.+|+++.+++..+..|. ||.|..|.|++ ...|....|....... -..|++|.+. +|. +.+|-++.+|-
T Consensus 63 gpiy~~~f~d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~e-vPeINam~ldP~enSi~~AgGD~~~y~ 140 (325)
T KOG0649|consen 63 GPIYYLAFHDDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVE-VPEINAMWLDPSENSILFAGGDGVIYQ 140 (325)
T ss_pred CCeeeeeeehhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCccc-CCccceeEeccCCCcEEEecCCeEEEE
Confidence 49999999987777766 89999999974 3358888877664322 2668999997 344 55665568999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEE-eCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTW-AGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 148 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~-~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~ 148 (151)
+|.++|++++++.+|+| +|++++. ..++--+|+++|+++|+||++|.++.+.| +++.+
T Consensus 141 ~dlE~G~i~r~~rGHtD---YvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~i--e~yk~ 199 (325)
T KOG0649|consen 141 VDLEDGRIQREYRGHTD---YVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMI--EPYKN 199 (325)
T ss_pred EEecCCEEEEEEcCCcc---eeeeeeecccCcceeecCCCccEEEEeccccceeEEe--ccccC
Confidence 99999999999999998 9999988 45566779999999999999999999999 55544
No 3
>KOG0274|consensus
Probab=99.33 E-value=2.7e-11 Score=104.28 Aligned_cols=129 Identities=15% Similarity=0.101 Sum_probs=109.2
Q ss_pred CCCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeCCEEEEEeC
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYNKVWCGYK 80 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~~~Lw~g~~ 80 (151)
..+.+|.+.+... ++|.||.-.+..+.-|..|-+|.||+.. ++..+.+-. +..||+||...++.+..|+.
T Consensus 278 ~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~--------n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~ 349 (537)
T KOG0274|consen 278 CSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVT--------NGACLNLLRGHTGPVNCVQLDEPLLVSGSY 349 (537)
T ss_pred cCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEecc--------CcceEEEeccccccEEEEEecCCEEEEEec
Confidence 5688999999955 7888888888777777889999998764 455555433 67999999999999999994
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcc-ceeeeEe
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY-QHLQDVD 142 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~-~~l~~id 142 (151)
+.|.|||+.++++++++.+|+. .|.++.+.+....+|++-|.+|++||.++. ++++.+.
T Consensus 350 d~~v~VW~~~~~~cl~sl~gH~~---~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~ 410 (537)
T KOG0274|consen 350 DGTVKVWDPRTGKCLKSLSGHTG---RVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQ 410 (537)
T ss_pred CceEEEEEhhhceeeeeecCCcc---eEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhc
Confidence 6899999999999999999986 999998876577889999999999999998 7776653
No 4
>PTZ00421 coronin; Provisional
Probab=99.32 E-value=2.2e-10 Score=97.96 Aligned_cols=123 Identities=15% Similarity=0.185 Sum_probs=97.3
Q ss_pred CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCC-CCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-CCeEEEEe
Q psy16020 16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQ-WDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-KNKIHVVD 87 (151)
Q Consensus 16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~-wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid 87 (151)
++|.++.+.+ +.+++|..||+|.+|+...++. .+...+ ...+..+..+|.++.+.. +.|..|+ ++.|.+||
T Consensus 76 ~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~-l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWD 154 (493)
T PTZ00421 76 GPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDP-IVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWD 154 (493)
T ss_pred CCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcc-eEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEE
Confidence 6899999975 4688999999999999865431 111111 234555569999999973 4577766 46899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.++++....+.+|.+ .|.++.++++| ..++++.|+.|++||.++.+.+.++.
T Consensus 155 l~tg~~~~~l~~h~~---~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~ 207 (493)
T PTZ00421 155 VERGKAVEVIKCHSD---QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVE 207 (493)
T ss_pred CCCCeEEEEEcCCCC---ceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 999999999999976 89999998665 47899999999999999999888775
No 5
>KOG3522|consensus
Probab=99.30 E-value=6.8e-12 Score=110.10 Aligned_cols=132 Identities=17% Similarity=0.269 Sum_probs=120.3
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLK 95 (151)
Q Consensus 16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~ 95 (151)
.+|.+|.|.++.||+++++|+..+|. ...+.|++++-...+.+....|++.|.-+++++|| .|.|.|.+..|+.+..
T Consensus 669 ~~Vthm~~~~~gVwvafasG~~~rlf-htetl~hlqd~niaT~vt~~lP~~kllsv~~rl~c--~gl~~V~~~~~l~v~~ 745 (925)
T KOG3522|consen 669 HSVTHMLYLDNGVWVAFASGDEERLF-HTETLWHLQDSNIATSVTVDLPFGKLLSVPGRLWC--QGLLMVLTSLTLLVAL 745 (925)
T ss_pred ceEEEEEeeCCceEEEEcCCCEEEEe-cccccCCccccccCcceeecCCCcccccCCCcccc--cceeEEeccceeEEEe
Confidence 48999999999999999999999998 67778988777666665545999999999999999 9999999999999999
Q ss_pred EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccccccC
Q psy16020 96 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 151 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~~~l 151 (151)
.+..-.+ ...+.+|..+..+||++...+..+..+|..|++...+.+..|++++||
T Consensus 746 ~v~~~q~-~k~~~~~~vS~~~~~~~vk~~~~~~~~H~~~~~~~~e~~~~~p~~~~~ 800 (925)
T KOG3522|consen 746 PVPRLQD-SKVTGRMMVSYHAVWSPVKFSAHATALHEKTKDKSREVLAPPPVPQML 800 (925)
T ss_pred eeeeccC-CceeeeeeeecccccccchhhhhhhhhccchHhhhhhccCCCCCchhh
Confidence 9998777 677999999999999999999999999999999999999999999996
No 6
>KOG1539|consensus
Probab=99.24 E-value=2.8e-11 Score=105.97 Aligned_cols=124 Identities=25% Similarity=0.412 Sum_probs=101.8
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEEcCC----------------------------------CC---CCCCCcce---EE
Q psy16020 17 TALPPVHVQGRVVCALADGSVAIFRRGP----------------------------------DG---QWDLSKYH---TV 56 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~----------------------------------~~---~wd~~~~~---~i 56 (151)
...|+.+++|.+|+|.++|+|-+|...+ +| .||+.... .+
T Consensus 452 ~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l 531 (910)
T KOG1539|consen 452 TAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSL 531 (910)
T ss_pred EEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeee
Confidence 4556778899999999999999997653 11 47776543 23
Q ss_pred EeCCCCCceEEEeee--CCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeC
Q psy16020 57 TLGLPHHSVRSLAAV--YNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNA 132 (151)
Q Consensus 57 ~l~~~~~pV~~m~~v--~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~ 132 (151)
.++ .++.+|... .+-+.++|+. .|.++|..|.++.|.|.+|++ .|+.|.++++|-| ++.+.|++||+||.
T Consensus 532 ~l~---~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~n---ritd~~FS~DgrWlisasmD~tIr~wDl 605 (910)
T KOG1539|consen 532 RLG---SSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGN---RITDMTFSPDGRWLISASMDSTIRTWDL 605 (910)
T ss_pred ccC---CCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcccc---ceeeeEeCCCCcEEEEeecCCcEEEEec
Confidence 344 688899886 3568888987 799999999999999999997 9999999999996 68889999999999
Q ss_pred CccceeeeEeCCcc
Q psy16020 133 HTYQHLQDVDIEPY 146 (151)
Q Consensus 133 ~t~~~l~~idi~~~ 146 (151)
-|..++--+-+..+
T Consensus 606 pt~~lID~~~vd~~ 619 (910)
T KOG1539|consen 606 PTGTLIDGLLVDSP 619 (910)
T ss_pred cCcceeeeEecCCc
Confidence 99999887766544
No 7
>KOG0274|consensus
Probab=99.21 E-value=1.6e-10 Score=99.55 Aligned_cols=131 Identities=17% Similarity=0.165 Sum_probs=109.1
Q ss_pred CCCCCceeeeee-CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe
Q psy16020 2 EYPHPTPYPLNK-ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY 79 (151)
Q Consensus 2 ~~~~~~~l~~i~-l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~ 79 (151)
+++.+++++-+. ..++|.|+.+.++.+|.|..||+|.||+.... + ..-.+..+...|.++.+-. +.++-|+
T Consensus 317 ~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~-----~--cl~sl~gH~~~V~sl~~~~~~~~~Sgs 389 (537)
T KOG0274|consen 317 DVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTG-----K--CLKSLSGHTGRVYSLIVDSENRLLSGS 389 (537)
T ss_pred eccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEhhhc-----e--eeeeecCCcceEEEEEecCcceEEeee
Confidence 356789999999 67999999999999999999999999987511 1 1224444669999997777 7888887
Q ss_pred -CCeEEEEeCCCC-cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 80 -KNKIHVVDPKSL-VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 80 -~n~I~vid~~t~-~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
+..|.+||.+++ ++..++.+|+. .+..|.+.+.- ++|.+-|++|++||..++++++.+.-
T Consensus 390 ~D~~IkvWdl~~~~~c~~tl~~h~~---~v~~l~~~~~~-Lvs~~aD~~Ik~WD~~~~~~~~~~~~ 451 (537)
T KOG0274|consen 390 LDTTIKVWDLRTKRKCIHTLQGHTS---LVSSLLLRDNF-LVSSSADGTIKLWDAEEGECLRTLEG 451 (537)
T ss_pred eccceEeecCCchhhhhhhhcCCcc---cccccccccce-eEeccccccEEEeecccCceeeeecc
Confidence 667999999999 99999999975 67777775444 88999999999999999999999864
No 8
>KOG0281|consensus
Probab=99.18 E-value=2.7e-11 Score=98.12 Aligned_cols=134 Identities=15% Similarity=0.182 Sum_probs=104.0
Q ss_pred CCCceeeeee-CCCceeeeEEeCCeEEEEecCCcEEEEEcCCC--------------------------------CCCCC
Q psy16020 4 PHPTPYPLNK-ILDTALPPVHVQGRVVCALADGSVAIFRRGPD--------------------------------GQWDL 50 (151)
Q Consensus 4 ~~~~~l~~i~-l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~--------------------------------~~wd~ 50 (151)
.+.+|+..+. ...+|+||-|.+.-+..|.+|.+|.||+++.+ ..||.
T Consensus 225 n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm 304 (499)
T KOG0281|consen 225 NSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDM 304 (499)
T ss_pred ccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEec
Confidence 3455555554 34799999999987888889999999998732 24777
Q ss_pred CcceEEEe----CCCCCceEEEeeeCCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCC
Q psy16020 51 SKYHTVTL----GLPHHSVRSLAAVYNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS 125 (151)
Q Consensus 51 ~~~~~i~l----~~~~~pV~~m~~v~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~ 125 (151)
..|..+.+ -.+...|+.+.+-++.+-.|+|+ +|.+||+.|++..+++.+|.+ .|-|+.+- +...+|++.|.
T Consensus 305 ~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkR---GIAClQYr-~rlvVSGSSDn 380 (499)
T KOG0281|consen 305 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR---GIACLQYR-DRLVVSGSSDN 380 (499)
T ss_pred cCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccc---cceehhcc-CeEEEecCCCc
Confidence 66654432 11347777777777777778876 799999999999999999986 89998885 55578999999
Q ss_pred eEEEEeCCccceeeeE
Q psy16020 126 TLRMYNAHTYQHLQDV 141 (151)
Q Consensus 126 ~l~lwd~~t~~~l~~i 141 (151)
+||+||++.+.+|.-+
T Consensus 381 tIRlwdi~~G~cLRvL 396 (499)
T KOG0281|consen 381 TIRLWDIECGACLRVL 396 (499)
T ss_pred eEEEEeccccHHHHHH
Confidence 9999999998877543
No 9
>KOG0306|consensus
Probab=99.17 E-value=3.8e-10 Score=98.30 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=104.8
Q ss_pred eeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CE-EEEEeCC-eEE
Q psy16020 10 PLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NK-VWCGYKN-KIH 84 (151)
Q Consensus 10 ~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~-Lw~g~~n-~I~ 84 (151)
+.++|++.|+|+.+. +..+-|||-|.++-||-.+ .....+.|..++-||+||.+.. ++ +-.|+.+ +|.
T Consensus 503 rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflD-------tlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVK 575 (888)
T KOG0306|consen 503 RTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLD-------TLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVK 575 (888)
T ss_pred eEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEec-------ceeeeeeecccccceeEEeccCCcCeEEeccCCCceE
Confidence 678899999999998 4579999999999999886 1224678888899999999974 44 4445544 799
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
||-++=|.+-++|-||.| +|.++.+.+..- +.|+++|+.++=||...++++|.++
T Consensus 576 iWGLdFGDCHKS~fAHdD---Svm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~ 631 (888)
T KOG0306|consen 576 IWGLDFGDCHKSFFAHDD---SVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLD 631 (888)
T ss_pred EeccccchhhhhhhcccC---ceeEEEEcccceeEEEecCcceEEeechhhhhhheeec
Confidence 999999999999999987 888888887644 7799999999999999999999986
No 10
>KOG0271|consensus
Probab=99.14 E-value=4.4e-10 Score=91.90 Aligned_cols=125 Identities=17% Similarity=0.208 Sum_probs=96.4
Q ss_pred eeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee------CCEEEEE
Q psy16020 8 PYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV------YNKVWCG 78 (151)
Q Consensus 8 ~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v------~~~Lw~g 78 (151)
++...|=+ .=|+|+...++ .+-.|.-||+|.+|+...+++ .--.|..++.+|++++.- +.+..++
T Consensus 149 p~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~------~g~~l~gH~K~It~Lawep~hl~p~~r~las 222 (480)
T KOG0271|consen 149 PLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQ------IGRALRGHKKWITALAWEPLHLVPPCRRLAS 222 (480)
T ss_pred cceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCc------ccccccCcccceeEEeecccccCCCccceec
Confidence 33344423 46788877654 577788899999998765432 122455567999999884 2343344
Q ss_pred e--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 79 Y--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 79 ~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+ +|.|+|||+.-++++..+.+|+. +|+|+...|+|...|++.|.+|++|++..+.++.++
T Consensus 223 ~skDg~vrIWd~~~~~~~~~lsgHT~---~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~l 284 (480)
T KOG0271|consen 223 SSKDGSVRIWDTKLGTCVRTLSGHTA---SVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCREL 284 (480)
T ss_pred ccCCCCEEEEEccCceEEEEeccCcc---ceEEEEEcCCceEEecCCCceEEEEEccchhHHHhh
Confidence 3 47999999999999999999997 999999999999999999999999999987776655
No 11
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.14 E-value=4.2e-09 Score=78.89 Aligned_cols=128 Identities=19% Similarity=0.196 Sum_probs=95.5
Q ss_pred CCceeeeee-CCCceeeeEEeC-CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC--EEEEEe
Q psy16020 5 HPTPYPLNK-ILDTALPPVHVQ-GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGY 79 (151)
Q Consensus 5 ~~~~l~~i~-l~~~V~~i~~~~-~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~--~Lw~g~ 79 (151)
..+++..++ .++.|.++.+.+ +.++++.. +|.|.+|+.... +....+. .+..+|+++.+..+ .+++++
T Consensus 124 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~-----~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~ 196 (289)
T cd00200 124 TGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG-----KCVATLT--GHTGEVNSVAFSPDGEKLLSSS 196 (289)
T ss_pred CcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcccc-----ccceeEe--cCccccceEEECCCcCEEEEec
Confidence 345566666 346899999987 45555555 999999987521 1222333 23379999999864 788887
Q ss_pred -CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 80 -KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 80 -~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
++.|++||..+++..+.+..|.. .|.++.+.+++. +++++.++.|++||..+.+.+..+.
T Consensus 197 ~~~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 258 (289)
T cd00200 197 SDGTIKLWDLSTGKCLGTLRGHEN---GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS 258 (289)
T ss_pred CCCcEEEEECCCCceecchhhcCC---ceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc
Confidence 56899999999999999987864 899999998655 5555559999999999888887775
No 12
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.12 E-value=9.5e-09 Score=76.94 Aligned_cols=125 Identities=15% Similarity=0.142 Sum_probs=93.5
Q ss_pred ceeeeeeCC-CceeeeEEeCC-eEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-C
Q psy16020 7 TPYPLNKIL-DTALPPVHVQG-RVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-K 80 (151)
Q Consensus 7 ~~l~~i~l~-~~V~~i~~~~~-~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~ 80 (151)
+.+..++-+ ..|.++.+.++ +++++.+ +|.|.+|+.... +... .+..+..+|+++.+.. ..+.+++ +
T Consensus 84 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~ 156 (289)
T cd00200 84 ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG-----KCLT--TLRGHTDWVNSVAFSPDGTFVASSSQD 156 (289)
T ss_pred cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc-----EEEE--EeccCCCcEEEEEEcCcCCEEEEEcCC
Confidence 455566554 48999998764 4555555 999999987521 1222 2223347899999976 3466666 6
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+.|++||.++++..+.+..|.. .|.++.+.+++ ..++++.++.|++||.++.+.+..+
T Consensus 157 ~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~ 215 (289)
T cd00200 157 GTIKLWDLRTGKCVATLTGHTG---EVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTL 215 (289)
T ss_pred CcEEEEEccccccceeEecCcc---ccceEEECCCcCEEEEecCCCcEEEEECCCCceecch
Confidence 7999999999999999998854 89999999886 5667777999999999988887776
No 13
>KOG0291|consensus
Probab=99.10 E-value=5.4e-09 Score=91.27 Aligned_cols=131 Identities=17% Similarity=0.224 Sum_probs=107.7
Q ss_pred CCCCCceeeeeeCC-CceeeeEEe--CCeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC--EE
Q psy16020 2 EYPHPTPYPLNKIL-DTALPPVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KV 75 (151)
Q Consensus 2 ~~~~~~~l~~i~l~-~~V~~i~~~--~~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~--~L 75 (151)
|+|.-.++|++.+. .+|..+..+ ++.+-+|.+. |+|.||+|.+ +...++...+...++||++..+ .+
T Consensus 293 elP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs-------EsYVlKQQgH~~~i~~l~YSpDgq~i 365 (893)
T KOG0291|consen 293 ELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS-------ESYVLKQQGHSDRITSLAYSPDGQLI 365 (893)
T ss_pred ecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeec-------cceeeeccccccceeeEEECCCCcEE
Confidence 68889999999999 699999887 6777777655 8999999862 4456676655689999999864 58
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
..|++ ++|+|||..++-+.-+|.-|+. .|+.+.+. ...+.+|.+-|+++|.||..-|..-.++-
T Consensus 366 aTG~eDgKVKvWn~~SgfC~vTFteHts---~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft 431 (893)
T KOG0291|consen 366 ATGAEDGKVKVWNTQSGFCFVTFTEHTS---GVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFT 431 (893)
T ss_pred EeccCCCcEEEEeccCceEEEEeccCCC---ceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeec
Confidence 88885 7999999999999999999985 78888777 34558899999999999999877766664
No 14
>PTZ00420 coronin; Provisional
Probab=99.06 E-value=3e-08 Score=86.12 Aligned_cols=130 Identities=7% Similarity=0.057 Sum_probs=94.7
Q ss_pred eeeeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCC--CCCCcceEEEeCCCCCceEEEeeeC--CEE-EEE
Q psy16020 8 PYPLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQ--WDLSKYHTVTLGLPHHSVRSLAAVY--NKV-WCG 78 (151)
Q Consensus 8 ~l~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~--wd~~~~~~i~l~~~~~pV~~m~~v~--~~L-w~g 78 (151)
++..++-+ ++|.++.+++ +.+..|..||+|.+|+...++. -....+ ...+..+..+|+++.+.. ..+ ..|
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p-~~~L~gH~~~V~sVaf~P~g~~iLaSg 144 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDP-QCILKGHKKKISIIDWNPMNYYIMCSS 144 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccc-eEEeecCCCcEEEEEECCCCCeEEEEE
Confidence 44445433 7999999975 4688999999999999864331 111111 123444568999999985 333 444
Q ss_pred e-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 79 Y-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 79 ~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+ ++.|.+||.++++...++. |.. .|.++.++.+|- +++++.|+.|++||.++.+.++++.
T Consensus 145 S~DgtIrIWDl~tg~~~~~i~-~~~---~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~ 206 (568)
T PTZ00420 145 GFDSFVNIWDIENEKRAFQIN-MPK---KLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFH 206 (568)
T ss_pred eCCCeEEEEECCCCcEEEEEe-cCC---cEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 4 5799999999999888886 433 799999986655 5667789999999999999888774
No 15
>KOG0266|consensus
Probab=99.05 E-value=8.2e-09 Score=87.36 Aligned_cols=117 Identities=19% Similarity=0.242 Sum_probs=91.1
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCC
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t 90 (151)
..|.++.+.++ ++..|..|++|.+|+...++ ...+ .+-.+..+|+|+.+.. +.+..|++ +.|++||.++
T Consensus 204 ~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~----~~~~--~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~ 277 (456)
T KOG0266|consen 204 RGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG----RNLK--TLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT 277 (456)
T ss_pred cceeeeEECCCCcEEEEecCCceEEEeeccCCC----eEEE--EecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC
Confidence 58888888654 68888888999999884222 2223 3334569999999974 45666664 5899999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc--eeeeE
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ--HLQDV 141 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~--~l~~i 141 (151)
+++.+.+++|++ .|+.+.+.+++- .++.+.|+.|++||..+++ ++.++
T Consensus 278 ~~~~~~l~~hs~---~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~ 328 (456)
T KOG0266|consen 278 GECVRKLKGHSD---GISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLL 328 (456)
T ss_pred CeEEEeeeccCC---ceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecc
Confidence 999999999986 899999996654 6677889999999999998 34444
No 16
>KOG0316|consensus
Probab=99.02 E-value=6.8e-09 Score=80.62 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=97.4
Q ss_pred eeeeeeCC-CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee-CCEEEEEeCC-
Q psy16020 8 PYPLNKIL-DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV-YNKVWCGYKN- 81 (151)
Q Consensus 8 ~l~~i~l~-~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v-~~~Lw~g~~n- 81 (151)
.++.++-. .+|....|+ +|+..++..|-+|..|....+ ..+ +...+...|.-.+.. ++.=.|+||+
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg--------~liktYsghG~EVlD~~~s~Dnskf~s~GgD 80 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG--------ALIKTYSGHGHEVLDAALSSDNSKFASCGGD 80 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeeccccc--------ceeeeecCCCceeeeccccccccccccCCCC
Confidence 45556544 699999995 678999999999999865321 123 333344777777776 4667777763
Q ss_pred -eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCc--cceeeeEeC
Q psy16020 82 -KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHT--YQHLQDVDI 143 (151)
Q Consensus 82 -~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t--~~~l~~idi 143 (151)
.|++||.+||++.++|-+|- .+|+.+.+-. ..|.+|++-|+.+|+||.++ ++++|.+|-
T Consensus 81 k~v~vwDV~TGkv~Rr~rgH~---aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQilde 143 (307)
T KOG0316|consen 81 KAVQVWDVNTGKVDRRFRGHL---AQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDE 143 (307)
T ss_pred ceEEEEEcccCeeeeeccccc---ceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhh
Confidence 59999999999999999996 4999999984 46799999999999999986 899998864
No 17
>KOG0276|consensus
Probab=99.00 E-value=4.7e-09 Score=90.22 Aligned_cols=109 Identities=17% Similarity=0.228 Sum_probs=89.6
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEeCC-eEEEEeCCC
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGYKN-KIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~~n-~I~vid~~t 90 (151)
+.|-++-.++- -+.++|=||++.+|+... -...+.+.+.+ .|||+-.++..+ +-+|+++ +|.|+|-.|
T Consensus 14 dRVKsVd~HPtePw~la~LynG~V~IWnyet-----qtmVksfeV~~--~PvRa~kfiaRknWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 14 DRVKSVDFHPTEPWILAALYNGDVQIWNYET-----QTMVKSFEVSE--VPVRAAKFIARKNWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred CceeeeecCCCCceEEEeeecCeeEEEeccc-----ceeeeeeeecc--cchhhheeeeccceEEEecCCceEEEEeccc
Confidence 56777766654 599999999999998752 12346678877 999999999755 5566665 899999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t 134 (151)
++-.++|++|+| .|.++++-+.. -.+|.++|.+|++||.+.
T Consensus 87 ~ekV~~FeAH~D---yIR~iavHPt~P~vLtsSDDm~iKlW~we~ 128 (794)
T KOG0276|consen 87 GEKVKTFEAHSD---YIRSIAVHPTLPYVLTSSDDMTIKLWDWEN 128 (794)
T ss_pred ceeeEEeecccc---ceeeeeecCCCCeEEecCCccEEEEeeccC
Confidence 999999999998 99999998663 378999999999999884
No 18
>KOG0310|consensus
Probab=98.98 E-value=4.3e-09 Score=87.83 Aligned_cols=128 Identities=15% Similarity=0.168 Sum_probs=99.2
Q ss_pred eCCCceeeeEEe-CCeEE-EEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee--CCEEEEEeC-C-eEEE
Q psy16020 13 KILDTALPPVHV-QGRVV-CALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGYK-N-KIHV 85 (151)
Q Consensus 13 ~l~~~V~~i~~~-~~~v~-vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v--~~~Lw~g~~-n-~I~v 85 (151)
+.++.|.+..+. +|+++ +|-+.|.|-||+.++ ...+ .+..++.||+..-+. ++++.+.++ + .+..
T Consensus 66 rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~--------r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~ 137 (487)
T KOG0310|consen 66 RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS--------RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKY 137 (487)
T ss_pred hhccceeEEEeecCCeEEEccCCcCcEEEecccc--------HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEE
Confidence 355778888775 45555 555679999998531 1111 344467999998886 577666653 3 6999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCcc-ceeeeEeCCccccccC
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTY-QHLQDVDIEPYVSKML 151 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~-~~l~~idi~~~v~~~l 151 (151)
||+.+..++..+.+|+| +|.|..+++. .+.+|++.|+.||+||+++. +...++|...+|..+|
T Consensus 138 ~d~s~a~v~~~l~~htD---YVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl 203 (487)
T KOG0310|consen 138 WDLSTAYVQAELSGHTD---YVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVL 203 (487)
T ss_pred EEcCCcEEEEEecCCcc---eeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEE
Confidence 99999998779999998 9999998843 47899999999999999998 9999999999988764
No 19
>KOG0316|consensus
Probab=98.98 E-value=5.4e-09 Score=81.18 Aligned_cols=128 Identities=15% Similarity=0.148 Sum_probs=98.9
Q ss_pred Cceeeeee-CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CC
Q psy16020 6 PTPYPLNK-ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KN 81 (151)
Q Consensus 6 ~~~l~~i~-l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n 81 (151)
.++++-+. -.|.|.+|.-.+..+.+|..||++..|+... |+- .-.--. .||+|+.+.. +.+-+|| +.
T Consensus 135 ~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~-G~l------~sDy~g--~pit~vs~s~d~nc~La~~l~s 205 (307)
T KOG0316|consen 135 FEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRK-GTL------SSDYFG--HPITSVSFSKDGNCSLASSLDS 205 (307)
T ss_pred CCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeec-cee------ehhhcC--CcceeEEecCCCCEEEEeeccc
Confidence 44555553 4489999999999999999999999998753 311 111112 8999999974 6688888 67
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.++.+|-+||+++++..+|.+.+-.+.|-..-.+.-.+|+++|+.+.+||......+..+.
T Consensus 206 tlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~ 266 (307)
T KOG0316|consen 206 TLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLS 266 (307)
T ss_pred eeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeec
Confidence 8999999999999999999986666666444455667899999999999998766665553
No 20
>KOG0285|consensus
Probab=98.97 E-value=5e-09 Score=85.25 Aligned_cols=126 Identities=14% Similarity=0.129 Sum_probs=101.4
Q ss_pred CCCceeeeeeCCCceeeeEEe------------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee
Q psy16020 4 PHPTPYPLNKILDTALPPVHV------------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV 71 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~------------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v 71 (151)
.+...+|-|+-.++|..|.-+ +.+|+.|.-|++|..|+..++. ..+.+-.++.+||||..+
T Consensus 256 Dst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk-------t~~tlt~hkksvral~lh 328 (460)
T KOG0285|consen 256 DSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK-------TMITLTHHKKSVRALCLH 328 (460)
T ss_pred cceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCc-------eeEeeecccceeeEEecC
Confidence 456778888888877777532 5589999999999999876432 345666677999999998
Q ss_pred CCE-EEEE-eCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020 72 YNK-VWCG-YKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 72 ~~~-Lw~g-~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
.++ ++++ |.+.|.-|+..-+...+.+++|+. -|++|....++|++++++.+.+..||.+++-.-|
T Consensus 329 P~e~~fASas~dnik~w~~p~g~f~~nlsgh~~---iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ 395 (460)
T KOG0285|consen 329 PKENLFASASPDNIKQWKLPEGEFLQNLSGHNA---IINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQ 395 (460)
T ss_pred CchhhhhccCCccceeccCCccchhhccccccc---eeeeeeeccCceEEEcCCceEEEEEecCcCcccc
Confidence 654 4544 458999999999999999999975 8999999999999999999999999999843333
No 21
>KOG0266|consensus
Probab=98.96 E-value=3.8e-08 Score=83.34 Aligned_cols=130 Identities=18% Similarity=0.170 Sum_probs=103.8
Q ss_pred CCceeeeee-CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020 5 HPTPYPLNK-ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY 79 (151)
Q Consensus 5 ~~~~l~~i~-l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~ 79 (151)
..++++.++ .++.|+++.+.+ +.+..|..||++.+|+... | +. .-.+..+..+|+++.+.. +.|++|+
T Consensus 235 ~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~-~----~~--~~~l~~hs~~is~~~f~~d~~~l~s~s 307 (456)
T KOG0266|consen 235 DGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT-G----EC--VRKLKGHSDGISGLAFSPDGNLLVSAS 307 (456)
T ss_pred CCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC-C----eE--EEeeeccCCceEEEEECCCCCEEEEcC
Confidence 346788886 458999999964 4799999999999998763 1 11 223444458999999973 6699888
Q ss_pred -CCeEEEEeCCCCc--EEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 80 -KNKIHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 80 -~n~I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
++.|++||..+++ +.+.+..+.... .+++..+++++. .++...|+.+++||..+.+.+.+..
T Consensus 308 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~ 373 (456)
T KOG0266|consen 308 YDGTIRVWDLETGSKLCLKLLSGAENSA-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYT 373 (456)
T ss_pred CCccEEEEECCCCceeeeecccCCCCCC-ceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeec
Confidence 5789999999999 678888887644 799999998887 6788889999999999988887774
No 22
>KOG0315|consensus
Probab=98.94 E-value=2.5e-08 Score=77.98 Aligned_cols=125 Identities=10% Similarity=0.114 Sum_probs=97.5
Q ss_pred CCCCCceeeeeeCC-CceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE-EEE
Q psy16020 2 EYPHPTPYPLNKIL-DTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWC 77 (151)
Q Consensus 2 ~~~~~~~l~~i~l~-~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~-Lw~ 77 (151)
|-.+..|...|+-+ ++|..|.-.+. +.+++.++-.|.+|+.++... .| ......+...|+.+.+. +++ +|.
T Consensus 26 qa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np----~P-v~t~e~h~kNVtaVgF~~dgrWMyT 100 (311)
T KOG0315|consen 26 QALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNP----NP-VATFEGHTKNVTAVGFQCDGRWMYT 100 (311)
T ss_pred ehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCC----Cc-eeEEeccCCceEEEEEeecCeEEEe
Confidence 34678999999999 58988877654 567777799999999975321 12 22333344889998886 455 888
Q ss_pred EeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcc
Q psy16020 78 GYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~ 135 (151)
|++ +.++|||.+++++++.|+ |. ++|++++.-++ +=++++.+++.|++||..+-
T Consensus 101 gseDgt~kIWdlR~~~~qR~~~-~~---spVn~vvlhpnQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 101 GSEDGTVKIWDLRSLSCQRNYQ-HN---SPVNTVVLHPNQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred cCCCceEEEEeccCcccchhcc-CC---CCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence 885 699999999999999998 54 49999998865 44999999999999999864
No 23
>KOG0308|consensus
Probab=98.92 E-value=1.6e-08 Score=87.09 Aligned_cols=132 Identities=17% Similarity=0.187 Sum_probs=98.5
Q ss_pred ceeeeeeCC-CceeeeEE-eCC--eEEEEecCCcEEEEEcCCCCC---CCCCcceEEEeC-CCCCceEEEeeeC-CEEEE
Q psy16020 7 TPYPLNKIL-DTALPPVH-VQG--RVVCALADGSVAIFRRGPDGQ---WDLSKYHTVTLG-LPHHSVRSLAAVY-NKVWC 77 (151)
Q Consensus 7 ~~l~~i~l~-~~V~~i~~-~~~--~v~vgl~nG~l~v~~~~~~~~---wd~~~~~~i~l~-~~~~pV~~m~~v~-~~Lw~ 77 (151)
=|+..|+-+ |.|.||.| .++ .+-.|+-|+.|.+|+.+.+.. -.++....-.++ +++.||.+++... +.+.+
T Consensus 108 ~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~iv 187 (735)
T KOG0308|consen 108 FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIV 187 (735)
T ss_pred hhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEE
Confidence 466667644 89999999 433 344556689999999975421 011111222344 5679999999986 45555
Q ss_pred EeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 78 GYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 78 g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+.| +-+.+||++|.+-.-.+.+|++ -|.++....+|- .+|++.|++|||||....++++++
T Consensus 188 sGgtek~lr~wDprt~~kimkLrGHTd---NVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~ 251 (735)
T KOG0308|consen 188 SGGTEKDLRLWDPRTCKKIMKLRGHTD---NVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATY 251 (735)
T ss_pred ecCcccceEEeccccccceeeeecccc---ceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeE
Confidence 544 5699999999998888889998 899999997775 889999999999999988888876
No 24
>KOG0291|consensus
Probab=98.91 E-value=3.2e-08 Score=86.61 Aligned_cols=129 Identities=20% Similarity=0.349 Sum_probs=93.9
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCC-------------------------------CC---CCCCCcceEEEeC
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGP-------------------------------DG---QWDLSKYHTVTLG 59 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~-------------------------------~~---~wd~~~~~~i~l~ 59 (151)
+.+.|+.|.++ .+-+|..||.|.||+-.+ || .||+..+..+.-.
T Consensus 351 ~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTf 430 (893)
T KOG0291|consen 351 DRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTF 430 (893)
T ss_pred cceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeee
Confidence 46778888766 677788888888886653 33 4788777776655
Q ss_pred CCCCceE--EEeee--CCEEEEEeCC--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeC
Q psy16020 60 LPHHSVR--SLAAV--YNKVWCGYKN--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNA 132 (151)
Q Consensus 60 ~~~~pV~--~m~~v--~~~Lw~g~~n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~ 132 (151)
..+.|+. |++.- ++-+.+|..+ .|+||+.+|||++..+.+|+ .+|.++.+++.+ +++|++-|.+||+||.
T Consensus 431 t~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHE---gPVs~l~f~~~~~~LaS~SWDkTVRiW~i 507 (893)
T KOG0291|consen 431 TSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHE---GPVSGLSFSPDGSLLASGSWDKTVRIWDI 507 (893)
T ss_pred cCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCC---CcceeeEEccccCeEEeccccceEEEEEe
Confidence 4446663 44442 3445666655 59999999999999999996 499998887554 4999999999999999
Q ss_pred Ccc-ceeeeEeCCccc
Q psy16020 133 HTY-QHLQDVDIEPYV 147 (151)
Q Consensus 133 ~t~-~~l~~idi~~~v 147 (151)
-.. ....++++.+.+
T Consensus 508 f~s~~~vEtl~i~sdv 523 (893)
T KOG0291|consen 508 FSSSGTVETLEIRSDV 523 (893)
T ss_pred eccCceeeeEeeccce
Confidence 753 355566555433
No 25
>KOG0639|consensus
Probab=98.91 E-value=2.1e-09 Score=90.54 Aligned_cols=110 Identities=18% Similarity=0.281 Sum_probs=83.8
Q ss_pred CeEEEEecCCcEEEEEcCCCCCCCCCcceEEE--eCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCCCcEEEEEEec
Q psy16020 26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT--LGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~--l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h 100 (151)
+.+++|..-.+|.||+..+ +...|+ +-.+..-+..+++. +.+|..+| +++|.|||+.+-...++|++|
T Consensus 478 rtLivGGeastlsiWDLAa-------pTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGh 550 (705)
T KOG0639|consen 478 RTLIVGGEASTLSIWDLAA-------PTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 550 (705)
T ss_pred ceEEeccccceeeeeeccC-------CCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCC
Confidence 3588888877888887752 112333 32222344555555 45676666 689999999999999999999
Q ss_pred CCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 101 PRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 101 ~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
+| .+.|+..+ |..+| +++-|++||.||.++...+++-|++.-
T Consensus 551 tD---GascIdis~dGtklW-TGGlDntvRcWDlregrqlqqhdF~SQ 594 (705)
T KOG0639|consen 551 TD---GASCIDISKDGTKLW-TGGLDNTVRCWDLREGRQLQQHDFSSQ 594 (705)
T ss_pred CC---CceeEEecCCCceee-cCCCccceeehhhhhhhhhhhhhhhhh
Confidence 98 78888888 66778 999999999999999999999887653
No 26
>KOG0646|consensus
Probab=98.89 E-value=4.1e-08 Score=81.74 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=96.6
Q ss_pred CCceeeeeeCC-CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEE
Q psy16020 5 HPTPYPLNKIL-DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWC 77 (151)
Q Consensus 5 ~~~~l~~i~l~-~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~ 77 (151)
+++.++...=+ -+|++|.-..+ +||.+..|-++.+|+...+. -.+++.. ..+++||++- +..+|+
T Consensus 163 ~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~-------LLlti~f-p~si~av~lDpae~~~yi 234 (476)
T KOG0646|consen 163 SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV-------LLLTITF-PSSIKAVALDPAERVVYI 234 (476)
T ss_pred CccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccce-------eeEEEec-CCcceeEEEcccccEEEe
Confidence 34455555433 48888877544 89999999999999885321 1234433 2899999984 567999
Q ss_pred EeC-CeEEEEeCCCCc----------------EEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceee
Q psy16020 78 GYK-NKIHVVDPKSLV----------------VLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 78 g~~-n~I~vid~~t~~----------------i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
|.. ++|++++..... -.+.|.+|++ ++.|+|++++-+| +++|++.|+.+++||..+.+++.
T Consensus 235 Gt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~-~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iR 313 (476)
T KOG0646|consen 235 GTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHEN-ESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIR 313 (476)
T ss_pred cCCcceEEeeehhcCCcccccccccccccccceeeeeccccC-CcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHH
Confidence 995 799999876554 2234667865 4799999999665 49999999999999999999888
Q ss_pred eEe
Q psy16020 140 DVD 142 (151)
Q Consensus 140 ~id 142 (151)
.+-
T Consensus 314 tl~ 316 (476)
T KOG0646|consen 314 TLQ 316 (476)
T ss_pred HHh
Confidence 774
No 27
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.89 E-value=1.8e-07 Score=83.87 Aligned_cols=123 Identities=12% Similarity=0.158 Sum_probs=92.8
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCC---CCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEe-CCeEEE
Q psy16020 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGP---DGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGY-KNKIHV 85 (151)
Q Consensus 15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~---~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~-~n~I~v 85 (151)
...|.++.+.+ +.+.+|..||+|.+|+... ++. +...+ ...+.. ..+|.++... ++.|..|+ ++.|.+
T Consensus 483 ~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~-~~~~~-~~~~~~-~~~v~~l~~~~~~~~~las~~~Dg~v~l 559 (793)
T PLN00181 483 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGR-DIHYP-VVELAS-RSKLSGICWNSYIKSQVASSNFEGVVQV 559 (793)
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccccc-ccccc-eEEecc-cCceeeEEeccCCCCEEEEEeCCCeEEE
Confidence 35799998864 4688899999999998642 110 11111 223332 3788888875 35677666 579999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
||.++++....+.+|+. .|.++.+.+ ..+++|++.|+.|++||.++.+.+..+..
T Consensus 560 Wd~~~~~~~~~~~~H~~---~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~ 616 (793)
T PLN00181 560 WDVARSQLVTEMKEHEK---RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT 616 (793)
T ss_pred EECCCCeEEEEecCCCC---CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 99999999999999975 899999974 35689999999999999999888877753
No 28
>KOG0263|consensus
Probab=98.89 E-value=1.2e-08 Score=88.88 Aligned_cols=108 Identities=15% Similarity=0.160 Sum_probs=86.8
Q ss_pred CceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeCCEEEEEeC---CeEEEEeCC
Q psy16020 16 DTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYK---NKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~~~Lw~g~~---n~I~vid~~ 89 (151)
+-|.|..|++|. ++.|.+|-++.+|+...+ ..+.+. .++.||.++++...-.|.|+| +.|.+||..
T Consensus 536 sDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G--------~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~ 607 (707)
T KOG0263|consen 536 SDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG--------NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLA 607 (707)
T ss_pred cccceEEECCcccccccCCCCceEEEEEcCCC--------cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcC
Confidence 468889998874 666667778888876533 234432 367999999998766666664 689999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCc
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t 134 (151)
+++...++.+|++ .|..|.++.+ +|+++++.|+.|++||...
T Consensus 608 ~~~~v~~l~~Ht~---ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 608 NGSLVKQLKGHTG---TIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred CCcchhhhhcccC---ceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 9999999999975 9999999955 5599999999999999986
No 29
>KOG0647|consensus
Probab=98.87 E-value=4.5e-08 Score=78.13 Aligned_cols=123 Identities=19% Similarity=0.223 Sum_probs=94.5
Q ss_pred CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCC
Q psy16020 16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~ 89 (151)
|+|-+|.+.+ +.+-+|.=||+|.+|+....|.- .++...- ...||-|....+ ++++.|+ ++.+.+||+.
T Consensus 28 DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~---~~ka~~~--~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 28 DSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL---VPKAQQS--HDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred cchheeEeccccCceEEecccCCceEEEEEecCCcc---cchhhhc--cCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 7999999987 33557888999999999865542 2333222 248999999974 6788776 6789999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
|+|+ .++.+|.. +|.++.+.+. ..+++++-|-+||.||++...++..+++-..+
T Consensus 103 S~Q~-~~v~~Hd~---pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRv 159 (347)
T KOG0647|consen 103 SGQV-SQVAAHDA---PVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERV 159 (347)
T ss_pred CCCe-eeeeeccc---ceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeecccee
Confidence 9976 56777965 7777777643 35799999999999999999999988765443
No 30
>KOG1036|consensus
Probab=98.86 E-value=7.7e-08 Score=76.74 Aligned_cols=118 Identities=19% Similarity=0.214 Sum_probs=93.1
Q ss_pred eeeeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCC-eEE
Q psy16020 9 YPLNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKN-KIH 84 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n-~I~ 84 (151)
...++...|+++-.|.+ ..+|+|..||.|..|+++.+ ....+|.+..||+||... .+.+-.|+++ +|.
T Consensus 48 ~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~--------~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik 119 (323)
T KOG1036|consen 48 KLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTG--------NEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIK 119 (323)
T ss_pred hhheecCCceeeeeccCCceEEEeccCceEEEEEecCC--------cceeeccCCCceEEEEeeccCCeEEEcccCccEE
Confidence 34556678999999876 57999999999999998632 345778777999999998 6889999965 899
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
+||+..-...-+++ ....|.+|...|+. ++-+..+..+.+||.++.+.-.
T Consensus 120 ~wD~R~~~~~~~~d----~~kkVy~~~v~g~~-LvVg~~~r~v~iyDLRn~~~~~ 169 (323)
T KOG1036|consen 120 FWDPRNKVVVGTFD----QGKKVYCMDVSGNR-LVVGTSDRKVLIYDLRNLDEPF 169 (323)
T ss_pred EEeccccccccccc----cCceEEEEeccCCE-EEEeecCceEEEEEcccccchh
Confidence 99999855554454 33499999998887 5566778899999999865443
No 31
>KOG0306|consensus
Probab=98.84 E-value=3.9e-08 Score=86.01 Aligned_cols=116 Identities=21% Similarity=0.202 Sum_probs=97.6
Q ss_pred CceeeeEEeCCeE--EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCCC
Q psy16020 16 DTALPPVHVQGRV--VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~~v--~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t 90 (151)
..|+|+..+++.+ -||=+||.|-+|+..++ -..+.+..++..|++|.+- +.+|.-|+. ..|.|||.-.
T Consensus 66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~-------~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~ 138 (888)
T KOG0306|consen 66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESE-------EILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVG 138 (888)
T ss_pred ceEEEeeccCCcceEEEEecCceEEeeccCCC-------ceeeeecccccceEEEEEcccCceEeecCCCccEEEEEecc
Confidence 5899999988865 99999999999987532 2356776678999999995 678888885 5799999988
Q ss_pred CcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
-...-++.+|.+ +|+.+.+.+ +.+.+|++.|+.|++||.+|..+....
T Consensus 139 E~Gl~rL~GHkd---~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Th 187 (888)
T KOG0306|consen 139 EEGLFRLRGHKD---SITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETH 187 (888)
T ss_pred ceeeEEeecchH---HHhHHhccCCCeEEEEeccCceEEEEecccceeeeEE
Confidence 888899999987 888888886 888999999999999999987766543
No 32
>PTZ00421 coronin; Provisional
Probab=98.84 E-value=4.1e-07 Score=77.96 Aligned_cols=125 Identities=14% Similarity=0.174 Sum_probs=85.3
Q ss_pred eeeeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-
Q psy16020 8 PYPLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK- 80 (151)
Q Consensus 8 ~l~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~- 80 (151)
++..++-+ ..|.++.+++ +.++.|..||+|.+|+...+ .....+..+..+|+++.+. ++.|..|+.
T Consensus 117 ~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg-------~~~~~l~~h~~~V~sla~spdG~lLatgs~D 189 (493)
T PTZ00421 117 PIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG-------KAVEVIKCHSDQITSLEWNLDGSLLCTTSKD 189 (493)
T ss_pred ceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC-------eEEEEEcCCCCceEEEEEECCCCEEEEecCC
Confidence 34444433 6899999975 36888899999999987531 1122344445899999997 356777775
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEE----cCCCeEEEEeCCccc-eeeeE
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSI----RLDSTLRMYNAHTYQ-HLQDV 141 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~----~~d~~l~lwd~~t~~-~l~~i 141 (151)
++|++||+++++...++.+|... .+....+. ..+..++. +.|+.|++||.++.+ ++..+
T Consensus 190 g~IrIwD~rsg~~v~tl~~H~~~--~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~ 254 (493)
T PTZ00421 190 KKLNIIDPRDGTIVSSVEAHASA--KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTV 254 (493)
T ss_pred CEEEEEECCCCcEEEEEecCCCC--cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEe
Confidence 58999999999999999999642 22233333 23344444 357899999998754 44433
No 33
>KOG0281|consensus
Probab=98.83 E-value=1.5e-08 Score=82.45 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=95.8
Q ss_pred eeeeeeCC----CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-Ce
Q psy16020 8 PYPLNKIL----DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NK 82 (151)
Q Consensus 8 ~l~~i~l~----~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~ 82 (151)
.+..|.-| +.|+|+.|.++.+..|+-|.+|.||+++. + ...-.|..+..+|-|+.+-+.-+--|+. .+
T Consensus 186 ~~~rinc~Se~skgVYClQYDD~kiVSGlrDnTikiWD~n~-----~--~c~~~L~GHtGSVLCLqyd~rviisGSSDsT 258 (499)
T KOG0281|consen 186 LLQRINCRSENSKGVYCLQYDDEKIVSGLRDNTIKIWDKNS-----L--ECLKILTGHTGSVLCLQYDERVIVSGSSDST 258 (499)
T ss_pred eeeeecCCcccCCceEEEEecchhhhcccccCceEEecccc-----H--HHHHhhhcCCCcEEeeeccceEEEecCCCce
Confidence 35556555 59999999999999999999999999862 1 1222444556999999998876777774 58
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcc
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~ 135 (151)
|.|||.+|++..+++-.|.+ .|-++.++ +|.-+++++|.++.+||..+-
T Consensus 259 vrvWDv~tge~l~tlihHce---aVLhlrf~-ng~mvtcSkDrsiaVWdm~sp 307 (499)
T KOG0281|consen 259 VRVWDVNTGEPLNTLIHHCE---AVLHLRFS-NGYMVTCSKDRSIAVWDMASP 307 (499)
T ss_pred EEEEeccCCchhhHHhhhcc---eeEEEEEe-CCEEEEecCCceeEEEeccCc
Confidence 99999999999999999987 89999886 666889999999999998753
No 34
>KOG0310|consensus
Probab=98.82 E-value=1.2e-07 Score=79.29 Aligned_cols=124 Identities=20% Similarity=0.180 Sum_probs=95.3
Q ss_pred CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-EEEEEe-CCeEEEEeCCC
Q psy16020 16 DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-KVWCGY-KNKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-~Lw~g~-~n~I~vid~~t 90 (151)
|.|-|+...+. -|+.|.=||.|..|+....+ ....++. +..||-.+++..+ .+.+.+ ||.|.|||..+
T Consensus 154 DYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~------~~v~eln-hg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~ 226 (487)
T KOG0310|consen 154 DYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT------SRVVELN-HGCPVESVLALPSGSLIASAGGNSVKVWDLTT 226 (487)
T ss_pred ceeEeeccccCCCeEEEecCCCceEEEEEeccCC------ceeEEec-CCCceeeEEEcCCCCEEEEcCCCeEEEEEecC
Confidence 67878777654 58889999999999876432 3455664 3599999999864 555555 68999999985
Q ss_pred -CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020 91 -LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK 149 (151)
Q Consensus 91 -~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~~ 149 (151)
++....+.-|. ..|+||.+.+++- ++|++-|+.+++||+.+++.........++-.
T Consensus 227 G~qll~~~~~H~---KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLs 284 (487)
T KOG0310|consen 227 GGQLLTSMFNHN---KTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLS 284 (487)
T ss_pred Cceehhhhhccc---ceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccceee
Confidence 55555555475 4899999997655 89999999999999999998888777766543
No 35
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.82 E-value=3.4e-07 Score=82.12 Aligned_cols=120 Identities=14% Similarity=0.124 Sum_probs=90.2
Q ss_pred CCCceeeeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEE
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVW 76 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw 76 (151)
.+.+.+..++-+ +.|.++.+++ +.+++|..||+|.+|+.... .....+. . ..+|.|+.+. +..|.
T Consensus 563 ~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~-----~~~~~~~--~-~~~v~~v~~~~~~g~~la 634 (793)
T PLN00181 563 ARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG-----VSIGTIK--T-KANICCVQFPSESGRSLA 634 (793)
T ss_pred CCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC-----cEEEEEe--c-CCCeEEEEEeCCCCCEEE
Confidence 345566666544 7899999963 46888999999999997532 1222232 2 2678888874 35688
Q ss_pred EEeC-CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020 77 CGYK-NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 77 ~g~~-n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t 134 (151)
+|+. +.|++||.++.+ ...++.+|.. .|.++.+.....+++++.|++|++||.++
T Consensus 635 tgs~dg~I~iwD~~~~~~~~~~~~~h~~---~V~~v~f~~~~~lvs~s~D~~ikiWd~~~ 691 (793)
T PLN00181 635 FGSADHKVYYYDLRNPKLPLCTMIGHSK---TVSYVRFVDSSTLVSSSTDNTLKLWDLSM 691 (793)
T ss_pred EEeCCCeEEEEECCCCCccceEecCCCC---CEEEEEEeCCCEEEEEECCCEEEEEeCCC
Confidence 8875 689999998876 4677888875 89999988777789999999999999974
No 36
>KOG0278|consensus
Probab=98.82 E-value=9.5e-08 Score=74.92 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=87.1
Q ss_pred CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC--
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK-- 80 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~-- 80 (151)
.+.+.++++.++.+|.++.++..-=|+-.++|.=..| ||......++-..-+..|.+-.+.. ..++++-|
T Consensus 173 rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~F-------wdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged 245 (334)
T KOG0278|consen 173 RTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKF-------WDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGED 245 (334)
T ss_pred ccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEE-------eccccccceeeccCccccccccccCCCceEEecCcc
Confidence 4667889999999999998876544555556653333 3333444444433225566656654 34555444
Q ss_pred CeEEEEeCCCCcEEEEE-EecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccce
Q psy16020 81 NKIHVVDPKSLVVLKSF-DAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~-~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~ 137 (151)
..+|.||-.|+.-.-.+ .+|. .+|+|+.++++|- +.|+++|++||||.+.-.+.
T Consensus 246 ~~~~kfDy~TgeEi~~~nkgh~---gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 246 FKVYKFDYNTGEEIGSYNKGHF---GPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred eEEEEEeccCCceeeecccCCC---CceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence 37999999999876665 6775 4999999998876 89999999999999875443
No 37
>KOG0272|consensus
Probab=98.80 E-value=7.8e-08 Score=79.45 Aligned_cols=123 Identities=16% Similarity=0.187 Sum_probs=100.6
Q ss_pred CceeeeEEeCC----eEEEEecCCcEEEEEcCC---------------------CC-------------CCCCCcceEE-
Q psy16020 16 DTALPPVHVQG----RVVCALADGSVAIFRRGP---------------------DG-------------QWDLSKYHTV- 56 (151)
Q Consensus 16 ~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~---------------------~~-------------~wd~~~~~~i- 56 (151)
+.|.++.+++. .+-.|.+||++.+|.... +| -||++....+
T Consensus 218 ~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL 297 (459)
T KOG0272|consen 218 SRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELL 297 (459)
T ss_pred cceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhH
Confidence 68888888765 688999999999998763 11 3677655433
Q ss_pred EeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeC
Q psy16020 57 TLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNA 132 (151)
Q Consensus 57 ~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~ 132 (151)
....+..+|.++++. ++.|.+.+| +.=.|||+.||..+-.|++|.. +|..|.++++|- .++++.|+++++||.
T Consensus 298 ~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k---~I~~V~fsPNGy~lATgs~Dnt~kVWDL 374 (459)
T KOG0272|consen 298 LQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK---EILSVAFSPNGYHLATGSSDNTCKVWDL 374 (459)
T ss_pred hhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEeccccc---ceeeEeECCCceEEeecCCCCcEEEeee
Confidence 223345999999997 577888776 4678999999999999999986 999999999988 899999999999999
Q ss_pred CccceeeeE
Q psy16020 133 HTYQHLQDV 141 (151)
Q Consensus 133 ~t~~~l~~i 141 (151)
+.-+.+..|
T Consensus 375 R~r~~ly~i 383 (459)
T KOG0272|consen 375 RMRSELYTI 383 (459)
T ss_pred cccccceec
Confidence 988887777
No 38
>KOG0265|consensus
Probab=98.78 E-value=1.1e-07 Score=75.91 Aligned_cols=117 Identities=11% Similarity=0.129 Sum_probs=85.6
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCCC
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~t 90 (151)
..|+.+.++++ .+..|..|-.|..|+.. | |.++...++. +...|.-+... ++.|..+. +.+|++||++|
T Consensus 48 geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~--g--dceN~~~lkg--HsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t 121 (338)
T KOG0265|consen 48 GEIYTIKFHPDGSCFASGGSDRAIVLWNVY--G--DCENFWVLKG--HSGAVMELHGMRDGSHILSCGTDKTVRGWDAET 121 (338)
T ss_pred ceEEEEEECCCCCeEeecCCcceEEEEecc--c--cccceeeecc--ccceeEeeeeccCCCEEEEecCCceEEEEeccc
Confidence 57888888764 35556666678777643 2 3344444453 34788877776 35565444 56899999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
++..+.+.+|++ -|+.|... |.....|++.|+++||||.++.+.++.+
T Consensus 122 G~~~rk~k~h~~---~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~ 171 (338)
T KOG0265|consen 122 GKRIRKHKGHTS---FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF 171 (338)
T ss_pred ceeeehhccccc---eeeecCccccCCeEEEecCCCceEEEEeecccchhhcc
Confidence 999999999986 67777655 4455899999999999999977777766
No 39
>KOG1036|consensus
Probab=98.78 E-value=1.7e-07 Score=74.78 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=92.3
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-CCeEEEEeCCCC
Q psy16020 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-KNKIHVVDPKSL 91 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~n~I~vid~~t~ 91 (151)
|.|.++.|. .+.+.|++=||+|.+|+.... +. ..++ .++.|+.+.++.+ .++|.|+ +++|..+|..++
T Consensus 14 d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~-----~l--~~~~-~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~ 85 (323)
T KOG1036|consen 14 DGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN-----SL--KLKF-KHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTG 85 (323)
T ss_pred hceeeEEEcCcCCcEEEEeccCcEEEEeccch-----hh--hhhe-ecCCceeeeeccCCceEEEeccCceEEEEEecCC
Confidence 789999987 457999999999999997632 11 1122 2359999999986 6799998 789999999988
Q ss_pred cEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
+..+ +..|.. .|.||... +.+..||++-|.+|++||++.......+|....
T Consensus 86 ~~~~-igth~~---~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kk 137 (323)
T KOG1036|consen 86 NEDQ-IGTHDE---GIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKK 137 (323)
T ss_pred ccee-eccCCC---ceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCce
Confidence 7643 444754 89999998 567799999999999999997666666654443
No 40
>PTZ00420 coronin; Provisional
Probab=98.78 E-value=9e-07 Score=77.01 Aligned_cols=120 Identities=14% Similarity=0.178 Sum_probs=80.5
Q ss_pred CceeeeEEeCC--eE-EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCC
Q psy16020 16 DTALPPVHVQG--RV-VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~~--~v-~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~ 89 (151)
..|.++.+++. .+ ..|..||+|.+|+...+ . ....+.. ..+|.++.+. ++.|.++| +++|++||++
T Consensus 126 ~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg-----~--~~~~i~~-~~~V~SlswspdG~lLat~s~D~~IrIwD~R 197 (568)
T PTZ00420 126 KKISIIDWNPMNYYIMCSSGFDSFVNIWDIENE-----K--RAFQINM-PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR 197 (568)
T ss_pred CcEEEEEECCCCCeEEEEEeCCCeEEEEECCCC-----c--EEEEEec-CCcEEEEEECCCCCEEEEEecCCEEEEEECC
Confidence 68999999863 34 45678999999987532 1 1223322 3789999986 35566677 4689999999
Q ss_pred CCcEEEEEEecCCCCCc--eeEEEEeCC-EEEEEEcCC----CeEEEEeCCc-cceeeeEeC
Q psy16020 90 SLVVLKSFDAHPRRESQ--VRQMTWAGD-GVWVSIRLD----STLRMYNAHT-YQHLQDVDI 143 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~--I~~m~~~~~-~vwis~~~d----~~l~lwd~~t-~~~l~~idi 143 (151)
++++..++.+|...... +....++++ +.++|++.| ..|+|||.++ .+++..+.+
T Consensus 198 sg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~l 259 (568)
T PTZ00420 198 KQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSI 259 (568)
T ss_pred CCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEe
Confidence 99999999999752111 111112233 456776655 4799999995 667766544
No 41
>KOG0301|consensus
Probab=98.77 E-value=5.3e-08 Score=84.40 Aligned_cols=114 Identities=23% Similarity=0.346 Sum_probs=89.1
Q ss_pred eEEeC---CeEEEEecCCcEEEEEcCC--------------------------CCCCCCCcceEEE-------eCCCCCc
Q psy16020 21 PVHVQ---GRVVCALADGSVAIFRRGP--------------------------DGQWDLSKYHTVT-------LGLPHHS 64 (151)
Q Consensus 21 i~~~~---~~v~vgl~nG~l~v~~~~~--------------------------~~~wd~~~~~~i~-------l~~~~~p 64 (151)
++|.+ +++++|+-|+.+++|.+.. .|+||.. .+... +-.++.+
T Consensus 64 i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~T-akvW~~~~l~~~l~gH~as 142 (745)
T KOG0301|consen 64 ICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDST-AKVWRIGELVYSLQGHTAS 142 (745)
T ss_pred ceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccc-eEEecchhhhcccCCcchh
Confidence 56654 6799999999999998862 3578743 22222 2335689
Q ss_pred eEEEeeeC-CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 65 VRSLAAVY-NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 65 V~~m~~v~-~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|-+++..+ +++-.||++ .|++|+. ++.+++|.+|+| .|+.++..+++=++|+++|+.||+|+. +++.+.+.
T Consensus 143 VWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD---~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~ 215 (745)
T KOG0301|consen 143 VWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTD---CVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEM 215 (745)
T ss_pred eeeeeecCCCcEEeccCcceeeeccC--Cchhhhhccchh---heeeeEEecCCCeEeecCCceEEEEec-cCceeeee
Confidence 98888764 667788876 6999965 889999999998 999999998866999999999999999 57776654
No 42
>KOG0273|consensus
Probab=98.76 E-value=2.2e-07 Score=77.73 Aligned_cols=124 Identities=16% Similarity=0.203 Sum_probs=93.2
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCC-CCC--cceEEEeCC-CCCceEEEeeeCC-EEEEEeCCeEEEEe
Q psy16020 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQW-DLS--KYHTVTLGL-PHHSVRSLAAVYN-KVWCGYKNKIHVVD 87 (151)
Q Consensus 15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~w-d~~--~~~~i~l~~-~~~pV~~m~~v~~-~Lw~g~~n~I~vid 87 (151)
..+|.+|+|. ..-+..+..||+|.+|++..++.- ++. ......+.- |..|++.-...+. .+|++.++.|.+||
T Consensus 359 ~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwd 438 (524)
T KOG0273|consen 359 HGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWD 438 (524)
T ss_pred cCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEE
Confidence 3689999998 445667777899999998754421 221 112223321 2355544333343 48888899999999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
++.++...+|..|+. +|..++++++|- ..|++.|+.|.+|+++++++.++.
T Consensus 439 v~~gv~i~~f~kH~~---pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~ 490 (524)
T KOG0273|consen 439 VESGVPIHTLMKHQE---PVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSY 490 (524)
T ss_pred ccCCceeEeeccCCC---ceEEEEecCCCcEEEecCCCCeeEeccccchheeEee
Confidence 999999999999986 999999998877 789999999999999999988875
No 43
>KOG0318|consensus
Probab=98.74 E-value=3e-07 Score=77.92 Aligned_cols=114 Identities=17% Similarity=0.274 Sum_probs=92.8
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEE--eCCCCCceEEEeeeC-CEEEE--EeCCeEEEEeCCCCcEEEEEE-
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT--LGLPHHSVRSLAAVY-NKVWC--GYKNKIHVVDPKSLVVLKSFD- 98 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~--l~~~~~pV~~m~~v~-~~Lw~--g~~n~I~vid~~t~~i~~~~~- 98 (151)
+-|+..|..|+++++|+= +|..++ .+.+..=|+|+-+.. +..++ |++++|+++|-+|++....|+
T Consensus 160 PfRi~T~sdDn~v~ffeG---------PPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~ 230 (603)
T KOG0318|consen 160 PFRIATGSDDNTVAFFEG---------PPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED 230 (603)
T ss_pred ceEEEeccCCCeEEEeeC---------CCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC
Confidence 336888888999999972 444444 445557899999974 55554 446899999999999999999
Q ss_pred --ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCcccccc
Q psy16020 99 --AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKM 150 (151)
Q Consensus 99 --~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~~~ 150 (151)
+|. ..|..+.+++++- +++.+-|-++|+||+.+.++.+++.+...+.+|
T Consensus 231 ~~aHk---GsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dq 282 (603)
T KOG0318|consen 231 SDAHK---GSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQ 282 (603)
T ss_pred CCCcc---ccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhce
Confidence 776 4899999997766 899999999999999999999999888776655
No 44
>KOG2110|consensus
Probab=98.73 E-value=7.2e-07 Score=72.76 Aligned_cols=124 Identities=17% Similarity=0.278 Sum_probs=92.8
Q ss_pred eeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCC-CceEEEeeeCCEEEEEe---C--Ce
Q psy16020 9 YPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH-HSVRSLAAVYNKVWCGY---K--NK 82 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~-~pV~~m~~v~~~Lw~g~---~--n~ 82 (151)
+=.+..|.+|++.....+|+.|-| .++|.||+.+ |....+.|..-.++ .-+-.+.+..+.=|.++ . +.
T Consensus 81 ICe~~fpt~IL~VrmNr~RLvV~L-ee~IyIydI~-----~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~Gd 154 (391)
T KOG2110|consen 81 ICEIFFPTSILAVRMNRKRLVVCL-EESIYIYDIK-----DMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGD 154 (391)
T ss_pred EEEEecCCceEEEEEccceEEEEE-cccEEEEecc-----cceeehhhhccCCCccceEeeccCCCCceEEecCCCCCce
Confidence 345667889999999999999999 5569999886 34444444443221 33445555544334444 2 58
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcC-CCeEEEEeCCccceeeeE
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRL-DSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~-d~~l~lwd~~t~~~l~~i 141 (151)
|++||+.+++....+++|.. .+.+|+++.+|- ..+.++ ...||+|++.+++.+.++
T Consensus 155 V~l~d~~nl~~v~~I~aH~~---~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eF 212 (391)
T KOG2110|consen 155 VVLFDTINLQPVNTINAHKG---PLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEF 212 (391)
T ss_pred EEEEEcccceeeeEEEecCC---ceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeee
Confidence 99999999999999999974 999999998887 555555 456999999999999987
No 45
>KOG0315|consensus
Probab=98.72 E-value=5.3e-07 Score=70.62 Aligned_cols=121 Identities=12% Similarity=0.125 Sum_probs=91.5
Q ss_pred CceeeeeeCCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-C
Q psy16020 6 PTPYPLNKILDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-K 80 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~ 80 (151)
+.|=+..+.+++|.+++-++|+ +++|-.+|.|.||+..++-. ... .+.+...||+++.+.. ..|-++. .
T Consensus 115 ~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c----~~~--liPe~~~~i~sl~v~~dgsml~a~nnk 188 (311)
T KOG0315|consen 115 LSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSC----THE--LIPEDDTSIQSLTVMPDGSMLAAANNK 188 (311)
T ss_pred cccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcc----ccc--cCCCCCcceeeEEEcCCCcEEEEecCC
Confidence 5566667788999999998875 99999999999999874321 112 2233348999999973 4465555 4
Q ss_pred CeEEEEeCCCCc------EEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcc
Q psy16020 81 NKIHVVDPKSLV------VLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 81 n~I~vid~~t~~------i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~ 135 (151)
++-|||+.-+.+ .+..|.+|+. .|..-.+++++- +++++.|-++++|.++++
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~---~il~C~lSPd~k~lat~ssdktv~iwn~~~~ 247 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNG---HILRCLLSPDVKYLATCSSDKTVKIWNTDDF 247 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccc---eEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence 789999987644 4556788874 777777777766 889999999999999987
No 46
>KOG0276|consensus
Probab=98.72 E-value=1.7e-07 Score=80.82 Aligned_cols=132 Identities=15% Similarity=0.138 Sum_probs=106.5
Q ss_pred CCCCCceeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEE
Q psy16020 2 EYPHPTPYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKV 75 (151)
Q Consensus 2 ~~~~~~~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~L 75 (151)
||-+.+.+++..- +|-|-||.-++. ++..+..|=+|..|+|. +.|.... ..-.+.+=|.++++.. ++.
T Consensus 83 nynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we--~~wa~~q----tfeGH~HyVMqv~fnPkD~ntF 156 (794)
T KOG0276|consen 83 NYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWE--NEWACEQ----TFEGHEHYVMQVAFNPKDPNTF 156 (794)
T ss_pred ecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeecc--Cceeeee----EEcCcceEEEEEEecCCCccce
Confidence 6778888899874 489999998876 57788878899999986 5564321 3334457888888873 445
Q ss_pred EEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE---EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 76 WCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG---VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 76 w~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~---vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.-+| +.+|+||+..+-....++++|+. .|+|+.+.+.| -+||+++|.++++||-+|.+++|+++
T Consensus 157 aS~sLDrTVKVWslgs~~~nfTl~gHek---GVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLe 224 (794)
T KOG0276|consen 157 ASASLDRTVKVWSLGSPHPNFTLEGHEK---GVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLE 224 (794)
T ss_pred eeeeccccEEEEEcCCCCCceeeecccc---CcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhh
Confidence 5455 67899999999999999999975 89999999776 69999999999999999999988873
No 47
>KOG0286|consensus
Probab=98.71 E-value=6.8e-07 Score=71.24 Aligned_cols=116 Identities=21% Similarity=0.202 Sum_probs=93.2
Q ss_pred CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCC
Q psy16020 16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t 90 (151)
..|+++.... +++..|..||.|.||+- |.....+.|++.. .=|...++.. +.+.||- +|+-.|++..+
T Consensus 56 ~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs-----~TtnK~haipl~s--~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~ 128 (343)
T KOG0286|consen 56 NKIYAMDWSTDSRRIVSASQDGKLIVWDS-----FTTNKVHAIPLPS--SWVMTCAYSPSGNFVACGGLDNKCSIYPLST 128 (343)
T ss_pred cceeeeEecCCcCeEEeeccCCeEEEEEc-----ccccceeEEecCc--eeEEEEEECCCCCeEEecCcCceeEEEeccc
Confidence 5788887754 47999999999999985 3445567788876 7777777765 4455554 47777777775
Q ss_pred C------cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 91 L------VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 91 ~------~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
- ++.+.+.+|+. ++.|-.+..++-.++.+.|.+.-+||.++++.++.+
T Consensus 129 ~d~~g~~~v~r~l~gHtg---ylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f 182 (343)
T KOG0286|consen 129 RDAEGNVRVSRELAGHTG---YLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVF 182 (343)
T ss_pred ccccccceeeeeecCccc---eeEEEEEcCCCceEecCCCceEEEEEcccceEEEEe
Confidence 5 57888999985 999999999999999999999999999999999876
No 48
>KOG0296|consensus
Probab=98.71 E-value=1.5e-07 Score=76.61 Aligned_cols=95 Identities=14% Similarity=0.223 Sum_probs=75.7
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCC
Q psy16020 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRES 105 (151)
Q Consensus 28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~ 105 (151)
.-+|+.||+|++|+..+ |. ++.+.. ++.+|..+...+ ..|+++|. ++|+.||++||+.+.+..+|..
T Consensus 301 ~A~G~vdG~i~iyD~a~---~~---~R~~c~--he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~--- 369 (399)
T KOG0296|consen 301 AACGSVDGTIAIYDLAA---ST---LRHICE--HEDGVTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTGHQM--- 369 (399)
T ss_pred hhcccccceEEEEeccc---ch---hheecc--CCCceEEEEEcCcchheeeccCceEEeeeccccceEEEEecCch---
Confidence 44678899999999852 22 222222 236777777766 66999996 5999999999999999999986
Q ss_pred ceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020 106 QVRQMTWAGDGV-WVSIRLDSTLRMYNAH 133 (151)
Q Consensus 106 ~I~~m~~~~~~v-wis~~~d~~l~lwd~~ 133 (151)
.|.++++++++- .++.+.|++.++|+..
T Consensus 370 ~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 370 GILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred heeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 899999997754 8899999999999864
No 49
>KOG0279|consensus
Probab=98.71 E-value=5.8e-07 Score=71.16 Aligned_cols=133 Identities=13% Similarity=0.095 Sum_probs=99.9
Q ss_pred ceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-C-CCceEEEeeeCC--E-EEEE
Q psy16020 7 TPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-P-HHSVRSLAAVYN--K-VWCG 78 (151)
Q Consensus 7 ~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~-~~pV~~m~~v~~--~-Lw~g 78 (151)
++-+++--+ .-|++..+..+ ++..|.-|-+|..|... .....++++ . ..=|.|+-++.+ + +-+.
T Consensus 96 ~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~--------g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs 167 (315)
T KOG0279|consen 96 ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL--------GVCKYTIHEDSHREWVSCVRFSPNESNPIIVS 167 (315)
T ss_pred cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec--------ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEE
Confidence 444444444 56777777543 68888888888887653 223445543 1 367999999864 3 3333
Q ss_pred e-C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCcccccc
Q psy16020 79 Y-K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKM 150 (151)
Q Consensus 79 ~-~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~~~ 150 (151)
+ + ..|+|||.++.++..+|.+|+- .++.|+++++|- .+|+++|+...|||....++++.++-...|+.+
T Consensus 168 ~s~DktvKvWnl~~~~l~~~~~gh~~---~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl 239 (315)
T KOG0279|consen 168 ASWDKTVKVWNLRNCQLRTTFIGHSG---YVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSL 239 (315)
T ss_pred ccCCceEEEEccCCcchhhccccccc---cEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeE
Confidence 3 3 4799999999999999999974 999999998887 789999999999999999999998866666543
No 50
>KOG1446|consensus
Probab=98.70 E-value=9.8e-07 Score=70.55 Aligned_cols=121 Identities=14% Similarity=0.178 Sum_probs=92.7
Q ss_pred CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe---CCeEEEEe
Q psy16020 15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY---KNKIHVVD 87 (151)
Q Consensus 15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~---~n~I~vid 87 (151)
...|.+|.|.++ .+.++..|-+|.+|+-..+. ..+ .+..+++-|.+.-+. .+.+-.++ ++.|+-++
T Consensus 14 ~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~-----~~~--ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLs 86 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK-----QVK--TINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLS 86 (311)
T ss_pred CCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc-----eee--EeecccccccEEEEecCCceEEEccCCCCCceEEEE
Confidence 468999999654 67777888899999875321 222 333334556555554 46666666 35899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
..+-+.+|-|.+|.+ .|+.+..+ .+..++|.+.|.+|||||.++.++..-++..+
T Consensus 87 l~dNkylRYF~GH~~---~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~ 142 (311)
T KOG1446|consen 87 LHDNKYLRYFPGHKK---RVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG 142 (311)
T ss_pred eecCceEEEcCCCCc---eEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC
Confidence 999999999999986 99999998 44669999999999999999888887776654
No 51
>KOG0286|consensus
Probab=98.69 E-value=1.3e-06 Score=69.61 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=103.6
Q ss_pred CCceeeeeeCCC-ceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC
Q psy16020 5 HPTPYPLNKILD-TALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK 80 (151)
Q Consensus 5 ~~~~l~~i~l~~-~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~ 80 (151)
++...+.|+||+ =|..-.|.+ +.|-+|.-|..-.||+...... +-..+..-.|..+..=+.|..+.+ ++|-.|+|
T Consensus 86 TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~-~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SG 164 (343)
T KOG0286|consen 86 TTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDA-EGNVRVSRELAGHTGYLSCCRFLDDNHILTGSG 164 (343)
T ss_pred cccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccc-cccceeeeeecCccceeEEEEEcCCCceEecCC
Confidence 456688999994 677777754 5677888899999998862100 101222334655567788988885 67999998
Q ss_pred C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 81 N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 81 n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+ +.-.||.++++..+.|.+|+- -|-++..++ ++ -++|++-|..-+|||.+...+.|.+
T Consensus 165 D~TCalWDie~g~~~~~f~GH~g---DV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF 225 (343)
T KOG0286|consen 165 DMTCALWDIETGQQTQVFHGHTG---DVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTF 225 (343)
T ss_pred CceEEEEEcccceEEEEecCCcc---cEEEEecCCCCCCeEEecccccceeeeeccCcceeEee
Confidence 7 799999999999999999974 688888887 43 3999999999999999999999987
No 52
>KOG0279|consensus
Probab=98.68 E-value=4.8e-07 Score=71.62 Aligned_cols=119 Identities=11% Similarity=0.168 Sum_probs=93.1
Q ss_pred CCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEe
Q psy16020 15 LDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVD 87 (151)
Q Consensus 15 ~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid 87 (151)
.+=|.|+.++++ .+.-+..|++|.+|+.. +++. ..--+| ++.-++.|++. ++.|.+.-| +.++.||
T Consensus 148 ~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~-----~~~l-~~~~~g-h~~~v~t~~vSpDGslcasGgkdg~~~Lwd 220 (315)
T KOG0279|consen 148 REWVSCVRFSPNESNPIIVSASWDKTVKVWNLR-----NCQL-RTTFIG-HSGYVNTVTVSPDGSLCASGGKDGEAMLWD 220 (315)
T ss_pred cCcEEEEEEcCCCCCcEEEEccCCceEEEEccC-----Ccch-hhcccc-ccccEEEEEECCCCCEEecCCCCceEEEEE
Confidence 456999999988 36667788999998764 1111 122233 45889999996 456655443 6899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
...++...++++. ..|+.++++++.-|+....+..|++||.++...+.++.++
T Consensus 221 L~~~k~lysl~a~----~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d 273 (315)
T KOG0279|consen 221 LNEGKNLYSLEAF----DIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLD 273 (315)
T ss_pred ccCCceeEeccCC----CeEeeEEecCCceeEeeccCCceEEEeccchhhhhhcccc
Confidence 9999999999955 3899999999999999999999999999999998887543
No 53
>KOG0271|consensus
Probab=98.68 E-value=3.5e-07 Score=75.17 Aligned_cols=128 Identities=16% Similarity=0.169 Sum_probs=97.8
Q ss_pred CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG 78 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g 78 (151)
+-++|-.+|.=+ .+|+|..|.+ .++..|.+|-++.+|+.. .+.|.. .+-.++.=|-|++... +.|.-|
T Consensus 103 pvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~------TeTp~~-t~KgH~~WVlcvawsPDgk~iASG 175 (480)
T KOG0271|consen 103 PVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLD------TETPLF-TCKGHKNWVLCVAWSPDGKKIASG 175 (480)
T ss_pred ccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccC------CCCcce-eecCCccEEEEEEECCCcchhhcc
Confidence 445666666544 6999999976 478888888899998763 345433 3434468899999974 457777
Q ss_pred eC-CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEe------CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 79 YK-NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWA------GDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 79 ~~-n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~------~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|. |.|.+||+++++ +-+.|.+|+. -|+++++- +...+.|.+.|+.+++||+...+++..+
T Consensus 176 ~~dg~I~lwdpktg~~~g~~l~gH~K---~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l 243 (480)
T KOG0271|consen 176 SKDGSIRLWDPKTGQQIGRALRGHKK---WITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL 243 (480)
T ss_pred ccCCeEEEecCCCCCcccccccCccc---ceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe
Confidence 74 689999999988 5677999974 89999886 3356899999999999999988877665
No 54
>KOG0643|consensus
Probab=98.68 E-value=1e-06 Score=69.60 Aligned_cols=143 Identities=15% Similarity=0.184 Sum_probs=106.8
Q ss_pred CCCCceeeeeeCCCceeeeEEe-CCeEEEEecC------CcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeee--C
Q psy16020 3 YPHPTPYPLNKILDTALPPVHV-QGRVVCALAD------GSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAV--Y 72 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~-~~~v~vgl~n------G~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v--~ 72 (151)
+++.+++..++.+.+|-..-+. .+.+++...| +.|.+|+...+. .-+-++| .+++-.+.+.++.+..- +
T Consensus 81 v~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep-~~kI~t~~skit~a~Wg~l~ 159 (327)
T KOG0643|consen 81 VETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEP-YLKIPTPDSKITSALWGPLG 159 (327)
T ss_pred cCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCc-eEEecCCccceeeeeecccC
Confidence 5788999999999999988775 3345555445 568999876433 2222333 23343334666666653 4
Q ss_pred CEEEEEe-CCeEEEEeCCCC-cEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020 73 NKVWCGY-KNKIHVVDPKSL-VVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK 149 (151)
Q Consensus 73 ~~Lw~g~-~n~I~vid~~t~-~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~~ 149 (151)
+.|.+|- .++|..||++++ +..++-+.|+. .|+.|..+.+.- +++.+.|.+-+|||.+|++++++.-.+.+|+.
T Consensus 160 ~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~---~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~ 236 (327)
T KOG0643|consen 160 ETIIAGHEDGSISIYDARTGKELVDSDEEHSS---KINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNT 236 (327)
T ss_pred CEEEEecCCCcEEEEEcccCceeeechhhhcc---ccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccc
Confidence 5666555 469999999996 57777888974 999999998866 99999999999999999999999998888874
No 55
>KOG0313|consensus
Probab=98.67 E-value=6.3e-07 Score=73.39 Aligned_cols=116 Identities=18% Similarity=0.257 Sum_probs=90.5
Q ss_pred CceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCCCC
Q psy16020 16 DTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSL 91 (151)
Q Consensus 16 ~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~t~ 91 (151)
++|.++.+.+. .+|.+.-|-+|.+|+...++. .-.+.. +.++.|+.+.. +.|.|||.. .|.+||++++
T Consensus 261 ~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~-------~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~ 332 (423)
T KOG0313|consen 261 EPVSSVVWSDATVIYSVSWDHTIKVWDLETGGL-------KSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTG 332 (423)
T ss_pred cceeeEEEcCCCceEeecccceEEEEEeecccc-------eeeeec-CcceeEeecccccceeeecCCCCceeecCCCCC
Confidence 68888887654 588888888898887754332 112322 39999999975 558888865 6999999986
Q ss_pred c---EEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccc-eeeeEe
Q psy16020 92 V---VLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQ-HLQDVD 142 (151)
Q Consensus 92 ~---i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~-~l~~id 142 (151)
. +.++|.+|++ -|..+..++. ..++|++.|++++|||+++.+ ++.+|.
T Consensus 333 ~gs~v~~s~~gH~n---wVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~ 386 (423)
T KOG0313|consen 333 DGSVVSQSLIGHKN---WVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA 386 (423)
T ss_pred CCceeEEeeecchh---hhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec
Confidence 6 7888999986 7888888744 569999999999999999977 888885
No 56
>KOG0294|consensus
Probab=98.67 E-value=4.8e-07 Score=72.71 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=67.4
Q ss_pred eEEEeee-CCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCcc----
Q psy16020 65 VRSLAAV-YNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTY---- 135 (151)
Q Consensus 65 V~~m~~v-~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~---- 135 (151)
+-|+.+. ++.|.+|-+| .|.++|.++..+...|.+|++ .|..|....+ .+++|.+.|+.|++||.+.-
T Consensus 211 ~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~---RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~ 287 (362)
T KOG0294|consen 211 ILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHEN---RVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKKR 287 (362)
T ss_pred ceeeeecCCceEEEecCCceEEEeccCCCccceeeecchh---heeeeEEEecCCceEEEEeccCceEEEEEccccccCC
Confidence 5666665 4789999887 799999999999999999987 8888886533 67999999999999999987
Q ss_pred -ceeeeEeCCccc
Q psy16020 136 -QHLQDVDIEPYV 147 (151)
Q Consensus 136 -~~l~~idi~~~v 147 (151)
+++.++|+...+
T Consensus 288 ~~~l~e~n~~~Rl 300 (362)
T KOG0294|consen 288 PTLLAELNTNVRL 300 (362)
T ss_pred cceeEEeecCCcc
Confidence 799999885543
No 57
>KOG0284|consensus
Probab=98.66 E-value=4.4e-08 Score=80.71 Aligned_cols=116 Identities=11% Similarity=0.191 Sum_probs=90.9
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCC
Q psy16020 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t 90 (151)
++|.++.+. +..+..|-.+|.|.+|+.+ ....+.++- .+.+.||+|++. ++..+++| +|.|.|||..-
T Consensus 139 s~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn------mnnVk~~~a-hh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~ 211 (464)
T KOG0284|consen 139 SPVRTMKWSHNGTWMISGDKGGMIKYWQPN------MNNVKIIQA-HHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM 211 (464)
T ss_pred ccceeEEEccCCCEEEEcCCCceEEecccc------hhhhHHhhH-hhhhhhheeccCCCCceeEEecCCCeEEEEeccC
Confidence 588888775 4468888888899998764 222222222 223899999997 45677777 57999999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.+-++.+.+|.- -|.++..-+. +..+|+++|+.|++||++|++++..+
T Consensus 212 ~kee~vL~GHgw---dVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tl 260 (464)
T KOG0284|consen 212 PKEERVLRGHGW---DVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATL 260 (464)
T ss_pred CchhheeccCCC---CcceeccCCccceeEEccCCceeEeecCCCcchhhhh
Confidence 999999999964 7888888754 77899999999999999999998776
No 58
>KOG1273|consensus
Probab=98.66 E-value=6.6e-08 Score=77.77 Aligned_cols=82 Identities=13% Similarity=0.272 Sum_probs=73.8
Q ss_pred eEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeee
Q psy16020 65 VRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 65 V~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~ 140 (151)
-.|+.+. ++.|.+||. ++|.|||..|..+-+.|.+|.. +|+++.++.+|- +++.++|..+.+||...+.+++.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~---pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~r 102 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVR---PITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKR 102 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhcccc---ceeEEEecCCCCEeeeecCCceeEEEeccCCCceeE
Confidence 5677776 688999996 5999999999999999999986 999999997766 89999999999999999999999
Q ss_pred EeCCccccc
Q psy16020 141 VDIEPYVSK 149 (151)
Q Consensus 141 idi~~~v~~ 149 (151)
|-+..++-+
T Consensus 103 irf~spv~~ 111 (405)
T KOG1273|consen 103 IRFDSPVWG 111 (405)
T ss_pred EEccCccce
Confidence 999888754
No 59
>KOG0319|consensus
Probab=98.66 E-value=3.2e-07 Score=80.08 Aligned_cols=116 Identities=16% Similarity=0.258 Sum_probs=86.7
Q ss_pred ceeeeEEeCCeEEEEe--cCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC-CEEE-EEeC-CeEEEEeCCC
Q psy16020 17 TALPPVHVQGRVVCAL--ADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY-NKVW-CGYK-NKIHVVDPKS 90 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl--~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~-~~Lw-~g~~-n~I~vid~~t 90 (151)
-|.|..+.+|.-.+|+ .|-+..+ |+++..... .|.++..-|-|+.+.. +++- .+++ .+|++|...+
T Consensus 465 dIN~Vaia~ndkLiAT~SqDktaKi--------W~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~ 536 (775)
T KOG0319|consen 465 DINCVAIAPNDKLIATGSQDKTAKI--------WDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIST 536 (775)
T ss_pred cccceEecCCCceEEecccccceee--------ecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecc
Confidence 4566666666533333 3334444 555544333 5667789999999975 5544 4445 4799999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
+.+.++|++|+. .|....+..+|- ++|++.|+.+++|+..|.++++.+|.
T Consensus 537 fSClkT~eGH~~---aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~ 587 (775)
T KOG0319|consen 537 FSCLKTFEGHTS---AVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA 587 (775)
T ss_pred ceeeeeecCccc---eeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh
Confidence 999999999975 787777775554 99999999999999999999999984
No 60
>KOG0265|consensus
Probab=98.66 E-value=4.3e-07 Score=72.47 Aligned_cols=126 Identities=17% Similarity=0.221 Sum_probs=99.1
Q ss_pred eeeeCC-CceeeeEEe--CCeEEEEecCCcEEEEEcCC--------------------------------CC---CCCCC
Q psy16020 10 PLNKIL-DTALPPVHV--QGRVVCALADGSVAIFRRGP--------------------------------DG---QWDLS 51 (151)
Q Consensus 10 ~~i~l~-~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~--------------------------------~~---~wd~~ 51 (151)
|.+++. .+|..+.+. ++.||.+..|-+|++|+-.. |+ .||..
T Consensus 84 ~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R 163 (338)
T KOG0265|consen 84 WVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR 163 (338)
T ss_pred eeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence 445665 699999885 45799999999999997652 12 25555
Q ss_pred cceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeE
Q psy16020 52 KYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTL 127 (151)
Q Consensus 52 ~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l 127 (151)
....+++...+.++++..+.+ +++..|- +|.|.+||+...+....+.+|.| .|+.|..+++|- .+|-+-|+++
T Consensus 164 ~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~D---tIt~lsls~~gs~llsnsMd~tv 240 (338)
T KOG0265|consen 164 KKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHAD---TITGLSLSRYGSFLLSNSMDNTV 240 (338)
T ss_pred ccchhhccccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccC---ceeeEEeccCCCccccccccceE
Confidence 555555554468888888874 7777766 78999999999999999999998 999999998877 7788899999
Q ss_pred EEEeCCcccee
Q psy16020 128 RMYNAHTYQHL 138 (151)
Q Consensus 128 ~lwd~~t~~~l 138 (151)
++||.+-+-+-
T Consensus 241 rvwd~rp~~p~ 251 (338)
T KOG0265|consen 241 RVWDVRPFAPS 251 (338)
T ss_pred EEEEecccCCC
Confidence 99999965443
No 61
>KOG0646|consensus
Probab=98.65 E-value=4.5e-07 Score=75.67 Aligned_cols=126 Identities=10% Similarity=0.094 Sum_probs=96.8
Q ss_pred eeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEE-eCCCCCceEEEeeeC--CEEEEEe-CCeE
Q psy16020 10 PLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHHSVRSLAAVY--NKVWCGY-KNKI 83 (151)
Q Consensus 10 ~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-l~~~~~pV~~m~~v~--~~Lw~g~-~n~I 83 (151)
+.+-+|.+|.||...+ .+|++|+-.|.|.+|+.+.+. .+. +..+.++|+|+.+.+ ..+..|+ ++.|
T Consensus 76 q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~--------LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V 147 (476)
T KOG0646|consen 76 QYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGI--------LLNVLSAHYQSITCLKFSDDGSHIITGSKDGAV 147 (476)
T ss_pred hhcccccceeeeecCCCceEEEeecccCcEEEEEecccc--------HHHHHHhhccceeEEEEeCCCcEEEecCCCccE
Confidence 3567899999998864 468888789999999986432 222 233459999999985 3466666 4689
Q ss_pred EEEeCC---------CCcEEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 84 HVVDPK---------SLVVLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 84 ~vid~~---------t~~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
+||+.. +-+..+.|..|+. +|+.|..... +..+|.+.|.++|+||...+.+|.+|-+-..
T Consensus 148 ~vW~l~~lv~a~~~~~~~p~~~f~~Htl---sITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~s 219 (476)
T KOG0646|consen 148 LVWLLTDLVSADNDHSVKPLHIFSDHTL---SITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSS 219 (476)
T ss_pred EEEEEEeecccccCCCccceeeeccCcc---eeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCc
Confidence 999754 3346778888986 9999999844 4588999999999999999999999864433
No 62
>KOG0275|consensus
Probab=98.65 E-value=1.9e-08 Score=81.29 Aligned_cols=120 Identities=18% Similarity=0.258 Sum_probs=93.9
Q ss_pred CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeC
Q psy16020 14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDP 88 (151)
Q Consensus 14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~ 88 (151)
+.++|+||.+..+ .+-.|..||.|.||+...+-+ ...+.- .+..-|+|+.+.. +++--++ +-.+.+--.
T Consensus 262 md~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~C-----lRrFdr-AHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGl 335 (508)
T KOG0275|consen 262 MDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQC-----LRRFDR-AHTKGVTCLSFSRDNSQILSASFDQTVRIHGL 335 (508)
T ss_pred cccceEEEeecccHHHhhccCcCCcEEEEEEecchH-----HHHhhh-hhccCeeEEEEccCcchhhcccccceEEEecc
Confidence 3479999999765 477888899999998753221 011111 1348899999974 4555555 567888889
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
++|++++.|.+|+. .|+...+..+|- .+|++.|+++++||..|.++++++.
T Consensus 336 KSGK~LKEfrGHsS---yvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk 387 (508)
T KOG0275|consen 336 KSGKCLKEFRGHSS---YVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFK 387 (508)
T ss_pred ccchhHHHhcCccc---cccceEEcCCCCeEEEecCCccEEEecCcchhhhhhcc
Confidence 99999999999974 899999997776 7899999999999999999998873
No 63
>KOG0263|consensus
Probab=98.64 E-value=3.6e-07 Score=79.93 Aligned_cols=115 Identities=13% Similarity=0.133 Sum_probs=84.1
Q ss_pred ceeeeEEeCC-eEE-EEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEeC-CeEEEEeCCCC
Q psy16020 17 TALPPVHVQG-RVV-CALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGYK-NKIHVVDPKSL 91 (151)
Q Consensus 17 ~V~~i~~~~~-~v~-vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~~-n~I~vid~~t~ 91 (151)
||=+..+.+. +-| .|..|++-++|.-+ ...|..+-.| +.+-|.|..++.|. +..|+. ..+.+||..+|
T Consensus 495 PVwdV~F~P~GyYFatas~D~tArLWs~d------~~~PlRifag-hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G 567 (707)
T KOG0263|consen 495 PVWDVQFAPRGYYFATASHDQTARLWSTD------HNKPLRIFAG-HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG 567 (707)
T ss_pred ceeeEEecCCceEEEecCCCceeeeeecc------cCCchhhhcc-cccccceEEECCcccccccCCCCceEEEEEcCCC
Confidence 4444455443 223 33445566666543 2334444444 35889999998755 555553 47999999999
Q ss_pred cEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
...|.|.+|+. +|.+|++++.|. +.|++.|+.|++||..+++++..+
T Consensus 568 ~~VRiF~GH~~---~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l 615 (707)
T KOG0263|consen 568 NSVRIFTGHKG---PVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQL 615 (707)
T ss_pred cEEEEecCCCC---ceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhh
Confidence 99999999985 999999999999 688999999999999998776554
No 64
>KOG0277|consensus
Probab=98.63 E-value=8.6e-07 Score=69.61 Aligned_cols=126 Identities=17% Similarity=0.211 Sum_probs=90.4
Q ss_pred eeeeeeCCCceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CC-EEEEEeC-
Q psy16020 8 PYPLNKILDTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YN-KVWCGYK- 80 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~-~Lw~g~~- 80 (151)
...+....|.++++... +++|+++.+||+|.+|+.... +.| ......++..|.++... .+ .+-.+++
T Consensus 53 e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~-----s~P-i~~~kEH~~EV~Svdwn~~~r~~~ltsSWD 126 (311)
T KOG0277|consen 53 ECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMP-----SKP-IHKFKEHKREVYSVDWNTVRRRIFLTSSWD 126 (311)
T ss_pred EEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCC-----Ccc-hhHHHhhhhheEEeccccccceeEEeeccC
Confidence 34445566899999775 568999999999999985421 111 11222345666666664 23 3556664
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
++|++||+.-.+-.++|.+|.+ .|...+.++ .+++.|++.|+++++||.+..-.-+.|.
T Consensus 127 ~TiKLW~~~r~~Sv~Tf~gh~~---~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ 187 (311)
T KOG0277|consen 127 GTIKLWDPNRPNSVQTFNGHNS---CIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIE 187 (311)
T ss_pred CceEeecCCCCcceEeecCCcc---EEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEE
Confidence 6999999999999999999965 788888874 4779999999999999999743333353
No 65
>KOG0640|consensus
Probab=98.62 E-value=1e-07 Score=76.71 Aligned_cols=120 Identities=13% Similarity=0.232 Sum_probs=92.1
Q ss_pred CCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCC
Q psy16020 15 LDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPK 89 (151)
Q Consensus 15 ~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~ 89 (151)
-|.|.++.+++.. +.-|.-|++|..|+..+ ....+.+++....+||||+.++ ++.|-+|.+ +.++++|.+
T Consensus 172 ~devn~l~FHPre~ILiS~srD~tvKlFDfsK-----~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~ 246 (430)
T KOG0640|consen 172 VDEVNDLDFHPRETILISGSRDNTVKLFDFSK-----TSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVN 246 (430)
T ss_pred cCcccceeecchhheEEeccCCCeEEEEeccc-----HHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEecc
Confidence 3789999998753 55666689999998852 1222345554334999999997 467999997 589999999
Q ss_pred CCcEEEEEE---ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 90 SLVVLKSFD---AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 90 t~~i~~~~~---~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
|.|+--+-. .|+ ..|+++.++..|- +++++.|+.|+|||--+.+++..|.
T Consensus 247 T~QcfvsanPd~qht---~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~ 300 (430)
T KOG0640|consen 247 TYQCFVSANPDDQHT---GAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIG 300 (430)
T ss_pred ceeEeeecCcccccc---cceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHH
Confidence 999754432 344 3799999997765 9999999999999999888887774
No 66
>KOG0303|consensus
Probab=98.59 E-value=6e-07 Score=73.99 Aligned_cols=121 Identities=19% Similarity=0.210 Sum_probs=90.9
Q ss_pred CceeeeEEe--CCeEEEE-ecCCcEEEEEcCCCCC-CCCCcceEEEeCCCCCceEEEeeeC---CE-EEEEeCCeEEEEe
Q psy16020 16 DTALPPVHV--QGRVVCA-LADGSVAIFRRGPDGQ-WDLSKYHTVTLGLPHHSVRSLAAVY---NK-VWCGYKNKIHVVD 87 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~vg-l~nG~l~v~~~~~~~~-wd~~~~~~i~l~~~~~pV~~m~~v~---~~-Lw~g~~n~I~vid 87 (151)
.+|+++... +++++++ ..|-+|.||+...+|. -++..| .+.|-.++..|--++.+. |- +=+||+|.|.+||
T Consensus 82 ~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltep-vv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWn 160 (472)
T KOG0303|consen 82 APVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEP-VVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWN 160 (472)
T ss_pred ccccccccCccCCceeecCCCCceEEEEECCCcccccCcccc-eEEEeecceeEEEEeecccchhhHhhccCCceEEEEe
Confidence 588888763 3456655 4556899999876553 233333 334444456676666653 44 3467789999999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
..|++..-++. |+| .|..|.+.-+|- +++..+|-.||+||.++++.+++=
T Consensus 161 v~tgeali~l~-hpd---~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~ 211 (472)
T KOG0303|consen 161 VGTGEALITLD-HPD---MVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG 211 (472)
T ss_pred ccCCceeeecC-CCC---eEEEEEeccCCceeeeecccceeEEEcCCCCcEeeec
Confidence 99999888888 987 999999996655 899999999999999999998875
No 67
>KOG0285|consensus
Probab=98.58 E-value=9.9e-07 Score=72.09 Aligned_cols=115 Identities=15% Similarity=0.110 Sum_probs=85.7
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEe-CCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCC
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~ 89 (151)
..|-.+...+. ++|.++.|+.|..|+. +.-+.|.- ..+=+.|.|+.+.. +.|..|. +..+.|||.+
T Consensus 194 ~~vr~vavS~rHpYlFs~gedk~VKCwDL--------e~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR 265 (460)
T KOG0285|consen 194 ETVRGVAVSKRHPYLFSAGEDKQVKCWDL--------EYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR 265 (460)
T ss_pred heeeeeeecccCceEEEecCCCeeEEEec--------hhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeec
Confidence 45555555443 7999999998877654 44445543 23348899999984 6676655 4689999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|......+.+|.+ .|..+.+- -++-.++++.|++|||||.+-++-...+
T Consensus 266 tr~~V~~l~GH~~---~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tl 315 (460)
T KOG0285|consen 266 TRASVHVLSGHTN---PVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITL 315 (460)
T ss_pred ccceEEEecCCCC---cceeEEeecCCCceEEecCCceEEEeeeccCceeEee
Confidence 9999999999987 67776665 2444789999999999999977766554
No 68
>KOG0649|consensus
Probab=98.57 E-value=2.9e-06 Score=66.50 Aligned_cols=136 Identities=11% Similarity=0.041 Sum_probs=97.5
Q ss_pred CCCceeeeeeCCCce--------eeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcce-EEEeCCCCCceEEEeee-
Q psy16020 4 PHPTPYPLNKILDTA--------LPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYH-TVTLGLPHHSVRSLAAV- 71 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V--------~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~-~i~l~~~~~pV~~m~~v- 71 (151)
-+.+.+|+++.|..+ ..|.- .+|.++.|.+||.+.-++.. .-+ ...+..+..=|.|++.-
T Consensus 95 ~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE--------~G~i~r~~rGHtDYvH~vv~R~ 166 (325)
T KOG0649|consen 95 LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLE--------DGRIQREYRGHTDYVHSVVGRN 166 (325)
T ss_pred ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEec--------CCEEEEEEcCCcceeeeeeecc
Confidence 356778888877433 33332 46677777788887777653 222 22444445667888773
Q ss_pred -CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCC-------CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 72 -YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRR-------ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 72 -~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~-------~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.++..|.. +.+++||++|.|..+.++...+. .+-|-+++. +.-|+-|+..+.+-|||.++-++.+.|.
T Consensus 167 ~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGgGp~lslwhLrsse~t~vfp 244 (325)
T KOG0649|consen 167 ANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGGPKLSLWHLRSSESTCVFP 244 (325)
T ss_pred cCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecCCCceeEEeccCCCceEEEe
Confidence 478888885 79999999999999999976432 122445544 4449999999999999999999999999
Q ss_pred CCccccc
Q psy16020 143 IEPYVSK 149 (151)
Q Consensus 143 i~~~v~~ 149 (151)
|..+++.
T Consensus 245 ipa~v~~ 251 (325)
T KOG0649|consen 245 IPARVHL 251 (325)
T ss_pred cccceeE
Confidence 9887753
No 69
>KOG0284|consensus
Probab=98.55 E-value=1.9e-07 Score=76.97 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=87.9
Q ss_pred CceeeeEEeCC-eEE-EEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCC
Q psy16020 16 DTALPPVHVQG-RVV-CALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~-~v~-vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t 90 (151)
.+|.|+.+.++ ..| .+..||+|.||+... ....-.|..+..-|+|+.-+. +.|..|+. |-|..||++|
T Consensus 181 eaIRdlafSpnDskF~t~SdDg~ikiWdf~~-------~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS 253 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM-------PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS 253 (464)
T ss_pred hhhheeccCCCCceeEEecCCCeEEEEeccC-------CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC
Confidence 57888888644 344 455579999987541 111223455568899998875 55777774 6799999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
++++.++.+|++ .|..+++.+++- ++++++|..+++||.++-+.++.+
T Consensus 254 g~cl~tlh~HKn---tVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~ 302 (464)
T KOG0284|consen 254 GSCLATLHGHKN---TVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTY 302 (464)
T ss_pred cchhhhhhhccc---eEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHh
Confidence 999999999986 899999997766 689999999999999976655544
No 70
>KOG0275|consensus
Probab=98.54 E-value=5.5e-08 Score=78.65 Aligned_cols=129 Identities=18% Similarity=0.191 Sum_probs=100.5
Q ss_pred eeeeeCC--CceeeeEEeC--CeEEEEecCCcEEEEEcCCCC-CCCCCcc--eEEEeCCCCCceEEEeeeCC-E-EEEEe
Q psy16020 9 YPLNKIL--DTALPPVHVQ--GRVVCALADGSVAIFRRGPDG-QWDLSKY--HTVTLGLPHHSVRSLAAVYN-K-VWCGY 79 (151)
Q Consensus 9 l~~i~l~--~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~-~wd~~~~--~~i~l~~~~~pV~~m~~v~~-~-Lw~g~ 79 (151)
-++||.. +-+-|-.+.+ +++..|..||-|-||+.-.+. ..|++.+ ..+-.-+ .+|.||.+..+ + |..|+
T Consensus 205 ~r~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd--~aVlci~FSRDsEMlAsGs 282 (508)
T KOG0275|consen 205 ARSIKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMD--DAVLCISFSRDSEMLASGS 282 (508)
T ss_pred hhheecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecc--cceEEEeecccHHHhhccC
Confidence 3566665 5677777764 478999999999999886432 2333322 2333344 89999999853 3 66777
Q ss_pred -CCeEEEEeCCCCcEEEEEE-ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 80 -KNKIHVVDPKSLVVLKSFD-AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 80 -~n~I~vid~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+++|.||-.+||++.++|+ +|+. .|+|+.++.++- .+|.+.|-++|+--..++++++++.
T Consensus 283 qDGkIKvWri~tG~ClRrFdrAHtk---Gvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfr 345 (508)
T KOG0275|consen 283 QDGKIKVWRIETGQCLRRFDRAHTK---GVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFR 345 (508)
T ss_pred cCCcEEEEEEecchHHHHhhhhhcc---CeeEEEEccCcchhhcccccceEEEeccccchhHHHhc
Confidence 4799999999999999999 8975 899999997766 7899999999999999999998873
No 71
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.54 E-value=1.6e-05 Score=61.47 Aligned_cols=128 Identities=11% Similarity=0.164 Sum_probs=80.9
Q ss_pred ceeeeeeCCCceeeeEEe--CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCC---CC---CceEEEeee--CCEE
Q psy16020 7 TPYPLNKILDTALPPVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGL---PH---HSVRSLAAV--YNKV 75 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~--~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~---~~---~pV~~m~~v--~~~L 75 (151)
+++..+..+..+.++.+. +..+|++.. +|.|.+|+...+. ....+.... +. .|. .+.+. ++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~-----~~~~~~~~~~~~~~~~~~~~-~i~~s~dg~~~ 221 (300)
T TIGR03866 148 EIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRK-----VIKKITFEIPGVHPEAVQPV-GIKLTKDGKTA 221 (300)
T ss_pred eEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcce-----eeeeeeecccccccccCCcc-ceEECCCCCEE
Confidence 334444444445555554 335766654 8899999875321 112222211 00 222 23343 4567
Q ss_pred EEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 76 WCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 76 w~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
|++.+ ++|.+||.+++++.+.+..+ ..+.++.++++| ++++.+.++.|++||.+++++++.|.+-
T Consensus 222 ~~~~~~~~~i~v~d~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 222 FVALGPANRVAVVDAKTYEVLDYLLVG----QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG 290 (300)
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEeC----CCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence 87763 68999999999988776533 268888887654 4445567999999999999999988653
No 72
>KOG0282|consensus
Probab=98.54 E-value=1.7e-07 Score=78.48 Aligned_cols=116 Identities=14% Similarity=0.161 Sum_probs=89.7
Q ss_pred CceeeeEEeCC--e-EEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC---CEEEEEeCCeEEEEeC
Q psy16020 16 DTALPPVHVQG--R-VVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY---NKVWCGYKNKIHVVDP 88 (151)
Q Consensus 16 ~~V~~i~~~~~--~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~---~~Lw~g~~n~I~vid~ 88 (151)
..|.+|.+.+. + +..|..||.|.+|+.-.+ .+.+ ....+..||+.+.+.. .-|=+|++..|+.||+
T Consensus 215 kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~-------~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDt 287 (503)
T KOG0282|consen 215 KGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD-------RRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDT 287 (503)
T ss_pred cccchhhhccceeeEEEecCCCceEEEEEEecC-------cceehhhhcchhhhhhhhccccCCeeeeeecceeeeeecc
Confidence 57777777653 3 556667899999986422 2233 2334569999999974 3366777899999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+||++..+|+-. ..++|+.+-++ .+++++..|+.|+.||.++.+.+|++|
T Consensus 288 ETG~~~~~f~~~----~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd 339 (503)
T KOG0282|consen 288 ETGQVLSRFHLD----KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYD 339 (503)
T ss_pred ccceEEEEEecC----CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHH
Confidence 999999999844 37888888755 579999999999999999999999875
No 73
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.53 E-value=5.9e-06 Score=67.67 Aligned_cols=128 Identities=20% Similarity=0.140 Sum_probs=89.1
Q ss_pred CCceeeeeeCCCce------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEE
Q psy16020 5 HPTPYPLNKILDTA------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC 77 (151)
Q Consensus 5 ~~~~l~~i~l~~~V------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~ 77 (151)
+.+.+|+.++.+.+ ......++++|++..+|.|..|+...+. .|..+ ++. ......+..++++|+
T Consensus 39 ~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~------~~~--~~~~~p~v~~~~v~v 110 (377)
T TIGR03300 39 KVDQVWSASVGDGVGHYYLRLQPAVAGGKVYAADADGTVVALDAETGKRLWRVD------LDE--RLSGGVGADGGLVFV 110 (377)
T ss_pred cceeeeEEEcCCCcCccccccceEEECCEEEEECCCCeEEEEEccCCcEeeeec------CCC--CcccceEEcCCEEEE
Confidence 46789999998766 3567789999999999999999865322 46443 322 111223445789999
Q ss_pred EeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 78 GYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
++. +.++.+|++|+++.-+...... ........++.+ +....++.|..||.++++.+.+.+..
T Consensus 111 ~~~~g~l~ald~~tG~~~W~~~~~~~---~~~~p~v~~~~v-~v~~~~g~l~a~d~~tG~~~W~~~~~ 174 (377)
T TIGR03300 111 GTEKGEVIALDAEDGKELWRAKLSSE---VLSPPLVANGLV-VVRTNDGRLTALDAATGERLWTYSRV 174 (377)
T ss_pred EcCCCEEEEEECCCCcEeeeeccCce---eecCCEEECCEE-EEECCCCeEEEEEcCCCceeeEEccC
Confidence 985 6999999999998766553321 112222334544 45667899999999999988877654
No 74
>KOG2111|consensus
Probab=98.53 E-value=7.9e-06 Score=65.76 Aligned_cols=127 Identities=15% Similarity=0.185 Sum_probs=96.4
Q ss_pred CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeCCEEEEEe-C---
Q psy16020 6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYNKVWCGY-K--- 80 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~~~Lw~g~-~--- 80 (151)
.+|+-++....+|.++....+++.|.| .+.|.||.... |++..+.+.... | .-+-+|....++-..+| |
T Consensus 85 ~~~i~el~f~~~I~~V~l~r~riVvvl-~~~I~VytF~~----n~k~l~~~et~~NP-kGlC~~~~~~~k~~LafPg~k~ 158 (346)
T KOG2111|consen 85 ERCIIELSFNSEIKAVKLRRDRIVVVL-ENKIYVYTFPD----NPKLLHVIETRSNP-KGLCSLCPTSNKSLLAFPGFKT 158 (346)
T ss_pred CcEEEEEEeccceeeEEEcCCeEEEEe-cCeEEEEEcCC----ChhheeeeecccCC-CceEeecCCCCceEEEcCCCcc
Confidence 578889999999999999999999999 67999998863 233334444333 4 33666666656655555 3
Q ss_pred CeEEEEeCCCCcE--EEEEEecCCCCCceeEEEEeCCEE-EEEEcCCC-eEEEEeCCccceeeeE
Q psy16020 81 NKIHVVDPKSLVV--LKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDS-TLRMYNAHTYQHLQDV 141 (151)
Q Consensus 81 n~I~vid~~t~~i--~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~-~l~lwd~~t~~~l~~i 141 (151)
++|.|.|....+. -..+.||. +.|.||...-+|- ..|++.-+ .||+||++++++++|+
T Consensus 159 GqvQi~dL~~~~~~~p~~I~AH~---s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~ 220 (346)
T KOG2111|consen 159 GQVQIVDLASTKPNAPSIINAHD---SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQEL 220 (346)
T ss_pred ceEEEEEhhhcCcCCceEEEccc---CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeee
Confidence 6899999887666 47788995 4899999996665 56666655 5899999999999986
No 75
>KOG1274|consensus
Probab=98.53 E-value=1.6e-06 Score=77.32 Aligned_cols=119 Identities=9% Similarity=0.094 Sum_probs=97.6
Q ss_pred CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC--EEEEEeCC-eEEEEeCCC
Q psy16020 14 ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGYKN-KIHVVDPKS 90 (151)
Q Consensus 14 l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~--~Lw~g~~n-~I~vid~~t 90 (151)
..+.|.+|....+++.+|..+++|.+|...+. +....+.=.. .|+|++++.++ .+.+|+++ -|.+++..+
T Consensus 55 ~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~-----~~~~iL~Rft--lp~r~~~v~g~g~~iaagsdD~~vK~~~~~D 127 (933)
T KOG1274|consen 55 SGELVSSIACYSNHFLTGSEQNTVLRYKFPSG-----EEDTILARFT--LPIRDLAVSGSGKMIAAGSDDTAVKLLNLDD 127 (933)
T ss_pred cCceeEEEeecccceEEeeccceEEEeeCCCC-----Cccceeeeee--ccceEEEEecCCcEEEeecCceeEEEEeccc
Confidence 55789999999999999999999999988632 2222333333 89999999864 57777766 699999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
...++.+.+|.. +|.++.+.+++- +.+..-||.|++||..++.+...+.
T Consensus 128 ~s~~~~lrgh~a---pVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~ 177 (933)
T KOG1274|consen 128 SSQEKVLRGHDA---PVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLT 177 (933)
T ss_pred cchheeecccCC---ceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence 999999999964 999999998877 6777889999999999888776653
No 76
>KOG0289|consensus
Probab=98.53 E-value=3.4e-06 Score=70.25 Aligned_cols=121 Identities=13% Similarity=0.240 Sum_probs=89.7
Q ss_pred CceeeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeeeCCEEEEEeC---CeEEEEeC
Q psy16020 16 DTALPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAVYNKVWCGYK---NKIHVVDP 88 (151)
Q Consensus 16 ~~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v~~~Lw~g~~---n~I~vid~ 88 (151)
.+|..+.- .++++..+..||+.+..+...+. ....+.+ +.-.+++.+++.+-|-.|.| +.|.+||.
T Consensus 304 ~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~-------~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdl 376 (506)
T KOG0289|consen 304 EPVTGLSLHPTGEYLLSASNDGTWAFSDISSGS-------QLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDL 376 (506)
T ss_pred ccceeeeeccCCcEEEEecCCceEEEEEccCCc-------EEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEc
Confidence 34555543 34577777778888887764321 2233333 23558999999766555554 58999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEE-EEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
++......|.+|+. +|..+.++.+|-|+ +..+|+.|++||.+..+..++|.+...
T Consensus 377 ks~~~~a~Fpght~---~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~ 432 (506)
T KOG0289|consen 377 KSQTNVAKFPGHTG---PVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEK 432 (506)
T ss_pred CCccccccCCCCCC---ceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecccc
Confidence 99999999999985 99999999999865 556777799999999998888877654
No 77
>KOG0273|consensus
Probab=98.52 E-value=2.3e-06 Score=71.72 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=82.1
Q ss_pred CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEE-eCCeEEEEeCC
Q psy16020 14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCG-YKNKIHVVDPK 89 (151)
Q Consensus 14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g-~~n~I~vid~~ 89 (151)
.+.||++|+..+ +++..|..||++.+|+... |.| ...+++.. .|---+.-.+ ++..+. .++.|+|+-..
T Consensus 275 HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~-g~~----~q~f~~~s--~~~lDVdW~~~~~F~ts~td~~i~V~kv~ 347 (524)
T KOG0273|consen 275 HKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT-GTV----KQQFEFHS--APALDVDWQSNDEFATSSTDGCIHVCKVG 347 (524)
T ss_pred cCCceEEEEEcCCCCEEEeccCCccEEEEeccC-ceE----EEeeeecc--CCccceEEecCceEeecCCCceEEEEEec
Confidence 447999999975 5799999999999998643 322 23455554 5511122233 443332 25789999888
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t 134 (151)
--...++|.+|++ .|++|.+.+.|. +.|++.|+++++|+-..
T Consensus 348 ~~~P~~t~~GH~g---~V~alk~n~tg~LLaS~SdD~TlkiWs~~~ 390 (524)
T KOG0273|consen 348 EDRPVKTFIGHHG---EVNALKWNPTGSLLASCSDDGTLKIWSMGQ 390 (524)
T ss_pred CCCcceeeecccC---ceEEEEECCCCceEEEecCCCeeEeeecCC
Confidence 8889999999986 999999996655 89999999999999543
No 78
>KOG0292|consensus
Probab=98.52 E-value=4.9e-07 Score=80.65 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=94.5
Q ss_pred CceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeCCE-EEEEeCC--eEEEEeCC
Q psy16020 16 DTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVYNK-VWCGYKN--KIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~~~-Lw~g~~n--~I~vid~~ 89 (151)
+.|-.|.+++.+ +.++|-+|.|-.|++..+- .+ +.-.+..|||.+.++..+ |+++.|+ +|.|||-+
T Consensus 10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~t--------li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk 81 (1202)
T KOG0292|consen 10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGT--------LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK 81 (1202)
T ss_pred ccccceecCCCCCEEEEeecCceeeeehhhhhh--------HHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc
Confidence 456778888876 9999999999998875321 11 233456999999999866 8888874 89999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeCCccceeeeE
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~~t~~~l~~i 141 (151)
+.++.-++.+|-| +|....+-...=| +|+++|-+||+|+..+.+++..+
T Consensus 82 ~rrclftL~GHlD---YVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavl 131 (1202)
T KOG0292|consen 82 TRRCLFTLLGHLD---YVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVL 131 (1202)
T ss_pred cceehhhhccccc---eeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEE
Confidence 9999999999977 9999888866555 69999999999999999988765
No 79
>KOG2048|consensus
Probab=98.50 E-value=1.1e-05 Score=70.10 Aligned_cols=129 Identities=14% Similarity=0.124 Sum_probs=100.2
Q ss_pred CCceeeeeeCC--CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020 5 HPTPYPLNKIL--DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY 79 (151)
Q Consensus 5 ~~~~l~~i~l~--~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~ 79 (151)
.|=+...|..| .+|-.|++. ++++|-...||+|.-|+.. +++....++... .+|=+|+..+ +.+-+||
T Consensus 57 ~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~-----~lk~~~~~d~~g--g~IWsiai~p~~~~l~Igc 129 (691)
T KOG2048|consen 57 NWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLH-----TLKQKYNIDSNG--GAIWSIAINPENTILAIGC 129 (691)
T ss_pred CceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecc-----cCceeEEecCCC--cceeEEEeCCccceEEeec
Confidence 34455666777 599999998 7799999999999999876 334444445544 8999999974 7799999
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+ +-++.++....+++....-- +..+.|.++.+.+++. .++++.|+.|++||+.+++-+.-+
T Consensus 130 ddGvl~~~s~~p~~I~~~r~l~-rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~ 192 (691)
T KOG2048|consen 130 DDGVLYDFSIGPDKITYKRSLM-RQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHII 192 (691)
T ss_pred CCceEEEEecCCceEEEEeecc-cccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEe
Confidence 6 47888888888776553321 2235899999999999 899999999999999998887733
No 80
>KOG0319|consensus
Probab=98.50 E-value=2.6e-06 Score=74.50 Aligned_cols=122 Identities=13% Similarity=0.195 Sum_probs=93.2
Q ss_pred CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC----CCCCceEEEeeeC-CEEEE-EeCC-eEEE
Q psy16020 16 DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG----LPHHSVRSLAAVY-NKVWC-GYKN-KIHV 85 (151)
Q Consensus 16 ~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~----~~~~pV~~m~~v~-~~Lw~-g~~n-~I~v 85 (151)
.+|.++....+ .+..+..|++|-+|....+. +.+.|-.++.. .+..-|+|+++.+ ++|.| |+.+ ...+
T Consensus 412 ~svgava~~~~~asffvsvS~D~tlK~W~l~~s~--~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKi 489 (775)
T KOG0319|consen 412 NSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSK--ETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKI 489 (775)
T ss_pred cccceeeecccCccEEEEecCCceEEEecCCCcc--cccccceehhhHHHHhhcccccceEecCCCceEEecccccceee
Confidence 46666665433 45566779999999987422 33344444322 1359999999985 55554 4444 6999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
|+.+.++++.++.+|++ .|-++.++.. .+..+++.|.+|++|..++++++++++
T Consensus 490 W~le~~~l~~vLsGH~R---Gvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~e 544 (775)
T KOG0319|consen 490 WDLEQLRLLGVLSGHTR---GVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFE 544 (775)
T ss_pred ecccCceEEEEeeCCcc---ceEEEEeccccceeEeccCCceEEEEEeccceeeeeec
Confidence 99999999999999987 8999999855 569999999999999999999999996
No 81
>KOG0299|consensus
Probab=98.49 E-value=5.2e-06 Score=69.36 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=99.2
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCC----------------------------CC------CCCCCcc-eEEEe
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGP----------------------------DG------QWDLSKY-HTVTL 58 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~----------------------------~~------~wd~~~~-~~i~l 58 (151)
++|.+|.+..+ ++|++..|+++.+|+.+. +| -|++..- +.+--
T Consensus 245 ~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifr 324 (479)
T KOG0299|consen 245 GAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFR 324 (479)
T ss_pred cceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccceeeee
Confidence 79999998765 799999999999998762 11 3555222 22222
Q ss_pred CCCCCceEEEeeeC-CEEEEEeCC-eEEEEeCCCCcEEEEEE-ecCCCCC--------ceeEEEEe-CCEEEEEEcCCCe
Q psy16020 59 GLPHHSVRSLAAVY-NKVWCGYKN-KIHVVDPKSLVVLKSFD-AHPRRES--------QVRQMTWA-GDGVWVSIRLDST 126 (151)
Q Consensus 59 ~~~~~pV~~m~~v~-~~Lw~g~~n-~I~vid~~t~~i~~~~~-~h~~~~~--------~I~~m~~~-~~~vwis~~~d~~ 126 (151)
+ +..++-|.++++ +++-.|++| .|+.|++-..+++.+.. +|..... =|+.++.. +..+.+|++.++-
T Consensus 325 g-~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~ 403 (479)
T KOG0299|consen 325 G-GEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGC 403 (479)
T ss_pred C-CCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCc
Confidence 3 246999999986 668889875 89999999999776654 5643222 35555555 7788999999999
Q ss_pred EEEEeCCcc----ceeeeEeCCcccccc
Q psy16020 127 LRMYNAHTY----QHLQDVDIEPYVSKM 150 (151)
Q Consensus 127 l~lwd~~t~----~~l~~idi~~~v~~~ 150 (151)
||||-+.+. +++.++.+.-+|+++
T Consensus 404 vrLW~i~~g~r~i~~l~~ls~~GfVNsl 431 (479)
T KOG0299|consen 404 VRLWKIEDGLRAINLLYSLSLVGFVNSL 431 (479)
T ss_pred eEEEEecCCccccceeeecccccEEEEE
Confidence 999999874 888888887777653
No 82
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.43 E-value=8.2e-05 Score=56.46 Aligned_cols=134 Identities=16% Similarity=0.094 Sum_probs=91.8
Q ss_pred CCCCceeeeeeCC---Cceee-eEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEE-EeeeCCEEEE
Q psy16020 3 YPHPTPYPLNKIL---DTALP-PVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRS-LAAVYNKVWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~---~~V~~-i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~-m~~v~~~Lw~ 77 (151)
..+.+.+|+.++. ....+ ....++++|++..+|.|..|+... | +......+.. ++.. ....++.+++
T Consensus 10 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~t-G----~~~W~~~~~~---~~~~~~~~~~~~v~v 81 (238)
T PF13360_consen 10 PRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKT-G----KVLWRFDLPG---PISGAPVVDGGRVYV 81 (238)
T ss_dssp TTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTT-S----EEEEEEECSS---CGGSGEEEETTEEEE
T ss_pred CCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCC-C----CEEEEeeccc---cccceeeeccccccc
Confidence 3578899999983 23332 334788999999999999999743 2 2233445533 2222 3667899999
Q ss_pred EeC-CeEEEEeCCCCcEEEEE-EecCCC--CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 78 GYK-NKIHVVDPKSLVVLKSF-DAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 78 g~~-n~I~vid~~t~~i~~~~-~~h~~~--~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
++. +.|+.+|++|+++.-++ ...... ..........++.+. ....++.|..+|.++++.+.+..+..
T Consensus 82 ~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 82 GTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLY-VGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp EETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEE-EEETCSEEEEEETTTTEEEEEEESST
T ss_pred ccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEE-EEeccCcEEEEecCCCcEEEEeecCC
Confidence 985 68999999999998885 433111 112334445566654 55559999999999999999887743
No 83
>KOG0294|consensus
Probab=98.42 E-value=4.6e-06 Score=67.12 Aligned_cols=120 Identities=18% Similarity=0.142 Sum_probs=95.7
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----CEEEEEeC-CeEEEEeCCC
Q psy16020 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYK-NKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----~~Lw~g~~-n~I~vid~~t 90 (151)
.++.++.-..-+|-.|..|-+|.+|+..... +.=.|-.++..|+|+.+-. +.|-.|++ +.|.+|+..+
T Consensus 44 ~sitavAVs~~~~aSGssDetI~IYDm~k~~-------qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~ 116 (362)
T KOG0294|consen 44 GSITALAVSGPYVASGSSDETIHIYDMRKRK-------QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGS 116 (362)
T ss_pred cceeEEEecceeEeccCCCCcEEEEeccchh-------hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCC
Confidence 5889998888889999999999999875211 1112223569999999964 36776664 6999999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
.+..+++.+|+- +|+.+..-+.+- =+|.++|..+|+|+.-+++.-...++..
T Consensus 117 W~~~~slK~H~~---~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~ 169 (362)
T KOG0294|consen 117 WELLKSLKAHKG---QVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKN 169 (362)
T ss_pred eEEeeeeccccc---ccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCC
Confidence 999999999975 799999998776 5899999999999999887766665544
No 84
>KOG1446|consensus
Probab=98.41 E-value=4.2e-05 Score=61.34 Aligned_cols=132 Identities=15% Similarity=0.147 Sum_probs=87.8
Q ss_pred CceeeeeeCCCceeeeEEeCCeEEEEecCC--cEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeC--CEEEEEeC
Q psy16020 6 PTPYPLNKILDTALPPVHVQGRVVCALADG--SVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVY--NKVWCGYK 80 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG--~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~--~~Lw~g~~ 80 (151)
++|..-+.++....+ .|.+.-++.|+++| .|-+|+...- |-.+-..+.+.. .....+.|.+.+ +.+-++..
T Consensus 132 ~~cqg~l~~~~~pi~-AfDp~GLifA~~~~~~~IkLyD~Rs~---dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~ 207 (311)
T KOG1446|consen 132 KKCQGLLNLSGRPIA-AFDPEGLIFALANGSELIKLYDLRSF---DKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTN 207 (311)
T ss_pred CCCceEEecCCCcce-eECCCCcEEEEecCCCeEEEEEeccc---CCCCceeEccCCCCccceeeeEEcCCCCEEEEEeC
Confidence 344444444433322 44444455555555 4888988632 223445666763 347788888863 45666664
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEE-EEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQM-TWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m-~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.++++|+-+|+++.+|+.+++... +... .+.+++- .+++++|++|.+|+.++++......
T Consensus 208 ~s~~~~lDAf~G~~~~tfs~~~~~~~-~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~ 271 (311)
T KOG1446|consen 208 ASFIYLLDAFDGTVKSTFSGYPNAGN-LPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLR 271 (311)
T ss_pred CCcEEEEEccCCcEeeeEeeccCCCC-cceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEec
Confidence 6899999999999999999987432 2222 3346665 6789999999999999998887764
No 85
>KOG0973|consensus
Probab=98.40 E-value=7e-06 Score=74.05 Aligned_cols=124 Identities=15% Similarity=0.229 Sum_probs=93.4
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCC-CCCC---------CCCcceEEE-eCCCCCceEEEeee-CCEEEEEe--
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGP-DGQW---------DLSKYHTVT-LGLPHHSVRSLAAV-YNKVWCGY-- 79 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~-~~~w---------d~~~~~~i~-l~~~~~pV~~m~~v-~~~Lw~g~-- 79 (151)
.+|.|..+.++ ++..|..|+.|.||++.. ++.| +.+..+.+. +..+..-|.-+.-. ++.+-+.+
T Consensus 70 ~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~ 149 (942)
T KOG0973|consen 70 GSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSL 149 (942)
T ss_pred CceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecc
Confidence 68999988654 788899899999999983 1122 223333332 22334666555554 35555555
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 80 KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 80 ~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+|+|.+||..|++..+.+.+|.. .|.-+.+++-|- +.|.+.|.+|++|.+.+......|+
T Consensus 150 DnsViiwn~~tF~~~~vl~~H~s---~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It 210 (942)
T KOG0973|consen 150 DNSVIIWNAKTFELLKVLRGHQS---LVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSIT 210 (942)
T ss_pred cceEEEEccccceeeeeeecccc---cccceEECCccCeeeeecCCceEEEEEcccceeeEeec
Confidence 58999999999999999999974 899999998888 7889999999999999888777775
No 86
>KOG0296|consensus
Probab=98.39 E-value=7.5e-06 Score=66.89 Aligned_cols=115 Identities=18% Similarity=0.229 Sum_probs=86.5
Q ss_pred CCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEee---e--CCEEEEEeC-CeEE
Q psy16020 14 ILDTALPPVHVQGR--VVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA---V--YNKVWCGYK-NKIH 84 (151)
Q Consensus 14 l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~---v--~~~Lw~g~~-n~I~ 84 (151)
-+|+|.|+.++-.- +-.|-.+|.|.||.-..++ .|.+. +++.-|.- + ...|.+|+. +.+.
T Consensus 105 HKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~-----------~e~~dieWl~WHp~a~illAG~~DGsvW 173 (399)
T KOG0296|consen 105 HKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD-----------QEVEDIEWLKWHPRAHILLAGSTDGSVW 173 (399)
T ss_pred CCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee-----------cccCceEEEEecccccEEEeecCCCcEE
Confidence 34899999886544 4445556999999876443 33222 23333332 2 245888885 7999
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.|.+.+....+.|.+|+. ++++=.+.++|- .+++..|++|++|+..|++++-.+.
T Consensus 174 mw~ip~~~~~kv~~Gh~~---~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 174 MWQIPSQALCKVMSGHNS---PCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred EEECCCcceeeEecCCCC---CcccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 999999999999999964 788877777777 7789999999999999999999886
No 87
>KOG0295|consensus
Probab=98.39 E-value=1.3e-05 Score=65.46 Aligned_cols=109 Identities=17% Similarity=0.290 Sum_probs=82.0
Q ss_pred eCCeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC------------C-----EEEEEeCC-eEE
Q psy16020 24 VQGRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY------------N-----KVWCGYKN-KIH 84 (151)
Q Consensus 24 ~~~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~------------~-----~Lw~g~~n-~I~ 84 (151)
.++.++++.+|- +|.+|-..... ....+..++.||.|++... + -+-.|+.+ .|+
T Consensus 245 ~DGti~As~s~dqtl~vW~~~t~~-------~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk 317 (406)
T KOG0295|consen 245 QDGTIIASCSNDQTLRVWVVATKQ-------CKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIK 317 (406)
T ss_pred CCeeEEEecCCCceEEEEEeccch-------hhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEE
Confidence 355677776654 57777654211 1123445668888887741 1 35555654 799
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+||..|+.++-++.+|-+ -|..+++++.|- .+|+.+|.+|++||.+..+++..++
T Consensus 318 ~wdv~tg~cL~tL~ghdn---wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ 373 (406)
T KOG0295|consen 318 IWDVSTGMCLFTLVGHDN---WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE 373 (406)
T ss_pred EEeccCCeEEEEEecccc---eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC
Confidence 999999999999999965 899999996666 7899999999999999999999887
No 88
>KOG0305|consensus
Probab=98.38 E-value=2.8e-06 Score=72.37 Aligned_cols=135 Identities=16% Similarity=0.128 Sum_probs=105.2
Q ss_pred CceeeeeeC--CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEE-eCCCCCceEEEeeeCCEEEEEeC--
Q psy16020 6 PTPYPLNKI--LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHHSVRSLAAVYNKVWCGYK-- 80 (151)
Q Consensus 6 ~~~l~~i~l--~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-l~~~~~pV~~m~~v~~~Lw~g~~-- 80 (151)
.+.+..+.. ..-|-||......+-.|..+|.|..++..... ..+. +..+.+-|..|....+....++|
T Consensus 249 ~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~-------~~~~~~~~H~qeVCgLkws~d~~~lASGgn 321 (484)
T KOG0305|consen 249 QKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQ-------HVVSTLQGHRQEVCGLKWSPDGNQLASGGN 321 (484)
T ss_pred ccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecch-------hhhhhhhcccceeeeeEECCCCCeeccCCC
Confidence 344555555 46889999998899999999999999875321 1122 44456889889888665555553
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcC--CCeEEEEeCCccceeeeEeCCcccccc
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRL--DSTLRMYNAHTYQHLQDVDIEPYVSKM 150 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~--d~~l~lwd~~t~~~l~~idi~~~v~~~ 150 (151)
|.++|||..+.+.+.++..|.. .|.+|.+++ .+++++++. |..|++||+.++++++.+|...-|..+
T Consensus 322 DN~~~Iwd~~~~~p~~~~~~H~a---AVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL 393 (484)
T KOG0305|consen 322 DNVVFIWDGLSPEPKFTFTEHTA---AVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSL 393 (484)
T ss_pred ccceEeccCCCccccEEEeccce---eeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeE
Confidence 6899999999999999999975 899999994 577877765 899999999999999999987766543
No 89
>KOG1445|consensus
Probab=98.38 E-value=1.4e-06 Score=75.74 Aligned_cols=120 Identities=18% Similarity=0.198 Sum_probs=94.6
Q ss_pred eeCCCceeeeEEe---CCeEEEEecCCcEEEEEcCCCCC-CCCCcc-eEEEeCCCCCceEEEeeeC---CEEEEEe-CCe
Q psy16020 12 NKILDTALPPVHV---QGRVVCALADGSVAIFRRGPDGQ-WDLSKY-HTVTLGLPHHSVRSLAAVY---NKVWCGY-KNK 82 (151)
Q Consensus 12 i~l~~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~-wd~~~~-~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~ 82 (151)
+.-...|+++... +.++-||..||.|.+|+..++|- =+...| +.++.+. ..|.++-++. +-|..++ +-.
T Consensus 624 l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~--eKI~slRfHPLAadvLa~asyd~T 701 (1012)
T KOG1445|consen 624 LFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHG--EKITSLRFHPLAADVLAVASYDST 701 (1012)
T ss_pred cccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeeccc--ceEEEEEecchhhhHhhhhhccce
Confidence 3333456666553 45899999999999999986552 122233 4567766 8999998874 6677666 458
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~ 136 (151)
|.+||..+++...+|.+|++ +|+.++++++|- ..+...|+.|++|..++.+
T Consensus 702 i~lWDl~~~~~~~~l~gHtd---qIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 702 IELWDLANAKLYSRLVGHTD---QIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred eeeeehhhhhhhheeccCcC---ceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence 99999999999999999998 999999998887 7889999999999999743
No 90
>KOG3881|consensus
Probab=98.37 E-value=3.6e-06 Score=69.16 Aligned_cols=124 Identities=13% Similarity=0.131 Sum_probs=94.4
Q ss_pred ceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCC
Q psy16020 17 TALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPK 89 (151)
Q Consensus 17 ~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~ 89 (151)
=+++|.|.++ ++..++--|++.+|+...+. .+...+.+.. .||.|+... ++.+|+|.. +.+..||..
T Consensus 204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR----RPV~~fd~~E--~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r 277 (412)
T KOG3881|consen 204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR----RPVAQFDFLE--NPISSTGLTPSGNFIYTGNTKGQLAKFDLR 277 (412)
T ss_pred eeccceecCCCCCceEEEEecceeEEEecCcccC----cceeEecccc--CcceeeeecCCCcEEEEecccchhheeccc
Confidence 4567777665 45566777999999876433 2445667776 999999986 578999985 789999999
Q ss_pred CCcEEEE-EEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020 90 SLVVLKS-FDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK 149 (151)
Q Consensus 90 t~~i~~~-~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~~ 149 (151)
+++.... |.+-+- +|..+.+.+. .+..|++-|..||++|+.|-+++..+=+....+.
T Consensus 278 ~~kl~g~~~kg~tG---sirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~ 336 (412)
T KOG3881|consen 278 GGKLLGCGLKGITG---SIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTF 336 (412)
T ss_pred CceeeccccCCccC---CcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccE
Confidence 9998777 776654 6666666666 6799999999999999999777776655554444
No 91
>KOG0301|consensus
Probab=98.37 E-value=5.3e-06 Score=72.27 Aligned_cols=112 Identities=22% Similarity=0.332 Sum_probs=84.2
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEE--EEeCCeEEEEeCCCCc
Q psy16020 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVW--CGYKNKIHVVDPKSLV 92 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw--~g~~n~I~vid~~t~~ 92 (151)
.+|-..... ++....|.||-+|.+|.-+ ...+ .+..+..-||.+++.++.=+ |+.++.|..||. +++
T Consensus 141 asVWAv~~l~e~~~vTgsaDKtIklWk~~-------~~l~--tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge 210 (745)
T KOG0301|consen 141 ASVWAVASLPENTYVTGSADKTIKLWKGG-------TLLK--TFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGE 210 (745)
T ss_pred hheeeeeecCCCcEEeccCcceeeeccCC-------chhh--hhccchhheeeeEEecCCCeEeecCCceEEEEec-cCc
Confidence 345554443 4457788899999998532 1111 23335588999999976434 444568999988 899
Q ss_pred EEEEEEecCCCCCceeEEE-EeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 93 VLKSFDAHPRRESQVRQMT-WAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 93 i~~~~~~h~~~~~~I~~m~-~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+..+..+|++ .|.+|. ..++++.+|+++|+++|+|+.. ++.|.|.
T Consensus 211 ~l~~~~ghtn---~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~ 256 (745)
T KOG0301|consen 211 VLLEMHGHTN---FVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVIT 256 (745)
T ss_pred eeeeeeccce---EEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEe
Confidence 9999999986 788888 4478889999999999999998 8888884
No 92
>KOG0264|consensus
Probab=98.34 E-value=4.5e-06 Score=69.35 Aligned_cols=108 Identities=13% Similarity=0.218 Sum_probs=81.4
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCC-CCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC--CCcEEEEE
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWD-LSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK--SLVVLKSF 97 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd-~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~--t~~i~~~~ 97 (151)
++++..|..|++++.|+.++.+.=+ ...|+. ....+...|.-.++. ...|+++++ +++.+||++ +-+..+.-
T Consensus 190 ~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~-~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~ 268 (422)
T KOG0264|consen 190 EGTLLSGSDDHTICLWDINAESKEDKVVDPKT-IFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSV 268 (422)
T ss_pred ceeEeeccCCCcEEEEeccccccCCccccceE-EeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccc
Confidence 4579999999999999998644311 112222 222345788777775 466888874 689999999 67788888
Q ss_pred EecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccc
Q psy16020 98 DAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~ 136 (151)
.+|+. .|+|+.+. ++.++++++-|++|+|||.|...
T Consensus 269 ~ah~~---~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~ 306 (422)
T KOG0264|consen 269 KAHSA---EVNCVAFNPFNEFILATGSADKTVALWDLRNLN 306 (422)
T ss_pred cccCC---ceeEEEeCCCCCceEEeccCCCcEEEeechhcc
Confidence 89975 89999998 55778999999999999999643
No 93
>KOG0305|consensus
Probab=98.31 E-value=7.3e-06 Score=69.85 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=94.1
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCC-eEEEEeCCCC
Q psy16020 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN-KIHVVDPKSL 91 (151)
Q Consensus 15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n-~I~vid~~t~ 91 (151)
.+.|+++.+. ++.|-||..+|.|.+|+... ......+..+ +..-|-|++-.+..+=+|+++ .|..+|....
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~-----~k~~~~~~~~-h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~ 290 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKE-----QKKTRTLRGS-HASRVGSLAWNSSVLSSGSRDGKILNHDVRIS 290 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhh-----ccccccccCC-cCceeEEEeccCceEEEecCCCcEEEEEEecc
Confidence 5789999887 66899999999999998752 2233333332 347788888887888899974 8999999877
Q ss_pred cEEE-EEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 92 VVLK-SFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 92 ~i~~-~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+..- ++.+|. +.|.-|+++.++. +.|+++|+.+.+||..+.++++.+.
T Consensus 291 ~~~~~~~~~H~---qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~ 340 (484)
T KOG0305|consen 291 QHVVSTLQGHR---QEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFT 340 (484)
T ss_pred hhhhhhhhccc---ceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEe
Confidence 7433 488886 4899999998887 8999999999999998888877764
No 94
>KOG2695|consensus
Probab=98.30 E-value=3.2e-06 Score=68.87 Aligned_cols=124 Identities=14% Similarity=0.173 Sum_probs=96.1
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCC---CCCCCCcceEEEeCCCCCceEEEeeeC--CE-EEEEe-CCeEEE
Q psy16020 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPD---GQWDLSKYHTVTLGLPHHSVRSLAAVY--NK-VWCGY-KNKIHV 85 (151)
Q Consensus 15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~---~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~-Lw~g~-~n~I~v 85 (151)
++-|+++.|. ++-||.|+-||.|.+++.... ..| ....+.. .+.|+||.... ++ |-++. .++|..
T Consensus 252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~-----~a~rlyh-~Ssvtslq~Lq~s~q~LmaS~M~gkikL 325 (425)
T KOG2695|consen 252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGW-----CAQRLYH-DSSVTSLQILQFSQQKLMASDMTGKIKL 325 (425)
T ss_pred chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCc-----ceEEEEc-CcchhhhhhhccccceEeeccCcCceeE
Confidence 3456666664 478999999999999987532 234 2345543 38999998864 44 54444 589999
Q ss_pred EeCCCCcE---EEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 86 VDPKSLVV---LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 86 id~~t~~i---~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
||.+-.|. ..+.|+|.+...++-...--.+|+-+|.++|...|+|-.+++.++-+|.+.
T Consensus 326 yD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~ 387 (425)
T KOG2695|consen 326 YDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFP 387 (425)
T ss_pred eeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCC
Confidence 99988777 899999998777766666668899889999999999999999999988643
No 95
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.30 E-value=5.6e-05 Score=58.36 Aligned_cols=103 Identities=13% Similarity=0.221 Sum_probs=71.5
Q ss_pred EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CCeEEEEeCCCCcEEEEEEecCCCC
Q psy16020 29 VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRE 104 (151)
Q Consensus 29 ~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~ 104 (151)
+.+..||.|.+|+...+ +....+..+ ..++++.+.. +.+++++ .+.|++||..+++..+.+..+.+
T Consensus 5 ~s~~~d~~v~~~d~~t~-----~~~~~~~~~---~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-- 74 (300)
T TIGR03866 5 VSNEKDNTISVIDTATL-----EVTRTFPVG---QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-- 74 (300)
T ss_pred EEecCCCEEEEEECCCC-----ceEEEEECC---CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC--
Confidence 35566899999987421 222344433 3356777753 4577654 36899999999999888876542
Q ss_pred CceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 105 SQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 105 ~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
+..+.++++ .++++...++.|++||.++.+.+..++.
T Consensus 75 --~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~ 113 (300)
T TIGR03866 75 --PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV 113 (300)
T ss_pred --ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC
Confidence 345666644 4577778899999999999888887753
No 96
>KOG0295|consensus
Probab=98.29 E-value=4.5e-06 Score=68.19 Aligned_cols=125 Identities=21% Similarity=0.307 Sum_probs=93.3
Q ss_pred CCCceeeeEEeCCeEEEEec--CCcEEEEEcCCC----------------------------------CCCCCCcc-eEE
Q psy16020 14 ILDTALPPVHVQGRVVCALA--DGSVAIFRRGPD----------------------------------GQWDLSKY-HTV 56 (151)
Q Consensus 14 l~~~V~~i~~~~~~v~vgl~--nG~l~v~~~~~~----------------------------------~~wd~~~~-~~i 56 (151)
...+|..+.++++...++++ |++|.+|++..+ .-||++.. ..+
T Consensus 107 ~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ 186 (406)
T KOG0295|consen 107 HRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCI 186 (406)
T ss_pred cccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHH
Confidence 34689999999998777777 999999988631 13555442 111
Q ss_pred E-eCCCCCceEEEeee--CCEEE-EEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEe
Q psy16020 57 T-LGLPHHSVRSLAAV--YNKVW-CGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYN 131 (151)
Q Consensus 57 ~-l~~~~~pV~~m~~v--~~~Lw-~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd 131 (151)
+ +..+..-|.|..+. ++.+- |+.++.|+.|+..|+-++++|.+|+. -|..+...++|. ..|+++|.+|++|=
T Consensus 187 ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~e---wvr~v~v~~DGti~As~s~dqtl~vW~ 263 (406)
T KOG0295|consen 187 KSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSE---WVRMVRVNQDGTIIASCSNDQTLRVWV 263 (406)
T ss_pred HHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchH---hEEEEEecCCeeEEEecCCCceEEEEE
Confidence 1 12234667776664 56654 44468999999999999999999975 788888888887 88999999999999
Q ss_pred CCccceeeeE
Q psy16020 132 AHTYQHLQDV 141 (151)
Q Consensus 132 ~~t~~~l~~i 141 (151)
..+.++.+++
T Consensus 264 ~~t~~~k~~l 273 (406)
T KOG0295|consen 264 VATKQCKAEL 273 (406)
T ss_pred eccchhhhhh
Confidence 9998655544
No 97
>KOG4283|consensus
Probab=98.29 E-value=1.5e-05 Score=63.96 Aligned_cols=66 Identities=15% Similarity=0.294 Sum_probs=50.4
Q ss_pred EEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCcc-ceeeeEeC
Q psy16020 75 VWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTY-QHLQDVDI 143 (151)
Q Consensus 75 Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~-~~l~~idi 143 (151)
+.+|.++ +|..-|..+|..-+++.+|.+ .|-++.+++ +.|+.+++-|+.+|+||.+.. -+...+|-
T Consensus 161 iA~gtr~~~VrLCDi~SGs~sH~LsGHr~---~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~ 230 (397)
T KOG4283|consen 161 IAAGTRDVQVRLCDIASGSFSHTLSGHRD---GVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQ 230 (397)
T ss_pred EEEecCCCcEEEEeccCCcceeeeccccC---ceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeec
Confidence 4556644 788888888888888888876 788888874 577889999999999999974 55555553
No 98
>KOG0282|consensus
Probab=98.27 E-value=4.7e-06 Score=69.98 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=105.4
Q ss_pred CCCCceeeeeeCCCceeeeEEeC---CeEEEEecCCcEEEEEcCC-------------------------------CC--
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQ---GRVVCALADGSVAIFRRGP-------------------------------DG-- 46 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~-------------------------------~~-- 46 (151)
.-+.+|+.+.++...++|+.+++ |.+++|++||.|.-|+..+ ++
T Consensus 287 tETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~ 366 (503)
T KOG0282|consen 287 TETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSV 366 (503)
T ss_pred cccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccE
Confidence 34789999999999999999975 4599999999999998763 11
Q ss_pred -CCCCCcceEEEeC--CCCCceEEEeeeCCEEEEEe---CCeEEEEeCCC---CcEEEEEEecCCCCCceeEEEEeCCEE
Q psy16020 47 -QWDLSKYHTVTLG--LPHHSVRSLAAVYNKVWCGY---KNKIHVVDPKS---LVVLKSFDAHPRRESQVRQMTWAGDGV 117 (151)
Q Consensus 47 -~wd~~~~~~i~l~--~~~~pV~~m~~v~~~Lw~g~---~n~I~vid~~t---~~i~~~~~~h~~~~~~I~~m~~~~~~v 117 (151)
.|+.+.+-.++.- ......+||....+.=|.+| +|.|+++.+.- +.-++.|++|.-. ..-..+.++++|-
T Consensus 367 riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~va-Gys~~v~fSpDG~ 445 (503)
T KOG0282|consen 367 RIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVA-GYSCQVDFSPDGR 445 (503)
T ss_pred EEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceecc-CceeeEEEcCCCC
Confidence 3665555444332 23477889988876656666 58999998653 4577889999754 4455567887765
Q ss_pred -EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 118 -WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 118 -wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
++|++.|+.+.+||.+|.+++..+.
T Consensus 446 ~l~SGdsdG~v~~wdwkt~kl~~~lk 471 (503)
T KOG0282|consen 446 TLCSGDSDGKVNFWDWKTTKLVSKLK 471 (503)
T ss_pred eEEeecCCccEEEeechhhhhhhccc
Confidence 8999999999999999988887774
No 99
>KOG0272|consensus
Probab=98.26 E-value=6.3e-06 Score=68.36 Aligned_cols=117 Identities=18% Similarity=0.239 Sum_probs=86.5
Q ss_pred CCceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC-C-EEEEEe-CCeEEEEeCC
Q psy16020 15 LDTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY-N-KVWCGY-KNKIHVVDPK 89 (151)
Q Consensus 15 ~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~-~-~Lw~g~-~n~I~vid~~ 89 (151)
...|++|.|..+ .|.+..+.- -| +..||+.....+ -|..+-.||..+.+.. + +|..|+ +|.+.|||.+
T Consensus 303 s~~v~~iaf~~DGSL~~tGGlD---~~----~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR 375 (459)
T KOG0272|consen 303 SKGVFSIAFQPDGSLAATGGLD---SL----GRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR 375 (459)
T ss_pred ccccceeEecCCCceeeccCcc---ch----hheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeec
Confidence 358999988763 222222111 11 124777766544 5555669999999964 3 577776 4799999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeC-CE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAG-DG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~-~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
-.+...++.+|++ -|+.+.+++ .| -++|++.|+++++|-.+++++++.+
T Consensus 376 ~r~~ly~ipAH~n---lVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksL 426 (459)
T KOG0272|consen 376 MRSELYTIPAHSN---LVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSL 426 (459)
T ss_pred ccccceecccccc---hhhheEecccCCeEEEEcccCcceeeecCCCcccchhh
Confidence 9999999999997 788888884 34 3899999999999999999998765
No 100
>KOG0318|consensus
Probab=98.24 E-value=2.7e-05 Score=66.26 Aligned_cols=111 Identities=17% Similarity=0.171 Sum_probs=81.1
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE-EEEEe-C-CeEEEEeCCCCcE
Q psy16020 17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK-VWCGY-K-NKIHVVDPKSLVV 93 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~-Lw~g~-~-n~I~vid~~t~~i 93 (151)
+...+.-.++.+-||+.||.|-+|....+.. ..+...+ .+..||+++.+..+- ..++| . .+|.+||.++.+.
T Consensus 447 s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l----~ee~~~~-~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~ 521 (603)
T KOG0318|consen 447 SAVAVSPDGSEVAVGGQDGKVHVYSLSGDEL----KEEAKLL-EHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV 521 (603)
T ss_pred ceEEEcCCCCEEEEecccceEEEEEecCCcc----cceeeee-cccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce
Confidence 3333444466899999999999999874331 1122222 335999999998644 33333 3 4799999999997
Q ss_pred EEEEEe-cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcc
Q psy16020 94 LKSFDA-HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 94 ~~~~~~-h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~ 135 (151)
....-+ |+. .|++|+++++.. ..+++-|..|.+|....-
T Consensus 522 ~~~~w~FHta---kI~~~aWsP~n~~vATGSlDt~Viiysv~kP 562 (603)
T KOG0318|consen 522 KTNRWAFHTA---KINCVAWSPNNKLVATGSLDTNVIIYSVKKP 562 (603)
T ss_pred ecceeeeeee---eEEEEEeCCCceEEEeccccceEEEEEccCh
Confidence 555444 874 999999998877 888999999999999863
No 101
>KOG0278|consensus
Probab=98.24 E-value=4.4e-06 Score=65.69 Aligned_cols=129 Identities=11% Similarity=0.153 Sum_probs=96.4
Q ss_pred ceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE-EEEEe-CC
Q psy16020 7 TPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWCGY-KN 81 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~-Lw~g~-~n 81 (151)
..|+++..+--|-...+.+ +++..|..+-.|.||+.+.-. .+ ..+++.+...||..+.. +++ +--+. +.
T Consensus 92 delhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~----Ap--p~E~~ghtg~Ir~v~wc~eD~~iLSSadd~ 165 (334)
T KOG0278|consen 92 DELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK----AP--PKEISGHTGGIRTVLWCHEDKCILSSADDK 165 (334)
T ss_pred hhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCC----CC--chhhcCCCCcceeEEEeccCceEEeeccCC
Confidence 3455555555555555543 468888888889999775211 12 23555556899998885 444 44333 46
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
.|+.||..|++..++++-. ++|+.|.++.+|=.++....+.|+.||+.++++++..+.--
T Consensus 166 tVRLWD~rTgt~v~sL~~~----s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~ 225 (334)
T KOG0278|consen 166 TVRLWDHRTGTEVQSLEFN----SPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPC 225 (334)
T ss_pred ceEEEEeccCcEEEEEecC----CCCcceeeccCCCEEEEecCceeEEeccccccceeeccCcc
Confidence 8999999999999999954 48999999999999999999999999999999999987543
No 102
>KOG0641|consensus
Probab=98.19 E-value=0.00013 Score=56.92 Aligned_cols=123 Identities=12% Similarity=0.187 Sum_probs=89.7
Q ss_pred CCceeeeEEeC-CeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-----CEEEEEe--C-CeEE
Q psy16020 15 LDTALPPVHVQ-GRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-----NKVWCGY--K-NKIH 84 (151)
Q Consensus 15 ~~~V~~i~~~~-~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-----~~Lw~g~--~-n~I~ 84 (151)
+.+|+|....+ +++++-.+| -+|.+...+++.. +. ....+++.-+...||-|++.+ +.+-++. | ++||
T Consensus 89 kgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~-~~-~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy 166 (350)
T KOG0641|consen 89 KGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTC-NA-TGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIY 166 (350)
T ss_pred CccEEEEEecCccCeEEecCCCceEEEEecccccc-cc-cCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEE
Confidence 36888888764 345544444 5688877765433 21 223345554459999999974 5555544 3 5999
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+-|..+++-.+-+.+|+. .|..+-.=....++|++.|-+||+||.+--.++..+|
T Consensus 167 ~tdc~~g~~~~a~sghtg---hilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~ 221 (350)
T KOG0641|consen 167 ITDCGRGQGFHALSGHTG---HILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLD 221 (350)
T ss_pred EeecCCCCcceeecCCcc---cEEEEEEecCcEEEccCCCceEEEEeeeccceeeecc
Confidence 999999999999999985 7888766677779999999999999999777777665
No 103
>KOG0264|consensus
Probab=98.19 E-value=1.7e-05 Score=65.96 Aligned_cols=100 Identities=20% Similarity=0.284 Sum_probs=76.2
Q ss_pred eEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-CCeEEEEeCCCCc-EEEEEEec
Q psy16020 27 RVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-KNKIHVVDPKSLV-VLKSFDAH 100 (151)
Q Consensus 27 ~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid~~t~~-i~~~~~~h 100 (151)
.+|.+-+| |.|.+++... |..+..+.++-.+ .+|.|+.+.. .-|..|+ +++|.+||++++. ...+|++|
T Consensus 241 ~lF~sv~dd~~L~iwD~R~---~~~~~~~~~~ah~--~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H 315 (422)
T KOG0264|consen 241 DLFGSVGDDGKLMIWDTRS---NTSKPSHSVKAHS--AEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGH 315 (422)
T ss_pred hhheeecCCCeEEEEEcCC---CCCCCcccccccC--CceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCC
Confidence 57766655 6788888753 3222333334434 9999999973 3466665 5789999999877 88999999
Q ss_pred CCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc
Q psy16020 101 PRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 101 ~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t 134 (151)
.+ .|.++.+++ +.|+.|.+.|+.+.+||...
T Consensus 316 ~d---ev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 316 ED---EVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred Cc---ceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 87 899999995 48899999999999999986
No 104
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.17 E-value=0.00058 Score=51.75 Aligned_cols=134 Identities=19% Similarity=0.166 Sum_probs=87.2
Q ss_pred CCCCceeeeeeCCCceeee-EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCC---ceEEEeeeCCEEEE
Q psy16020 3 YPHPTPYPLNKILDTALPP-VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHH---SVRSLAAVYNKVWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i-~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~---pV~~m~~v~~~Lw~ 77 (151)
..+.+.+|+..+++.+..- ...++++|++..+|.|..|+... |. ....+.... +.. +.....+.++.+++
T Consensus 53 ~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~t-G~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (238)
T PF13360_consen 53 AKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSDGSLYALDAKT-GK----VLWSIYLTSSPPAGVRSSSSPAVDGDRLYV 127 (238)
T ss_dssp TTTSEEEEEEECSSCGGSGEEEETTEEEEEETTSEEEEEETTT-SC----EEEEEEE-SSCTCSTB--SEEEEETTEEEE
T ss_pred CCCCCEEEEeeccccccceeeecccccccccceeeeEecccCC-cc----eeeeeccccccccccccccCceEecCEEEE
Confidence 4578899999998765544 77889999999999999998532 31 122221111 111 22334445899999
Q ss_pred Ee-CCeEEEEeCCCCcEEEEEEecCCCC-Cce-------eEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 78 GY-KNKIHVVDPKSLVVLKSFDAHPRRE-SQV-------RQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 78 g~-~n~I~vid~~t~~i~~~~~~h~~~~-~~I-------~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
++ ++.|+.+|++||++.-....+.... ..+ ..+...++.++++......+.+ |.++.+.+.+.+
T Consensus 128 ~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~-d~~tg~~~w~~~ 200 (238)
T PF13360_consen 128 GTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDGRVVAV-DLATGEKLWSKP 200 (238)
T ss_dssp EETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTSSEEEE-ETTTTEEEEEEC
T ss_pred EeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCCeEEEE-ECCCCCEEEEec
Confidence 99 6799999999999988888754321 111 3444445555655444446777 999998666544
No 105
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.17 E-value=0.00037 Score=57.76 Aligned_cols=138 Identities=13% Similarity=0.133 Sum_probs=88.4
Q ss_pred CCCCCceeeeeeCCCcee-eeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEE
Q psy16020 2 EYPHPTPYPLNKILDTAL-PPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVW 76 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~~V~-~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw 76 (151)
+..+.+.+..|.....+. .+.+.+ .++|++..||.|.+++.. +.+....++.|. .| +++++. ++.++
T Consensus 22 D~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~-----~~~~v~~i~~G~--~~-~~i~~s~DG~~~~ 93 (369)
T PF02239_consen 22 DGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLA-----TGKVVATIKVGG--NP-RGIAVSPDGKYVY 93 (369)
T ss_dssp ETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETT-----SSSEEEEEE-SS--EE-EEEEE--TTTEEE
T ss_pred ECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECC-----cccEEEEEecCC--Cc-ceEEEcCCCCEEE
Confidence 345678899998775543 345554 579999999999999975 334556788886 55 667775 46799
Q ss_pred EEe--CCeEEEEeCCCCcEEEEEEecCC----CCCceeEEEEeCC-EEE-EEEcCCCeEEEEeCCcccee--eeEeCCcc
Q psy16020 77 CGY--KNKIHVVDPKSLVVLKSFDAHPR----RESQVRQMTWAGD-GVW-VSIRLDSTLRMYNAHTYQHL--QDVDIEPY 146 (151)
Q Consensus 77 ~g~--~n~I~vid~~t~~i~~~~~~h~~----~~~~I~~m~~~~~-~vw-is~~~d~~l~lwd~~t~~~l--~~idi~~~ 146 (151)
+++ .+.+.|+|++|++..+++..... .++.+..+..+.. .-| ++..+.+.|-+-|....+.+ ..++++.+
T Consensus 94 v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~ 173 (369)
T PF02239_consen 94 VANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRF 173 (369)
T ss_dssp EEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TT
T ss_pred EEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccccc
Confidence 998 48999999999999999886532 2346777766633 324 57788899988887765543 45655444
Q ss_pred c
Q psy16020 147 V 147 (151)
Q Consensus 147 v 147 (151)
.
T Consensus 174 ~ 174 (369)
T PF02239_consen 174 P 174 (369)
T ss_dssp E
T ss_pred c
Confidence 3
No 106
>KOG0293|consensus
Probab=98.17 E-value=9.8e-06 Score=67.36 Aligned_cols=114 Identities=17% Similarity=0.171 Sum_probs=79.7
Q ss_pred eeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE------EeCCCCCceEEEeeeCC--EEEEE
Q psy16020 9 YPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV------TLGLPHHSVRSLAAVYN--KVWCG 78 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i------~l~~~~~pV~~m~~v~~--~Lw~g 78 (151)
..-+...++|+++.-.+ ..+.+.|++-.+-.|+.. +.+.+ +.|. .-||+.---.+ -+.-|
T Consensus 389 r~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~--------e~~lv~kY~Ghkq~~--fiIrSCFgg~~~~fiaSG 458 (519)
T KOG0293|consen 389 RGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLE--------ENKLVRKYFGHKQGH--FIIRSCFGGGNDKFIASG 458 (519)
T ss_pred hccccccCceeEEEEcCCCcEEEEEcccCeeEEeecc--------hhhHHHHhhcccccc--eEEEeccCCCCcceEEec
Confidence 33455567777776654 357788888777777654 32222 2222 44555443333 35555
Q ss_pred eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE--EEEEcCCCeEEEEeCCcc
Q psy16020 79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV--WVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v--wis~~~d~~l~lwd~~t~ 135 (151)
+. ++||||+..+++....+.+|+. .|+|+.+.+..- +.|+++|++||+|-....
T Consensus 459 SED~kvyIWhr~sgkll~~LsGHs~---~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 459 SEDSKVYIWHRISGKLLAVLSGHSK---TVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred CCCceEEEEEccCCceeEeecCCcc---eeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 54 6999999999999999999985 899999986654 899999999999987643
No 107
>KOG1445|consensus
Probab=98.14 E-value=1.5e-05 Score=69.49 Aligned_cols=129 Identities=15% Similarity=0.184 Sum_probs=100.4
Q ss_pred eeeeeCC-CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeCC
Q psy16020 9 YPLNKIL-DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKN 81 (151)
Q Consensus 9 l~~i~l~-~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~n 81 (151)
+.-+.-+ |.|.++.|. ++-+-.+..|-.+.+|....+..-.++.|. +.+|.-+-+|-|+-++ ++-|+.|.++
T Consensus 72 i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape-~~~g~~~~~vE~l~fHpTaDgil~s~a~g 150 (1012)
T KOG1445|consen 72 IGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPE-IDVGGGNVIVECLRFHPTADGILASGAHG 150 (1012)
T ss_pred cceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcc-eeecCCceEEEEeecccCcCceEEeccCc
Confidence 3444333 789998774 445667788889999998755444554443 4566556899999997 5789999999
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT-YQHLQDV 141 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t-~~~l~~i 141 (151)
.+|++|+.|.+..-++.+|++ .|..+.++.+|- +.+...|-.|++||.++ .+++|..
T Consensus 151 ~v~i~D~stqk~~~el~~h~d---~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~t 209 (1012)
T KOG1445|consen 151 SVYITDISTQKTAVELSGHTD---KVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTT 209 (1012)
T ss_pred eEEEEEcccCceeecccCCch---hhhccccccCCceEeeecCCcceEEeCCccCCCccccc
Confidence 999999999999999999998 999999998876 55567799999999996 6666654
No 108
>KOG0283|consensus
Probab=98.14 E-value=8.1e-05 Score=65.73 Aligned_cols=131 Identities=10% Similarity=0.087 Sum_probs=100.6
Q ss_pred CCCCceeeeeeCCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~ 77 (151)
....+||.-...+|-|+|+.+++ ++..-|.-||.+.+|+.. ..+.+.-.+.+.-|+++.+.. .-.-+
T Consensus 397 ~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~--------d~~Vv~W~Dl~~lITAvcy~PdGk~avI 468 (712)
T KOG0283|consen 397 PGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSIS--------DKKVVDWNDLRDLITAVCYSPDGKGAVI 468 (712)
T ss_pred CCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEeecC--------cCeeEeehhhhhhheeEEeccCCceEEE
Confidence 35678999999999999999974 578888899999999874 223333344457788888863 34667
Q ss_pred Ee-CCeEEEEeCCCCcEEEEEEecCCC-----CCceeEEEEeCCEE--EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 78 GY-KNKIHVVDPKSLVVLKSFDAHPRR-----ESQVRQMTWAGDGV--WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 78 g~-~n~I~vid~~t~~i~~~~~~h~~~-----~~~I~~m~~~~~~v--wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|+ .+..++++++.++.+..++.+... ...|+.+.+.+... .+-.++|+.||+||.++.+++.++
T Consensus 469 Gt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~Kf 540 (712)
T KOG0283|consen 469 GTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKF 540 (712)
T ss_pred EEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhh
Confidence 77 678999999999999999876321 23699988884433 668899999999999877766655
No 109
>KOG0772|consensus
Probab=98.13 E-value=1.1e-05 Score=68.61 Aligned_cols=106 Identities=21% Similarity=0.274 Sum_probs=74.6
Q ss_pred CeEEEEecCCcEEEEEcCCCCCCCCCcceEEE---eCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEE---
Q psy16020 26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT---LGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKS--- 96 (151)
Q Consensus 26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~---l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~--- 96 (151)
+....+.-||+|.+|+.+... +..+.|+ -+...-|++..++.. +.+.+||. +.|.+||..+..+--.
T Consensus 282 ~~FlT~s~DgtlRiWdv~~~k----~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~v 357 (641)
T KOG0772|consen 282 EEFLTCSYDGTLRIWDVNNTK----SQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKV 357 (641)
T ss_pred cceEEecCCCcEEEEecCCch----hheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEe
Confidence 346666679999999876321 1223333 233347888888873 44778886 6999999876554333
Q ss_pred EEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020 97 FDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 97 ~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~ 136 (151)
-.+|. ..+.|+++.++.+|- ++|.+.|.+|++||.+.++
T Consensus 358 k~AH~-~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 358 KDAHL-PGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred eeccC-CCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence 44675 356899999997765 8999999999999999744
No 110
>KOG0267|consensus
Probab=98.12 E-value=7.7e-06 Score=71.69 Aligned_cols=131 Identities=15% Similarity=0.176 Sum_probs=93.2
Q ss_pred eeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCC----------------------------------CCCCCCCcc
Q psy16020 11 LNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGP----------------------------------DGQWDLSKY 53 (151)
Q Consensus 11 ~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~----------------------------------~~~wd~~~~ 53 (151)
++... .+|-||.+... -|-+|.++|+|.+|+... -+.||....
T Consensus 65 S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~ 144 (825)
T KOG0267|consen 65 SLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKK 144 (825)
T ss_pred eeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhcc
Confidence 44444 46667766433 466778889999998752 123554422
Q ss_pred eEEE-eCCCCCceEEEeeeCCEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEE
Q psy16020 54 HTVT-LGLPHHSVRSLAAVYNKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLR 128 (151)
Q Consensus 54 ~~i~-l~~~~~pV~~m~~v~~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~ 128 (151)
.... .+.+..-|+++.+..+-=|.+.| +.+.+||..-|++.++|+.|+- +|+.+...+..+ ..+++.|.+++
T Consensus 145 Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~---~v~sle~hp~e~Lla~Gs~d~tv~ 221 (825)
T KOG0267|consen 145 GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEG---KVQSLEFHPLEVLLAPGSSDRTVR 221 (825)
T ss_pred CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccc---cccccccCchhhhhccCCCCceee
Confidence 2222 22233668888887655465553 6799999999999999999974 888888877777 77889999999
Q ss_pred EEeCCccceeeeEeCC
Q psy16020 129 MYNAHTYQHLQDVDIE 144 (151)
Q Consensus 129 lwd~~t~~~l~~idi~ 144 (151)
+||.+|++.+...+-+
T Consensus 222 f~dletfe~I~s~~~~ 237 (825)
T KOG0267|consen 222 FWDLETFEVISSGKPE 237 (825)
T ss_pred eeccceeEEeeccCCc
Confidence 9999999998777543
No 111
>KOG2106|consensus
Probab=98.11 E-value=8.8e-05 Score=63.10 Aligned_cols=129 Identities=12% Similarity=0.136 Sum_probs=97.2
Q ss_pred eeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-CCe
Q psy16020 8 PYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-KNK 82 (151)
Q Consensus 8 ~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~n~ 82 (151)
.+..++-. +.|+.-.+++ ..+.+..+.|.+..|.+..++.- +.+..++-.+ ++-|.||.+.+ +.+-.|- ++.
T Consensus 192 ~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~--k~~~~fek~e-kk~Vl~v~F~engdviTgDS~G~ 268 (626)
T KOG2106|consen 192 KLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLV--KRQGIFEKRE-KKFVLCVTFLENGDVITGDSGGN 268 (626)
T ss_pred ccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceE--EEeecccccc-ceEEEEEEEcCCCCEEeecCCce
Confidence 34455533 5666666664 36889999999999988643310 1112222222 47899999975 5677775 679
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
|+||+..+-++.++..+|. ..|.++...++|-++|+++|..|.+|| ..++.++++.+
T Consensus 269 i~Iw~~~~~~~~k~~~aH~---ggv~~L~~lr~GtllSGgKDRki~~Wd-~~y~k~r~~el 325 (626)
T KOG2106|consen 269 ILIWSKGTNRISKQVHAHD---GGVFSLCMLRDGTLLSGGKDRKIILWD-DNYRKLRETEL 325 (626)
T ss_pred EEEEeCCCceEEeEeeecC---CceEEEEEecCccEeecCccceEEecc-ccccccccccC
Confidence 9999999999999888996 489999999999999999999999999 66888888864
No 112
>KOG0268|consensus
Probab=98.11 E-value=2.9e-05 Score=63.69 Aligned_cols=132 Identities=13% Similarity=0.091 Sum_probs=99.4
Q ss_pred CCCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK 80 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~ 80 (151)
.+...|++.++-. ..|..|.+..+..|....|-+|..|... | +|...=+|. ..+.-+.... +.+++.||
T Consensus 96 lsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~--~-----~p~~tilg~--s~~~gIdh~~~~~~FaTcG 166 (433)
T KOG0268|consen 96 LSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKID--G-----PPLHTILGK--SVYLGIDHHRKNSVFATCG 166 (433)
T ss_pred hhhhhhhheeecccCceeeEEecccceEEecCCcceeeeecc--C-----Ccceeeecc--ccccccccccccccccccC
Confidence 3556778888877 4888888887777777767788887653 2 122323343 4444444443 66899999
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
-+|.|||..-...+++++-..| .|.++.+. ...++.+++.|..|.|||.++.++++++-+.-.
T Consensus 167 e~i~IWD~~R~~Pv~smswG~D---ti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mR 231 (433)
T KOG0268|consen 167 EQIDIWDEQRDNPVSSMSWGAD---SISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMR 231 (433)
T ss_pred ceeeecccccCCccceeecCCC---ceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeecc
Confidence 9999999998889999987766 78888887 457799999999999999999999998865443
No 113
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.11 E-value=0.00019 Score=58.75 Aligned_cols=132 Identities=11% Similarity=-0.024 Sum_probs=87.6
Q ss_pred CCCCceeeeeeCCCce-eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC
Q psy16020 3 YPHPTPYPLNKILDTA-LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK 80 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V-~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~ 80 (151)
..+.+.+|+.++++.+ -.....++++|++..+|.|..|+...+. .|... ++. .......+.++.++++++
T Consensus 82 ~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~------~~~--~~~~~p~v~~~~v~v~~~ 153 (377)
T TIGR03300 82 AETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAK------LSS--EVLSPPLVANGLVVVRTN 153 (377)
T ss_pred ccCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeec------cCc--eeecCCEEECCEEEEECC
Confidence 4577899999998643 3455678899999999999999974322 46433 222 111122335788999885
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCC--CceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRE--SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~--~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
+.|+.+|+++++..-+++...... .........++ ..+....++.+..+|.++++.+.+.++
T Consensus 154 ~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~-~v~~~~~~g~v~ald~~tG~~~W~~~~ 218 (377)
T TIGR03300 154 DGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADG-GVLVGFAGGKLVALDLQTGQPLWEQRV 218 (377)
T ss_pred CCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECC-EEEEECCCCEEEEEEccCCCEeeeecc
Confidence 689999999999877766443210 00112233344 445677788999999999988766543
No 114
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.10 E-value=0.00025 Score=58.84 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=74.2
Q ss_pred CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEE-Eeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020 26 GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRS-LAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 26 ~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~-m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h 100 (151)
|..||.. .+|+|+|++-. ..+....++.+. .+ .. +.+. +..+|+++. +.|.+||+.++++.+++.+.
T Consensus 6 ~l~~V~~~~~~~v~viD~~-----t~~~~~~i~~~~--~~-h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G 77 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGA-----TNKVVARIPTGG--AP-HAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG 77 (369)
T ss_dssp GEEEEEEGGGTEEEEEETT-----T-SEEEEEE-ST--TE-EEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S
T ss_pred cEEEEEecCCCEEEEEECC-----CCeEEEEEcCCC--Cc-eeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC
Confidence 3455655 47999999864 223445677664 44 33 3333 367999885 69999999999999999976
Q ss_pred CCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 101 PRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 101 ~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
. ....++.+ |..++++...++.+.++|++|+|+++.|...
T Consensus 78 ~----~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~ 119 (369)
T PF02239_consen 78 G----NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTG 119 (369)
T ss_dssp S----EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--
T ss_pred C----CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccc
Confidence 4 45667776 4557788888999999999999999999754
No 115
>KOG2445|consensus
Probab=98.09 E-value=0.00011 Score=59.23 Aligned_cols=142 Identities=17% Similarity=0.221 Sum_probs=99.5
Q ss_pred CCCCCCceeeeee--------CCCceeeeEEeCC----eEEEEecCC------cEEEEEcCCCC-CCCCCcceEEEeCCC
Q psy16020 1 MEYPHPTPYPLNK--------ILDTALPPVHVQG----RVVCALADG------SVAIFRRGPDG-QWDLSKYHTVTLGLP 61 (151)
Q Consensus 1 ~~~~~~~~l~~i~--------l~~~V~~i~~~~~----~v~vgl~nG------~l~v~~~~~~~-~wd~~~~~~i~l~~~ 61 (151)
||.+.++..++|+ -..+-+|+...+. ..++-.+|- .+.+|++++++ .|- +.-+|.+.
T Consensus 147 ~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~----kva~L~d~ 222 (361)
T KOG2445|consen 147 MNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWL----KVAELPDH 222 (361)
T ss_pred cccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceee----eehhcCCC
Confidence 5667788888887 4457788877644 355555565 89999998777 452 22245566
Q ss_pred CCceEEEeeeC------CEEEEEeCCeEEEEeCCC------------------CcEE--EEEEecCCCCCceeEEEEeCC
Q psy16020 62 HHSVRSLAAVY------NKVWCGYKNKIHVVDPKS------------------LVVL--KSFDAHPRRESQVRQMTWAGD 115 (151)
Q Consensus 62 ~~pV~~m~~v~------~~Lw~g~~n~I~vid~~t------------------~~i~--~~~~~h~~~~~~I~~m~~~~~ 115 (151)
..||+.+.... -.|.+||++-|+||+.+. ++++ ..|..|. .+|=.|.+.-.
T Consensus 223 ~dpI~di~wAPn~Gr~y~~lAvA~kDgv~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~---~~VWrv~wNmt 299 (361)
T KOG2445|consen 223 TDPIRDISWAPNIGRSYHLLAVATKDGVRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHN---GEVWRVRWNMT 299 (361)
T ss_pred CCcceeeeeccccCCceeeEEEeecCcEEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCC---CceEEEEEeee
Confidence 79999999963 248899976688888763 2222 2344443 47888877733
Q ss_pred -EEEEEEcCCCeEEEEeCC---ccceeeeEeCCccccc
Q psy16020 116 -GVWVSIRLDSTLRMYNAH---TYQHLQDVDIEPYVSK 149 (151)
Q Consensus 116 -~vwis~~~d~~l~lwd~~---t~~~l~~idi~~~v~~ 149 (151)
.++.|.+.||.||||.+. .++++..+..++++.|
T Consensus 300 GtiLsStGdDG~VRLWkany~n~~kC~sv~~~e~~~~~ 337 (361)
T KOG2445|consen 300 GTILSSTGDDGCVRLWKANYNNLWKCTSVLKAEGSVTK 337 (361)
T ss_pred eeEEeecCCCceeeehhhhhhhhheeeeEEeccCCCCC
Confidence 458999999999999986 4677777877777654
No 116
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.08 E-value=0.0002 Score=59.25 Aligned_cols=137 Identities=12% Similarity=0.059 Sum_probs=89.8
Q ss_pred CCCceeeeeeCCCcee------eeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCC--Cce-EEEeeeCC
Q psy16020 4 PHPTPYPLNKILDTAL------PPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HSV-RSLAAVYN 73 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~------~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~--~pV-~~m~~v~~ 73 (151)
..++.+|+.++.+.+- .-...+++||++..+|.|..|+...+. .|..+....-...... ..+ ...+..++
T Consensus 42 ~~~~~~W~~~~g~g~~~~~~~~sPvv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 121 (394)
T PRK11138 42 FTPTTVWSTSVGDGVGDYYSRLHPAVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGG 121 (394)
T ss_pred CCcceeeEEEcCCCCccceeeeccEEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECC
Confidence 3567788988876542 345578999999999999999975432 4755433211110000 011 12455689
Q ss_pred EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 74 KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 74 ~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+|++++. +.++.+|++|+++.=+...... ....-...++.|+ ....++.|..+|.+|++.+-..+..
T Consensus 122 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~~---~~ssP~v~~~~v~-v~~~~g~l~ald~~tG~~~W~~~~~ 189 (394)
T PRK11138 122 KVYIGSEKGQVYALNAEDGEVAWQTKVAGE---ALSRPVVSDGLVL-VHTSNGMLQALNESDGAVKWTVNLD 189 (394)
T ss_pred EEEEEcCCCEEEEEECCCCCCcccccCCCc---eecCCEEECCEEE-EECCCCEEEEEEccCCCEeeeecCC
Confidence 9999986 5899999999998776664421 1111122344444 5667889999999999999887653
No 117
>KOG0269|consensus
Probab=98.06 E-value=3e-05 Score=68.46 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=92.6
Q ss_pred ceeeeEE---eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeC-CeEEEEeCC
Q psy16020 17 TALPPVH---VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYK-NKIHVVDPK 89 (151)
Q Consensus 17 ~V~~i~~---~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~-n~I~vid~~ 89 (151)
+|.++.+ .++.|..|..||+|-.|+...+.. ... --+. .++||-+.+. +++...+.+ +.+..||++
T Consensus 135 s~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S-----~~t-~~~n-SESiRDV~fsp~~~~~F~s~~dsG~lqlWDlR 207 (839)
T KOG0269|consen 135 SANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS-----KST-FRSN-SESIRDVKFSPGYGNKFASIHDSGYLQLWDLR 207 (839)
T ss_pred ceeeeeeccCCccEEEecCCCceEEEEeeecccc-----ccc-cccc-chhhhceeeccCCCceEEEecCCceEEEeecc
Confidence 6667766 467899999999999998864321 111 1122 2888888886 366777776 589999987
Q ss_pred -CCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeCCc--cceeeeEeCCccccc
Q psy16020 90 -SLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHT--YQHLQDVDIEPYVSK 149 (151)
Q Consensus 90 -t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~~t--~~~l~~idi~~~v~~ 149 (151)
.-+.++.|.||. ++|.|+.+.+++.| .+++||..+++||..+ ..++..|+.-.+|.+
T Consensus 208 qp~r~~~k~~AH~---GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~r 268 (839)
T KOG0269|consen 208 QPDRCEKKLTAHN---GPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGR 268 (839)
T ss_pred CchhHHHHhhccc---CceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeee
Confidence 677999999997 49999999999886 5788999999999985 555666665555554
No 118
>KOG0288|consensus
Probab=98.05 E-value=0.00013 Score=60.72 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=97.3
Q ss_pred CCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEE-cCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEE-EEeC
Q psy16020 5 HPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFR-RGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVW-CGYK 80 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~-~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw-~g~~ 80 (151)
...|.+++-..+.+++|+..+--++-|--|++|..|+ |.+ +....+++| .-|+++.+.- .+|- ++-+
T Consensus 292 k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~------~~~~sv~~g---g~vtSl~ls~~g~~lLsssRD 362 (459)
T KOG0288|consen 292 KAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSA------DKTRSVPLG---GRVTSLDLSMDGLELLSSSRD 362 (459)
T ss_pred hhheeccccccccccceEecceeeeecccccceEEEeccCC------ceeeEeecC---cceeeEeeccCCeEEeeecCC
Confidence 3456777766689999998877889999999999998 432 223455665 5888988863 3443 4446
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCC-ceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRES-QVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~-~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
|.+.+||..+.++..+|.+-..... -.+..++++++- ..+++-|+.|++|++.|.++-..+.
T Consensus 363 dtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~ 426 (459)
T KOG0288|consen 363 DTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLS 426 (459)
T ss_pred CceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEec
Confidence 8999999999999999987643322 388888887766 5678889999999999988776654
No 119
>KOG2055|consensus
Probab=98.04 E-value=6.3e-05 Score=63.19 Aligned_cols=126 Identities=15% Similarity=0.147 Sum_probs=92.9
Q ss_pred CceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C-EEEEEeCC-eEEEEeCC
Q psy16020 16 DTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N-KVWCGYKN-KIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~-~Lw~g~~n-~I~vid~~ 89 (151)
..|.++.++++. +.+|.-||++.+|..+ |.-+. ..+.+.+.. .||.|..+.. . .+..+... -.|+||.+
T Consensus 214 ~~I~sv~FHp~~plllvaG~d~~lrifqvD--Gk~N~-~lqS~~l~~--fPi~~a~f~p~G~~~i~~s~rrky~ysyDle 288 (514)
T KOG2055|consen 214 GGITSVQFHPTAPLLLVAGLDGTLRIFQVD--GKVNP-KLQSIHLEK--FPIQKAEFAPNGHSVIFTSGRRKYLYSYDLE 288 (514)
T ss_pred CCceEEEecCCCceEEEecCCCcEEEEEec--CccCh-hheeeeecc--CccceeeecCCCceEEEecccceEEEEeecc
Confidence 479999999875 8888889999999975 43222 234556665 9999999973 3 35555444 59999999
Q ss_pred CCcEEEE--EEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020 90 SLVVLKS--FDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 148 (151)
Q Consensus 90 t~~i~~~--~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~ 148 (151)
+.++.+- ..+++ ...+...+++.++- .+..++.+.|.|-|+.|.+++..+-++-.|+
T Consensus 289 ~ak~~k~~~~~g~e--~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~ 348 (514)
T KOG2055|consen 289 TAKVTKLKPPYGVE--EKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVS 348 (514)
T ss_pred ccccccccCCCCcc--cchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEe
Confidence 9987654 33443 45677777775544 5567889999999999999999998776654
No 120
>KOG0283|consensus
Probab=98.03 E-value=0.0001 Score=65.09 Aligned_cols=117 Identities=15% Similarity=0.186 Sum_probs=87.8
Q ss_pred eCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcc--eEEEeCCC----CCceEEEeee---CCEEEEEe-C
Q psy16020 13 KILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKY--HTVTLGLP----HHSVRSLAAV---YNKVWCGY-K 80 (151)
Q Consensus 13 ~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~--~~i~l~~~----~~pV~~m~~v---~~~Lw~g~-~ 80 (151)
-|++-|++++|.+ +.++||.=+|...+|+.. +++.. ..|.+... ...|+.+.+. .++|-+.+ +
T Consensus 449 Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~-----~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnD 523 (712)
T KOG0283|consen 449 DLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTE-----GLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSND 523 (712)
T ss_pred hhhhhheeEEeccCCceEEEEEeccEEEEEEcc-----CCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCC
Confidence 4678999999975 479999999999999865 22222 23344321 1468888886 26677666 5
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~ 135 (151)
.+|.|||.++.+++..|.++.+..+++.+=-.. +|- .+++++|..|++|+....
T Consensus 524 SrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~-Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 524 SRIRIYDGRDKDLVHKFKGFRNTSSQISASFSS-DGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred CceEEEeccchhhhhhhcccccCCcceeeeEcc-CCCEEEEeecCceEEEEeCCCC
Confidence 799999999999999999988888888774443 444 779999999999997543
No 121
>KOG1539|consensus
Probab=98.03 E-value=0.00045 Score=61.69 Aligned_cols=123 Identities=13% Similarity=0.201 Sum_probs=94.7
Q ss_pred eeeeeCCCc-eeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020 9 YPLNKILDT-ALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY--NKVWCGYK- 80 (151)
Q Consensus 9 l~~i~l~~~-V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~--~~Lw~g~~- 80 (151)
+.-.+.... |.+|.|- =|++.+|...|.+.+|.... -+.+ +.......|+++.... |-+.+|+.
T Consensus 152 ~~~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt--------~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~ 223 (910)
T KOG1539|consen 152 STFLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRT--------GKVVYTFQEFFSRITAIEQSPALDVVAIGLEN 223 (910)
T ss_pred ceeeeccCCceeeEecchhheeeEEEeecCCcEEEEEecc--------CcEEEEecccccceeEeccCCcceEEEEeccC
Confidence 334445533 8888874 36899999999999997753 2222 3333348888888865 88999997
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
++|.++|.+..++..+|+ |.. .+|+.+.+. |..+..+++..|.+-+||.+..++...+.
T Consensus 224 G~ViifNlK~dkil~sFk-~d~--g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~ 284 (910)
T KOG1539|consen 224 GTVIIFNLKFDKILMSFK-QDW--GRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTR 284 (910)
T ss_pred ceEEEEEcccCcEEEEEE-ccc--cceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeee
Confidence 599999999999999999 532 599999998 77778888888999999999766665554
No 122
>KOG0640|consensus
Probab=98.02 E-value=7.3e-05 Score=60.49 Aligned_cols=117 Identities=13% Similarity=0.187 Sum_probs=92.0
Q ss_pred CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeC---CCCCceEEEeeeC-CEEEEE-e-CCeEEEE
Q psy16020 16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLG---LPHHSVRSLAAVY-NKVWCG-Y-KNKIHVV 86 (151)
Q Consensus 16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~---~~~~pV~~m~~v~-~~Lw~g-~-~n~I~vi 86 (151)
.+|.+|.+++ .++.+|..--++.+|+.+. .+.+ .-. .+...|+++-+.. +.||+. + ++.|.+|
T Consensus 217 ~~vrsiSfHPsGefllvgTdHp~~rlYdv~T--------~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Iklw 288 (430)
T KOG0640|consen 217 EPVRSISFHPSGEFLLVGTDHPTLRLYDVNT--------YQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLW 288 (430)
T ss_pred ceeeeEeecCCCceEEEecCCCceeEEeccc--------eeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEee
Confidence 4889998875 5899999888999998752 2222 211 1347899998875 678854 3 5799999
Q ss_pred eCCCCcEEEEEE-ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 87 DPKSLVVLKSFD-AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 87 d~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
|--+.++.++|. +| ..+.|...++..+|- .+|-+.|++++||...|++.+++.-
T Consensus 289 DGVS~rCv~t~~~AH--~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~Yt 344 (430)
T KOG0640|consen 289 DGVSNRCVRTIGNAH--GGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYT 344 (430)
T ss_pred ccccHHHHHHHHhhc--CCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEe
Confidence 999999999987 45 357899999997776 6788899999999999999998874
No 123
>KOG0973|consensus
Probab=98.02 E-value=6.2e-05 Score=68.12 Aligned_cols=124 Identities=18% Similarity=0.268 Sum_probs=90.7
Q ss_pred CceeeeEEeCC-eEEEE-e--cCCcEEEEEcCC----CCCCCCCcceEE-EeCCCCCceEEEeee--CCEEEEEeCCe-E
Q psy16020 16 DTALPPVHVQG-RVVCA-L--ADGSVAIFRRGP----DGQWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGYKNK-I 83 (151)
Q Consensus 16 ~~V~~i~~~~~-~v~vg-l--~nG~l~v~~~~~----~~~wd~~~~~~i-~l~~~~~pV~~m~~v--~~~Lw~g~~n~-I 83 (151)
.+|++|--+++ ..|+. + .||.+.||+... ...||...|+.+ +..++..+|+|.-+. +..|+.|++++ |
T Consensus 14 ~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v 93 (942)
T KOG0973|consen 14 KSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLV 93 (942)
T ss_pred eeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceE
Confidence 46888866654 33443 3 467788998763 223555434443 455566999999776 35688888875 6
Q ss_pred EEEeCC------------------CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 84 HVVDPK------------------SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 84 ~vid~~------------------t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.||.-. ..+....+.+|+. -|..+++++++. ++|++.|++|.+|+.+||+++..++
T Consensus 94 ~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~---DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~ 168 (942)
T KOG0973|consen 94 MIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDS---DVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLR 168 (942)
T ss_pred EEeeecccCCcccccccccccccceeeEEEEEecCCC---ccceeccCCCccEEEEecccceEEEEccccceeeeeee
Confidence 777654 2347788899964 799999998877 8999999999999999999998885
No 124
>KOG1332|consensus
Probab=98.02 E-value=1.9e-05 Score=61.93 Aligned_cols=116 Identities=21% Similarity=0.338 Sum_probs=79.5
Q ss_pred CCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcc-eEEEeCC-----CCCceEE------EeeeCCEE-EE
Q psy16020 15 LDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKY-HTVTLGL-----PHHSVRS------LAAVYNKV-WC 77 (151)
Q Consensus 15 ~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~-~~i~l~~-----~~~pV~~------m~~v~~~L-w~ 77 (151)
..+|.++.+.+. .|++|.+||+|.|++.+++|.|+.+.. ..-++|- .+..+.- ++---.+| =.
T Consensus 102 ~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSg 181 (299)
T KOG1332|consen 102 SASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSG 181 (299)
T ss_pred cccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeecc
Confidence 468999988765 499999999999999999888976432 1112221 0010000 00001233 35
Q ss_pred EeCCeEEEEeCCC--CcEEEEEEecCCCCCceeEEEEeCC-----EEEEEEcCCCeEEEEeCC
Q psy16020 78 GYKNKIHVVDPKS--LVVLKSFDAHPRRESQVRQMTWAGD-----GVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 78 g~~n~I~vid~~t--~~i~~~~~~h~~~~~~I~~m~~~~~-----~vwis~~~d~~l~lwd~~ 133 (151)
||+|.|.||+-++ .+.+++|++|+| -|+.++..+. .-..|++.|+++.+|-.+
T Consensus 182 GcDn~VkiW~~~~~~w~~e~~l~~H~d---wVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~ 241 (299)
T KOG1332|consen 182 GCDNLVKIWKFDSDSWKLERTLEGHKD---WVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD 241 (299)
T ss_pred CCccceeeeecCCcchhhhhhhhhcch---hhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence 7889899987665 568888999998 7777777744 237899999999999776
No 125
>KOG1188|consensus
Probab=98.01 E-value=5.2e-05 Score=61.63 Aligned_cols=136 Identities=14% Similarity=0.168 Sum_probs=96.2
Q ss_pred CceeeeeeCC-CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeee--CCEEEE
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAV--YNKVWC 77 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v--~~~Lw~ 77 (151)
.+.+..++-+ +.+..+.+.. .-|+.+..||+|..|+....+ ....+.-. .+..|-.|+... ++.+.|
T Consensus 60 g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~-----e~a~~~~~~~~~~~f~~ld~nck~~ii~~ 134 (376)
T KOG1188|consen 60 GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQA-----ESARISWTQQSGTPFICLDLNCKKNIIAC 134 (376)
T ss_pred hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecch-----hhhheeccCCCCCcceEeeccCcCCeEEe
Confidence 4566777744 6666666643 479999999999999876332 11223332 223789999995 456778
Q ss_pred EeC----C-eEEEEeCCCCcE-EEE-EEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc----cceeeeEeCC
Q psy16020 78 GYK----N-KIHVVDPKSLVV-LKS-FDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT----YQHLQDVDIE 144 (151)
Q Consensus 78 g~~----n-~I~vid~~t~~i-~~~-~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t----~~~l~~idi~ 144 (151)
|.. + .++.||.+.-+- .+. ++.|.| -|+++.+-++ ..++|++-|+.+.|||+.. --+++.||..
T Consensus 135 GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~D---DVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~ 211 (376)
T KOG1188|consen 135 GTELTRSDASVVLWDVRSEQQLLRQLNESHND---DVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHG 211 (376)
T ss_pred ccccccCceEEEEEEeccccchhhhhhhhccC---cceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhccc
Confidence 873 3 699999987664 555 667877 7888888855 4599999999999999984 3356667766
Q ss_pred ccccc
Q psy16020 145 PYVSK 149 (151)
Q Consensus 145 ~~v~~ 149 (151)
..+++
T Consensus 212 sSI~~ 216 (376)
T KOG1188|consen 212 SSIHL 216 (376)
T ss_pred ceeee
Confidence 66554
No 126
>KOG0645|consensus
Probab=98.00 E-value=0.00067 Score=53.90 Aligned_cols=120 Identities=15% Similarity=0.278 Sum_probs=88.4
Q ss_pred CceeeeEEeCCe---EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCC
Q psy16020 16 DTALPPVHVQGR---VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~~~---v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~ 89 (151)
+.+-.+..+++. ++.+..|-.|.+|+..+...|.+. .+-=..++..||+++.. +..|.+|+ +..+.||.-.
T Consensus 15 ~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck---~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~ 91 (312)
T KOG0645|consen 15 DRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCK---TVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKE 91 (312)
T ss_pred CcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEE---EeccccchheeeeeeecCCCcEEEEeeccceEEEeecC
Confidence 567777787773 666677778999998753345332 21112467999999994 56677777 5678788655
Q ss_pred --CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc---cceeeeE
Q psy16020 90 --SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT---YQHLQDV 141 (151)
Q Consensus 90 --t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t---~~~l~~i 141 (151)
++++..++|+|.+ .|.+++++.+|- +.+++||-.+=+|.+.. |++..-+
T Consensus 92 ~~efecv~~lEGHEn---EVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL 146 (312)
T KOG0645|consen 92 DGEFECVATLEGHEN---EVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVL 146 (312)
T ss_pred CCceeEEeeeecccc---ceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeee
Confidence 4678899999986 899999997765 89999999999999873 5554444
No 127
>KOG0299|consensus
Probab=97.99 E-value=4.1e-05 Score=64.14 Aligned_cols=118 Identities=14% Similarity=0.189 Sum_probs=83.2
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCC----CCCCCcc---eE--EEeC--CCCCceEEEeeeCCEEEEEe---
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDG----QWDLSKY---HT--VTLG--LPHHSVRSLAAVYNKVWCGY--- 79 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~----~wd~~~~---~~--i~l~--~~~~pV~~m~~v~~~Lw~g~--- 79 (151)
-+|.|+...++ ++|-+.-||+|.-|....+. .|.-+.. +. ++.+ .+..-+-||++..+.=|.+.
T Consensus 143 ~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~ 222 (479)
T KOG0299|consen 143 LSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGR 222 (479)
T ss_pred CcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCC
Confidence 47888877765 89999999999988764322 3322100 11 1112 22355677777654333333
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccc
Q psy16020 80 KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 80 ~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~ 136 (151)
++.|.|||++|++..+.|.+|.+ .|.++++- |..-++|++.|..+++|+.....
T Consensus 223 d~~v~Iw~~~t~ehv~~~~ghr~---~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s 277 (479)
T KOG0299|consen 223 DRHVQIWDCDTLEHVKVFKGHRG---AVSSLAFRKGTSELYSASADRSVKVWSIDQLS 277 (479)
T ss_pred CceEEEecCcccchhhccccccc---ceeeeeeecCccceeeeecCCceEEEehhHhH
Confidence 35799999999999999999976 89888887 44448899999999999988543
No 128
>KOG1408|consensus
Probab=97.99 E-value=2.3e-05 Score=69.01 Aligned_cols=138 Identities=17% Similarity=0.189 Sum_probs=95.4
Q ss_pred CCCCceeeeee-CCCce---eeeEEeCCeEEEEecCCcEEEEEcCC----------------------CCC----CCCCc
Q psy16020 3 YPHPTPYPLNK-ILDTA---LPPVHVQGRVVCALADGSVAIFRRGP----------------------DGQ----WDLSK 52 (151)
Q Consensus 3 ~~~~~~l~~i~-l~~~V---~~i~~~~~~v~vgl~nG~l~v~~~~~----------------------~~~----wd~~~ 52 (151)
..|-+|+|.++ +|=.| ..-+--++......+||+|.+|+... ++. -|.+.
T Consensus 366 lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~ 445 (1080)
T KOG1408|consen 366 LYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASA 445 (1080)
T ss_pred eeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccC
Confidence 35778999986 55111 11122244556677799999997752 000 00000
Q ss_pred c----eEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe----CCEEEEEE
Q psy16020 53 Y----HTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA----GDGVWVSI 121 (151)
Q Consensus 53 ~----~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~----~~~vwis~ 121 (151)
+ ......++.--+||+.+.. .+|..|- +++++|+|+.+++....+++|. +.|.|+.++ +..++.|+
T Consensus 446 ~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHe---sEilcLeyS~p~~~~kLLASa 522 (1080)
T KOG1408|consen 446 GIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHE---SEILCLEYSFPVLTNKLLASA 522 (1080)
T ss_pred CcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheeccc---ceeEEEeecCchhhhHhhhhc
Confidence 0 0112223456789999975 4577665 4799999999999999999996 489999999 44669999
Q ss_pred cCCCeEEEEeCCc-cceeeeEeC
Q psy16020 122 RLDSTLRMYNAHT-YQHLQDVDI 143 (151)
Q Consensus 122 ~~d~~l~lwd~~t-~~~l~~idi 143 (151)
++|..|.+||+.. |.++|.+|=
T Consensus 523 srdRlIHV~Dv~rny~l~qtld~ 545 (1080)
T KOG1408|consen 523 SRDRLIHVYDVKRNYDLVQTLDG 545 (1080)
T ss_pred cCCceEEEEecccccchhhhhcc
Confidence 9999999999975 999998873
No 129
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=97.98 E-value=3.8e-05 Score=42.48 Aligned_cols=38 Identities=21% Similarity=0.500 Sum_probs=33.8
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEe
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYN 131 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd 131 (151)
++++++|.+|+. .|++|.+.++ ..++|++.|+.|++||
T Consensus 1 g~~~~~~~~h~~---~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSS---SINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSS---SEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCC---cEEEEEEecccccceeeCCCCEEEEEC
Confidence 467899999975 9999999977 5689999999999998
No 130
>KOG0300|consensus
Probab=97.98 E-value=0.00012 Score=59.58 Aligned_cols=131 Identities=13% Similarity=0.121 Sum_probs=82.7
Q ss_pred CceeeeEEeCCe--EEEEecCCcEEEEEcC------C----------------CC-CCCCC------cce----EEEeCC
Q psy16020 16 DTALPPVHVQGR--VVCALADGSVAIFRRG------P----------------DG-QWDLS------KYH----TVTLGL 60 (151)
Q Consensus 16 ~~V~~i~~~~~~--v~vgl~nG~l~v~~~~------~----------------~~-~wd~~------~~~----~i~l~~ 60 (151)
.+|.||++++.. +..|.+|++--+|... . |. .-|.+ .+. ...+-.
T Consensus 191 GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltg 270 (481)
T KOG0300|consen 191 GSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTG 270 (481)
T ss_pred cceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeec
Confidence 699999998765 5556666677777522 0 00 00110 000 112222
Q ss_pred CCCceEEEee-e-CCEEEEEeCC-eEEEEeCCCCcEEEEEEe--------------------------------------
Q psy16020 61 PHHSVRSLAA-V-YNKVWCGYKN-KIHVVDPKSLVVLKSFDA-------------------------------------- 99 (151)
Q Consensus 61 ~~~pV~~m~~-v-~~~Lw~g~~n-~I~vid~~t~~i~~~~~~-------------------------------------- 99 (151)
+..+|-|..- + ++++-.|+++ .-.+||.+|+++.+.+.+
T Consensus 271 H~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV 350 (481)
T KOG0300|consen 271 HRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSV 350 (481)
T ss_pred cccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhccee
Confidence 3455554443 2 3567777765 467888888887765554
Q ss_pred -----cCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc-cceeeeEeCCccccc
Q psy16020 100 -----HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT-YQHLQDVDIEPYVSK 149 (151)
Q Consensus 100 -----h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t-~~~l~~idi~~~v~~ 149 (151)
|++ .|+..++.-+.-.+|+++|.+|++||.+. ..++..|....++++
T Consensus 351 ~VFQGHtd---tVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NR 403 (481)
T KOG0300|consen 351 AVFQGHTD---TVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTDSPANR 403 (481)
T ss_pred eeeccccc---ceeEEEEecCCceeecCCCceEEEeeeccccCcceeeecCCccce
Confidence 443 56666666555567999999999999987 778888887777665
No 131
>KOG1332|consensus
Probab=97.96 E-value=8.2e-05 Score=58.37 Aligned_cols=108 Identities=18% Similarity=0.245 Sum_probs=81.6
Q ss_pred EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe--CCeEEEEeCCCCcEEEE
Q psy16020 22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY--KNKIHVVDPKSLVVLKS 96 (151)
Q Consensus 22 ~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~--~n~I~vid~~t~~i~~~ 96 (151)
-|.+.++-.+.+||+|.||...+.++ .....+|-.+..||-.++... +.+-++| +++|.||.-++++-.+.
T Consensus 20 DyygkrlATcsSD~tVkIf~v~~n~~----s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~ 95 (299)
T KOG1332|consen 20 DYYGKRLATCSSDGTVKIFEVRNNGQ----SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKA 95 (299)
T ss_pred hhhcceeeeecCCccEEEEEEcCCCC----ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhh
Confidence 46788999999999999999876553 334557776779999999864 5555555 78999999888864443
Q ss_pred EEecCCCCCceeEEEEeCC--EE-EEEEcCCCeEEEEeCCc
Q psy16020 97 FDAHPRRESQVRQMTWAGD--GV-WVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 97 ~~~h~~~~~~I~~m~~~~~--~v-wis~~~d~~l~lwd~~t 134 (151)
.+ |+.-+.+|+++...+. |. +.+++.|+.|.+.+.++
T Consensus 96 ~e-~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~ 135 (299)
T KOG1332|consen 96 YE-HAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDS 135 (299)
T ss_pred hh-hhhhcccceeecccccccceEEEEeeCCCcEEEEEEcC
Confidence 33 3333469999998855 44 78889999999988775
No 132
>KOG0302|consensus
Probab=97.95 E-value=0.00017 Score=59.50 Aligned_cols=111 Identities=14% Similarity=0.223 Sum_probs=82.3
Q ss_pred CceeeeEE---eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEeC-CeEEEEeCC
Q psy16020 16 DTALPPVH---VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGYK-NKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~---~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~~-n~I~vid~~ 89 (151)
++|-+|.+ ..+-++.+..||+|.||+..++.. .+.. ..-.++.-|+.+..+.+. |..|.+ +.+.|||++
T Consensus 258 ~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~----~~~~-~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR 332 (440)
T KOG0302|consen 258 KSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPK----KAAV-STKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLR 332 (440)
T ss_pred cchhhhccCCccCceEEeeecCceEEEEEecCCCc----ccee-EeeccCCceeeEEccCCcceeeecCCCceEEEEEhh
Confidence 68888888 344566677899999999865321 2222 223344788888887643 444444 589999998
Q ss_pred CCc---EEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCc
Q psy16020 90 SLV---VLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 90 t~~---i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t 134 (151)
+++ ...+|.-|.. +|+++.+. .+.+..+.+.|.+|.+||...
T Consensus 333 ~~~~~~pVA~fk~Hk~---pItsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 333 QFKSGQPVATFKYHKA---PITSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred hccCCCcceeEEeccC---CeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence 655 6678998875 99999998 468899999999999999874
No 133
>KOG0289|consensus
Probab=97.95 E-value=0.00019 Score=60.02 Aligned_cols=132 Identities=11% Similarity=0.061 Sum_probs=95.4
Q ss_pred CCCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCE-EEE
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNK-VWC 77 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~-Lw~ 77 (151)
++-+.|..++=. -.|++..+++. .++.|.+|-.|.||+.. +.+.+..+... ++||+.+... ++. ||+
T Consensus 249 ~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~-----~~s~~~~~~~h--~~~V~~ls~h~tgeYllsA 321 (506)
T KOG0289|consen 249 PSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVP-----LSSEPTSSRPH--EEPVTGLSLHPTGEYLLSA 321 (506)
T ss_pred chhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccc-----cccCccccccc--cccceeeeeccCCcEEEEe
Confidence 444444444433 47888888776 48999999999999864 22344444443 4999999986 344 677
Q ss_pred EeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 78 GYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 78 g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
..++..---|.+++........- -++..+++.++-++|. +.++..|+.|++||..+..-+..+..
T Consensus 322 s~d~~w~Fsd~~~g~~lt~vs~~-~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpg 387 (506)
T KOG0289|consen 322 SNDGTWAFSDISSGSQLTVVSDE-TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPG 387 (506)
T ss_pred cCCceEEEEEccCCcEEEEEeec-cccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCC
Confidence 66777777888898876665532 2345699999999998 78889999999999998877666643
No 134
>KOG1407|consensus
Probab=97.95 E-value=0.00025 Score=56.17 Aligned_cols=132 Identities=12% Similarity=0.068 Sum_probs=99.0
Q ss_pred CCceeeeeeCCCceeeeEE-eCCeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee--e--CCEEEEE
Q psy16020 5 HPTPYPLNKILDTALPPVH-VQGRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA--V--YNKVWCG 78 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~-~~~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~--v--~~~Lw~g 78 (151)
.++.+.+-+.+--+..|.. ..|.+|.. .++|+|-|.++. .+++...|+- +|..|+.+ - +..+.+|
T Consensus 137 ~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsyp-----sLkpv~si~A----H~snCicI~f~p~GryfA~G 207 (313)
T KOG1407|consen 137 TYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYP-----SLKPVQSIKA----HPSNCICIEFDPDGRYFATG 207 (313)
T ss_pred ccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEecc-----cccccccccc----CCcceEEEEECCCCceEeec
Confidence 4566666666655555555 34455554 455899999886 3444444443 45555555 3 4668899
Q ss_pred eCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020 79 YKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 148 (151)
Q Consensus 79 ~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~ 148 (151)
+.+ .+-.||++.+-+++.|.-+. -+|..+.++-+|- +.|+++|-.|-+=+++|++.+.+|.++.+..
T Consensus 208 sADAlvSLWD~~ELiC~R~isRld---wpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~ 276 (313)
T KOG1407|consen 208 SADALVSLWDVDELICERCISRLD---WPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTF 276 (313)
T ss_pred cccceeeccChhHhhhheeecccc---CceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCce
Confidence 876 79999999999999999774 5999999996665 8999999999999999999999999887654
No 135
>KOG1188|consensus
Probab=97.94 E-value=2.5e-05 Score=63.47 Aligned_cols=73 Identities=16% Similarity=0.241 Sum_probs=56.0
Q ss_pred CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 73 NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 73 ~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
+.+.+++.| .|+++|..|++....|.+++.....|.-+..++..+.+|++.|++||+||+++......|+...
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~ 114 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQ 114 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccC
Confidence 568899875 8999999999999999999874334443333223446799999999999999988777665443
No 136
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.94 E-value=0.00036 Score=57.59 Aligned_cols=114 Identities=9% Similarity=0.016 Sum_probs=81.3
Q ss_pred eCCeEEEEecC-----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-----------CeEEEEe
Q psy16020 24 VQGRVVCALAD-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-----------NKIHVVD 87 (151)
Q Consensus 24 ~~~~v~vgl~n-----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-----------n~I~vid 87 (151)
...++||--.. |+|.|++... .+....++.|. .|---+..-+++||+++. +.|.|||
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~-----~~v~g~i~~G~--~P~~~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D 83 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEA-----GRVLGMTDGGF--LPNPVVASDGSFFAHASTVYSRIARGKRTDYVEVID 83 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCC-----CEEEEEEEccC--CCceeECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 34567766655 8999998752 34556788886 554323333578998876 6899999
Q ss_pred CCCCcEEEEEEecCCCC----CceeEEEEeCCEEEEEEcC---CCeEEEEeCCccceeeeEeCC
Q psy16020 88 PKSLVVLKSFDAHPRRE----SQVRQMTWAGDGVWVSIRL---DSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~----~~I~~m~~~~~~vwis~~~---d~~l~lwd~~t~~~l~~idi~ 144 (151)
+.|++..+++..-.+++ ..-..+.++++|-|+-..+ ++.|-+.|+.+.+.+.+|++-
T Consensus 84 ~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp 147 (352)
T TIGR02658 84 PQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP 147 (352)
T ss_pred CccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC
Confidence 99999999999644322 2344666666665444333 899999999999999999874
No 137
>KOG0308|consensus
Probab=97.91 E-value=0.0003 Score=61.38 Aligned_cols=111 Identities=13% Similarity=0.058 Sum_probs=87.3
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEE-EEeCCeEEEEeCCC
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVW-CGYKNKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw-~g~~n~I~vid~~t 90 (151)
++|++|.-.++ -+..|..++.|.+|+... ..+.++|..+...||++.+.+ .++- +++++.|.+||+.-
T Consensus 172 ~siYSLA~N~t~t~ivsGgtek~lr~wDprt-------~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq 244 (735)
T KOG0308|consen 172 DSIYSLAMNQTGTIIVSGGTEKDLRLWDPRT-------CKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ 244 (735)
T ss_pred cceeeeecCCcceEEEecCcccceEEecccc-------ccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence 68888887766 455566678899987642 235677877779999999985 4555 45578999999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~ 136 (151)
-+++.++.+|++ .|=++.++++ ...+|+++|+.|..=|.++++
T Consensus 245 QrCl~T~~vH~e---~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~ 288 (735)
T KOG0308|consen 245 QRCLATYIVHKE---GVWALQSSPSFTHVYSGGRDGNIYRTDLRNPA 288 (735)
T ss_pred cceeeeEEeccC---ceEEEeeCCCcceEEecCCCCcEEecccCCch
Confidence 999999999987 5888877755 448899999999999999853
No 138
>KOG0288|consensus
Probab=97.90 E-value=2.3e-06 Score=70.76 Aligned_cols=123 Identities=12% Similarity=0.084 Sum_probs=88.5
Q ss_pred ceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE--EEEEeCCeEEEEeCCCC
Q psy16020 17 TALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK--VWCGYKNKIHVVDPKSL 91 (151)
Q Consensus 17 ~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~--Lw~g~~n~I~vid~~t~ 91 (151)
-|.++.+..+ .++.|.+|-.|.+|+....+ .+. .=.|..+..||+.|.+- +++ |..+.++..++||..++
T Consensus 177 ev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k---~~~--~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~ 251 (459)
T KOG0288|consen 177 EVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK---SEL--ISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSL 251 (459)
T ss_pred ccceeEEccCcchhhhcchhhhhhhhhcccch---hhh--hhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccch
Confidence 4555555443 68888888888888754222 111 11344455899999994 444 33444568999999999
Q ss_pred cEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
+...+|.+|++ .|++..+.-... -+|+++|.+|++||.....+..++.+....
T Consensus 252 r~~~TLsGHtd---kVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~c 305 (459)
T KOG0288|consen 252 RLRHTLSGHTD---KVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQC 305 (459)
T ss_pred hhhhhhccccc---ceeeehhhccccceeeccccchhhhhhhhhhheeccccccccc
Confidence 99999999998 888888774444 789999999999999988888877655443
No 139
>KOG2106|consensus
Probab=97.89 E-value=0.0006 Score=58.18 Aligned_cols=122 Identities=15% Similarity=0.087 Sum_probs=90.3
Q ss_pred CCceeeeeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-
Q psy16020 5 HPTPYPLNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK- 80 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~- 80 (151)
..+.+|+.+.-+++.|.-+++ |.|-+|.+.|...|++. +....+.+....+|+.+|.+. ++.|.+|+.
T Consensus 397 ~~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~--------e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d 468 (626)
T KOG2106|consen 397 DHKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDT--------ETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHD 468 (626)
T ss_pred CCceeEEEEecCceeEeeccCcceEEEeeccceEEEEec--------ccceeEEEEecCCceEEEEEcCCCCEEEEecCC
Confidence 568899999999999998865 47889999999999975 344555555446999999996 578999995
Q ss_pred CeEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020 81 NKIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 81 n~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~ 136 (151)
|.||++-.. ++......--++- ++|+++.++.++- +.+-+-|-.|-.|.+....
T Consensus 469 ~~iyiy~Vs~~g~~y~r~~k~~g--s~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~ 524 (626)
T KOG2106|consen 469 NHIYIYRVSANGRKYSRVGKCSG--SPITHLDWSSDSQFLVSNSGDYEILYWKPSECK 524 (626)
T ss_pred CeEEEEEECCCCcEEEEeeeecC--ceeEEeeecCCCceEEeccCceEEEEEccccCc
Confidence 567666544 2332233332322 7999999997766 7788889999999666543
No 140
>KOG0313|consensus
Probab=97.89 E-value=0.00012 Score=60.30 Aligned_cols=117 Identities=18% Similarity=0.153 Sum_probs=80.0
Q ss_pred CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-C----CEEEEE
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-Y----NKVWCG 78 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~----~~Lw~g 78 (151)
+-|+.++.+.-+|=|-++.-.++.++.|.=||++.+|++. | -....+.++..||++.+-+ . ..+-.|
T Consensus 94 ~aP~pl~~~~hdDWVSsv~~~~~~IltgsYDg~~riWd~~--G------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsa 165 (423)
T KOG0313|consen 94 TAPKPLQCFLHDDWVSSVKGASKWILTGSYDGTSRIWDLK--G------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSA 165 (423)
T ss_pred CCCCccccccchhhhhhhcccCceEEEeecCCeeEEEecC--C------ceEEEEecCCcceeeeEEEecCCccceEEEe
Confidence 3455666666666666666667899999999999999875 2 1233444456999966654 2 225555
Q ss_pred eCC-e--EEEEeCCCCcE--EEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEe
Q psy16020 79 YKN-K--IHVVDPKSLVV--LKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYN 131 (151)
Q Consensus 79 ~~n-~--I~vid~~t~~i--~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd 131 (151)
+.+ + .+.|+...... ++.-.+|.+ .|.++...++|- .+|++-|..|++|+
T Consensus 166 s~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~---~V~sVsv~~sgtr~~SgS~D~~lkiWs 221 (423)
T KOG0313|consen 166 SMDQTLRLWKWNVGENKVKALKVCRGHKR---SVDSVSVDSSGTRFCSGSWDTMLKIWS 221 (423)
T ss_pred cCCceEEEEEecCchhhhhHHhHhccccc---ceeEEEecCCCCeEEeecccceeeecc
Confidence 555 3 55555544433 333448976 899988776665 99999999999999
No 141
>KOG2445|consensus
Probab=97.88 E-value=0.00034 Score=56.42 Aligned_cols=111 Identities=20% Similarity=0.271 Sum_probs=79.4
Q ss_pred CceeeeEE--eCCeEEEEecCCcEEEEE-cCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe--CCeEEEEe
Q psy16020 16 DTALPPVH--VQGRVVCALADGSVAIFR-RGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY--KNKIHVVD 87 (151)
Q Consensus 16 ~~V~~i~~--~~~~v~vgl~nG~l~v~~-~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~--~n~I~vid 87 (151)
|-|.|..| ++.++-.+.+|+++.||+ .+..|.|.... ..+.++ .+|-.+.-.. +++-+.| +..+.||.
T Consensus 14 DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts--~Wrah~--~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 14 DLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTS--SWRAHD--GSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred ceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEee--eEEecC--CcEEEEEecCccccceEEEEecCCceeeee
Confidence 56777766 577899999999999999 67788886543 456666 7776666642 5544444 56899996
Q ss_pred CCCCcEEEEEEec----------CCCCCceeEEEEeCC--EE-EEEEcCCCeEEEEeCCc
Q psy16020 88 PKSLVVLKSFDAH----------PRRESQVRQMTWAGD--GV-WVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 88 ~~t~~i~~~~~~h----------~~~~~~I~~m~~~~~--~v-wis~~~d~~l~lwd~~t 134 (151)
-. ++.+++| .|..++|+.+.+.+. |. ..+++.|++||+|++-.
T Consensus 90 E~----~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~d 145 (361)
T KOG2445|consen 90 EQ----EKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPD 145 (361)
T ss_pred ec----ccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCC
Confidence 42 2223322 244578999999865 44 89999999999999864
No 142
>KOG0270|consensus
Probab=97.88 E-value=0.0001 Score=61.52 Aligned_cols=120 Identities=18% Similarity=0.129 Sum_probs=86.0
Q ss_pred eeeeeeCCCceeeeEEe---------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC------------------
Q psy16020 8 PYPLNKILDTALPPVHV---------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL------------------ 60 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~~---------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~------------------ 60 (151)
+-|-+=||...+|+... +|++-+|.-|-.|-||+..-- |.-.| .+.||.
T Consensus 166 vHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~---d~v~P-~~~LGs~~sk~~~k~~k~~~~~~g 241 (463)
T KOG0270|consen 166 VHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIV---DAVLP-CVTLGSKASKKKKKKGKRSNSASG 241 (463)
T ss_pred EecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccc---ccccc-ceeechhhhhhhhhhccccccccc
Confidence 44566788888998663 468999999999999987511 11122 334542
Q ss_pred CCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc
Q psy16020 61 PHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 61 ~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t 134 (151)
+..-|-.|+.+. +-|.-|+. .+|.+||..++++.++++.|.. .|++|.+-+ ..++++++.|+++.|+|.|.
T Consensus 242 HTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k---~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 242 HTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGK---KVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred chHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCC---ceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 111222333332 44666664 5899999999999999998865 999999984 46799999999999999994
No 143
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.87 E-value=0.0017 Score=52.08 Aligned_cols=129 Identities=10% Similarity=0.104 Sum_probs=79.1
Q ss_pred eeeeeCCCceeeeEEe--CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CC
Q psy16020 9 YPLNKILDTALPPVHV--QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KN 81 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~--~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n 81 (151)
+.++.+++.+..|... ++++|++. .+|.|.+|+.+.+|... ..+..........++.+. ++.+|+++ +|
T Consensus 73 ~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~----~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~ 148 (330)
T PRK11028 73 AAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPV----APIQIIEGLEGCHSANIDPDNRTLWVPCLKED 148 (330)
T ss_pred eeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCC----CceeeccCCCcccEeEeCCCCCEEEEeeCCCC
Confidence 4445566566666665 44688876 47899999987555321 111111101334555554 35788887 37
Q ss_pred eEEEEeCCC-CcEEE----EEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCC----ccceeeeEeC
Q psy16020 82 KIHVVDPKS-LVVLK----SFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH----TYQHLQDVDI 143 (151)
Q Consensus 82 ~I~vid~~t-~~i~~----~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~----t~~~l~~idi 143 (151)
+|.+||.++ +++.. ..... .....++|.++++ .++++...++.|.+||.. +.+..++++.
T Consensus 149 ~v~v~d~~~~g~l~~~~~~~~~~~--~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~ 219 (330)
T PRK11028 149 RIRLFTLSDDGHLVAQEPAEVTTV--EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDM 219 (330)
T ss_pred EEEEEEECCCCcccccCCCceecC--CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEec
Confidence 999999976 33321 11211 1245678888866 556777779999999986 3466777754
No 144
>KOG2096|consensus
Probab=97.86 E-value=0.00037 Score=56.63 Aligned_cols=125 Identities=14% Similarity=0.161 Sum_probs=78.1
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcce--EEEeCCC-CCceEEEeeeCC----EEEEEeCCeEEEE
Q psy16020 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYH--TVTLGLP-HHSVRSLAAVYN----KVWCGYKNKIHVV 86 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~--~i~l~~~-~~pV~~m~~v~~----~Lw~g~~n~I~vi 86 (151)
+.|+|+.+. ++++-...+||+|.+|+.. |+.... .+...-+ ..| +.+.+.++ -+||..||++++|
T Consensus 87 ~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~-----DF~~~eHr~~R~nve~dhp-T~V~FapDc~s~vv~~~~g~~l~vy 160 (420)
T KOG2096|consen 87 KEVTDVAFSSDGKKLATISGDRSIRLWDVR-----DFENKEHRCIRQNVEYDHP-TRVVFAPDCKSVVVSVKRGNKLCVY 160 (420)
T ss_pred CceeeeEEcCCCceeEEEeCCceEEEEecc-----hhhhhhhhHhhccccCCCc-eEEEECCCcceEEEEEccCCEEEEE
Confidence 699999985 3478888899999999886 443332 2221110 133 23344432 2778889999998
Q ss_pred eCC---CCcEEEE------EEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 87 DPK---SLVVLKS------FDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 87 d~~---t~~i~~~------~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
-.. .|..-.. ++-|......|..+-..++++ .+|++.|..|.|||.+ ++.|+.||.....
T Consensus 161 k~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~ 230 (420)
T KOG2096|consen 161 KLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSS 230 (420)
T ss_pred EeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccccc
Confidence 643 1221111 111111112344455556666 7899999999999999 9999999965543
No 145
>KOG0643|consensus
Probab=97.85 E-value=0.00017 Score=57.26 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=73.7
Q ss_pred EEeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEe
Q psy16020 56 VTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYN 131 (151)
Q Consensus 56 i~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd 131 (151)
|.+-.+..|++-+-++ ++.|-..| +...-||=..+|+.+.+..+|+. .|-|+..+-+ .-.++++-|.+++|||
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtG---avW~~Did~~s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTG---AVWCCDIDWDSKHLITGSADQTAKLWD 80 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCc---eEEEEEecCCcceeeeccccceeEEEE
Confidence 3444467999999997 45555555 35799999999999999999985 8999988844 3489999999999999
Q ss_pred CCccceeeeEeCCcccc
Q psy16020 132 AHTYQHLQDVDIEPYVS 148 (151)
Q Consensus 132 ~~t~~~l~~idi~~~v~ 148 (151)
+++++.+..++.-.+|.
T Consensus 81 v~tGk~la~~k~~~~Vk 97 (327)
T KOG0643|consen 81 VETGKQLATWKTNSPVK 97 (327)
T ss_pred cCCCcEEEEeecCCeeE
Confidence 99999999998776664
No 146
>KOG0772|consensus
Probab=97.85 E-value=0.00031 Score=59.97 Aligned_cols=129 Identities=14% Similarity=0.151 Sum_probs=86.4
Q ss_pred eeeeCC---CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC-CCceEEEeee--CCEEEEEeCC
Q psy16020 10 PLNKIL---DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP-HHSVRSLAAV--YNKVWCGYKN 81 (151)
Q Consensus 10 ~~i~l~---~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-~~pV~~m~~v--~~~Lw~g~~n 81 (151)
++|+|+ ..|..|... +-+++.|.-|-++..|+... .|...+.--.|-.+ .++|+++.+. ++++-|.+|+
T Consensus 159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~g---Mdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~ 235 (641)
T KOG0772|consen 159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQG---MDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGS 235 (641)
T ss_pred ceEeccCCceEEEEeeecCCCceeeeccccceEEEEeccc---ccccchhhhccCcccccccceeeecCCCCeEEEEecC
Confidence 466666 367777664 34899999999999998861 12222221122211 2899999985 6889999987
Q ss_pred -eEEEEeCCCCcEEEEEEecC------CCC---CceeEEEEeC--CEEEEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020 82 -KIHVVDPKSLVVLKSFDAHP------RRE---SQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT-YQHLQDV 141 (151)
Q Consensus 82 -~I~vid~~t~~i~~~~~~h~------~~~---~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t-~~~l~~i 141 (151)
+..++|.+.+++.....+.. +.. ..++|-.+-+ .+.+++++.|+++|+||... .++++-|
T Consensus 236 aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVi 308 (641)
T KOG0772|consen 236 AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVI 308 (641)
T ss_pred cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEE
Confidence 79999999888776655321 000 1344433332 24589999999999999985 5666666
No 147
>KOG0647|consensus
Probab=97.84 E-value=0.00059 Score=54.92 Aligned_cols=131 Identities=12% Similarity=0.185 Sum_probs=91.6
Q ss_pred CCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CC
Q psy16020 5 HPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KN 81 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n 81 (151)
+...+.+++||+.++++--....+.||+++-.|++|....+. .+.+.++-. -+.-+||++... +.-..|+ .+
T Consensus 146 ~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~----te~k~~~Sp-Lk~Q~R~va~f~d~~~~alGsiEG 220 (347)
T KOG0647|consen 146 SSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPP----TEFKRIESP-LKWQTRCVACFQDKDGFALGSIEG 220 (347)
T ss_pred CCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCc----chhhhhcCc-ccceeeEEEEEecCCceEeeeecc
Confidence 456789999999999998777789999999999999885321 111222111 135678988863 2234555 68
Q ss_pred eEEEEeCCCC--cEEEEEEecCCCC------CceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeee
Q psy16020 82 KIHVVDPKSL--VVLKSFDAHPRRE------SQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 82 ~I~vid~~t~--~i~~~~~~h~~~~------~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
++.|...+.. +-.-+|..|.+.+ -.|+.+++-+ .|-+++.+.|++...||......|.+
T Consensus 221 rv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~ 288 (347)
T KOG0647|consen 221 RVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKT 288 (347)
T ss_pred eEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhc
Confidence 8777776665 5566688886422 2466666664 36699999999999999986655554
No 148
>KOG1007|consensus
Probab=97.84 E-value=0.0001 Score=59.06 Aligned_cols=119 Identities=15% Similarity=0.173 Sum_probs=82.1
Q ss_pred CceeeeEEeCCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC---CCceEEEee---e-CCEEEEEeCCeEEEEe
Q psy16020 16 DTALPPVHVQGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP---HHSVRSLAA---V-YNKVWCGYKNKIHVVD 87 (151)
Q Consensus 16 ~~V~~i~~~~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~---~~pV~~m~~---v-~~~Lw~g~~n~I~vid 87 (151)
..|.|+.+.+|. =.+++.+..|++|++.+...- ...+....+ +...++-.- . ++++-+..+.++..||
T Consensus 124 g~i~cvew~Pns~klasm~dn~i~l~~l~ess~~----vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D 199 (370)
T KOG1007|consen 124 GKINCVEWEPNSDKLASMDDNNIVLWSLDESSKI----VAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWD 199 (370)
T ss_pred CceeeEEEcCCCCeeEEeccCceEEEEcccCcch----heeecccccccccceecccccCCCCccceEEEeCCCcEEEEE
Confidence 478899998874 778888999999998743210 111111110 111111111 1 3667778888999999
Q ss_pred CCCCcEEEEEE-ecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020 88 PKSLVVLKSFD-AHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT-YQHLQDV 141 (151)
Q Consensus 88 ~~t~~i~~~~~-~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t-~~~l~~i 141 (151)
.+|++..-+++ +|- +.|..|.+-++ .+++|+++|+.||+||++. ..+++++
T Consensus 200 ~RT~~~~~sI~dAHg---q~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el 254 (370)
T KOG1007|consen 200 LRTMKKNNSIEDAHG---QRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQEL 254 (370)
T ss_pred ccchhhhcchhhhhc---ceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccccc
Confidence 99998777766 453 47888888755 5699999999999999995 6677766
No 149
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.84 E-value=0.0046 Score=49.16 Aligned_cols=137 Identities=7% Similarity=0.101 Sum_probs=91.0
Q ss_pred CCCCceeeeeeCCCceee--eEEeCCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020 3 YPHPTPYPLNKILDTALP--PVHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~--i~~~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~ 79 (151)
..+.+.+.+.+||...|. |...++++|.=. -+|...+|+.+ +++....++.. .-=-.|..-+++||.+.
T Consensus 75 ~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~-----tl~~~~~~~y~---~EGWGLt~dg~~Li~SD 146 (264)
T PF05096_consen 75 LETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPN-----TLKKIGTFPYP---GEGWGLTSDGKRLIMSD 146 (264)
T ss_dssp TTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETT-----TTEEEEEEE-S---SS--EEEECSSCEEEE-
T ss_pred CCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccc-----cceEEEEEecC---CcceEEEcCCCEEEEEC
Confidence 456678888888876653 455566666433 34667777764 34444444442 22234555567899999
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCC--CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~--~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
| ++|+.+|+++++.++++++..+. -..++-|++.+..+|.-.=.+..|-.-|..|++....||+++-.
T Consensus 147 GS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~ 217 (264)
T PF05096_consen 147 GSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLR 217 (264)
T ss_dssp SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHH
T ss_pred CccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhh
Confidence 8 59999999999999999987432 33688899999999999999999999999999999999987643
No 150
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.84 E-value=0.0014 Score=54.25 Aligned_cols=142 Identities=18% Similarity=0.254 Sum_probs=94.2
Q ss_pred CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC------CCceEEEee-eCCEE
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP------HHSVRSLAA-VYNKV 75 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~------~~pV~~m~~-v~~~L 75 (151)
.++.+.+.+|.+|+-..-....+..-++-..||....+....+|. ......++.+. +.| .... -+..+
T Consensus 135 ~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~---~~~~~~~vf~~~~~~v~~rP--~~~~~dg~~~ 209 (352)
T TIGR02658 135 LEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGN---PKIKPTEVFHPEDEYLINHP--AYSNKSGRLV 209 (352)
T ss_pred CCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCc---eEEeeeeeecCCccccccCC--ceEcCCCcEE
Confidence 567889999999986666666666666778899999998887775 12333444221 356 2233 24679
Q ss_pred EEEeCCeEEEEe-----CCCCcEEEEEEecCC----CCCceeEEEEe--CCEEEEEE---------cCCCeEEEEeCCcc
Q psy16020 76 WCGYKNKIHVVD-----PKSLVVLKSFDAHPR----RESQVRQMTWA--GDGVWVSI---------RLDSTLRMYNAHTY 135 (151)
Q Consensus 76 w~g~~n~I~vid-----~~t~~i~~~~~~h~~----~~~~I~~m~~~--~~~vwis~---------~~d~~l~lwd~~t~ 135 (151)
|+++.++|+++| +..++....+..... ....++-+++. +..+|++. ..++.|-++|+.|.
T Consensus 210 ~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~ 289 (352)
T TIGR02658 210 WPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTG 289 (352)
T ss_pred EEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCC
Confidence 999999999999 555555554432211 01122225555 66778854 33369999999999
Q ss_pred ceeeeEeCCccccc
Q psy16020 136 QHLQDVDIEPYVSK 149 (151)
Q Consensus 136 ~~l~~idi~~~v~~ 149 (151)
+.+..|.+......
T Consensus 290 kvi~~i~vG~~~~~ 303 (352)
T TIGR02658 290 KRLRKIELGHEIDS 303 (352)
T ss_pred eEEEEEeCCCceee
Confidence 99999987765543
No 151
>KOG0322|consensus
Probab=97.83 E-value=8.2e-05 Score=58.92 Aligned_cols=112 Identities=16% Similarity=0.208 Sum_probs=82.3
Q ss_pred CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEe--CCeEEEEe
Q psy16020 14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGY--KNKIHVVD 87 (151)
Q Consensus 14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~--~n~I~vid 87 (151)
+..+|+++-|.. ++=..|.++-.++.|+.+.+ | .+..+..+++-+ .-|..+.+ .++++.+.. +++|+||+
T Consensus 204 h~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~g--slq~~~e~~lkn--pGv~gvrIRpD~KIlATAGWD~RiRVys 279 (323)
T KOG0322|consen 204 HKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTG--SLQIRKEITLKN--PGVSGVRIRPDGKILATAGWDHRIRVYS 279 (323)
T ss_pred ccCcceeeeechhhcCCcCCCccccceeeeeccccC--cccccceEEecC--CCccceEEccCCcEEeecccCCcEEEEE
Confidence 446888888753 23455666668999998743 3 233445566655 33444444 466766555 37999999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeC
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNA 132 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~ 132 (151)
-+|++.+..+.-|+. .|++++++++ ++..+++.|+.|.||+.
T Consensus 280 wrtl~pLAVLkyHsa---gvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 280 WRTLNPLAVLKYHSA---GVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred eccCCchhhhhhhhc---ceeEEEeCCCCchhhhccCCceEEeeec
Confidence 999999999999975 8999999987 88999999999999974
No 152
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.83 E-value=0.00079 Score=55.73 Aligned_cols=118 Identities=10% Similarity=-0.018 Sum_probs=78.7
Q ss_pred CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK- 80 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~- 80 (151)
..+.+.+|+-+++.. ..+...+++||++..+|.|..++...+. .|..+. +.. ....+.++.++.||++..
T Consensus 273 ~~tG~~~W~~~~~~~-~~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~-----~~~--~~~~sp~v~~g~l~v~~~~ 344 (394)
T PRK11138 273 LRSGQIVWKREYGSV-NDFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSD-----LLH--RLLTAPVLYNGYLVVGDSE 344 (394)
T ss_pred CCCCCEEEeecCCCc-cCcEEECCEEEEEcCCCeEEEEECCCCcEEEcccc-----cCC--CcccCCEEECCEEEEEeCC
Confidence 456677888776543 3456678899999999999999985432 364322 111 222333457899999985
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEe
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYN 131 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd 131 (151)
+.|+++|++|++++-+...... .........++.++ -..+|+.|..+.
T Consensus 345 G~l~~ld~~tG~~~~~~~~~~~--~~~s~P~~~~~~l~-v~t~~G~l~~~~ 392 (394)
T PRK11138 345 GYLHWINREDGRFVAQQKVDSS--GFLSEPVVADDKLL-IQARDGTVYAIT 392 (394)
T ss_pred CEEEEEECCCCCEEEEEEcCCC--cceeCCEEECCEEE-EEeCCceEEEEe
Confidence 6899999999999888876422 12223334456644 557888888765
No 153
>KOG0277|consensus
Probab=97.82 E-value=0.00011 Score=57.99 Aligned_cols=99 Identities=18% Similarity=0.262 Sum_probs=73.5
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-CCeEEEEeCCCCc-EEEEEEecCC
Q psy16020 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-KNKIHVVDPKSLV-VLKSFDAHPR 102 (151)
Q Consensus 28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid~~t~~-i~~~~~~h~~ 102 (151)
+--+.+||++.+|+...-| .+-.|+... ..|.|+.... +-|+.|. +|.|++||...++ .+..+.+|.-
T Consensus 163 fas~Sgd~~l~lwdvr~~g-----k~~~i~ah~--~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~ 235 (311)
T KOG0277|consen 163 FASASGDGTLRLWDVRSPG-----KFMSIEAHN--SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGL 235 (311)
T ss_pred EEEccCCceEEEEEecCCC-----ceeEEEecc--ceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCce
Confidence 3344568999999875333 222345544 7899998863 4466665 5789999999877 6677788864
Q ss_pred CCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccc
Q psy16020 103 RESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 103 ~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~ 136 (151)
.|..+++++. .++.|++.|-++|+||.+..+
T Consensus 236 ---AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d 268 (311)
T KOG0277|consen 236 ---AVRKVKFSPHHASLLASASYDMTVRIWDPERQD 268 (311)
T ss_pred ---EEEEEecCcchhhHhhhccccceEEecccccch
Confidence 7999999965 679999999999999998543
No 154
>KOG0642|consensus
Probab=97.79 E-value=0.00017 Score=61.82 Aligned_cols=108 Identities=16% Similarity=0.240 Sum_probs=79.9
Q ss_pred CCeEEEEecCCcEEEEEc---CCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEE------eCCC-C
Q psy16020 25 QGRVVCALADGSVAIFRR---GPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVV------DPKS-L 91 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~---~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vi------d~~t-~ 91 (151)
+..++.|..||.|-+|.. .+.+.-++++ ...+..+..||-|+.+.. .++|-|. ++.|..| |+.+ .
T Consensus 306 ep~lit~sed~~lk~WnLqk~~~s~~~~~ep--i~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~ 383 (577)
T KOG0642|consen 306 EPVLITASEDGTLKLWNLQKAKKSAEKDVEP--ILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSY 383 (577)
T ss_pred CCeEEEeccccchhhhhhcccCCccccceee--eEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCccccc
Confidence 456999999999999988 2222223332 445555679999999974 5688777 6899999 4332 2
Q ss_pred ---cEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccce
Q psy16020 92 ---VVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 92 ---~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~ 137 (151)
.+...+.+|++ .|-.+++++..- ++|++-|+++|+|.....++
T Consensus 384 dp~vl~~~l~Ghtd---avw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 384 DPSVLSGTLLGHTD---AVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred Ccchhccceecccc---ceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 35677999998 887888874433 88999999999999986555
No 155
>KOG0645|consensus
Probab=97.75 E-value=0.0025 Score=50.76 Aligned_cols=121 Identities=17% Similarity=0.316 Sum_probs=89.8
Q ss_pred CceeeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCC-
Q psy16020 16 DTALPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK- 89 (151)
Q Consensus 16 ~~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~- 89 (151)
.+|-++.. ++++|-+|.=|+++.+|... ++.|. ..-.|-.+...|.|++... +.|...+.+ .|.||...
T Consensus 62 rsVRsvAwsp~g~~La~aSFD~t~~Iw~k~-~~efe----cv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~de 136 (312)
T KOG0645|consen 62 RSVRSVAWSPHGRYLASASFDATVVIWKKE-DGEFE----CVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDE 136 (312)
T ss_pred heeeeeeecCCCcEEEEeeccceEEEeecC-CCcee----EEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecC
Confidence 46666666 56678888889999999864 44332 1335556679999999974 446555554 79999876
Q ss_pred --CCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCC---ccceeeeEeCC
Q psy16020 90 --SLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAH---TYQHLQDVDIE 144 (151)
Q Consensus 90 --t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~---t~~~l~~idi~ 144 (151)
.+++...++.|+- -|..+..-| .+++.|++.|++||+|.-. ..+++|.|+-.
T Consensus 137 ddEfec~aVL~~Htq---DVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~ 194 (312)
T KOG0645|consen 137 DDEFECIAVLQEHTQ---DVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGH 194 (312)
T ss_pred CCcEEEEeeeccccc---cccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCc
Confidence 3557788999974 688877775 4889999999999999877 57888888743
No 156
>KOG0293|consensus
Probab=97.75 E-value=0.00017 Score=60.16 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=82.3
Q ss_pred EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-C-CeEEEEeCCCCcEEEEEE
Q psy16020 22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-K-NKIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 22 ~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~-n~I~vid~~t~~i~~~~~ 98 (151)
.+.+..|+.-..|-.+.+|++.+. . ...+-.-+.||++..+.+ +++..-. . +.|+.||.+.-++.+.+.
T Consensus 363 t~Dgk~vl~v~~d~~i~l~~~e~~-----~---dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~ 434 (519)
T KOG0293|consen 363 TYDGKYVLLVTVDKKIRLYNREAR-----V---DRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYF 434 (519)
T ss_pred cCCCcEEEEEecccceeeechhhh-----h---hhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhh
Confidence 456778888889999999988521 1 111222248999999986 5566554 4 579999999999999999
Q ss_pred ecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 99 AHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 99 ~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+|+.+ ..|-.-.+.|. ..-+|+++|+.|++||-++++++.++
T Consensus 435 Ghkq~-~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L 478 (519)
T KOG0293|consen 435 GHKQG-HFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL 478 (519)
T ss_pred ccccc-ceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee
Confidence 99753 33443344433 45789999999999999999999887
No 157
>KOG2096|consensus
Probab=97.72 E-value=0.0002 Score=58.12 Aligned_cols=114 Identities=14% Similarity=0.223 Sum_probs=85.8
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC------CCCceEE-EeeeCCEEEEEeCCeEEEE
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL------PHHSVRS-LAAVYNKVWCGYKNKIHVV 86 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~------~~~pV~~-m~~v~~~Lw~g~~n~I~vi 86 (151)
++|+.+.+.++ ++....-||+..+|+.+-.-.-+ +.|+.++.|. -..|+|- |.+.++-|.++.|..+.++
T Consensus 279 saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~-qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~ 357 (420)
T KOG2096|consen 279 SAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAG-QDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVF 357 (420)
T ss_pred hheeeeeeCCCcceeEEEecCCcEEEeeccceEecC-CCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEE
Confidence 68899888765 68888889999999876211000 2455555552 1288853 3334566888889999999
Q ss_pred eCCCCcEEEEEE-ecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 87 DPKSLVVLKSFD-AHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 87 d~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
++++++.+.+++ +|+ ..|.++.++.+|-++..-.|..+++++..
T Consensus 358 ~se~g~~~~~~e~~h~---~~Is~is~~~~g~~~atcGdr~vrv~~nt 402 (420)
T KOG2096|consen 358 ASEDGKDYPELEDIHS---TTISSISYSSDGKYIATCGDRYVRVIRNT 402 (420)
T ss_pred EcccCccchhHHHhhc---CceeeEEecCCCcEEeeecceeeeeecCC
Confidence 999999999988 465 38999999999998888899999998844
No 158
>KOG1273|consensus
Probab=97.72 E-value=0.00079 Score=54.67 Aligned_cols=128 Identities=17% Similarity=0.115 Sum_probs=84.0
Q ss_pred eeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEE
Q psy16020 10 PLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIH 84 (151)
Q Consensus 10 ~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~ 84 (151)
+.+.+|. ..|+.+. +..|-+|++||.|++|+... +..-+ .++.+-.||.|+.-.. ..|-.++ +++|.
T Consensus 19 ~tld~~~-a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T-----~~iar--~lsaH~~pi~sl~WS~dgr~LltsS~D~si~ 90 (405)
T KOG1273|consen 19 HTLDNPL-AECCQFSRWGDYLAVGCANGRVVIYDFDT-----FRIAR--MLSAHVRPITSLCWSRDGRKLLTSSRDWSIK 90 (405)
T ss_pred eeccCCc-cceEEeccCcceeeeeccCCcEEEEEccc-----cchhh--hhhccccceeEEEecCCCCEeeeecCCceeE
Confidence 4456666 7888886 45799999999999998752 11111 2344459999999873 4577777 57999
Q ss_pred EEeCCCCcEEEEEE---------ecCCCCC---------cee-------------------------EEEEeCCEE-EEE
Q psy16020 85 VVDPKSLVVLKSFD---------AHPRRES---------QVR-------------------------QMTWAGDGV-WVS 120 (151)
Q Consensus 85 vid~~t~~i~~~~~---------~h~~~~~---------~I~-------------------------~m~~~~~~v-wis 120 (151)
.||...+.+.+++- -|+.... +-. +-.+...|- -++
T Consensus 91 lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIit 170 (405)
T KOG1273|consen 91 LWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIIT 170 (405)
T ss_pred EEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEE
Confidence 99999999888765 1221100 000 011111222 356
Q ss_pred EcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 121 IRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 121 ~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
+..-|.+.+||++|.+++..+-+..
T Consensus 171 GtsKGkllv~~a~t~e~vas~rits 195 (405)
T KOG1273|consen 171 GTSKGKLLVYDAETLECVASFRITS 195 (405)
T ss_pred ecCcceEEEEecchheeeeeeeech
Confidence 6667889999999999988776554
No 159
>KOG0269|consensus
Probab=97.71 E-value=0.00011 Score=65.07 Aligned_cols=103 Identities=12% Similarity=0.198 Sum_probs=79.7
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~i~~~~~~h 100 (151)
.|.++++-.||.|.+|+.+..+ .++....+..+...++++.+.. +-|--|+. +.|+.||.+.-+-..+|-+.
T Consensus 100 ~NlIAT~s~nG~i~vWdlnk~~----rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~n 175 (839)
T KOG0269|consen 100 SNLIATCSTNGVISVWDLNKSI----RNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSN 175 (839)
T ss_pred hhhheeecCCCcEEEEecCccc----cchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccccccc
Confidence 4578899999999999987422 2322223344668999999973 56777885 69999999999988888876
Q ss_pred CCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc
Q psy16020 101 PRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 101 ~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t 134 (151)
++ +|..+++++ ...+.|+.++|.|++||.+.
T Consensus 176 SE---SiRDV~fsp~~~~~F~s~~dsG~lqlWDlRq 208 (839)
T KOG0269|consen 176 SE---SIRDVKFSPGYGNKFASIHDSGYLQLWDLRQ 208 (839)
T ss_pred ch---hhhceeeccCCCceEEEecCCceEEEeeccC
Confidence 54 788888883 34599999999999999995
No 160
>KOG0292|consensus
Probab=97.71 E-value=0.00047 Score=62.20 Aligned_cols=109 Identities=15% Similarity=0.130 Sum_probs=85.6
Q ss_pred CceeeeEEeCCe-EEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe--CC-eEEEEeCCC
Q psy16020 16 DTALPPVHVQGR-VVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY--KN-KIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~~~~-v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~--~n-~I~vid~~t 90 (151)
.||--+.+++.+ +||+.+|- +|.||+.+. ....++|-.+--=||...++...=|+=+ ++ +|.|||-.|
T Consensus 52 GpVRgv~FH~~qplFVSGGDDykIkVWnYk~-------rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqs 124 (1202)
T KOG0292|consen 52 GPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT-------RRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQS 124 (1202)
T ss_pred CccceeeecCCCCeEEecCCccEEEEEeccc-------ceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccC
Confidence 588888888765 99988775 588887652 2233455444467888888887767544 44 799999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCc
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t 134 (151)
.++...+.+|. .+|-|-.+-+ +..-+|++-|-+||+||..-
T Consensus 125 r~~iavltGHn---HYVMcAqFhptEDlIVSaSLDQTVRVWDisG 166 (1202)
T KOG0292|consen 125 RKCIAVLTGHN---HYVMCAQFHPTEDLIVSASLDQTVRVWDISG 166 (1202)
T ss_pred CceEEEEecCc---eEEEeeccCCccceEEEecccceEEEEeecc
Confidence 99999999996 4888888877 67789999999999999974
No 161
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.71 E-value=0.0018 Score=56.07 Aligned_cols=143 Identities=15% Similarity=0.069 Sum_probs=89.2
Q ss_pred CCCCceeeeeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCC---CCCceEEEeeeCCEE
Q psy16020 3 YPHPTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGL---PHHSVRSLAAVYNKV 75 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~---~~~pV~~m~~v~~~L 75 (151)
+..-+..|+.++++. -..-...++.||++..+|.|..++...+ ..|..+......... ...--+.+++.+++|
T Consensus 44 v~~L~~~W~~~~g~~~g~~stPvv~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v 123 (527)
T TIGR03075 44 VKKLQPAWTFSLGKLRGQESQPLVVDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKV 123 (527)
T ss_pred hccceEEEEEECCCCCCcccCCEEECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEE
Confidence 344567788888632 1223446889999999999999987643 246543211000000 000013356678999
Q ss_pred EEEe-CCeEEEEeCCCCcEEEEEEecCC-CCCcee-EEEEeCCEEEEEEc-----CCCeEEEEeCCccceeeeEeCCc
Q psy16020 76 WCGY-KNKIHVVDPKSLVVLKSFDAHPR-RESQVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 76 w~g~-~n~I~vid~~t~~i~~~~~~h~~-~~~~I~-~m~~~~~~vwis~~-----~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
++++ +++++.+|++|+++.=++..... ....+. .-.+.++.|++..+ .++.|..+|++|++.+-..+.-|
T Consensus 124 ~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p 201 (527)
T TIGR03075 124 FFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVP 201 (527)
T ss_pred EEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcC
Confidence 9998 47999999999998876653211 011122 22233556665443 36899999999999999887654
No 162
>KOG1034|consensus
Probab=97.71 E-value=0.0006 Score=55.48 Aligned_cols=117 Identities=17% Similarity=0.175 Sum_probs=80.1
Q ss_pred ceeeeEEe------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCC-CceEEEeee---C-CEEE--EEeC
Q psy16020 17 TALPPVHV------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPH-HSVRSLAAV---Y-NKVW--CGYK 80 (151)
Q Consensus 17 ~V~~i~~~------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~-~pV~~m~~v---~-~~Lw--~g~~ 80 (151)
+|+...+. +-+||+--+...+.+|+...+| | ...++.. ++. +--+|--.- + +-+- .|+.
T Consensus 40 ~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~-~----ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~ 114 (385)
T KOG1034|consen 40 PIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDG-G----IRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL 114 (385)
T ss_pred ccceeeeehhcCCCCCceEEEeCCcEEEEEEECCcc-c----eeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce
Confidence 55555554 3357776666689999987655 1 1122211 111 223333332 1 2222 2334
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+-|+|||..++++.+.+-+|.. .|+.+...+.. ..+|++.|-.|||||.++..++.-|
T Consensus 115 GvIrVid~~~~~~~~~~~ghG~---sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~Vf 174 (385)
T KOG1034|consen 115 GVIRVIDVVSGQCSKNYRGHGG---SINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVF 174 (385)
T ss_pred eEEEEEecchhhhccceeccCc---cchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEe
Confidence 7899999999999999999975 89999998775 7899999999999999998877654
No 163
>KOG0302|consensus
Probab=97.71 E-value=0.00022 Score=58.79 Aligned_cols=96 Identities=19% Similarity=0.298 Sum_probs=67.0
Q ss_pred cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeEEEEeCCCCcEEEE--EEecCCCCCceeE
Q psy16020 36 SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHVVDPKSLVVLKS--FDAHPRRESQVRQ 109 (151)
Q Consensus 36 ~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~vid~~t~~i~~~--~~~h~~~~~~I~~ 109 (151)
.|..|.+.. |.|.++.. ++-.+..+|--+.-. ++.+.++| ++.|.|||++++.-... ..+|. +-|+.
T Consensus 235 ~I~lw~~~~-g~W~vd~~---Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~---sDVNV 307 (440)
T KOG0302|consen 235 GIHLWEPST-GSWKVDQR---PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHN---SDVNV 307 (440)
T ss_pred ceEeeeecc-CceeecCc---cccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccC---Cceee
Confidence 466676655 88977643 222245777766664 46677655 67999999999842222 26674 37888
Q ss_pred EEEeCC-EEEEEEcCCCeEEEEeCCcccee
Q psy16020 110 MTWAGD-GVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 110 m~~~~~-~vwis~~~d~~l~lwd~~t~~~l 138 (151)
+.+.+. ..++|+++++++++||.++++.-
T Consensus 308 ISWnr~~~lLasG~DdGt~~iwDLR~~~~~ 337 (440)
T KOG0302|consen 308 ISWNRREPLLASGGDDGTLSIWDLRQFKSG 337 (440)
T ss_pred EEccCCcceeeecCCCceEEEEEhhhccCC
Confidence 888744 45899999999999999986544
No 164
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.69 E-value=0.0098 Score=47.85 Aligned_cols=136 Identities=10% Similarity=0.110 Sum_probs=85.1
Q ss_pred ceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-CeEE-
Q psy16020 7 TPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIH- 84 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~I~- 84 (151)
+.+++.+++.+|++|...++++.+|. ++.|.+|++..+.. .......+....+.+|...++.+++|.- ..|.
T Consensus 80 ~~i~~~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~-----l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~ 153 (321)
T PF03178_consen 80 KLIHSTEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKT-----LLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSL 153 (321)
T ss_dssp EEEEEEEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSS-----EEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEEeecCcceEhhhhCCEEEEee-cCEEEEEEccCccc-----chhhheecceEEEEEEeccccEEEEEEcccCEEE
Confidence 45667788999999999999966666 89999999864320 1111222223688899999999999984 3444
Q ss_pred -EEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCC-----------ccceeeeEeCCcccccc
Q psy16020 85 -VVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAH-----------TYQHLQDVDIEPYVSKM 150 (151)
Q Consensus 85 -vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~-----------t~~~l~~idi~~~v~~~ 150 (151)
-|+.+..+.. .+.-... ...+.++.+. .....+.++.++.|.++... ..+....+.+...++++
T Consensus 154 ~~~~~~~~~l~-~va~d~~-~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~ 230 (321)
T PF03178_consen 154 LRYDEENNKLI-LVARDYQ-PRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSF 230 (321)
T ss_dssp EEEETTTE-EE-EEEEESS--BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEE
T ss_pred EEEEccCCEEE-EEEecCC-CccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceE
Confidence 4576443332 2221211 2357777776 22368899999998887765 34455666666666554
No 165
>KOG2048|consensus
Probab=97.66 E-value=0.00052 Score=59.97 Aligned_cols=81 Identities=16% Similarity=0.264 Sum_probs=70.6
Q ss_pred CceEEEeeeC--CEEEEEeC-CeEEEEeCCC-CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020 63 HSVRSLAAVY--NKVWCGYK-NKIHVVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 63 ~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l 138 (151)
++|+||+++. ++|.+|-. +.|-+||+.. .-.+..+++++| +.|..+++++++=+.|.+-++.|.-||..+++++
T Consensus 26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~d--rsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~ 103 (691)
T KOG2048|consen 26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPED--RSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQK 103 (691)
T ss_pred cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCC--CceeeEEEccCCeEEeecCCceEEEEecccCcee
Confidence 9999999984 77888874 6999999885 567888888876 7999999997777889999999999999999999
Q ss_pred eeEeCCc
Q psy16020 139 QDVDIEP 145 (151)
Q Consensus 139 ~~idi~~ 145 (151)
..+|+..
T Consensus 104 ~~~d~~g 110 (691)
T KOG2048|consen 104 YNIDSNG 110 (691)
T ss_pred EEecCCC
Confidence 9988643
No 166
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.66 E-value=0.0048 Score=46.60 Aligned_cols=120 Identities=9% Similarity=0.185 Sum_probs=84.2
Q ss_pred eeeeeCC--CceeeeEEeCC--e--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-
Q psy16020 9 YPLNKIL--DTALPPVHVQG--R--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY- 79 (151)
Q Consensus 9 l~~i~l~--~~V~~i~~~~~--~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~- 79 (151)
...+++. .+|.++...++ + +..|-.++.+.+|+.. ......++. .+++.+... ++.|.+|.
T Consensus 51 ~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~--------~~~i~~~~~--~~~n~i~wsP~G~~l~~~g~ 120 (194)
T PF08662_consen 51 VESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK--------GKKIFSFGT--QPRNTISWSPDGRFLVLAGF 120 (194)
T ss_pred cceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc--------ccEeEeecC--CCceEEEECCCCCEEEEEEc
Confidence 4555665 47999998764 3 2334456789998763 223456665 788888876 35555543
Q ss_pred C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE-EEc------CCCeEEEEeCCccceeeeEeCC
Q psy16020 80 K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV-SIR------LDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 80 ~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~------~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+ +.|.+||.++++...+++ |. .++.+..+++|-++ +.. .|+-+++|+.. ++++.+.++.
T Consensus 121 ~n~~G~l~~wd~~~~~~i~~~~-~~----~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~~~~ 189 (194)
T PF08662_consen 121 GNLNGDLEFWDVRKKKKISTFE-HS----DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKKPFD 189 (194)
T ss_pred cCCCcEEEEEECCCCEEeeccc-cC----cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEecchh
Confidence 4 359999999999988887 43 57899999887633 222 37889999985 8899888764
No 167
>KOG2444|consensus
Probab=97.65 E-value=0.00025 Score=55.02 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=77.6
Q ss_pred EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16020 22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLVVLKSF 97 (151)
Q Consensus 22 ~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~i~~~~ 97 (151)
.-....+++|.++|.|.+|.++-.|. .-..+..+. ++|-||.+.. +..|+|++ ++|+.++++=.+.+...
T Consensus 67 ~~~~~~~~vG~~dg~v~~~n~n~~g~----~~d~~~s~~--e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~ 140 (238)
T KOG2444|consen 67 VTASAKLMVGTSDGAVYVFNWNLEGA----HSDRVCSGE--ESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV 140 (238)
T ss_pred cccCceEEeecccceEEEecCCccch----HHHhhhccc--ccceeccccccccceeEEeccCCceeeeccccCceeeee
Confidence 33456899999999999998752221 112344555 9999999984 37999997 58999999988888888
Q ss_pred EecCCCCCceeEEEEeCCEEEEEE--cCCCeEEEEeCCccc
Q psy16020 98 DAHPRRESQVRQMTWAGDGVWVSI--RLDSTLRMYNAHTYQ 136 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~~~~vwis~--~~d~~l~lwd~~t~~ 136 (151)
-.|+. +.-...++..++.+..+. +.|..++.|+....+
T Consensus 141 g~h~~-~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~ 180 (238)
T KOG2444|consen 141 GQHNF-ESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK 180 (238)
T ss_pred ccccC-CCcceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence 77763 333444444455555555 789999999988543
No 168
>KOG0307|consensus
Probab=97.64 E-value=0.00025 Score=64.75 Aligned_cols=126 Identities=19% Similarity=0.277 Sum_probs=89.6
Q ss_pred CCCceeeeEEeC---CeEEEEecCCcEEEEEcCC----------------------------------CC---CCCCCcc
Q psy16020 14 ILDTALPPVHVQ---GRVVCALADGSVAIFRRGP----------------------------------DG---QWDLSKY 53 (151)
Q Consensus 14 l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~----------------------------------~~---~wd~~~~ 53 (151)
.+.+|..|.++. |-+-.|..||+|.+|+.++ .| .||+..-
T Consensus 115 h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~ 194 (1049)
T KOG0307|consen 115 HTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKK 194 (1049)
T ss_pred cCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCC
Confidence 457888887753 3455556679999998873 11 3666533
Q ss_pred -eEEEeCCCCCceEE--Eeee---CCEEEEEeCC----eEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCE--EEEE
Q psy16020 54 -HTVTLGLPHHSVRS--LAAV---YNKVWCGYKN----KIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG--VWVS 120 (151)
Q Consensus 54 -~~i~l~~~~~pV~~--m~~v---~~~Lw~g~~n----~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis 120 (151)
..|++++...-.+| +.-+ ..+||++++. .|..||.+ .....+.+++|.. .|.+|.+++.+ .++|
T Consensus 195 ~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~---GilslsWc~~D~~lllS 271 (1049)
T KOG0307|consen 195 KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQR---GILSLSWCPQDPRLLLS 271 (1049)
T ss_pred CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhccccc---ceeeeccCCCCchhhhc
Confidence 35566652221222 2222 2679999962 59999976 4557788899975 89999999554 5899
Q ss_pred EcCCCeEEEEeCCccceeeeEe
Q psy16020 121 IRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 121 ~~~d~~l~lwd~~t~~~l~~id 142 (151)
++.|+.+.+|+.+|+|.+.++-
T Consensus 272 sgkD~~ii~wN~~tgEvl~~~p 293 (1049)
T KOG0307|consen 272 SGKDNRIICWNPNTGEVLGELP 293 (1049)
T ss_pred ccCCCCeeEecCCCceEeeecC
Confidence 9999999999999999999884
No 169
>KOG0268|consensus
Probab=97.64 E-value=0.00035 Score=57.43 Aligned_cols=133 Identities=13% Similarity=0.134 Sum_probs=90.6
Q ss_pred CceeeeeeCC-CceeeeEEeCC--eEEEEe-cCCcEEEEEcCC--------------CCCCCCCcceEEEeCC-------
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQG--RVVCAL-ADGSVAIFRRGP--------------DGQWDLSKYHTVTLGL------- 60 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~~--~v~vgl-~nG~l~v~~~~~--------------~~~wd~~~~~~i~l~~------- 60 (151)
..++.+++.. |+|.++.+++. .++++. +|+.|.+|+... .-+|+. +-..+..++
T Consensus 177 ~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP-eafnF~~a~ED~nlY~ 255 (433)
T KOG0268|consen 177 DNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNP-EAFNFVAANEDHNLYT 255 (433)
T ss_pred CCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCc-cccceeecccccccee
Confidence 3467777877 89999999765 355555 899999998752 235765 322333222
Q ss_pred ---------------CCCceEEEeee--CCEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEE
Q psy16020 61 ---------------PHHSVRSLAAV--YNKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSI 121 (151)
Q Consensus 61 ---------------~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~ 121 (151)
+-+.|..+.+. +.++..|+ +.+|.||...-++- +.. -|+...+.|.++.++-+.- -+|+
T Consensus 256 ~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S-Rdi-YhtkRMq~V~~Vk~S~Dskyi~SG 333 (433)
T KOG0268|consen 256 YDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS-RDI-YHTKRMQHVFCVKYSMDSKYIISG 333 (433)
T ss_pred hhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc-hhh-hhHhhhheeeEEEEeccccEEEec
Confidence 12345555554 45555555 66899998775543 222 2666788999999996654 6899
Q ss_pred cCCCeEEEEeCCccceeeeE
Q psy16020 122 RLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 122 ~~d~~l~lwd~~t~~~l~~i 141 (151)
++|+.||||-+.-.+.+.-+
T Consensus 334 Sdd~nvRlWka~Aseklgv~ 353 (433)
T KOG0268|consen 334 SDDGNVRLWKAKASEKLGVI 353 (433)
T ss_pred CCCcceeeeecchhhhcCCC
Confidence 99999999999877766554
No 170
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.64 E-value=0.0019 Score=55.29 Aligned_cols=141 Identities=14% Similarity=0.084 Sum_probs=86.5
Q ss_pred CCCceeeeeeCCC---ceeeeEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEE
Q psy16020 4 PHPTPYPLNKILD---TALPPVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCG 78 (151)
Q Consensus 4 ~~~~~l~~i~l~~---~V~~i~~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g 78 (151)
...+..|+.++++ .-..-...+++||++.++|.|..++...+ ..|..+......-..+...-+...+.+ ++++++
T Consensus 37 ~~~~~~W~~~~~~~~~~~~sPvv~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~ 116 (488)
T cd00216 37 KKLKVAWTFSTGDERGQEGTPLVVDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFG 116 (488)
T ss_pred hcceeeEEEECCCCCCcccCCEEECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEe
Confidence 4466788888762 12233567889999999999999987542 257554321100000000111233446 899999
Q ss_pred eC-CeEEEEeCCCCcEEEEEEecCCC--CCce-eEEEEeCCEEEEEE--------cCCCeEEEEeCCccceeeeEeCC
Q psy16020 79 YK-NKIHVVDPKSLVVLKSFDAHPRR--ESQV-RQMTWAGDGVWVSI--------RLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~~~h~~~--~~~I-~~m~~~~~~vwis~--------~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+. +.|+.+|++|++.+=+++..... ...+ ....+.+.-+.+.. ..++.|..+|+.|++.+-..+..
T Consensus 117 ~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~ 194 (488)
T cd00216 117 TFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTT 194 (488)
T ss_pred cCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeecc
Confidence 85 69999999999998887754320 0001 11122233333322 24688999999999999988764
No 171
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.63 E-value=0.0033 Score=50.57 Aligned_cols=125 Identities=14% Similarity=0.154 Sum_probs=86.3
Q ss_pred CCCceeeeeeCCC--ceeeeEEe---------CCeEEEEec---------C-CcEEEEEcCCCC--CCCCCcceEEEeCC
Q psy16020 4 PHPTPYPLNKILD--TALPPVHV---------QGRVVCALA---------D-GSVAIFRRGPDG--QWDLSKYHTVTLGL 60 (151)
Q Consensus 4 ~~~~~l~~i~l~~--~V~~i~~~---------~~~v~vgl~---------n-G~l~v~~~~~~~--~wd~~~~~~i~l~~ 60 (151)
.+.+.+.++.|++ .|.++... ..++.||++ . |.|.+|+....+ .+.++.....++
T Consensus 10 ~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~-- 87 (321)
T PF03178_consen 10 TTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEV-- 87 (321)
T ss_dssp TTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEE--
T ss_pred CCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEee--
Confidence 3566788888884 77777553 246888887 2 999999987531 122222222333
Q ss_pred CCCceEEEeeeCCEEEEEeCCeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCe-EEEEeCC
Q psy16020 61 PHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDST-LRMYNAH 133 (151)
Q Consensus 61 ~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~-l~lwd~~ 133 (151)
+.||++|...+++|.+|.|++|++++.+..+ +.+.-..+.. ..+.+|...++-++++-..++. +.-|+..
T Consensus 88 -~g~V~ai~~~~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~--~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~ 159 (321)
T PF03178_consen 88 -KGPVTAICSFNGRLVVAVGNKLYVYDLDNSKTLLKKAFYDSP--FYITSLSVFKNYILVGDAMKSVSLLRYDEE 159 (321)
T ss_dssp -SS-EEEEEEETTEEEEEETTEEEEEEEETTSSEEEEEEE-BS--SSEEEEEEETTEEEEEESSSSEEEEEEETT
T ss_pred -cCcceEhhhhCCEEEEeecCEEEEEEccCcccchhhheecce--EEEEEEeccccEEEEEEcccCEEEEEEEcc
Confidence 3899999999999999999999999988777 6655554433 3899999999988877766655 3446653
No 172
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.58 E-value=0.0053 Score=48.81 Aligned_cols=117 Identities=12% Similarity=0.135 Sum_probs=75.5
Q ss_pred CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCce---EEEeeeCCEEEEEeC--
Q psy16020 6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV---RSLAAVYNKVWCGYK-- 80 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV---~~m~~v~~~Lw~g~~-- 80 (151)
-+.+.+++.+..==-|++.+++++++-+...|..++.. +++..+.+++.+...|| +-|..+++.|||-..
T Consensus 120 l~~~~~~~y~~EGWGLt~dg~~Li~SDGS~~L~~~dP~-----~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~t 194 (264)
T PF05096_consen 120 LKKIGTFPYPGEGWGLTSDGKRLIMSDGSSRLYFLDPE-----TFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQT 194 (264)
T ss_dssp TEEEEEEE-SSS--EEEECSSCEEEE-SSSEEEEE-TT-----T-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTS
T ss_pred ceEEEEEecCCcceEEEcCCCEEEEECCccceEEECCc-----ccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCC
Confidence 44555555555444556777788887766677776643 56677777775433555 557778999999996
Q ss_pred CeEEEEeCCCCcEEEEEEecC------------CCCCceeEEEEe--CCEEEEEEcCCCeE
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHP------------RRESQVRQMTWA--GDGVWVSIRLDSTL 127 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~------------~~~~~I~~m~~~--~~~vwis~~~d~~l 127 (151)
+.|.+||++||+++..+.... ....-.+-+++. ++..|+++.+=+.+
T Consensus 195 d~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~Wp~l 255 (264)
T PF05096_consen 195 DRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLWPKL 255 (264)
T ss_dssp SEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-SEE
T ss_pred CeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCCCce
Confidence 799999999999999886321 113468999995 66789999875554
No 173
>KOG0290|consensus
Probab=97.57 E-value=0.0014 Score=52.70 Aligned_cols=124 Identities=13% Similarity=0.139 Sum_probs=82.7
Q ss_pred CCCceeeeEEeCCeE-----EEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCCCceEEEeeeC---CEEEEEe-CC
Q psy16020 14 ILDTALPPVHVQGRV-----VCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPHHSVRSLAAVY---NKVWCGY-KN 81 (151)
Q Consensus 14 l~~~V~~i~~~~~~v-----~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~~pV~~m~~v~---~~Lw~g~-~n 81 (151)
+|=+++.|.+.+... ..|.++-.|.+|+...+.. ++.....+... ....|+++..-.+ +.+=.++ +-
T Consensus 95 ~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee~-~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDT 173 (364)
T KOG0290|consen 95 HPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEES-RVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDT 173 (364)
T ss_pred CCCCccceEecCCccccCcchhhcccCeEEEEeccCcCC-ceehhhhhccCcccccCCcccccccccCCcceeEeecccC
Confidence 344566666655431 2344466899998864211 11111111111 1238898888764 3344444 45
Q ss_pred eEEEEeCCCC---cEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 82 KIHVVDPKSL---VVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 82 ~I~vid~~t~---~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+-.|||.+++ .++.++-+|- ..|+.+++.. .+++.|++.|+.+|+||.+..+|-..|
T Consensus 174 TCTiWdie~~~~~~vkTQLIAHD---KEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTII 235 (364)
T KOG0290|consen 174 TCTIWDIETGVSGTVKTQLIAHD---KEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTII 235 (364)
T ss_pred eEEEEEEeeccccceeeEEEecC---cceeEEEeccCccceEEEecCCCcEEEEEecccccceEE
Confidence 7889999985 4688899994 5899999996 577999999999999999998887666
No 174
>KOG0639|consensus
Probab=97.57 E-value=0.00014 Score=61.96 Aligned_cols=103 Identities=16% Similarity=0.269 Sum_probs=77.9
Q ss_pred eeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCCCCcEEE
Q psy16020 20 PPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPKSLVVLK 95 (151)
Q Consensus 20 ~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~t~~i~~ 95 (151)
+|.-..+-.|..++||.|+||+.. +...+ ++..+.--+.|+.+. +.+||.|- +|.|+.||..++.-..
T Consensus 516 a~spDakvcFsccsdGnI~vwDLh--------nq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlq 587 (705)
T KOG0639|consen 516 AISPDAKVCFSCCSDGNIAVWDLH--------NQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQ 587 (705)
T ss_pred hcCCccceeeeeccCCcEEEEEcc--------cceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhh
Confidence 333345679999999999999775 32232 454556788999998 57899987 7999999998776433
Q ss_pred EEEecCCCCCceeEEEEeCCEEEEEEcC-CCeEEEEeCCc
Q psy16020 96 SFDAHPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHT 134 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~-d~~l~lwd~~t 134 (151)
+ | ++.++|+.+-+++.+=|++.+- .+.+.+-|+..
T Consensus 588 q---h-dF~SQIfSLg~cP~~dWlavGMens~vevlh~sk 623 (705)
T KOG0639|consen 588 Q---H-DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSK 623 (705)
T ss_pred h---h-hhhhhheecccCCCccceeeecccCcEEEEecCC
Confidence 2 3 4567999999999988887764 67788888875
No 175
>KOG3914|consensus
Probab=97.51 E-value=0.0012 Score=54.62 Aligned_cols=133 Identities=17% Similarity=0.112 Sum_probs=86.8
Q ss_pred eeeeeeCCCceeeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe--CCe
Q psy16020 8 PYPLNKILDTALPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY--KNK 82 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~--~n~ 82 (151)
++....+|...+.|.+ .+..+.++..-|.+.-|+..+...|. ....+|. -+-+.-+++.. ++.-+-+ +.+
T Consensus 100 l~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~----~~~~lGh-vSml~dVavS~D~~~IitaDRDEk 174 (390)
T KOG3914|consen 100 LLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR----CEPILGH-VSMLLDVAVSPDDQFIITADRDEK 174 (390)
T ss_pred eeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC----cchhhhh-hhhhheeeecCCCCEEEEecCCce
Confidence 3333345544444433 23467777777776666653322121 2223443 25556666653 4444444 358
Q ss_pred EEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020 83 IHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 148 (151)
Q Consensus 83 I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~ 148 (151)
|.|.... +.-++.-+-+|+. -|..|.+..+..++|++.|++|++||.++++.|.+.|.+....
T Consensus 175 IRvs~ypa~f~IesfclGH~e---FVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L~t~dl~s~~~ 238 (390)
T KOG3914|consen 175 IRVSRYPATFVIESFCLGHKE---FVSTISLTDNYLLLSGSGDKTLRLWDITSGKLLDTCDLSSLVI 238 (390)
T ss_pred EEEEecCcccchhhhccccHh---heeeeeeccCceeeecCCCCcEEEEecccCCcccccchhHhhh
Confidence 9888754 5666666667986 8999999988888899999999999999999999998776544
No 176
>KOG0321|consensus
Probab=97.49 E-value=0.0013 Score=57.50 Aligned_cols=126 Identities=12% Similarity=0.077 Sum_probs=81.3
Q ss_pred eeCCCceeeeEEeCCe-EEEEec-CCcEEEEEcCCCCC-CCCCcceEEEeCCC---CCceEEEee--eCCEEEEEe-CCe
Q psy16020 12 NKILDTALPPVHVQGR-VVCALA-DGSVAIFRRGPDGQ-WDLSKYHTVTLGLP---HHSVRSLAA--VYNKVWCGY-KNK 82 (151)
Q Consensus 12 i~l~~~V~~i~~~~~~-v~vgl~-nG~l~v~~~~~~~~-wd~~~~~~i~l~~~---~~pV~~m~~--v~~~Lw~g~-~n~ 82 (151)
-.+.++|+.+.+-++. |..+.+ ||.|.||+....-+ -..+.....++..+ ..-+.|+.. .+.+|++.| +|+
T Consensus 215 ~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~s 294 (720)
T KOG0321|consen 215 NTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNS 294 (720)
T ss_pred CceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCc
Confidence 3344567777776554 444444 99999998863211 00111111122211 134555555 358899999 689
Q ss_pred EEEEeCCCCc--EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce
Q psy16020 83 IHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 83 I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
||.||..++. ....|.++.+..-.|..+..-.+.-.+|++-|...++|.+.+.+.
T Consensus 295 Iy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~ 351 (720)
T KOG0321|consen 295 IYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEA 351 (720)
T ss_pred EEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccC
Confidence 9999999876 566677777655567776654444488999999999999987654
No 177
>KOG2111|consensus
Probab=97.48 E-value=0.0057 Score=49.59 Aligned_cols=112 Identities=10% Similarity=0.167 Sum_probs=77.7
Q ss_pred ceeeeEEeCCe---EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE-EEEEeC-C-eEEEEeCC
Q psy16020 17 TALPPVHVQGR---VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWCGYK-N-KIHVVDPK 89 (151)
Q Consensus 17 ~V~~i~~~~~~---v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~-Lw~g~~-n-~I~vid~~ 89 (151)
-.-++.+..+. +|=|.--|+|-+.+...... ..|..|+-.+ ++|.||++. .+. |..|+. + -|+|||++
T Consensus 138 GlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~---~~p~~I~AH~--s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~ 212 (346)
T KOG2111|consen 138 GLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKP---NAPSIINAHD--SDIACVALNLQGTLVATASTKGTLIRIFDTE 212 (346)
T ss_pred ceEeecCCCCceEEEcCCCccceEEEEEhhhcCc---CCceEEEccc--CceeEEEEcCCccEEEEeccCcEEEEEEEcC
Confidence 34444444332 44456667777777653211 1456666655 999999997 344 555553 4 59999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCEEEEEE-cCCCeEEEEeCCc
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHT 134 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~-~~d~~l~lwd~~t 134 (151)
+++..++|.-..+ ...|.+|+++++..|++. ++-++|.+|-.+.
T Consensus 213 ~g~~l~E~RRG~d-~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 213 DGTLLQELRRGVD-RADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CCcEeeeeecCCc-hheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 9999999875443 357999999999987665 4568999998774
No 178
>KOG0321|consensus
Probab=97.47 E-value=0.00039 Score=60.55 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=71.1
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCCCCcEEEE--EEecC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSLVVLKS--FDAHP 101 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~t~~i~~~--~~~h~ 101 (151)
.+|+|..+|.|..|+...... .++......---+..-|.-+.-+. .+|--++|+ +|+.||.++.++... +-+|+
T Consensus 66 iLavadE~G~i~l~dt~~~~f-r~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~ 144 (720)
T KOG0321|consen 66 ILAVADEDGGIILFDTKSIVF-RLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHT 144 (720)
T ss_pred eEEEecCCCceeeecchhhhc-chhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccc
Confidence 499999999999998763210 111110000001124444444442 456667776 799999999988877 88998
Q ss_pred CCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCc
Q psy16020 102 RRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 102 ~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t 134 (151)
. +|..+++. +..|++++++|+.+.|||.+-
T Consensus 145 ~---SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 145 G---SVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred c---ccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence 5 66666665 568899999999999999984
No 179
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.47 E-value=0.022 Score=45.72 Aligned_cols=124 Identities=12% Similarity=0.130 Sum_probs=73.5
Q ss_pred ceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEE--eCCCCCceEEEeeeC--CEEEEEeC--CeEEEEe
Q psy16020 17 TALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVT--LGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVD 87 (151)
Q Consensus 17 ~V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~--l~~~~~pV~~m~~v~--~~Lw~g~~--n~I~vid 87 (151)
.+.++...+ +++|++. .++.|.+|+...+|.........+. .|. . .+.|.+.. ..||+++. |+|.+||
T Consensus 127 ~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~--~-p~~~~~~pdg~~lyv~~~~~~~v~v~~ 203 (330)
T PRK11028 127 GCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGA--G-PRHMVFHPNQQYAYCVNELNSSVDVWQ 203 (330)
T ss_pred cccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCC--C-CceEEECCCCCEEEEEecCCCEEEEEE
Confidence 345554443 4787655 4589999998765532211112222 333 3 46777764 47999984 7899999
Q ss_pred CC--CC--cEEEEEEecCCC---CCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc----cceeeeEeC
Q psy16020 88 PK--SL--VVLKSFDAHPRR---ESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT----YQHLQDVDI 143 (151)
Q Consensus 88 ~~--t~--~i~~~~~~h~~~---~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t----~~~l~~idi 143 (151)
.+ ++ +..+++..++.. ......|.++++ .++++.+.++.|.+||..+ .+..+.+..
T Consensus 204 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~ 272 (330)
T PRK11028 204 LKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT 272 (330)
T ss_pred EeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec
Confidence 76 33 445555543321 122335666655 4577777899999999743 344555543
No 180
>KOG4547|consensus
Probab=97.43 E-value=0.0031 Score=54.28 Aligned_cols=106 Identities=11% Similarity=0.144 Sum_probs=81.8
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRR 103 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~ 103 (151)
.+.-|..+|.|..|+..+++ ....+.-+.+..+|+++.-.. +.+|-+.+ .++..|+.++.++.+.+.+.+.
T Consensus 72 ~lvlgt~~g~v~~ys~~~g~-----it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~- 145 (541)
T KOG4547|consen 72 MLVLGTPQGSVLLYSVAGGE-----ITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKP- 145 (541)
T ss_pred EEEeecCCccEEEEEecCCe-----EEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCC-
Confidence 47778889999999986543 223344455569999988654 45664444 5899999999999999998875
Q ss_pred CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 104 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 104 ~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.+..++.+++| =+...-+..|++||.++.|.++.+
T Consensus 146 --~~~sl~is~D~-~~l~~as~~ik~~~~~~kevv~~f 180 (541)
T KOG4547|consen 146 --LVSSLCISPDG-KILLTASRQIKVLDIETKEVVITF 180 (541)
T ss_pred --ccceEEEcCCC-CEEEeccceEEEEEccCceEEEEe
Confidence 78888999885 345556789999999999999887
No 181
>KOG1275|consensus
Probab=97.42 E-value=0.00093 Score=60.43 Aligned_cols=105 Identities=14% Similarity=0.305 Sum_probs=79.2
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRES 105 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~ 105 (151)
.+..|.---.++.|+.+. ....+...++. ..|.=|-..+..+.||.. ++|.+-|+++.+.+++|.+|++
T Consensus 149 ~~i~Gg~Q~~li~~Dl~~-----~~e~r~~~v~a--~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~--- 218 (1118)
T KOG1275|consen 149 TLIMGGLQEKLIHIDLNT-----EKETRTTNVSA--SGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG--- 218 (1118)
T ss_pred ceeecchhhheeeeeccc-----ceeeeeeeccC--CceEEEEecCcEEEeecccceEEeecCCcCceeeeeecccc---
Confidence 344443344677777652 23444556665 447777778888999995 7999999999999999999987
Q ss_pred ceeEEEEeCCEEEEEEcC---------CCeEEEEeCCccceeeeEe
Q psy16020 106 QVRQMTWAGDGVWVSIRL---------DSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 106 ~I~~m~~~~~~vwis~~~---------d~~l~lwd~~t~~~l~~id 142 (151)
+|..+.+.|+- ++||+- |+.|++||.+..+.+.-|.
T Consensus 219 siSDfDv~GNl-LitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~ 263 (1118)
T KOG1275|consen 219 SISDFDVQGNL-LITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ 263 (1118)
T ss_pred ceeeeeccCCe-EEEeecccccccccccchhhhhhhhhhhccCCcc
Confidence 89999987776 666654 7789999999988877664
No 182
>KOG1408|consensus
Probab=97.42 E-value=0.0025 Score=56.72 Aligned_cols=121 Identities=20% Similarity=0.241 Sum_probs=84.7
Q ss_pred CCceeeeEEeCC----eEEEEecCCcEEEEEcC---CCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEE
Q psy16020 15 LDTALPPVHVQG----RVVCALADGSVAIFRRG---PDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIH 84 (151)
Q Consensus 15 ~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~---~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~ 84 (151)
.++|+++++..+ +.+...||-.| .|+.. .+|. +-...+-.++. ..+.-|.+-. +.+..+|.+ +|.
T Consensus 547 SssITsvKFa~~gln~~MiscGADksi-mFr~~qk~~~g~--~f~r~t~t~~k--tTlYDm~Vdp~~k~v~t~cQDrnir 621 (1080)
T KOG1408|consen 547 SSSITSVKFACNGLNRKMISCGADKSI-MFRVNQKASSGR--LFPRHTQTLSK--TTLYDMAVDPTSKLVVTVCQDRNIR 621 (1080)
T ss_pred ccceeEEEEeecCCceEEEeccCchhh-heehhccccCce--ecccccccccc--ceEEEeeeCCCcceEEEEecccceE
Confidence 468888888533 46666666543 33322 2231 11111223333 6777777743 678899976 799
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEc-CCCeEEEEeCCccceeee
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~-~d~~l~lwd~~t~~~l~~ 140 (151)
|||+++++..++|.+..+.+...--+..++.|++++++ .|-+|.+||--++|++..
T Consensus 622 if~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~ 678 (1080)
T KOG1408|consen 622 IFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQ 678 (1080)
T ss_pred EEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhh
Confidence 99999999999999987776777777888999976665 588999999999998764
No 183
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=97.40 E-value=0.017 Score=47.40 Aligned_cols=135 Identities=15% Similarity=0.102 Sum_probs=89.5
Q ss_pred CCCCceeeeeeCCC----ceee--eEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcce-EEEeCCCCCceEEEeeeCCE
Q psy16020 3 YPHPTPYPLNKILD----TALP--PVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYH-TVTLGLPHHSVRSLAAVYNK 74 (151)
Q Consensus 3 ~~~~~~l~~i~l~~----~V~~--i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~-~i~l~~~~~pV~~m~~v~~~ 74 (151)
..+.+.+|+.++.. .... ..+.++.+|++..+|.|..++..... .|...... .-.++ .|+. ..+++
T Consensus 40 ~~~g~~~W~~~~~~~~~~~~~~~~~~~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~---~~~~---~~~G~ 113 (370)
T COG1520 40 NTSGTLLWSVSLGSGGGGIYAGPAPADGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLS---GPIL---GSDGK 113 (370)
T ss_pred ccCcceeeeeecccCccceEeccccEeeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceecc---CceE---EeCCe
Confidence 44566777765442 2222 36678899999999999999876544 47554332 11221 3322 22788
Q ss_pred EEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 75 VWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 75 Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
||+|..+ ++|++|+++++.+-++.... ..............||... .++.+...|..|++..-+.+..+
T Consensus 114 i~~g~~~g~~y~ld~~~G~~~W~~~~~~-~~~~~~~~v~~~~~v~~~s-~~g~~~al~~~tG~~~W~~~~~~ 183 (370)
T COG1520 114 IYVGSWDGKLYALDASTGTLVWSRNVGG-SPYYASPPVVGDGTVYVGT-DDGHLYALNADTGTLKWTYETPA 183 (370)
T ss_pred EEEecccceEEEEECCCCcEEEEEecCC-CeEEecCcEEcCcEEEEec-CCCeEEEEEccCCcEEEEEecCC
Confidence 9999976 59999999999988888775 1112233333344444333 88999999999999988877654
No 184
>KOG1538|consensus
Probab=97.40 E-value=0.0005 Score=60.55 Aligned_cols=68 Identities=18% Similarity=0.293 Sum_probs=61.3
Q ss_pred CceEEEeee--CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020 63 HSVRSLAAV--YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH 133 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~ 133 (151)
+.|..+++. +.+|-.+.|++++++|+..|...+++.+|.| .|.|++++.+|- +.|++.|-.+.+|...
T Consensus 13 hci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKD---tVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 13 HCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKD---TVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred cchheeEECCCCceEEEecCCEEEEEeCCCcccccccccccc---eEEEEEEccCCceeccCCCceeEEEeccc
Confidence 466677775 4789999999999999999999999999998 999999998877 9999999999999876
No 185
>KOG4328|consensus
Probab=97.40 E-value=0.00074 Score=56.84 Aligned_cols=108 Identities=16% Similarity=0.217 Sum_probs=78.5
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CCeEEEEeCCCCcEEEE--EE
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKIHVVDPKSLVVLKS--FD 98 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I~vid~~t~~i~~~--~~ 98 (151)
+..|+.|.--|...+|++..+|. +...+.+.. ..|+.|+++. ..+.+.+ +....|||++.+.-+++ +.
T Consensus 291 ~~~vl~~~~~G~f~~iD~R~~~s----~~~~~~lh~--kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~ls 364 (498)
T KOG4328|consen 291 SRSVLFGDNVGNFNVIDLRTDGS----EYENLRLHK--KKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLS 364 (498)
T ss_pred CccEEEeecccceEEEEeecCCc----cchhhhhhh--cccceeecCCCCchheeecccCcceeeeehhhhcCCCCccee
Confidence 44577777678888888876663 344556655 7899999874 4444444 46899999998887665 22
Q ss_pred --ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeC----CccceeeeE
Q psy16020 99 --AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNA----HTYQHLQDV 141 (151)
Q Consensus 99 --~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~----~t~~~l~~i 141 (151)
.|. .+|+...+++.+- +++...|+.||+||. ...+++.+|
T Consensus 365 t~~Hr---rsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I 411 (498)
T KOG4328|consen 365 TLPHR---RSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTI 411 (498)
T ss_pred ccccc---ceeeeeEEcCCCCceEeeccCCceEEeecccccccCCcccee
Confidence 354 4899999986544 889999999999999 456666666
No 186
>KOG0270|consensus
Probab=97.38 E-value=0.0063 Score=51.14 Aligned_cols=122 Identities=11% Similarity=0.075 Sum_probs=87.8
Q ss_pred CCCCceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEE
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKV 75 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~L 75 (151)
.++.+|-.++... +.|.++.+++. .+..|..||++++++...-+ ......++- .-|-.++.. ++..
T Consensus 273 ~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~----~s~~~wk~~---g~VEkv~w~~~se~~f 345 (463)
T KOG0270|consen 273 VDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPS----NSGKEWKFD---GEVEKVAWDPHSENSF 345 (463)
T ss_pred cCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcc----ccCceEEec---cceEEEEecCCCceeE
Confidence 3566777888744 79999988754 68999999999999875211 111222332 334444442 2456
Q ss_pred EEEeC-CeEEEEeCCCC-cEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020 76 WCGYK-NKIHVVDPKSL-VVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~-~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t 134 (151)
.||.+ +.+|=+|++.. +...++.+|.+ .|..+.+.+. +...+.+.|.+++||+..-
T Consensus 346 ~~~tddG~v~~~D~R~~~~~vwt~~AHd~---~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~ 405 (463)
T KOG0270|consen 346 FVSTDDGTVYYFDIRNPGKPVWTLKAHDD---EISGLSVNIQTPGLLSTASTDKVVKLWKFDV 405 (463)
T ss_pred EEecCCceEEeeecCCCCCceeEEEeccC---CcceEEecCCCCcceeeccccceEEEEeecC
Confidence 67775 69999999965 89999999965 8888888743 6688999999999999873
No 187
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=97.38 E-value=0.0077 Score=54.48 Aligned_cols=142 Identities=12% Similarity=0.107 Sum_probs=84.6
Q ss_pred CCCCceeeeeeCCCce-----------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEee
Q psy16020 3 YPHPTPYPLNKILDTA-----------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA 70 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V-----------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~ 70 (151)
+..-+..|+.+..+.. ..-...++.||++..+|.|..++...+. .|.++......-+......|.+.+
T Consensus 161 V~~L~~aWt~~tGd~~~~~~~~~~~~e~TPlvvgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay 240 (764)
T TIGR03074 161 VGNLKVAWTYHTGDLKTPDDPGEATFQATPLKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSY 240 (764)
T ss_pred ccCceEEEEEECCCccccccccccccccCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEE
Confidence 4455667777665421 1123358899999999999999976433 475543221111000011222333
Q ss_pred ------------------eCCEEEEEe-CCeEEEEeCCCCcEEEEEEecCC------------CCCceeE-EEEeCCEEE
Q psy16020 71 ------------------VYNKVWCGY-KNKIHVVDPKSLVVLKSFDAHPR------------RESQVRQ-MTWAGDGVW 118 (151)
Q Consensus 71 ------------------v~~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~------------~~~~I~~-m~~~~~~vw 118 (151)
.+++|+.+. +++++.+|++|++..-.|..... ..-.++. -.+.++.|.
T Consensus 241 ~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VI 320 (764)
T TIGR03074 241 YDAPAAAAGPAAPAAPADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVV 320 (764)
T ss_pred ecCCcccccccccccccccCCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEE
Confidence 235899887 56999999999999887753210 0000111 122244555
Q ss_pred EEEc---------CCCeEEEEeCCccceeeeEeCC
Q psy16020 119 VSIR---------LDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 119 is~~---------~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+..+ -++.|+-+|++|++++-..+..
T Consensus 321 vG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~g 355 (764)
T TIGR03074 321 IGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPG 355 (764)
T ss_pred EEecccccccccCCCcEEEEEECCCCcEeeEEecC
Confidence 4322 2789999999999999999864
No 188
>KOG1517|consensus
Probab=97.37 E-value=0.0026 Score=58.52 Aligned_cols=117 Identities=15% Similarity=0.143 Sum_probs=82.9
Q ss_pred CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC---CCce---EEEee----eCCEEEEEeCC
Q psy16020 16 DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP---HHSV---RSLAA----VYNKVWCGYKN 81 (151)
Q Consensus 16 ~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~---~~pV---~~m~~----v~~~Lw~g~~n 81 (151)
..|.+|.+.++ -+.+|..||.|.||+.-.++ | +.++.++--.+ ..|. ..|++ -.+.|.++.+.
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~-~--~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~ 1186 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADK-W--KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDV 1186 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEecccccc-c--CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCe
Confidence 47888888765 39999999999999865443 3 34554432110 1111 11222 14789988875
Q ss_pred -eEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccce
Q psy16020 82 -KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 82 -~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
.|.|||++.-++.+.+...++ ..|+.|..+ +.++.+++-.||.||+||.+.-.+
T Consensus 1187 r~IRIWDa~~E~~~~diP~~s~--t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ 1243 (1387)
T KOG1517|consen 1187 RSIRIWDAHKEQVVADIPYGSS--TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPP 1243 (1387)
T ss_pred eEEEEEecccceeEeecccCCC--ccceeecccccCCceEEEeecCCceEEeecccCCc
Confidence 599999999999888886654 689988776 446788999999999999996444
No 189
>KOG2055|consensus
Probab=97.31 E-value=0.0052 Score=51.97 Aligned_cols=104 Identities=9% Similarity=0.102 Sum_probs=71.6
Q ss_pred eEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16020 21 PVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSF 97 (151)
Q Consensus 21 i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~ 97 (151)
+.+..+.+..++-+|.|.+-.-.. + +....+++. ..|+.+.+. +.+||+.|+ +.|+|||.+..+++++|
T Consensus 311 VShd~~fia~~G~~G~I~lLhakT-~----eli~s~Kie---G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf 382 (514)
T KOG2055|consen 311 VSHDSNFIAIAGNNGHIHLLHAKT-K----ELITSFKIE---GVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRF 382 (514)
T ss_pred ecCCCCeEEEcccCceEEeehhhh-h----hhhheeeec---cEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEE
Confidence 345566777777789888876532 1 122344553 677788775 356998886 69999999999999999
Q ss_pred EecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020 98 DAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t 134 (151)
...- .-.=++++.+.++- +.++++++.|.+||-.+
T Consensus 383 ~D~G--~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 383 VDDG--SVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred eecC--ccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 8542 12334455554544 67788899999999553
No 190
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.27 E-value=0.056 Score=42.13 Aligned_cols=126 Identities=7% Similarity=0.044 Sum_probs=81.7
Q ss_pred ceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC----------CCCceEEEeeeCCEEE
Q psy16020 7 TPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL----------PHHSVRSLAAVYNKVW 76 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~----------~~~pV~~m~~v~~~Lw 76 (151)
+.++++.+|+.+.+|.+.++.+++|..+| ..+++...+..- .....++ ...|+....+.++++-
T Consensus 130 ~~~ke~~lp~~~~~i~~~~~~i~v~~~~~-f~~idl~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~L 203 (275)
T PF00780_consen 130 KLLKEISLPDPPSSIAFLGNKICVGTSKG-FYLIDLNTGSPS-----ELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFL 203 (275)
T ss_pred ceeEEEEcCCCcEEEEEeCCEEEEEeCCc-eEEEecCCCCce-----EEeCccCCcchhhhcccCCCceEEEEeCCceEE
Confidence 67899999999999999999999999554 677776532211 1111111 1145544444556666
Q ss_pred EEeCCeEEEEeCCCCcEEE--EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 77 CGYKNKIHVVDPKSLVVLK--SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 77 ~g~~n~I~vid~~t~~i~~--~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
..+++.-..+|. .|+..+ +++= ...+..+++....+. .+.. ..|.+|+..+++++|.|+...
T Consensus 204 l~~~~~g~fv~~-~G~~~r~~~i~W----~~~p~~~~~~~pyli-~~~~-~~iEV~~~~~~~lvQ~i~~~~ 267 (275)
T PF00780_consen 204 LCYDNIGVFVNK-NGEPSRKSTIQW----SSAPQSVAYSSPYLI-AFSS-NSIEVRSLETGELVQTIPLPN 267 (275)
T ss_pred EEecceEEEEcC-CCCcCcccEEEc----CCchhEEEEECCEEE-EECC-CEEEEEECcCCcEEEEEECCC
Confidence 666665445554 455444 2321 136677777777644 4544 459999999999999998654
No 191
>KOG1009|consensus
Probab=97.27 E-value=0.0069 Score=50.47 Aligned_cols=126 Identities=17% Similarity=0.231 Sum_probs=88.9
Q ss_pred CCCceeeeEEeCC---eEEEEecCCcEEEEEcCCC--CCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe--CCeEEE
Q psy16020 14 ILDTALPPVHVQG---RVVCALADGSVAIFRRGPD--GQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY--KNKIHV 85 (151)
Q Consensus 14 l~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~--~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~--~n~I~v 85 (151)
-+.+|.++.+.+| ++..|++|-.|.+|....+ +.=+.+.-..=.|+.+...|+++-+.. +.|-+++ ++.|++
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l 91 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL 91 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence 3468888888655 6788888889999977532 110111111224566679999999974 4454444 357888
Q ss_pred EeCC--------C--------CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 86 VDPK--------S--------LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 86 id~~--------t--------~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
|-.. + ..+.+.+-+|.+ -|..+..++++- .++.+-|+.+++||+.+++.++..|
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~---diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~ 162 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRD---DIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILD 162 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEeccccc---chhhhhccCCCceeeeeeccceEEEEEeccceeEeecc
Confidence 8654 3 456667777754 688888887766 7899999999999999999988775
No 192
>KOG1274|consensus
Probab=97.25 E-value=0.0055 Score=55.36 Aligned_cols=104 Identities=17% Similarity=0.216 Sum_probs=80.3
Q ss_pred EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe-CCeEEEEeCCCCc---EEEEE
Q psy16020 22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY-KNKIHVVDPKSLV---VLKSF 97 (151)
Q Consensus 22 ~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~I~vid~~t~~---i~~~~ 97 (151)
...++.++++.+||.|.+|.-.. |.+.|..+.... .+|.+++...+++-.|+ +|.|.++.-.+++ ++.+|
T Consensus 22 d~~gefi~tcgsdg~ir~~~~~s----d~e~P~ti~~~g--~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rf 95 (933)
T KOG1274|consen 22 DPDGEFICTCGSDGDIRKWKTNS----DEEEPETIDISG--ELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARF 95 (933)
T ss_pred cCCCCEEEEecCCCceEEeecCC----cccCCchhhccC--ceeEEEeecccceEEeeccceEEEeeCCCCCccceeeee
Confidence 33566899999999999998764 337888888544 89999999998888888 4789888877766 44555
Q ss_pred EecCCCCCceeEEEEeCCEEEE-EEcCCCeEEEEeCCccce
Q psy16020 98 DAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~~~~vwi-s~~~d~~l~lwd~~t~~~ 137 (151)
+ -++++++++++|-|+ .++.|-.|++-+..+...
T Consensus 96 t------lp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~ 130 (933)
T KOG1274|consen 96 T------LPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQ 130 (933)
T ss_pred e------ccceEEEEecCCcEEEeecCceeEEEEeccccch
Confidence 5 378999999998865 556678888888775443
No 193
>KOG4378|consensus
Probab=97.24 E-value=0.0014 Score=56.05 Aligned_cols=106 Identities=10% Similarity=0.053 Sum_probs=78.4
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC--EEEEEe-CCeEEEEeCCCCcEEEEEEecCCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGY-KNKIHVVDPKSLVVLKSFDAHPRR 103 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~--~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~ 103 (151)
++..|..+|.|.+|+..+ ...+-.+-+++..|+||.+..+ .|..++ |+-|.|.++.|++--.+|. |. .
T Consensus 93 y~~sgG~~~~Vkiwdl~~-------kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~-~~-s 163 (673)
T KOG4378|consen 93 YEISGGQSGCVKIWDLRA-------KLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFT-ID-S 163 (673)
T ss_pred eeeccCcCceeeehhhHH-------HHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccccee-cC-C
Confidence 567777788888876542 1122356677899999999853 465555 5789999999999888888 43 2
Q ss_pred CCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 104 ESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 104 ~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.+.|..+.++.. ..+.+.++++.+.|||+..-.+....
T Consensus 164 gqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~ 203 (673)
T KOG4378|consen 164 GQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHA 203 (673)
T ss_pred CCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccch
Confidence 467889998855 45889999999999999876555443
No 194
>KOG0974|consensus
Probab=97.24 E-value=0.0044 Score=56.44 Aligned_cols=110 Identities=12% Similarity=0.099 Sum_probs=76.2
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeee---CCEEEEEeC---CeEEEEeCCCCcEEEEE
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAV---YNKVWCGYK---NKIHVVDPKSLVVLKSF 97 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v---~~~Lw~g~~---n~I~vid~~t~~i~~~~ 97 (151)
++++++++.+..+.+++.+ +.|- ..++. +...+.-++... .+++++++| |.|++|++.--..-..+
T Consensus 99 ~k~i~l~~~~ns~~i~d~~--~~~~-----~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l 171 (967)
T KOG0974|consen 99 NKKIALVTSRNSLLIRDSK--NSSV-----LSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRL 171 (967)
T ss_pred cceEEEEEcCceEEEEecc--cCce-----ehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCccee
Confidence 4578888888889998865 2221 11222 112444555554 478888887 78999998822222257
Q ss_pred EecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 98 DAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.+|.. .|+.|..+.+| ..+|+++|.++|+|+..+.+.+.--.+.
T Consensus 172 ~GHeG---~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fg 216 (967)
T KOG0974|consen 172 KGHEG---SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFG 216 (967)
T ss_pred cccCC---ceEEEEEccCCcEEEEEecCcceeeeecccccccCccccc
Confidence 88964 99999997544 4889999999999999998877643333
No 195
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.23 E-value=0.0077 Score=45.47 Aligned_cols=97 Identities=16% Similarity=0.310 Sum_probs=66.4
Q ss_pred CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeE
Q psy16020 35 GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQ 109 (151)
Q Consensus 35 G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~ 109 (151)
|...+|..+..+ .+...+++.. ..||..+.-. ++++.+.+| .+|.+||.+ ++...+|.. .+++.
T Consensus 37 ~~~~l~~~~~~~----~~~~~i~l~~-~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~-----~~~n~ 105 (194)
T PF08662_consen 37 GEFELFYLNEKN----IPVESIELKK-EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGT-----QPRNT 105 (194)
T ss_pred eeEEEEEEecCC----CccceeeccC-CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecC-----CCceE
Confidence 556777764322 2335566654 3689999886 467766654 479999997 555566652 37789
Q ss_pred EEEeCCEEEEEE-c---CCCeEEEEeCCccceeeeEe
Q psy16020 110 MTWAGDGVWVSI-R---LDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 110 m~~~~~~vwis~-~---~d~~l~lwd~~t~~~l~~id 142 (151)
+.+++.|-++.. + -.+.|++||.++.+.+.+.+
T Consensus 106 i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~ 142 (194)
T PF08662_consen 106 ISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE 142 (194)
T ss_pred EEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc
Confidence 999977754333 2 24679999999999988874
No 196
>KOG1517|consensus
Probab=97.21 E-value=0.0082 Score=55.42 Aligned_cols=119 Identities=14% Similarity=0.124 Sum_probs=77.6
Q ss_pred ceeeeE---EeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe---CCCCCceEEEeee--C-CEEEEEeC-CeEEEE
Q psy16020 17 TALPPV---HVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAV--Y-NKVWCGYK-NKIHVV 86 (151)
Q Consensus 17 ~V~~i~---~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l---~~~~~pV~~m~~v--~-~~Lw~g~~-n~I~vi 86 (151)
.|++|. .++|.+.+|.+||.|.+|++.-... + ..+.. +...+||..+.+- + ++|..||. +.|+++
T Consensus 1210 ~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~---d--s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~ 1284 (1387)
T KOG1517|consen 1210 LVTALSADLVHGNIIAAGFADGSVRVYDRRMAPP---D--SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLL 1284 (1387)
T ss_pred cceeecccccCCceEEEeecCCceEEeecccCCc---c--ccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEE
Confidence 455553 2468899999999999999863211 1 12222 2223557666664 2 57999995 699999
Q ss_pred eCCCCcEEEE--EEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 87 DPKSLVVLKS--FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 87 d~~t~~i~~~--~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|++.-..+.. +..|-+-++..++|.+-...=.++++....|++|+.. ++.+..|
T Consensus 1285 DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ikIy~~~-G~~l~~~ 1340 (1387)
T KOG1517|consen 1285 DLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLIKIYSLS-GEQLNII 1340 (1387)
T ss_pred ecccCcccccceeeeccccCccceeeeeccCCCeeeecCcceEEEEecC-hhhhccc
Confidence 9986332222 3334333345888888766555666666999999998 6666655
No 197
>KOG0290|consensus
Probab=97.20 E-value=0.0066 Score=48.92 Aligned_cols=110 Identities=17% Similarity=0.240 Sum_probs=76.8
Q ss_pred CceeeeEEeC--CeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeeeC-CE----EEEEeCCeEEE
Q psy16020 16 DTALPPVHVQ--GRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAVY-NK----VWCGYKNKIHV 85 (151)
Q Consensus 16 ~~V~~i~~~~--~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v~-~~----Lw~g~~n~I~v 85 (151)
..|++|.+.+ -++|++ .+||++.+|+... ++. ..|-..+ +..|.-.+.-.. +- ..+.-.++|.+
T Consensus 197 KEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~-----leH-STIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~i 270 (364)
T KOG0290|consen 197 KEVYDIAFLKGSRDVFASVGADGSVRMFDLRS-----LEH-STIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVI 270 (364)
T ss_pred cceeEEEeccCccceEEEecCCCcEEEEEecc-----ccc-ceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEE
Confidence 5899999987 468876 4699999999862 221 2222222 125555555443 11 12233578999
Q ss_pred EeCCC-CcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020 86 VDPKS-LVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 86 id~~t-~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t 134 (151)
+|.+. .....++..|.. .|+.++..+. ...+|+++|...-+||..+
T Consensus 271 LDiR~P~tpva~L~~H~a---~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 271 LDIRVPCTPVARLRNHQA---SVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred EEecCCCcceehhhcCcc---cccceEecCCCCceeeecCCcceEEEEeccc
Confidence 99885 568888999974 8999999854 4488999999999999985
No 198
>KOG1407|consensus
Probab=97.16 E-value=0.011 Score=46.97 Aligned_cols=74 Identities=15% Similarity=0.239 Sum_probs=56.4
Q ss_pred eEEEeee-CCEEE-EEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeee
Q psy16020 65 VRSLAAV-YNKVW-CGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 65 V~~m~~v-~~~Lw-~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~ 140 (151)
++-+... .+.++ .-.| +.|.|+.=.+++.++++.+|+. .-.|+++++.|- +.+++-|+.+.|||+...-++..
T Consensus 150 ~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s---nCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~ 226 (313)
T KOG1407|consen 150 VNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS---NCICIEFDPDGRYFATGSADALVSLWDVDELICERC 226 (313)
T ss_pred eeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCc---ceEEEEECCCCceEeeccccceeeccChhHhhhhee
Confidence 3444443 45555 4457 6899998889999999999973 677888888887 78888999999999997655554
Q ss_pred E
Q psy16020 141 V 141 (151)
Q Consensus 141 i 141 (151)
|
T Consensus 227 i 227 (313)
T KOG1407|consen 227 I 227 (313)
T ss_pred e
Confidence 4
No 199
>KOG0303|consensus
Probab=97.10 E-value=0.0072 Score=50.40 Aligned_cols=120 Identities=18% Similarity=0.266 Sum_probs=80.7
Q ss_pred CceeeeEEeC-------------CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC
Q psy16020 16 DTALPPVHVQ-------------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK 80 (151)
Q Consensus 16 ~~V~~i~~~~-------------~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~ 80 (151)
.+|.+|..+. |-++.+.+|.++.+|+...+. ..+.+. ++--|.+|.+. ++.+..+|.
T Consensus 122 epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tge-------ali~l~-hpd~i~S~sfn~dGs~l~Ttck 193 (472)
T KOG0303|consen 122 EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGE-------ALITLD-HPDMVYSMSFNRDGSLLCTTCK 193 (472)
T ss_pred cceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCc-------eeeecC-CCCeEEEEEeccCCceeeeecc
Confidence 4666665553 346677778888888765322 355666 34778888886 467888887
Q ss_pred C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEc----CCCeEEEEeCCccc---eeeeEeCCc
Q psy16020 81 N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIR----LDSTLRMYNAHTYQ---HLQDVDIEP 145 (151)
Q Consensus 81 n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~----~d~~l~lwd~~t~~---~l~~idi~~ 145 (151)
+ +|.|||+.+++++..-.+|.- ..-....+.++|-..+.+ .+..+-|||....+ -++++|-+.
T Consensus 194 DKkvRv~dpr~~~~v~e~~~heG--~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSn 264 (472)
T KOG0303|consen 194 DKKVRVIDPRRGTVVSEGVAHEG--AKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSN 264 (472)
T ss_pred cceeEEEcCCCCcEeeecccccC--CCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCC
Confidence 5 799999999999999888863 233334445555544443 46789999998643 345555443
No 200
>KOG2321|consensus
Probab=97.05 E-value=0.01 Score=51.57 Aligned_cols=124 Identities=11% Similarity=0.125 Sum_probs=89.1
Q ss_pred eeeeeCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeE
Q psy16020 9 YPLNKILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKI 83 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I 83 (151)
-..+++|..=.+|+|+.- -+|+|.+.-.|.-|.. ..|+| =. .+.+-. .+++++.+.+ +-|.||. .+.|
T Consensus 127 hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNL-EqGrf--L~--P~~~~~--~~lN~v~in~~hgLla~Gt~~g~V 199 (703)
T KOG2321|consen 127 HYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNL-EQGRF--LN--PFETDS--GELNVVSINEEHGLLACGTEDGVV 199 (703)
T ss_pred eeeeecCcCCccccccCCCccEEEeecCcceEEEEc-ccccc--cc--cccccc--ccceeeeecCccceEEecccCceE
Confidence 346788888888888643 4888887666666654 34544 12 223323 7888888875 5577777 5799
Q ss_pred EEEeCCCCcEEEEEEecCC--------CCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceee
Q psy16020 84 HVVDPKSLVVLKSFDAHPR--------RESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 84 ~vid~~t~~i~~~~~~h~~--------~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~ 139 (151)
-.||+.+.+...++++-+. ....|+++.+.++|+ ..-+..++.+.+||.++.+++.
T Consensus 200 EfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~ 264 (703)
T KOG2321|consen 200 EFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLL 264 (703)
T ss_pred EEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCcee
Confidence 9999999998888875432 233599999999899 5566678999999999987764
No 201
>KOG1034|consensus
Probab=97.03 E-value=0.0067 Score=49.51 Aligned_cols=107 Identities=12% Similarity=0.144 Sum_probs=75.0
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEE---e
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLVVLKSFD---A 99 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~i~~~~~---~ 99 (151)
.+-+|+.-|.|.|++..+... ....+.. ...|+.+-... +-|-+|+. ..|.+||.++..+...|- +
T Consensus 107 ~la~~G~~GvIrVid~~~~~~----~~~~~gh---G~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~eg 179 (385)
T KOG1034|consen 107 FLAAGGYLGVIRVIDVVSGQC----SKNYRGH---GGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEG 179 (385)
T ss_pred eEEeecceeEEEEEecchhhh----ccceecc---CccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEeccccc
Confidence 455666678999998753211 1112222 36777777764 23556665 489999999999888765 6
Q ss_pred cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 100 HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 100 h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
|.+ .|-.+.++++|- .+|++-|-.|++|+..+.+.-..|..
T Consensus 180 Hrd---eVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~ 221 (385)
T KOG1034|consen 180 HRD---EVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLEL 221 (385)
T ss_pred ccC---cEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhh
Confidence 765 899999987766 88999999999999996555554443
No 202
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.01 E-value=0.022 Score=48.76 Aligned_cols=107 Identities=19% Similarity=0.109 Sum_probs=69.0
Q ss_pred eEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEEE-------------------eCCeEEEE
Q psy16020 27 RVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG-------------------YKNKIHVV 86 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g-------------------~~n~I~vi 86 (151)
.||+|..+|.|..+++..+. .|..+.. ... +....+.++++ ..++++.+
T Consensus 303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~----~~~-------~~~~~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~Al 371 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTGKLISARPEV----EQP-------MAYDPGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAAL 371 (488)
T ss_pred EEEEECCCceEEEEECCCCcEeeEeEee----ccc-------cccCCceEEEccccccccCcccccCCCCCCCceEEEEE
Confidence 59999999999999986533 3643221 000 11112445543 24689999
Q ss_pred eCCCCcEEEEEEecCCC-------CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 87 DPKSLVVLKSFDAHPRR-------ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 87 d~~t~~i~~~~~~h~~~-------~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
|++|++++=+....... ...-..++..++. .+.++.|+.|+.+|+.|++.+.+.++..
T Consensus 372 D~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~-v~~g~~dG~l~ald~~tG~~lW~~~~~~ 436 (488)
T cd00216 372 DPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNL-VFAGAADGYFRAFDATTGKELWKFRTPS 436 (488)
T ss_pred eCCCCcEeeEeeCCccccccccCCcccCcceEecCCe-EEEECCCCeEEEEECCCCceeeEEECCC
Confidence 99999977666643110 0111234555554 4466789999999999999999998743
No 203
>KOG2110|consensus
Probab=97.00 E-value=0.018 Score=47.57 Aligned_cols=96 Identities=14% Similarity=0.156 Sum_probs=74.0
Q ss_pred cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-C-eEEEEeCCCCcEEEEEEecCCCCCcee
Q psy16020 33 ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-N-KIHVVDPKSLVVLKSFDAHPRRESQVR 108 (151)
Q Consensus 33 ~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n-~I~vid~~t~~i~~~~~~h~~~~~~I~ 108 (151)
..|.|.+|+.. ++.+...|.. ++.|+-||++. +..|..|++ + -|+||+..+++-..+|--... ...|.
T Consensus 151 t~GdV~l~d~~-----nl~~v~~I~a--H~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~-~~~Iy 222 (391)
T KOG2110|consen 151 TSGDVVLFDTI-----NLQPVNTINA--HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY-PVSIY 222 (391)
T ss_pred CCceEEEEEcc-----cceeeeEEEe--cCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce-eeEEE
Confidence 35889999865 5555556664 44999999997 355888885 4 599999999999999984443 45799
Q ss_pred EEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020 109 QMTWAGDGV-WVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 109 ~m~~~~~~v-wis~~~d~~l~lwd~~t~~ 136 (151)
.++++.++- +.+.++..+|++|-.++-.
T Consensus 223 SL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 223 SLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred EEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 999997766 6777888999999887543
No 204
>KOG1963|consensus
Probab=96.99 E-value=0.013 Score=52.68 Aligned_cols=121 Identities=10% Similarity=0.147 Sum_probs=89.6
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC-CEEEEEe--CCeEEEEeCC
Q psy16020 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY-NKVWCGY--KNKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~-~~Lw~g~--~n~I~vid~~ 89 (151)
+.|.+|.+. +.+||.|+..|-++.|+...++ ++.+ ++| +||..+.+.+ +.+++-+ +|+|+++.+.
T Consensus 252 ~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~------kqfLPRLg---s~I~~i~vS~ds~~~sl~~~DNqI~li~~~ 322 (792)
T KOG1963|consen 252 DEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK------KQFLPRLG---SPILHIVVSPDSDLYSLVLEDNQIHLIKAS 322 (792)
T ss_pred cccceeEEecCCceEeecccceEEEEEeecCCC------cccccccC---CeeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence 788888775 5589999999999999875322 2333 455 7999988874 5566554 6899999999
Q ss_pred CCcEEEEEEecCCC--------CCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 90 SLVVLKSFDAHPRR--------ESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 90 t~~i~~~~~~h~~~--------~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
++.++.++.+-... .+-.+.+.+++ .+..+-..+.+.|++||.-+-+.+.++++..
T Consensus 323 dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~ 387 (792)
T KOG1963|consen 323 DLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCD 387 (792)
T ss_pred chhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEe
Confidence 99999998864322 22344555554 5567778899999999999988888776643
No 205
>KOG1272|consensus
Probab=96.95 E-value=0.0012 Score=55.85 Aligned_cols=119 Identities=9% Similarity=0.141 Sum_probs=82.1
Q ss_pred CCCCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEE
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCG 78 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g 78 (151)
+|+.+.+.++... ..+..|..++- -+-+|.+||+|..|+.++ ..| .+++-.+..||+++++-. ++.-+.
T Consensus 238 VS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~s------keP-LvKiLcH~g~V~siAv~~~G~YMaT 310 (545)
T KOG1272|consen 238 VSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNS------KEP-LVKILCHRGPVSSIAVDRGGRYMAT 310 (545)
T ss_pred echhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCC------cch-HHHHHhcCCCcceEEECCCCcEEee
Confidence 5666777777776 46666666553 367788999999998753 232 223333459999999974 554443
Q ss_pred e--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 79 Y--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 79 ~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
. ++++.|||..++.-..+... + -....+.++..| .++++..+.+.+|--.
T Consensus 311 tG~Dr~~kIWDlR~~~ql~t~~t-p---~~a~~ls~Sqkg-lLA~~~G~~v~iw~d~ 362 (545)
T KOG1272|consen 311 TGLDRKVKIWDLRNFYQLHTYRT-P---HPASNLSLSQKG-LLALSYGDHVQIWKDA 362 (545)
T ss_pred cccccceeEeeeccccccceeec-C---CCcccccccccc-ceeeecCCeeeeehhh
Confidence 3 47899999998875555443 1 267788888788 5689999999999543
No 206
>KOG1587|consensus
Probab=96.94 E-value=0.0076 Score=52.63 Aligned_cols=123 Identities=13% Similarity=0.116 Sum_probs=86.0
Q ss_pred CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCC----CcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEE
Q psy16020 16 DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDL----SKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHV 85 (151)
Q Consensus 16 ~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~----~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~v 85 (151)
-.++++.+. +++.+||...|.|..=.|.. ..-.. +.+.....+. .||+++..+. -.+..++|+ .+.+
T Consensus 348 ~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g-~~~~~~~~~~~~~~~~~h~--g~v~~v~~nPF~~k~fls~gDW~vri 424 (555)
T KOG1587|consen 348 VGATSLKFEPTDPNHFIVGTEEGKVYKGCRKG-YTPAPEVSYKGHSTFITHI--GPVYAVSRNPFYPKNFLSVGDWTVRI 424 (555)
T ss_pred cceeeEeeccCCCceEEEEcCCcEEEEEeccC-CcccccccccccccccccC--cceEeeecCCCccceeeeeccceeEe
Confidence 366777774 56899999999988854531 11011 1111233444 9999999985 556666654 8999
Q ss_pred EeCC-CCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc--cceeeeEeCC
Q psy16020 86 VDPK-SLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT--YQHLQDVDIE 144 (151)
Q Consensus 86 id~~-t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t--~~~l~~idi~ 144 (151)
|..+ .....-.++-+.+ +|+.+++++ ..|+++.+.+|.|.+||... .++...+.+.
T Consensus 425 Ws~~~~~~Pl~~~~~~~~---~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~ 485 (555)
T KOG1587|consen 425 WSEDVIASPLLSLDSSPD---YVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVC 485 (555)
T ss_pred ccccCCCCcchhhhhccc---eeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccccc
Confidence 9887 5667777776765 799999994 47899999999999999873 6666665433
No 207
>KOG2919|consensus
Probab=96.90 E-value=0.019 Score=46.98 Aligned_cols=112 Identities=17% Similarity=0.298 Sum_probs=78.3
Q ss_pred ceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe---CCCCCceEEEeeeC---CEEEEEe-CCeEEEEe
Q psy16020 17 TALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAVY---NKVWCGY-KNKIHVVD 87 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l---~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid 87 (151)
+..||.+. +.++|+|- +-.|.||+...-|+ +......+.- |- ..=|.|+++.. +.+.+|+ ++++=+++
T Consensus 160 aAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr-~c~vy~t~~~~k~gq-~giisc~a~sP~~~~~~a~gsY~q~~giy~ 236 (406)
T KOG2919|consen 160 AAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGR-DCPVYTTVTKGKFGQ-KGIISCFAFSPMDSKTLAVGSYGQRVGIYN 236 (406)
T ss_pred hheeEEecCCCCeEeecc-cceEEEeeccCCCC-CCcchhhhhcccccc-cceeeeeeccCCCCcceeeecccceeeeEe
Confidence 45666665 34899998 88999999865454 3333333322 21 24456777753 3566665 77888887
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t 134 (151)
-..+.....+-+|.. .|+++.+.++| .+.-.+.|..|..||.+.
T Consensus 237 ~~~~~pl~llggh~g---GvThL~~~edGn~lfsGaRk~dkIl~WDiR~ 282 (406)
T KOG2919|consen 237 DDGRRPLQLLGGHGG---GVTHLQWCEDGNKLFSGARKDDKILCWDIRY 282 (406)
T ss_pred cCCCCceeeecccCC---CeeeEEeccCcCeecccccCCCeEEEEeehh
Confidence 788888888889975 89999999554 455556699999999984
No 208
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=96.82 E-value=0.055 Score=41.78 Aligned_cols=98 Identities=24% Similarity=0.277 Sum_probs=70.4
Q ss_pred cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C-EEEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCcee
Q psy16020 33 ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N-KVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVR 108 (151)
Q Consensus 33 ~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~-~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~ 108 (151)
.+|.+.+|+... .......+..+...|+++.+.. + .+..+. ++.+.+|+..+......+..|.. .|.
T Consensus 132 ~d~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~ 202 (466)
T COG2319 132 LDGTVKLWDLST------PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTD---PVS 202 (466)
T ss_pred CCccEEEEEecC------CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCC---ceE
Confidence 367788877642 0112223333458889888875 3 344443 56899999999999999998865 899
Q ss_pred EEEEeCCE--EEEEEcCCCeEEEEeCCccceee
Q psy16020 109 QMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 109 ~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
++.+.+.+ ..++.+.|+.+++||..+.+.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~ 235 (466)
T COG2319 203 SLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLR 235 (466)
T ss_pred EEEEcCCcceEEEEecCCCcEEEEECCCCcEEe
Confidence 99988776 45555899999999988777766
No 209
>KOG4283|consensus
Probab=96.80 E-value=0.044 Score=44.46 Aligned_cols=90 Identities=17% Similarity=0.116 Sum_probs=60.9
Q ss_pred CCCCceeeeeeCC-CceeeeEEeCCe---EEEEecCCcEEEEEcCC-CCCC---CCCc---ceEEEeCC-CCCceEEEee
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQGR---VVCALADGSVAIFRRGP-DGQW---DLSK---YHTVTLGL-PHHSVRSLAA 70 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~~~---v~vgl~nG~l~v~~~~~-~~~w---d~~~---~~~i~l~~-~~~pV~~m~~ 70 (151)
+.+..|-|.++=+ +-|++....+.. ++.|.+||.+..|+... .|+. |..+ |..++-.. +...|+.++.
T Consensus 175 i~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~ 254 (397)
T KOG4283|consen 175 IASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAW 254 (397)
T ss_pred ccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeee
Confidence 4566677777644 889999887764 88899999999998752 2321 2222 22233111 2377888888
Q ss_pred eC--CEEE-EEeCCeEEEEeCCCCc
Q psy16020 71 VY--NKVW-CGYKNKIHVVDPKSLV 92 (151)
Q Consensus 71 v~--~~Lw-~g~~n~I~vid~~t~~ 92 (151)
.. .++| ||.++++.+|+.++|.
T Consensus 255 tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 255 TSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred cccchhhhhccCccceEEeecccCc
Confidence 63 5566 7778999999999876
No 210
>KOG1240|consensus
Probab=96.79 E-value=0.019 Score=53.69 Aligned_cols=123 Identities=13% Similarity=0.087 Sum_probs=88.6
Q ss_pred ceeeeeeCC---CceeeeEEeCC--eEEEEecCCcEEEEEcC---CCCCCCCCcceEEEeCCCCCceEEEeee--C---C
Q psy16020 7 TPYPLNKIL---DTALPPVHVQG--RVVCALADGSVAIFRRG---PDGQWDLSKYHTVTLGLPHHSVRSLAAV--Y---N 73 (151)
Q Consensus 7 ~~l~~i~l~---~~V~~i~~~~~--~v~vgl~nG~l~v~~~~---~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~---~ 73 (151)
..+|++|.+ ..|++++-.+. -+.+|.+.|.+..|+.. .-..| +.+ ...|++.|... . .
T Consensus 1184 ~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw--------~~P-~~~~i~~v~~~~~~~~~S 1254 (1431)
T KOG1240|consen 1184 HDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSW--------EHP-ARAPIRHVWLCPTYPQES 1254 (1431)
T ss_pred hhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecc--------cCc-ccCCcceEEeeccCCCCc
Confidence 456777766 68999988654 58899999999999864 11123 222 13777777764 1 1
Q ss_pred -EEEEEe-C-CeEEEEeCCCCcEEEEEEec-----------------CCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 74 -KVWCGY-K-NKIHVVDPKSLVVLKSFDAH-----------------PRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 74 -~Lw~g~-~-n~I~vid~~t~~i~~~~~~h-----------------~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
.+-+|. + |-|-+||.+++...+.|-+. +.....+.+-...++++.++++.|..||.||..
T Consensus 1255 ~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1255 VSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred eEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCC
Confidence 245555 4 46999999999999888766 233345777777899999999999999999998
Q ss_pred cccee
Q psy16020 134 TYQHL 138 (151)
Q Consensus 134 t~~~l 138 (151)
+-+..
T Consensus 1335 ~p~~s 1339 (1431)
T KOG1240|consen 1335 RPEIS 1339 (1431)
T ss_pred Ccccc
Confidence 65544
No 211
>KOG1063|consensus
Probab=96.78 E-value=0.0053 Score=54.13 Aligned_cols=124 Identities=15% Similarity=0.219 Sum_probs=74.8
Q ss_pred CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCC-CceEEEeee--CCEEEEEe
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH-HSVRSLAAV--YNKVWCGY 79 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~-~pV~~m~~v--~~~Lw~g~ 79 (151)
...+|+..+++. ..+.|+.-......+..++|++.+|+...+. +--...+.+.... -| .|++.. ++..-.+|
T Consensus 89 ~~~~~i~~~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw~~~~~e---~~~~~~~rf~~k~~ip-LcL~~~~~~~~~lla~ 164 (764)
T KOG1063|consen 89 EYLIKIYTIQGHCKECVCVVARSSVMTCKAADGTVSVWDKQQDE---VFLLAVLRFEIKEAIP-LCLAALKNNKTFLLAC 164 (764)
T ss_pred hheEEEEeecCcceeEEEEEeeeeEEEeeccCceEEEeecCCCc---eeeehheehhhhhHhh-HHHhhhccCCcEEEEe
Confidence 344566666662 4666665555455555689999999873221 0001122222111 22 244444 35666677
Q ss_pred CCe---EEEEe--CCCCcEEEEEEecCCCCCceeEEEEe---C-CEEEEEEcCCCeEEEEeCCc
Q psy16020 80 KNK---IHVVD--PKSLVVLKSFDAHPRRESQVRQMTWA---G-DGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 80 ~n~---I~vid--~~t~~i~~~~~~h~~~~~~I~~m~~~---~-~~vwis~~~d~~l~lwd~~t 134 (151)
|+. |.++. +.+++...++++|+| -|+.+++. + +-.+.|++.|..||+|-..-
T Consensus 165 Ggs~~~v~~~s~~~d~f~~v~el~GH~D---WIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~ 225 (764)
T KOG1063|consen 165 GGSKFVVDLYSSSADSFARVAELEGHTD---WIRSLAFARLGGDDLLLASSSQDRYIRIWRIVL 225 (764)
T ss_pred cCcceEEEEeccCCcceeEEEEeeccch---hhhhhhhhccCCCcEEEEecCCceEEEEEEEEe
Confidence 654 33333 234568888999998 77777776 3 45589999999999998763
No 212
>KOG1272|consensus
Probab=96.75 E-value=0.0023 Score=54.13 Aligned_cols=127 Identities=13% Similarity=0.146 Sum_probs=83.6
Q ss_pred ceeeeeeCCCceeeeEEeCCe-EEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C-EEEEEeC-C
Q psy16020 7 TPYPLNKILDTALPPVHVQGR-VVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N-KVWCGYK-N 81 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~~~-v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~-~Lw~g~~-n 81 (151)
..||.++=...|..|.|.+.. ++|+.++ |-|.--+. +-|. ....+..+. .+++.|..+. | -+-.|-. +
T Consensus 201 tElHClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DV-S~Gk----lVa~~~t~~--G~~~vm~qNP~NaVih~GhsnG 273 (545)
T KOG1272|consen 201 TELHCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDV-STGK----LVASIRTGA--GRTDVMKQNPYNAVIHLGHSNG 273 (545)
T ss_pred cEEeehhhcCchhhhcccchhheeeecccCCceEEEee-chhh----hhHHHHccC--CccchhhcCCccceEEEcCCCc
Confidence 345666666666666666553 4444333 33332222 1121 111223333 6777777764 3 3445554 5
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
.|..|.+.+-+.+-.+..|. ++|..+++..+|- -++.+-|..+++||.+.+..+..+-.
T Consensus 274 tVSlWSP~skePLvKiLcH~---g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t 333 (545)
T KOG1272|consen 274 TVSLWSPNSKEPLVKILCHR---GPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT 333 (545)
T ss_pred eEEecCCCCcchHHHHHhcC---CCcceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence 89999999999888888896 4899999998877 57778899999999999988888864
No 213
>KOG3881|consensus
Probab=96.71 E-value=0.03 Score=46.54 Aligned_cols=124 Identities=12% Similarity=0.201 Sum_probs=83.2
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-C--CeEEEEeCC
Q psy16020 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-K--NKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~--n~I~vid~~ 89 (151)
.+|-.+.+.++.|..+.++|.|.++....+ |+..-..+.+.. ..++--|-..+ +-+..|- . |.+.+||++
T Consensus 106 ~~I~gl~~~dg~Litc~~sG~l~~~~~k~~---d~hss~l~~la~-g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle 181 (412)
T KOG3881|consen 106 KSIKGLKLADGTLITCVSSGNLQVRHDKSG---DLHSSKLIKLAT-GPGLYDVRQTDTDPYIVATGGKENINELKIWDLE 181 (412)
T ss_pred ccccchhhcCCEEEEEecCCcEEEEeccCC---ccccccceeeec-CCceeeeccCCCCCceEecCchhcccceeeeecc
Confidence 589999999999999999999999987532 322222333322 03444444443 2233343 3 568999988
Q ss_pred CCcEEEEEEecCCCCC--------ceeEEEEe-C--CEEEEEEcCCCeEEEEeCCc-cceeeeEeCCc
Q psy16020 90 SLVVLKSFDAHPRRES--------QVRQMTWA-G--DGVWVSIRLDSTLRMYNAHT-YQHLQDVDIEP 145 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~--------~I~~m~~~-~--~~vwis~~~d~~l~lwd~~t-~~~l~~idi~~ 145 (151)
.. ++.|++-.-+.. -++.+.+. | ...++++.+-+.+|+||++. .+++..||+..
T Consensus 182 ~~--~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E 247 (412)
T KOG3881|consen 182 QS--KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLE 247 (412)
T ss_pred cc--eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEecccc
Confidence 76 788887643211 13344444 3 57799999999999999997 67888888764
No 214
>KOG4328|consensus
Probab=96.71 E-value=0.012 Score=49.66 Aligned_cols=127 Identities=13% Similarity=0.139 Sum_probs=77.1
Q ss_pred CceeeeeeCC-CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC-CCceEEEeeeC---CEEE
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP-HHSVRSLAAVY---NKVW 76 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-~~pV~~m~~v~---~~Lw 76 (151)
......++.. ..|+++.+++ +-|.+|---|+|-+|+....+ -|. ..+-++.+ ..||.||.+.. ++++
T Consensus 176 ~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~-~d~---d~v~~f~~hs~~Vs~l~F~P~n~s~i~ 251 (498)
T KOG4328|consen 176 YRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQE-KDK---DGVYLFTPHSGPVSGLKFSPANTSQIY 251 (498)
T ss_pred ceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCC-Ccc---CceEEeccCCccccceEecCCChhhee
Confidence 4445566655 6899998875 347777777999998874111 111 12333332 27777777742 5555
Q ss_pred EEe-CCeEEEEeCCCCcEE---------------------------------------------EEEEecCCCCCceeEE
Q psy16020 77 CGY-KNKIHVVDPKSLVVL---------------------------------------------KSFDAHPRRESQVRQM 110 (151)
Q Consensus 77 ~g~-~n~I~vid~~t~~i~---------------------------------------------~~~~~h~~~~~~I~~m 110 (151)
.++ ++.|..-|.+++..+ -.+..|. ..|+.|
T Consensus 252 ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~---kKI~sv 328 (498)
T KOG4328|consen 252 SSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHK---KKITSV 328 (498)
T ss_pred eeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhh---ccccee
Confidence 444 566666665543311 0111232 368888
Q ss_pred EEeCC--EEEEEEcCCCeEEEEeCCccceee
Q psy16020 111 TWAGD--GVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 111 ~~~~~--~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
.+-+. .++++++.|.+.++||++....-.
T Consensus 329 ~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~ 359 (498)
T KOG4328|consen 329 ALNPVCPWFLATASLDQTAKIWDLRQLRGKA 359 (498)
T ss_pred ecCCCCchheeecccCcceeeeehhhhcCCC
Confidence 77643 557999999999999999754433
No 215
>KOG1645|consensus
Probab=96.66 E-value=0.071 Score=44.70 Aligned_cols=141 Identities=12% Similarity=0.107 Sum_probs=77.0
Q ss_pred CCceeeeeeCCCceeeeEEe---CCeEEEEecCCcEEEEEcCC-CC----------------------------------
Q psy16020 5 HPTPYPLNKILDTALPPVHV---QGRVVCALADGSVAIFRRGP-DG---------------------------------- 46 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~-~~---------------------------------- 46 (151)
+.-+..+..++.++-+..+. .+.+|+|+.||-|.||+... .+
T Consensus 225 t~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~ 304 (463)
T KOG1645|consen 225 TSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVF 304 (463)
T ss_pred cceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEe
Confidence 33444455555555555553 45799999999999998752 00
Q ss_pred ------CCCCC-----cceEEEeCCCCCceEEEeeeC--CEEEEEeCC-----e---EEE-EeCCCCc-EEEEEEecCCC
Q psy16020 47 ------QWDLS-----KYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-----K---IHV-VDPKSLV-VLKSFDAHPRR 103 (151)
Q Consensus 47 ------~wd~~-----~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-----~---I~v-id~~t~~-i~~~~~~h~~~ 103 (151)
.|+.. .|...+++. ..++.+|...+ +++-+.+.. + |.+ +|-.+|. +...-.++..+
T Consensus 305 ~lt~l~f~ei~~s~~~~p~vlele~-pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs 383 (463)
T KOG1645|consen 305 ALTVLQFYEIVFSAECLPCVLELEP-PGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGS 383 (463)
T ss_pred eehhhhhhhhhccccCCCcccccCC-CcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCC
Confidence 12111 112234443 26667777754 777777642 1 111 1111222 22222223110
Q ss_pred -------CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 104 -------ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 104 -------~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
...|.... ..+.+...++....+.+||+.+++.+|++.+..+|
T Consensus 384 ~~~kl~t~~ai~~~~-~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~epv 433 (463)
T KOG1645|consen 384 KQTKLSTTQAIRAVE-DNNYIVVVGDSTNELILQDPHSFEVVQTLALSEPV 433 (463)
T ss_pred cccccccccceeccc-cccEEEEecCCcceeEEeccchhheeeecccCcce
Confidence 01222211 12445666668889999999999999998776554
No 216
>KOG1007|consensus
Probab=96.64 E-value=0.017 Score=46.59 Aligned_cols=104 Identities=15% Similarity=0.181 Sum_probs=72.9
Q ss_pred eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeCCE--EEEEeC--CeEEEEeCC-CCcEEEEE
Q psy16020 24 VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYNK--VWCGYK--NKIHVVDPK-SLVVLKSF 97 (151)
Q Consensus 24 ~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~~~--Lw~g~~--n~I~vid~~-t~~i~~~~ 97 (151)
+++.-++.+.++++-.|+..... +...+.+ +.+-||.|.++.++ +-+.|| +.|++||++ +....+++
T Consensus 182 Hdgnqv~tt~d~tl~~~D~RT~~-------~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el 254 (370)
T KOG1007|consen 182 HDGNQVATTSDSTLQFWDLRTMK-------KNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQEL 254 (370)
T ss_pred CccceEEEeCCCcEEEEEccchh-------hhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccccc
Confidence 44567777778888888764211 2234443 23779999998643 556665 689999988 45588889
Q ss_pred EecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccce
Q psy16020 98 DAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
++|+- =|=++.+- -+.+.+|++.|+.+.||-+.+-..
T Consensus 255 ~~HsH---WvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSS 293 (370)
T KOG1007|consen 255 PGHSH---WVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSS 293 (370)
T ss_pred CCCce---EEEEEEecCccceEEEecCCCceeEEEecccccc
Confidence 98863 46666655 346688999999999999886443
No 217
>KOG0771|consensus
Probab=96.61 E-value=0.023 Score=47.32 Aligned_cols=118 Identities=15% Similarity=0.180 Sum_probs=74.2
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-CCeEEEEeCCCCcEE
Q psy16020 17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-KNKIHVVDPKSLVVL 94 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~n~I~vid~~t~~i~ 94 (151)
.+.+.-+.+..+=+|..||++.||++.+.. ..+....+...|++|.+.. +++-+.- ++.-.|||.+++...
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~-------t~l~e~~~~~eV~DL~FS~dgk~lasig~d~~~VW~~~~g~~~ 220 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML-------TILEEIAHHAEVKDLDFSPDGKFLASIGADSARVWSVNTGAAL 220 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcch-------hhhhhHhhcCccccceeCCCCcEEEEecCCceEEEEeccCchh
Confidence 455555566678899999999999975211 1112222347777777764 3332222 347777777776211
Q ss_pred EEEE--------------------------e---------------c----------CCCCCceeEEEEeCCEEEEE-Ec
Q psy16020 95 KSFD--------------------------A---------------H----------PRRESQVRQMTWAGDGVWVS-IR 122 (151)
Q Consensus 95 ~~~~--------------------------~---------------h----------~~~~~~I~~m~~~~~~vwis-~~ 122 (151)
.+.+ . | ......|.+|.++.+|-+++ +.
T Consensus 221 a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT 300 (398)
T KOG0771|consen 221 ARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGT 300 (398)
T ss_pred hhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEec
Confidence 1111 0 0 00134899999998888554 55
Q ss_pred CCCeEEEEeCCccceeeeE
Q psy16020 123 LDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 123 ~d~~l~lwd~~t~~~l~~i 141 (151)
.|+.|-++++.+.+.++-+
T Consensus 301 ~dGsVai~~~~~lq~~~~v 319 (398)
T KOG0771|consen 301 MDGSVAIYDAKSLQRLQYV 319 (398)
T ss_pred cCCcEEEEEeceeeeeEee
Confidence 6999999999999888765
No 218
>KOG0307|consensus
Probab=96.61 E-value=0.0019 Score=59.19 Aligned_cols=112 Identities=12% Similarity=0.099 Sum_probs=73.9
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C-EEEEEeC-CeEEEEeCCCCcEEEEEEecCCC
Q psy16020 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N-KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRR 103 (151)
Q Consensus 28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~-~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~ 103 (151)
+--|+.||.|..|+..+.- -+-+....-+...+..+|+.+.++. + -|.-|.+ +.|+|||....+.--+.. ....
T Consensus 83 IaGG~edG~I~ly~p~~~~-~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~-~~~~ 160 (1049)
T KOG0307|consen 83 IAGGLEDGNIVLYDPASII-ANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG-SQAP 160 (1049)
T ss_pred eeccccCCceEEecchhhc-cCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC-CCCC
Confidence 6678999999999876420 0112222234455669999999974 2 2333332 489999998755433332 2223
Q ss_pred CCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 104 ESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 104 ~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
-+.|.++.+-. ..|+.|++.++..-+||.+..+++-++
T Consensus 161 ~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~l 200 (1049)
T KOG0307|consen 161 PSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKL 200 (1049)
T ss_pred cccceEeccchhhhHHhhccCCCCCceeccccCCCccccc
Confidence 45788888863 356999999999999999977655444
No 219
>KOG4378|consensus
Probab=96.60 E-value=0.051 Score=46.77 Aligned_cols=127 Identities=12% Similarity=0.085 Sum_probs=84.6
Q ss_pred CCceeeeeeCC--CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee--eCCEEE-
Q psy16020 5 HPTPYPLNKIL--DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA--VYNKVW- 76 (151)
Q Consensus 5 ~~~~l~~i~l~--~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~--v~~~Lw- 76 (151)
+.+.-..++.+ ++|-=+.|+.. .+-.+.-+|.|.+|+.. |. .|..--...+..|.+.+.+ ++..|.
T Consensus 152 t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~--g~----sp~~~~~~~HsAP~~gicfspsne~l~v 225 (673)
T KOG4378|consen 152 TKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQ--GM----SPIFHASEAHSAPCRGICFSPSNEALLV 225 (673)
T ss_pred cCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEecc--CC----CcccchhhhccCCcCcceecCCccceEE
Confidence 44444556666 34545566543 36677779999999875 21 1211111112367665544 555565
Q ss_pred -EEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020 77 -CGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT-YQHLQDV 141 (151)
Q Consensus 77 -~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t-~~~l~~i 141 (151)
+|++.+|++||..+.+...++...+ +...+++.+.|- ++++...+.|..||.+. .+++..+
T Consensus 226 sVG~Dkki~~yD~~s~~s~~~l~y~~----Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~ 289 (673)
T KOG4378|consen 226 SVGYDKKINIYDIRSQASTDRLTYSH----PLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVR 289 (673)
T ss_pred EecccceEEEeecccccccceeeecC----CcceeeecCCceEEEeecCCceEEEEecccCCCCceEe
Confidence 4556899999999998888888653 788888888877 67777789999999995 5566555
No 220
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=96.58 E-value=0.0074 Score=33.79 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=26.7
Q ss_pred ceeeeeeCCCce-eeeEEeCCeEEEEecCCcEEEEEcC
Q psy16020 7 TPYPLNKILDTA-LPPVHVQGRVVCALADGSVAIFRRG 43 (151)
Q Consensus 7 ~~l~~i~l~~~V-~~i~~~~~~v~vgl~nG~l~v~~~~ 43 (151)
+.+|+.+++.++ ..+...+++||++..||.|.+++..
T Consensus 2 ~~~W~~~~~~~~~~~~~v~~g~vyv~~~dg~l~ald~~ 39 (40)
T PF13570_consen 2 KVLWSYDTGGPIWSSPAVAGGRVYVGTGDGNLYALDAA 39 (40)
T ss_dssp -EEEEEE-SS---S--EECTSEEEEE-TTSEEEEEETT
T ss_pred ceeEEEECCCCcCcCCEEECCEEEEEcCCCEEEEEeCC
Confidence 678999999766 5578889999999999999999863
No 221
>KOG4190|consensus
Probab=96.57 E-value=0.0097 Score=51.83 Aligned_cols=121 Identities=12% Similarity=0.233 Sum_probs=84.5
Q ss_pred eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-EEEEEeCCeEEEEeCCCCcEEEEEEecCC
Q psy16020 24 VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-KVWCGYKNKIHVVDPKSLVVLKSFDAHPR 102 (151)
Q Consensus 24 ~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-~Lw~g~~n~I~vid~~t~~i~~~~~~h~~ 102 (151)
.+|....+..|-++..|+..+.|.=--.....++...++.||..+-+..+ +--++|++-|++||+--+....+.+-.+.
T Consensus 746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk 825 (1034)
T KOG4190|consen 746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPK 825 (1034)
T ss_pred cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCcc
Confidence 34556677778999999988655200012234455556799999999864 46678899999999998887776654332
Q ss_pred --CCCceeEEEEeCCEEEEEE-cCCCeEEEEeCCccceeeeEeCC
Q psy16020 103 --RESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 103 --~~~~I~~m~~~~~~vwis~-~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
....|.|+......+.+++ +-.++++++|+++++-..+..+.
T Consensus 826 ~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVc 870 (1034)
T KOG4190|consen 826 EGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVC 870 (1034)
T ss_pred cCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEec
Confidence 1234666665555666665 88999999999998877776554
No 222
>KOG4547|consensus
Probab=96.52 E-value=0.056 Score=46.76 Aligned_cols=110 Identities=19% Similarity=0.200 Sum_probs=72.3
Q ss_pred eCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeCC-EEEEEeCCeEEEEeC
Q psy16020 13 KILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYN-KVWCGYKNKIHVVDP 88 (151)
Q Consensus 13 ~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~~-~Lw~g~~n~I~vid~ 88 (151)
+.+..|.++.-.. +.+|.+.+|+.+..+... ....+..-. .+..+-++.+..+ .+-.....+|.+||+
T Consensus 100 ~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~--------~~~~~~~~~~~~~~~~sl~is~D~~~l~~as~~ik~~~~ 171 (541)
T KOG4547|consen 100 KHYGNVNEILDAQRLGCIYSVGADLKVVYILEK--------EKVIIRIWKEQKPLVSSLCISPDGKILLTASRQIKVLDI 171 (541)
T ss_pred CCCCcceeeecccccCceEecCCceeEEEEecc--------cceeeeeeccCCCccceEEEcCCCCEEEeccceEEEEEc
Confidence 4556788887544 369999999999888754 222333221 1255556666543 333333468999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEe-------CCEEEEEEcCCCeEEEEeCC
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWA-------GDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~-------~~~vwis~~~d~~l~lwd~~ 133 (151)
+|+++..+|++|.. +|+++.+. |..|+-+..-...+-.|-.+
T Consensus 172 ~~kevv~~ftgh~s---~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 172 ETKEVVITFTGHGS---PVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred cCceEEEEecCCCc---ceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 99999999999974 78887776 34556555556666666555
No 223
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.52 E-value=0.059 Score=37.46 Aligned_cols=69 Identities=23% Similarity=0.357 Sum_probs=49.9
Q ss_pred CCceeeeeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC------CEEEE
Q psy16020 5 HPTPYPLNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY------NKVWC 77 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~------~~Lw~ 77 (151)
..+.+.+++-++.|.+|.+.. ++..-||+||+|-+|++. ...| .+.. ++.+.||...+ .+|-+
T Consensus 32 ~~e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~-~RlW--------RiKS-K~~~~~~~~~D~~gdG~~eLI~ 101 (111)
T PF14783_consen 32 GDEIVAEITETDKVTSLCSLGGGRFAYALANGTVGVYDRS-QRLW--------RIKS-KNQVTSMAFYDINGDGVPELIV 101 (111)
T ss_pred CCcEEEEEecccceEEEEEcCCCEEEEEecCCEEEEEeCc-ceee--------eecc-CCCeEEEEEEcCCCCCceEEEE
Confidence 346789999999999999865 467789999999999873 2345 3322 35577888864 26777
Q ss_pred EeCC-eE
Q psy16020 78 GYKN-KI 83 (151)
Q Consensus 78 g~~n-~I 83 (151)
|..| +|
T Consensus 102 GwsnGkv 108 (111)
T PF14783_consen 102 GWSNGKV 108 (111)
T ss_pred EecCCeE
Confidence 7753 55
No 224
>KOG0280|consensus
Probab=96.49 E-value=0.066 Score=43.27 Aligned_cols=110 Identities=12% Similarity=0.196 Sum_probs=69.9
Q ss_pred EEeCCeEEEEecCCcEE-EEEcC----CCCCCCCCcceEEEeC-CCCCceEEEeeeCCEEEEEeC-CeEEEEeCC-CCc-
Q psy16020 22 VHVQGRVVCALADGSVA-IFRRG----PDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYK-NKIHVVDPK-SLV- 92 (151)
Q Consensus 22 ~~~~~~v~vgl~nG~l~-v~~~~----~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~-t~~- 92 (151)
...+.++|+++++|.+. |+... +...|........... +.++| +-+|.|.+ +++..||.+ ..+
T Consensus 130 ~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~p--------nlvytGgDD~~l~~~D~R~p~~~ 201 (339)
T KOG0280|consen 130 STSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEP--------NLVYTGGDDGSLSCWDIRIPKTF 201 (339)
T ss_pred eccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCC--------ceEEecCCCceEEEEEecCCcce
Confidence 33466899999999998 44332 1123433322222111 11233 56788885 589999988 232
Q ss_pred EEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc-cceeeeEe
Q psy16020 93 VLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT-YQHLQDVD 142 (151)
Q Consensus 93 i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t-~~~l~~id 142 (151)
+.+.-..|+. .|.++..++. ...++++.|-.|++||++. ++++.+=.
T Consensus 202 i~~n~kvH~~---GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~ 251 (339)
T KOG0280|consen 202 IWHNSKVHTS---GVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK 251 (339)
T ss_pred eeecceeeec---ceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc
Confidence 3333456653 7888888754 2367999999999999995 77776543
No 225
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=96.49 E-value=0.27 Score=37.89 Aligned_cols=121 Identities=16% Similarity=0.220 Sum_probs=82.2
Q ss_pred CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEee-e--CCEEEEE--e-CCeEE
Q psy16020 14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAA-V--YNKVWCG--Y-KNKIH 84 (151)
Q Consensus 14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~-v--~~~Lw~g--~-~n~I~ 84 (151)
..+.+.++.+... .+..+..+|.+.+|+..... .....+.. ...++..+.. . .+....+ . .+.+.
T Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 137 (466)
T COG2319 64 HEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE------KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVK 137 (466)
T ss_pred ccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc------eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEE
Confidence 4467777777533 35555569999999875321 12222222 1136666665 3 2323433 3 35899
Q ss_pred EEeCCC-CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcC-CCeEEEEeCCccceeeeEeC
Q psy16020 85 VVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRL-DSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 85 vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~-d~~l~lwd~~t~~~l~~idi 143 (151)
+||..+ ......+..|.. .|..+.+.+++ .+++.+. |+.+++|+..+.+.++.+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (466)
T COG2319 138 LWDLSTPGKLIRTLEGHSE---SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG 196 (466)
T ss_pred EEEecCCCeEEEEEecCcc---cEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc
Confidence 999998 899999999975 88899999887 4666665 99999999998777776653
No 226
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.49 E-value=0.17 Score=44.04 Aligned_cols=136 Identities=14% Similarity=0.151 Sum_probs=83.7
Q ss_pred CCCCceeeeeeCCCc-----ee-eeEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCcce---------------
Q psy16020 3 YPHPTPYPLNKILDT-----AL-PPVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYH--------------- 54 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~-----V~-~i~~~~~~v~vgl~------nG~l~v~~~~~~~-~wd~~~~~--------------- 54 (151)
..+.+.+|+.++.+. +. .-...++.||++.+ +|.|..|+...+. .|......
T Consensus 137 a~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~ 216 (527)
T TIGR03075 137 AKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGG 216 (527)
T ss_pred CCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCccccccccccccc
Confidence 456788888876531 21 22345789999975 6899999885432 35433210
Q ss_pred ----------EEEeCCCCCceE-EEee--eCCEEEEEeCC-----------------eEEEEeCCCCcEEEEEEecC-C-
Q psy16020 55 ----------TVTLGLPHHSVR-SLAA--VYNKVWCGYKN-----------------KIHVVDPKSLVVLKSFDAHP-R- 102 (151)
Q Consensus 55 ----------~i~l~~~~~pV~-~m~~--v~~~Lw~g~~n-----------------~I~vid~~t~~i~~~~~~h~-~- 102 (151)
..+.+. .++= .|.+ ..+.||.+.|| .|..+|++|++++=.|+..+ |
T Consensus 217 ~~~~~tw~~~~~~~gg--~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~ 294 (527)
T TIGR03075 217 EPGAKTWPGDAWKTGG--GATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDE 294 (527)
T ss_pred ccccCCCCCCccccCC--CCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCC
Confidence 001111 1121 1122 23567777744 89999999999987777532 1
Q ss_pred ----CCCc--eeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeee
Q psy16020 103 ----RESQ--VRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 103 ----~~~~--I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
...+ +..+...|. .+.+...+++.+.+.|.+|++++..
T Consensus 295 wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~ 340 (527)
T TIGR03075 295 WDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSA 340 (527)
T ss_pred ccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceecc
Confidence 1122 233333444 4688999999999999999999743
No 227
>KOG1310|consensus
Probab=96.47 E-value=0.018 Score=50.02 Aligned_cols=110 Identities=17% Similarity=0.251 Sum_probs=73.3
Q ss_pred CceeeeEEeC-CeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEe-CC-eEEEEeC
Q psy16020 16 DTALPPVHVQ-GRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGY-KN-KIHVVDP 88 (151)
Q Consensus 16 ~~V~~i~~~~-~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~-~n-~I~vid~ 88 (151)
.=|.||.... +.++++++|- .+.||+.. ..+..+.|.-|. ...|.|..++ ++++-+.+ |+ .|+++|+
T Consensus 51 GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~-----~~KllhsI~TgH-taNIFsvKFvP~tnnriv~sgAgDk~i~lfdl 124 (758)
T KOG1310|consen 51 GCVNCLEWNADGELLASGSDDTRLIVWDPF-----EYKLLHSISTGH-TANIFSVKFVPYTNNRIVLSGAGDKLIKLFDL 124 (758)
T ss_pred ceecceeecCCCCEEeecCCcceEEeecch-----hcceeeeeeccc-ccceeEEeeeccCCCeEEEeccCcceEEEEec
Confidence 3577777753 4555555554 46666543 112334455553 5889999997 46655554 55 6999999
Q ss_pred CCCc----------EEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc
Q psy16020 89 KSLV----------VLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 89 ~t~~----------i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t 134 (151)
.+.+ ..+.+..|++ .|..++..+++ ++.|+++|++||=||.+.
T Consensus 125 ~~~~~~~~d~~~~~~~~~~~cht~---rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 125 DSSKEGGMDHGMEETTRCWSCHTD---RVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred ccccccccccCccchhhhhhhhhh---hhhheecCCCCCceEEEecCCcceeeecccC
Confidence 8622 3345778887 78888887543 444999999999999985
No 228
>KOG0267|consensus
Probab=96.44 E-value=0.0054 Score=54.34 Aligned_cols=93 Identities=18% Similarity=0.287 Sum_probs=69.8
Q ss_pred CCCCCcceEE-EeCCCCCceEEEeeeCCEEEEEe---CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEE-E
Q psy16020 47 QWDLSKYHTV-TLGLPHHSVRSLAAVYNKVWCGY---KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVS-I 121 (151)
Q Consensus 47 ~wd~~~~~~i-~l~~~~~pV~~m~~v~~~Lw~g~---~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis-~ 121 (151)
.||++.-+.+ .|-.+..++.++.+..-.=|.++ +..+.+||.+-.-+.+.+.+|+. .|..+.++++|-|+. +
T Consensus 96 ~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~---vv~~l~lsP~Gr~v~~g 172 (825)
T KOG0267|consen 96 VWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR---VVDVLRLSPDGRWVASG 172 (825)
T ss_pred eeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcc---eeEEEeecCCCceeecc
Confidence 5888876644 33333477778777653323333 35799999998889999999975 899999999997655 4
Q ss_pred cCCCeEEEEeCCccceeeeEe
Q psy16020 122 RLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 122 ~~d~~l~lwd~~t~~~l~~id 142 (151)
.+|.++++||...++.+.+++
T Consensus 173 ~ed~tvki~d~~agk~~~ef~ 193 (825)
T KOG0267|consen 173 GEDNTVKIWDLTAGKLSKEFK 193 (825)
T ss_pred CCcceeeeecccccccccccc
Confidence 556999999999888887775
No 229
>KOG2139|consensus
Probab=96.42 E-value=0.025 Score=46.88 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=71.9
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeCCeEEEEeCC-CCcEEEE---EEe
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKNKIHVVDPK-SLVVLKS---FDA 99 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~n~I~vid~~-t~~i~~~---~~~ 99 (151)
..-+|+-|-.|.+|+.+. +.|..++- ..+.-|+||+.- ...|.+||..-|-+|... ++..-+. ...
T Consensus 112 ~fava~nddvVriy~kss------t~pt~Lks-~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~ 184 (445)
T KOG2139|consen 112 AFAVATNDDVVRIYDKSS------TCPTKLKS-VSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMST 184 (445)
T ss_pred hhhhhccCcEEEEeccCC------CCCceecc-hhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccccccccccc
Confidence 344566688999998753 23344443 236899999995 478999999988888655 3332221 111
Q ss_pred cC------CCCCceeEEEEeCCEE-EEEEcC-CCeEEEEeCCccceeeeE
Q psy16020 100 HP------RRESQVRQMTWAGDGV-WVSIRL-DSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 100 h~------~~~~~I~~m~~~~~~v-wis~~~-d~~l~lwd~~t~~~l~~i 141 (151)
|. ...-+|+.|.+.++|- |++.+- |+.|++||..|++...-+
T Consensus 185 ~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~ 234 (445)
T KOG2139|consen 185 HHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI 234 (445)
T ss_pred cchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc
Confidence 10 1124899999997766 777664 788999999987654433
No 230
>KOG2321|consensus
Probab=96.42 E-value=0.01 Score=51.58 Aligned_cols=83 Identities=10% Similarity=0.181 Sum_probs=66.0
Q ss_pred CceEEEeeeC--CEEE-EEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCcccee
Q psy16020 63 HSVRSLAAVY--NKVW-CGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 63 ~pV~~m~~v~--~~Lw-~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l 138 (151)
.+-|.|.+.. -.|| +|+|+.||=+|++-|..++.|+.... .++++... -+|+..++..++.+..||.++.+.+
T Consensus 134 ~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~---~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv 210 (703)
T KOG2321|consen 134 KFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSG---ELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRV 210 (703)
T ss_pred cCCccccccCCCccEEEeecCcceEEEEccccccccccccccc---cceeeeecCccceEEecccCceEEEecchhhhhh
Confidence 5667787764 2355 56688999999999999999997653 67776666 4566666667999999999999999
Q ss_pred eeEeCCcccc
Q psy16020 139 QDVDIEPYVS 148 (151)
Q Consensus 139 ~~idi~~~v~ 148 (151)
..+|+...|+
T Consensus 211 ~~l~~~~~v~ 220 (703)
T KOG2321|consen 211 GTLDAASSVN 220 (703)
T ss_pred eeeecccccC
Confidence 9999988754
No 231
>KOG1587|consensus
Probab=96.37 E-value=0.058 Score=47.22 Aligned_cols=134 Identities=18% Similarity=0.092 Sum_probs=86.5
Q ss_pred CceeeeeeCCCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC----------CCCceEEEeee
Q psy16020 6 PTPYPLNKILDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL----------PHHSVRSLAAV 71 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~----------~~~pV~~m~~v 71 (151)
+-+..+...++++..++...+ .+|.+.+||.|+-|+.. .+..|....+.. ....+++|.+.
T Consensus 282 ~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~-----~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~ 356 (555)
T KOG1587|consen 282 GLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTD-----MLSLPVEGLLLESKKHKGQQSSKAVGATSLKFE 356 (555)
T ss_pred ccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeecc-----ccccchhhcccccccccccccccccceeeEeec
Confidence 345556677789999988543 49999999999999765 222322111111 12567888885
Q ss_pred ---CCEEEEEeC-CeEEEEeCCCCcEEE--EEEec---CCCCCceeEEEEeCCEE--EEEEcCCCeEEEEeCC-ccceee
Q psy16020 72 ---YNKVWCGYK-NKIHVVDPKSLVVLK--SFDAH---PRRESQVRQMTWAGDGV--WVSIRLDSTLRMYNAH-TYQHLQ 139 (151)
Q Consensus 72 ---~~~Lw~g~~-n~I~vid~~t~~i~~--~~~~h---~~~~~~I~~m~~~~~~v--wis~~~d~~l~lwd~~-t~~~l~ 139 (151)
.++..+|.+ |.|+.-+...++..- .+++| .-....|.++...+-+. ++|++ |-++++|+.. ...++.
T Consensus 357 ~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~ 435 (555)
T KOG1587|consen 357 PTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLL 435 (555)
T ss_pred cCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcch
Confidence 367888885 788887666544322 22222 22245889888886654 66666 9999999998 566665
Q ss_pred eEeCCc
Q psy16020 140 DVDIEP 145 (151)
Q Consensus 140 ~idi~~ 145 (151)
..+-++
T Consensus 436 ~~~~~~ 441 (555)
T KOG1587|consen 436 SLDSSP 441 (555)
T ss_pred hhhhcc
Confidence 555433
No 232
>KOG0771|consensus
Probab=96.24 E-value=0.0092 Score=49.64 Aligned_cols=72 Identities=22% Similarity=0.266 Sum_probs=57.8
Q ss_pred EEEeeeC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 66 RSLAAVY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 66 ~~m~~v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.+|++.. ..|-+|. ++.++||+-.+++.+..+.+|.. .|.+|.++++| .++|.+.| ..++|++.++-+++..
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~---eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~ 223 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHA---EVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARK 223 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcC---ccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhc
Confidence 6777763 5677775 67999999666776666666753 89999999999 58899999 9999999999777765
No 233
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=96.20 E-value=0.025 Score=30.71 Aligned_cols=36 Identities=6% Similarity=-0.002 Sum_probs=30.5
Q ss_pred CceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEE
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFR 41 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~ 41 (151)
++++++++-+ ++|.+|.+.++ .+.+|..||+|.+|+
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 3678888866 89999999765 799999999999995
No 234
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.18 E-value=0.025 Score=28.52 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=30.1
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEe
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYN 131 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd 131 (151)
++....+.+|.+ .|.++.+.+. ..+++++.|+.+++||
T Consensus 2 ~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTG---PVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCC---ceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456677777764 8999988754 5588999999999996
No 235
>KOG0641|consensus
Probab=96.17 E-value=0.2 Score=39.36 Aligned_cols=84 Identities=14% Similarity=0.262 Sum_probs=60.4
Q ss_pred CCCCCcceEEE-eCC-------CCCceEEEeee-CCEEEEEe-C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC
Q psy16020 47 QWDLSKYHTVT-LGL-------PHHSVRSLAAV-YNKVWCGY-K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD 115 (151)
Q Consensus 47 ~wd~~~~~~i~-l~~-------~~~pV~~m~~v-~~~Lw~g~-~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~ 115 (151)
.||+..+..+. +++ -.+.|.++++- .++|-+.. . ..-..+|.+.+...++|..|+. -|.|+.+++.
T Consensus 208 fwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsa---dir~vrfsp~ 284 (350)
T KOG0641|consen 208 FWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSA---DIRCVRFSPG 284 (350)
T ss_pred EEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCcc---ceeEEEeCCC
Confidence 36776665443 222 11456655553 35655443 3 4677889999999999999975 8999999976
Q ss_pred EE-EEEEcCCCeEEEEeCC
Q psy16020 116 GV-WVSIRLDSTLRMYNAH 133 (151)
Q Consensus 116 ~v-wis~~~d~~l~lwd~~ 133 (151)
.- .++++.|..|++-|.+
T Consensus 285 a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 285 AHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred ceEEEEecccceEEEeecc
Confidence 55 7899999999999987
No 236
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.15 E-value=0.11 Score=47.38 Aligned_cols=127 Identities=11% Similarity=0.095 Sum_probs=88.8
Q ss_pred CCCCCceeeeeeCCC--ceeeeEEe-------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC
Q psy16020 2 EYPHPTPYPLNKILD--TALPPVHV-------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~--~V~~i~~~-------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~ 72 (151)
.+...+.+.+-++.+ +|.++... +.+.|+|+++..|.-++..-.|.--... ...-...+..-.|++..+
T Consensus 510 DLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~--~~k~Y~~~~~Fs~~aTt~ 587 (794)
T PF08553_consen 510 DLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS--QSKQYSSKNNFSCFATTE 587 (794)
T ss_pred ecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeec--cccccccCCCceEEEecC
Confidence 345566666667663 46777553 4579999999999888765433100000 011122347788998875
Q ss_pred -CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 73 -NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 73 -~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
+.|.+|+. |.|+.||.....-+..|.+- ..+|.+|.++.+|-|+-+--+..|-|+|+.
T Consensus 588 ~G~iavgs~~G~IRLyd~~g~~AKT~lp~l---G~pI~~iDvt~DGkwilaTc~tyLlLi~t~ 647 (794)
T PF08553_consen 588 DGYIAVGSNKGDIRLYDRLGKRAKTALPGL---GDPIIGIDVTADGKWILATCKTYLLLIDTL 647 (794)
T ss_pred CceEEEEeCCCcEEeecccchhhhhcCCCC---CCCeeEEEecCCCcEEEEeecceEEEEEEe
Confidence 89999995 79999996544444445543 349999999999999999999999999985
No 237
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.15 E-value=0.28 Score=41.19 Aligned_cols=116 Identities=16% Similarity=0.246 Sum_probs=68.9
Q ss_pred eeeeEEeC--CeEEEEecCCcEEEEEcCCCCCC---------CCC---------cceEEEeCC-----------------
Q psy16020 18 ALPPVHVQ--GRVVCALADGSVAIFRRGPDGQW---------DLS---------KYHTVTLGL----------------- 60 (151)
Q Consensus 18 V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~w---------d~~---------~~~~i~l~~----------------- 60 (151)
|..+.+.. ..+.||+.+|.+++|++.....- |.. ....+.+.+
T Consensus 4 v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~~ 83 (395)
T PF08596_consen 4 VTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLLD 83 (395)
T ss_dssp EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE-
T ss_pred EEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhee
Confidence 45555543 57999999999999988632111 000 011111111
Q ss_pred -CCCceEEEeeeC-CEEEEEeC-CeEEEEeCCCCcEEEEEEecC-----CCCCceeEEEEe-----CCE---E-EEEEcC
Q psy16020 61 -PHHSVRSLAAVY-NKVWCGYK-NKIHVVDPKSLVVLKSFDAHP-----RRESQVRQMTWA-----GDG---V-WVSIRL 123 (151)
Q Consensus 61 -~~~pV~~m~~v~-~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~-----~~~~~I~~m~~~-----~~~---v-wis~~~ 123 (151)
.+.||+++...+ +-+.+||. +++.|+|.+.=.+..+-.... .....|++|++. +++ + .+.+.+
T Consensus 84 ~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn 163 (395)
T PF08596_consen 84 AKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN 163 (395)
T ss_dssp --S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred ccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence 148999999977 89999995 699999999888877744332 234568888776 332 3 445566
Q ss_pred CCeEEEEeCC
Q psy16020 124 DSTLRMYNAH 133 (151)
Q Consensus 124 d~~l~lwd~~ 133 (151)
.+.+..|...
T Consensus 164 ~G~v~~fkIl 173 (395)
T PF08596_consen 164 SGNVLTFKIL 173 (395)
T ss_dssp TSEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 6888777543
No 238
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.10 E-value=0.21 Score=38.82 Aligned_cols=119 Identities=14% Similarity=0.167 Sum_probs=72.5
Q ss_pred eeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEEEeCCCCcEEEEE
Q psy16020 20 PPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVVDPKSLVVLKSF 97 (151)
Q Consensus 20 ~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vid~~t~~i~~~~ 97 (151)
|....++++|+|+.+| |.+|+.... .. ..++.. ..+|+-|..++ +.|-+=+++.++++|..++......
T Consensus 2 c~~~~~~~L~vGt~~G-l~~~~~~~~-----~~--~~~i~~-~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~ 72 (275)
T PF00780_consen 2 CADSWGDRLLVGTEDG-LYVYDLSDP-----SK--PTRILK-LSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTS 72 (275)
T ss_pred CcccCCCEEEEEECCC-EEEEEecCC-----cc--ceeEee-cceEEEEEEecccCEEEEEcCCccEEEEchhhcccccc
Confidence 5567788999999888 888887211 11 112221 15699999987 6777778899999999988765522
Q ss_pred E----------e-cCCCCCceeEEE---EeCC--EEEEEEcCCCeEEEEeCC----cc-ceeeeEeCCccccc
Q psy16020 98 D----------A-HPRRESQVRQMT---WAGD--GVWVSIRLDSTLRMYNAH----TY-QHLQDVDIEPYVSK 149 (151)
Q Consensus 98 ~----------~-h~~~~~~I~~m~---~~~~--~vwis~~~d~~l~lwd~~----t~-~~l~~idi~~~v~~ 149 (151)
. . .-.....++..+ .... -+-++.++ .|.+|... .+ +..++|.+......
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk--~i~i~~~~~~~~~f~~~~ke~~lp~~~~~ 143 (275)
T PF00780_consen 73 APLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKK--KILIYEWNDPRNSFSKLLKEISLPDPPSS 143 (275)
T ss_pred ccccccccccccccccccCCeeEEeeccccccceEEEEEECC--EEEEEEEECCcccccceeEEEEcCCCcEE
Confidence 1 0 001112344444 1122 22344444 66666554 35 78899988765543
No 239
>KOG2919|consensus
Probab=96.09 E-value=0.053 Score=44.44 Aligned_cols=77 Identities=21% Similarity=0.251 Sum_probs=57.7
Q ss_pred EeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC-CCcEEEEEEecCC-CCCceeEEEEeCCE-EEEEEcCCCeEEE
Q psy16020 57 TLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK-SLVVLKSFDAHPR-RESQVRQMTWAGDG-VWVSIRLDSTLRM 129 (151)
Q Consensus 57 ~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~-t~~i~~~~~~h~~-~~~~I~~m~~~~~~-vwis~~~d~~l~l 129 (151)
.++.++.-|+-+... +++|+.|.. .+|.+||++ +.+.+-.++.|.. ..+.|.- ...+.+ .+.|++.|+.|++
T Consensus 245 llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~F-Dld~~~~~LasG~tdG~V~v 323 (406)
T KOG2919|consen 245 LLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILF-DLDPKGEILASGDTDGSVRV 323 (406)
T ss_pred eecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEE-ecCCCCceeeccCCCccEEE
Confidence 455667899999997 489999985 599999988 6778888888865 3444432 222333 3667779999999
Q ss_pred EeCCc
Q psy16020 130 YNAHT 134 (151)
Q Consensus 130 wd~~t 134 (151)
||..+
T Consensus 324 wdlk~ 328 (406)
T KOG2919|consen 324 WDLKD 328 (406)
T ss_pred EecCC
Confidence 99998
No 240
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.08 E-value=0.31 Score=45.86 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=71.4
Q ss_pred eeeeEEeC--CeEEEEec-CCcEEEEEcCCCCC-C----CC-CcceEEEeCCC---------CCceEEEeee-CCEEEEE
Q psy16020 18 ALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQ-W----DL-SKYHTVTLGLP---------HHSVRSLAAV-YNKVWCG 78 (151)
Q Consensus 18 V~~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~-w----d~-~~~~~i~l~~~---------~~pV~~m~~v-~~~Lw~g 78 (151)
+..|...+ +++|++-. |+.|.+|+...++. + +. ........|+. ..| ..|++. ++.||++
T Consensus 742 P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P-~Gvavd~dG~LYVA 820 (1057)
T PLN02919 742 PSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHP-LGVLCAKDGQIYVA 820 (1057)
T ss_pred ccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCC-ceeeEeCCCcEEEE
Confidence 33455543 45888765 47899998753321 0 00 00001112210 134 355654 4679998
Q ss_pred eC--CeEEEEeCCCCcEEEEEEec----C------CCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccce
Q psy16020 79 YK--NKIHVVDPKSLVVLKSFDAH----P------RRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 79 ~~--n~I~vid~~t~~i~~~~~~h----~------~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~ 137 (151)
.. ++|.+||++++.+......- . ........|+++++ .++++-..++.|++||..+.+.
T Consensus 821 Ds~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 821 DSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred ECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 73 58999999998876443211 0 01124667777744 4699999999999999998765
No 241
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.06 E-value=0.22 Score=38.28 Aligned_cols=99 Identities=17% Similarity=0.217 Sum_probs=62.2
Q ss_pred eeeEEeC--CeEEEE-ecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCCC
Q psy16020 19 LPPVHVQ--GRVVCA-LADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSL 91 (151)
Q Consensus 19 ~~i~~~~--~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t~ 91 (151)
.-|.+.+ +.+|++ ...+.|..|+.+.++. .+..++.+ .+.....-...|++- ++.||+++ +++|+++|++ +
T Consensus 137 NGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G 214 (246)
T PF08450_consen 137 NGIAFSPDGKTLYVADSFNGRIWRFDLDADGG-ELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-G 214 (246)
T ss_dssp EEEEEETTSSEEEEEETTTTEEEEEEEETTTC-CEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-S
T ss_pred cceEECCcchheeecccccceeEEEecccccc-ceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-c
Confidence 3455543 358865 4567799998865442 22333333 444311124566663 68999996 5799999998 9
Q ss_pred cEEEEEEecCCCCCceeEEEEeCC---EEEEEEc
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWAGD---GVWVSIR 122 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~ 122 (151)
++...++.-. ..++++++.|. .+|++..
T Consensus 215 ~~~~~i~~p~---~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 215 KLLREIELPV---PRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp CEEEEEE-SS---SSEEEEEEESTTSSEEEEEEB
T ss_pred cEEEEEcCCC---CCEEEEEEECCCCCEEEEEeC
Confidence 9999888653 38899999643 4687765
No 242
>KOG0644|consensus
Probab=96.04 E-value=0.004 Score=56.10 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=77.8
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEE--Ee-CCeEEEEeCCC
Q psy16020 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC--GY-KNKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~--g~-~n~I~vid~~t 90 (151)
.+|+|-.+. +.+|+.|.-|-.+.||+-. ++ .+.-.+..+..-|+-|++..+.+-. |+ +.-|.||...+
T Consensus 191 naVyca~fDrtg~~Iitgsdd~lvKiwS~e-t~------~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~ 263 (1113)
T KOG0644|consen 191 NAVYCAIFDRTGRYIITGSDDRLVKIWSME-TA------RCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD 263 (1113)
T ss_pred hheeeeeeccccceEeecCccceeeeeecc-ch------hhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCC
Confidence 467776663 4468888777777787732 11 1222444456889999998655433 33 33599999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
+.....+.+|+- .|+++++++-. |.+.|+++++||++
T Consensus 264 ~~pvsvLrghtg---avtaiafsP~~---sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 264 GAPVSVLRGHTG---AVTAIAFSPRA---SSSDDGTCRIWDAR 300 (1113)
T ss_pred CchHHHHhcccc---ceeeeccCccc---cCCCCCceEecccc
Confidence 999999999985 99999999877 89999999999999
No 243
>KOG1409|consensus
Probab=96.02 E-value=0.17 Score=41.75 Aligned_cols=126 Identities=17% Similarity=0.270 Sum_probs=77.0
Q ss_pred CCCceeeeee--CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCC-------CC------------CCCcceEEE---
Q psy16020 4 PHPTPYPLNK--ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDG-------QW------------DLSKYHTVT--- 57 (151)
Q Consensus 4 ~~~~~l~~i~--l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~-------~w------------d~~~~~~i~--- 57 (151)
-+.|.=++|+ .|+++.++.|..+ ++|+|+-||++.-|....+= .| ++..-..+.
T Consensus 55 ds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~ 134 (404)
T KOG1409|consen 55 DSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGK 134 (404)
T ss_pred cccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEecc
Confidence 3445555664 6789999999765 69999999999999775310 00 000000000
Q ss_pred --------------eCCCCCceEEEeeeC----CEEEEEe-CCeEEE--EeCCCCcEEEEEEecCCCCCceeEEEEe-CC
Q psy16020 58 --------------LGLPHHSVRSLAAVY----NKVWCGY-KNKIHV--VDPKSLVVLKSFDAHPRRESQVRQMTWA-GD 115 (151)
Q Consensus 58 --------------l~~~~~pV~~m~~v~----~~Lw~g~-~n~I~v--id~~t~~i~~~~~~h~~~~~~I~~m~~~-~~ 115 (151)
+|. +-..|+..-. ...++|- .++|.. +.........++.+|++ .+.++... ++
T Consensus 135 dk~~~~hc~e~~~~lg~--Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~---~~~~l~Wd~~~ 209 (404)
T KOG1409|consen 135 DKQFAWHCTESGNRLGG--YNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTG---EVTCLKWDPGQ 209 (404)
T ss_pred ccceEEEeeccCCcccc--eEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCccc---ceEEEEEcCCC
Confidence 111 0001111100 1223332 233333 33557778888999987 89999998 66
Q ss_pred EEEEEEcCCCeEEEEeCCc
Q psy16020 116 GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 116 ~vwis~~~d~~l~lwd~~t 134 (151)
+++.|+..|..+.+||.--
T Consensus 210 ~~LfSg~~d~~vi~wdigg 228 (404)
T KOG1409|consen 210 RLLFSGASDHSVIMWDIGG 228 (404)
T ss_pred cEEEeccccCceEEEeccC
Confidence 8899999999999999874
No 244
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.02 E-value=0.47 Score=36.41 Aligned_cols=100 Identities=14% Similarity=0.128 Sum_probs=66.2
Q ss_pred CCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeCCeEEEEeCCCCcEEEEEEec--
Q psy16020 25 QGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKNKIHVVDPKSLVVLKSFDAH-- 100 (151)
Q Consensus 25 ~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h-- 100 (151)
.+. .|+...+|.|..|+... .....+.+. .|.-+... -++.||++..+.+.++|+++++++.-+...
T Consensus 11 ~g~l~~~D~~~~~i~~~~~~~------~~~~~~~~~---~~~G~~~~~~~g~l~v~~~~~~~~~d~~~g~~~~~~~~~~~ 81 (246)
T PF08450_consen 11 DGRLYWVDIPGGRIYRVDPDT------GEVEVIDLP---GPNGMAFDRPDGRLYVADSGGIAVVDPDTGKVTVLADLPDG 81 (246)
T ss_dssp TTEEEEEETTTTEEEEEETTT------TEEEEEESS---SEEEEEEECTTSEEEEEETTCEEEEETTTTEEEEEEEEETT
T ss_pred CCEEEEEEcCCCEEEEEECCC------CeEEEEecC---CCceEEEEccCCEEEEEEcCceEEEecCCCcEEEEeeccCC
Confidence 345 45555688888887642 122233443 35444444 368999999988888899999887776652
Q ss_pred CCCCCceeEEEEeCCE-EEEEEcCC--------CeEEEEeCC
Q psy16020 101 PRRESQVRQMTWAGDG-VWVSIRLD--------STLRMYNAH 133 (151)
Q Consensus 101 ~~~~~~I~~m~~~~~~-vwis~~~d--------~~l~lwd~~ 133 (151)
.......+.+++.++| +|++.... +.|..++..
T Consensus 82 ~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~ 123 (246)
T PF08450_consen 82 GVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD 123 (246)
T ss_dssp CSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT
T ss_pred CcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC
Confidence 2134679999999777 68887654 557777777
No 245
>KOG1963|consensus
Probab=95.97 E-value=0.021 Score=51.35 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=60.2
Q ss_pred CEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020 73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK 149 (151)
Q Consensus 73 ~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~~ 149 (151)
..+.+-++|+|.|+...|+++.+.++.|..+.-++........ .-.++++.|+.|++||-+..+++..++..-+++.
T Consensus 29 k~l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~ 106 (792)
T KOG1963|consen 29 KFLFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHA 106 (792)
T ss_pred cEEEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeE
Confidence 4588888999999999999999999999874444433333332 2255999999999999999999999987766553
No 246
>KOG0300|consensus
Probab=95.94 E-value=0.22 Score=40.87 Aligned_cols=89 Identities=15% Similarity=0.253 Sum_probs=61.4
Q ss_pred CCCCc-ceEEEeC-CCCCceEEEeee-CCEEEEEeCC-eEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCE-EEEEE
Q psy16020 48 WDLSK-YHTVTLG-LPHHSVRSLAAV-YNKVWCGYKN-KIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDG-VWVSI 121 (151)
Q Consensus 48 wd~~~-~~~i~l~-~~~~pV~~m~~v-~~~Lw~g~~n-~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~-vwis~ 121 (151)
||+.+ .+.+.+. .+...|++..+. ++++.-|+++ .|+|||.+++. .+.++... ++++.++++-.+ +..--
T Consensus 341 WDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtd----S~~NRvavs~g~~iIAiP 416 (481)
T KOG0300|consen 341 WDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTD----SPANRVAVSKGHPIIAIP 416 (481)
T ss_pred ccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeeecC----CccceeEeecCCceEEec
Confidence 55542 2333332 456999999996 6889999986 79999999876 55555533 589999998555 44444
Q ss_pred cCCCeEEEEeCCccceeeeE
Q psy16020 122 RLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 122 ~~d~~l~lwd~~t~~~l~~i 141 (151)
.+...|||||.. +..+..+
T Consensus 417 hDNRqvRlfDln-G~RlaRl 435 (481)
T KOG0300|consen 417 HDNRQVRLFDLN-GNRLARL 435 (481)
T ss_pred cCCceEEEEecC-CCccccC
Confidence 555679999987 4444433
No 247
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=95.91 E-value=0.29 Score=40.28 Aligned_cols=121 Identities=19% Similarity=0.221 Sum_probs=79.7
Q ss_pred CCeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCC-C----CCc-eEEEeee-CC-EEEEEe-C-CeEEEEeCCCCcE
Q psy16020 25 QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGL-P----HHS-VRSLAAV-YN-KVWCGY-K-NKIHVVDPKSLVV 93 (151)
Q Consensus 25 ~~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~-~----~~p-V~~m~~v-~~-~Lw~g~-~-n~I~vid~~t~~i 93 (151)
+..||+|.=. |.|.||...++|.-..-.......+. | .+| +.+..+- ++ .||+-+ | ++|++++.+.++.
T Consensus 100 g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L 179 (346)
T COG2706 100 GRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKL 179 (346)
T ss_pred CCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcc
Confidence 3468877633 78999999887742111111111221 1 133 5565554 34 455444 3 7999999998887
Q ss_pred EEEEEecCCCCCceeEEEEeCCEE--EEEEcCCCeEEEEeCCc----cceeeeEeCCc
Q psy16020 94 LKSFDAHPRRESQVRQMTWAGDGV--WVSIRLDSTLRMYNAHT----YQHLQDVDIEP 145 (151)
Q Consensus 94 ~~~~~~h~~~~~~I~~m~~~~~~v--wis~~~d~~l~lwd~~t----~~~l~~idi~~ 145 (151)
...-++.-.....-++|++.+++- ++..--+++|.+|.... ++.+|.|+.-|
T Consensus 180 ~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP 237 (346)
T COG2706 180 TPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLP 237 (346)
T ss_pred ccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCc
Confidence 766555545567789999997654 78888899999998765 67888887654
No 248
>KOG2695|consensus
Probab=95.86 E-value=0.026 Score=46.55 Aligned_cols=117 Identities=13% Similarity=0.094 Sum_probs=72.9
Q ss_pred eeeeeeCCCceeeeEEeCCeE--EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCC-e
Q psy16020 8 PYPLNKILDTALPPVHVQGRV--VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKN-K 82 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~~~~~v--~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n-~ 82 (151)
.+.++++|++-.|+-..+-.- |....+-.+.+-++..+ ..+.+. .++-|-++.+. ++-|.+||.| .
T Consensus 205 ~~~SlQi~~a~~CawSlni~gyhfs~G~sqqv~L~nvetg------~~qsf~---sksDVfAlQf~~s~nLv~~GcRnge 275 (425)
T KOG2695|consen 205 MLCSLQIPKAWSCAWSLNIMGYHFSVGLSQQVLLTNVETG------HQQSFQ---SKSDVFALQFAGSDNLVFNGCRNGE 275 (425)
T ss_pred ceeeecCCcchhhhhhhccceeeecccccceeEEEEeecc------cccccc---cchhHHHHHhcccCCeeEecccCCc
Confidence 356777777777654333222 32333444555554321 112222 23667777775 4679999986 7
Q ss_pred EEEEeCCCC-----cEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccce
Q psy16020 83 IHVVDPKSL-----VVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 83 I~vid~~t~-----~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
|+++|.+.. ...++|. |. +.|++|.... +.-+++-+-++.|+|||.+--++
T Consensus 276 I~~iDLR~rnqG~~~~a~rly-h~---Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~ 333 (425)
T KOG2695|consen 276 IFVIDLRCRNQGNGWCAQRLY-HD---SSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKC 333 (425)
T ss_pred EEEEEeeecccCCCcceEEEE-cC---cchhhhhhhccccceEeeccCcCceeEeeehhhhc
Confidence 999998864 3445555 53 4777776653 33388889999999999997666
No 249
>KOG1063|consensus
Probab=95.73 E-value=0.02 Score=50.63 Aligned_cols=74 Identities=20% Similarity=0.292 Sum_probs=61.4
Q ss_pred EeCCCCCceEEEeeeC--CEEEEEeC-----C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeE
Q psy16020 57 TLGLPHHSVRSLAAVY--NKVWCGYK-----N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTL 127 (151)
Q Consensus 57 ~l~~~~~pV~~m~~v~--~~Lw~g~~-----n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l 127 (151)
+|..+..-|.|++... +-+.-+|. + -|.+|++.+....+.++.|+- .|+.|+++++|- ++|.++|.+.
T Consensus 520 KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsL---TVT~l~FSpdg~~LLsvsRDRt~ 596 (764)
T KOG1063|consen 520 KLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSL---TVTRLAFSPDGRYLLSVSRDRTV 596 (764)
T ss_pred HhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccce---EEEEEEECCCCcEEEEeecCceE
Confidence 4555568899999974 44666663 2 499999999999999999975 899999998877 8999999999
Q ss_pred EEEeCC
Q psy16020 128 RMYNAH 133 (151)
Q Consensus 128 ~lwd~~ 133 (151)
.||...
T Consensus 597 sl~~~~ 602 (764)
T KOG1063|consen 597 SLYEVQ 602 (764)
T ss_pred Eeeeee
Confidence 999875
No 250
>KOG1240|consensus
Probab=95.70 E-value=0.25 Score=46.66 Aligned_cols=125 Identities=13% Similarity=0.029 Sum_probs=80.0
Q ss_pred CceeeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEee-e---CC-EEEEEeC-CeEEEE
Q psy16020 16 DTALPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAA-V---YN-KVWCGYK-NKIHVV 86 (151)
Q Consensus 16 ~~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~-v---~~-~Lw~g~~-n~I~vi 86 (151)
..+.++.. ..+++-+|..||.|.+++.+....-............ ...++..|.- . .. .|-.+.. +.|..|
T Consensus 1099 sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~ 1178 (1431)
T KOG1240|consen 1099 SRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSW 1178 (1431)
T ss_pred CceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEe
Confidence 45655544 4557888999999999998742100000000111111 1255555544 2 24 3445554 689999
Q ss_pred eCCCCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeCCccceeeeE
Q psy16020 87 DPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 87 d~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~~t~~~l~~i 141 (151)
|+.+....-+++ ++.....|+.++.++.+-| +.+...|.+-+||.+-..++...
T Consensus 1179 D~r~~~~~w~lk-~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw 1233 (1431)
T KOG1240|consen 1179 DTRMRHDAWRLK-NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSW 1233 (1431)
T ss_pred cchhhhhHHhhh-cCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecc
Confidence 999988777777 3344678999999977665 66777999999999966665544
No 251
>PHA02713 hypothetical protein; Provisional
Probab=95.62 E-value=0.16 Score=44.42 Aligned_cols=66 Identities=8% Similarity=0.100 Sum_probs=46.8
Q ss_pred EEeeeCCEEEEEeC--------CeEEEEeCCC-CcE--EEEEEecCCCCCceeEEEEeCCEEEEEEcCCC--eEEEEeCC
Q psy16020 67 SLAAVYNKVWCGYK--------NKIHVVDPKS-LVV--LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS--TLRMYNAH 133 (151)
Q Consensus 67 ~m~~v~~~Lw~g~~--------n~I~vid~~t-~~i--~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~--~l~lwd~~ 133 (151)
+++..+++||+-.| +.+..+|+++ .+= ...+.. ...-..++..++.+++.++.++ .+..||..
T Consensus 458 ~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~----~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~ 533 (557)
T PHA02713 458 GVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTES----RLSALHTILHDNTIMMLHCYESYMLQDTFNVY 533 (557)
T ss_pred cEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCc----ccccceeEEECCEEEEEeeecceeehhhcCcc
Confidence 57778999997654 2478999997 442 233321 2355677777999999999888 78888888
Q ss_pred ccc
Q psy16020 134 TYQ 136 (151)
Q Consensus 134 t~~ 136 (151)
|.+
T Consensus 534 ~~~ 536 (557)
T PHA02713 534 TYE 536 (557)
T ss_pred ccc
Confidence 754
No 252
>KOG4190|consensus
Probab=95.62 E-value=0.063 Score=46.95 Aligned_cols=131 Identities=12% Similarity=0.107 Sum_probs=94.0
Q ss_pred CCCCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCC-----CCCCCcceEEEeCCCCCceEEEeeeCCE-
Q psy16020 2 EYPHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDG-----QWDLSKYHTVTLGLPHHSVRSLAAVYNK- 74 (151)
Q Consensus 2 ~~~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-----~wd~~~~~~i~l~~~~~pV~~m~~v~~~- 74 (151)
|+-+.+|-+..+-. .+|.+|-+....-+++.-||-|-+|+.-.+. .|+.+ -| ...-|.|+.-++..
T Consensus 770 ~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk------~~-a~~~ikcl~nv~~~i 842 (1034)
T KOG4190|consen 770 EIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPK------EG-AGGNIKCLENVDRHI 842 (1034)
T ss_pred ccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCcc------cC-CCceeEecccCcchh
Confidence 45556677777644 6899998887766788889999999864221 12211 11 12678888888876
Q ss_pred EEEEeC--CeEEEEeCCCCcEEEEEEec--CCCCCceeEEEEeCCEEEEEEcC-CCeEEEEeCCccceee
Q psy16020 75 VWCGYK--NKIHVVDPKSLVVLKSFDAH--PRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 75 Lw~g~~--n~I~vid~~t~~i~~~~~~h--~~~~~~I~~m~~~~~~vwis~~~-d~~l~lwd~~t~~~l~ 139 (151)
|-+||. .+|+.+|+++.+-...+.+. +-+...+.++++.+.|-|++..- .+.|-.-|+++++.+.
T Consensus 843 liAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vIN 912 (1034)
T KOG4190|consen 843 LIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVIN 912 (1034)
T ss_pred eeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceec
Confidence 667873 68999999999988888766 33446799999998888866554 5678888888887654
No 253
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=95.59 E-value=1 Score=36.70 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=75.6
Q ss_pred CCceeeeEE--eCCeEEEEec----CCcEEEEEcCCC-CCCCCCcceEEE-eCCCCCceEEEee--eCCEEEEEe--CCe
Q psy16020 15 LDTALPPVH--VQGRVVCALA----DGSVAIFRRGPD-GQWDLSKYHTVT-LGLPHHSVRSLAA--VYNKVWCGY--KNK 82 (151)
Q Consensus 15 ~~~V~~i~~--~~~~v~vgl~----nG~l~v~~~~~~-~~wd~~~~~~i~-l~~~~~pV~~m~~--v~~~Lw~g~--~n~ 82 (151)
......|.. .+++||+... +|.|..|+...+ |.. +....+. .|. .|+. +.+ -++.|+++. ++.
T Consensus 36 ~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L--~~~~~~~~~g~--~p~~-i~~~~~g~~l~vany~~g~ 110 (345)
T PF10282_consen 36 GENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTL--TLLNSVPSGGS--SPCH-IAVDPDGRFLYVANYGGGS 110 (345)
T ss_dssp SSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEE--EEEEEEEESSS--CEEE-EEECTTSSEEEEEETTTTE
T ss_pred CCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCccee--EEeeeeccCCC--CcEE-EEEecCCCEEEEEEccCCe
Confidence 345555555 5668999987 579999998765 432 2223344 333 6664 333 246799987 578
Q ss_pred EEEEeCCC-CcEEEEEE--ec----C----CCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccc
Q psy16020 83 IHVVDPKS-LVVLKSFD--AH----P----RRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 83 I~vid~~t-~~i~~~~~--~h----~----~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~ 136 (151)
|.+++... +++..... .| + ......+++..+++ .+|++......|++|+.....
T Consensus 111 v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~ 177 (345)
T PF10282_consen 111 VSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDT 177 (345)
T ss_dssp EEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS
T ss_pred EEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCC
Confidence 99998875 66555422 12 1 12346889988855 678888888899999997643
No 254
>KOG1310|consensus
Probab=95.51 E-value=0.092 Score=45.79 Aligned_cols=74 Identities=16% Similarity=0.229 Sum_probs=58.8
Q ss_pred eCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCCCCcEEEEEE-ecCCCCCceeEEEEe---CCEEEEEEcCCCeEEEE
Q psy16020 58 LGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSLVVLKSFD-AHPRRESQVRQMTWA---GDGVWVSIRLDSTLRMY 130 (151)
Q Consensus 58 l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~t~~i~~~~~-~h~~~~~~I~~m~~~---~~~vwis~~~d~~l~lw 130 (151)
|-.++.=|+|+.-.. +-|.-|+++ ++.|||+-..|....+. +|+. .|++.++. ++.+.+|+..|..|+||
T Consensus 46 L~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHta---NIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 46 LTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTA---NIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred hccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeeccccc---ceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 334568899999975 335556655 79999999999888876 5764 78888877 67889999999999999
Q ss_pred eCCc
Q psy16020 131 NAHT 134 (151)
Q Consensus 131 d~~t 134 (151)
|...
T Consensus 123 dl~~ 126 (758)
T KOG1310|consen 123 DLDS 126 (758)
T ss_pred eccc
Confidence 9985
No 255
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=95.49 E-value=1.1 Score=36.48 Aligned_cols=127 Identities=16% Similarity=0.144 Sum_probs=79.9
Q ss_pred CceeeeEE--eCCeEEEEe-cCCcEEEEEcCCCCCCCCCcc-eEEEe---CC-----CCCceEEEeee--CCEEEEEe-C
Q psy16020 16 DTALPPVH--VQGRVVCAL-ADGSVAIFRRGPDGQWDLSKY-HTVTL---GL-----PHHSVRSLAAV--YNKVWCGY-K 80 (151)
Q Consensus 16 ~~V~~i~~--~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~-~~i~l---~~-----~~~pV~~m~~v--~~~Lw~g~-~ 80 (151)
...-.|.. .++++|++- .+|++.+|+.+.+|.- ... ..+.. +. ...-..++.+. ++.||+.. |
T Consensus 87 ~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l--~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG 164 (345)
T PF10282_consen 87 SSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSL--GEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG 164 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEE--EEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred CCcEEEEEecCCCEEEEEEccCCeEEEEEccCCccc--ceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence 44445555 355799986 5899999999876521 111 11211 10 01234566665 36799887 3
Q ss_pred -CeEEEEeCCCC--cEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCC----ccceeeeEeCC
Q psy16020 81 -NKIHVVDPKSL--VVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH----TYQHLQDVDIE 144 (151)
Q Consensus 81 -n~I~vid~~t~--~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~----t~~~l~~idi~ 144 (151)
++|++++.+.. ++...-.........-++|++.++ -+++....++.|.+|+.. +++.++.+..-
T Consensus 165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~ 237 (345)
T PF10282_consen 165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTL 237 (345)
T ss_dssp TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESC
T ss_pred CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeec
Confidence 68888887643 354432222334567999999866 568999999999999998 56677777654
No 256
>KOG0650|consensus
Probab=95.42 E-value=0.03 Score=49.02 Aligned_cols=111 Identities=16% Similarity=0.180 Sum_probs=82.5
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCC-
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPK- 89 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~- 89 (151)
..|.+.+|++- ++|||+.+ .|.+|+.... ...+.+.-|. .=|..|++. ++.|.+|+ ++++..+|..
T Consensus 567 G~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kq-----elvKkL~tg~--kwiS~msihp~GDnli~gs~d~k~~WfDldl 638 (733)
T KOG0650|consen 567 GLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQ-----ELVKKLLTGS--KWISSMSIHPNGDNLILGSYDKKMCWFDLDL 638 (733)
T ss_pred CceeEEEecCCCceEEEEecc-ceEEEehhHH-----HHHHHHhcCC--eeeeeeeecCCCCeEEEecCCCeeEEEEccc
Confidence 57888888765 69999955 8999987521 1222223333 567788886 48888888 6799999987
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccce
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~ 137 (151)
+-+.-+++.-|++ .++.+++-+. .++.|++.|+++.+||.+=|.-
T Consensus 639 sskPyk~lr~H~~---avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~D 684 (733)
T KOG0650|consen 639 SSKPYKTLRLHEK---AVRSVAFHKRYPLFASGSDDGTVIVFHGMVYND 684 (733)
T ss_pred CcchhHHhhhhhh---hhhhhhhccccceeeeecCCCcEEEEeeeeehh
Confidence 5668888888876 6777776644 5689999999999999986543
No 257
>KOG2079|consensus
Probab=95.41 E-value=0.12 Score=48.00 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=73.8
Q ss_pred CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCC
Q psy16020 15 LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSL 91 (151)
Q Consensus 15 ~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~ 91 (151)
+..+.+..+...-+-+|.+-|+++.++.. |++... +-.. ..+.||+|+++.. ..+-+|.+ |-|.+||..+.
T Consensus 89 ~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~----~nL~~~-~~ne-~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~ 162 (1206)
T KOG2079|consen 89 AAGVISSAIVVVPIVIGTSHGHVLLSDMT----GNLGPL-HQNE-RVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA 162 (1206)
T ss_pred CcceeeeeeeeeeEEEEcCchhhhhhhhh----cccchh-hcCC-ccCCcceeeEecCCCceeccccCCCcEEEEEccCC
Confidence 34566667777778899999999998864 443320 1011 1359999999973 45778875 68999999999
Q ss_pred cEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCe
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDST 126 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~ 126 (151)
++.+.+.-|.-+...|....+. ++.+.++..+.|.
T Consensus 163 k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 163 KILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred cceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 9999988776555554444444 4455778888776
No 258
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=95.31 E-value=0.11 Score=28.59 Aligned_cols=30 Identities=17% Similarity=0.251 Sum_probs=25.6
Q ss_pred CCEEEEEeC--CeEEEEeCCCCcEEEEEEecC
Q psy16020 72 YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHP 101 (151)
Q Consensus 72 ~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~ 101 (151)
+++||+++. ++|.++|+.++++.+++....
T Consensus 3 ~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~ 34 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVIDTATNKVIATIPVGG 34 (42)
T ss_pred CCEEEEEeCCCCEEEEEECCCCeEEEEEECCC
Confidence 467999994 799999999999999998753
No 259
>KOG4499|consensus
Probab=95.29 E-value=0.77 Score=36.43 Aligned_cols=49 Identities=14% Similarity=0.309 Sum_probs=39.9
Q ss_pred CCEEEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EE-EEEEcC
Q psy16020 72 YNKVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GV-WVSIRL 123 (151)
Q Consensus 72 ~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~v-wis~~~ 123 (151)
++.||+++ +++|+-+|+.|+++++++.--++ +|++-++.|. .+ ++++.+
T Consensus 222 eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~---qitsccFgGkn~d~~yvT~aa 275 (310)
T KOG4499|consen 222 EGNLYVATFNGGTVQKVDPTTGKILLEIKLPTP---QITSCCFGGKNLDILYVTTAA 275 (310)
T ss_pred CCcEEEEEecCcEEEEECCCCCcEEEEEEcCCC---ceEEEEecCCCccEEEEEehh
Confidence 57899999 46999999999999999997765 8999999877 33 455443
No 260
>KOG4714|consensus
Probab=95.18 E-value=0.058 Score=43.02 Aligned_cols=117 Identities=17% Similarity=0.178 Sum_probs=64.4
Q ss_pred CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEE-EeC--CeEEEEeCCCC
Q psy16020 15 LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC-GYK--NKIHVVDPKSL 91 (151)
Q Consensus 15 ~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~-g~~--n~I~vid~~t~ 91 (151)
|+|-....-..+.|.+|.+||.+++|+-.. ++.....++.-....-=+|..-..+-|-. +|| |.+=-+-+.++
T Consensus 91 p~p~~~~s~~~t~V~~~~~dg~~~v~s~~~----~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~ 166 (319)
T KOG4714|consen 91 IDPNDACTMTDNRVCIGYADGSLAVFSTDK----DLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTL 166 (319)
T ss_pred CCCcccccccCCceEecCCCceEEEEechH----HHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecc
Confidence 356666666678999999999999998642 22222222211100011121112222211 122 11111113456
Q ss_pred cEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCcc
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~ 135 (151)
+.+++|-...-....|+++... .+.+.+.+.+|+.+-|||++..
T Consensus 167 ~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~ 212 (319)
T KOG4714|consen 167 DPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNV 212 (319)
T ss_pred cccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccc
Confidence 6666666544344457777766 4466889999999999999853
No 261
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=95.11 E-value=1.6 Score=36.19 Aligned_cols=127 Identities=15% Similarity=0.081 Sum_probs=86.2
Q ss_pred CCCceeeeeeCCCceeeeEEe--CCeEEEEec---CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEE
Q psy16020 4 PHPTPYPLNKILDTALPPVHV--QGRVVCALA---DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVW 76 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~--~~~v~vgl~---nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw 76 (151)
.+.++++++.+......+.+. ++++||+-+ ++++.+++.... .....+..|. .| ..+++- ++++|
T Consensus 104 ~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~-----~~~~~~~vG~--~P-~~~a~~p~g~~vy 175 (381)
T COG3391 104 ATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN-----KVTATIPVGN--TP-TGVAVDPDGNKVY 175 (381)
T ss_pred cccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCC-----eEEEEEecCC--Cc-ceEEECCCCCeEE
Confidence 456778888888777777664 568999998 578888876421 2223467776 67 555553 57799
Q ss_pred EEe--CCeEEEEeCCCCcEEE-----EEEecCCCCCceeEEEEeCCEEEEEEcCC--CeEEEEeCCccceeee
Q psy16020 77 CGY--KNKIHVVDPKSLVVLK-----SFDAHPRRESQVRQMTWAGDGVWVSIRLD--STLRMYNAHTYQHLQD 140 (151)
Q Consensus 77 ~g~--~n~I~vid~~t~~i~~-----~~~~h~~~~~~I~~m~~~~~~vwis~~~d--~~l~lwd~~t~~~l~~ 140 (151)
+.. .|.|.++|+.+..+.+ ....... -.-..+...|..++++...+ ..+...|+.+......
T Consensus 176 v~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~--P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~ 246 (381)
T COG3391 176 VTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTG--PAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT 246 (381)
T ss_pred EEecCCCeEEEEeCCCcceeccccccccccCCC--CceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe
Confidence 998 5899999988888775 1222221 12333333466778887777 6899999998776665
No 262
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=94.91 E-value=0.21 Score=43.43 Aligned_cols=66 Identities=20% Similarity=0.235 Sum_probs=50.3
Q ss_pred CceEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCC
Q psy16020 63 HSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~ 133 (151)
.+|.|.+.. +++|-.||. +.|.+||..+...+.. . + .-..+.+++-++ .+.+.+++.|.|.+||..
T Consensus 260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-k-a---~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 260 SQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-K-A---EFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred CcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-e-e---cccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 678888886 477999994 6999999987654433 2 2 136777888755 458899999999999987
No 263
>KOG0974|consensus
Probab=94.90 E-value=0.36 Score=44.48 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=68.8
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CC-EEEEEeCC-eEEEEeCCCCcEEE-EEEecCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YN-KVWCGYKN-KIHVVDPKSLVVLK-SFDAHPR 102 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~-~Lw~g~~n-~I~vid~~t~~i~~-~~~~h~~ 102 (151)
++.+|++-|.|.+|....+. .| . .+-.+...|-.|... ++ .+...+++ .|.+|+.+|.+... +-=+|+.
T Consensus 147 ~i~~gsv~~~iivW~~~~dn-----~p-~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsa 219 (967)
T KOG0974|consen 147 YIASGSVFGEIIVWKPHEDN-----KP-I-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSA 219 (967)
T ss_pred EEEeccccccEEEEeccccC-----Cc-c-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccc
Confidence 68888899999999886321 22 2 333345888888885 34 45555566 69999999999877 4445864
Q ss_pred CCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 103 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 103 ~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
.|-.....++ -.++.+.|.+.++|+..
T Consensus 220 ---Rvw~~~~~~n-~i~t~gedctcrvW~~~ 246 (967)
T KOG0974|consen 220 ---RVWACCFLPN-RIITVGEDCTCRVWGVN 246 (967)
T ss_pred ---eeEEEEeccc-eeEEeccceEEEEEecc
Confidence 5555556566 68899999999999544
No 264
>KOG4227|consensus
Probab=94.75 E-value=0.57 Score=39.57 Aligned_cols=116 Identities=10% Similarity=0.038 Sum_probs=80.1
Q ss_pred eeeeEEeC-Ce-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CC-CceEEEeee-CC-EEEEEe-CCeEEEEeCCC
Q psy16020 18 ALPPVHVQ-GR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PH-HSVRSLAAV-YN-KVWCGY-KNKIHVVDPKS 90 (151)
Q Consensus 18 V~~i~~~~-~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~-~pV~~m~~v-~~-~Lw~g~-~n~I~vid~~t 90 (151)
|..|.+.. ++ +..|..|-.+.+|.... .---..|+.|.+-. +. +.|.|+++. ++ .||-|- +++|..-|.+|
T Consensus 59 iNAlqFS~N~~~L~SGGDD~~~~~W~~de--~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt 136 (609)
T KOG4227|consen 59 INALQFSHNDRFLASGGDDMHGRVWNVDE--LMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIET 136 (609)
T ss_pred cceeeeccCCeEEeecCCcceeeeechHH--HHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeeccc
Confidence 44444433 34 44444445677775431 11113556666643 33 789999996 44 488776 46899999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~ 136 (151)
.+....+. |.+....|..|...+. ..+++..+++.+.+||.+..+
T Consensus 137 ~qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 137 KQSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred ceeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 99888876 7776678999988854 569999999999999999755
No 265
>KOG0322|consensus
Probab=94.73 E-value=0.14 Score=40.92 Aligned_cols=122 Identities=12% Similarity=0.117 Sum_probs=72.2
Q ss_pred CceeeeEE--e-CC--eEEEEecCCcEEEEEcCCCCCCCCCcceEE----EeCCCCCceEEEeeeC--CEEEEEe-CCeE
Q psy16020 16 DTALPPVH--V-QG--RVVCALADGSVAIFRRGPDGQWDLSKYHTV----TLGLPHHSVRSLAAVY--NKVWCGY-KNKI 83 (151)
Q Consensus 16 ~~V~~i~~--~-~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i----~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I 83 (151)
++|+|... . +. .+.+|-.+|.+..|+.+.+ .--++.|..- ....+++||.++.+-. ++=-.|+ +.++
T Consensus 151 gsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~-~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl 229 (323)
T KOG0322|consen 151 GSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTG-DKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKL 229 (323)
T ss_pred CceeeeeccccccceEEEEEeccCCeEEEEEccCC-ceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccc
Confidence 36777752 1 12 3778889999999998642 1112222111 2223468999988853 3323344 3455
Q ss_pred EEEeC--CCCcEE--EEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 84 HVVDP--KSLVVL--KSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 84 ~vid~--~t~~i~--~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
..|+. .+++.. ++++.. +. .|..+..- ...++.+.+-|..||+|+.+|.++|.-+
T Consensus 230 ~~~Sl~~s~gslq~~~e~~lk-np--Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVL 289 (323)
T KOG0322|consen 230 VMYSLNHSTGSLQIRKEITLK-NP--GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVL 289 (323)
T ss_pred eeeeeccccCcccccceEEec-CC--CccceEEccCCcEEeecccCCcEEEEEeccCCchhhh
Confidence 55553 344433 333322 21 34444333 4567999999999999999999998754
No 266
>KOG0882|consensus
Probab=94.71 E-value=0.3 Score=41.69 Aligned_cols=119 Identities=13% Similarity=0.168 Sum_probs=77.4
Q ss_pred eeEEeCC----eEEEEecC-CcEEEEEcCCCCCCCCCcceE-EEeCCCCCceEEEeeeC--CE-EEEEeCCeEEEEeCC-
Q psy16020 20 PPVHVQG----RVVCALAD-GSVAIFRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAAVY--NK-VWCGYKNKIHVVDPK- 89 (151)
Q Consensus 20 ~i~~~~~----~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~-i~l~~~~~pV~~m~~v~--~~-Lw~g~~n~I~vid~~- 89 (151)
++.|.++ .|-|++.+ |.+-||+-..++ .++.. .++. .+||.+|-++. +. +-..-++.|--|.++
T Consensus 102 ~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~----~q~~~fkklH--~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~ 175 (558)
T KOG0882|consen 102 EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDF----CQDGYFKKLH--FSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG 175 (558)
T ss_pred EEecCCCCeeeeEEeecccCCCcEEECCcCCc----Cccceecccc--cCceEEEEeeccccceeeccccceeEeecCCC
Confidence 3445566 56666654 778888755433 22222 2343 49999999973 33 222235789889877
Q ss_pred CCcEEEE-----------EEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 90 SLVVLKS-----------FDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 90 t~~i~~~-----------~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.+|--++ +.+.........++.++..+- |-....|..||.++..|+++.|+||=.
T Consensus 176 ~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~ 242 (558)
T KOG0882|consen 176 PFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEV 242 (558)
T ss_pred cccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhcc
Confidence 3432222 112222234678888888777 889999999999999999999999843
No 267
>KOG2315|consensus
Probab=94.68 E-value=1 Score=39.28 Aligned_cols=115 Identities=17% Similarity=0.232 Sum_probs=76.9
Q ss_pred eeeCC--CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCE-EEEEeCC
Q psy16020 11 LNKIL--DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNK-VWCGYKN 81 (151)
Q Consensus 11 ~i~l~--~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~-Lw~g~~n 81 (151)
+++|+ .+|.|.....+ -|.-|-.=.++++|+..- --.+.++. .|=++|.+. ++- +.||-||
T Consensus 264 ~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~--------~~v~df~e--gpRN~~~fnp~g~ii~lAGFGN 333 (566)
T KOG2315|consen 264 SVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG--------KPVFDFPE--GPRNTAFFNPHGNIILLAGFGN 333 (566)
T ss_pred EEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC--------CEeEeCCC--CCccceEECCCCCEEEEeecCC
Confidence 45566 68888888654 255555556788887642 12456665 898999986 344 5677775
Q ss_pred ---eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEc------CCCeEEEEeCCccceeeeE
Q psy16020 82 ---KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIR------LDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 82 ---~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~------~d~~l~lwd~~t~~~l~~i 141 (151)
.|-|||..+.+...++++-. ..+.. ++++|-| +++. -|+-+++||.. +..+.+-
T Consensus 334 L~G~mEvwDv~n~K~i~~~~a~~---tt~~e--W~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~ 397 (566)
T KOG2315|consen 334 LPGDMEVWDVPNRKLIAKFKAAN---TTVFE--WSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEK 397 (566)
T ss_pred CCCceEEEeccchhhccccccCC---ceEEE--EcCCCcEEEEEeccccEEecCCeEEEEec-Cceeehh
Confidence 79999999999999999763 34554 5555543 2322 37789999986 5555443
No 268
>KOG0650|consensus
Probab=94.66 E-value=0.064 Score=47.01 Aligned_cols=50 Identities=22% Similarity=0.403 Sum_probs=42.0
Q ss_pred EEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020 97 FDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK 149 (151)
Q Consensus 97 ~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~~t~~~l~~idi~~~v~~ 149 (151)
+.+|+. .|.++.....|-| .|++.|++||+|-..|+.++..+.+...+.+
T Consensus 396 yrGHtg---~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~ 446 (733)
T KOG0650|consen 396 YRGHTG---LVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRS 446 (733)
T ss_pred EeccCC---eEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEE
Confidence 568875 8999999977775 6889999999999999999999887665543
No 269
>KOG2139|consensus
Probab=94.62 E-value=1 Score=37.60 Aligned_cols=121 Identities=13% Similarity=0.138 Sum_probs=78.1
Q ss_pred ceeeeeeCC--CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCC----cceEEEeC-C-CCCceEEEeeeC-CE
Q psy16020 7 TPYPLNKIL--DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLS----KYHTVTLG-L-PHHSVRSLAAVY-NK 74 (151)
Q Consensus 7 ~~l~~i~l~--~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~----~~~~i~l~-~-~~~pV~~m~~v~-~~ 74 (151)
+|-..+|-+ ..|.|+.+.+. .+-||. -+-|++|..+.-+.-+.. .-...++. + -+.||++|.-.+ +.
T Consensus 130 t~pt~Lks~sQrnvtclawRPlsaselavgC-r~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt 208 (445)
T KOG2139|consen 130 TCPTKLKSVSQRNVTCLAWRPLSASELAVGC-RAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGT 208 (445)
T ss_pred CCCceecchhhcceeEEEeccCCcceeeeee-cceeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCC
Confidence 555666644 58999999764 577787 566899976532211110 00111111 1 139999999985 44
Q ss_pred EEEE-e-CC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEe
Q psy16020 75 VWCG-Y-KN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYN 131 (151)
Q Consensus 75 Lw~g-~-~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd 131 (151)
.|+. + ++ .|.|||+++++...-. ..+...+..+..+++|= +.+.+-|+.-+||+
T Consensus 209 ~l~tAS~gsssi~iWdpdtg~~~pL~---~~glgg~slLkwSPdgd~lfaAt~davfrlw~ 266 (445)
T KOG2139|consen 209 ILVTASFGSSSIMIWDPDTGQKIPLI---PKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQ 266 (445)
T ss_pred EEeecccCcceEEEEcCCCCCccccc---ccCCCceeeEEEcCCCCEEEEecccceeeeeh
Confidence 5543 3 54 7999999998854433 22345789999997765 56777799999993
No 270
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=94.59 E-value=1 Score=31.31 Aligned_cols=88 Identities=17% Similarity=0.273 Sum_probs=58.4
Q ss_pred CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCC
Q psy16020 26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRR 103 (151)
Q Consensus 26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~ 103 (151)
+.|+||..|..|.||+-. +. ..++.. ...|.+|...+ ++...|-.| +|=|++-. ++-+-..+
T Consensus 16 ~eLlvGs~D~~IRvf~~~-------e~--~~Ei~e-~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~----~RlWRiKS-- 79 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD-------EI--VAEITE-TDKVTSLCSLGGGRFAYALANGTVGVYDRS----QRLWRIKS-- 79 (111)
T ss_pred ceEEEecCCcEEEEEeCC-------cE--EEEEec-ccceEEEEEcCCCEEEEEecCCEEEEEeCc----ceeeeecc--
Confidence 579999999999999853 12 223433 26788888875 666666664 89999762 23333332
Q ss_pred CCceeEEEEe---CCEE--EEEEcCCCeEEE
Q psy16020 104 ESQVRQMTWA---GDGV--WVSIRLDSTLRM 129 (151)
Q Consensus 104 ~~~I~~m~~~---~~~v--wis~~~d~~l~l 129 (151)
..++++|... ++|+ +|++..++.|.+
T Consensus 80 K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 80 KNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 2367777766 5555 888888887753
No 271
>KOG0280|consensus
Probab=94.58 E-value=0.34 Score=39.25 Aligned_cols=113 Identities=19% Similarity=0.224 Sum_probs=69.2
Q ss_pred CceeeeEEe----CC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceE-EEee----eCCEEEEEeC-CeE
Q psy16020 16 DTALPPVHV----QG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVR-SLAA----VYNKVWCGYK-NKI 83 (151)
Q Consensus 16 ~~V~~i~~~----~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~-~m~~----v~~~Lw~g~~-n~I 83 (151)
+.+++|+.. ++ .+..+-+.|.|-+|+..... +....-.|...+..+. ++.+ .+.+++++-. +++
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~----ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~ 145 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDE----SSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSI 145 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccce----eeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcE
Confidence 356666553 22 36677788999999875321 1222223333223333 2222 2467888864 688
Q ss_pred EEEeCCCCcEEE--EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 84 HVVDPKSLVVLK--SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 84 ~vid~~t~~i~~--~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
.+++-..+.+++ ++++|.- +.=+-....-...+..++++|+.+..||.+
T Consensus 146 ~~v~~t~~~le~vq~wk~He~-E~Wta~f~~~~pnlvytGgDD~~l~~~D~R 196 (339)
T KOG0280|consen 146 SGVYETEMVLEKVQTWKVHEF-EAWTAKFSDKEPNLVYTGGDDGSLSCWDIR 196 (339)
T ss_pred EEEecceeeeeecccccccce-eeeeeecccCCCceEEecCCCceEEEEEec
Confidence 888888777777 8888853 111222222244667799999999999999
No 272
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=94.54 E-value=2.4 Score=39.56 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=80.5
Q ss_pred CCCCCceeeeeeCCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceE---EEe--------CCCCCceEEE
Q psy16020 2 EYPHPTPYPLNKILDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHT---VTL--------GLPHHSVRSL 68 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~---i~l--------~~~~~pV~~m 68 (151)
.+|=|=+..++++|++|.++.+..+. +.+-++||+|.+|.+.....|....|.. +.. ......++.+
T Consensus 413 ~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (928)
T PF04762_consen 413 VVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQL 492 (928)
T ss_pred CCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEE
Confidence 46667788999999999999997665 9999999999999987666664433322 111 1123567777
Q ss_pred eeeC-CEEEEEe-C----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020 69 AAVY-NKVWCGY-K----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH 133 (151)
Q Consensus 69 ~~v~-~~Lw~g~-~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~ 133 (151)
...+ +.+.+-. . +.|.+++....+...........+..+......+..- ++.-..+|.+...+..
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~ 564 (928)
T PF04762_consen 493 AWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSD 564 (928)
T ss_pred EEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecC
Confidence 7775 5544333 2 3677777643332222222222233555555554432 4555557777655544
No 273
>KOG2114|consensus
Probab=94.52 E-value=1.5 Score=40.18 Aligned_cols=135 Identities=10% Similarity=0.061 Sum_probs=82.2
Q ss_pred CCcee--eee---eCC---CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C
Q psy16020 5 HPTPY--PLN---KIL---DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N 73 (151)
Q Consensus 5 ~~~~l--~~i---~l~---~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~ 73 (151)
+|+|+ +++ +.| .++.+|.-+ -+.+.+|.+||.|..|+=+. .=|-.....+.. ..+.||+.+++.. .
T Consensus 107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi--~RDrgsr~~~~~-~~~~pITgL~~~~d~ 183 (933)
T KOG2114|consen 107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDI--LRDRGSRQDYSH-RGKEPITGLALRSDG 183 (933)
T ss_pred CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcc--hhccccceeeec-cCCCCceeeEEecCC
Confidence 37888 222 233 244444433 34799999999999985321 001111111222 1249999999964 2
Q ss_pred --EEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 74 --KVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 74 --~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.|+++.-++|.++... ++- -..+.+.+.+.+++|-..+...-=+-+.++..|.+||+..-.+...+++.
T Consensus 184 ~s~lFv~Tt~~V~~y~l~-gr~-p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~~~~cfaf~~g 254 (933)
T KOG2114|consen 184 KSVLFVATTEQVMLYSLS-GRT-PSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYDSDGRGPCFAFEVG 254 (933)
T ss_pred ceeEEEEecceeEEEEec-CCC-cceeeeccCCccceeeecCCCCccEEEecCceEEEEcCCCcceeeeecCC
Confidence 3799999988888776 333 22222333346888888774432235667888999999987777777643
No 274
>PRK02888 nitrous-oxide reductase; Validated
Probab=94.38 E-value=0.53 Score=41.83 Aligned_cols=120 Identities=9% Similarity=0.019 Sum_probs=77.7
Q ss_pred CCCceeeeeeCCCce--eeeEEeCCeEEEEecC----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEE
Q psy16020 4 PHPTPYPLNKILDTA--LPPVHVQGRVVCALAD----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC 77 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V--~~i~~~~~~v~vgl~n----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~ 77 (151)
.+.+..|+|.++... ..+-+.++++|+..-| +++...+.+. ....+.+.- .-+......++..|+
T Consensus 223 etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e-------~d~~vvfni--~~iea~vkdGK~~~V 293 (635)
T PRK02888 223 ETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAE-------RDWVVVFNI--ARIEEAVKAGKFKTI 293 (635)
T ss_pred ccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeecccc-------CceEEEEch--HHHHHhhhCCCEEEE
Confidence 345677888887533 2334456688888632 3566665431 112333322 222233333566777
Q ss_pred EeCCeEEEEeCCC-----CcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccce
Q psy16020 78 GYKNKIHVVDPKS-----LVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 78 g~~n~I~vid~~t-----~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~ 137 (151)
+ +|+|.|+|..+ .++.+.+..-. ..+.+..+++| ++++...|+++-+.|+++.+.
T Consensus 294 ~-gn~V~VID~~t~~~~~~~v~~yIPVGK----sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~ 355 (635)
T PRK02888 294 G-GSKVPVVDGRKAANAGSALTRYVPVPK----NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD 355 (635)
T ss_pred C-CCEEEEEECCccccCCcceEEEEECCC----CccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence 4 78999999999 67888888653 67778888665 477888899999999998764
No 275
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=94.29 E-value=0.2 Score=29.33 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=31.5
Q ss_pred eeeeeeCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCC
Q psy16020 8 PYPLNKILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQW 48 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~w 48 (151)
.+..=.+++.|.++.+++. -+-+|..+|.|.+|+.+-...|
T Consensus 4 ~~~~k~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~qriw 46 (47)
T PF12894_consen 4 QLGEKNLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLNWQRIW 46 (47)
T ss_pred eecccCCCCcEEEEEECCCCCEEEEEECCCeEEEEECCCcCcc
Confidence 3445568889999999876 4889999999999998533333
No 276
>PHA03098 kelch-like protein; Provisional
Probab=94.23 E-value=1.3 Score=38.00 Aligned_cols=120 Identities=13% Similarity=0.079 Sum_probs=68.1
Q ss_pred ceeeeeeCCCceeeeEEeCCeEEEEecC-------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020 7 TPYPLNKILDTALPPVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~~~v~vgl~n-------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~ 79 (151)
+.+..+..|-.-.+....++++|+.++- ..+-.|+.. .+.|..-.+ ++.+ ..-.++...+++||+-.
T Consensus 371 ~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~--~p~~---r~~~~~~~~~~~iyv~G 444 (534)
T PHA03098 371 REEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLN-TNKWSKGSP--LPIS---HYGGCAIYHDGKIYVIG 444 (534)
T ss_pred eeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCC-CCeeeecCC--CCcc---ccCceEEEECCEEEEEC
Confidence 3333343443334455678899987651 246777654 356753221 1111 11235677789988765
Q ss_pred C----------CeEEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCcc
Q psy16020 80 K----------NKIHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY 135 (151)
Q Consensus 80 ~----------n~I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~ 135 (151)
| +.++++|+++.+-...-.. .++ .-..+...++.+++.++.+ +.+..||..+.
T Consensus 445 G~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 445 GISYIDNIKVYNIVESYNPVTNKWTELSSLNFPR---INASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred CccCCCCCcccceEEEecCCCCceeeCCCCCccc---ccceEEEECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 4 2399999998764332111 111 2223444578888777654 57899998864
No 277
>KOG1409|consensus
Probab=94.21 E-value=0.5 Score=39.10 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=70.3
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCCCc-EEEEEEecCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKSLV-VLKSFDAHPR 102 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t~~-i~~~~~~h~~ 102 (151)
+.|+|--.|.+..-+....+ .+-...+.++..+++|+.-.+ ..|+-|+ +.+|.+||.--.+ +...+.+|.+
T Consensus 167 ~~fvGd~~gqvt~lr~~~~~-----~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~ 241 (404)
T KOG1409|consen 167 YAFVGDHSGQITMLKLEQNG-----CQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHND 241 (404)
T ss_pred EEEecccccceEEEEEeecC-----CceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchh
Confidence 78888888877776654211 222335555558999998875 4577665 5689999987554 6677888876
Q ss_pred CCCceeEEEEeCC-EEEEEEcCCCeEEEEeCC
Q psy16020 103 RESQVRQMTWAGD-GVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 103 ~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~ 133 (151)
.|+.+.+... .+++|++.|+.|.+||..
T Consensus 242 ---kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 242 ---KVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred ---hhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 6666655533 459999999999999976
No 278
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=94.20 E-value=1.4 Score=37.65 Aligned_cols=133 Identities=13% Similarity=0.123 Sum_probs=63.4
Q ss_pred ceeeeeeCCCceeeeEEe----------------CCeEEE-EecCCcEEEEEcCCCCCCCCCcceEEEeCCC--------
Q psy16020 7 TPYPLNKILDTALPPVHV----------------QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTVTLGLP-------- 61 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~----------------~~~v~v-gl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-------- 61 (151)
+.++++.+|..=..+.|. .+++++ ||-.+.|.||+...+. ..|+..++-.+
T Consensus 53 qVIhrl~mp~~GDElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~SsrIyviD~~~dP----r~P~l~KvIe~~ev~~k~g 128 (461)
T PF05694_consen 53 QVIHRLPMPNRGDELHHSGWNACSSCHYGDPSKERRYLILPGLRSSRIYVIDTKTDP----RKPRLHKVIEPEEVFEKTG 128 (461)
T ss_dssp SEEEEEE-SSS---B---EES--GGSTT--TT--S-EEEEEBTTT--EEEEE--S-T----TS-EEEEEE-HHHHHHHH-
T ss_pred cEEEEEeCCCCCCccccccCcccccccCCCCcccCCcEEeeeeccCcEEEEECCCCC----CCCceEeeeCHHHHHhhcC
Confidence 677888888654555442 335555 5577899999987543 45555443221
Q ss_pred ---CCceEEEeeeCCEEEEEe-----C---CeEEEEeCCCCcEEEEEEecCCCCC---------ceeEEEEeCCEEE---
Q psy16020 62 ---HHSVRSLAAVYNKVWCGY-----K---NKIHVVDPKSLVVLKSFDAHPRRES---------QVRQMTWAGDGVW--- 118 (151)
Q Consensus 62 ---~~pV~~m~~v~~~Lw~g~-----~---n~I~vid~~t~~i~~~~~~h~~~~~---------~I~~m~~~~~~vw--- 118 (151)
.+.++|+. ++++++++ | +.+..+|.+|+++..+++....... .=+.|..+.=|.+
T Consensus 129 ~s~PHT~Hclp--~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~ 206 (461)
T PF05694_consen 129 LSRPHTVHCLP--DGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMF 206 (461)
T ss_dssp EEEEEEEEE-S--S--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHH
T ss_pred CCCCceeeecC--CccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhc
Confidence 14455554 56666665 2 4699999999999999986432111 1112333211111
Q ss_pred ---------EEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 119 ---------VSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 119 ---------is~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
...+-...|.+||.++.+++|.||+-+
T Consensus 207 ~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~ 242 (461)
T PF05694_consen 207 EKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGE 242 (461)
T ss_dssp TT---TTTHHHH-S--EEEEEETTTTEEEEEEES-T
T ss_pred ccCCChhHhhcccccCeEEEEECCCCcEeeEEecCC
Confidence 111247889999999999999999853
No 279
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=94.17 E-value=0.38 Score=39.72 Aligned_cols=57 Identities=18% Similarity=0.262 Sum_probs=43.2
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEE-cCCCeEEEEeCCccceeeeEe
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSI-RLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~-~~d~~l~lwd~~t~~~l~~id 142 (151)
.|.++|++|++..++++.-. .+..|.++.+ -.+++. ..++.|.+||+.|++++.+++
T Consensus 270 eVWv~D~~t~krv~Ri~l~~----~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLEH----PIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EEEEEETTTTEEEEEEEEEE----EESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred EEEEEECCCCeEEEEEeCCC----ccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 59999999999999999532 5777888744 345554 568999999999999999885
No 280
>PHA03098 kelch-like protein; Provisional
Probab=94.13 E-value=1.2 Score=38.17 Aligned_cols=111 Identities=11% Similarity=0.096 Sum_probs=63.7
Q ss_pred eeeeEEeCCeEEEEecCC------cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC--------CeE
Q psy16020 18 ALPPVHVQGRVVCALADG------SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK--------NKI 83 (151)
Q Consensus 18 V~~i~~~~~~v~vgl~nG------~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~--------n~I 83 (151)
-.+....++++|+-++.+ ++-.|+.. .++|....+ ++.. ..-.+++..++++|+..| +.+
T Consensus 335 ~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~--lp~~---r~~~~~~~~~~~iYv~GG~~~~~~~~~~v 408 (534)
T PHA03098 335 NPGVTVFNNRIYVIGGIYNSISLNTVESWKPG-ESKWREEPP--LIFP---RYNPCVVNVNNLIYVIGGISKNDELLKTV 408 (534)
T ss_pred cceEEEECCEEEEEeCCCCCEecceEEEEcCC-CCceeeCCC--cCcC---CccceEEEECCEEEEECCcCCCCcccceE
Confidence 345556788888766532 35566653 456753221 1111 111244567899987654 469
Q ss_pred EEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC--------CeEEEEeCCccc
Q psy16020 84 HVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD--------STLRMYNAHTYQ 136 (151)
Q Consensus 84 ~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d--------~~l~lwd~~t~~ 136 (151)
+++|+.+.+-... ..-+ ....-.+++..++.+++.++.+ +.+..||..+.+
T Consensus 409 ~~yd~~t~~W~~~-~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 409 ECFSLNTNKWSKG-SPLP-ISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred EEEeCCCCeeeec-CCCC-ccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence 9999987654322 1111 1123345666688888877643 248899988643
No 281
>KOG3914|consensus
Probab=93.94 E-value=0.13 Score=42.78 Aligned_cols=79 Identities=16% Similarity=0.133 Sum_probs=58.8
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE-EEEEeC-CeEEEEeCCCC
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK-VWCGYK-NKIHVVDPKSL 91 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~-Lw~g~~-n~I~vid~~t~ 91 (151)
+.++++...++ ++..+=-|+.|.|-+..+ ....+.+.+|. ++=|..|.+.+++ ||-|+| +++++||.+++
T Consensus 152 Sml~dVavS~D~~~IitaDRDEkIRvs~ypa-----~f~IesfclGH-~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sg 225 (390)
T KOG3914|consen 152 SMLLDVAVSPDDQFIITADRDEKIRVSRYPA-----TFVIESFCLGH-KEFVSTISLTDNYLLLSGSGDKTLRLWDITSG 225 (390)
T ss_pred hhhheeeecCCCCEEEEecCCceEEEEecCc-----ccchhhhcccc-HhheeeeeeccCceeeecCCCCcEEEEecccC
Confidence 56667766554 577777788888887652 12334567775 5889999999876 688887 58999999999
Q ss_pred cEEEEEEec
Q psy16020 92 VVLKSFDAH 100 (151)
Q Consensus 92 ~i~~~~~~h 100 (151)
+..+++...
T Consensus 226 k~L~t~dl~ 234 (390)
T KOG3914|consen 226 KLLDTCDLS 234 (390)
T ss_pred Ccccccchh
Confidence 999888744
No 282
>KOG4649|consensus
Probab=93.84 E-value=2.2 Score=34.45 Aligned_cols=107 Identities=19% Similarity=0.204 Sum_probs=72.2
Q ss_pred CCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeC-CeEEEEeCCCCcEEEEEEecC
Q psy16020 25 QGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHP 101 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~ 101 (151)
+-.||+|.-.|.+...+..++. .|.. -+|. .+.|-+. ++|.+-.||- +.+|+++.+||.....|.+-.
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~------ilg~---RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~ 93 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEA------ILGV---RIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE 93 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeeh------hhCc---eeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehh
Confidence 4579999999988887765432 3532 2332 2223222 7999999996 589999999996656666442
Q ss_pred CCCCcee-EEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 102 RRESQVR-QMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 102 ~~~~~I~-~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
. -.+. .|..++.-+| .++.|...+.-|.+++.++.+..+
T Consensus 94 ~--vk~~a~~d~~~glIy-cgshd~~~yalD~~~~~cVykskc 133 (354)
T KOG4649|consen 94 T--VKVRAQCDFDGGLIY-CGSHDGNFYALDPKTYGCVYKSKC 133 (354)
T ss_pred h--hccceEEcCCCceEE-EecCCCcEEEecccccceEEeccc
Confidence 2 1222 2344445556 889999999999999988876443
No 283
>KOG4714|consensus
Probab=93.79 E-value=0.078 Score=42.32 Aligned_cols=88 Identities=17% Similarity=0.168 Sum_probs=59.4
Q ss_pred CCCCCCcceEEEeCC-CCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEE
Q psy16020 46 GQWDLSKYHTVTLGL-PHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWV 119 (151)
Q Consensus 46 ~~wd~~~~~~i~l~~-~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwi 119 (151)
-.|++++.+.+.... .-..|.++.... ..+.||.+ +.|-+||.+.+. +...+.+|+.....|.---..++. +.
T Consensus 162 ~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~-Lf 240 (319)
T KOG4714|consen 162 YANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEH-LF 240 (319)
T ss_pred eeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchh-ee
Confidence 457777766554332 113477777764 45888886 689999999875 344466887644455443344555 66
Q ss_pred EEcCCCeEEEEeCCc
Q psy16020 120 SIRLDSTLRMYNAHT 134 (151)
Q Consensus 120 s~~~d~~l~lwd~~t 134 (151)
++++|+.|--||+.+
T Consensus 241 t~sedGslw~wdas~ 255 (319)
T KOG4714|consen 241 TCSEDGSLWHWDAST 255 (319)
T ss_pred EecCCCcEEEEcCCC
Confidence 999999999999995
No 284
>PHA02790 Kelch-like protein; Provisional
Probab=93.79 E-value=1.8 Score=37.00 Aligned_cols=107 Identities=10% Similarity=0.093 Sum_probs=62.8
Q ss_pred eeeeEEeCCeEEEEec-CC---cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcE
Q psy16020 18 ALPPVHVQGRVVCALA-DG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVV 93 (151)
Q Consensus 18 V~~i~~~~~~v~vgl~-nG---~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i 93 (151)
=.+....++++||-++ ++ ++-.|+.. ...|....+-..+ ..-.+++.++++||+..| ...++|+++.+=
T Consensus 355 ~~~~~~~~g~IYviGG~~~~~~~ve~ydp~-~~~W~~~~~m~~~-----r~~~~~~~~~~~IYv~GG-~~e~ydp~~~~W 427 (480)
T PHA02790 355 NPAVASINNVIYVIGGHSETDTTTEYLLPN-HDQWQFGPSTYYP-----HYKSCALVFGRRLFLVGR-NAEFYCESSNTW 427 (480)
T ss_pred ccEEEEECCEEEEecCcCCCCccEEEEeCC-CCEEEeCCCCCCc-----cccceEEEECCEEEEECC-ceEEecCCCCcE
Confidence 3455667889998654 22 35667653 4567543321111 112366778999998654 467788887553
Q ss_pred E--EEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCcc
Q psy16020 94 L--KSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY 135 (151)
Q Consensus 94 ~--~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~ 135 (151)
. ..+. +++ .=..++..++.+++.++.+ ..+..||..+.
T Consensus 428 ~~~~~m~-~~r---~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 428 TLIDDPI-YPR---DNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred eEcCCCC-CCc---cccEEEEECCEEEEECCcCCCcccceEEEEECCCC
Confidence 2 2221 222 2234556688888888754 46788887754
No 285
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=93.75 E-value=0.24 Score=24.54 Aligned_cols=36 Identities=11% Similarity=0.060 Sum_probs=26.9
Q ss_pred CceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEE
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFR 41 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~ 41 (151)
.+++..++.+ +.|.++.+.++ .+.+|..||.+.+|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3556666644 68999988654 788888899998874
No 286
>KOG1524|consensus
Probab=93.66 E-value=2.5 Score=37.12 Aligned_cols=102 Identities=19% Similarity=0.344 Sum_probs=69.1
Q ss_pred eEEEEecCCcEEEEEcCC--------------CCCCCCCcceEEEeCCC-------------------CCceEEEeeeC-
Q psy16020 27 RVVCALADGSVAIFRRGP--------------DGQWDLSKYHTVTLGLP-------------------HHSVRSLAAVY- 72 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~--------------~~~wd~~~~~~i~l~~~-------------------~~pV~~m~~v~- 72 (151)
.+.+..+||.+.+.++.. .|.|+.+....+..|.. ..||+|..--.
T Consensus 77 ~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~ 156 (737)
T KOG1524|consen 77 TLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPN 156 (737)
T ss_pred eEEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCC
Confidence 466777789998887762 46888877766666531 37888888742
Q ss_pred --CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCC
Q psy16020 73 --NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 73 --~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~ 133 (151)
+-|||..+. .|.-+-+. - -.-++.+|- .-|-++.++. +.+-+|+++|-.-++||..
T Consensus 157 S~~vl~c~g~h~~IKpL~~n-~-k~i~WkAHD---GiiL~~~W~~~s~lI~sgGED~kfKvWD~~ 216 (737)
T KOG1524|consen 157 SNSIVFCQGGHISIKPLAAN-S-KIIRWRAHD---GLVLSLSWSTQSNIIASGGEDFRFKIWDAQ 216 (737)
T ss_pred CCceEEecCCeEEEeecccc-c-ceeEEeccC---cEEEEeecCccccceeecCCceeEEeeccc
Confidence 447766543 34433222 2 223577883 4788887774 4568899999999999998
No 287
>KOG1064|consensus
Probab=93.58 E-value=0.42 Score=47.03 Aligned_cols=55 Identities=9% Similarity=0.201 Sum_probs=38.7
Q ss_pred eEEEEeCC--CC-cEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 82 KIHVVDPK--SL-VVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 82 ~I~vid~~--t~-~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
++-.||+. .+ .... .+| +..++++++.+. .+++|++++|.++|||++..++...+
T Consensus 2316 n~~lwDtl~~~~~s~v~--~~H---~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2316 NVCLWDTLLPPMNSLVH--TCH---DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred cccchhcccCcccceee--eec---CCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence 46666643 11 1222 455 358999999965 56999999999999999977665544
No 288
>KOG0642|consensus
Probab=93.30 E-value=0.14 Score=44.37 Aligned_cols=70 Identities=17% Similarity=0.251 Sum_probs=59.7
Q ss_pred CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 73 NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 73 ~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
+..+.+-.+ +|.++|-.++++..+..+|.+ .+++++..++|. +++++.|+.+++|......+.+++...+
T Consensus 502 ~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~---svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 502 DITFTAHEDRSIRFFDNKTGKILHSMVAHKD---SVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred CeeEecccCCceecccccccccchheeeccc---eecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence 445555555 799999999999999999987 899999997766 8999999999999999888888886443
No 289
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=93.11 E-value=3.1 Score=33.36 Aligned_cols=100 Identities=8% Similarity=-0.040 Sum_probs=52.1
Q ss_pred eeeEEeCCeEEEEecC------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC------CeEEEE
Q psy16020 19 LPPVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK------NKIHVV 86 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~n------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~------n~I~vi 86 (151)
.+....++++|+..+. ..+.+|+.. ...|..-. ++......-.+++..+++||+-.| +.++++
T Consensus 117 ~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~-~~~W~~~~----~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~y 191 (323)
T TIGR03548 117 GSACYKDGTLYVGGGNRNGKPSNKSYLFNLE-TQEWFELP----DFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKY 191 (323)
T ss_pred ceEEEECCEEEEEeCcCCCccCceEEEEcCC-CCCeeECC----CCCCCCCCcceEEEECCEEEEEcCCCCccccceEEE
Confidence 4455678889887653 246667654 34574211 111100112245567889887654 247899
Q ss_pred eCCCCcEEEEEEe----c-CCCCCceeEEEEeCCEEEEEEcCC
Q psy16020 87 DPKSLVVLKSFDA----H-PRRESQVRQMTWAGDGVWVSIRLD 124 (151)
Q Consensus 87 d~~t~~i~~~~~~----h-~~~~~~I~~m~~~~~~vwis~~~d 124 (151)
|+++.+-.. +.. + +.....-..++..++.+++.++.+
T Consensus 192 d~~~~~W~~-~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~ 233 (323)
T TIGR03548 192 SPKKNQWQK-VADPTTDSEPISLLGAASIKINESLLLCIGGFN 233 (323)
T ss_pred ecCCCeeEE-CCCCCCCCCceeccceeEEEECCCEEEEECCcC
Confidence 998765322 111 0 100011222344466778887765
No 290
>PRK02888 nitrous-oxide reductase; Validated
Probab=93.09 E-value=2.1 Score=38.16 Aligned_cols=110 Identities=14% Similarity=0.143 Sum_probs=72.2
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCCCCc--------
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLV-------- 92 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~t~~-------- 92 (151)
+++.|+ ++++|.|++-.....-+......|+++. .| ..|.+. +..++++.+ +.|.|||.++++
T Consensus 288 GK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGK--sP-HGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~ 362 (635)
T PRK02888 288 GKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPK--NP-HGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIK 362 (635)
T ss_pred CCEEEE--CCCEEEEEECCccccCCcceEEEEECCC--Cc-cceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCC
Confidence 446666 3567999986531000123446677775 33 444554 467999885 789999999977
Q ss_pred ----EEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc----------cceeeeEeC
Q psy16020 93 ----VLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT----------YQHLQDVDI 143 (151)
Q Consensus 93 ----i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t----------~~~l~~idi 143 (151)
+..+.+.- ..-.+-.+++.| .+.|.--|+.|-.|+..+ ...++.+|+
T Consensus 363 ~~~~vvaevevG----lGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV 424 (635)
T PRK02888 363 PRDAVVAEPELG----LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDV 424 (635)
T ss_pred ccceEEEeeccC----CCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccC
Confidence 35555543 233444677774 499999999999999987 355666654
No 291
>KOG1912|consensus
Probab=93.02 E-value=0.2 Score=45.42 Aligned_cols=110 Identities=16% Similarity=0.235 Sum_probs=72.9
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEe----------CCeEEEEeCCCCcEE
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGY----------KNKIHVVDPKSLVVL 94 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~----------~n~I~vid~~t~~i~ 94 (151)
-+-+|+.+|+|-|++...+. ....+.+.. .-|+|+.-.++. +=.|| .|.+.|-|..||.-+
T Consensus 439 LvAvGT~sGTV~vvdvst~~-----v~~~fsvht--~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk 511 (1062)
T KOG1912|consen 439 LVAVGTNSGTVDVVDVSTNA-----VAASFSVHT--SLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSK 511 (1062)
T ss_pred eEEeecCCceEEEEEecchh-----hhhhhcccc--cceeeeeeccceeEEEeeeccccccccceeeeEEEEEccccccc
Confidence 47889999999999986321 223334433 677777665532 22332 378999999999865
Q ss_pred EEEEecCCCCCceeEEEEeCCEEEE-EEcCCCeEEEEeCCccceeeeEeC
Q psy16020 95 KSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 95 ~~~~~h~~~~~~I~~m~~~~~~vwi-s~~~d~~l~lwd~~t~~~l~~idi 143 (151)
+--.-....+++|..+..+..|-++ -.=++-.+.+||.+|..++++...
T Consensus 512 ~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~mS~ 561 (1062)
T KOG1912|consen 512 RFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRLMSL 561 (1062)
T ss_pred ccccCCCCCcCcceeeeecccCceEEEEecccchHHHhhccchHHHHHhh
Confidence 4432344457889999988555432 233567799999998888776543
No 292
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=92.95 E-value=4.6 Score=33.41 Aligned_cols=143 Identities=12% Similarity=0.069 Sum_probs=88.6
Q ss_pred CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC-CCceEEEee-e--CCE-EEE
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP-HHSVRSLAA-V--YNK-VWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-~~pV~~m~~-v--~~~-Lw~ 77 (151)
....+.+.+|.+|+=++-.-.-+...+.-++||++.-+..+++|.-. .+.-++.++ +.|+..-.. . +++ +|.
T Consensus 125 l~~~kvv~ei~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~---~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~ 201 (342)
T PF06433_consen 125 LAAKKVVGEIDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEA---QKSTKVFDPDDDPLFEHPAYSRDGGRLYFV 201 (342)
T ss_dssp TTTTEEEEEEEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEE---EEEEEESSTTTS-B-S--EEETTTTEEEEE
T ss_pred CCCCceeeeecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEe---EeeccccCCCCcccccccceECCCCeEEEE
Confidence 35678888999998666666667788899999999999999888532 233345442 356543332 2 355 678
Q ss_pred EeCCeEEEEeCCCCc--EEEEEEecCC---------CCCceeEEEEeCCEEEEEEcC---------CCeEEEEeCCccce
Q psy16020 78 GYKNKIHVVDPKSLV--VLKSFDAHPR---------RESQVRQMTWAGDGVWVSIRL---------DSTLRMYNAHTYQH 137 (151)
Q Consensus 78 g~~n~I~vid~~t~~--i~~~~~~h~~---------~~~~I~~m~~~~~~vwis~~~---------d~~l~lwd~~t~~~ 137 (151)
.+.++||-.|...-+ ..+.++.-++ ...++.......+.+++-... +..|=+||..|.+.
T Consensus 202 Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~kr 281 (342)
T PF06433_consen 202 SYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKR 281 (342)
T ss_dssp BTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEE
T ss_pred ecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeE
Confidence 889999999876444 5556653321 112333322223333333322 23477889999999
Q ss_pred eeeEeCCcccc
Q psy16020 138 LQDVDIEPYVS 148 (151)
Q Consensus 138 l~~idi~~~v~ 148 (151)
+..|+++..+.
T Consensus 282 v~Ri~l~~~~~ 292 (342)
T PF06433_consen 282 VARIPLEHPID 292 (342)
T ss_dssp EEEEEEEEEES
T ss_pred EEEEeCCCccc
Confidence 99998876543
No 293
>KOG2394|consensus
Probab=92.90 E-value=1.5 Score=38.35 Aligned_cols=123 Identities=10% Similarity=0.072 Sum_probs=81.2
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCC-----CCCCCC-CcceEEEeCC-----CCCceEEEe----------e
Q psy16020 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGP-----DGQWDL-SKYHTVTLGL-----PHHSVRSLA----------A 70 (151)
Q Consensus 15 ~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~-----~~~wd~-~~~~~i~l~~-----~~~pV~~m~----------~ 70 (151)
+++|+||+... +...++-++|.+..|+... ...|.. ..+..+.+.. ...||.+.. +
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F 298 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF 298 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence 37999999865 4688999999999996531 112211 1111222211 014554444 4
Q ss_pred eC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeee
Q psy16020 71 VY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 71 v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~ 140 (151)
.+ ..|.+-+ ++.++|||=.+.++...+... .....|+.++++|- .+++++|-.|.+|-....+.+.-
T Consensus 299 S~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSY---FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVAR 369 (636)
T KOG2394|consen 299 SPDGKYLATVSQDGFLRIFDFDTQELLGVMKSY---FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVAR 369 (636)
T ss_pred cCCCceEEEEecCceEEEeeccHHHHHHHHHhh---ccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEe
Confidence 32 4577777 468999998888876655432 24688999999988 56788999999999887766543
No 294
>KOG4649|consensus
Probab=92.82 E-value=2.6 Score=33.97 Aligned_cols=88 Identities=14% Similarity=0.101 Sum_probs=57.8
Q ss_pred CCceeeeeeCCCceeeeE-EeCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCC-
Q psy16020 5 HPTPYPLNKILDTALPPV-HVQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN- 81 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~-~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n- 81 (151)
+....|+--|.+.+-+=. -.+++|.+|.-+|.|.+...+.+ ..|++.....++.. | -|.+-++-+|||+.+
T Consensus 42 sG~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~----a--~~d~~~glIycgshd~ 115 (354)
T KOG4649|consen 42 SGNLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR----A--QCDFDGGLIYCGSHDG 115 (354)
T ss_pred CCcEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc----e--EEcCCCceEEEecCCC
Confidence 445556665655444321 16889999999999999887765 35765433222221 1 244456789999965
Q ss_pred eEEEEeCCCCcEEEEEE
Q psy16020 82 KIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~ 98 (151)
+.|++|+++..+....+
T Consensus 116 ~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 116 NFYALDPKTYGCVYKSK 132 (354)
T ss_pred cEEEecccccceEEecc
Confidence 89999999988665543
No 295
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=92.70 E-value=4.8 Score=32.95 Aligned_cols=134 Identities=14% Similarity=0.140 Sum_probs=87.4
Q ss_pred CCceeeeeeCCC---ceeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC
Q psy16020 5 HPTPYPLNKILD---TALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK 80 (151)
Q Consensus 5 ~~~~l~~i~l~~---~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~ 80 (151)
+.+.+|+-+++. -+-.....++.+|++..+|.+..++...+. .|..+.+..+.+.....|+ ..++.++.++.
T Consensus 130 ~G~~~W~~~~~~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~----~~~~~vy~~~~ 205 (370)
T COG1520 130 TGTLVWSRNVGGSPYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPA----IASGTVYVGSD 205 (370)
T ss_pred CCcEEEEEecCCCeEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCce----eecceEEEecC
Confidence 567788888888 333334456789999878999998875322 4653322112222212444 56788998887
Q ss_pred C---eEEEEeCCCCcEEEEEEecCCCCCc-e-------eEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 81 N---KIHVVDPKSLVVLKSFDAHPRRESQ-V-------RQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 81 n---~I~vid~~t~~i~~~~~~h~~~~~~-I-------~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
+ .++.+|+++++..-+...+...... + ......+.++ .....++.+...|..+++.+-+.+.
T Consensus 206 ~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-~~~~~~g~~~~l~~~~G~~~W~~~~ 278 (370)
T COG1520 206 GYDGILYALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGV-YAGSYGGKLLCLDADTGELIWSFPA 278 (370)
T ss_pred CCcceEEEEEccCCcEeeeeeeecccCcccccccccccCceEEECCcE-EEEecCCeEEEEEcCCCceEEEEec
Confidence 4 7999999999988876544322211 1 1223335555 4666777799999999999999876
No 296
>KOG1334|consensus
Probab=92.70 E-value=0.16 Score=43.55 Aligned_cols=121 Identities=16% Similarity=0.161 Sum_probs=84.5
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCC-CC-CCCCCc---ceEEE--eCC-CCCceEEEeeeC---CEEEEEeCC
Q psy16020 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGP-DG-QWDLSK---YHTVT--LGL-PHHSVRSLAAVY---NKVWCGYKN 81 (151)
Q Consensus 15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~-~~-~wd~~~---~~~i~--l~~-~~~pV~~m~~v~---~~Lw~g~~n 81 (151)
|--|+|+.|. ++.+.++-+|-.|..|+... .| .-+... +..-. -|. ....|.+.-+-+ +.+--|+++
T Consensus 336 ~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDC 415 (559)
T KOG1334|consen 336 PVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDC 415 (559)
T ss_pred cccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCcc
Confidence 4578999997 45799999999999995542 22 112222 11111 121 125577777765 446677774
Q ss_pred -eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcccee
Q psy16020 82 -KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 82 -~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l 138 (151)
.|++|+-+++++.+-+++.. .-|+||.--+. -|+.|.+-|--||+|-..+-+..
T Consensus 416 GhIFiW~K~t~eii~~MegDr---~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er~ 471 (559)
T KOG1334|consen 416 GHIFIWDKKTGEIIRFMEGDR---HVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAERA 471 (559)
T ss_pred ceEEEEecchhHHHHHhhccc---ceEeccCCCCCCchhhccCCccceeeecCCccccc
Confidence 89999999999999999764 28999877654 66889999999999998665544
No 297
>PRK05137 tolB translocation protein TolB; Provisional
Probab=92.66 E-value=4.1 Score=34.14 Aligned_cols=80 Identities=11% Similarity=0.047 Sum_probs=49.0
Q ss_pred cceEEEeCCCCCceEEEeee--CCEEEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcC
Q psy16020 52 KYHTVTLGLPHHSVRSLAAV--YNKVWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRL 123 (151)
Q Consensus 52 ~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~ 123 (151)
.++.+.-+. .++.+.... +++|...+ . ..|+++|.++++.. .+..+. ..+....++++| +.++.+.
T Consensus 193 ~~~~lt~~~--~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~---g~~~~~~~SPDG~~la~~~~~ 266 (435)
T PRK05137 193 NVRYLTDGS--SLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFP---GMTFAPRFSPDGRKVVMSLSQ 266 (435)
T ss_pred CcEEEecCC--CCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCC---CcccCcEECCCCCEEEEEEec
Confidence 344444443 788888776 35555443 2 47999999998864 344333 245566677555 4445554
Q ss_pred C--CeEEEEeCCccce
Q psy16020 124 D--STLRMYNAHTYQH 137 (151)
Q Consensus 124 d--~~l~lwd~~t~~~ 137 (151)
+ ..|.+||..+.+.
T Consensus 267 ~g~~~Iy~~d~~~~~~ 282 (435)
T PRK05137 267 GGNTDIYTMDLRSGTT 282 (435)
T ss_pred CCCceEEEEECCCCce
Confidence 4 4588889887654
No 298
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.57 E-value=1.9 Score=33.68 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=50.9
Q ss_pred CCCcceEEEeCCCCCceE---EEeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEEecC---------CCCCceeEEEEeC
Q psy16020 49 DLSKYHTVTLGLPHHSVR---SLAAVYNKVWCGYK--NKIHVVDPKSLVVLKSFDAHP---------RRESQVRQMTWAG 114 (151)
Q Consensus 49 d~~~~~~i~l~~~~~pV~---~m~~v~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~---------~~~~~I~~m~~~~ 114 (151)
++.....+++-....||+ -+..|++.||+.-+ ++|-.||++||++...++... +.....+-+++.+
T Consensus 159 tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~ 238 (262)
T COG3823 159 TFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDP 238 (262)
T ss_pred HhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecC
Confidence 455555666543235654 45567899998875 799999999999999988542 1122455566653
Q ss_pred --CEEEEEEcCCCe
Q psy16020 115 --DGVWVSIRLDST 126 (151)
Q Consensus 115 --~~vwis~~~d~~ 126 (151)
+..++++.+=+.
T Consensus 239 ~~~r~~iTGK~wp~ 252 (262)
T COG3823 239 QQDRFLITGKLWPL 252 (262)
T ss_pred cCCeEEEecCcCce
Confidence 345677665443
No 299
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=92.42 E-value=6.5 Score=34.21 Aligned_cols=103 Identities=14% Similarity=0.293 Sum_probs=71.1
Q ss_pred CCeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCCCCcEEEEEEec
Q psy16020 25 QGRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 25 ~~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~t~~i~~~~~~h 100 (151)
++.+.+|.-|| .|.||+... ...+.+.-+- .-|-+|.... +.+.+|..+ .|.++|.+|+.+. .++
T Consensus 371 ~e~~vigt~dgD~l~iyd~~~------~e~kr~e~~l--g~I~av~vs~dGK~~vvaNdr~el~vididngnv~-~id-- 439 (668)
T COG4946 371 PEGDVIGTNDGDKLGIYDKDG------GEVKRIEKDL--GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVR-LID-- 439 (668)
T ss_pred CcceEEeccCCceEEEEecCC------ceEEEeeCCc--cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCee-Eec--
Confidence 45788999999 799998642 1223333222 5577777753 457788765 7999999999863 222
Q ss_pred CCCCCceeEEEEeCCEEEEEEcC-----CCeEEEEeCCcccee
Q psy16020 101 PRRESQVRQMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHL 138 (151)
Q Consensus 101 ~~~~~~I~~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l 138 (151)
......|+....++++-|++-+- -..|+|||..+.+..
T Consensus 440 kS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy 482 (668)
T COG4946 440 KSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIY 482 (668)
T ss_pred ccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEE
Confidence 22346899999998888987664 346999999976543
No 300
>PLN02153 epithiospecifier protein
Probab=92.42 E-value=5 Score=32.46 Aligned_cols=112 Identities=16% Similarity=0.139 Sum_probs=62.4
Q ss_pred eeEEeCCeEEEEecC---C---------cEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeeeCCEEEEEeC-----
Q psy16020 20 PPVHVQGRVVCALAD---G---------SVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAVYNKVWCGYK----- 80 (151)
Q Consensus 20 ~i~~~~~~v~vgl~n---G---------~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v~~~Lw~g~~----- 80 (151)
+....++++|+-.+- | ++-+|+.. ...|..-.+ .+. +...-.+++..+++||+-.|
T Consensus 132 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~-~~~W~~l~~----~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~ 206 (341)
T PLN02153 132 SMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIA-DGKWVQLPD----PGENFEKRGGAGFAVVQGKIWVVYGFATSI 206 (341)
T ss_pred EEEEECCEEEEECCccCCCccCCCcccceEEEEECC-CCeEeeCCC----CCCCCCCCCcceEEEECCeEEEEecccccc
Confidence 345567777775442 1 46677654 345742111 111 01112356677888886321
Q ss_pred ----------CeEEEEeCCCCcEEEEEE-ecCCCCCceeEEEEeCCEEEEEEcCC--------------CeEEEEeCCcc
Q psy16020 81 ----------NKIHVVDPKSLVVLKSFD-AHPRRESQVRQMTWAGDGVWVSIRLD--------------STLRMYNAHTY 135 (151)
Q Consensus 81 ----------n~I~vid~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~vwis~~~d--------------~~l~lwd~~t~ 135 (151)
+.++++|+++.+=.+.-. +........+.++..++.+++.++.. +.+..||..+.
T Consensus 207 ~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~ 286 (341)
T PLN02153 207 LPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL 286 (341)
T ss_pred ccCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence 469999999877433211 11111234556667788888888852 36888998764
Q ss_pred c
Q psy16020 136 Q 136 (151)
Q Consensus 136 ~ 136 (151)
+
T Consensus 287 ~ 287 (341)
T PLN02153 287 V 287 (341)
T ss_pred E
Confidence 3
No 301
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=92.37 E-value=1.8 Score=36.71 Aligned_cols=84 Identities=6% Similarity=0.031 Sum_probs=58.6
Q ss_pred CCCCceEEEeeeC-CEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-------------------CEE
Q psy16020 60 LPHHSVRSLAAVY-NKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-------------------DGV 117 (151)
Q Consensus 60 ~~~~pV~~m~~v~-~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-------------------~~v 117 (151)
+...-+.++.+.. ++|.+.++ ++|.++|..++.+.+-+.+-.|. +..=+.... -.+
T Consensus 305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA--qc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L 382 (415)
T PF14655_consen 305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA--QCGWIEVPEEGDRDRSNSNSPKSSSRFALFL 382 (415)
T ss_pred cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccc--eEEEEEeecccccccccccccCCCCcceEEE
Confidence 3334456666654 45555566 59999999999999999877542 222222211 123
Q ss_pred EEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 118 WVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 118 wis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
.|-.-+-+.|.+|+.+++..+..+++.+
T Consensus 383 vIyaprRg~lEvW~~~~g~Rv~a~~v~k 410 (415)
T PF14655_consen 383 VIYAPRRGILEVWSMRQGPRVAAFNVGK 410 (415)
T ss_pred EEEeccCCeEEEEecCCCCEEEEEEeCC
Confidence 5677889999999999999999998855
No 302
>KOG3621|consensus
Probab=92.37 E-value=0.64 Score=41.50 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=69.0
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe--CCCCCceEEEeeeCCEEEEEeC-CeEEEEeCCCCc-
Q psy16020 17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL--GLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLV- 92 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l--~~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~- 92 (151)
.-+|.-..++++-+|.+-|.|..|.|..+ ....++- ++...-++|+..++.-+.+|++ ++|-|+-....+
T Consensus 37 ~lTc~dst~~~l~~GsS~G~lyl~~R~~~------~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 37 KLTCVDATEEYLAMGSSAGSVYLYNRHTG------EMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP 110 (726)
T ss_pred EEEEeecCCceEEEecccceEEEEecCch------hhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence 44566667889999999999999999632 1112222 1111223333334455778886 578777655422
Q ss_pred EEEEEEecCCC--CCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020 93 VLKSFDAHPRR--ESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 93 i~~~~~~h~~~--~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t 134 (151)
-....-.|.+. ...|+++.++.++. +.+++..|.|.+--..+
T Consensus 111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 11112222222 45899999998877 78999999987655443
No 303
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=92.34 E-value=1.3 Score=40.38 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=50.6
Q ss_pred eeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeE-----EE------------------EeCCEEEEEEcCC
Q psy16020 69 AAVYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQ-----MT------------------WAGDGVWVSIRLD 124 (151)
Q Consensus 69 ~~v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~-----m~------------------~~~~~vwis~~~d 124 (151)
+++++.||+++. ++|+.+|++|++.+=++............ +. .++..| +....|
T Consensus 191 lvvgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV-~~~T~D 269 (764)
T TIGR03074 191 LKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRI-ILPTSD 269 (764)
T ss_pred EEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEE-EEecCC
Confidence 346899999885 79999999999988887755332111111 11 112243 456679
Q ss_pred CeEEEEeCCccceeeeEe
Q psy16020 125 STLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 125 ~~l~lwd~~t~~~l~~id 142 (151)
+.|.-.|++|++.+.+++
T Consensus 270 g~LiALDA~TGk~~W~fg 287 (764)
T TIGR03074 270 ARLIALDADTGKLCEDFG 287 (764)
T ss_pred CeEEEEECCCCCEEEEec
Confidence 999999999999997653
No 304
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=92.25 E-value=0.42 Score=26.42 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=17.8
Q ss_pred EEeeeCCEEEEEeC-CeEEEEeCCC
Q psy16020 67 SLAAVYNKVWCGYK-NKIHVVDPKS 90 (151)
Q Consensus 67 ~m~~v~~~Lw~g~~-n~I~vid~~t 90 (151)
.+++.++.|++++. ++++.+|++|
T Consensus 16 ~~~v~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 16 SPAVAGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp --EECTSEEEEE-TTSEEEEEETT-
T ss_pred CCEEECCEEEEEcCCCEEEEEeCCC
Confidence 34677899999996 6999999976
No 305
>KOG1334|consensus
Probab=92.18 E-value=0.32 Score=41.83 Aligned_cols=79 Identities=13% Similarity=0.191 Sum_probs=61.3
Q ss_pred CceEEEeee--CCEEEEEeCC-eEEEEeCC--CC----------cEEEE-EEecCCCCCceeEEEEeC--CEEEEEEcCC
Q psy16020 63 HSVRSLAAV--YNKVWCGYKN-KIHVVDPK--SL----------VVLKS-FDAHPRRESQVRQMTWAG--DGVWVSIRLD 124 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~n-~I~vid~~--t~----------~i~~~-~~~h~~~~~~I~~m~~~~--~~vwis~~~d 124 (151)
--|+|+++. +++|-+++.. .||.++.. -| +..++ +.+|.+. ..|..+.+-| ..-.+|+++-
T Consensus 337 v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~-~TVKgVNFfGPrsEyVvSGSDC 415 (559)
T KOG1334|consen 337 VNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNS-RTVKGVNFFGPRSEYVVSGSDC 415 (559)
T ss_pred ccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccc-cccceeeeccCccceEEecCcc
Confidence 668999997 3678888865 79999644 24 33444 8899774 4588888887 4447899999
Q ss_pred CeEEEEeCCccceeeeEe
Q psy16020 125 STLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 125 ~~l~lwd~~t~~~l~~id 142 (151)
+.|-+|+-.++++++-..
T Consensus 416 GhIFiW~K~t~eii~~Me 433 (559)
T KOG1334|consen 416 GHIFIWDKKTGEIIRFME 433 (559)
T ss_pred ceEEEEecchhHHHHHhh
Confidence 999999999999987654
No 306
>PHA02713 hypothetical protein; Provisional
Probab=92.17 E-value=3.1 Score=36.44 Aligned_cols=108 Identities=10% Similarity=0.161 Sum_probs=62.1
Q ss_pred ceeeeEEeCCeEEEEec-CC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCce--EEEeeeCCEEEEEeC--------
Q psy16020 17 TALPPVHVQGRVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RSLAAVYNKVWCGYK-------- 80 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~-nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV--~~m~~v~~~Lw~g~~-------- 80 (151)
.=.+....++++|+-++ +| ++-.|+... ..|..-.+ + ..|. .+++..+++||+-.|
T Consensus 343 ~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~-~~W~~~~~----m---p~~r~~~~~~~~~g~IYviGG~~~~~~~~ 414 (557)
T PHA02713 343 CRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGD-DKWKMLPD----M---PIALSSYGMCVLDQYIYIIGGRTEHIDYT 414 (557)
T ss_pred hceeEEEECCEEEEECCcCCCCCCceEEEEECCC-CeEEECCC----C---CcccccccEEEECCEEEEEeCCCcccccc
Confidence 34456677889988554 33 366676543 45743221 1 1122 244556889887543
Q ss_pred -----------------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC------CeEEEEeCCc
Q psy16020 81 -----------------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD------STLRMYNAHT 134 (151)
Q Consensus 81 -----------------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d------~~l~lwd~~t 134 (151)
+.+..+|+++.+=...-.-... ..=..++..++.+++.++.+ +.+..||.++
T Consensus 415 ~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~--r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 415 SVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTG--TIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred cccccccccccccccccceEEEECCCCCeEeecCCCCcc--cccCcEEEECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 3588999987653322111111 12235666788888887754 3578899887
No 307
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=92.16 E-value=0.52 Score=25.88 Aligned_cols=28 Identities=25% Similarity=0.361 Sum_probs=23.2
Q ss_pred CEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020 73 NKVWCGYK-NKIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 73 ~~Lw~g~~-n~I~vid~~t~~i~~~~~~h 100 (151)
+.+++++. +.|+.+|++||+++=+++.-
T Consensus 1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 1 GRVYVGTPDGYLYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp TEEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred CEEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence 46888874 69999999999998887754
No 308
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=91.90 E-value=2.3 Score=35.73 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=67.8
Q ss_pred ceeeeEEe----C--C----eEEEEecCCcEEEEEcC--CCCCCCCCcceEEEeCCCCCceEEEeeeC------------
Q psy16020 17 TALPPVHV----Q--G----RVVCALADGSVAIFRRG--PDGQWDLSKYHTVTLGLPHHSVRSLAAVY------------ 72 (151)
Q Consensus 17 ~V~~i~~~----~--~----~v~vgl~nG~l~v~~~~--~~~~wd~~~~~~i~l~~~~~pV~~m~~v~------------ 72 (151)
.|.+|.+. + + .+|||...|.+.+|... .+|.|..+........+ .||..|...+
T Consensus 137 ~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~--~~i~~I~~i~~~~G~~a~At~~ 214 (395)
T PF08596_consen 137 YVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHD--SPILSIIPINADTGESALATIS 214 (395)
T ss_dssp -EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS------EEEEEETTT--B-B-BHH
T ss_pred CeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCC--CceEEEEEEECCCCCcccCchh
Confidence 67677653 2 2 69999999999999775 44666544333331222 5555444331
Q ss_pred -----------CEEEEEe-CCeEEEEeCCCCcEE-EEEEecCCCCCceeEEE---EeCCEEEEEEcCCCeEEEEeCCccc
Q psy16020 73 -----------NKVWCGY-KNKIHVVDPKSLVVL-KSFDAHPRRESQVRQMT---WAGDGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 73 -----------~~Lw~g~-~n~I~vid~~t~~i~-~~~~~h~~~~~~I~~m~---~~~~~vwis~~~d~~l~lwd~~t~~ 136 (151)
..+++.+ ...|+|+.+-+.+.- +.|+.+. ....+..+. ..+...++..-.++.+++|-.-..+
T Consensus 215 ~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~-~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lk 293 (395)
T PF08596_consen 215 AMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPF-LCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLK 293 (395)
T ss_dssp HHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-E-EEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--
T ss_pred HhhccccCCCcCcEEEEEcccceEEEeCCCCcccceeecccc-ccceEEEEeecccCCceEEEEEECCCcEEEEECCCch
Confidence 2355555 578999998876643 3342110 001111111 2245558999999999999999999
Q ss_pred eeeeEeCCc
Q psy16020 137 HLQDVDIEP 145 (151)
Q Consensus 137 ~l~~idi~~ 145 (151)
.+.++++-+
T Consensus 294 ei~~~~l~~ 302 (395)
T PF08596_consen 294 EIKSVSLPP 302 (395)
T ss_dssp EEEEEE-SS
T ss_pred HhhcccCCC
Confidence 999998743
No 309
>KOG2066|consensus
Probab=91.82 E-value=5.5 Score=36.38 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=66.8
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-------EEEEEeCCeEEEEeCCCCcEEEEE
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-------KVWCGYKNKIHVVDPKSLVVLKSF 97 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-------~Lw~g~~n~I~vid~~t~~i~~~~ 97 (151)
+.++-.+.-||++.|.....+ ++...... +.|+.++++..+ +...|..-.++.....=+.-+.+.
T Consensus 83 Gey~asCS~DGkv~I~sl~~~-----~~~~~~df---~rpiksial~Pd~~~~~sk~fv~GG~aglvL~er~wlgnk~~v 154 (846)
T KOG2066|consen 83 GEYVASCSDDGKVVIGSLFTD-----DEITQYDF---KRPIKSIALHPDFSRQQSKQFVSGGMAGLVLSERNWLGNKDSV 154 (846)
T ss_pred CceEEEecCCCcEEEeeccCC-----ccceeEec---CCcceeEEeccchhhhhhhheeecCcceEEEehhhhhcCccce
Confidence 334555555566666554311 12222222 478899888643 344443212555443335555666
Q ss_pred EecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 98 DAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
..|. .+.+|.++.+-|+ +|+-.+|-=+++||+.+.+.+..|.
T Consensus 155 ~l~~-~eG~I~~i~W~g~--lIAWand~Gv~vyd~~~~~~l~~i~ 196 (846)
T KOG2066|consen 155 VLSE-GEGPIHSIKWRGN--LIAWANDDGVKVYDTPTRQRLTNIP 196 (846)
T ss_pred eeec-CccceEEEEecCc--EEEEecCCCcEEEeccccceeeccC
Confidence 6664 4789999999777 5666788889999999999998883
No 310
>KOG1354|consensus
Probab=91.55 E-value=1.6 Score=36.34 Aligned_cols=40 Identities=20% Similarity=0.255 Sum_probs=29.6
Q ss_pred ceeEEEEeCCEEEEEEcCCCeEEEEeCCc-cceeeeEeCCc
Q psy16020 106 QVRQMTWAGDGVWVSIRLDSTLRMYNAHT-YQHLQDVDIEP 145 (151)
Q Consensus 106 ~I~~m~~~~~~vwis~~~d~~l~lwd~~t-~~~l~~idi~~ 145 (151)
.|+.+.+..++--.--.+|=.|.||+.+- -+.-..+||.|
T Consensus 166 hiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP 206 (433)
T KOG1354|consen 166 HINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIKP 206 (433)
T ss_pred EeeeeeecCccceEeeccceeeeeccccccCCceeEEEccc
Confidence 57777777666533445688899999984 66677788888
No 311
>KOG1524|consensus
Probab=91.41 E-value=0.13 Score=44.77 Aligned_cols=55 Identities=20% Similarity=0.450 Sum_probs=43.8
Q ss_pred EEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020 75 VWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH 133 (151)
Q Consensus 75 Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~ 133 (151)
+-|.+++++.++ .+++++|++.++|.. .|.+=.++++|- +++.++|+.|++|--.
T Consensus 79 ~i~s~DGkf~il-~k~~rVE~sv~AH~~---A~~~gRW~~dGtgLlt~GEDG~iKiWSrs 134 (737)
T KOG1524|consen 79 LICSNDGRFVIL-NKSARVERSISAHAA---AISSGRWSPDGAGLLTAGEDGVIKIWSRS 134 (737)
T ss_pred EEEcCCceEEEe-cccchhhhhhhhhhh---hhhhcccCCCCceeeeecCCceEEEEecc
Confidence 556668899888 568999999999964 666666665544 7899999999999754
No 312
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.32 E-value=13 Score=35.18 Aligned_cols=121 Identities=12% Similarity=0.086 Sum_probs=67.3
Q ss_pred eeeEEe--CCeEEEEec-CCcEEEEEcCCCCCCCCC-cceEEEe-CC-----CCCceEEEeee--CCEEEEEeC--CeEE
Q psy16020 19 LPPVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLS-KYHTVTL-GL-----PHHSVRSLAAV--YNKVWCGYK--NKIH 84 (151)
Q Consensus 19 ~~i~~~--~~~v~vgl~-nG~l~v~~~~~~~~wd~~-~~~~i~l-~~-----~~~pV~~m~~v--~~~Lw~g~~--n~I~ 84 (151)
.++... ++.+|++-+ ++.|.+|+...+..-.+. ....... +. .-..-+.|++. ++.||++.. ++|.
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Ir 765 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIR 765 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEE
Confidence 455555 468888864 567888876421100000 0000000 00 00122456665 356998873 5899
Q ss_pred EEeCCCCcEEEEEEecC------------C------CCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceee
Q psy16020 85 VVDPKSLVVLKSFDAHP------------R------RESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~------------~------~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
+||++++.......+.. + .......|+++++| +|++-..+..|++||..+.....
T Consensus 766 v~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~t 839 (1057)
T PLN02919 766 ALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTT 839 (1057)
T ss_pred EEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEE
Confidence 99999876421111000 0 01124567777654 79999999999999998766553
No 313
>KOG2063|consensus
Probab=91.30 E-value=0.084 Score=48.40 Aligned_cols=81 Identities=9% Similarity=0.012 Sum_probs=58.8
Q ss_pred eCCCcee-eeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCc----ceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEE
Q psy16020 13 KILDTAL-PPVHVQGRVVCALADGSVAIFRRGPDGQWDLSK----YHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHV 85 (151)
Q Consensus 13 ~l~~~V~-~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~----~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~v 85 (151)
++|..|. |+.-.++.||+|+-+|+|..|...+.+.-+... +..+.-.-.++||+.|.... +.+.+-|++.|.+
T Consensus 13 ~~~~~vd~~va~~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~~~~~~ll~l~dsqi~~ 92 (877)
T KOG2063|consen 13 RLPLEVDLCVAAYGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVCASLELLLILSDSQIAV 92 (877)
T ss_pred hcCCccchHHHHhCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhcchhcchheecCCccee
Confidence 4666777 999999999999999999999887543211111 01111111259999999975 6689999999999
Q ss_pred EeCCCCcE
Q psy16020 86 VDPKSLVV 93 (151)
Q Consensus 86 id~~t~~i 93 (151)
.+..+++-
T Consensus 93 ~~l~~~~~ 100 (877)
T KOG2063|consen 93 HKLPELEP 100 (877)
T ss_pred eecCcccc
Confidence 99887775
No 314
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=91.24 E-value=0.82 Score=24.95 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=28.3
Q ss_pred CCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 114 GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 114 ~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
+..+|++...++.|.++|+.+++.+..|++..
T Consensus 3 ~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~ 34 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVIDTATNKVIATIPVGG 34 (42)
T ss_pred CCEEEEEeCCCCEEEEEECCCCeEEEEEECCC
Confidence 56689999999999999999999999998753
No 315
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=91.23 E-value=4.5 Score=34.57 Aligned_cols=65 Identities=15% Similarity=0.299 Sum_probs=37.7
Q ss_pred CE-EEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE--EEcCCCeEEEEeCC------------ccce
Q psy16020 73 NK-VWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV--SIRLDSTLRMYNAH------------TYQH 137 (151)
Q Consensus 73 ~~-Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi--s~~~d~~l~lwd~~------------t~~~ 137 (151)
+. |-+.+.+.|..+|.+++++.+++... .|..+.++++|-.+ .+++.-.|.=+|.+ .++.
T Consensus 117 G~LL~~~~~~~i~~yDw~~~~~i~~i~v~-----~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~ 191 (443)
T PF04053_consen 117 GNLLGVKSSDFICFYDWETGKLIRRIDVS-----AVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFEL 191 (443)
T ss_dssp SSSEEEEETTEEEEE-TTT--EEEEESS------E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEE
T ss_pred CcEEEEECCCCEEEEEhhHcceeeEEecC-----CCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhceEE
Confidence 44 44444567999999999999999955 58999999664444 44444444446666 6677
Q ss_pred eeeEe
Q psy16020 138 LQDVD 142 (151)
Q Consensus 138 l~~id 142 (151)
+.+|+
T Consensus 192 ~~E~~ 196 (443)
T PF04053_consen 192 IHEIS 196 (443)
T ss_dssp EEEE-
T ss_pred EEEec
Confidence 77764
No 316
>PLN02193 nitrile-specifier protein
Probab=91.01 E-value=8.7 Score=32.79 Aligned_cols=112 Identities=16% Similarity=0.105 Sum_probs=63.8
Q ss_pred eeeEEeCCeEEEEecC-C-----cEEEEEcCCCCCCCCCcceEEEeCCC--CCceEEEeeeCCEEEEEeC------CeEE
Q psy16020 19 LPPVHVQGRVVCALAD-G-----SVAIFRRGPDGQWDLSKYHTVTLGLP--HHSVRSLAAVYNKVWCGYK------NKIH 84 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~n-G-----~l~v~~~~~~~~wd~~~~~~i~l~~~--~~pV~~m~~v~~~Lw~g~~------n~I~ 84 (151)
.++...++++|+-.+- + .+-+|+.. ...|..-.+ .+.. ...-.+++.+++++|+-.| +.++
T Consensus 272 h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~-t~~W~~~~~----~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~ 346 (470)
T PLN02193 272 HSMAADEENVYVFGGVSATARLKTLDSYNIV-DKKWFHCST----PGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVH 346 (470)
T ss_pred eEEEEECCEEEEECCCCCCCCcceEEEEECC-CCEEEeCCC----CCCCCCCCCCcEEEEECCcEEEEECCCCCccCceE
Confidence 3445567777776543 2 35566653 345642111 0110 0112345667888886544 6799
Q ss_pred EEeCCCCcEEEEEEec--CCCCCceeEEEEeCCEEEEEEcCC--------------CeEEEEeCCccc
Q psy16020 85 VVDPKSLVVLKSFDAH--PRRESQVRQMTWAGDGVWVSIRLD--------------STLRMYNAHTYQ 136 (151)
Q Consensus 85 vid~~t~~i~~~~~~h--~~~~~~I~~m~~~~~~vwis~~~d--------------~~l~lwd~~t~~ 136 (151)
++|+++.+-.+. ... ......-.+++..++.+++.++.+ +.+..||..|.+
T Consensus 347 ~yD~~t~~W~~~-~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~ 413 (470)
T PLN02193 347 YYDPVQDKWTQV-ETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQ 413 (470)
T ss_pred EEECCCCEEEEe-ccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCE
Confidence 999998775432 211 111234556666788888888853 358899998754
No 317
>KOG4227|consensus
Probab=90.97 E-value=1.2 Score=37.77 Aligned_cols=80 Identities=13% Similarity=0.046 Sum_probs=58.0
Q ss_pred CCCceEEEeeeCCEEEEEeCC---eEEEEeCCCC------cEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEE
Q psy16020 61 PHHSVRSLAAVYNKVWCGYKN---KIHVVDPKSL------VVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMY 130 (151)
Q Consensus 61 ~~~pV~~m~~v~~~Lw~g~~n---~I~vid~~t~------~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lw 130 (151)
+..=|+.+.+.++-=|.++|+ .+.+|+.+-+ +...-.+-|.+ +.|+|+++. ++....|+.+++++.+-
T Consensus 55 H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~--SNIF~L~F~~~N~~~~SG~~~~~VI~H 132 (609)
T KOG4227|consen 55 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHR--SNIFSLEFDLENRFLYSGERWGTVIKH 132 (609)
T ss_pred hccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccc--cceEEEEEccCCeeEecCCCcceeEee
Confidence 457788899987666777753 6999997643 33333333332 589999998 56668899999999999
Q ss_pred eCCccceeeeEe
Q psy16020 131 NAHTYQHLQDVD 142 (151)
Q Consensus 131 d~~t~~~l~~id 142 (151)
|++|.+.+.-.+
T Consensus 133 DiEt~qsi~V~~ 144 (609)
T KOG4227|consen 133 DIETKQSIYVAN 144 (609)
T ss_pred ecccceeeeeec
Confidence 999987765543
No 318
>KOG2394|consensus
Probab=90.80 E-value=1.8 Score=37.82 Aligned_cols=110 Identities=17% Similarity=0.295 Sum_probs=66.5
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeEEEEeCC-------------
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHVVDPK------------- 89 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~vid~~------------- 89 (151)
.+.+|...|.+..++... -++.........-.+..|+|+.-+ ++.++... .+..|++|.+
T Consensus 187 dllIGf~tGqvq~idp~~---~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~ 263 (636)
T KOG2394|consen 187 DLLIGFTTGQVQLIDPIN---FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQAL 263 (636)
T ss_pred ceEEeeccCceEEecchh---hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCccccc
Confidence 488888889988887542 011110011111124889999887 24455443 3678888532
Q ss_pred ----CCcEEEEEEecCC--------CCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceee
Q psy16020 90 ----SLVVLKSFDAHPR--------RESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 90 ----t~~i~~~~~~h~~--------~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~ 139 (151)
.+.+...+...++ ....|+...++++|- +.+.++|+.||+||-.+-+++.
T Consensus 264 k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg 326 (636)
T KOG2394|consen 264 KDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLG 326 (636)
T ss_pred CCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHH
Confidence 1222222221111 134788888888888 7889999999999999877654
No 319
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=90.68 E-value=1.9 Score=33.19 Aligned_cols=41 Identities=5% Similarity=-0.076 Sum_probs=36.8
Q ss_pred CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCC
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGP 44 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~ 44 (151)
+..+.+..|.|+.++..|...++++.+=+++|.+.||+...
T Consensus 1 sGrrl~P~i~Lgs~~~~l~~~~~~Ll~iT~~G~l~vWnl~~ 41 (219)
T PF07569_consen 1 SGRRLLPPIVLGSPVSFLECNGSYLLAITSSGLLYVWNLKK 41 (219)
T ss_pred CCccccCcEecCCceEEEEeCCCEEEEEeCCCeEEEEECCC
Confidence 35677899999999999999999999999999999998864
No 320
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=90.68 E-value=12 Score=33.65 Aligned_cols=136 Identities=14% Similarity=0.138 Sum_probs=88.9
Q ss_pred eeeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEc---------CC----CCC-------CCCC---------------
Q psy16020 9 YPLNKILDTALPPVHV--QGRVVCALADGSVAIFRR---------GP----DGQ-------WDLS--------------- 51 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~---------~~----~~~-------wd~~--------------- 51 (151)
.-++++.+.|..|+.. ++.+|+-+.||.|-.|+. .- .+. -+++
T Consensus 123 ~~~~kl~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~ 202 (670)
T PF10395_consen 123 EFELKLDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLS 202 (670)
T ss_pred eEEEEcccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcC
Confidence 4467888999999987 568999999999999999 20 000 0000
Q ss_pred ----cceEEEeCCCCCceEEE---------------eeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecC----CCCCcee
Q psy16020 52 ----KYHTVTLGLPHHSVRSL---------------AAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHP----RRESQVR 108 (151)
Q Consensus 52 ----~~~~i~l~~~~~pV~~m---------------~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~----~~~~~I~ 108 (151)
..+.+.++....|+.-+ .+..++||+=.++.|++++..+++++++++.-. ..+..|.
T Consensus 203 ~~k~~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vS 282 (670)
T PF10395_consen 203 NSKLSYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQLSKKTISSYSIPNFQIQKTISLPSIIDKESDDLVS 282 (670)
T ss_pred CCcEEEEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEEeCCEEEEEEcCCceEEEEEEechhhccccccceE
Confidence 11233442222333332 223578888788899999999999999998651 1123444
Q ss_pred EEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 109 QMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 109 ~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
-...+.+.|+++ .++.|+|.|..=...+.+++..++
T Consensus 283 l~~~s~nRvLLs--~~nkIyLld~~~~siLse~~~s~~ 318 (670)
T PF10395_consen 283 LKPPSPNRVLLS--VNNKIYLLDLKFESILSEFELSHP 318 (670)
T ss_pred eecCCCCeEEEE--cCCEEEEEeehhhhhhhhhhccCC
Confidence 445557777655 567899999886666777664443
No 321
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=90.56 E-value=7.9 Score=31.21 Aligned_cols=100 Identities=13% Similarity=0.074 Sum_probs=50.1
Q ss_pred eEEeCCeEEEEecCC--cEEEEEcC-CCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------------CeEE
Q psy16020 21 PVHVQGRVVCALADG--SVAIFRRG-PDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------------NKIH 84 (151)
Q Consensus 21 i~~~~~~v~vgl~nG--~l~v~~~~-~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------------n~I~ 84 (151)
-...+++||+..+.. .+.+|+.. ....|..-. ++......-.+++.++++||+-.| +.++
T Consensus 13 ~~~~~~~vyv~GG~~~~~~~~~d~~~~~~~W~~l~----~~p~~~R~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~ 88 (346)
T TIGR03547 13 GAIIGDKVYVGLGSAGTSWYKLDLKKPSKGWQKIA----DFPGGPRNQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVY 88 (346)
T ss_pred EEEECCEEEEEccccCCeeEEEECCCCCCCceECC----CCCCCCcccceEEEECCEEEEEeCCCCCCCCCcceecccEE
Confidence 334588999965432 35555542 234563211 111000112356667899987654 2488
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD 124 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d 124 (151)
.+|+.+.+=.+.-...+........+...+..+++.++.+
T Consensus 89 ~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~ 128 (346)
T TIGR03547 89 RYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN 128 (346)
T ss_pred EEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence 8998876533321112211111222224577888877653
No 322
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.47 E-value=0.45 Score=41.17 Aligned_cols=31 Identities=29% Similarity=0.420 Sum_probs=28.5
Q ss_pred CCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 114 GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 114 ~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+....++..+|..||+||..|+++++.+|+-
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~~ 259 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLATIDLL 259 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeccc
Confidence 6777889999999999999999999999875
No 323
>PRK01742 tolB translocation protein TolB; Provisional
Probab=90.31 E-value=9.2 Score=32.04 Aligned_cols=69 Identities=19% Similarity=0.146 Sum_probs=40.7
Q ss_pred CceEEEeee--CCEEE-EEeC---CeEEEEeCCCCcEE--EEEEecCCCCCceeEEEEeCCEE--EEEEcCCCe--EEEE
Q psy16020 63 HSVRSLAAV--YNKVW-CGYK---NKIHVVDPKSLVVL--KSFDAHPRRESQVRQMTWAGDGV--WVSIRLDST--LRMY 130 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw-~g~~---n~I~vid~~t~~i~--~~~~~h~~~~~~I~~m~~~~~~v--wis~~~d~~--l~lw 130 (151)
.++...... +++|. ++.+ ..|+++|.++++.. ..+.+| .....++++|- .++.++++. |.+|
T Consensus 204 ~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~------~~~~~wSPDG~~La~~~~~~g~~~Iy~~ 277 (429)
T PRK01742 204 QPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH------NGAPAFSPDGSRLAFASSKDGVLNIYVM 277 (429)
T ss_pred CccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc------cCceeECCCCCEEEEEEecCCcEEEEEE
Confidence 778877776 35554 4443 36999999988643 223333 23466776654 334445665 4555
Q ss_pred eCCccce
Q psy16020 131 NAHTYQH 137 (151)
Q Consensus 131 d~~t~~~ 137 (151)
|..+.+.
T Consensus 278 d~~~~~~ 284 (429)
T PRK01742 278 GANGGTP 284 (429)
T ss_pred ECCCCCe
Confidence 7665543
No 324
>KOG0644|consensus
Probab=90.30 E-value=0.15 Score=46.37 Aligned_cols=75 Identities=9% Similarity=0.110 Sum_probs=61.8
Q ss_pred CceEEEeee--CCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcccee
Q psy16020 63 HSVRSLAAV--YNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l 138 (151)
..|.|.++- +-.+..|+++ .++||..+|..+..+.-+|+- -|+.|+++.+.. -.+.++|-+||+|-..++.++
T Consensus 191 naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~---ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv 267 (1113)
T KOG0644|consen 191 NAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSG---DITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV 267 (1113)
T ss_pred hheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCcc---ccchhccchhhhhhhhcccCceEEEEecCCCchH
Confidence 557776663 4568888876 699999999999999999974 899999986666 678999999999999988776
Q ss_pred ee
Q psy16020 139 QD 140 (151)
Q Consensus 139 ~~ 140 (151)
.-
T Consensus 268 sv 269 (1113)
T KOG0644|consen 268 SV 269 (1113)
T ss_pred HH
Confidence 53
No 325
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=90.29 E-value=1.1 Score=23.16 Aligned_cols=26 Identities=19% Similarity=0.265 Sum_probs=20.8
Q ss_pred eCCEEEEEeC-CeEEEEeCCCCcEEEE
Q psy16020 71 VYNKVWCGYK-NKIHVVDPKSLVVLKS 96 (151)
Q Consensus 71 v~~~Lw~g~~-n~I~vid~~t~~i~~~ 96 (151)
.++.++++.. +.++.+|++++++.=+
T Consensus 5 ~~~~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 5 SDGTVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred ECCEEEEEcCCCEEEEEEcccCcEEEE
Confidence 3568898885 6999999999987644
No 326
>KOG1009|consensus
Probab=90.28 E-value=2.4 Score=35.72 Aligned_cols=123 Identities=16% Similarity=0.161 Sum_probs=74.6
Q ss_pred CceeeeEEeCC-eEEEE-ecCCcEEEEEcCCCCCCCCCc--------ce-EEEeCCCCCceEEEeeeC--CEEEEEe-CC
Q psy16020 16 DTALPPVHVQG-RVVCA-LADGSVAIFRRGPDGQWDLSK--------YH-TVTLGLPHHSVRSLAAVY--NKVWCGY-KN 81 (151)
Q Consensus 16 ~~V~~i~~~~~-~v~vg-l~nG~l~v~~~~~~~~wd~~~--------~~-~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n 81 (151)
.+|.++.+.++ .+.++ ..+|.+.+|...+-..-+.+. .. ...++.+..-|.-++-.. +.+-.|+ +|
T Consensus 66 ~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn 145 (434)
T KOG1009|consen 66 RAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN 145 (434)
T ss_pred ceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc
Confidence 47888888654 45554 445688888665211101111 11 123443334444444433 3466666 47
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.++.||...|++++.+..|.. .|+-.++++.+- ..+.+.|...+.+.+...+.++-+
T Consensus 146 s~~l~Dv~~G~l~~~~~dh~~---yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~ 203 (434)
T KOG1009|consen 146 SVRLWDVHAGQLLAILDDHEH---YVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRH 203 (434)
T ss_pred eEEEEEeccceeEeecccccc---ccceeecchhhhhhhhhccCcccceeeeeeeeeeeee
Confidence 899999999999999999964 777777775544 345666666777776665555544
No 327
>KOG2395|consensus
Probab=89.73 E-value=5.3 Score=35.09 Aligned_cols=100 Identities=17% Similarity=0.223 Sum_probs=71.6
Q ss_pred CCeEEEEecCCcEEEEEcCCCCC----CCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-CCeEEEEeCCCCcEEEE-E
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQ----WDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-KNKIHVVDPKSLVVLKS-F 97 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~----wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~n~I~vid~~t~~i~~~-~ 97 (151)
..+-|+||+|..|+-++....|. |+-.. +... +..-.|.+..+ +.+.+|+ ++.|..+|. .+.--++ |
T Consensus 394 ~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~k----qy~~-k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAl 467 (644)
T KOG2395|consen 394 SEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSK----QYST-KNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTAL 467 (644)
T ss_pred ccccEEeecCCceEEecccccCcceeeeeecc----cccc-ccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcc
Confidence 34689999999988887654443 32111 1111 25566777764 7899888 689999998 5554343 4
Q ss_pred EecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 98 DAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
.+- ...|.++..+-+|-||-+--++.|.|-|+.
T Consensus 468 PgL---G~~I~hVdvtadGKwil~Tc~tyLlLi~t~ 500 (644)
T KOG2395|consen 468 PGL---GDAIKHVDVTADGKWILATCKTYLLLIDTL 500 (644)
T ss_pred ccc---CCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence 444 458999999999999999999999999886
No 328
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=89.66 E-value=1.3 Score=38.37 Aligned_cols=76 Identities=14% Similarity=0.239 Sum_probs=44.2
Q ss_pred eCCeEEEEecCCcEEEEEcCC----CCCCCCCcceEE----------EeC-----CCCCceEEEee-----e-CCEEEEE
Q psy16020 24 VQGRVVCALADGSVAIFRRGP----DGQWDLSKYHTV----------TLG-----LPHHSVRSLAA-----V-YNKVWCG 78 (151)
Q Consensus 24 ~~~~v~vgl~nG~l~v~~~~~----~~~wd~~~~~~i----------~l~-----~~~~pV~~m~~-----v-~~~Lw~g 78 (151)
.++.+++++.||.|..+.+.. ++.|.......- ... ..........+ . .+.|++-
T Consensus 157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl 236 (547)
T PF11715_consen 157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL 236 (547)
T ss_dssp SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence 577899999999999999985 334533221100 000 00122222222 1 3678888
Q ss_pred eC-CeEEEEeCCCCcEEEEEEe
Q psy16020 79 YK-NKIHVVDPKSLVVLKSFDA 99 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~~~ 99 (151)
|. +++++||++|+++.+++..
T Consensus 237 ~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 237 SRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp ETTSEEEEEETTTTCEEEEEET
T ss_pred eCCCeEEEEECCCCeEEEEecc
Confidence 96 5899999999999777643
No 329
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=89.51 E-value=3 Score=33.19 Aligned_cols=64 Identities=14% Similarity=0.162 Sum_probs=44.4
Q ss_pred CCceeeeEEeC---------CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee------eCCEEEEEe
Q psy16020 15 LDTALPPVHVQ---------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA------VYNKVWCGY 79 (151)
Q Consensus 15 ~~~V~~i~~~~---------~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~------v~~~Lw~g~ 79 (151)
++.|+||.... ..+.+|+.+|.|.|.+-. .+.....+++.. -|+ +|.. ++-++.++|
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~-----af~il~~~~lps--vPv-~i~~~G~~devdyRI~Va~ 247 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQ-----AFTILKQVQLPS--VPV-FISVSGQYDEVDYRIVVAC 247 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECch-----hheeEEEEecCC--Cce-EEEEEeeeeccceEEEEEe
Confidence 36788886642 269999999999999864 234445667765 555 2222 456899999
Q ss_pred C-CeEEEE
Q psy16020 80 K-NKIHVV 86 (151)
Q Consensus 80 ~-n~I~vi 86 (151)
+ ++||.+
T Consensus 248 Rdg~iy~i 255 (257)
T PF14779_consen 248 RDGKIYTI 255 (257)
T ss_pred CCCEEEEE
Confidence 6 589987
No 330
>KOG1523|consensus
Probab=89.37 E-value=3.8 Score=33.71 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=82.2
Q ss_pred CCceeeeeeCCC-ceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee--eCCEEEEEe
Q psy16020 5 HPTPYPLNKILD-TALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA--VYNKVWCGY 79 (151)
Q Consensus 5 ~~~~l~~i~l~~-~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~--v~~~Lw~g~ 79 (151)
+++..+.++-+| .|+.|... .|++..+..|-.-.||+..++|.|.- .+..+.+. .-.+|+.- .+|+..+|+
T Consensus 44 ~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkp-tlvLlRiN---rAAt~V~WsP~enkFAVgS 119 (361)
T KOG1523|consen 44 LWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKP-TLVLLRIN---RAATCVKWSPKENKFAVGS 119 (361)
T ss_pred CceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeecc-ceeEEEec---cceeeEeecCcCceEEecc
Confidence 377888888775 77777664 46899999999999999888999953 22334443 55666655 468899999
Q ss_pred CCeEEEEeCCCCcEEEEEE--ec--CCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020 80 KNKIHVVDPKSLVVLKSFD--AH--PRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH 133 (151)
Q Consensus 80 ~n~I~vid~~t~~i~~~~~--~h--~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~ 133 (151)
|.++.-+.- ++-|..+= -| ..-.+.|+++..-+++| +.+++.|...|+|-+-
T Consensus 120 gar~isVcy--~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSay 176 (361)
T KOG1523|consen 120 GARLISVCY--YEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAY 176 (361)
T ss_pred CccEEEEEE--EecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEe
Confidence 876443322 22222220 01 11135799999999998 5566678888888664
No 331
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=89.30 E-value=11 Score=31.01 Aligned_cols=100 Identities=11% Similarity=0.015 Sum_probs=50.5
Q ss_pred eeEEeCCeEEEEecC--CcEEEEEcCC-CCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------------CeE
Q psy16020 20 PPVHVQGRVVCALAD--GSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------------NKI 83 (151)
Q Consensus 20 ~i~~~~~~v~vgl~n--G~l~v~~~~~-~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------------n~I 83 (151)
+....++.||++++. ..+.+|+... .+.|..-. ++..+...-.+++..+++||+-.| +.+
T Consensus 33 ~~~~~~~~iyv~gG~~~~~~~~~d~~~~~~~W~~l~----~~p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v 108 (376)
T PRK14131 33 TGAIDNNTVYVGLGSAGTSWYKLDLNAPSKGWTKIA----AFPGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDV 108 (376)
T ss_pred eEEEECCEEEEEeCCCCCeEEEEECCCCCCCeEECC----cCCCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccE
Confidence 344468899995543 3456666542 34563111 111101112245567889887543 348
Q ss_pred EEEeCCCCcEEEEEEecCCCCCceeEEEE-eCCEEEEEEcCC
Q psy16020 84 HVVDPKSLVVLKSFDAHPRRESQVRQMTW-AGDGVWVSIRLD 124 (151)
Q Consensus 84 ~vid~~t~~i~~~~~~h~~~~~~I~~m~~-~~~~vwis~~~d 124 (151)
+.||+.+.+-.+. .........=+.++. .++.+++.++.+
T Consensus 109 ~~YD~~~n~W~~~-~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 109 YKYDPKTNSWQKL-DTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred EEEeCCCCEEEeC-CCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 8999887653332 111111111123333 577888887753
No 332
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=89.20 E-value=14 Score=32.18 Aligned_cols=107 Identities=21% Similarity=0.300 Sum_probs=68.3
Q ss_pred CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeEEEEeCCCCcEEEEEEecC
Q psy16020 26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHVVDPKSLVVLKSFDAHP 101 (151)
Q Consensus 26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~ 101 (151)
+..++--+-|+..+++ .|+ ...++++.+ .-||.--+- ++.+..|. |+.+-|+|.++++.++--+.-
T Consensus 332 Gd~ia~VSRGkaFi~~-----~~~---~~~iqv~~~-~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~l- 401 (668)
T COG4946 332 GDYIALVSRGKAFIMR-----PWD---GYSIQVGKK-GGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDL- 401 (668)
T ss_pred CcEEEEEecCcEEEEC-----CCC---CeeEEcCCC-CceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCc-
Confidence 3444445556666664 242 357888864 558877664 34577776 469999999999987655533
Q ss_pred CCCCceeEEEEeCCEEEEEEcCC-----------CeEEEEeCCccceeeeEeCCc
Q psy16020 102 RRESQVRQMTWAGDGVWVSIRLD-----------STLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 102 ~~~~~I~~m~~~~~~vwis~~~d-----------~~l~lwd~~t~~~l~~idi~~ 145 (151)
..|.+|.++.+|-.+..+++ +.+++-|-..+-++-++++.|
T Consensus 402 ---g~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~ 453 (668)
T COG4946 402 ---GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHP 453 (668)
T ss_pred ---cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcC
Confidence 47999999988765444443 334444444455666666555
No 333
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=88.96 E-value=4.9 Score=31.95 Aligned_cols=64 Identities=17% Similarity=0.266 Sum_probs=43.9
Q ss_pred CCceEEEeeeC---------CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-----EEEEEEcCCCe
Q psy16020 62 HHSVRSLAAVY---------NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-----GVWVSIRLDST 126 (151)
Q Consensus 62 ~~pV~~m~~v~---------~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-----~vwis~~~d~~ 126 (151)
+..|+||.... +.|.+|..+ .|||+|++.+++.+++..-+- ++ .|...|. .-.+-..||+.
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsv---Pv-~i~~~G~~devdyRI~Va~Rdg~ 251 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSV---PV-FISVSGQYDEVDYRIVVACRDGK 251 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCC---ce-EEEEEeeeeccceEEEEEeCCCE
Confidence 36889999851 579999974 899999999999999886642 33 4444442 22344445555
Q ss_pred EEE
Q psy16020 127 LRM 129 (151)
Q Consensus 127 l~l 129 (151)
|++
T Consensus 252 iy~ 254 (257)
T PF14779_consen 252 IYT 254 (257)
T ss_pred EEE
Confidence 543
No 334
>KOG4640|consensus
Probab=88.83 E-value=4.2 Score=36.17 Aligned_cols=97 Identities=19% Similarity=0.179 Sum_probs=66.6
Q ss_pred ceeeeeeCCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceE-EEeee--CCEEEEEeC-
Q psy16020 7 TPYPLNKILDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVR-SLAAV--YNKVWCGYK- 80 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~-~m~~v--~~~Lw~g~~- 80 (151)
+.....++|.-+-.+.+++.+ +-.+..+|.|++++.+-..-| .+..|..+++ |+.-- ++-|.+|..
T Consensus 12 ~~~~~~~l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlw--------tip~p~~~v~~sL~W~~DGkllaVg~kd 83 (665)
T KOG4640|consen 12 ETNGVMSLPINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLW--------TIPIPGENVTASLCWRPDGKLLAVGFKD 83 (665)
T ss_pred hhhhhhccccceEEEEEcCccchhheeccCCcEEEEEeccceeE--------eccCCCCccceeeeecCCCCEEEEEecC
Confidence 344556778888888998876 555677899999987633333 3333448887 76664 355889996
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA 113 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~ 113 (151)
++|.+.|.+++.....+.... +..|.++.++
T Consensus 84 G~I~L~Dve~~~~l~~~~~s~--e~~is~~~w~ 114 (665)
T KOG4640|consen 84 GTIRLHDVEKGGRLVSFLFSV--ETDISKGIWD 114 (665)
T ss_pred CeEEEEEccCCCceecccccc--ccchheeecc
Confidence 599999999999888843221 2356666554
No 335
>PRK03629 tolB translocation protein TolB; Provisional
Probab=88.80 E-value=13 Score=31.22 Aligned_cols=101 Identities=14% Similarity=0.060 Sum_probs=57.3
Q ss_pred eEEEEecCC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe---C-CeEEEEeCCCCcEEE
Q psy16020 27 RVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY---K-NKIHVVDPKSLVVLK 95 (151)
Q Consensus 27 ~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~---~-n~I~vid~~t~~i~~ 95 (151)
-+|+.-..+ .|.+++.+ | .+++.+.-+. .++.+..... ++|...+ + ..|+++|..+++..+
T Consensus 166 iayv~~~~~~~~~~~l~~~d~d--g----~~~~~lt~~~--~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~ 237 (429)
T PRK03629 166 IAYVVQTNGGQFPYELRVSDYD--G----YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ 237 (429)
T ss_pred EEEEEeeCCCCcceeEEEEcCC--C----CCCEEeecCC--CceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE
Confidence 356665433 46665542 2 2344444443 6787777763 4554432 2 479999999987544
Q ss_pred EEEecCCCCCceeEEEEeCCEEEEE--EcCC--CeEEEEeCCccceee
Q psy16020 96 SFDAHPRRESQVRQMTWAGDGVWVS--IRLD--STLRMYNAHTYQHLQ 139 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~~vwis--~~~d--~~l~lwd~~t~~~l~ 139 (151)
-.. ... .+....++++|-.+. .+.+ ..|.+||..+.+..+
T Consensus 238 l~~-~~~---~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~ 281 (429)
T PRK03629 238 VAS-FPR---HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ 281 (429)
T ss_pred ccC-CCC---CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE
Confidence 322 111 233466776664333 3333 469999998866543
No 336
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=88.74 E-value=4.4 Score=35.53 Aligned_cols=72 Identities=10% Similarity=0.061 Sum_probs=46.4
Q ss_pred eeeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE-EEEEeC-CeE
Q psy16020 9 YPLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWCGYK-NKI 83 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~-Lw~g~~-n~I 83 (151)
+.+|.|++.|.|-... +.++.+|..||+|.+|+...+ .....+.. -..+.++-+ ++. +-+|++ |.+
T Consensus 253 vtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~------~t~~~ka~---~~P~~iaWHp~gai~~V~s~qGel 323 (545)
T PF11768_consen 253 VTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRG------VTLLAKAE---FIPTLIAWHPDGAIFVVGSEQGEL 323 (545)
T ss_pred EEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCC------eeeeeeec---ccceEEEEcCCCcEEEEEcCCceE
Confidence 4567788888887764 557999999999999997532 11222222 222344444 344 445554 789
Q ss_pred EEEeCC
Q psy16020 84 HVVDPK 89 (151)
Q Consensus 84 ~vid~~ 89 (151)
.+||..
T Consensus 324 Q~FD~A 329 (545)
T PF11768_consen 324 QCFDMA 329 (545)
T ss_pred EEEEee
Confidence 999965
No 337
>PRK04922 tolB translocation protein TolB; Provisional
Probab=88.74 E-value=12 Score=31.26 Aligned_cols=82 Identities=13% Similarity=0.019 Sum_probs=48.6
Q ss_pred cceEEEeCCCCCceEEEeee--CCEEEEEe---C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcC
Q psy16020 52 KYHTVTLGLPHHSVRSLAAV--YNKVWCGY---K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRL 123 (151)
Q Consensus 52 ~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~---~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~ 123 (151)
.++.+.-+. .++.+.... +++|+..+ + ..|+++|..+++..+ +.... .......++++| +.++.+.
T Consensus 195 ~~~~lt~~~--~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~---g~~~~~~~SpDG~~l~~~~s~ 268 (433)
T PRK04922 195 NPQTILRSA--EPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFR---GINGAPSFSPDGRRLALTLSR 268 (433)
T ss_pred CceEeecCC--CccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCC---CCccCceECCCCCEEEEEEeC
Confidence 344444333 677776665 35666554 2 369999999887643 22222 233456677555 4444444
Q ss_pred C--CeEEEEeCCccceee
Q psy16020 124 D--STLRMYNAHTYQHLQ 139 (151)
Q Consensus 124 d--~~l~lwd~~t~~~l~ 139 (151)
+ ..|++||..+.+..+
T Consensus 269 ~g~~~Iy~~d~~~g~~~~ 286 (433)
T PRK04922 269 DGNPEIYVMDLGSRQLTR 286 (433)
T ss_pred CCCceEEEEECCCCCeEE
Confidence 3 479999998876443
No 338
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=88.54 E-value=12 Score=30.42 Aligned_cols=94 Identities=9% Similarity=0.154 Sum_probs=59.4
Q ss_pred CeEEEEecC-CcEEEEEcC-CCCCCCCCcce-EEEeC-CCCCceEEEeeeCCEEEE-EeCC--eEEEEeCCCCcEEEEEE
Q psy16020 26 GRVVCALAD-GSVAIFRRG-PDGQWDLSKYH-TVTLG-LPHHSVRSLAAVYNKVWC-GYKN--KIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 26 ~~v~vgl~n-G~l~v~~~~-~~~~wd~~~~~-~i~l~-~~~~pV~~m~~v~~~Lw~-g~~n--~I~vid~~t~~i~~~~~ 98 (151)
+.+|++-+- +.|..|+.. .++. ..... .+... .+..|=-.-.=.++.||+ +.++ +|.+|+++ ++....++
T Consensus 175 ~tly~aDT~~~~i~r~~~d~~~g~--~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~ 251 (307)
T COG3386 175 KTLYVADTPANRIHRYDLDPATGP--IGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIK 251 (307)
T ss_pred CEEEEEeCCCCeEEEEecCcccCc--cCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEE
Confidence 368887764 678888775 2232 12221 12221 122444333335789994 4443 99999999 99888888
Q ss_pred ecCCCCCceeEEEEeC---CEEEEEEcCCC
Q psy16020 99 AHPRRESQVRQMTWAG---DGVWVSIRLDS 125 (151)
Q Consensus 99 ~h~~~~~~I~~m~~~~---~~vwis~~~d~ 125 (151)
... ..+++.++.| +.++++..+.+
T Consensus 252 lP~---~~~t~~~FgG~~~~~L~iTs~~~~ 278 (307)
T COG3386 252 LPV---KRPTNPAFGGPDLNTLYITSARSG 278 (307)
T ss_pred CCC---CCCccceEeCCCcCEEEEEecCCC
Confidence 663 3788888887 67788877763
No 339
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=88.39 E-value=1.1 Score=23.20 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=18.9
Q ss_pred EEeCCeEEEEecCCcEEEEEcCC
Q psy16020 22 VHVQGRVVCALADGSVAIFRRGP 44 (151)
Q Consensus 22 ~~~~~~v~vgl~nG~l~v~~~~~ 44 (151)
...++.+|++..+|.|.+++...
T Consensus 3 ~~~~~~v~~~~~~g~l~a~d~~~ 25 (33)
T smart00564 3 VLSDGTVYVGSTDGTLYALDAKT 25 (33)
T ss_pred EEECCEEEEEcCCCEEEEEEccc
Confidence 34566899999999999999753
No 340
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=88.37 E-value=4.4 Score=32.44 Aligned_cols=61 Identities=13% Similarity=0.140 Sum_probs=46.8
Q ss_pred CCeEEEEeCCCCcEEEEEEecCC---CCCceeEEEEeC-------CEEEEEEcCCCeEEEEeCCccceeee
Q psy16020 80 KNKIHVVDPKSLVVLKSFDAHPR---RESQVRQMTWAG-------DGVWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 80 ~n~I~vid~~t~~i~~~~~~h~~---~~~~I~~m~~~~-------~~vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
+.+|.+||++|.++.+++.-..+ ..+.++.+++.. .-++|+-...+-|-+||..+.+--.-
T Consensus 33 ~pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv 103 (287)
T PF03022_consen 33 PPKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRV 103 (287)
T ss_dssp --EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEE
T ss_pred CcEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEE
Confidence 35999999999999999885432 356899999985 24699999999999999998665443
No 341
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=88.19 E-value=4.7 Score=31.06 Aligned_cols=76 Identities=13% Similarity=0.109 Sum_probs=50.9
Q ss_pred EEEeCCCCCceEEEeeeCCEEEEEe-CCeEEEEeCCCCcEEEEE-Ee----cC------CCCCceeEEEEeCCEE-EEEE
Q psy16020 55 TVTLGLPHHSVRSLAAVYNKVWCGY-KNKIHVVDPKSLVVLKSF-DA----HP------RRESQVRQMTWAGDGV-WVSI 121 (151)
Q Consensus 55 ~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~I~vid~~t~~i~~~~-~~----h~------~~~~~I~~m~~~~~~v-wis~ 121 (151)
.+.+| +|+-.|...++.|-|-+ .+.+||||.++++..-.- .. .. .....|.......+|+ .++.
T Consensus 8 ~i~Lg---s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l 84 (219)
T PF07569_consen 8 PIVLG---SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL 84 (219)
T ss_pred cEecC---CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE
Confidence 35565 56666777777755554 689999999998854332 10 00 2334677777877787 7777
Q ss_pred cCCCeEEEEeCCc
Q psy16020 122 RLDSTLRMYNAHT 134 (151)
Q Consensus 122 ~~d~~l~lwd~~t 134 (151)
++ +..+.||..-
T Consensus 85 sn-g~~y~y~~~L 96 (219)
T PF07569_consen 85 SN-GDSYSYSPDL 96 (219)
T ss_pred eC-CCEEEecccc
Confidence 76 5678888773
No 342
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=87.93 E-value=3.1 Score=35.64 Aligned_cols=86 Identities=9% Similarity=0.144 Sum_probs=51.4
Q ss_pred CCCCceeeeeeCC---CceeeeEEeC----CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCC-----C-c----
Q psy16020 3 YPHPTPYPLNKIL---DTALPPVHVQ----GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPH-----H-S---- 64 (151)
Q Consensus 3 ~~~~~~l~~i~l~---~~V~~i~~~~----~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~-----~-p---- 64 (151)
.+.++.++.|.|+ ..++.|.+.- ++-|||.+ .++|-.|-+..+|.|..+ +.+++...+ . +
T Consensus 229 ~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~--kVi~ip~~~v~~~~lp~ml~~ 306 (461)
T PF05694_consen 229 WSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAE--KVIDIPAKKVEGWILPEMLKP 306 (461)
T ss_dssp TTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEE--EEEEE--EE--SS---GGGGG
T ss_pred CCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeee--EEEECCCcccCcccccccccc
Confidence 3567889999999 3788888743 35555554 346777767678999654 566665410 1 1
Q ss_pred -------eEEEeee-CC-EEEEEeC--CeEEEEeCCC
Q psy16020 65 -------VRSLAAV-YN-KVWCGYK--NKIHVVDPKS 90 (151)
Q Consensus 65 -------V~~m~~v-~~-~Lw~g~~--n~I~vid~~t 90 (151)
|+-|.+. ++ .||++|. +.|.-+|...
T Consensus 307 ~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 307 FGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp G-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred cccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence 3555554 44 4999996 6899999764
No 343
>PRK05137 tolB translocation protein TolB; Provisional
Probab=87.91 E-value=15 Score=30.78 Aligned_cols=70 Identities=16% Similarity=0.083 Sum_probs=40.5
Q ss_pred CceEEEeee--CCEEEEEe---C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE--EEcC--CCeEEEEeC
Q psy16020 63 HSVRSLAAV--YNKVWCGY---K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV--SIRL--DSTLRMYNA 132 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~---~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi--s~~~--d~~l~lwd~ 132 (151)
.++.+.... +++|.... + ..||++|+++++.. ++..+. .......++++|-++ +..+ +..|.++|.
T Consensus 246 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~---~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~ 321 (435)
T PRK05137 246 GMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT-RLTDSP---AIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 321 (435)
T ss_pred CcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE-EccCCC---CccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence 445444454 45665443 2 36999999998764 354343 234456667655333 3223 347888898
Q ss_pred Cccc
Q psy16020 133 HTYQ 136 (151)
Q Consensus 133 ~t~~ 136 (151)
.+.+
T Consensus 322 ~g~~ 325 (435)
T PRK05137 322 DGSN 325 (435)
T ss_pred CCCC
Confidence 7654
No 344
>PRK03629 tolB translocation protein TolB; Provisional
Probab=87.68 E-value=16 Score=30.77 Aligned_cols=71 Identities=8% Similarity=-0.043 Sum_probs=40.5
Q ss_pred CceEEEeee--CCEEEEEeC----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE--EEcCC--CeEEEEeC
Q psy16020 63 HSVRSLAAV--YNKVWCGYK----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV--SIRLD--STLRMYNA 132 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi--s~~~d--~~l~lwd~ 132 (151)
..+...... +++|...+. .+||++|+++++..+ +..+. .......++++|-++ +..++ ..|.+||.
T Consensus 287 ~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~-lt~~~---~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl 362 (429)
T PRK03629 287 SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQR-ITWEG---SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 362 (429)
T ss_pred CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEE-eecCC---CCccCEEECCCCCEEEEEEccCCCceEEEEEC
Confidence 344444444 356766653 279999999887643 33222 234455666655433 33332 46889998
Q ss_pred Cccce
Q psy16020 133 HTYQH 137 (151)
Q Consensus 133 ~t~~~ 137 (151)
.+.+.
T Consensus 363 ~~g~~ 367 (429)
T PRK03629 363 ATGGV 367 (429)
T ss_pred CCCCe
Confidence 87653
No 345
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=87.29 E-value=16 Score=30.35 Aligned_cols=103 Identities=16% Similarity=0.213 Sum_probs=69.7
Q ss_pred CCeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeC----CeEEEEeCCCCcEEEEEE
Q psy16020 25 QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYK----NKIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 25 ~~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~----n~I~vid~~t~~i~~~~~ 98 (151)
.+++|+...+ +.+.+++... ....+.+.+|. .|..--.- .++.+|++-. ++|.++|..|.++.++..
T Consensus 85 ~~~vyv~~~~~~~v~vid~~~-----~~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~ 157 (381)
T COG3391 85 GNKVYVTTGDSNTVSVIDTAT-----NTVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIP 157 (381)
T ss_pred CCeEEEecCCCCeEEEEcCcc-----cceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEe
Confidence 4568888866 7788887321 12334556665 44322222 2468998874 589999999999888855
Q ss_pred ecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCcccee
Q psy16020 99 AHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 99 ~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l 138 (151)
.-.. + ..++.. |..+|++-..++.|.+.|..+-+..
T Consensus 158 vG~~---P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~ 195 (381)
T COG3391 158 VGNT---P-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV 195 (381)
T ss_pred cCCC---c-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence 4432 3 556666 5557888889999999998876555
No 346
>KOG1912|consensus
Probab=86.98 E-value=1.5 Score=40.00 Aligned_cols=70 Identities=20% Similarity=0.286 Sum_probs=55.6
Q ss_pred CEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-----CCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 73 NKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-----GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 73 ~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-----~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.++-.+++ ++|.++|-........|+-|.+ +|..|.+. ...++++...+++|-||++.|++.+.+.|-+
T Consensus 78 ~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~---~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys 154 (1062)
T KOG1912|consen 78 SQLLIASADISGRIILVDFVLASVINWLSHSND---SVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYS 154 (1062)
T ss_pred cceeEEeccccCcEEEEEehhhhhhhhhcCCCc---chhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccC
Confidence 34555553 6899999999999999996665 77887776 2267899999999999999999988776654
Q ss_pred c
Q psy16020 145 P 145 (151)
Q Consensus 145 ~ 145 (151)
+
T Consensus 155 ~ 155 (1062)
T KOG1912|consen 155 H 155 (1062)
T ss_pred C
Confidence 4
No 347
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=86.95 E-value=19 Score=30.88 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=37.7
Q ss_pred eeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC--CEEEEEeCCeEEEE
Q psy16020 10 PLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY--NKVWCGYKNKIHVV 86 (151)
Q Consensus 10 ~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vi 86 (151)
.++++|-++..|.. |.++.-.+++.|+.|++.. .+.+ ++.- .||+.+.-.+ +.+...+.+.|+++
T Consensus 103 k~i~~~~~~~~If~--G~LL~~~~~~~i~~yDw~~--------~~~i~~i~v--~~vk~V~Ws~~g~~val~t~~~i~il 170 (443)
T PF04053_consen 103 KSIKLPFSVEKIFG--GNLLGVKSSDFICFYDWET--------GKLIRRIDV--SAVKYVIWSDDGELVALVTKDSIYIL 170 (443)
T ss_dssp -----SS-EEEEE---SSSEEEEETTEEEEE-TTT----------EEEEESS---E-EEEEE-TTSSEEEEE-S-SEEEE
T ss_pred eEEcCCcccceEEc--CcEEEEECCCCEEEEEhhH--------cceeeEEec--CCCcEEEEECCCCEEEEEeCCeEEEE
Confidence 46777777888877 6776666788999998752 2233 3333 5688888874 57888888888888
Q ss_pred eCC
Q psy16020 87 DPK 89 (151)
Q Consensus 87 d~~ 89 (151)
+-+
T Consensus 171 ~~~ 173 (443)
T PF04053_consen 171 KYN 173 (443)
T ss_dssp EE-
T ss_pred Eec
Confidence 643
No 348
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=86.44 E-value=14 Score=28.95 Aligned_cols=136 Identities=10% Similarity=0.142 Sum_probs=80.6
Q ss_pred CCCCceeeeeeCC-Cceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020 3 YPHPTPYPLNKIL-DTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG 78 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~--i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g 78 (151)
..+.+.+++-+|+ +.+|- |.-.++++|.=.= +|.-.+|+.+ +++....+... .-=-.+..-++.||-+
T Consensus 75 L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~-----t~~~lg~~~y~---GeGWgLt~d~~~Lims 146 (262)
T COG3823 75 LTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDAD-----TLEELGRFSYE---GEGWGLTSDDKNLIMS 146 (262)
T ss_pred ccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChH-----HhhhhcccccC---CcceeeecCCcceEee
Confidence 3455777777777 44442 3334445554332 2333333322 11111111111 1112233335679999
Q ss_pred eCC-eEEEEeCCCCcEEEEEEecCC--CCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 79 YKN-KIHVVDPKSLVVLKSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 79 ~~n-~I~vid~~t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
.|+ .++--|++|+...++.++.-+ +-+.++-+++...-++.-.=.+..|-.-|..+++.+.-||+++-
T Consensus 147 dGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sGrV~~widlS~L 217 (262)
T COG3823 147 DGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSGRVVAWIDLSGL 217 (262)
T ss_pred CCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCCcEEEEEEccCC
Confidence 997 799999999998888775422 13356777777665555555566788889999999999998864
No 349
>KOG1645|consensus
Probab=86.29 E-value=4.2 Score=34.46 Aligned_cols=68 Identities=22% Similarity=0.258 Sum_probs=53.2
Q ss_pred CceEEEeeeC-CE--EEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCc
Q psy16020 63 HSVRSLAAVY-NK--VWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 63 ~pV~~m~~v~-~~--Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t 134 (151)
.-||.|++.. ++ +-.++ ||+|.|+|.+|-.+..++.+|. ++-...++ ...+..++...+.|.+||.+.
T Consensus 194 ~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~----~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 194 SFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYN----QIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred hhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccC----CceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 6788888864 33 44444 8999999999999999999994 55554444 556677999999999999995
No 350
>KOG2066|consensus
Probab=86.25 E-value=16 Score=33.50 Aligned_cols=88 Identities=14% Similarity=0.058 Sum_probs=63.5
Q ss_pred CceeeeeeCCCceeeeEEeCC-------eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020 6 PTPYPLNKILDTALPPVHVQG-------RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG 78 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~-------~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g 78 (151)
.+-.+++...-++.+|..+++ +.++|+--| |..|+++=-|.|+ .+.+..-..||+|+.-.++-+.-+
T Consensus 103 ~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~-----~v~l~~~eG~I~~i~W~g~lIAWa 176 (846)
T KOG2066|consen 103 DDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKD-----SVVLSEGEGPIHSIKWRGNLIAWA 176 (846)
T ss_pred CccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcc-----ceeeecCccceEEEEecCcEEEEe
Confidence 334455556667777766654 577777778 9999987555553 223443359999999999987667
Q ss_pred eCCeEEEEeCCCCcEEEEEEe
Q psy16020 79 YKNKIHVVDPKSLVVLKSFDA 99 (151)
Q Consensus 79 ~~n~I~vid~~t~~i~~~~~~ 99 (151)
.+--|.|+|+.+.+....++-
T Consensus 177 nd~Gv~vyd~~~~~~l~~i~~ 197 (846)
T KOG2066|consen 177 NDDGVKVYDTPTRQRLTNIPP 197 (846)
T ss_pred cCCCcEEEeccccceeeccCC
Confidence 777899999999998888773
No 351
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=85.98 E-value=18 Score=29.77 Aligned_cols=136 Identities=10% Similarity=0.022 Sum_probs=88.1
Q ss_pred CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe-CCe
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY-KNK 82 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~ 82 (151)
++.-.|-.|.+++.+.++...++++|++=.+.-|.+++.. +.+.|..+..-+-..=-++..+.++..|++- .+-
T Consensus 75 t~~~l~~~i~~~~l~~Dv~vse~yvyvad~ssGL~IvDIS-----~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddg 149 (370)
T COG5276 75 THDVLLSVINARDLFADVRVSEEYVYVADWSSGLRIVDIS-----TPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDG 149 (370)
T ss_pred cCcceEEEEehhhhhheeEecccEEEEEcCCCceEEEecc-----CCCCcceeccccCCceEEEEEecCCEEEEeeccCc
Confidence 3566778889999999999999999999888889999875 3344443322110011245555578899988 456
Q ss_pred EEEEeCCC---CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC---ccceeeeEeCCcccc
Q psy16020 83 IHVVDPKS---LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH---TYQHLQDVDIEPYVS 148 (151)
Q Consensus 83 I~vid~~t---~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~---t~~~l~~idi~~~v~ 148 (151)
..++|..+ =++..+.+... .--+.+..+|+.-+++..+.+ |.+-|.. +-.++...|..|.++
T Consensus 150 fLivdvsdpssP~lagrya~~~---~d~~~v~ISGn~AYvA~~d~G-L~ivDVSnp~sPvli~~~n~g~g~~ 217 (370)
T COG5276 150 FLIVDVSDPSSPQLAGRYALPG---GDTHDVAISGNYAYVAWRDGG-LTIVDVSNPHSPVLIGSYNTGPGTY 217 (370)
T ss_pred EEEEECCCCCCceeeeeeccCC---CCceeEEEecCeEEEEEeCCC-eEEEEccCCCCCeEEEEEecCCceE
Confidence 66777553 34555555332 123677788888777765544 5555554 466666677665443
No 352
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=85.55 E-value=2.6 Score=37.24 Aligned_cols=97 Identities=16% Similarity=0.347 Sum_probs=64.1
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CC-CceEEEee-eCCEEEEEeCCeEEEEeCCCC
Q psy16020 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PH-HSVRSLAA-VYNKVWCGYKNKIHVVDPKSL 91 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~-~pV~~m~~-v~~~Lw~g~~n~I~vid~~t~ 91 (151)
.+|..|... .|.+|+|.-+| |..|+- ..-+.+.+.. +. ++|..|.. ..++||+|.+.-|++.++++-
T Consensus 165 ~~V~aLv~D~~g~lWvgT~dG-L~~fd~--------~~gkalql~s~~~dk~I~al~~d~qg~LWVGTdqGv~~~e~~G~ 235 (671)
T COG3292 165 TPVVALVFDANGRLWVGTPDG-LSYFDA--------GRGKALQLASPPLDKAINALIADVQGRLWVGTDQGVYLQEAEGW 235 (671)
T ss_pred ccceeeeeeccCcEEEecCCc-ceEEcc--------ccceEEEcCCCcchhhHHHHHHHhcCcEEEEeccceEEEchhhc
Confidence 478888774 56899999777 455543 2335566654 22 67777776 478999999999999998884
Q ss_pred cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcC
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRL 123 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~ 123 (151)
.....+..-+ ...|..+..++.| .|+...+
T Consensus 236 ~~sn~~~~lp--~~~I~ll~qD~qG~lWiGTen 266 (671)
T COG3292 236 RASNWGPMLP--SGNILLLVQDAQGELWIGTEN 266 (671)
T ss_pred cccccCCCCc--chheeeeecccCCCEEEeecc
Confidence 4433333222 3467777777554 3766554
No 353
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=85.53 E-value=3.9 Score=23.51 Aligned_cols=36 Identities=11% Similarity=0.219 Sum_probs=27.5
Q ss_pred ceeEEEEeC-CE---EEEEEcCCCeEEEEeCC-ccceeeeE
Q psy16020 106 QVRQMTWAG-DG---VWVSIRLDSTLRMYNAH-TYQHLQDV 141 (151)
Q Consensus 106 ~I~~m~~~~-~~---vwis~~~d~~l~lwd~~-t~~~l~~i 141 (151)
.|.+|.+++ .+ +++-....+.+.++|++ ++..-|-|
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~f~~~QVi 42 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSNFMRRQVI 42 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccCccceEee
Confidence 578899983 33 66667778999999999 57766655
No 354
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=85.03 E-value=2.7 Score=37.14 Aligned_cols=105 Identities=21% Similarity=0.374 Sum_probs=68.1
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEE--ecC
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFD--AHP 101 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~--~h~ 101 (151)
++.+|+|..+.-|.-|+.+. .|- +..-.-+-+.++|+.|..- ++.||+|..+-|.-.+++.++++..+. .|.
T Consensus 386 ~g~lWlgs~q~GLsrl~n~n--~~a---vlde~agl~ss~V~aived~dnsLWIGTs~Glvk~~pe~~~v~n~ln~~~~~ 460 (671)
T COG3292 386 RGRLWLGSMQNGLSRLDNKN--EWA---VLDEDAGLPSSEVSAIVEDPDNSLWIGTSGGLVKRDPESGRVLNLLNPGSHG 460 (671)
T ss_pred CCcEEEEecccchhhhccCC--ccc---ccccccCCcccceeeeeecCCCCEEEeccCCeEecCccccchhcccccccCc
Confidence 66899999885555555432 231 1111223345888888774 577999999888888999988877754 444
Q ss_pred CCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020 102 RRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 102 ~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~ 136 (151)
...+.|..+.+..+|- |++... -|..|+.+..-
T Consensus 461 l~~s~~~~lg~~~~g~Lw~a~g~--gva~~~sq~~~ 494 (671)
T COG3292 461 LDGSRVEQLGLGPDGRLWLAAGS--GVAAWESQRRM 494 (671)
T ss_pred CCcchhhhhccCCCCceEEEecc--eeeeeccccce
Confidence 4456677777776554 765543 24777776533
No 355
>PRK01742 tolB translocation protein TolB; Provisional
Probab=84.45 E-value=20 Score=30.00 Aligned_cols=65 Identities=5% Similarity=-0.129 Sum_probs=40.5
Q ss_pred CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC--ccceeeeE
Q psy16020 72 YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH--TYQHLQDV 141 (151)
Q Consensus 72 ~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~--t~~~l~~i 141 (151)
++.|+.++++.|+++|+.+++.+.-...+. .....++++|- +++.+.++..++|+.. +++..+.+
T Consensus 344 G~~ia~~~~~~i~~~Dl~~g~~~~lt~~~~-----~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l 411 (429)
T PRK01742 344 GKTLVMINGDNVVKQDLTSGSTEVLSSTFL-----DESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARL 411 (429)
T ss_pred CCEEEEEcCCCEEEEECCCCCeEEecCCCC-----CCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEc
Confidence 466887777889999999988654333221 23344666654 4555566766766643 36666655
No 356
>KOG0379|consensus
Probab=84.03 E-value=26 Score=30.17 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=65.2
Q ss_pred eeEEeCCeEEEEecCC-------cEEEEEcCCCCCCCCCcceEEEeCC-C-CCceEEEeeeCCEEEEE--e------CCe
Q psy16020 20 PPVHVQGRVVCALADG-------SVAIFRRGPDGQWDLSKYHTVTLGL-P-HHSVRSLAAVYNKVWCG--Y------KNK 82 (151)
Q Consensus 20 ~i~~~~~~v~vgl~nG-------~l~v~~~~~~~~wd~~~~~~i~l~~-~-~~pV~~m~~v~~~Lw~g--~------~n~ 82 (151)
++...++++|+-.+.- .|..|+.. .+.|.+-.+ .++ | ..-=.+++.++++||+= + -|.
T Consensus 117 ~~~~~~~~l~lfGG~~~~~~~~~~l~~~d~~-t~~W~~l~~----~~~~P~~r~~Hs~~~~g~~l~vfGG~~~~~~~~nd 191 (482)
T KOG0379|consen 117 SLSAVGDKLYLFGGTDKKYRNLNELHSLDLS-TRTWSLLSP----TGDPPPPRAGHSATVVGTKLVVFGGIGGTGDSLND 191 (482)
T ss_pred eEEEECCeEEEEccccCCCCChhheEeccCC-CCcEEEecC----cCCCCCCcccceEEEECCEEEEECCccCcccceee
Confidence 3444455655544443 56666653 355643322 222 1 13335666678887642 2 267
Q ss_pred EEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeCCEEEEEEcCC------CeEEEEeCCc
Q psy16020 83 IHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAGDGVWVSIRLD------STLRMYNAHT 134 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~~~vwis~~~d------~~l~lwd~~t 134 (151)
++++|+++.+-.+-... .......=+.|+..++..|+.++.+ +-+.+.|..+
T Consensus 192 l~i~d~~~~~W~~~~~~g~~P~pR~gH~~~~~~~~~~v~gG~~~~~~~l~D~~~ldl~~ 250 (482)
T KOG0379|consen 192 LHIYDLETSTWSELDTQGEAPSPRYGHAMVVVGNKLLVFGGGDDGDVYLNDVHILDLST 250 (482)
T ss_pred eeeeccccccceecccCCCCCCCCCCceEEEECCeEEEEeccccCCceecceEeeeccc
Confidence 99999999884443332 2222345678888899999888887 3466677766
No 357
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=83.90 E-value=7.6 Score=35.26 Aligned_cols=70 Identities=24% Similarity=0.405 Sum_probs=50.2
Q ss_pred CceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEE------EEE--------------ecCCCCCceeEEEEe---CCEEEE
Q psy16020 63 HSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLK------SFD--------------AHPRRESQVRQMTWA---GDGVWV 119 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~------~~~--------------~h~~~~~~I~~m~~~---~~~vwi 119 (151)
.-..|+.. .+-|++|+++.|+|++++...-.. .+. ..+ ....|+.|... +..|++
T Consensus 41 NNLtalsq-~n~LFiA~~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p-~PHtIN~i~v~~lg~~EVLl 118 (717)
T PF08728_consen 41 NNLTALSQ-RNLLFIAYQSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWP-FPHTINFIKVGDLGGEEVLL 118 (717)
T ss_pred cceeEEec-CCEEEEEECCEEEEEecCCcccccccccccccccCccccccccccccCCC-CCceeeEEEecccCCeeEEE
Confidence 44555555 778999999999999987543211 111 011 23569999887 678899
Q ss_pred EEcCCCeEEEEeCCc
Q psy16020 120 SIRLDSTLRMYNAHT 134 (151)
Q Consensus 120 s~~~d~~l~lwd~~t 134 (151)
.+.+||.|.+|-+++
T Consensus 119 ~c~DdG~V~~Yyt~~ 133 (717)
T PF08728_consen 119 LCTDDGDVLAYYTET 133 (717)
T ss_pred EEecCCeEEEEEHHH
Confidence 999999999998864
No 358
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=83.81 E-value=14 Score=26.62 Aligned_cols=106 Identities=17% Similarity=0.196 Sum_probs=69.0
Q ss_pred eEEEEecCCcEEEEEcCCCCC----CCCCcceEEEeCCCCCceEEEeee-------CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020 27 RVVCALADGSVAIFRRGPDGQ----WDLSKYHTVTLGLPHHSVRSLAAV-------YNKVWCGYKNKIHVVDPKSLVVLK 95 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~----wd~~~~~~i~l~~~~~pV~~m~~v-------~~~Lw~g~~n~I~vid~~t~~i~~ 95 (151)
.+-+|..-|+|.|++....+. ++ +....+.++ +.|+||+.- .+.|.+|+.+.+.++|.+.-.-.-
T Consensus 12 cL~~aT~~gKV~IH~ph~~~~~~~~~~-~~i~~LNin---~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~F 87 (136)
T PF14781_consen 12 CLACATTGGKVFIHNPHERGQRTGRQD-SDISFLNIN---QEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLF 87 (136)
T ss_pred eEEEEecCCEEEEECCCcccccccccc-CceeEEECC---CceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhh
Confidence 577888899999997653221 21 122344554 789999763 267999999999999988544222
Q ss_pred EEEecCCCCCceeEEEEe--C--CEEEEEEcCCCeEEEEeCCccceeee
Q psy16020 96 SFDAHPRRESQVRQMTWA--G--DGVWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~--~--~~vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
.-+.+ | -|++|.+. + ..-|+-.+..+.|.=||.+--|....
T Consensus 88 yke~~-D---Gvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt 132 (136)
T PF14781_consen 88 YKEVP-D---GVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT 132 (136)
T ss_pred hhhCc-c---ceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence 22222 3 67777774 1 12367777778888888775555443
No 359
>KOG1538|consensus
Probab=83.80 E-value=3.7 Score=37.09 Aligned_cols=123 Identities=15% Similarity=0.179 Sum_probs=72.9
Q ss_pred CCceeeeeeCC-CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC
Q psy16020 5 HPTPYPLNKIL-DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK 80 (151)
Q Consensus 5 ~~~~l~~i~l~-~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~ 80 (151)
....|+.+|=+ |.|.|..|. ++..|++.+ |-.+.+|+-.-. ..++.+ +...|.||.++. ++.-++|.
T Consensus 42 dG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klE--------G~LkYS-H~D~IQCMsFNP~~h~LasCs 112 (1081)
T KOG1538|consen 42 DGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE--------GILKYS-HNDAIQCMSFNPITHQLASCS 112 (1081)
T ss_pred CcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccc--------ceeeec-cCCeeeEeecCchHHHhhhcc
Confidence 45567778744 899999995 557777654 445666654322 344544 347899999986 55556665
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+..-.|.++...+.+ |. ....+.+-.+..+|- ++-+--+++|.+-+.. +|.--.|+
T Consensus 113 LsdFglWS~~qK~V~K----~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~ 170 (1081)
T KOG1538|consen 113 LSDFGLWSPEQKSVSK----HK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIE 170 (1081)
T ss_pred hhhccccChhhhhHHh----hh-hheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEe
Confidence 455566665443322 21 122455555556665 5555567887777543 55544443
No 360
>KOG1523|consensus
Probab=83.46 E-value=23 Score=29.31 Aligned_cols=115 Identities=11% Similarity=0.078 Sum_probs=75.9
Q ss_pred CCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeC
Q psy16020 14 ILDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDP 88 (151)
Q Consensus 14 l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~ 88 (151)
+..+|+|..+..++ +-++-.|-.|-||+......|.. .+ .+..+..+|+++.-. .++|-.++ +.+=|||..
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~--~h--tls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEP--AH--TLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCcee--ce--ehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence 66899999997664 66677677999999875544632 12 444455899997775 36766555 457899987
Q ss_pred -CCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020 89 -KSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH 133 (151)
Q Consensus 89 -~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~ 133 (151)
+.++=+.++..- +-....+++..++..- +..++....|.+|=-+
T Consensus 85 ~~~~~WkptlvLl-RiNrAAt~V~WsP~enkFAVgSgar~isVcy~E 130 (361)
T KOG1523|consen 85 PSGGTWKPTLVLL-RINRAATCVKWSPKENKFAVGSGARLISVCYYE 130 (361)
T ss_pred CCCCeeccceeEE-EeccceeeEeecCcCceEEeccCccEEEEEEEe
Confidence 555555554421 1124888888885543 6667777777776444
No 361
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=83.24 E-value=19 Score=30.90 Aligned_cols=100 Identities=16% Similarity=0.214 Sum_probs=63.6
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C--EEEEEe--CC-eEEEEeCCCCcEEEEEE
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N--KVWCGY--KN-KIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~--~Lw~g~--~n-~I~vid~~t~~i~~~~~ 98 (151)
..+++.+..+|.|.......++. ....-.+|.-..+-.++...+ + .|++|+ |+ .++-+....+++..++.
T Consensus 222 ~~~~lL~~e~G~l~~l~l~~~~~----~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~ 297 (504)
T PF10433_consen 222 GDRILLQDEDGDLYLLTLDNDGG----SISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLP 297 (504)
T ss_dssp SSEEEEEETTSEEEEEEEEEEEE----EEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE-
T ss_pred CCEEEEEeCCCeEEEEEEEECCC----eEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEecc
Confidence 45799999999999988765442 112233442125667888875 5 899999 34 68888888888888888
Q ss_pred ecCCCCCceeEEEEeCC------------EEEEEEc--CCCeEEEEeC
Q psy16020 99 AHPRRESQVRQMTWAGD------------GVWVSIR--LDSTLRMYNA 132 (151)
Q Consensus 99 ~h~~~~~~I~~m~~~~~------------~vwis~~--~d~~l~lwd~ 132 (151)
-- .+|..|+.... .+|.+.+ +++.|++..-
T Consensus 298 N~----~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~ 341 (504)
T PF10433_consen 298 NW----GPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRN 341 (504)
T ss_dssp -------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEE
T ss_pred Cc----CCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEec
Confidence 44 48888888622 4555544 4777887643
No 362
>KOG2114|consensus
Probab=83.21 E-value=33 Score=31.86 Aligned_cols=83 Identities=10% Similarity=0.038 Sum_probs=62.4
Q ss_pred eeCCCceeeeEEeCC-e--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEEE
Q psy16020 12 NKILDTALPPVHVQG-R--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVV 86 (151)
Q Consensus 12 i~l~~~V~~i~~~~~-~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vi 86 (151)
.+..+||+-|.+... . +||++ --.|..|... |. .|....+.....|++|-.+.+ .++-||.++.++.+
T Consensus 168 ~~~~~pITgL~~~~d~~s~lFv~T-t~~V~~y~l~--gr----~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY 240 (933)
T KOG2114|consen 168 HRGKEPITGLALRSDGKSVLFVAT-TEQVMLYSLS--GR----TPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFY 240 (933)
T ss_pred ccCCCCceeeEEecCCceeEEEEe-cceeEEEEec--CC----CcceeeeccCCccceeeecCCCCccEEEecCceEEEE
Confidence 345579999988543 2 69999 4588888875 31 244444555458999999985 45889999999999
Q ss_pred eCCCCcEEEEEE-ecC
Q psy16020 87 DPKSLVVLKSFD-AHP 101 (151)
Q Consensus 87 d~~t~~i~~~~~-~h~ 101 (151)
|++..+..-.|+ +|+
T Consensus 241 ~sd~~~~cfaf~~g~k 256 (933)
T KOG2114|consen 241 DSDGRGPCFAFEVGEK 256 (933)
T ss_pred cCCCcceeeeecCCCe
Confidence 999999999999 664
No 363
>KOG1064|consensus
Probab=83.01 E-value=1.8 Score=42.88 Aligned_cols=72 Identities=11% Similarity=0.177 Sum_probs=55.3
Q ss_pred CCceEEEeeeCCE-EEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020 62 HHSVRSLAAVYNK-VWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 62 ~~pV~~m~~v~~~-Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l 138 (151)
.+.++|++++.++ |...+| +.|++||++-.|..++|++ + ....-+++++..+.+++|+...+.++
T Consensus 2336 ~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~----------~--~~~~~f~~~ss~g~ikIw~~s~~~ll 2403 (2439)
T KOG1064|consen 2336 DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA----------L--DTREYFVTGSSEGNIKIWRLSEFGLL 2403 (2439)
T ss_pred CCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh----------h--hhhheeeccCcccceEEEEccccchh
Confidence 3889999999754 776665 6899999998887776665 1 12333778899999999999999888
Q ss_pred eeEeCCc
Q psy16020 139 QDVDIEP 145 (151)
Q Consensus 139 ~~idi~~ 145 (151)
..+-.+.
T Consensus 2404 ~~~p~e~ 2410 (2439)
T KOG1064|consen 2404 HTFPSEH 2410 (2439)
T ss_pred hcCchhh
Confidence 8775443
No 364
>PRK02889 tolB translocation protein TolB; Provisional
Probab=82.93 E-value=27 Score=29.28 Aligned_cols=69 Identities=19% Similarity=0.125 Sum_probs=41.7
Q ss_pred CceEEEeee--CCEEEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEE--eC
Q psy16020 63 HSVRSLAAV--YNKVWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMY--NA 132 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lw--d~ 132 (151)
.++.+.... +++|...+ + ..|+++|..+++..+ +.... ..+....++++| +.++.++++..++| |.
T Consensus 196 ~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~---g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~ 271 (427)
T PRK02889 196 EPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFK---GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNA 271 (427)
T ss_pred CCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCC---CCccceEECCCCCEEEEEEccCCCceEEEEEC
Confidence 677776665 35666554 2 369999999998654 33222 245567777665 44455666654544 55
Q ss_pred Ccc
Q psy16020 133 HTY 135 (151)
Q Consensus 133 ~t~ 135 (151)
.+.
T Consensus 272 ~~~ 274 (427)
T PRK02889 272 DGS 274 (427)
T ss_pred CCC
Confidence 443
No 365
>KOG1354|consensus
Probab=82.93 E-value=7.1 Score=32.62 Aligned_cols=72 Identities=11% Similarity=0.282 Sum_probs=50.9
Q ss_pred CceEEEeee--CCEEEEEeC-CeEEEEeCC-CCc----EEEEEEecCCC---------CCceeEEEEe---CCEEEEEEc
Q psy16020 63 HSVRSLAAV--YNKVWCGYK-NKIHVVDPK-SLV----VLKSFDAHPRR---------ESQVRQMTWA---GDGVWVSIR 122 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~-n~I~vid~~-t~~----i~~~~~~h~~~---------~~~I~~m~~~---~~~vwis~~ 122 (151)
.-|.++.+. ++.|+.|++ ++|.++.-+ +.+ ....|+.|... +..|+.+... +...++-..
T Consensus 26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlst 105 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLST 105 (433)
T ss_pred cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEec
Confidence 556777775 688999995 688888644 333 66778878643 2356666665 334478888
Q ss_pred CCCeEEEEeCCc
Q psy16020 123 LDSTLRMYNAHT 134 (151)
Q Consensus 123 ~d~~l~lwd~~t 134 (151)
+|-+|++|-.+.
T Consensus 106 NdktiKlWKi~e 117 (433)
T KOG1354|consen 106 NDKTIKLWKIRE 117 (433)
T ss_pred CCcceeeeeeec
Confidence 999999999874
No 366
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=82.69 E-value=6.8 Score=22.23 Aligned_cols=27 Identities=11% Similarity=-0.034 Sum_probs=22.3
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEEcC
Q psy16020 17 TALPPVHVQGRVVCALADGSVAIFRRG 43 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~ 43 (151)
.+.++.-.++++|++-.++-|.|++..
T Consensus 3 ~a~~v~v~g~yaYva~~~~Gl~IvDIS 29 (42)
T PF08309_consen 3 DARDVAVSGNYAYVADGNNGLVIVDIS 29 (42)
T ss_pred eEEEEEEECCEEEEEeCCCCEEEEECC
Confidence 456777889999999888889999875
No 367
>KOG1275|consensus
Probab=81.54 E-value=8.1 Score=36.05 Aligned_cols=68 Identities=10% Similarity=0.184 Sum_probs=57.1
Q ss_pred CEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 73 ~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.-+|.|-.+.+..+|..+.+..+....... .|+-|.. .+.++.+++..|+|-|-|..+++...++|.-
T Consensus 149 ~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~---~v~imR~-Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aH 216 (1118)
T KOG1275|consen 149 TLIMGGLQEKLIHIDLNTEKETRTTNVSAS---GVTIMRY-NNRNLFCGDTRGTVFLRDPNSFETIHTFDAH 216 (1118)
T ss_pred ceeecchhhheeeeecccceeeeeeeccCC---ceEEEEe-cCcEEEeecccceEEeecCCcCceeeeeecc
Confidence 347777789999999999999888887643 5888877 4566889999999999999999999999853
No 368
>PHA02790 Kelch-like protein; Provisional
Probab=81.48 E-value=23 Score=30.31 Aligned_cols=111 Identities=12% Similarity=0.038 Sum_probs=60.6
Q ss_pred eeeeCCCceeeeEEeCCeEEEEecC---CcEEEEEcCCCCCCCCCcceEEEeCCCCCce--EEEeeeCCEEEEEeC----
Q psy16020 10 PLNKILDTALPPVHVQGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RSLAAVYNKVWCGYK---- 80 (151)
Q Consensus 10 ~~i~l~~~V~~i~~~~~~v~vgl~n---G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV--~~m~~v~~~Lw~g~~---- 80 (151)
.++.-|-.-.+....++++|+.++. .++-.|+. ..+.|.. +..-..|. .+++..+++||+-.|
T Consensus 303 ~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp-~~n~W~~-------~~~l~~~r~~~~~~~~~g~IYviGG~~~~ 374 (480)
T PHA02790 303 PPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFH-GDAAWVN-------MPSLLKPRCNPAVASINNVIYVIGGHSET 374 (480)
T ss_pred CCCCchhhcceEEEECCEEEEECCcCCCCceEEEEC-CCCeEEE-------CCCCCCCCcccEEEEECCEEEEecCcCCC
Confidence 3333333335566678899987764 23445543 2345632 21111233 245566899997654
Q ss_pred -CeEEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020 81 -NKIHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t 134 (151)
+.+..+|+++.+=...-.. .++ .-.+++..++.+++.++ ....||.++
T Consensus 375 ~~~ve~ydp~~~~W~~~~~m~~~r---~~~~~~~~~~~IYv~GG---~~e~ydp~~ 424 (480)
T PHA02790 375 DTTTEYLLPNHDQWQFGPSTYYPH---YKSCALVFGRRLFLVGR---NAEFYCESS 424 (480)
T ss_pred CccEEEEeCCCCEEEeCCCCCCcc---ccceEEEECCEEEEECC---ceEEecCCC
Confidence 4577888887553221111 111 22355566788887764 467788875
No 369
>PF07494 Reg_prop: Two component regulator propeller; InterPro: IPR011110 A large group of two component regulator proteins appear to have the same N-terminal structure of 14 tandem repeats. These repeats show homology to members of IPR002372 from INTERPRO and IPR001680 from INTERPRO indicating that they are likely to form a beta-propeller. This family has been built with artificially high cut-offs in order to avoid overlaps with other beta-propeller families. The fourteen repeats are likely to form two propellers; it is not clear if these structures are likely to recruit other proteins or interact with DNA.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.
Probab=81.33 E-value=2.4 Score=20.91 Aligned_cols=19 Identities=21% Similarity=0.405 Sum_probs=14.9
Q ss_pred CceEEEeee-CCEEEEEeCC
Q psy16020 63 HSVRSLAAV-YNKVWCGYKN 81 (151)
Q Consensus 63 ~pV~~m~~v-~~~Lw~g~~n 81 (151)
..|+||..- ++.||+|..|
T Consensus 5 n~I~~i~~D~~G~lWigT~~ 24 (24)
T PF07494_consen 5 NNIYSIYEDSDGNLWIGTYN 24 (24)
T ss_dssp SCEEEEEE-TTSCEEEEETS
T ss_pred CeEEEEEEcCCcCEEEEeCC
Confidence 789998885 5889999864
No 370
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=81.31 E-value=26 Score=27.99 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=59.6
Q ss_pred eeeEEeCCeEEEEec-CC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCce--EEEeeeCCEEEEEeC-------CeE
Q psy16020 19 LPPVHVQGRVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RSLAAVYNKVWCGYK-------NKI 83 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~-nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV--~~m~~v~~~Lw~g~~-------n~I 83 (151)
.+....++++|+-.+ ++ .+..|+... ..|+. ....+..-..|. .+++..+++||+..| +.+
T Consensus 66 ~~~~~~~~~lyviGG~~~~~~~~~v~~~d~~~-~~w~~---~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v 141 (323)
T TIGR03548 66 GASVSVENGIYYIGGSNSSERFSSVYRITLDE-SKEEL---ICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKS 141 (323)
T ss_pred eEEEEECCEEEEEcCCCCCCCceeEEEEEEcC-Cceee---eeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceE
Confidence 344555778777543 22 344555432 33421 011233211233 345566899887654 479
Q ss_pred EEEeCCCCcEEEE--EEecCCCCCceeEEEEeCCEEEEEEcCCC----eEEEEeCCccc
Q psy16020 84 HVVDPKSLVVLKS--FDAHPRRESQVRQMTWAGDGVWVSIRLDS----TLRMYNAHTYQ 136 (151)
Q Consensus 84 ~vid~~t~~i~~~--~~~h~~~~~~I~~m~~~~~~vwis~~~d~----~l~lwd~~t~~ 136 (151)
+++|+++.+=.+. +.... ..-..++..++.+++.++.++ .+..||.++.+
T Consensus 142 ~~yd~~~~~W~~~~~~p~~~---r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 142 YLFNLETQEWFELPDFPGEP---RVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred EEEcCCCCCeeECCCCCCCC---CCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence 9999987663321 21111 122344556888888887653 35688887643
No 371
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=80.65 E-value=3.6 Score=21.25 Aligned_cols=25 Identities=20% Similarity=0.159 Sum_probs=22.2
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEE
Q psy16020 17 TALPPVHVQGRVVCALADGSVAIFR 41 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~nG~l~v~~ 41 (151)
.|.+|...++.+.|+.+.+-|.+|+
T Consensus 3 ~i~aia~g~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 3 EIEAIAAGDSWVAVATSAGYLRIFS 27 (27)
T ss_pred eEEEEEccCCEEEEEeCCCeEEecC
Confidence 5788888999999999999999984
No 372
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=80.60 E-value=30 Score=28.28 Aligned_cols=71 Identities=18% Similarity=0.046 Sum_probs=43.6
Q ss_pred CceEEEeee--CCEEEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCC--CeEEEEeC
Q psy16020 63 HSVRSLAAV--YNKVWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLD--STLRMYNA 132 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d--~~l~lwd~ 132 (151)
.++.+.... ++.|+.++ + ..|+++|.++++...... +. ..+..+.++++ .+.++.+.+ ..|++||.
T Consensus 190 ~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~-~~---~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~ 265 (417)
T TIGR02800 190 EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS-FP---GMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDL 265 (417)
T ss_pred CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec-CC---CCccceEECCCCCEEEEEECCCCCccEEEEEC
Confidence 566666665 35565544 2 479999999987654332 32 23445666655 455555544 46999998
Q ss_pred Cccce
Q psy16020 133 HTYQH 137 (151)
Q Consensus 133 ~t~~~ 137 (151)
.+.+.
T Consensus 266 ~~~~~ 270 (417)
T TIGR02800 266 DGKQL 270 (417)
T ss_pred CCCCE
Confidence 87543
No 373
>KOG1900|consensus
Probab=80.27 E-value=5.6 Score=38.16 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=60.1
Q ss_pred eeCC---CceeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEe
Q psy16020 12 NKIL---DTALPPVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVD 87 (151)
Q Consensus 12 i~l~---~~V~~i~~-~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid 87 (151)
++++ ..|.||.| .+|++|.|+.||.|.=+.+.....|-.+-.+.+.++. +-.-.|... ++
T Consensus 172 ~~i~~dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~--s~ls~lvPs-------------~~- 235 (1311)
T KOG1900|consen 172 FKISVDGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTK--SVLSSLVPS-------------LL- 235 (1311)
T ss_pred eeeecCCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCch--hHHHHhhhh-------------hh-
Confidence 5555 48999996 4679999999997665555666678665455555543 111111110 00
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCc
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t 134 (151)
+.+-.+. .+|..|+.+.+ ++..+.++-++++.||..+
T Consensus 236 -------~~~~~~~---dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 236 -------SVPGSSK---DPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred -------cCCCCCC---CcceeeEeccccceeeeeccCceEEEEEccC
Confidence 1111122 37888888744 6678888888888888875
No 374
>KOG1898|consensus
Probab=79.86 E-value=11 Score=35.65 Aligned_cols=102 Identities=15% Similarity=0.196 Sum_probs=64.5
Q ss_pred cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEE
Q psy16020 33 ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTW 112 (151)
Q Consensus 33 ~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~ 112 (151)
++|.+..|+.-.+|. +++..+..+. ..||-.|....+++.+|-|+.++++|.-..+.++..+-.. ....|..+..
T Consensus 910 ~~g~~ytyk~~~~g~-~lellh~T~~---~~~v~Ai~~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~-~p~~Is~iqt 984 (1205)
T KOG1898|consen 910 SSGFVYTYKFVRNGD-KLELLHKTEI---PGPVGAICPFQGRVLAGVGRFLRLYDLGKKKLLRKCELKF-IPNRISSIQT 984 (1205)
T ss_pred CCCceEEEEEEecCc-eeeeeeccCC---CccceEEeccCCEEEEecccEEEEeeCChHHHHhhhhhcc-CceEEEEEee
Confidence 345566666554442 1211111111 2788888888899999999999999998877777655322 2246777777
Q ss_pred eCCEEEEEEcCCCe-EEEEeCCccceee
Q psy16020 113 AGDGVWVSIRLDST-LRMYNAHTYQHLQ 139 (151)
Q Consensus 113 ~~~~vwis~~~d~~-l~lwd~~t~~~l~ 139 (151)
.+..+.++-..++. ...|+-..-+++.
T Consensus 985 ~~~RI~VgD~qeSV~~~~y~~~~n~l~~ 1012 (1205)
T KOG1898|consen 985 YGARIVVGDIQESVHFVRYRREDNQLIV 1012 (1205)
T ss_pred cceEEEEeeccceEEEEEEecCCCeEEE
Confidence 77777777666665 3446665444433
No 375
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=79.73 E-value=7.7 Score=21.01 Aligned_cols=30 Identities=30% Similarity=0.290 Sum_probs=25.5
Q ss_pred EEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 117 VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 117 vwis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
|++. ..++.|.-.|++|++.+-+.+..+.+
T Consensus 3 v~~~-~~~g~l~AlD~~TG~~~W~~~~~~~~ 32 (38)
T PF01011_consen 3 VYVG-TPDGYLYALDAKTGKVLWKFQTGPPV 32 (38)
T ss_dssp EEEE-TTTSEEEEEETTTTSEEEEEESSSGG
T ss_pred EEEe-CCCCEEEEEECCCCCEEEeeeCCCCC
Confidence 4444 89999999999999999999887754
No 376
>KOG3621|consensus
Probab=79.33 E-value=3.2 Score=37.30 Aligned_cols=106 Identities=20% Similarity=0.140 Sum_probs=64.8
Q ss_pred eeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeee--CCEEEEEe-CCeEEEEeCCCCcE
Q psy16020 19 LPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAV--YNKVWCGY-KNKIHVVDPKSLVV 93 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~t~~i 93 (151)
.++.-.+..|-+|.++|.|+||..+..+.-+. ..+.-++ ++..|+|+.-. +.+||.|- .++|...-.++.+
T Consensus 82 ~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~---~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~- 157 (726)
T KOG3621|consen 82 RSVSSVEYLVAAGTASGRVSVFQLNKELPRDL---DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQ- 157 (726)
T ss_pred EEecchhHhhhhhcCCceEEeehhhccCCCcc---eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhh-
Confidence 33444555788999999999999876332111 1222233 24678888875 47899998 4788877776621
Q ss_pred EEEEEec--CCCCCceeEEEEeCCEEEEEEcCCCeEE
Q psy16020 94 LKSFDAH--PRRESQVRQMTWAGDGVWVSIRLDSTLR 128 (151)
Q Consensus 94 ~~~~~~h--~~~~~~I~~m~~~~~~vwis~~~d~~l~ 128 (151)
...+..| ...++.|..+.+...-+++|....+.|.
T Consensus 158 ~~~~~~q~il~~ds~IVQlD~~q~~LLVStl~r~~Lc 194 (726)
T KOG3621|consen 158 AFLSKSQEILSEDSEIVQLDYLQSYLLVSTLTRCILC 194 (726)
T ss_pred hhccccceeeccCcceEEeecccceehHhhhhhhhee
Confidence 1111111 0124578888887777777766655543
No 377
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=79.26 E-value=37 Score=28.62 Aligned_cols=111 Identities=7% Similarity=0.004 Sum_probs=59.5
Q ss_pred CceeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCC-eEEEEeCCCCc
Q psy16020 16 DTALPPVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKN-KIHVVDPKSLV 92 (151)
Q Consensus 16 ~~V~~i~~-~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n-~I~vid~~t~~ 92 (151)
..+..+.. .++.+|++..+|.+.. +++.+..|.......+.......++..+.+. ++++|++..+ .|+.- .+.++
T Consensus 281 ~~l~~v~~~~dg~l~l~g~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s-~D~G~ 358 (398)
T PLN00033 281 RRIQNMGWRADGGLWLLTRGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRS-TDGGK 358 (398)
T ss_pred cceeeeeEcCCCCEEEEeCCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEECCCcEEEe-CCCCc
Confidence 35555544 3556887777787555 3444445632222233333222568888776 4679987754 55444 55566
Q ss_pred EEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEE
Q psy16020 93 VLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLR 128 (151)
Q Consensus 93 i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~ 128 (151)
--+....-.+-......+.+.+ +.-|+++.+.-.||
T Consensus 359 tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~G~il~ 395 (398)
T PLN00033 359 SWKRDKGADNIAANLYSVKFFDDKKGFVLGNDGVLLR 395 (398)
T ss_pred ceeEccccCCCCcceeEEEEcCCCceEEEeCCcEEEE
Confidence 5444332222223577888655 44465555444443
No 378
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=79.18 E-value=15 Score=30.06 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=44.6
Q ss_pred EEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE-EEc-----CCCeEEEEeCC-ccceeeeEe
Q psy16020 75 VWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV-SIR-----LDSTLRMYNAH-TYQHLQDVD 142 (151)
Q Consensus 75 Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~-----~d~~l~lwd~~-t~~~l~~id 142 (151)
+.+|- |....+||..+++..+.+.+-.+ ..---+=+++.+|-|+ +.- ..+.|-+||+. +|+.+.|++
T Consensus 20 vafaRRPG~~~~v~D~~~g~~~~~~~a~~g-RHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~ 95 (305)
T PF07433_consen 20 VAFARRPGTFALVFDCRTGQLLQRLWAPPG-RHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFP 95 (305)
T ss_pred EEEEeCCCcEEEEEEcCCCceeeEEcCCCC-CEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEec
Confidence 55555 45799999999999988775432 1112233455444433 222 26789999999 899999985
No 379
>COG5422 ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
Probab=79.18 E-value=57 Score=30.71 Aligned_cols=122 Identities=7% Similarity=-0.013 Sum_probs=70.5
Q ss_pred eeeeeCCCceeeeEEeCCeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCC---------CCCceEEEeeeCCEEEEE
Q psy16020 9 YPLNKILDTALPPVHVQGRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGL---------PHHSVRSLAAVYNKVWCG 78 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~~~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~---------~~~pV~~m~~v~~~Lw~g 78 (151)
+..+.+|..++++.+.++++.+|.-+| .|+=.+... ....+...+ -.-..++|..++++....
T Consensus 1002 ~~el~v~~E~~sv~Flk~KlcIgC~kgFeIvsle~l~-------~esLL~paD~s~~~~~~ken~kpiai~rv~~eFLLC 1074 (1175)
T COG5422 1002 STELYVPSEPLSVHFLKNKLCIGCKKGFEIVSLENLR-------TESLLNPADTSPLFFEKKENTKPIAIFRVSGEFLLC 1074 (1175)
T ss_pred eEEEEecCceeeeeeeccceEEeecCCceEeechhhh-------hHhhcCcccccHHHHhhcccCceEEEEeeCCcEEEE
Confidence 677889999999999999999999887 333332211 111122222 013335666677754333
Q ss_pred eCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 79 YKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 79 ~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+..-=+.+|.....-..++-.|=+ ..+... +++-. +|-+=+...|.+.|++|+++++.|
T Consensus 1075 ys~faFfVN~~Gwrkrts~i~~We-g~Pq~F-alsyp--YIlaf~~~fIeIr~ieTgeLI~~i 1133 (1175)
T COG5422 1075 YSEFAFFVNDQGWRKRTSWIFHWE-GEPQEF-ALSYP--YILAFEPNFIEIRHIETGELIRCI 1133 (1175)
T ss_pred ecceeEEEcCcCceecccEEEEEc-Ccccee-eeecc--eEEEecCceEEEEecccceeeeee
Confidence 444444555443333333333421 122222 23223 455667889999999999999887
No 380
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=78.86 E-value=58 Score=30.62 Aligned_cols=112 Identities=14% Similarity=0.277 Sum_probs=69.4
Q ss_pred eCCeEEEEecCCcE-EEEEcC---CCC------CCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEE----
Q psy16020 24 VQGRVVCALADGSV-AIFRRG---PDG------QWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVV---- 86 (151)
Q Consensus 24 ~~~~v~vgl~nG~l-~v~~~~---~~~------~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vi---- 86 (151)
..+.+|++++.... .+++.. .++ .|+...| ..+...|.+|.+.. +.|.++. +|.|.++
T Consensus 32 ~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~-----~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~ 106 (928)
T PF04762_consen 32 DSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLP-----DDPNDKIVSFQYLADSESLCIALASGDIILVREDP 106 (928)
T ss_pred CCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCC-----cCCCCcEEEEEeccCCCcEEEEECCceEEEEEccC
Confidence 34578887776555 444443 222 1222222 12236788888863 5699888 4689899
Q ss_pred eCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 87 DPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 87 d~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
|..+.+++-.=.. +..|.+|.+++++= ++-...++.|-+- +++++++.|..+.+
T Consensus 107 ~~~~~~~E~VG~v----d~GI~a~~WSPD~Ella~vT~~~~l~~m-t~~fd~i~E~~l~~ 161 (928)
T PF04762_consen 107 DPDEDEIEIVGSV----DSGILAASWSPDEELLALVTGEGNLLLM-TRDFDPISEVPLDS 161 (928)
T ss_pred CCCCceeEEEEEE----cCcEEEEEECCCcCEEEEEeCCCEEEEE-eccceEEEEeecCc
Confidence 7777666544332 24899999997754 3333345555555 68899999988765
No 381
>KOG3611|consensus
Probab=78.83 E-value=10 Score=34.63 Aligned_cols=61 Identities=10% Similarity=0.074 Sum_probs=40.1
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCC-cceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEEEe
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLS-KYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVVD 87 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~-~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vid 87 (151)
-+|+|+.+|+|.-.=...+..+..+ ...-+++....+||+.|.+.. +.||+|+...|.=+.
T Consensus 427 VlflGTd~G~vlKvV~~~~~~~~~~~llEElqvf~~~~pI~~m~Ls~~~~~LyVgs~~gV~qvp 490 (737)
T KOG3611|consen 427 VLFLGTDAGTVLKVVSPGKESGKSNVLLEELQVFPDAEPIRSMQLSSKRGSLYVGSRSGVVQVP 490 (737)
T ss_pred EEEEecCCCeEEEEEecCCccCccceeEEEEeecCCCCceeEEEecccCCeEEEEccCcEEEee
Confidence 4999999999765532222122222 234567765559999999974 569999987655443
No 382
>KOG2314|consensus
Probab=78.62 E-value=6.6 Score=34.70 Aligned_cols=57 Identities=12% Similarity=0.244 Sum_probs=39.9
Q ss_pred CeEEEEeCCCCcEEEEEEec--CCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020 81 NKIHVVDPKSLVVLKSFDAH--PRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h--~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
.++.|||..||.++++|.+- +-..-++... +-++-++++=....|.+|++.++.++.
T Consensus 282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frW--S~DdKy~Arm~~~sisIyEtpsf~lld 340 (698)
T KOG2314|consen 282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRW--SHDDKYFARMTGNSISIYETPSFMLLD 340 (698)
T ss_pred ceEEEEEccccchhcceeccCCCccccceEEe--ccCCceeEEeccceEEEEecCceeeec
Confidence 47999999999999999983 2223345544 334446666666778888888766653
No 383
>PRK00178 tolB translocation protein TolB; Provisional
Probab=78.27 E-value=38 Score=28.11 Aligned_cols=72 Identities=11% Similarity=0.104 Sum_probs=44.0
Q ss_pred CceEEEeee--CCEEE-EEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCC--CeEEEEeC
Q psy16020 63 HSVRSLAAV--YNKVW-CGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLD--STLRMYNA 132 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw-~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d--~~l~lwd~ 132 (151)
.++...... +++|. ++.. ..|+++|.++++.++-.. .. ..+....++++| +.++.+++ ..|.+||.
T Consensus 199 ~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~-~~---g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~ 274 (430)
T PRK00178 199 EPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITN-FE---GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDL 274 (430)
T ss_pred CceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccC-CC---CCcCCeEECCCCCEEEEEEccCCCceEEEEEC
Confidence 677766665 45664 4433 379999999988654321 11 234456677554 44444444 47899999
Q ss_pred Ccccee
Q psy16020 133 HTYQHL 138 (151)
Q Consensus 133 ~t~~~l 138 (151)
.+.+..
T Consensus 275 ~~~~~~ 280 (430)
T PRK00178 275 ASRQLS 280 (430)
T ss_pred CCCCeE
Confidence 876643
No 384
>KOG1896|consensus
Probab=77.89 E-value=71 Score=31.04 Aligned_cols=83 Identities=17% Similarity=0.037 Sum_probs=59.4
Q ss_pred CCceeeeeeCC--CceeeeEEe-----------CCeEEEEecC---------CcEEEEEcCC----CCCCCCCcceEEEe
Q psy16020 5 HPTPYPLNKIL--DTALPPVHV-----------QGRVVCALAD---------GSVAIFRRGP----DGQWDLSKYHTVTL 58 (151)
Q Consensus 5 ~~~~l~~i~l~--~~V~~i~~~-----------~~~v~vgl~n---------G~l~v~~~~~----~~~wd~~~~~~i~l 58 (151)
+|+.+..|.++ .-|+++++. +.++.||.+. |.+.+|+.-+ .|.-+ ...+.-.+
T Consensus 1013 sw~vi~~iefq~~E~v~~~k~v~L~~~~t~~~~k~ylavGT~~~~gEDv~~RGr~hi~diIeVVPepgkP~-t~~KlKel 1091 (1366)
T KOG1896|consen 1013 SWEVIDKIEFQENEHVLHMKYVILDDEETTKGKKPYLAVGTAFIQGEDVPARGRIHIFDIIEVVPEPGKPF-TKNKLKEL 1091 (1366)
T ss_pred ccccccccccCccceeeEEEEEEEEecccccCCcceEEEEEeecccccccCcccEEEEEEEEecCCCCCCc-ccceeeee
Confidence 66777778777 578888774 3368888765 8899998742 23222 22233333
Q ss_pred C--CCCCceEEEeeeCCEEEEEeCCeEEEEeC
Q psy16020 59 G--LPHHSVRSLAAVYNKVWCGYKNKIHVVDP 88 (151)
Q Consensus 59 ~--~~~~pV~~m~~v~~~Lw~g~~n~I~vid~ 88 (151)
+ .-+.||..+.-+.++|-.|.|-+|+|++.
T Consensus 1092 ~~eE~KGtVsavceV~G~l~~~~GqKI~v~~l 1123 (1366)
T KOG1896|consen 1092 YIEEQKGTVSAVCEVRGHLLSSQGQKIIVRKL 1123 (1366)
T ss_pred ehhhcccceEEEEEeccEEEEccCcEEEEEEe
Confidence 3 24599999999999999999999999998
No 385
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=77.56 E-value=38 Score=27.70 Aligned_cols=84 Identities=19% Similarity=0.192 Sum_probs=59.6
Q ss_pred CCCCCceEEEeeeC-CEEEEEeC---------CeEEEEeCCCCcEEEEEEecC----CCCCceeEEEEeCCE--EEEEEc
Q psy16020 59 GLPHHSVRSLAAVY-NKVWCGYK---------NKIHVVDPKSLVVLKSFDAHP----RRESQVRQMTWAGDG--VWVSIR 122 (151)
Q Consensus 59 ~~~~~pV~~m~~v~-~~Lw~g~~---------n~I~vid~~t~~i~~~~~~h~----~~~~~I~~m~~~~~~--vwis~~ 122 (151)
..++.+||-|+..+ +.+|+|+. .-|..++... ..+-+.+-. .-..+|-++++.+++ +-+|.=
T Consensus 159 ~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsP 236 (305)
T PF07433_consen 159 DLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG--ALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSP 236 (305)
T ss_pred cccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC--cceeccCChHHHHhhCCceEEEEEeCCCCEEEEECC
Confidence 34568999999975 78999983 1255554433 233333321 223589999998664 678999
Q ss_pred CCCeEEEEeCCccceeeeEeCC
Q psy16020 123 LDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 123 ~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+.+.+.+||..|++.+....+.
T Consensus 237 rGg~~~~~d~~tg~~~~~~~l~ 258 (305)
T PF07433_consen 237 RGGRVAVWDAATGRLLGSVPLP 258 (305)
T ss_pred CCCEEEEEECCCCCEeeccccC
Confidence 9999999999999999887654
No 386
>KOG4640|consensus
Probab=76.31 E-value=5.6 Score=35.41 Aligned_cols=44 Identities=9% Similarity=-0.008 Sum_probs=34.9
Q ss_pred CCCCceeeeeeCCC-cee-eeEEe--CCeEEEEecCCcEEEEEcCCCC
Q psy16020 3 YPHPTPYPLNKILD-TAL-PPVHV--QGRVVCALADGSVAIFRRGPDG 46 (151)
Q Consensus 3 ~~~~~~l~~i~l~~-~V~-~i~~~--~~~v~vgl~nG~l~v~~~~~~~ 46 (151)
|..++.+|.+..|+ .+. +++.. ++-+-||++||+|++-+..+++
T Consensus 48 R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 48 RLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred EeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 34589999999994 565 88774 5579999999999999876543
No 387
>KOG1832|consensus
Probab=75.88 E-value=3.9 Score=38.20 Aligned_cols=79 Identities=15% Similarity=0.091 Sum_probs=57.2
Q ss_pred CCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE--EEEEcCC-CeEEEEeCC
Q psy16020 60 LPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV--WVSIRLD-STLRMYNAH 133 (151)
Q Consensus 60 ~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v--wis~~~d-~~l~lwd~~ 133 (151)
+..+.-+|+++.+ ++|.+|. .+.|++||..||+-+....+|.. .|+.+.-+-+|- +.|.+-+ +..-||++.
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~S---avT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQS---AVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCcccccccccccc---ccccccccCCcceeeeeccccCchHHHhccc
Confidence 3448889999974 6799998 57999999999999999999964 888888774443 4333333 356788876
Q ss_pred c-cceeeeE
Q psy16020 134 T-YQHLQDV 141 (151)
Q Consensus 134 t-~~~l~~i 141 (151)
+ +.+...+
T Consensus 1176 s~~~~~Hsf 1184 (1516)
T KOG1832|consen 1176 STGGPRHSF 1184 (1516)
T ss_pred cccCccccc
Confidence 4 4444444
No 388
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=75.58 E-value=25 Score=31.80 Aligned_cols=72 Identities=19% Similarity=0.225 Sum_probs=52.3
Q ss_pred eEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC---CC-CceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020 21 PVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL---PH-HSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLK 95 (151)
Q Consensus 21 i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~---~~-~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~ 95 (151)
++|..|.+|.= .+++|.+|+.. .++..+.+.+.. .. .-+-+|..+ .+++-.+.+|+||.+|..=-.++.
T Consensus 238 f~Y~~G~LY~l-~~~~i~~ysip-----~f~~~~tI~l~~ii~~~~~~~vSl~~~s~nRvLLs~~nkIyLld~~~~siLs 311 (670)
T PF10395_consen 238 FCYQFGKLYQL-SKKTISSYSIP-----NFQIQKTISLPSIIDKESDDLVSLKPPSPNRVLLSVNNKIYLLDLKFESILS 311 (670)
T ss_pred EEEeCCEEEEE-eCCEEEEEEcC-----CceEEEEEEechhhccccccceEeecCCCCeEEEEcCCEEEEEeehhhhhhh
Confidence 46778888876 68899999875 455666777652 11 234566665 599999999999999987666666
Q ss_pred EEE
Q psy16020 96 SFD 98 (151)
Q Consensus 96 ~~~ 98 (151)
+++
T Consensus 312 e~~ 314 (670)
T PF10395_consen 312 EFE 314 (670)
T ss_pred hhh
Confidence 666
No 389
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=75.03 E-value=21 Score=28.50 Aligned_cols=129 Identities=11% Similarity=0.068 Sum_probs=75.5
Q ss_pred CCCCceeeeeeCCCceee-------eEEeC-------CeEEEEecC-CcEEEEEcCCCCCCCCCcc--------eEEEeC
Q psy16020 3 YPHPTPYPLNKILDTALP-------PVHVQ-------GRVVCALAD-GSVAIFRRGPDGQWDLSKY--------HTVTLG 59 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~-------i~~~~-------~~v~vgl~n-G~l~v~~~~~~~~wd~~~~--------~~i~l~ 59 (151)
..+.+.++.+.+|+.+.. |.-.. +++|++=+. +-|.||+...+..|-+... ..+.++
T Consensus 41 l~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~ 120 (287)
T PF03022_consen 41 LKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIG 120 (287)
T ss_dssp TTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEET
T ss_pred CCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccccceecc
Confidence 346678888988865443 33322 478888766 4799999987666633211 222222
Q ss_pred C----CCCceEEEeeeC-----CEEEEEe--CCeEEEEeCCCCcEE------------EEEEecCCCCCceeEEEEeCCE
Q psy16020 60 L----PHHSVRSLAAVY-----NKVWCGY--KNKIHVVDPKSLVVL------------KSFDAHPRRESQVRQMTWAGDG 116 (151)
Q Consensus 60 ~----~~~pV~~m~~v~-----~~Lw~g~--~n~I~vid~~t~~i~------------~~~~~h~~~~~~I~~m~~~~~~ 116 (151)
. ....+..|+... ..||.+. +.++|-+.++-++-. +.+ +.. .++-..|+.+++|
T Consensus 121 g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~~~~~~~~~~~~~~v~~l-G~k--~~~s~g~~~D~~G 197 (287)
T PF03022_consen 121 GESFQWPDGIFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLRDPSLSDAQALASQVQDL-GDK--GSQSDGMAIDPNG 197 (287)
T ss_dssp TEEEEETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHCSTT--HHH-HHHT-EEE-EE-----SECEEEEETTT
T ss_pred CceEecCCCccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhhCccccccccccccceec-ccc--CCCCceEEECCCC
Confidence 2 013366667642 4688775 568988875533211 111 121 1355667777776
Q ss_pred E-EEEEcCCCeEEEEeCCc
Q psy16020 117 V-WVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 117 v-wis~~~d~~l~lwd~~t 134 (151)
+ +++.-..+.|..|++.+
T Consensus 198 ~ly~~~~~~~aI~~w~~~~ 216 (287)
T PF03022_consen 198 NLYFTDVEQNAIGCWDPDG 216 (287)
T ss_dssp EEEEEECCCTEEEEEETTT
T ss_pred cEEEecCCCCeEEEEeCCC
Confidence 6 78999999999999996
No 390
>KOG1897|consensus
Probab=75.02 E-value=78 Score=30.09 Aligned_cols=114 Identities=8% Similarity=0.085 Sum_probs=69.1
Q ss_pred CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeee--CCEEEEEeC
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAV--YNKVWCGYK 80 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v--~~~Lw~g~~ 80 (151)
.+-+.+++.++..+|++|.-.++++.||- |-.|++|++..+ +.+.+. +...|+..+.+. ++++++|-=
T Consensus 818 ~~L~~v~e~~v~Gav~aL~~fngkllA~I-n~~vrLye~t~~--------~eLr~e~~~~~~~~aL~l~v~gdeI~VgDl 888 (1096)
T KOG1897|consen 818 NSLELVAETVVKGAVYALVEFNGKLLAGI-NQSVRLYEWTTE--------RELRIECNISNPIIALDLQVKGDEIAVGDL 888 (1096)
T ss_pred CceeeeeeeeeccceeehhhhCCeEEEec-CcEEEEEEcccc--------ceehhhhcccCCeEEEEEEecCcEEEEeec
Confidence 34567788889999999999999999999 899999998532 222222 223677776663 688888872
Q ss_pred -Ce--EEEEeCCCCcEEEEEE-ecCCCCCceeEEEEeCCEEEEEEcCCCeEEE
Q psy16020 81 -NK--IHVVDPKSLVVLKSFD-AHPRRESQVRQMTWAGDGVWVSIRLDSTLRM 129 (151)
Q Consensus 81 -n~--I~vid~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~vwis~~~d~~l~l 129 (151)
.+ +.-++..-++.+-.-. -+++ =.+..+...+..++-..+++.+.+
T Consensus 889 m~Sitll~y~~~eg~f~evArD~~p~---Wmtaveil~~d~ylgae~~gNlf~ 938 (1096)
T KOG1897|consen 889 MRSITLLQYKGDEGNFEEVARDYNPN---WMTAVEILDDDTYLGAENSGNLFT 938 (1096)
T ss_pred cceEEEEEEeccCCceEEeehhhCcc---ceeeEEEecCceEEeecccccEEE
Confidence 33 3344444433322111 1221 244444445555555555555544
No 391
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=74.00 E-value=53 Score=27.64 Aligned_cols=63 Identities=13% Similarity=0.224 Sum_probs=42.5
Q ss_pred EEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 75 VWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 75 Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+-++.|+.|++++....+. +.. ..++..|+.+++|- ..-...++.+.+....-.+.+-++|+.
T Consensus 194 i~~~~g~~i~~i~~~~~~~---i~~----~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~ 257 (410)
T PF04841_consen 194 ILLANGETIYIIDENSFKQ---IDS----DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD 257 (410)
T ss_pred EEEecCCEEEEEEcccccc---ccC----CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC
Confidence 4444566777776554311 221 24899999997765 444556688888888877788888877
No 392
>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium []. Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding
Probab=72.65 E-value=45 Score=26.27 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=46.3
Q ss_pred CceEEEeee--CCEEEEEe---C---C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCC-----eEE
Q psy16020 63 HSVRSLAAV--YNKVWCGY---K---N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS-----TLR 128 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~---~---n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~-----~l~ 128 (151)
.+-+.+.+. ++=||+-+ + + .|--+|++|+++++++..+-+....=++... -||+.+.+... +-.
T Consensus 121 ~~~t~iD~AvDE~GLWvIYat~~~~g~ivvskld~~tL~v~~tw~T~~~k~~~~naFmv--CGvLY~~~s~~~~~~~I~y 198 (250)
T PF02191_consen 121 SGYTDIDFAVDENGLWVIYATEDNNGNIVVSKLDPETLSVEQTWNTSYPKRSAGNAFMV--CGVLYATDSYDTRDTEIFY 198 (250)
T ss_pred CCCceEEEEEcCCCEEEEEecCCCCCcEEEEeeCcccCceEEEEEeccCchhhcceeeE--eeEEEEEEECCCCCcEEEE
Confidence 444556663 34499876 2 2 3566899999999999876443222232222 46665655543 568
Q ss_pred EEeCCcccee
Q psy16020 129 MYNAHTYQHL 138 (151)
Q Consensus 129 lwd~~t~~~l 138 (151)
.||+.+.+..
T Consensus 199 afDt~t~~~~ 208 (250)
T PF02191_consen 199 AFDTYTGKEE 208 (250)
T ss_pred EEECCCCcee
Confidence 8999986654
No 393
>PLN02153 epithiospecifier protein
Probab=72.38 E-value=49 Score=26.62 Aligned_cols=111 Identities=13% Similarity=0.051 Sum_probs=61.2
Q ss_pred eeeEEeCCeEEEEecC--------CcEEEEEcCCCCCCCCCcceEEEeCCCCCc---eEEEeeeCCEEEEEeC-------
Q psy16020 19 LPPVHVQGRVVCALAD--------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS---VRSLAAVYNKVWCGYK------- 80 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~n--------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~p---V~~m~~v~~~Lw~g~~------- 80 (151)
.+....++++|+..+. ..+.+|+... ..|..-. ..+....+ =.+++.++++||+-.|
T Consensus 26 h~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~-~~W~~~~----~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 100 (341)
T PLN02153 26 HGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNT-HTWSIAP----ANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREF 100 (341)
T ss_pred ceEEEECCEEEEECCccCCCCceeCcEEEEECCC-CEEEEcC----ccCCCCCCccCceEEEEECCEEEEECCCCCCCcc
Confidence 3455667888885432 2466776543 3564221 12211111 1346667889886543
Q ss_pred CeEEEEeCCCCcEEEEEEec-C---CCCCceeEEEEeCCEEEEEEcCC-----------CeEEEEeCCcc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAH-P---RRESQVRQMTWAGDGVWVSIRLD-----------STLRMYNAHTY 135 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h-~---~~~~~I~~m~~~~~~vwis~~~d-----------~~l~lwd~~t~ 135 (151)
+.++++|+++.+-.. +..- . .....-+.++..++.+++.++.+ ..+.+||..+.
T Consensus 101 ~~v~~yd~~t~~W~~-~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~ 169 (341)
T PLN02153 101 SDFYSYDTVKNEWTF-LTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADG 169 (341)
T ss_pred CcEEEEECCCCEEEE-eccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCC
Confidence 469999998765432 2110 0 11123445566678888877754 24778887753
No 394
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=71.95 E-value=43 Score=25.95 Aligned_cols=80 Identities=8% Similarity=0.039 Sum_probs=51.4
Q ss_pred CceeeeeeCC--CceeeeEEe--CCeEEEEecCCcEEEEEcCCCC-------CCCCCcceEEEeCCCCCceEEEeeeCCE
Q psy16020 6 PTPYPLNKIL--DTALPPVHV--QGRVVCALADGSVAIFRRGPDG-------QWDLSKYHTVTLGLPHHSVRSLAAVYNK 74 (151)
Q Consensus 6 ~~~l~~i~l~--~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~-------~wd~~~~~~i~l~~~~~pV~~m~~v~~~ 74 (151)
..+|.-|.+| .+++||.-. .|.+.||. +++|.+|+....- .-|++. ..+.+.. .-..+-|.+.++.
T Consensus 123 ~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~~~~~~~~~lDFe~-~l~~~~~-~~~p~~v~ic~~y 199 (215)
T PF14761_consen 123 KDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQTIQSEKFSFLDFER-SLIDHID-NFKPTQVAICEGY 199 (215)
T ss_pred ccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEEEecccccEEechh-hhhheec-CceEEEEEEEeeE
Confidence 3456666666 699999774 56899999 7799999875211 012211 1112221 2335677888888
Q ss_pred EEEEeCCeEEEEeC
Q psy16020 75 VWCGYKNKIHVVDP 88 (151)
Q Consensus 75 Lw~g~~n~I~vid~ 88 (151)
+.+.+...++|+-.
T Consensus 200 iA~~s~~ev~Vlkl 213 (215)
T PF14761_consen 200 IAVMSDLEVLVLKL 213 (215)
T ss_pred EEEecCCEEEEEEE
Confidence 88888888888754
No 395
>PRK04922 tolB translocation protein TolB; Provisional
Probab=71.59 E-value=59 Score=27.19 Aligned_cols=68 Identities=7% Similarity=-0.059 Sum_probs=39.6
Q ss_pred EEeee--CCEEEEEeC----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEE--EcCC--CeEEEEeCCccc
Q psy16020 67 SLAAV--YNKVWCGYK----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVS--IRLD--STLRMYNAHTYQ 136 (151)
Q Consensus 67 ~m~~v--~~~Lw~g~~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis--~~~d--~~l~lwd~~t~~ 136 (151)
...+. +++|..+++ ..||++|.++++.++- ..+. .......++++|-++. ..++ ..|.+||..+.+
T Consensus 296 ~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~l-t~~g---~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 296 EPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERL-TFQG---NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred ceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-ecCC---CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence 34444 356776663 3699999988876543 2221 1334556675554333 2333 369999998766
Q ss_pred ee
Q psy16020 137 HL 138 (151)
Q Consensus 137 ~l 138 (151)
..
T Consensus 372 ~~ 373 (433)
T PRK04922 372 VR 373 (433)
T ss_pred eE
Confidence 43
No 396
>PLN02193 nitrile-specifier protein
Probab=71.35 E-value=64 Score=27.51 Aligned_cols=113 Identities=13% Similarity=0.092 Sum_probs=62.4
Q ss_pred eeeEEeCCeEEEEecC--------CcEEEEEcCCCCCCCCCcceEEEeCCCCCc---eEEEeeeCCEEEEEeC-------
Q psy16020 19 LPPVHVQGRVVCALAD--------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS---VRSLAAVYNKVWCGYK------- 80 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~n--------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~p---V~~m~~v~~~Lw~g~~------- 80 (151)
.+....++.+|+..+. ..+-+|+... ..|.... ..++...+ -.+++..+++||+-.|
T Consensus 169 h~~~~~~~~iyv~GG~~~~~~~~~~~v~~yD~~~-~~W~~~~----~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ 243 (470)
T PLN02193 169 HGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLET-RTWSISP----ATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQY 243 (470)
T ss_pred cEEEEECCEEEEECCcCCCCCCeeCcEEEEECCC-CEEEeCC----CCCCCCCCcccceEEEEECCEEEEECCCCCCCCC
Confidence 3445567888886652 1355666532 4564211 11221111 1246677899887654
Q ss_pred CeEEEEeCCCCcEEEEEEecC-CCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHP-RRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ 136 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~-~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~ 136 (151)
|.++++|+.+.+-.+--.... .....-++++..++.+++.++.+ ..+..||..+.+
T Consensus 244 ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~ 305 (470)
T PLN02193 244 NGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKK 305 (470)
T ss_pred ccEEEEECCCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCE
Confidence 569999999876433211100 11123456666788888887754 346778876643
No 397
>KOG4441|consensus
Probab=70.70 E-value=76 Score=28.06 Aligned_cols=112 Identities=16% Similarity=0.199 Sum_probs=66.2
Q ss_pred CCceeeeEEeCCeEEEEec-CC------cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------
Q psy16020 15 LDTALPPVHVQGRVVCALA-DG------SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK------- 80 (151)
Q Consensus 15 ~~~V~~i~~~~~~v~vgl~-nG------~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~------- 80 (151)
+..=......++++|+.++ +| ++-.|+.. .+.|....+-. .. ..-..++..++.||+--|
T Consensus 417 ~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~-t~~W~~~~~M~--~~---R~~~g~a~~~~~iYvvGG~~~~~~~ 490 (571)
T KOG4441|consen 417 RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPE-TNTWTLIAPMN--TR---RSGFGVAVLNGKIYVVGGFDGTSAL 490 (571)
T ss_pred ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCC-CCceeecCCcc--cc---cccceEEEECCEEEEECCccCCCcc
Confidence 3344455667889998876 33 35566543 45675443211 11 222347778999997665
Q ss_pred CeEEEEeCCCCcEEEE--EEecCCCCCceeEEEEeCCEEEEEEcCCC-----eEEEEeCCccc
Q psy16020 81 NKIHVVDPKSLVVLKS--FDAHPRRESQVRQMTWAGDGVWVSIRLDS-----TLRMYNAHTYQ 136 (151)
Q Consensus 81 n~I~vid~~t~~i~~~--~~~h~~~~~~I~~m~~~~~~vwis~~~d~-----~l~lwd~~t~~ 136 (151)
.+|..+|+++-+-... +. .. ..-..++..++.+++.++.|+ ++..||..+-+
T Consensus 491 ~~VE~ydp~~~~W~~v~~m~-~~---rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 491 SSVERYDPETNQWTMVAPMT-SP---RSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred ceEEEEcCCCCceeEcccCc-cc---cccccEEEECCEEEEEecccCccccceeEEcCCCCCc
Confidence 2488899998774333 22 22 233444556777788777654 47777777543
No 398
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=70.65 E-value=54 Score=26.31 Aligned_cols=123 Identities=10% Similarity=0.011 Sum_probs=69.5
Q ss_pred CceeeeEEe----CCeEEEEecCCcEEEEEcCC--CCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCC
Q psy16020 16 DTALPPVHV----QGRVVCALADGSVAIFRRGP--DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~----~~~v~vgl~nG~l~v~~~~~--~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~ 89 (151)
-+++.+.+. +..+.+|...+...+++... ...-|...+.... +....|+....+-++++-...++....+|..
T Consensus 152 ~~~~~~~~~~~~~~~~lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~-~~~~~p~~i~~l~~~e~Llc~~~~~v~Vn~~ 230 (302)
T smart00036 152 VPVFVELVSSSFERPGICIGSDKGGGDVVQFHESLVSKEDLSLPFLSE-ETSLKPISVVQVPRDEFLLCYDEFGVFVNLY 230 (302)
T ss_pred ccceEeeecccccceEEEEEEcCCCCeEEEEeeccccccccccccccc-ccccCceEEEEECCCeEEEEECcEEEEEeCC
Confidence 355555543 45899999753333344321 1011221211111 1111466555555678888888877777776
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
.-+..+..+.. -+....++++....++ ... +..|.+++..+.+.+|+|.-
T Consensus 231 G~~~~r~~~l~--w~~~p~~~~~~~pyll-~~~-~~~ievr~l~~~~l~q~i~~ 280 (302)
T smart00036 231 GKRRSRNPILH--WEFMPESFAYHSPYLL-AFH-DNGIEIRSIKTGELLQELAD 280 (302)
T ss_pred CCccccceEEE--cCCcccEEEEECCEEE-EEc-CCcEEEEECCCCceEEEEec
Confidence 32333322222 1235677888877654 443 55599999999999999963
No 399
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=70.33 E-value=58 Score=26.57 Aligned_cols=61 Identities=10% Similarity=0.105 Sum_probs=35.9
Q ss_pred CCEEEEEeC----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCC---eEEEEeCCccc
Q psy16020 72 YNKVWCGYK----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDS---TLRMYNAHTYQ 136 (151)
Q Consensus 72 ~~~Lw~g~~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~---~l~lwd~~t~~ 136 (151)
+++|...+. .+||++|.++++..+ +..+. ..+....++++|-+ +...+++ .|.+||..+.+
T Consensus 289 g~~l~~~s~~~g~~~iy~~d~~~~~~~~-l~~~~---~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 289 GKSIAFTSDRGGSPQIYMMDADGGEVRR-LTFRG---GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG 357 (417)
T ss_pred CCEEEEEECCCCCceEEEEECCCCCEEE-eecCC---CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence 355654442 379999999888643 33232 24555666655432 2333333 78999988743
No 400
>PRK02889 tolB translocation protein TolB; Provisional
Probab=69.70 E-value=66 Score=26.93 Aligned_cols=63 Identities=13% Similarity=-0.007 Sum_probs=35.7
Q ss_pred CCEEEEEeC----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEE--cCC--CeEEEEeCCcccee
Q psy16020 72 YNKVWCGYK----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSI--RLD--STLRMYNAHTYQHL 138 (151)
Q Consensus 72 ~~~Lw~g~~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~--~~d--~~l~lwd~~t~~~l 138 (151)
+.+|...++ ..||++|..+++.++-.. +. .......++++|-|+.. ..+ ..|.+||..+.+..
T Consensus 295 G~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~-~g---~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~ 365 (427)
T PRK02889 295 GRSIYFTSDRGGAPQIYRMPASGGAAQRVTF-TG---SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT 365 (427)
T ss_pred CCEEEEEecCCCCcEEEEEECCCCceEEEec-CC---CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE
Confidence 356665552 279999988877544321 11 12233456655544432 222 36999998876543
No 401
>KOG1898|consensus
Probab=69.49 E-value=22 Score=33.74 Aligned_cols=74 Identities=20% Similarity=0.246 Sum_probs=47.1
Q ss_pred eeCCC--ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-------CE-EEEEe-C
Q psy16020 12 NKILD--TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-------NK-VWCGY-K 80 (151)
Q Consensus 12 i~l~~--~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-------~~-Lw~g~-~ 80 (151)
=+.|. +|.+=....+++.+||+||.+.-|.-+..|+-+ +-....++. .-|.||++.. .+ +.+|+ +
T Consensus 534 w~~P~~~~Iv~~avnr~qiVvalSngelvyfe~d~sgql~-E~~er~tl~---~~vac~ai~~~~~g~krsrfla~a~~d 609 (1205)
T KOG1898|consen 534 WKTPERVRIVKCAVNRRQIVVALSNGELVYFEGDVSGQLN-EFTERVTLS---TDVACLAIGQDPEGEKRSRFLALASVD 609 (1205)
T ss_pred ccCCCceEEEEEeecceEEEEEccCCeEEEEEeccCccce-eeeeeeeec---eeehhhccCCCCcchhhcceeeeeccc
Confidence 34564 444445567789999999999999887555421 222334443 6788888863 23 77787 4
Q ss_pred CeEEEEeCC
Q psy16020 81 NKIHVVDPK 89 (151)
Q Consensus 81 n~I~vid~~ 89 (151)
|+++++...
T Consensus 610 ~~vriisL~ 618 (1205)
T KOG1898|consen 610 NMVRIISLD 618 (1205)
T ss_pred cceeEEEec
Confidence 665555443
No 402
>KOG4532|consensus
Probab=68.97 E-value=58 Score=26.52 Aligned_cols=82 Identities=15% Similarity=0.180 Sum_probs=53.4
Q ss_pred CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEe---CCCCCceEEEeee-C---CEEEEEeC-CeEEE
Q psy16020 16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAV-Y---NKVWCGYK-NKIHV 85 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l---~~~~~pV~~m~~v-~---~~Lw~g~~-n~I~v 85 (151)
|.=++-.+.++ +.-||..||+++||+....+. |....- .+++..+|..-+. . +-|...-+ ..++|
T Consensus 204 D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~t-----pm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv 278 (344)
T KOG4532|consen 204 DHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMAT-----PMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHV 278 (344)
T ss_pred CCceeeeeccCcceEEEEecCCcEEEEEeccccc-----chhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEE
Confidence 34444444333 466788999999999875443 221111 1245888888876 2 55666665 68999
Q ss_pred EeCCCCcEEEEEEecCC
Q psy16020 86 VDPKSLVVLKSFDAHPR 102 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~ 102 (151)
.|+++++-.+.+-...+
T Consensus 279 ~D~R~~~~~q~I~i~~d 295 (344)
T KOG4532|consen 279 VDTRNYVNHQVIVIPDD 295 (344)
T ss_pred EEcccCceeeEEecCcc
Confidence 99999987666665544
No 403
>PRK01029 tolB translocation protein TolB; Provisional
Probab=68.93 E-value=70 Score=26.96 Aligned_cols=63 Identities=19% Similarity=0.088 Sum_probs=38.4
Q ss_pred CCEEEEEeC----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEc--CCCeEEEEeCCcccee
Q psy16020 72 YNKVWCGYK----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIR--LDSTLRMYNAHTYQHL 138 (151)
Q Consensus 72 ~~~Lw~g~~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~--~d~~l~lwd~~t~~~l 138 (151)
++.|..... .+|+++|+++++..+-.. .. ..+....++++| +.++.. ....|.++|..+.+..
T Consensus 338 G~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~-~~---~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~ 408 (428)
T PRK01029 338 GKKIAFCSVIKGVRQICVYDLATGRDYQLTT-SP---ENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTR 408 (428)
T ss_pred CCEEEEEEcCCCCcEEEEEECCCCCeEEccC-CC---CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 455654432 379999999998754332 21 245566777665 333333 3467999998876543
No 404
>KOG2444|consensus
Probab=68.79 E-value=13 Score=29.24 Aligned_cols=67 Identities=15% Similarity=0.037 Sum_probs=45.8
Q ss_pred CCEEEEEeC-CeEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 72 YNKVWCGYK-NKIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 72 ~~~Lw~g~~-n~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+..|.||.. +.|++|+.. -++....+.. ...+|-+|...+.. .-.....|+.+|.|++.-++.+.-+
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s---~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~ 140 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCS---GEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV 140 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhc---ccccceeccccccccceeEEeccCCceeeeccccCceeeee
Confidence 578999986 689999886 1222222221 23478888877665 5557888999999999876666544
No 405
>PF13970 DUF4221: Domain of unknown function (DUF4221); PDB: 3S9J_A.
Probab=68.28 E-value=16 Score=29.52 Aligned_cols=64 Identities=16% Similarity=0.166 Sum_probs=40.4
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCC---ceeEEEEeCCEEEEEEc-CCCeEEEEeCCccceeeeEeCCc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRES---QVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~---~I~~m~~~~~~vwis~~-~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
+.|.++|.+++++++++.-+..+.. .+.......+.+|+..+ ..+.|.+.|.+ ++.++++++.+
T Consensus 67 ~~i~~~Dl~~~~l~~~i~~ekeGpngi~~~~~~~~~~Dsi~l~~~~~~~~l~~~n~~-G~~~~~~~~~~ 134 (333)
T PF13970_consen 67 HSIDIYDLDSGKLVKKIPFEKEGPNGIGRPFGFFQNLDSIFLFNSYAFPKLFLFNSQ-GEVLKKIDLEE 134 (333)
T ss_dssp -EEEEEETTTTEEEEEEE-BSSSTTB-TT---EEESSSTTSEEEEGGGTEEEEE-TT---EEEEEE---
T ss_pred ceEEEEECCCCceeeeeeeeeECCCCccccccceEcCCceEEEecCCcceEEEEcCC-CeEEEEEeccc
Confidence 5799999999999999887764332 33333355666677765 67889999965 89999888765
No 406
>KOG0309|consensus
Probab=68.11 E-value=5.9 Score=36.23 Aligned_cols=60 Identities=20% Similarity=0.211 Sum_probs=43.2
Q ss_pred CCEEEEEe-CCeEEEEeCCC-CcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc
Q psy16020 72 YNKVWCGY-KNKIHVVDPKS-LVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 72 ~~~Lw~g~-~n~I~vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t 134 (151)
+..+-+.+ |+.|+|||..- .....++.+|.. .|+.+.+.. .+-.++.+.|++|+.||-+.
T Consensus 170 ~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs---~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k 233 (1081)
T KOG0309|consen 170 DPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVS---SVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK 233 (1081)
T ss_pred CcchhhhccCCceEEEeccCCCcceEEecccce---eeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence 44444555 67899999884 558888888864 666665542 23355999999999999874
No 407
>PRK13684 Ycf48-like protein; Provisional
Probab=67.24 E-value=67 Score=26.12 Aligned_cols=111 Identities=11% Similarity=0.058 Sum_probs=57.4
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEE-cCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC-CeEEEEeCCCC
Q psy16020 16 DTALPPVHV-QGRVVCALADGSVAIFR-RGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKSL 91 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~-~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~-n~I~vid~~t~ 91 (151)
.++.++.+. ++++++...+|.+. ++ .+.+..|.... .+.......+..+.+. ++++|++.. +.|+ ...+.+
T Consensus 215 ~~l~~i~~~~~g~~~~vg~~G~~~-~~s~d~G~sW~~~~---~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~-~S~d~G 289 (334)
T PRK13684 215 RRLQSMGFQPDGNLWMLARGGQIR-FNDPDDLESWSKPI---IPEITNGYGYLDLAYRTPGEIWAGGGNGTLL-VSKDGG 289 (334)
T ss_pred ccceeeeEcCCCCEEEEecCCEEE-EccCCCCCcccccc---CCccccccceeeEEEcCCCCEEEEcCCCeEE-EeCCCC
Confidence 467777664 45666666677654 53 45555785211 0101111456777776 467898765 4444 444555
Q ss_pred cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEe
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYN 131 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd 131 (151)
+.-+.....+........+.+..++..+..+..+.|--|+
T Consensus 290 ~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~il~~~ 329 (334)
T PRK13684 290 KTWEKDPVGEEVPSNFYKIVFLDPEKGFVLGQRGVLLRYV 329 (334)
T ss_pred CCCeECCcCCCCCcceEEEEEeCCCceEEECCCceEEEec
Confidence 5444433222112356777766444433455555555444
No 408
>KOG4499|consensus
Probab=66.47 E-value=33 Score=27.42 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=29.6
Q ss_pred EEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 109 QMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 109 ~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
-|+.+++| +|+++=+.+++...|..|++.|++|-+-
T Consensus 216 Gm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklP 252 (310)
T KOG4499|consen 216 GMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLP 252 (310)
T ss_pred cceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcC
Confidence 34455454 4999999999999999999999999653
No 409
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=66.31 E-value=54 Score=28.69 Aligned_cols=43 Identities=12% Similarity=0.254 Sum_probs=33.8
Q ss_pred CCEEEEEeCCeEEEEeC---CCCcEEEEEEecCCCCCceeEEEEeCCEEE
Q psy16020 72 YNKVWCGYKNKIHVVDP---KSLVVLKSFDAHPRRESQVRQMTWAGDGVW 118 (151)
Q Consensus 72 ~~~Lw~g~~n~I~vid~---~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw 118 (151)
++.|++..+++|+|+|+ +++++..++..-. .+..|-..++.+.
T Consensus 22 G~yIY~v~~~~l~Iida~p~~~~~~~s~I~~~~----~~~eLyl~gdrLv 67 (521)
T PF09826_consen 22 GEYIYVVSGGRLYIIDAYPAEEMKVVSRIDLDG----SPQELYLDGDRLV 67 (521)
T ss_pred CCEEEEEeCCEEEEEECCCchhceEEEEEecCC----ChhheEEcCCEEE
Confidence 46799999999999999 6888888888553 2777777777653
No 410
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=65.25 E-value=90 Score=27.33 Aligned_cols=30 Identities=13% Similarity=0.136 Sum_probs=27.5
Q ss_pred CceEEEeeeCCEEEEEeCCeEEEEeCCCCc
Q psy16020 63 HSVRSLAAVYNKVWCGYKNKIHVVDPKSLV 92 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~ 92 (151)
.+++..++.++.||.-+++.|.+.|.+|+|
T Consensus 492 ~~~~R~lyi~d~lYtvS~~~i~~~~l~t~~ 521 (521)
T PF09826_consen 492 YQIQRSLYIGDTLYTVSDNGIKAYDLNTLE 521 (521)
T ss_pred cceeEEEEECCEEEEEECCEEEEEehHhcC
Confidence 459999999999999999999999999875
No 411
>KOG1897|consensus
Probab=65.00 E-value=57 Score=30.95 Aligned_cols=52 Identities=27% Similarity=0.383 Sum_probs=33.7
Q ss_pred CCeEEEEecCCcEEEEEcCC-CCCCCCCcceEEEeCCCCCce--EEEeeeC-CEEEEEeC
Q psy16020 25 QGRVVCALADGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSV--RSLAAVY-NKVWCGYK 80 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~-~~~wd~~~~~~i~l~~~~~pV--~~m~~v~-~~Lw~g~~ 80 (151)
.+++++|++||.+.-|-.+. .| .+..++...+|. .|+ |.....+ ..+.|.++
T Consensus 595 ~~yLlvalgdG~l~~fv~d~~tg--~lsd~Kk~~lGt--~P~~Lr~f~sk~~t~vfa~sd 650 (1096)
T KOG1897|consen 595 IHYLLVALGDGALLYFVLDINTG--QLSDRKKVTLGT--QPISLRTFSSKSRTAVFALSD 650 (1096)
T ss_pred ceEEEEEcCCceEEEEEEEcccc--eEccccccccCC--CCcEEEEEeeCCceEEEEeCC
Confidence 45899999999999887653 22 345667778888 555 3433333 33555554
No 412
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=64.98 E-value=30 Score=32.00 Aligned_cols=70 Identities=16% Similarity=0.254 Sum_probs=48.3
Q ss_pred CceEEEeee-------CCEEEEEe-CCeEEEEeCCC-C-cEEEEEEecC-CCCCceeEEEEeCCEEEEEEcCCCeEEEEe
Q psy16020 63 HSVRSLAAV-------YNKVWCGY-KNKIHVVDPKS-L-VVLKSFDAHP-RRESQVRQMTWAGDGVWVSIRLDSTLRMYN 131 (151)
Q Consensus 63 ~pV~~m~~v-------~~~Lw~g~-~n~I~vid~~t-~-~i~~~~~~h~-~~~~~I~~m~~~~~~vwis~~~d~~l~lwd 131 (151)
.||+.++.. +.+.++|- .|.++-||++- + ++... +.|. .....-+|++..++|-.+-++.+|-|||||
T Consensus 526 ~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~-~~k~Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd 604 (794)
T PF08553_consen 526 IPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS-QSKQYSSKNNFSCFATTEDGYIAVGSNKGDIRLYD 604 (794)
T ss_pred cceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeec-cccccccCCCceEEEecCCceEEEEeCCCcEEeec
Confidence 446666553 34678887 57899999983 2 23221 1111 123468899999999999999999999999
Q ss_pred CC
Q psy16020 132 AH 133 (151)
Q Consensus 132 ~~ 133 (151)
..
T Consensus 605 ~~ 606 (794)
T PF08553_consen 605 RL 606 (794)
T ss_pred cc
Confidence 54
No 413
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=64.73 E-value=36 Score=30.64 Aligned_cols=71 Identities=13% Similarity=0.207 Sum_probs=46.1
Q ss_pred CCceeeeEEe---CCe--EEEEecCCcEEEEEcC------CCCCCCCCcceEEEeCCCC-CceEEEeee-CCEEEEEeCC
Q psy16020 15 LDTALPPVHV---QGR--VVCALADGSVAIFRRG------PDGQWDLSKYHTVTLGLPH-HSVRSLAAV-YNKVWCGYKN 81 (151)
Q Consensus 15 ~~~V~~i~~~---~~~--v~vgl~nG~l~v~~~~------~~~~wd~~~~~~i~l~~~~-~pV~~m~~v-~~~Lw~g~~n 81 (151)
.+.|.+|-.. +++ +-||- ...|.+|... ....|. ..+.+.+.+.. +||....-. ++.|.+|+||
T Consensus 72 ~~~I~dLDWtst~d~qsiLaVGf-~~~v~l~~Q~R~dy~~~~p~w~--~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sGN 148 (631)
T PF12234_consen 72 DDPIRDLDWTSTPDGQSILAVGF-PHHVLLYTQLRYDYTNKGPSWA--PIRKIDISSHTPHPIGDSIWLKDGTLVVGSGN 148 (631)
T ss_pred CCceeeceeeecCCCCEEEEEEc-CcEEEEEEccchhhhcCCcccc--eeEEEEeecCCCCCccceeEecCCeEEEEeCC
Confidence 4666666442 223 44444 4567777542 334553 45667776533 888877776 5789999999
Q ss_pred eEEEEeC
Q psy16020 82 KIHVVDP 88 (151)
Q Consensus 82 ~I~vid~ 88 (151)
+++|+|.
T Consensus 149 qlfv~dk 155 (631)
T PF12234_consen 149 QLFVFDK 155 (631)
T ss_pred EEEEECC
Confidence 9999975
No 414
>KOG2079|consensus
Probab=64.68 E-value=16 Score=34.63 Aligned_cols=79 Identities=14% Similarity=0.207 Sum_probs=51.4
Q ss_pred CceEEEee--eCCEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcccee
Q psy16020 63 HSVRSLAA--VYNKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 63 ~pV~~m~~--v~~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l 138 (151)
.|++.... +..-+.+|+ ++.|...|..+- .+.+.-..+...+|++++...+|- .+.+-.+|.|.+||....+.+
T Consensus 88 ~~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~n--L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l 165 (1206)
T KOG2079|consen 88 IAAGVISSAIVVVPIVIGTSHGHVLLSDMTGN--LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKIL 165 (1206)
T ss_pred CCcceeeeeeeeeeEEEEcCchhhhhhhhhcc--cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcce
Confidence 44444333 444444444 467777765432 222222223345799999997776 667778999999999999999
Q ss_pred eeEeC
Q psy16020 139 QDVDI 143 (151)
Q Consensus 139 ~~idi 143 (151)
+.|+.
T Consensus 166 ~~i~e 170 (1206)
T KOG2079|consen 166 KVITE 170 (1206)
T ss_pred eeeee
Confidence 98875
No 415
>KOG0576|consensus
Probab=63.88 E-value=26 Score=32.00 Aligned_cols=127 Identities=10% Similarity=0.120 Sum_probs=78.1
Q ss_pred eeeeeeCCCceeeeEEeCC----eEEEEecCC-----cEEEEEcC---CCCCCCCCcceEEEeCCCCCceEEEeeeC-CE
Q psy16020 8 PYPLNKILDTALPPVHVQG----RVVCALADG-----SVAIFRRG---PDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NK 74 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~~~~----~v~vgl~nG-----~l~v~~~~---~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~ 74 (151)
+.+.++-|.+++.+.-..+ +|.+|-+-| ...+|+.. ++..|+.. ..+..-||.-+..++ +.
T Consensus 647 i~~pl~~p~~~f~~l~~~~~e~p~vc~Gv~~~~~~~~~~v~f~~~~~~~~~~w~~~------~~~~~~~v~~v~qvdrd~ 720 (829)
T KOG0576|consen 647 ISFPLPSPLSVFEMLVLPESEYPQVCVGVSAGGGTLNNEVLFHTAFLNSDSSWDIE------AAGETLPVPQVTQVDRDT 720 (829)
T ss_pred cccCCCCccchhhhccccCcccceeeeeccCCCCCCCceeEEEeccccccccccee------ccCcccCCceeEEecccc
Confidence 3445555667777765544 466665432 46677553 34566543 244457788888887 77
Q ss_pred EEEEeCCeEEEEeCCC-CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 75 VWCGYKNKIHVVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 75 Lw~g~~n~I~vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.+..+|.|.+.+.+. +++.+....-=.++..|..+++.++.|...-.. -++-|...+.+..|+|.
T Consensus 721 I~v~~~n~V~~v~lqG~~~~~~~~~sel~f~f~iesv~~~~gsvlaf~~h--gvqgr~l~S~~vtqei~ 787 (829)
T KOG0576|consen 721 ILVLFENMVKIVNLQGNGKVAVKLLSELTFDFDIESVVCLQGSVLAFWKH--GVQGRSLTSNEVTQEIQ 787 (829)
T ss_pred eEeeecCeeEEEeccCCccccccccccccccCCcceEEeeCCceecccCC--cceeeeccchHHHHHHH
Confidence 9999999999999883 454444321111234677777777776544333 35566677777777764
No 416
>KOG1008|consensus
Probab=63.84 E-value=1.9 Score=38.49 Aligned_cols=105 Identities=14% Similarity=0.214 Sum_probs=64.5
Q ss_pred EEEEecCCcEEEEEcCC--CCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-----CeEEEEeCCCC--cEEE
Q psy16020 28 VVCALADGSVAIFRRGP--DGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-----NKIHVVDPKSL--VVLK 95 (151)
Q Consensus 28 v~vgl~nG~l~v~~~~~--~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-----n~I~vid~~t~--~i~~ 95 (151)
+=+|+++|.|.+-.... +..|.+ ....+.|++|++.++ +.|.+|-+ ..+.+||..++ -.+.
T Consensus 73 lavG~atG~I~l~s~r~~hdSs~E~-------tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke 145 (783)
T KOG1008|consen 73 LAVGSATGNISLLSVRHPHDSSAEV-------TPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKE 145 (783)
T ss_pred hhhccccCceEEeecCCccccccee-------cccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcc
Confidence 67899999988876542 222322 112248999999986 45777763 35999999987 2222
Q ss_pred --EEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCC-ccceeeeE
Q psy16020 96 --SFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAH-TYQHLQDV 141 (151)
Q Consensus 96 --~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~-t~~~l~~i 141 (151)
.|.+..-. ..+.+... .....+++..+..+.++|.+ +....+++
T Consensus 146 ~~~fs~~~l~--gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv 193 (783)
T KOG1008|consen 146 SPLFSSSTLD--GQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV 193 (783)
T ss_pred cccccccccc--CccccccccCcchhhcccccchhhhhhhhhhhhhhhhh
Confidence 23332221 22233333 34557788888899999998 44444444
No 417
>KOG4532|consensus
Probab=63.71 E-value=80 Score=25.75 Aligned_cols=106 Identities=12% Similarity=0.139 Sum_probs=61.8
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe-C--Ce--EEEEeCCCCcEEEEEEecC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY-K--NK--IHVVDPKSLVVLKSFDAHP 101 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~-~--n~--I~vid~~t~~i~~~~~~h~ 101 (151)
.++++.-|-++-+|....+. . ...+..++-.+.++.+.++-=|-+| | ++ .|-||-++-.+++..++.+
T Consensus 130 ~~~i~sndht~k~~~~~~~s-----~--~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t 202 (344)
T KOG4532|consen 130 PLNIASNDHTGKTMVVSGDS-----N--KFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPT 202 (344)
T ss_pred ceeeccCCcceeEEEEecCc-----c--cceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEeccc
Confidence 36666656566555543111 1 0112222233666777665556665 3 44 5666777888999666654
Q ss_pred CCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020 102 RRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHT-YQHLQDV 141 (151)
Q Consensus 102 ~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t-~~~l~~i 141 (151)
.. .=++..++ .+-.+..+..|+++.+||++. ..+..++
T Consensus 203 ~D--~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~ 242 (344)
T KOG4532|consen 203 SD--HGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI 242 (344)
T ss_pred CC--CceeeeeccCcceEEEEecCCcEEEEEecccccchhhh
Confidence 32 33444444 344488999999999999996 4444444
No 418
>PRK00178 tolB translocation protein TolB; Provisional
Probab=63.40 E-value=86 Score=25.98 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=36.5
Q ss_pred CCEEEEEe---CC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCC--CeEEEEeCCccce
Q psy16020 72 YNKVWCGY---KN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLD--STLRMYNAHTYQH 137 (151)
Q Consensus 72 ~~~Lw~g~---~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d--~~l~lwd~~t~~~ 137 (151)
+++|.... ++ .||++|+++++..+ +..+.. ......++++ .+..+..++ ..|.++|..+++.
T Consensus 254 G~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~---~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~ 323 (430)
T PRK00178 254 GSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPA---IDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA 323 (430)
T ss_pred CCEEEEEEccCCCceEEEEECCCCCeEE-cccCCC---CcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 45676554 22 79999999988654 443321 3334455544 444444443 4688888877653
No 419
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=63.10 E-value=64 Score=26.86 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=27.0
Q ss_pred eeeCCCceeeeEEeCCeEEEEecC--CcEEEEEcCC
Q psy16020 11 LNKILDTALPPVHVQGRVVCALAD--GSVAIFRRGP 44 (151)
Q Consensus 11 ~i~l~~~V~~i~~~~~~v~vgl~n--G~l~v~~~~~ 44 (151)
++.=.+.|++..|-..-.|+|.+| |.+..|.|..
T Consensus 22 ~~tead~ItaVefd~tg~YlatGDkgGRVvlfer~~ 57 (460)
T COG5170 22 SSTEADKITAVEFDETGLYLATGDKGGRVVLFEREK 57 (460)
T ss_pred cccccceeeEEEeccccceEeecCCCceEEEeeccc
Confidence 344457788888877669999999 9999999974
No 420
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=62.89 E-value=82 Score=25.58 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=44.5
Q ss_pred CCEEEEEe--CCeEEEEeCC--CCcEEEE--EEecCCCCCceeEEEEeCCE-EEEEEcCC-CeEEEEeCCccceeeeEeC
Q psy16020 72 YNKVWCGY--KNKIHVVDPK--SLVVLKS--FDAHPRRESQVRQMTWAGDG-VWVSIRLD-STLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 72 ~~~Lw~g~--~n~I~vid~~--t~~i~~~--~~~h~~~~~~I~~m~~~~~~-vwis~~~d-~~l~lwd~~t~~~l~~idi 143 (151)
++.||.+- .++|+.++.. ++.+-.+ +..........--|+.+.+| +|++...+ +-|..|+.. ++++++|.+
T Consensus 174 g~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~l 252 (307)
T COG3386 174 GKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKL 252 (307)
T ss_pred CCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEEC
Confidence 45788886 3788888765 3333222 22121122345556666554 48544444 499999999 999999965
Q ss_pred C
Q psy16020 144 E 144 (151)
Q Consensus 144 ~ 144 (151)
=
T Consensus 253 P 253 (307)
T COG3386 253 P 253 (307)
T ss_pred C
Confidence 4
No 421
>KOG2063|consensus
Probab=62.85 E-value=93 Score=29.22 Aligned_cols=121 Identities=11% Similarity=0.017 Sum_probs=67.1
Q ss_pred eeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCCCceEEEeeeCCEEEEEeCCeEEEE
Q psy16020 10 PLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPHHSVRSLAAVYNKVWCGYKNKIHVV 86 (151)
Q Consensus 10 ~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~~pV~~m~~v~~~Lw~g~~n~I~vi 86 (151)
..+.+|+.+..+.+.+..+.+|. ++...+......|. .+..+..+ ....|+-+...-+.+|-.|-||...+.
T Consensus 152 ~~~~~~~~p~~~~~~~~~~c~~~-~~~~~ii~~~~~~~----~~~~~~s~~~~~s~~P~I~~l~~~~~ll~~kd~~gv~v 226 (877)
T KOG2063|consen 152 KELGFPDVPKARAWCGHIVCLGL-KKSYYIINNTSKGV----GPNLFPSSMDNESRKPLIKSLSDQSELLLGKDNIGVVV 226 (877)
T ss_pred EecccccchhhhcccceeEEEee-cceeEEEecCCCcc----ccceeeeccccccCCCeEEEecCCceEEEccCceEEEE
Confidence 44556666666666666677777 54555555443331 11111112 112565443333447888888988888
Q ss_pred eCCCCcEEEE-EEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 87 DPKSLVVLKS-FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 87 d~~t~~i~~~-~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|...-...+. +. -++ ....+.+.... .|+.... .+.+|...+++++|.|
T Consensus 227 d~~G~~~~~~~l~-ws~---~P~~v~~~~PY-lIa~~~~-~veI~s~~~~qlvQSI 276 (877)
T KOG2063|consen 227 DLNGIIAQRGTLV-WSE---VPLSVVVESPY-LIALLDR-SVEIRSKLDGQLVQSI 276 (877)
T ss_pred ecCCcccCCCceE-ecc---cchhhcccCce-EEEEccc-cEEEEeccCHHHhhcc
Confidence 8543331222 22 111 33334443333 3444444 9999999999999999
No 422
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=62.71 E-value=88 Score=25.90 Aligned_cols=75 Identities=15% Similarity=0.190 Sum_probs=52.6
Q ss_pred eCCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcC---C----------------CeEEE
Q psy16020 71 VYNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRL---D----------------STLRM 129 (151)
Q Consensus 71 v~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~---d----------------~~l~l 129 (151)
.+++||+... +.|+.+|+++|+.+...+.- ....-|.+.|+-..++.+. + +=|.+
T Consensus 211 hdgrLwvldsgtGev~~vD~~~G~~e~Va~vp----G~~rGL~f~G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~v 286 (335)
T TIGR03032 211 YQGKLWLLNSGRGELGYVDPQAGKFQPVAFLP----GFTRGLAFAGDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAV 286 (335)
T ss_pred eCCeEEEEECCCCEEEEEcCCCCcEEEEEECC----CCCcccceeCCEEEEEeccccCCCCcCCCchhhhhhhhcccEEE
Confidence 3689998873 68999999999876664422 2455555666665666554 1 33778
Q ss_pred EeCCccceeeeEeCCccccc
Q psy16020 130 YNAHTYQHLQDVDIEPYVSK 149 (151)
Q Consensus 130 wd~~t~~~l~~idi~~~v~~ 149 (151)
-|.+|++.+.-+.++..|..
T Consensus 287 idl~tG~vv~~l~feg~v~E 306 (335)
T TIGR03032 287 IDLNSGDVVHWLRFEGVIEE 306 (335)
T ss_pred EECCCCCEEEEEEeCCceeE
Confidence 89999998888888776654
No 423
>PRK04792 tolB translocation protein TolB; Provisional
Probab=62.59 E-value=95 Score=26.26 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=36.1
Q ss_pred CCEEEEE-eC--C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEE--EEEcC--CCeEEEEeCCccce
Q psy16020 72 YNKVWCG-YK--N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW--VSIRL--DSTLRMYNAHTYQH 137 (151)
Q Consensus 72 ~~~Lw~g-~~--n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw--is~~~--d~~l~lwd~~t~~~ 137 (151)
+++|+.. .. + .||++|.++++..+ +..+.. ......++++|-+ ++..+ ...|.++|..+.+.
T Consensus 273 G~~La~~~~~~g~~~Iy~~dl~tg~~~~-lt~~~~---~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~ 342 (448)
T PRK04792 273 GKKLALVLSKDGQPEIYVVDIATKALTR-ITRHRA---IDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV 342 (448)
T ss_pred CCEEEEEEeCCCCeEEEEEECCCCCeEE-CccCCC---CccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 4567654 32 2 69999999988654 333321 3445566655443 33333 34677778876653
No 424
>KOG2315|consensus
Probab=62.04 E-value=79 Score=27.96 Aligned_cols=85 Identities=8% Similarity=0.081 Sum_probs=54.6
Q ss_pred EEEeCCCCCceEEEeeeC--CEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE--EE-EEcC-CC
Q psy16020 55 TVTLGLPHHSVRSLAAVY--NKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV--WV-SIRL-DS 125 (151)
Q Consensus 55 ~i~l~~~~~pV~~m~~v~--~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v--wi-s~~~-d~ 125 (151)
.++|.. ..||.+..-.. .+..+-+| -++-++|.+ +++...|.- .+=++|-+++.|- .+ -+++ .+
T Consensus 264 ~V~L~k-~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e-----gpRN~~~fnp~g~ii~lAGFGNL~G 336 (566)
T KOG2315|consen 264 SVPLLK-EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE-----GPRNTAFFNPHGNIILLAGFGNLPG 336 (566)
T ss_pred EEecCC-CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCCC-----CCccceEECCCCCEEEEeecCCCCC
Confidence 344432 49999998863 34444445 479999875 444444432 3446666664432 22 2233 78
Q ss_pred eEEEEeCCccceeeeEeCCcc
Q psy16020 126 TLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 126 ~l~lwd~~t~~~l~~idi~~~ 146 (151)
.+.+||+.+++++..++.+..
T Consensus 337 ~mEvwDv~n~K~i~~~~a~~t 357 (566)
T KOG2315|consen 337 DMEVWDVPNRKLIAKFKAANT 357 (566)
T ss_pred ceEEEeccchhhccccccCCc
Confidence 899999999999999987654
No 425
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=61.47 E-value=13 Score=30.34 Aligned_cols=55 Identities=16% Similarity=0.253 Sum_probs=43.4
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020 80 KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 80 ~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l 138 (151)
.+.++++|.+++++..-... ...+.....+++|-+++.-+++-|.+++..+.+..
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~----~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~ 76 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP----PPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQET 76 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E----ETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEE
T ss_pred ceeEEEEecCCCceEECcCC----ccccccceeecCCCeeEEEecCceEEEECCCCCeE
Confidence 35799999999887766554 24788889999999999999999999998776433
No 426
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=60.95 E-value=23 Score=28.54 Aligned_cols=39 Identities=13% Similarity=0.301 Sum_probs=33.5
Q ss_pred CCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 103 RESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 103 ~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
....|..|..+++|- +++.+-++.|.||+.-++++.++-
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W 267 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW 267 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence 456899999998876 899999999999999988877654
No 427
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=60.11 E-value=89 Score=25.10 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=46.3
Q ss_pred CCCceeeeEEe-CCeEEEEec-------CCcEEEEEcCCCCCCCCCcceEEEeC---CCCCceEEEeee---CCEEEEEe
Q psy16020 14 ILDTALPPVHV-QGRVVCALA-------DGSVAIFRRGPDGQWDLSKYHTVTLG---LPHHSVRSLAAV---YNKVWCGY 79 (151)
Q Consensus 14 l~~~V~~i~~~-~~~v~vgl~-------nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~~pV~~m~~v---~~~Lw~g~ 79 (151)
+...|.+|.+. +++|++|.. ...++.|+.+. ..|+. +.-+ .-..||..+.+. .+++|++-
T Consensus 35 i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~-~~w~~-----~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG 108 (281)
T PF12768_consen 35 ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKN-QTWSS-----LGGGSSNSIPGPVTALTFISNDGSNFWVAG 108 (281)
T ss_pred ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCC-Ceeee-----cCCcccccCCCcEEEEEeeccCCceEEEec
Confidence 56789999986 778999873 23577777643 45632 1111 113789888885 36799543
Q ss_pred -----CCeEEEEeCCCCc
Q psy16020 80 -----KNKIHVVDPKSLV 92 (151)
Q Consensus 80 -----~n~I~vid~~t~~ 92 (151)
...|..||-.+.+
T Consensus 109 ~~~~g~~~l~~~dGs~W~ 126 (281)
T PF12768_consen 109 RSANGSTFLMKYDGSSWS 126 (281)
T ss_pred eecCCCceEEEEcCCceE
Confidence 2358888755444
No 428
>KOG0882|consensus
Probab=58.65 E-value=1.3e+02 Score=26.35 Aligned_cols=113 Identities=19% Similarity=0.179 Sum_probs=70.6
Q ss_pred CCeEEEEecC--CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe--CCeEEEEeCCCCc--EEE
Q psy16020 25 QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY--KNKIHVVDPKSLV--VLK 95 (151)
Q Consensus 25 ~~~v~vgl~n--G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~--~n~I~vid~~t~~--i~~ 95 (151)
++.++..-++ -.+.+|+.. |++-+..+++...+.-+.+..--+ ..|.++. .+.|+|+|....- ...
T Consensus 64 dg~L~~Sv~d~Dhs~KvfDvE-----n~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~ 138 (558)
T KOG0882|consen 64 DGWLFRSVEDPDHSVKVFDVE-----NFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGY 138 (558)
T ss_pred cceeEeeccCcccceeEEEee-----ccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccce
Confidence 4567776444 568888775 555556677776323333333333 2455555 3689999987433 333
Q ss_pred EEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC-ccceeee-EeCCc
Q psy16020 96 SFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH-TYQHLQD-VDIEP 145 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~-t~~~l~~-idi~~ 145 (151)
.-.-|. ++|..|.+...+= -+|...++.|.-|-+. .++.... ++++.
T Consensus 139 fkklH~---sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~ 188 (558)
T KOG0882|consen 139 FKKLHF---SPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFEL 188 (558)
T ss_pred eccccc---CceEEEEeeccccceeeccccceeEeecCCCcccCccccccccc
Confidence 333465 4899998874432 7799999999999998 4554443 55443
No 429
>PRK13684 Ycf48-like protein; Provisional
Probab=58.37 E-value=1e+02 Score=25.11 Aligned_cols=107 Identities=10% Similarity=0.080 Sum_probs=54.8
Q ss_pred CceeeeEEeCCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe-CCeEEEEeCCCCc
Q psy16020 16 DTALPPVHVQGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY-KNKIHVVDPKSLV 92 (151)
Q Consensus 16 ~~V~~i~~~~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~-~n~I~vid~~t~~ 92 (151)
.++.++...++. +++...+|.+..-..+.+.+|. .+..+. ..++++|.+. ++++|+.. ++.++.-..+.++
T Consensus 173 g~~~~i~~~~~g~~v~~g~~G~i~~s~~~gg~tW~-----~~~~~~-~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~ 246 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVSSRGNFYSTWEPGQTAWT-----PHQRNS-SRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLE 246 (334)
T ss_pred ceEEEEEECCCCeEEEEeCCceEEEEcCCCCCeEE-----EeeCCC-cccceeeeEcCCCCEEEEecCCEEEEccCCCCC
Confidence 467777765554 3333446755443222222463 223332 3889999886 46777655 4555432455555
Q ss_pred EEEEEEecCC-CCCceeEEEEeCC-EEEEEEcCCCeEE
Q psy16020 93 VLKSFDAHPR-RESQVRQMTWAGD-GVWVSIRLDSTLR 128 (151)
Q Consensus 93 i~~~~~~h~~-~~~~I~~m~~~~~-~vwis~~~d~~l~ 128 (151)
.-+....... ....+..+.+.++ .+|+.+.....++
T Consensus 247 sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~~ 284 (334)
T PRK13684 247 SWSKPIIPEITNGYGYLDLAYRTPGEIWAGGGNGTLLV 284 (334)
T ss_pred ccccccCCccccccceeeEEEcCCCCEEEEcCCCeEEE
Confidence 4443322211 1235777777655 4565555444444
No 430
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=57.73 E-value=1e+02 Score=25.03 Aligned_cols=113 Identities=10% Similarity=0.062 Sum_probs=54.5
Q ss_pred eeeeCC--CceeeeEEeC-CeEEEEecCCcEEEEEcCC-CCCCCCCcceEEEeCCC-CCceEEEeeeCCEEEEEeCCeEE
Q psy16020 10 PLNKIL--DTALPPVHVQ-GRVVCALADGSVAIFRRGP-DGQWDLSKYHTVTLGLP-HHSVRSLAAVYNKVWCGYKNKIH 84 (151)
Q Consensus 10 ~~i~l~--~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~-~~~wd~~~~~~i~l~~~-~~pV~~m~~v~~~Lw~g~~n~I~ 84 (151)
..+++| .++++|.+.+ ++-|+-.++|.| |+... +.+|... ......+ ....+++.+.+++.|+....-+.
T Consensus 9 ~~v~l~t~~~l~dV~F~d~~~G~~VG~~g~i--l~T~DGG~tW~~~---~~~~~~~~~~~l~~I~f~~~~g~ivG~~g~l 83 (302)
T PF14870_consen 9 QQVSLPTDKPLLDVAFVDPNHGWAVGAYGTI--LKTTDGGKTWQPV---SLDLDNPFDYHLNSISFDGNEGWIVGEPGLL 83 (302)
T ss_dssp EEEE-S-SS-EEEEEESSSS-EEEEETTTEE--EEESSTTSS-EE--------S-----EEEEEEEETTEEEEEEETTEE
T ss_pred EEeecCCCCceEEEEEecCCEEEEEecCCEE--EEECCCCcccccc---ccCCCccceeeEEEEEecCCceEEEcCCceE
Confidence 455666 6999999874 678888889864 44433 3468422 2233321 24577888888898987655444
Q ss_pred EEeCCCCcEEEEEEecCC-CCCceeEEEEeCCEEEEEEcCCCeE
Q psy16020 85 VVDPKSLVVLKSFDAHPR-RESQVRQMTWAGDGVWVSIRLDSTL 127 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~-~~~~I~~m~~~~~~vwis~~~d~~l 127 (151)
.--.+.++--.++...+. +.+...-....+..+++...+.+..
T Consensus 84 l~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~~~~G~iy 127 (302)
T PF14870_consen 84 LHTTDGGKTWERVPLSSKLPGSPFGITALGDGSAELAGDRGAIY 127 (302)
T ss_dssp EEESSTTSS-EE----TT-SS-EEEEEEEETTEEEEEETT--EE
T ss_pred EEecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEEEcCCCcEE
Confidence 444556665555442211 1222322333444556665554433
No 431
>PF13964 Kelch_6: Kelch motif
Probab=56.25 E-value=35 Score=19.19 Aligned_cols=26 Identities=19% Similarity=0.169 Sum_probs=16.2
Q ss_pred EeeeCCEEEEEeC--------CeEEEEeCCCCcE
Q psy16020 68 LAAVYNKVWCGYK--------NKIHVVDPKSLVV 93 (151)
Q Consensus 68 m~~v~~~Lw~g~~--------n~I~vid~~t~~i 93 (151)
++..+++||+-.| +.++++|++|.+-
T Consensus 7 ~v~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W 40 (50)
T PF13964_consen 7 AVVVGGKIYVFGGYDNSGKYSNDVERYDPETNTW 40 (50)
T ss_pred EEEECCEEEEECCCCCCCCccccEEEEcCCCCcE
Confidence 4455666665442 4588888887653
No 432
>PF05131 Pep3_Vps18: Pep3/Vps18/deep orange family; InterPro: IPR007810 This region is found in a number of proteins identified as being involved in Golgi function and vacuolar sorting. The molecular function of this region is unknown. Proteins containing this domain also contain a C-terminal ring finger domain.
Probab=54.83 E-value=78 Score=22.83 Aligned_cols=61 Identities=10% Similarity=0.057 Sum_probs=45.7
Q ss_pred CCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcC
Q psy16020 62 HHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRL 123 (151)
Q Consensus 62 ~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~ 123 (151)
..++.+|++.+=++-.-++++|.+++.-+.++...-.. ......+..|+.+. ..+|+-..+
T Consensus 33 ~~~p~si~lT~~H~llL~~~~l~~vn~L~~~vV~e~~~-~~~~~~~~gl~~D~~~~t~W~ys~~ 95 (147)
T PF05131_consen 33 SSPPLSIALTEFHLLLLYSDRLIAVNRLNNKVVFEESL-LETGGKILGLCRDPSSNTFWLYSSN 95 (147)
T ss_pred CCCcceEEeeceeeeEEeCCEEEEEEecCCcEEEEEEe-ccCCcceeeEEEcCCCCeEEEEeCC
Confidence 36688999988888889999999999999998655544 33446788888873 466855443
No 433
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=54.30 E-value=80 Score=28.66 Aligned_cols=119 Identities=14% Similarity=0.157 Sum_probs=65.4
Q ss_pred eCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeee----------CCEEEEEeCC-eEEEEeCCCC
Q psy16020 24 VQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAV----------YNKVWCGYKN-KIHVVDPKSL 91 (151)
Q Consensus 24 ~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v----------~~~Lw~g~~n-~I~vid~~t~ 91 (151)
.++.+|+...-..+...+-+.+ ..|..+......+.....-+|-+..- ..+++....+ ++..+|++|+
T Consensus 213 vgdtlYvcTphn~v~ALDa~TGkekWkydp~~~~nv~~~~~tCrgVsy~~a~a~~k~pc~~rIflpt~DarlIALdA~tG 292 (773)
T COG4993 213 VGDTLYVCTPHNRVFALDAATGKEKWKYDPNLKSNVDPQHQTCRGVSYGAAKADAKSPCPRRIFLPTADARLIALDADTG 292 (773)
T ss_pred ECCEEEEecCcceeEEeeccCCceeeecCCCCCCCcccccccccceecccccccccCCCceeEEeecCCceEEEEeCCCC
Confidence 4668888888777777666542 24765542111111100112222221 2348888754 8999999999
Q ss_pred cEEEEEEecCCC--------------------CCceeEEEEeC---CEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 92 VVLKSFDAHPRR--------------------ESQVRQMTWAG---DGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 92 ~i~~~~~~h~~~--------------------~~~I~~m~~~~---~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
++.-+|..|-.- +-.+..+...+ ++ .-+-..++.+|=+|+.+++++-..|.
T Consensus 293 kvc~~Fa~~Ga~~l~tgm~~~k~g~y~~tS~p~~~~~~~v~~g~v~Dn-~st~e~sgVir~fdv~tG~l~w~~D~ 366 (773)
T COG4993 293 KVCWSFANKGALNLETGMKDTKDGLYYGTSPPEFGVKGIVIAGSVADN-ESTWEPSGVIRGFDVLTGKLTWAGDP 366 (773)
T ss_pred cEeheeccCceeeeeccCCCCCCCeEeecCCCcccceeEEEeeccCCC-ceeeccCccccccccccCceEEccCC
Confidence 998888754210 00111111110 01 12234578899999999888877664
No 434
>KOG0379|consensus
Probab=53.43 E-value=1.5e+02 Score=25.57 Aligned_cols=111 Identities=16% Similarity=0.133 Sum_probs=66.2
Q ss_pred eEEeCCeEEEEecCC--------cEEEEEcCCCCCCCCCcceEEEeCCC--CCceEEEeeeCCEEEEEeC-C-------e
Q psy16020 21 PVHVQGRVVCALADG--------SVAIFRRGPDGQWDLSKYHTVTLGLP--HHSVRSLAAVYNKVWCGYK-N-------K 82 (151)
Q Consensus 21 i~~~~~~v~vgl~nG--------~l~v~~~~~~~~wd~~~~~~i~l~~~--~~pV~~m~~v~~~Lw~g~~-n-------~ 82 (151)
.....+.+||..+.| .|.+|+... ..|.... .-|.. ...=.+|..++++||.-.| + .
T Consensus 66 ~~~~~~~~~vfGG~~~~~~~~~~dl~~~d~~~-~~w~~~~----~~g~~p~~r~g~~~~~~~~~l~lfGG~~~~~~~~~~ 140 (482)
T KOG0379|consen 66 AVLIGNKLYVFGGYGSGDRLTDLDLYVLDLES-QLWTKPA----ATGDEPSPRYGHSLSAVGDKLYLFGGTDKKYRNLNE 140 (482)
T ss_pred eeEECCEEEEECCCCCCCccccceeEEeecCC-ccccccc----ccCCCCCcccceeEEEECCeEEEEccccCCCCChhh
Confidence 333477777766554 266666543 3453322 12221 1223567777888775553 2 6
Q ss_pred EEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeCCEEEEEEcC------CCeEEEEeCCccc
Q psy16020 83 IHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAGDGVWVSIRL------DSTLRMYNAHTYQ 136 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~~~vwis~~~------d~~l~lwd~~t~~ 136 (151)
++.+|+.|.+-..--.. .......=+.++..++.+++.++- .+.+.+||..+.+
T Consensus 141 l~~~d~~t~~W~~l~~~~~~P~~r~~Hs~~~~g~~l~vfGG~~~~~~~~ndl~i~d~~~~~ 201 (482)
T KOG0379|consen 141 LHSLDLSTRTWSLLSPTGDPPPPRAGHSATVVGTKLVVFGGIGGTGDSLNDLHIYDLETST 201 (482)
T ss_pred eEeccCCCCcEEEecCcCCCCCCcccceEEEECCEEEEECCccCcccceeeeeeecccccc
Confidence 99999998774433222 223344566677778888877664 5568889988754
No 435
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=52.92 E-value=1.2e+02 Score=24.42 Aligned_cols=81 Identities=11% Similarity=0.209 Sum_probs=47.0
Q ss_pred eEEEeeeC-CEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEE-EEcCCCeEEEEeCC-----
Q psy16020 65 VRSLAAVY-NKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWV-SIRLDSTLRMYNAH----- 133 (151)
Q Consensus 65 V~~m~~v~-~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwi-s~~~d~~l~lwd~~----- 133 (151)
|+++..-+ +.+-++++ +.|++||.+|++++=++.+...++-....-.++ -+.-|+ ....++.|.|||-.
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN~~~~~~ 225 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDNANSDFN 225 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcCCCCCCC
Confidence 45555543 46778887 479999999999999987662211111111111 111122 22467788899884
Q ss_pred ----ccceeeeEeCCc
Q psy16020 134 ----TYQHLQDVDIEP 145 (151)
Q Consensus 134 ----t~~~l~~idi~~ 145 (151)
+.-++-++|.+.
T Consensus 226 ~~~~s~~~v~~ld~~~ 241 (299)
T PF14269_consen 226 GTEPSRGLVLELDPET 241 (299)
T ss_pred CCcCCCceEEEEECCC
Confidence 455556666543
No 436
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=52.89 E-value=84 Score=22.61 Aligned_cols=70 Identities=13% Similarity=0.198 Sum_probs=41.8
Q ss_pred EEEEEe-CCeEEEEeCCCCcE--------EEEEEecCCCCCceeEEEEeCC----EE-EEEEcCCCeEEEEeCCccceee
Q psy16020 74 KVWCGY-KNKIHVVDPKSLVV--------LKSFDAHPRRESQVRQMTWAGD----GV-WVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 74 ~Lw~g~-~n~I~vid~~t~~i--------~~~~~~h~~~~~~I~~m~~~~~----~v-wis~~~d~~l~lwd~~t~~~l~ 139 (151)
.|-|++ +++|+|.++..... .+.+.. .+.|++|+...- +. -+-.+..+.|..||++.-.-+.
T Consensus 12 cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNi----n~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~F 87 (136)
T PF14781_consen 12 CLACATTGGKVFIHNPHERGQRTGRQDSDISFLNI----NQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLF 87 (136)
T ss_pred eEEEEecCCEEEEECCCccccccccccCceeEEEC----CCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhh
Confidence 456666 68999999875432 222332 347888876631 11 4466778889999998644443
Q ss_pred eEeCCccc
Q psy16020 140 DVDIEPYV 147 (151)
Q Consensus 140 ~idi~~~v 147 (151)
--++..-+
T Consensus 88 yke~~DGv 95 (136)
T PF14781_consen 88 YKEVPDGV 95 (136)
T ss_pred hhhCccce
Confidence 33333333
No 437
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=52.86 E-value=1.2e+02 Score=24.54 Aligned_cols=111 Identities=11% Similarity=0.097 Sum_probs=54.2
Q ss_pred CCceeeeEEeCC-eEEEEecCCcEEEEEc--CCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCC
Q psy16020 15 LDTALPPVHVQG-RVVCALADGSVAIFRR--GPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKS 90 (151)
Q Consensus 15 ~~~V~~i~~~~~-~v~vgl~nG~l~v~~~--~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t 90 (151)
+..|..|-+.++ .+|... .|-...|+. .....|.- ..+++..-..-+-.|++. ++++|++.++-......+.
T Consensus 186 ~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~---~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~S~Dg 261 (302)
T PF14870_consen 186 SRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSE---PIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLVSTDG 261 (302)
T ss_dssp SS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE------B-TTSS--S-EEEEEESSSS-EEEEESTT-EEEESST
T ss_pred cceehhceecCCCCEEEEe-CCcEEEEccCCCCcccccc---ccCCcccCceeeEEEEecCCCCEEEEeCCccEEEeCCC
Confidence 357777777654 677766 555555554 22223421 112221111445666775 4889999986444556778
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEE
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMY 130 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lw 130 (151)
++--+.-..-.+-......|++.+... | ..++++.|--|
T Consensus 262 GktW~~~~~~~~~~~n~~~i~f~~~~~gf-~lG~~G~ll~~ 301 (302)
T PF14870_consen 262 GKTWQKDRVGENVPSNLYRIVFVNPDKGF-VLGQDGVLLRY 301 (302)
T ss_dssp TSS-EE-GGGTTSSS---EEEEEETTEEE-EE-STTEEEEE
T ss_pred CccceECccccCCCCceEEEEEcCCCceE-EECCCcEEEEe
Confidence 887666654333334577888875533 6 55666665444
No 438
>PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=51.99 E-value=1.4e+02 Score=24.72 Aligned_cols=80 Identities=18% Similarity=0.093 Sum_probs=49.7
Q ss_pred ceeeeeeCCC------ceeeeEEe--CCeEEEEecCCc--EEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEE
Q psy16020 7 TPYPLNKILD------TALPPVHV--QGRVVCALADGS--VAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVW 76 (151)
Q Consensus 7 ~~l~~i~l~~------~V~~i~~~--~~~v~vgl~nG~--l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw 76 (151)
+.||.=+..+ -|.+|.|. +++|+.|=+||. |-||+.+. +.-+.-.|.+ .|.-....+.+..+
T Consensus 91 rLLWkesih~~~~WaGEVSdIlYdP~~D~LLlAR~DGh~nLGvy~ldr------~~g~~~~L~~--~ps~KG~~~~D~a~ 162 (339)
T PF09910_consen 91 RLLWKESIHDKTKWAGEVSDILYDPYEDRLLLARADGHANLGVYSLDR------RTGKAEKLSS--NPSLKGTLVHDYAC 162 (339)
T ss_pred EEEEecccCCccccccchhheeeCCCcCEEEEEecCCcceeeeEEEcc------cCCceeeccC--CCCcCceEeeeeEE
Confidence 4455555543 68999995 568999999996 78887752 1222334544 33334444433333
Q ss_pred EEe-----C-CeEEEEeCCCCcEE
Q psy16020 77 CGY-----K-NKIHVVDPKSLVVL 94 (151)
Q Consensus 77 ~g~-----~-n~I~vid~~t~~i~ 94 (151)
.+- | ..|.++|+.+++..
T Consensus 163 F~i~~~~~g~~~i~~~Dli~~~~~ 186 (339)
T PF09910_consen 163 FGINNFHKGVSGIHCLDLISGKWV 186 (339)
T ss_pred EeccccccCCceEEEEEccCCeEE
Confidence 332 2 36999999998863
No 439
>PF01403 Sema: Sema domain; InterPro: IPR001627 The Sema domain occurs in semaphorins, which are a large family of secreted and transmembrane proteins, some of which function as repellent signals during axon guidance. Sema domains also occur in a hepatocyte growth factor receptor, in SEX protein [] and in viral proteins. CD100 (also called SEMA4D) is associated with PTPase and serine kinase activity. CD100 increases PMA, CD3 and CD2 induced T cell proliferation, increases CD45 induced T cell adhesion, induces B cell homotypic adhesion and down-regulates B cell expression of CD23. The Sema domain is characterised by a conserved set of cysteine residues, which form four disulphide bonds to stabilise the structure. The Sema domain fold is a variation of the beta propeller topology, with seven blades radially arranged around a central axis. Each blade contains a four- stranded (strands A to D) antiparallel beta sheet. The inner strand of each blade (A) lines the channel at the centre of the propeller, with strands B and C of the same repeat radiating outward, and strand D of the next repeat forming the outer edge of the blade. The large size of the Sema domain is not due to a single inserted domain but results from the presence of additional secondary structure elements inserted in most of the blades. The Sema domain uses a 'loop and hook' system to close the circle between the first and the last blades. The blades are constructed sequentially with an N-terminal beta- strand closing the circle by providing the outermost strand (D) of the seventh (C-terminal) blade. The beta-propeller is further stabilised by an extension of the N terminus, providing an additional, fifth beta-strand on the outer edge of blade 6 [, , ]. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0005515 protein binding; PDB: 3NVX_A 3NVQ_A 3OL2_A 1OLZ_B 3OKT_A 3AL9_B 3OKY_A 3AL8_B 3NVN_A 3OKW_A ....
Probab=51.83 E-value=38 Score=28.45 Aligned_cols=45 Identities=7% Similarity=0.008 Sum_probs=0.0
Q ss_pred EEEEecCCcEE-EEEcCCCCCCCCC----cceEEEeCCCCCceEEEeeeCCE
Q psy16020 28 VVCALADGSVA-IFRRGPDGQWDLS----KYHTVTLGLPHHSVRSLAAVYNK 74 (151)
Q Consensus 28 v~vgl~nG~l~-v~~~~~~~~wd~~----~~~~i~l~~~~~pV~~m~~v~~~ 74 (151)
+|+|.++|.|. +.....++ ... ....+.+....+||+.|.+..++
T Consensus 384 ~flGT~~G~l~K~v~~~~~~--~~~~~~~~iee~~~~~~~~pI~~~~l~~~~ 433 (433)
T PF01403_consen 384 AFLGTDDGRLHKKVVLSNSS--SGHYESYIIEEIQVFPDSEPIQSMKLSPKQ 433 (433)
T ss_dssp EEEEETTSEEEEEEEESSSS--TCT-EEEEEEEEE-STSC-EEEEEEEETTT
T ss_pred EEEecCCceEEEEEEecCCC--CcccccEEEEEEeecCCCCceEEEEeccCC
No 440
>KOG2395|consensus
Probab=50.99 E-value=46 Score=29.52 Aligned_cols=57 Identities=14% Similarity=0.299 Sum_probs=40.7
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEE-eCCCCCceEEEeee--CCEEEEEeCCeEEEEeCC
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPK 89 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-l~~~~~pV~~m~~v--~~~Lw~g~~n~I~vid~~ 89 (151)
.+++.||.-+|.|..|+|- +.. -...++ || .||.-+... ++-|-|.|.+.+.++|+.
T Consensus 441 sG~IvvgS~~GdIRLYdri-~~~----AKTAlPgLG---~~I~hVdvtadGKwil~Tc~tyLlLi~t~ 500 (644)
T KOG2395|consen 441 SGYIVVGSLKGDIRLYDRI-GRR----AKTALPGLG---DAIKHVDVTADGKWILATCKTYLLLIDTL 500 (644)
T ss_pred CceEEEeecCCcEEeehhh-hhh----hhhcccccC---CceeeEEeeccCcEEEEecccEEEEEEEe
Confidence 5689999999999999983 111 111222 44 788888775 466889999999999865
No 441
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=50.12 E-value=1.8e+02 Score=25.46 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=62.0
Q ss_pred eeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeC-CCCcEEEEEE
Q psy16020 20 PPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDP-KSLVVLKSFD 98 (151)
Q Consensus 20 ~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~-~t~~i~~~~~ 98 (151)
-++..++++|++- +|.+.+.+.. .|...++-.+-.-+--++..++.|-++..+.|+.++. ++-+..-+.+
T Consensus 106 ivKtdG~~iy~s~-~~KvYvi~~~--------pp~~~~i~~~i~ecg~l~l~~nvL~i~~~~git~yn~~e~~k~vw~~~ 176 (603)
T COG4880 106 IVKTDGERIYVSV-NGKVYVIDKN--------PPLLETIDCPIPECGILALGGNVLAIGEVGGITLYNLYESSKKVWVYN 176 (603)
T ss_pred hcccCCcEEEEEe-CCeEEEEcCC--------CchhhhcccCCccceEEEEcCcEEEEEEeCCEEEEEeccccceeEEEe
Confidence 3455667888885 8898887643 3333344322233445566678899999999999988 5555444433
Q ss_pred ecCCCCCceeEEEEeCCEEEEEEcCC---CeEEEEeCC
Q psy16020 99 AHPRRESQVRQMTWAGDGVWVSIRLD---STLRMYNAH 133 (151)
Q Consensus 99 ~h~~~~~~I~~m~~~~~~vwis~~~d---~~l~lwd~~ 133 (151)
-. .++|-+= .-+..+++..+++ +-+-+|+-+
T Consensus 177 fn---GsyvdaR-lynG~lYiv~rk~~~~cPiv~iN~~ 210 (603)
T COG4880 177 FN---GSYVDAR-LYNGELYIVARKSSIDCPIVVINGR 210 (603)
T ss_pred cC---Cceeeee-eeCCEEEEEEcccCCCCCEEEECCe
Confidence 21 2355543 3366677777754 667667743
No 442
>KOG4497|consensus
Probab=49.75 E-value=14 Score=30.84 Aligned_cols=79 Identities=11% Similarity=0.184 Sum_probs=57.3
Q ss_pred CceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeee
Q psy16020 63 HSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
.|--|....++-+...++-++.|-|.+|+|+.+-|..- .+|..+...-+ .+......++.|.+|+....|=--+
T Consensus 11 ~~~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~cl----dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ck 86 (447)
T KOG4497|consen 11 NPFCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFLCL----DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCK 86 (447)
T ss_pred CCceeECCCCCeeeeeeeeEEEEeccchhhHHHHHHHH----HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEE
Confidence 34444444556555555668999999999987776642 37777777754 4467788899999999998888888
Q ss_pred EeCCc
Q psy16020 141 VDIEP 145 (151)
Q Consensus 141 idi~~ 145 (151)
||..+
T Consensus 87 Ideg~ 91 (447)
T KOG4497|consen 87 IDEGQ 91 (447)
T ss_pred eccCC
Confidence 87644
No 443
>KOG4441|consensus
Probab=48.85 E-value=1.9e+02 Score=25.56 Aligned_cols=124 Identities=15% Similarity=0.147 Sum_probs=70.5
Q ss_pred CceeeeeeCCCceeeeEEeCCeEEE-EecCCc-----EEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020 6 PTPYPLNKILDTALPPVHVQGRVVC-ALADGS-----VAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~v~v-gl~nG~-----l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~ 79 (151)
|..+.+++-+-.=+.+...+|.+|| |+.||. +-.|+.. ...|..-.+-.. . ..-...+..+++||+..
T Consensus 361 W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~-~~~W~~va~m~~--~---r~~~gv~~~~g~iYi~G 434 (571)
T KOG4441|consen 361 WTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPV-TNKWTPVAPMLT--R---RSGHGVAVLGGKLYIIG 434 (571)
T ss_pred eeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCC-CCcccccCCCCc--c---eeeeEEEEECCEEEEEc
Confidence 3334444444455566667788776 445553 5555543 234643221111 0 11123444578999876
Q ss_pred C--------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCC-----eEEEEeCCccce
Q psy16020 80 K--------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS-----TLRMYNAHTYQH 137 (151)
Q Consensus 80 ~--------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~-----~l~lwd~~t~~~ 137 (151)
| +++..+|+.|.+-...-.-.+. ..=..++..++.+++-++.|+ .+..||.++-+-
T Consensus 435 G~~~~~~~l~sve~YDP~t~~W~~~~~M~~~--R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W 503 (571)
T KOG4441|consen 435 GGDGSSNCLNSVECYDPETNTWTLIAPMNTR--RSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQW 503 (571)
T ss_pred CcCCCccccceEEEEcCCCCceeecCCcccc--cccceEEEECCEEEEECCccCCCccceEEEEcCCCCce
Confidence 5 5799999998774433332222 233446777888888888765 377788887543
No 444
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=47.14 E-value=1e+02 Score=25.64 Aligned_cols=26 Identities=12% Similarity=0.079 Sum_probs=18.9
Q ss_pred CceEEEeeeC-CEEEEEeCCeEEEEeC
Q psy16020 63 HSVRSLAAVY-NKVWCGYKNKIHVVDP 88 (151)
Q Consensus 63 ~pV~~m~~v~-~~Lw~g~~n~I~vid~ 88 (151)
.+..+-...+ ++-|+.+++++|+||=
T Consensus 27 ~~~~~gi~~e~g~Aw~~~d~~l~vW~Y 53 (422)
T PF08801_consen 27 SPCSMGIFPEIGRAWIVVDNRLYVWNY 53 (422)
T ss_dssp TS-EEEEE-TTSEEEEEETTEEEEEE-
T ss_pred cceEEEEEcccCEEEEEECCEEEEEec
Confidence 4555555555 8999999999999995
No 445
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=46.39 E-value=1.7e+02 Score=24.35 Aligned_cols=117 Identities=16% Similarity=0.141 Sum_probs=67.3
Q ss_pred CceeeeEEeCCe--EEEEecC---CcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CCeEEE
Q psy16020 16 DTALPPVHVQGR--VVCALAD---GSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKIHV 85 (151)
Q Consensus 16 ~~V~~i~~~~~~--v~vgl~n---G~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I~v 85 (151)
+.++-|...+++ +|++-.+ |.++.|+.+.+ |.-.+-+ ...+.. ..| ..+.+-+ ..|+++. .+.|.|
T Consensus 40 ~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln--~~~~~g-~~p-~yvsvd~~g~~vf~AnY~~g~v~v 115 (346)
T COG2706 40 GNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLN--RQTLPG-SPP-CYVSVDEDGRFVFVANYHSGSVSV 115 (346)
T ss_pred CCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEee--ccccCC-CCC-eEEEECCCCCEEEEEEccCceEEE
Confidence 466667776665 9999887 67999999743 5322211 112221 144 4444433 3588887 478888
Q ss_pred EeCCC-CcEEEE--EEecCCC------CCc-eeEEEEeCCE--EEEEEcCCCeEEEEeCCccc
Q psy16020 86 VDPKS-LVVLKS--FDAHPRR------ESQ-VRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 86 id~~t-~~i~~~--~~~h~~~------~~~-I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~ 136 (151)
+-+.+ |.+... +..|+.+ +++ ++.....+++ ||+..-.--.|.+|+...+.
T Consensus 116 ~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~ 178 (346)
T COG2706 116 YPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGK 178 (346)
T ss_pred EEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCc
Confidence 87643 443322 3334432 222 6666666555 45444445568888888543
No 446
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=45.87 E-value=1.6e+02 Score=23.69 Aligned_cols=96 Identities=20% Similarity=0.351 Sum_probs=60.6
Q ss_pred cEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeee-CCEEEEEe-----C-C--eEEEEeCCCCcEEEEEEecC--CC
Q psy16020 36 SVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAV-YNKVWCGY-----K-N--KIHVVDPKSLVVLKSFDAHP--RR 103 (151)
Q Consensus 36 ~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v-~~~Lw~g~-----~-n--~I~vid~~t~~i~~~~~~h~--~~ 103 (151)
.||.|+.. ..+|. .++. -...|+.|... +++|++|- + + .+-.||.++..- ..+.... +-
T Consensus 17 ~lC~yd~~-~~qW~-------~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~i 87 (281)
T PF12768_consen 17 GLCLYDTD-NSQWS-------SPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSI 87 (281)
T ss_pred EEEEEECC-CCEee-------cCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccC
Confidence 48999864 45674 2221 23789999987 68888775 2 2 477888776643 2333311 22
Q ss_pred CCceeEEEE---eCCEEEEEEc---CCCeEEEEeCCccceeee
Q psy16020 104 ESQVRQMTW---AGDGVWVSIR---LDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 104 ~~~I~~m~~---~~~~vwis~~---~d~~l~lwd~~t~~~l~~ 140 (151)
..+|+.+.. +++.+|++++ .+..|.-||=.+...+..
T Consensus 88 pgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~ 130 (281)
T PF12768_consen 88 PGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGS 130 (281)
T ss_pred CCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccc
Confidence 356777777 4667887766 466788888776555444
No 447
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=45.40 E-value=1.4e+02 Score=23.11 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=44.6
Q ss_pred CcceEEEeCCCCCceEEEeeeCCEEEEEe-CCeEEEEeCC--CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcC---
Q psy16020 51 SKYHTVTLGLPHHSVRSLAAVYNKVWCGY-KNKIHVVDPK--SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRL--- 123 (151)
Q Consensus 51 ~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~I~vid~~--t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~--- 123 (151)
..+..++... +|......-.+.|.++. |++|-++|.+ -.+...+|..= +.|..|.++..|= .++.-+
T Consensus 9 ~sQ~v~~~~~--EP~~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv----~~V~~l~y~~~GDYlvTlE~k~~ 82 (215)
T PF14761_consen 9 GSQNVVPCEQ--EPTAVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTV----GRVLQLVYSEAGDYLVTLEEKNK 82 (215)
T ss_pred CCceeecccc--CcceeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcch----hheeEEEeccccceEEEEEeecC
Confidence 3444444433 66544333338888765 6799999977 45566677633 3788888884433 333332
Q ss_pred CC---eEEEEe
Q psy16020 124 DS---TLRMYN 131 (151)
Q Consensus 124 d~---~l~lwd 131 (151)
.. .+|+|-
T Consensus 83 ~~~~~fvR~Y~ 93 (215)
T PF14761_consen 83 RSPVDFVRAYF 93 (215)
T ss_pred CccceEEEEEE
Confidence 23 677764
No 448
>KOG0918|consensus
Probab=45.01 E-value=1.2e+02 Score=25.97 Aligned_cols=86 Identities=12% Similarity=0.130 Sum_probs=51.5
Q ss_pred CCCCceeeeeeCCC---ceeeeEEe----CCeEEEEecCC--cEEEEEcCCCCCCCCCcceEEE---eCC---C--CCce
Q psy16020 3 YPHPTPYPLNKILD---TALPPVHV----QGRVVCALADG--SVAIFRRGPDGQWDLSKYHTVT---LGL---P--HHSV 65 (151)
Q Consensus 3 ~~~~~~l~~i~l~~---~V~~i~~~----~~~v~vgl~nG--~l~v~~~~~~~~wd~~~~~~i~---l~~---~--~~pV 65 (151)
.++.+-.+.|+|.+ .+++|.+. .+..|+|.|-| -...| .+++.+|..+..-.++ +.+ + ..=|
T Consensus 236 w~~~~~~QtidL~~~gllpleiRfLh~p~~~~~fvg~Al~s~i~~~~-k~~~~tws~~~visvp~~kv~~w~~~eMP~LI 314 (476)
T KOG0918|consen 236 WSPGELKQTIDLGDTGLLPLEIRFLHNPSKATGFVGCALSSNIFRFF-KNSDDTWSAEVVISVPPLKVENWILPEMPGLI 314 (476)
T ss_pred cCCccceeEEecCCCCcceEEeeeccCCCcccceeeeeccCCceeee-eccccccceeEEEecCccccccccCcccchhh
Confidence 45677888999986 78888773 34566665554 44444 4455788654322111 111 1 1446
Q ss_pred EEEeee-CCE-EEEEeC--CeEEEEeCC
Q psy16020 66 RSLAAV-YNK-VWCGYK--NKIHVVDPK 89 (151)
Q Consensus 66 ~~m~~v-~~~-Lw~g~~--n~I~vid~~ 89 (151)
+-|++. +++ ||+.++ +-|.=+|.+
T Consensus 315 TDilISmDDRFLYvs~WLHGDirQYdIs 342 (476)
T KOG0918|consen 315 TDILISLDDRFLYVSNWLHGDIRQYDIS 342 (476)
T ss_pred heeEEeecCcEEEEEeeeecceeeeccC
Confidence 777774 555 898885 667666654
No 449
>KOG3630|consensus
Probab=44.97 E-value=74 Score=30.83 Aligned_cols=87 Identities=16% Similarity=0.182 Sum_probs=59.3
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRR 103 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~ 103 (151)
...+.|+|+.|.|+....... ....++++ ...+|++.. +.++.+|-.| ++.=| .-+|++++++..-+..
T Consensus 170 n~av~l~dlsl~V~~~~~~~~----~v~s~p~t---~~~Tav~WSprGKQl~iG~nnGt~vQy-~P~leik~~ip~Pp~~ 241 (1405)
T KOG3630|consen 170 NSAVDLSDLSLRVKSTKQLAQ----NVTSFPVT---NSQTAVLWSPRGKQLFIGRNNGTEVQY-EPSLEIKSEIPEPPVE 241 (1405)
T ss_pred hhhhhccccchhhhhhhhhhh----hhcccCcc---cceeeEEeccccceeeEecCCCeEEEe-ecccceeecccCCCcC
Confidence 577889999999987642110 11112332 566777775 5789999865 67666 5589999998876554
Q ss_pred C-CceeEEEEeCCEEEEEE
Q psy16020 104 E-SQVRQMTWAGDGVWVSI 121 (151)
Q Consensus 104 ~-~~I~~m~~~~~~vwis~ 121 (151)
+ ..|.++.+.+...|+..
T Consensus 242 e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 242 ENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred CCcceeEEEEecceeEEEE
Confidence 4 56899988888887543
No 450
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=43.93 E-value=1.8e+02 Score=23.81 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=51.2
Q ss_pred eeeEEeCCeEEEEecCCcEEEEE-cCCCCCCCCCcceEE-E-eCC----CCCceEEEeee-CCEEEEEeC----------
Q psy16020 19 LPPVHVQGRVVCALADGSVAIFR-RGPDGQWDLSKYHTV-T-LGL----PHHSVRSLAAV-YNKVWCGYK---------- 80 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~nG~l~v~~-~~~~~~wd~~~~~~i-~-l~~----~~~pV~~m~~v-~~~Lw~g~~---------- 80 (151)
..|...++-|||+. ...|..|. .+.++.-|- ..+.+ . ++. +....+.+.+- ++.||++.+
T Consensus 75 ~Gi~~~~~GlyV~~-~~~i~~~~d~~gdg~ad~-~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~ 152 (367)
T TIGR02604 75 TGLAVAVGGVYVAT-PPDILFLRDKDGDDKADG-EREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRP 152 (367)
T ss_pred cceeEecCCEEEeC-CCeEEEEeCCCCCCCCCC-ccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccC
Confidence 44444444489886 44566553 333332221 22222 2 222 12445566664 568998665
Q ss_pred -----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEE
Q psy16020 81 -----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSI 121 (151)
Q Consensus 81 -----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~ 121 (151)
+.|+-+|+++.+.+.--.++ .....+++++.|- |++-
T Consensus 153 ~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~----rnp~Gl~~d~~G~l~~td 201 (367)
T TIGR02604 153 GTSDESRQGLGGGLFRYNPDGGKLRVVAHGF----QNPYGHSVDSWGDVFFCD 201 (367)
T ss_pred CCccCcccccCceEEEEecCCCeEEEEecCc----CCCccceECCCCCEEEEc
Confidence 35888888887765433333 3456677765654 5443
No 451
>PRK04792 tolB translocation protein TolB; Provisional
Probab=43.91 E-value=2e+02 Score=24.33 Aligned_cols=61 Identities=13% Similarity=0.014 Sum_probs=34.4
Q ss_pred CCEEEEEeC----CeEEEEeCCCCcEEEE-EEecCCCCCceeEEEEeCC--EEEEEEcCCC--eEEEEeCCccce
Q psy16020 72 YNKVWCGYK----NKIHVVDPKSLVVLKS-FDAHPRRESQVRQMTWAGD--GVWVSIRLDS--TLRMYNAHTYQH 137 (151)
Q Consensus 72 ~~~Lw~g~~----n~I~vid~~t~~i~~~-~~~h~~~~~~I~~m~~~~~--~vwis~~~d~--~l~lwd~~t~~~ 137 (151)
++.|+..+. ..||++|+++++..+- ++++. .....++++ .++.+..+++ .|.++|..+.+.
T Consensus 317 G~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~-----~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~ 386 (448)
T PRK04792 317 GKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQ-----NLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM 386 (448)
T ss_pred CCEEEEEECCCCCceEEEEECCCCCEEEEecCCCC-----CcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe
Confidence 355666552 3799999999886553 33322 222345544 4444444444 466678776653
No 452
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=43.84 E-value=2e+02 Score=24.36 Aligned_cols=71 Identities=17% Similarity=0.138 Sum_probs=33.7
Q ss_pred ecCCcEEEEEcCCCCCC-----CCCcceEEEeCCC---CCceEEEeeeCCEE-EEEeCCeEEEEeCCCCcEEEEEEecCC
Q psy16020 32 LADGSVAIFRRGPDGQW-----DLSKYHTVTLGLP---HHSVRSLAAVYNKV-WCGYKNKIHVVDPKSLVVLKSFDAHPR 102 (151)
Q Consensus 32 l~nG~l~v~~~~~~~~w-----d~~~~~~i~l~~~---~~pV~~m~~v~~~L-w~g~~n~I~vid~~t~~i~~~~~~h~~ 102 (151)
..||.-.+|.-+.+|.| |++..+..+|-+- +..--++..-++.+ |+-.+.+++.+|++|++...-++...+
T Consensus 44 t~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~ 123 (386)
T PF14583_consen 44 TDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDD 123 (386)
T ss_dssp -TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TT
T ss_pred CCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcc
Confidence 44565555544444544 4555566666431 11123333335666 455567999999999998777776654
No 453
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=43.02 E-value=1.9e+02 Score=23.74 Aligned_cols=41 Identities=12% Similarity=0.162 Sum_probs=23.9
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcC
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRL 123 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~ 123 (151)
.++++|+.+.+=...-. -+.....-.+++..++.+++.+++
T Consensus 190 ~v~~YD~~t~~W~~~~~-~p~~~~~~~a~v~~~~~iYv~GG~ 230 (376)
T PRK14131 190 EVLSYDPSTNQWKNAGE-SPFLGTAGSAVVIKGNKLWLINGE 230 (376)
T ss_pred eEEEEECCCCeeeECCc-CCCCCCCcceEEEECCEEEEEeee
Confidence 58999998866433211 111112345667778888777654
No 454
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=42.90 E-value=1.1e+02 Score=25.20 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=42.3
Q ss_pred eCCEEEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020 71 VYNKVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 71 v~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~ 136 (151)
-++.||.++ +|-|--+|+.++.-+ .+..-..-..--..+-.++. .+|+|....+.+..||..+.+
T Consensus 198 pdGsvwyaslagnaiaridp~~~~ae-v~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s 265 (353)
T COG4257 198 PDGSVWYASLAGNAIARIDPFAGHAE-VVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS 265 (353)
T ss_pred CCCcEEEEeccccceEEcccccCCcc-eecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc
Confidence 468999995 899999999988543 23322110112233333433 459999999999999987543
No 455
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=42.25 E-value=1.9e+02 Score=23.73 Aligned_cols=80 Identities=16% Similarity=0.254 Sum_probs=50.9
Q ss_pred eEEEeCCCCCceEEEee-eCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcC-------
Q psy16020 54 HTVTLGLPHHSVRSLAA-VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRL------- 123 (151)
Q Consensus 54 ~~i~l~~~~~pV~~m~~-v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~------- 123 (151)
+...||.-.+| +.+.+ -++..|+--. +-|.=+|.+|+++++---.-+......+..++++.|. |.+.++
T Consensus 96 ~~ypLg~Ga~P-hgiv~gpdg~~Witd~~~aI~R~dpkt~evt~f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLd 174 (353)
T COG4257 96 ETYPLGSGASP-HGIVVGPDGSAWITDTGLAIGRLDPKTLEVTRFPLPLEHADANLETAVFDPWGNLWFTGQIGAYGRLD 174 (353)
T ss_pred EEEecCCCCCC-ceEEECCCCCeeEecCcceeEEecCcccceEEeecccccCCCcccceeeCCCccEEEeeccccceecC
Confidence 45566652244 23333 2467998775 4799999999998654222222234677788887766 988876
Q ss_pred --CCeEEEEeCCc
Q psy16020 124 --DSTLRMYNAHT 134 (151)
Q Consensus 124 --d~~l~lwd~~t 134 (151)
.+.|++|++-.
T Consensus 175 Pa~~~i~vfpaPq 187 (353)
T COG4257 175 PARNVISVFPAPQ 187 (353)
T ss_pred cccCceeeeccCC
Confidence 35577887653
No 456
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=41.95 E-value=1.8e+02 Score=23.84 Aligned_cols=66 Identities=17% Similarity=0.149 Sum_probs=39.4
Q ss_pred EEEeee-CCEEEEEe--------------CCeEEEEeCC--CCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEE
Q psy16020 66 RSLAAV-YNKVWCGY--------------KNKIHVVDPK--SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLR 128 (151)
Q Consensus 66 ~~m~~v-~~~Lw~g~--------------~n~I~vid~~--t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~ 128 (151)
+.|++- +++||++. +++|++++-. +++..+...-. +.....+.|++.+++++++. .+...+
T Consensus 17 ~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa-~~l~~p~Gi~~~~~GlyV~~-~~~i~~ 94 (367)
T TIGR02604 17 IAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFA-EELSMVTGLAVAVGGVYVAT-PPDILF 94 (367)
T ss_pred ceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEee-cCCCCccceeEecCCEEEeC-CCeEEE
Confidence 355554 47899986 2489999765 35544322211 22346688888888877763 444555
Q ss_pred EEeCC
Q psy16020 129 MYNAH 133 (151)
Q Consensus 129 lwd~~ 133 (151)
+.|+.
T Consensus 95 ~~d~~ 99 (367)
T TIGR02604 95 LRDKD 99 (367)
T ss_pred EeCCC
Confidence 55653
No 457
>KOG1920|consensus
Probab=41.35 E-value=2.2e+02 Score=27.78 Aligned_cols=76 Identities=12% Similarity=0.257 Sum_probs=55.2
Q ss_pred CceEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020 63 HSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
.-|.++.+. .+.+.++.+ +.|.+.|++|+..+-- +.. +..|.+|..+++.-|+..-.....-++.+.+++++.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eiv--g~v--d~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~ 144 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIV--GNV--DNGISAASWSPDEELLALITGRQTLLFMTKDFEPIA 144 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeee--eec--cCceEEEeecCCCcEEEEEeCCcEEEEEeccccchh
Confidence 578888886 367888875 7888889999886533 222 248999999988877777776666677777777765
Q ss_pred eEe
Q psy16020 140 DVD 142 (151)
Q Consensus 140 ~id 142 (151)
+=.
T Consensus 145 E~~ 147 (1265)
T KOG1920|consen 145 EKP 147 (1265)
T ss_pred ccc
Confidence 543
No 458
>KOG1027|consensus
Probab=40.63 E-value=67 Score=29.98 Aligned_cols=40 Identities=20% Similarity=0.387 Sum_probs=32.3
Q ss_pred eCCEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC
Q psy16020 71 VYNKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG 114 (151)
Q Consensus 71 v~~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~ 114 (151)
.++.+|.|. .|..|++|++|++...+|..++ ++..+.+.|
T Consensus 106 sdGi~ysg~k~d~~~lvD~~tg~~~~tf~~~~----~~~~~v~~g 146 (903)
T KOG1027|consen 106 SDGILYSGSKQDIWYLVDPKTGEIDYTFNTAE----PIKQLVYLG 146 (903)
T ss_pred CCCeEEecccccceEEecCCccceeEEEecCC----cchhheecc
Confidence 357899999 4899999999999999999886 555555544
No 459
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=40.24 E-value=52 Score=30.09 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=30.4
Q ss_pred CceeeeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcC
Q psy16020 6 PTPYPLNKILDTALPPVHV--QGRVVCALADGSVAIFRRG 43 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~ 43 (151)
.+.+..+.++..|.+|... +..+.++..||+|-+|+|.
T Consensus 250 l~~~~~i~~~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~ 289 (753)
T PF11635_consen 250 LRRLDDITLNKRVVSITSPELDIVVAFAFSDGSIEFRDRN 289 (753)
T ss_pred EEEecccccCCeEEEEEecccCcEEEEEEcCCeEEEEecC
Confidence 3455566777888888774 5679999999999999996
No 460
>KOG2041|consensus
Probab=39.93 E-value=88 Score=29.04 Aligned_cols=71 Identities=8% Similarity=0.109 Sum_probs=46.0
Q ss_pred CceEEEeeeCCEEEEEeC---CeEEEEeCC---------------CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcC
Q psy16020 63 HSVRSLAAVYNKVWCGYK---NKIHVVDPK---------------SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRL 123 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~---n~I~vid~~---------------t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~ 123 (151)
-...|..-+.++=|.+|| +.+.|+..+ ++...+++++|.. +|..+.+..+.- +.+-+.
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~---sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNA---SVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcc---eEEEEEeccccccccccCC
Confidence 556677777544444443 556665433 2335577889964 777777764443 788888
Q ss_pred CCeEEEEeCCccc
Q psy16020 124 DSTLRMYNAHTYQ 136 (151)
Q Consensus 124 d~~l~lwd~~t~~ 136 (151)
++.|.+|=.-.++
T Consensus 92 ~GlIiVWmlykgs 104 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGS 104 (1189)
T ss_pred CceEEEEeeeccc
Confidence 9999999765443
No 461
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=39.45 E-value=40 Score=28.02 Aligned_cols=77 Identities=13% Similarity=0.230 Sum_probs=52.8
Q ss_pred CceEEEeeeCCEEEEEeCCeEEEEeCCCC----cEEEEEEecCC---------CCCceeEEEEeCCEEEEEEcCCCeEEE
Q psy16020 63 HSVRSLAAVYNKVWCGYKNKIHVVDPKSL----VVLKSFDAHPR---------RESQVRQMTWAGDGVWVSIRLDSTLRM 129 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~n~I~vid~~t~----~i~~~~~~h~~---------~~~~I~~m~~~~~~vwis~~~d~~l~l 129 (151)
+|..|+.+ .|-.+.+.|++-|.+-- ...+.|+-.-| --++|..+.++++|-+|..+.=-++++
T Consensus 230 hp~~cn~f----mYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvki 305 (460)
T COG5170 230 HPEMCNVF----MYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKI 305 (460)
T ss_pred CHhHcceE----EEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEE
Confidence 66666655 35566788998887611 12222332211 134789999999999999999999999
Q ss_pred EeCCc-cceeeeEeC
Q psy16020 130 YNAHT-YQHLQDVDI 143 (151)
Q Consensus 130 wd~~t-~~~l~~idi 143 (151)
||..- ..++.+|++
T Consensus 306 wDvnm~k~pikTi~~ 320 (460)
T COG5170 306 WDVNMAKNPIKTIPM 320 (460)
T ss_pred EecccccCCceeech
Confidence 99985 677777743
No 462
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=39.20 E-value=2.4e+02 Score=23.84 Aligned_cols=80 Identities=8% Similarity=-0.105 Sum_probs=46.7
Q ss_pred ceeeeEE---eCCeEEEEecCCcEEEEEcCCCCCCCCCc-ceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCc
Q psy16020 17 TALPPVH---VQGRVVCALADGSVAIFRRGPDGQWDLSK-YHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLV 92 (151)
Q Consensus 17 ~V~~i~~---~~~~v~vgl~nG~l~v~~~~~~~~wd~~~-~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~ 92 (151)
+.++|.+ .+++-|+-..+|.|.-= .+.+.+|.... +... -.+...|...|.+.+++.|+....-+...-.+.++
T Consensus 89 ~L~~V~F~~~d~~~GwAVG~~G~IL~T-~DGG~tW~~~~~~~~~-~~~~~~~l~~v~f~~~~g~~vG~~G~il~T~DgG~ 166 (398)
T PLN00033 89 VLLDIAFVPDDPTHGFLLGTRQTLLET-KDGGKTWVPRSIPSAE-DEDFNYRFNSISFKGKEGWIIGKPAILLHTSDGGE 166 (398)
T ss_pred ceEEEEeccCCCCEEEEEcCCCEEEEE-cCCCCCceECccCccc-ccccccceeeeEEECCEEEEEcCceEEEEEcCCCC
Confidence 7899998 45688888888864432 23445786421 1111 11112577888888888998754433333345566
Q ss_pred EEEEEE
Q psy16020 93 VLKSFD 98 (151)
Q Consensus 93 i~~~~~ 98 (151)
--....
T Consensus 167 tW~~~~ 172 (398)
T PLN00033 167 TWERIP 172 (398)
T ss_pred CceECc
Confidence 544443
No 463
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=38.85 E-value=2.8e+02 Score=24.55 Aligned_cols=106 Identities=16% Similarity=0.357 Sum_probs=61.5
Q ss_pred CCCceeeeEEeC---Ce-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CE-EEEEeC---CeE
Q psy16020 14 ILDTALPPVHVQ---GR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NK-VWCGYK---NKI 83 (151)
Q Consensus 14 l~~~V~~i~~~~---~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~-Lw~g~~---n~I 83 (151)
+.++|++....+ +. +..|-..-.+.+|+... .+....|+++=+.|.+.. .. |.+|-+ ++|
T Consensus 273 ~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~----------Nl~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni 342 (561)
T COG5354 273 LKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG----------NLRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNI 342 (561)
T ss_pred ccccceeeeecccCCceeEEecccccceeeccccc----------ceEEecCCcccccccccCcccEEEEecCCccccce
Confidence 467888888733 23 33334455677776531 233333446666666543 33 667776 479
Q ss_pred EEEeCCC-CcEEEEEEecCCCCCceeEEEEeCCEEEEE-------EcCCCeEEEEeCCc
Q psy16020 84 HVVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDGVWVS-------IRLDSTLRMYNAHT 134 (151)
Q Consensus 84 ~vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~vwis-------~~~d~~l~lwd~~t 134 (151)
-+||+.. +++...|.+-.- +.. .+++++-++- .+.|+.++|||...
T Consensus 343 ~i~~~~~rf~~~~~~~~~n~---s~~--~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 343 EIFDPAGRFKVAGAFNGLNT---SYC--DWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred EEeccCCceEEEEEeecCCc---eEe--eccCCceEEEecCCCcccccCcceEEEEecC
Confidence 9999875 445557776531 221 2333333221 35699999999874
No 464
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []. This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A ....
Probab=38.82 E-value=67 Score=17.44 Aligned_cols=26 Identities=27% Similarity=0.332 Sum_probs=15.7
Q ss_pred EEeeeCCEEEEEeC--------CeEEEEeCCCCc
Q psy16020 67 SLAAVYNKVWCGYK--------NKIHVVDPKSLV 92 (151)
Q Consensus 67 ~m~~v~~~Lw~g~~--------n~I~vid~~t~~ 92 (151)
+++..+++||+-.| ++++++|+++.+
T Consensus 6 ~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~~~~ 39 (47)
T PF01344_consen 6 AAVVVGNKIYVIGGYDGNNQPTNSVEVYDPETNT 39 (47)
T ss_dssp EEEEETTEEEEEEEBESTSSBEEEEEEEETTTTE
T ss_pred EEEEECCEEEEEeeecccCceeeeEEEEeCCCCE
Confidence 44556677775442 357777777655
No 465
>KOG1920|consensus
Probab=38.49 E-value=3.9e+02 Score=26.20 Aligned_cols=69 Identities=7% Similarity=0.039 Sum_probs=44.7
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEeCCeEEEEeCCCC
Q psy16020 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGYKNKIHVVDPKSL 91 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~~n~I~vid~~t~ 91 (151)
+-|.++.|. .+.++++++.|.|.+-+.. ....-.+|....-|.+|....++ +....+....++.+.++
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~e--------t~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f 140 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPE--------TLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDF 140 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEccc--------ccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccc
Confidence 367777664 6789999999999887543 22222344444788888887544 55556655555556655
Q ss_pred c
Q psy16020 92 V 92 (151)
Q Consensus 92 ~ 92 (151)
.
T Consensus 141 ~ 141 (1265)
T KOG1920|consen 141 E 141 (1265)
T ss_pred c
Confidence 4
No 466
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=38.38 E-value=2.1e+02 Score=22.92 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=36.5
Q ss_pred EEeeeCCEEEEEeC---CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----------CeEEEEe
Q psy16020 67 SLAAVYNKVWCGYK---NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----------STLRMYN 131 (151)
Q Consensus 67 ~m~~v~~~Lw~g~~---n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----------~~l~lwd 131 (151)
+.+.++++||+.-| +.++++|.+..+ --..+..-+.....=..++..++.+++.++.+ ..+..||
T Consensus 12 ~~~~~~~~vyv~GG~~~~~~~~~d~~~~~~~W~~l~~~p~~~R~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd 91 (346)
T TIGR03547 12 TGAIIGDKVYVGLGSAGTSWYKLDLKKPSKGWQKIADFPGGPRNQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYD 91 (346)
T ss_pred eEEEECCEEEEEccccCCeeEEEECCCCCCCceECCCCCCCCcccceEEEECCEEEEEeCCCCCCCCCcceecccEEEEE
Confidence 44566788887544 468888864211 11111111100112234556677888777653 3477788
Q ss_pred CCcc
Q psy16020 132 AHTY 135 (151)
Q Consensus 132 ~~t~ 135 (151)
.++.
T Consensus 92 ~~~~ 95 (346)
T TIGR03547 92 PKKN 95 (346)
T ss_pred CCCC
Confidence 7753
No 467
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=37.10 E-value=59 Score=16.25 Aligned_cols=13 Identities=23% Similarity=0.207 Sum_probs=5.7
Q ss_pred CCeEEEEeCCCCc
Q psy16020 80 KNKIHVVDPKSLV 92 (151)
Q Consensus 80 ~n~I~vid~~t~~ 92 (151)
++.|+|-|..+..
T Consensus 12 ~g~i~VaD~~n~r 24 (28)
T PF01436_consen 12 DGNIYVADSGNHR 24 (28)
T ss_dssp TSEEEEEECCCTE
T ss_pred CCCEEEEECCCCE
Confidence 3444444444333
No 468
>PF14339 DUF4394: Domain of unknown function (DUF4394)
Probab=36.60 E-value=1.6e+02 Score=23.21 Aligned_cols=33 Identities=6% Similarity=0.132 Sum_probs=24.9
Q ss_pred CceEEEee--eCCEEEEE-eCCeEEEEeCCCCcEEE
Q psy16020 63 HSVRSLAA--VYNKVWCG-YKNKIHVVDPKSLVVLK 95 (151)
Q Consensus 63 ~pV~~m~~--v~~~Lw~g-~~n~I~vid~~t~~i~~ 95 (151)
+.+..|.+ .+++||.= ..++||.||+.|+....
T Consensus 27 e~l~GID~Rpa~G~LYgl~~~g~lYtIn~~tG~aT~ 62 (236)
T PF14339_consen 27 ESLVGIDFRPANGQLYGLGSTGRLYTINPATGAATP 62 (236)
T ss_pred CeEEEEEeecCCCCEEEEeCCCcEEEEECCCCeEEE
Confidence 66777776 35888855 56899999999998433
No 469
>KOG2584|consensus
Probab=35.58 E-value=2.7e+02 Score=24.25 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=26.2
Q ss_pred CceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEE
Q psy16020 63 HSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKS 96 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~ 96 (151)
..|-.+..-.+++.+|++--|.|||++..+....
T Consensus 388 AkifnlYprKGrIavGsDADiVIwdp~at~tIS~ 421 (522)
T KOG2584|consen 388 AKIFNLYPRKGRIAVGSDADIVIWDPNATKTISA 421 (522)
T ss_pred hhheeccCcCceecccCCCcEEEECCCcceEecc
Confidence 5566666667899999999999999997664433
No 470
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=34.24 E-value=2.8e+02 Score=23.26 Aligned_cols=48 Identities=25% Similarity=0.422 Sum_probs=38.6
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
.|.|++. +|+...++.--. ..|..|.+..+.-++....|+.+++||..
T Consensus 62 ~I~iys~-sG~ll~~i~w~~---~~iv~~~wt~~e~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 62 SIQIYSS-SGKLLSSIPWDS---GRIVGMGWTDDEELVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEEECC-CCCEeEEEEECC---CCEEEEEECCCCeEEEEEcCCEEEEEeCC
Confidence 4999965 566666666433 48999999988779999999999999986
No 471
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=34.05 E-value=2.7e+02 Score=23.08 Aligned_cols=114 Identities=12% Similarity=0.066 Sum_probs=61.5
Q ss_pred CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEE-eCCCCCceEEEeeeCCEEEEEeC-CeE
Q psy16020 6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHHSVRSLAAVYNKVWCGYK-NKI 83 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-l~~~~~pV~~m~~v~~~Lw~g~~-n~I 83 (151)
++.+..+.+..--.+..-.++++||+--+--+.+++.. |.+.|...- ...+..--...++.++.-|++|. +-+
T Consensus 119 P~~~~~lnt~gyaygv~vsGn~aYVadlddgfLivdvs-----dpssP~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL 193 (370)
T COG5276 119 PTLIGFLNTDGYAYGVYVSGNYAYVADLDDGFLIVDVS-----DPSSPQLAGRYALPGGDTHDVAISGNYAYVAWRDGGL 193 (370)
T ss_pred cceeccccCCceEEEEEecCCEEEEeeccCcEEEEECC-----CCCCceeeeeeccCCCCceeEEEecCeEEEEEeCCCe
Confidence 34444444444444444467789988755556666654 223333221 11111222456677899999985 468
Q ss_pred EEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCC
Q psy16020 84 HVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS 125 (151)
Q Consensus 84 ~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~ 125 (151)
.+.|...-. .-.|.+|-+.+..+.....+++..++..-+.+
T Consensus 194 ~ivDVSnp~-sPvli~~~n~g~g~~sv~vsdnr~y~vvy~eg 234 (370)
T COG5276 194 TIVDVSNPH-SPVLIGSYNTGPGTYSVSVSDNRAYLVVYDEG 234 (370)
T ss_pred EEEEccCCC-CCeEEEEEecCCceEEEEecCCeeEEEEcccc
Confidence 888865433 23344555544456666666665554444433
No 472
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=33.98 E-value=47 Score=22.27 Aligned_cols=18 Identities=17% Similarity=0.348 Sum_probs=14.3
Q ss_pred eEEEEeCCCCcEEEEEEe
Q psy16020 82 KIHVVDPKSLVVLKSFDA 99 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~ 99 (151)
.|.|+|.+|+++.+.+..
T Consensus 69 vVkViD~~T~eVIRqIP~ 86 (107)
T PF03646_consen 69 VVKVIDKETGEVIRQIPP 86 (107)
T ss_dssp EEEEEETTT-SEEEEE-H
T ss_pred EEEEEECCCCcEEEeCCc
Confidence 589999999999999873
No 473
>PRK04043 tolB translocation protein TolB; Provisional
Probab=31.61 E-value=3.2e+02 Score=23.04 Aligned_cols=62 Identities=10% Similarity=0.013 Sum_probs=34.4
Q ss_pred CCEEEEEe---C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcC--CCeEEEEeCCccce
Q psy16020 72 YNKVWCGY---K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRL--DSTLRMYNAHTYQH 137 (151)
Q Consensus 72 ~~~Lw~g~---~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~--d~~l~lwd~~t~~~ 137 (151)
+++|.... + ..||++|+.+++. +++..+.. .-..-.++++| +..+..+ .+.|.+.|..+++.
T Consensus 244 G~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~---~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~ 313 (419)
T PRK04043 244 GSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPG---IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV 313 (419)
T ss_pred CCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCC---ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe
Confidence 35665443 2 3799999988874 44543321 11223456554 4333322 23688888877655
No 474
>PF14836 Ubiquitin_3: Ubiquitin-like domain; PDB: 3JYU_A 4A3O_B 3PPA_A 3T9L_A 4A3P_A 3PV1_A.
Probab=31.06 E-value=19 Score=23.92 Aligned_cols=20 Identities=35% Similarity=0.785 Sum_probs=10.9
Q ss_pred EEecCCcEEEEEc-CCCCCCC
Q psy16020 30 CALADGSVAIFRR-GPDGQWD 49 (151)
Q Consensus 30 vgl~nG~l~v~~~-~~~~~wd 49 (151)
+|+.+|.+.+++- ++||+|.
T Consensus 67 a~L~~gQ~vliE~rn~DGtWP 87 (88)
T PF14836_consen 67 AGLYDGQVVLIEERNEDGTWP 87 (88)
T ss_dssp TT--TTEEEEEEE--TTS--T
T ss_pred ccCcCCCEEEEEeeccCCCCC
Confidence 4577888888865 5689983
No 475
>PF15525 DUF4652: Domain of unknown function (DUF4652)
Probab=30.82 E-value=1.7e+02 Score=22.41 Aligned_cols=48 Identities=10% Similarity=0.191 Sum_probs=34.8
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020 80 KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 80 ~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t 134 (151)
|+.+|+++..|++...-.+.+. ..++|-.+...|+.+=+ .+.+||..-
T Consensus 139 GGnLy~~nl~tg~~~~ly~~~d-kkqQVis~e~~gd~L~L------ki~vYddd~ 186 (200)
T PF15525_consen 139 GGNLYKYNLNTGNLTELYEWKD-KKQQVISAEKNGDNLNL------KINVYDDDD 186 (200)
T ss_pred CCeEEEEEccCCceeEeeeccc-cceeEEEEEEeCCEEEE------EEEEEecCc
Confidence 5799999999999988877653 35688888888876522 345555543
No 476
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=29.50 E-value=4.2e+02 Score=23.84 Aligned_cols=124 Identities=11% Similarity=0.049 Sum_probs=72.2
Q ss_pred CCCCCceeeeeeCCCceeeeEEe---------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEe-
Q psy16020 2 EYPHPTPYPLNKILDTALPPVHV---------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLA- 69 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~~V~~i~~~---------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~- 69 (151)
.+.-.+.+.+-++.+-| -..|. +.+-+|||+|-.|.-.+....|. .....+.-+ -+..-.|..
T Consensus 496 DIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gN----Ki~v~esKdY~tKn~Fss~~t 570 (776)
T COG5167 496 DIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGN----KIKVVESKDYKTKNKFSSGMT 570 (776)
T ss_pred ecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCC----ceeeeeehhcccccccccccc
Confidence 34445566666777655 22332 34789999998765555443331 111111111 012233333
Q ss_pred eeCCEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 70 AVYNKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 70 ~v~~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
.-.+.+.+|+ ++-|..+|.-.-.-+.-+.+-. ..|..+....+|-|+-+.=-+.|.|-|+.
T Consensus 571 TesGyIa~as~kGDirLyDRig~rAKtalP~lG---~aIk~idvta~Gk~ilaTCk~yllL~d~~ 632 (776)
T COG5167 571 TESGYIAAASRKGDIRLYDRIGKRAKTALPGLG---DAIKHIDVTANGKHILATCKNYLLLTDVP 632 (776)
T ss_pred ccCceEEEecCCCceeeehhhcchhhhcCcccc---cceeeeEeecCCcEEEEeecceEEEEecc
Confidence 3457888888 4789999865444444444443 47888888877777666667788888876
No 477
>KOG3535|consensus
Probab=28.75 E-value=1.4e+02 Score=25.77 Aligned_cols=61 Identities=15% Similarity=0.228 Sum_probs=41.9
Q ss_pred eCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe---CCEE-EEEEcCCCeEEEEeCCccce
Q psy16020 71 VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA---GDGV-WVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 71 v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~---~~~v-wis~~~d~~l~lwd~~t~~~ 137 (151)
+.-++|+--. +-|.|+|-+||.+++.+.+| .|.-++.+ .... ++.+. .+.=+.|-..|.+.
T Consensus 90 HKqrI~l~Is~~GIKI~DEKtGav~H~hpV~-----~ISfIArD~tD~RAFGyVcG~-eG~hkF~aIKTaQa 155 (557)
T KOG3535|consen 90 HKQRITLQISIDGIKILDEKTGAVLHNHPVS-----RISFIARDSTDARAFGYVCGE-EGKHKFYAIKTAQA 155 (557)
T ss_pred ccceEEEEEeecceEEeeccccceeccCccc-----eeeeeecccccccceeeeecC-CCceeEEEEecccc
Confidence 3467998765 67999999999999888877 45555544 1122 44444 47778887777553
No 478
>PF08806 Sep15_SelM: Sep15/SelM redox domain; InterPro: IPR014912 Sep15 and SelM are eukaryotic selenoproteins that have a thioredoxin-like domain and a surface accessible active site redox motif []. This suggests that they function as thiol-disulphide isomerases involved in disulphide bond formation in the endoplasmic reticulum []. ; PDB: 2A4H_A 2A2P_A.
Probab=28.58 E-value=65 Score=20.71 Aligned_cols=26 Identities=12% Similarity=0.234 Sum_probs=15.2
Q ss_pred EEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 120 SIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 120 s~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
..+.++.|.++|.. ++...+|+|+.-
T Consensus 38 i~G~~P~L~l~d~~-g~~~E~i~i~~w 63 (78)
T PF08806_consen 38 IPGAPPELVLLDED-GEEVERINIEKW 63 (78)
T ss_dssp ESS---EEEEE-SS-S--SEEEE-SSS
T ss_pred eCCCCCEEEEEcCC-CCEEEEEEcccC
Confidence 45678999999965 899999998763
No 479
>PF10387 DUF2442: Protein of unknown function (DUF2442); InterPro: IPR018841 Several proteins in this entry are annotated as being putative molybdopterin-guanine dinucleotide biosynthesis proteins, but this has not been confirmed. The function of these proteins is therefore not known. ; PDB: 2AUW_B 2X8N_A 3K8R_B.
Probab=28.07 E-value=1.6e+02 Score=18.38 Aligned_cols=27 Identities=22% Similarity=0.448 Sum_probs=20.8
Q ss_pred eeeeEEeCC-eEEEEecCCcEEEEEcCC
Q psy16020 18 ALPPVHVQG-RVVCALADGSVAIFRRGP 44 (151)
Q Consensus 18 V~~i~~~~~-~v~vgl~nG~l~v~~~~~ 44 (151)
|.+..+.++ ++++-.+||....++...
T Consensus 1 i~~V~~~~~~~L~v~f~dG~~~~~dl~~ 28 (79)
T PF10387_consen 1 IISVKPLDDYRLRVTFSDGETRIFDLSP 28 (79)
T ss_dssp -EEEEEETTTEEEEEETTS-EEEEECCC
T ss_pred CeEEEEcCCcEEEEEEcCCCEEEEEhHH
Confidence 345677777 899999999999998863
No 480
>PRK04043 tolB translocation protein TolB; Provisional
Probab=27.72 E-value=3.7e+02 Score=22.62 Aligned_cols=59 Identities=8% Similarity=0.041 Sum_probs=35.5
Q ss_pred EEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEc--CCCeEEEEeCCccce
Q psy16020 75 VWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIR--LDSTLRMYNAHTYQH 137 (151)
Q Consensus 75 Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~--~d~~l~lwd~~t~~~ 137 (151)
++..+ . ..||++|..+++..+-.. .. .....-.++++| +.++.+ .++.|.++|..+.+.
T Consensus 203 i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~---g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~ 269 (419)
T PRK04043 203 FYYTSYGERKPTLYKYNLYTGKKEKIAS-SQ---GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL 269 (419)
T ss_pred EEEEEccCCCCEEEEEECCCCcEEEEec-CC---CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE
Confidence 66533 3 369999999998765443 21 233444566554 433333 346788889876653
No 481
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=27.52 E-value=4e+02 Score=22.88 Aligned_cols=61 Identities=20% Similarity=0.167 Sum_probs=41.9
Q ss_pred CCeEEEEeCCCCcEEEEEEecC----CCC--------------------CceeEEEEeC--CEEEEEEcCCCeEEEEeCC
Q psy16020 80 KNKIHVVDPKSLVVLKSFDAHP----RRE--------------------SQVRQMTWAG--DGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 80 ~n~I~vid~~t~~i~~~~~~h~----~~~--------------------~~I~~m~~~~--~~vwis~~~d~~l~lwd~~ 133 (151)
++.|..+| .+|++...+..-. ... -.++++.+.+ +.+.+|.|+-+.|-..|-+
T Consensus 223 ~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~ 301 (477)
T PF05935_consen 223 EDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYR 301 (477)
T ss_dssp S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-T
T ss_pred cCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECC
Confidence 57899999 9999999977321 001 2588998886 7889999999999999988
Q ss_pred ccceeeeE
Q psy16020 134 TYQHLQDV 141 (151)
Q Consensus 134 t~~~l~~i 141 (151)
|.+....+
T Consensus 302 t~~i~Wil 309 (477)
T PF05935_consen 302 TGKIKWIL 309 (477)
T ss_dssp TS-EEEEE
T ss_pred CCcEEEEe
Confidence 88887766
No 482
>PF08955 BofC_C: BofC C-terminal domain; InterPro: IPR015050 The C-terminal domain of the bacterial protein, bypass of forespore C (BofC), contains a three-stranded beta-sheet and three alpha-helices. The exact function is unknown []. ; PDB: 2BW2_A.
Probab=27.13 E-value=31 Score=22.22 Aligned_cols=19 Identities=16% Similarity=0.350 Sum_probs=12.7
Q ss_pred CCeEEEEe-cCCcEEEEEcC
Q psy16020 25 QGRVVCAL-ADGSVAIFRRG 43 (151)
Q Consensus 25 ~~~v~vgl-~nG~l~v~~~~ 43 (151)
+.+.|.|+ +||.|++|+=.
T Consensus 8 K~ngYfGi~~dG~LslF~G~ 27 (75)
T PF08955_consen 8 KENGYFGISEDGVLSLFEGP 27 (75)
T ss_dssp GT---EEEETTTEEEEBSSS
T ss_pred hcCeeEEEcCCCcEEEEecC
Confidence 45789998 59999999743
No 483
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=26.94 E-value=3.3e+02 Score=24.90 Aligned_cols=71 Identities=13% Similarity=0.086 Sum_probs=46.2
Q ss_pred eeeCCEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe----------CCE------EEEEEcCCCeEEEEe
Q psy16020 69 AAVYNKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA----------GDG------VWVSIRLDSTLRMYN 131 (151)
Q Consensus 69 ~~v~~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~----------~~~------vwis~~~d~~l~lwd 131 (151)
+.+++.||+-. -|+++.+|+.|++.+=+++.... .....++..+ +.. |+ ---.|+.|.--|
T Consensus 211 LkvgdtlYvcTphn~v~ALDa~TGkekWkydp~~~-~nv~~~~~tCrgVsy~~a~a~~k~pc~~rIf-lpt~DarlIALd 288 (773)
T COG4993 211 LKVGDTLYVCTPHNRVFALDAATGKEKWKYDPNLK-SNVDPQHQTCRGVSYGAAKADAKSPCPRRIF-LPTADARLIALD 288 (773)
T ss_pred eEECCEEEEecCcceeEEeeccCCceeeecCCCCC-CCcccccccccceecccccccccCCCceeEE-eecCCceEEEEe
Confidence 34688998655 68999999999999888774322 2222222111 111 22 234577888889
Q ss_pred CCccceeeeE
Q psy16020 132 AHTYQHLQDV 141 (151)
Q Consensus 132 ~~t~~~l~~i 141 (151)
+.|++.+.++
T Consensus 289 A~tGkvc~~F 298 (773)
T COG4993 289 ADTGKVCWSF 298 (773)
T ss_pred CCCCcEehee
Confidence 9999888775
No 484
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=26.44 E-value=3.2e+02 Score=21.44 Aligned_cols=74 Identities=15% Similarity=0.159 Sum_probs=48.3
Q ss_pred EeCCCCCceEEEeeeC--CEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEe
Q psy16020 57 TLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYN 131 (151)
Q Consensus 57 ~l~~~~~pV~~m~~v~--~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd 131 (151)
++.....-+..+++.. ++|||-.+ ..|+.+|. ++++++++.-... .=...+++.|++.+ ++-.+++.|..++
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~--~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGF--GDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS---SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCC--CCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 4443335588999973 78999886 48999997 5899999875532 34677778887774 4445689999998
Q ss_pred CC
Q psy16020 132 AH 133 (151)
Q Consensus 132 ~~ 133 (151)
..
T Consensus 93 ~~ 94 (248)
T PF06977_consen 93 ID 94 (248)
T ss_dssp E-
T ss_pred Ee
Confidence 83
No 485
>KOG4693|consensus
Probab=26.07 E-value=3.7e+02 Score=22.07 Aligned_cols=108 Identities=17% Similarity=0.226 Sum_probs=57.5
Q ss_pred cEEEEEcCCCCCCCCCcceE-EEeCCCCCceEEEeeeCCEEEE--EeC-------CeEEEEeCCCCcE-EEEEEecCCCC
Q psy16020 36 SVAIFRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAAVYNKVWC--GYK-------NKIHVVDPKSLVV-LKSFDAHPRRE 104 (151)
Q Consensus 36 ~l~v~~~~~~~~wd~~~~~~-i~l~~~~~pV~~m~~v~~~Lw~--g~~-------n~I~vid~~t~~i-~~~~~~h~~~~ 104 (151)
+|.+++.. .+.|.-..+.. ++.|. .=.++-.-++++|. |+. |.+|.||++|..- +-+-.+.-...
T Consensus 217 ~i~~ld~~-T~aW~r~p~~~~~P~GR---RSHS~fvYng~~Y~FGGYng~ln~HfndLy~FdP~t~~W~~I~~~Gk~P~a 292 (392)
T KOG4693|consen 217 TIMALDLA-TGAWTRTPENTMKPGGR---RSHSTFVYNGKMYMFGGYNGTLNVHFNDLYCFDPKTSMWSVISVRGKYPSA 292 (392)
T ss_pred eeEEEecc-ccccccCCCCCcCCCcc---cccceEEEcceEEEecccchhhhhhhcceeecccccchheeeeccCCCCCc
Confidence 35666553 35564322222 22232 22445555666653 442 5689999987541 11122221222
Q ss_pred CceeEEEEeCCEEEEEEcCCC-------------eEEEEeCCccceeeeEeCCccc
Q psy16020 105 SQVRQMTWAGDGVWVSIRLDS-------------TLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 105 ~~I~~m~~~~~~vwis~~~d~-------------~l~lwd~~t~~~l~~idi~~~v 147 (151)
..=+|-.++|..+++.++.++ .+-=.+.-.+.-|..+|++|.+
T Consensus 293 RRRqC~~v~g~kv~LFGGTsP~~~~~~Spt~~~G~~~~~~LiD~SDLHvLDF~PsL 348 (392)
T KOG4693|consen 293 RRRQCSVVSGGKVYLFGGTSPLPCHPLSPTNYNGMISPSGLIDLSDLHVLDFAPSL 348 (392)
T ss_pred ccceeEEEECCEEEEecCCCCCCCCCCCccccCCCCCcccccccccceeeecChhH
Confidence 345666778999988888776 2233334445666777777764
No 486
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=25.99 E-value=3.4e+02 Score=21.63 Aligned_cols=55 Identities=15% Similarity=0.098 Sum_probs=38.2
Q ss_pred ceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEE
Q psy16020 64 SVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVS 120 (151)
Q Consensus 64 pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis 120 (151)
+..+++..+..|++-..+-|-|.+.+|++..+++.-. ....+.-+..++..++++
T Consensus 245 ~p~~~~~~~pyll~~~~~~ievr~l~~~~l~q~i~~~--~~~~~r~L~~~~~~I~~~ 299 (302)
T smart00036 245 MPESFAYHSPYLLAFHDNGIEIRSIKTGELLQELADR--ETRKIRLLGSSDRKILLS 299 (302)
T ss_pred cccEEEEECCEEEEEcCCcEEEEECCCCceEEEEecC--CCcceEEEecCCCeEEEE
Confidence 4457788889999988899999999999999998732 112344443344454433
No 487
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=25.62 E-value=3.6e+02 Score=21.82 Aligned_cols=68 Identities=15% Similarity=0.252 Sum_probs=45.6
Q ss_pred CEEEEEeCC-eEEEEeCC-C-CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 73 NKVWCGYKN-KIHVVDPK-S-LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 73 ~~Lw~g~~n-~I~vid~~-t-~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
++|-+.-.+ .|-+=.++ . ..+..+-++..|...+=+.++.++++- ++..+..++|++||... ..+..|
T Consensus 9 Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I 80 (282)
T PF15492_consen 9 GKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVI 80 (282)
T ss_pred CcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEc
Confidence 444444443 34443333 2 336566678888888899999998877 55566689999999994 555555
No 488
>PF13854 Kelch_5: Kelch motif
Probab=25.52 E-value=1.2e+02 Score=16.38 Aligned_cols=10 Identities=40% Similarity=0.471 Sum_probs=5.8
Q ss_pred CeEEEEeCCC
Q psy16020 81 NKIHVVDPKS 90 (151)
Q Consensus 81 n~I~vid~~t 90 (151)
|.++++|++|
T Consensus 32 ~d~~~l~l~s 41 (42)
T PF13854_consen 32 NDLYVLDLPS 41 (42)
T ss_pred CcEEEEECCC
Confidence 3466666654
No 489
>PF12275 DUF3616: Protein of unknown function (DUF3616); InterPro: IPR022060 This family of proteins is found in bacteria. Proteins in this family are typically between 335 and 392 amino acids in length. There is a conserved GLRGPV sequence motif.
Probab=25.50 E-value=1.6e+02 Score=24.36 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=34.6
Q ss_pred eeeCCEEEEEeC---C--eEEEEeCC---CCcEEEEEEe--------cCCCCCceeEEEEeCCEEEEEEcCCCe
Q psy16020 69 AAVYNKVWCGYK---N--KIHVVDPK---SLVVLKSFDA--------HPRRESQVRQMTWAGDGVWVSIRLDST 126 (151)
Q Consensus 69 ~~v~~~Lw~g~~---n--~I~vid~~---t~~i~~~~~~--------h~~~~~~I~~m~~~~~~vwis~~~d~~ 126 (151)
..-+++||++++ + +++-.+.. -....+.|.. -++.+.=|..|++.+..+|+.+|.+..
T Consensus 7 ~~~d~~l~va~DE~~~i~rL~~~~~~~~~~~~~~~~~~l~~~~~lp~~~~~e~DiEGla~~~gyly~igSHS~k 80 (330)
T PF12275_consen 7 QLPDGRLWVASDETANIERLTLDDAGGEDRFGDHASFPLADFFDLPGPKDKEIDIEGLAYADGYLYVIGSHSRK 80 (330)
T ss_pred EcCCCeEEEEecCCCCeeEEEecCCCcccccccccccccccccccCCCCCcccchhhhhccCCeEEEEccCccC
Confidence 334677999995 2 34444443 1112233332 223345588888988899999988654
No 490
>KOG4497|consensus
Probab=25.26 E-value=2.2e+02 Score=24.02 Aligned_cols=69 Identities=14% Similarity=0.204 Sum_probs=48.3
Q ss_pred CCceEEEeeeCCEEEEEeC-----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020 62 HHSVRSLAAVYNKVWCGYK-----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 62 ~~pV~~m~~v~~~Lw~g~~-----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t 134 (151)
+..+--+++..+.-|++.. |-+.+||...+++-..+.-- .+|......+..= ++-+...+.|++|-..-
T Consensus 318 k~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk----~piraf~WdP~~prL~vctg~srLY~W~psg 392 (447)
T KOG4497|consen 318 KCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQK----HPIRAFEWDPGRPRLVVCTGKSRLYFWAPSG 392 (447)
T ss_pred ccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhc----cceeEEEeCCCCceEEEEcCCceEEEEcCCC
Confidence 3445566667777777764 56999999988876555522 2788888875433 66777778899998764
No 491
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=25.19 E-value=2.4e+02 Score=25.32 Aligned_cols=58 Identities=16% Similarity=0.287 Sum_probs=39.1
Q ss_pred eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee--CCEEEEEeCCeEEEEeCC
Q psy16020 24 VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPK 89 (151)
Q Consensus 24 ~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v--~~~Lw~g~~n~I~vid~~ 89 (151)
..+++-+|.-.|.|..|+|-... -...+ .+| ..|.-+... ++.|-|.|.+.+..+|..
T Consensus 572 esGyIa~as~kGDirLyDRig~r-----AKtalP~lG---~aIk~idvta~Gk~ilaTCk~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKR-----AKTALPGLG---DAIKHIDVTANGKHILATCKNYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcch-----hhhcCcccc---cceeeeEeecCCcEEEEeecceEEEEecc
Confidence 35688888888999999885111 11122 244 455555553 577999999999999865
No 492
>KOG0309|consensus
Probab=24.43 E-value=98 Score=28.79 Aligned_cols=58 Identities=14% Similarity=0.274 Sum_probs=45.5
Q ss_pred EEEEEeC-C-eEEEEeCC---CCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020 74 KVWCGYK-N-KIHVVDPK---SLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 74 ~Lw~g~~-n-~I~vid~~---t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t 134 (151)
-.|+-+. + +-+||+.. +-.|+-.+.+|++ .|+.|.+-++ .|+.+++-|..+.+||.++
T Consensus 82 ~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsr---aitd~n~~~q~pdVlatcsvdt~vh~wd~rS 146 (1081)
T KOG0309|consen 82 PYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSR---AITDINFNPQHPDVLATCSVDTYVHAWDMRS 146 (1081)
T ss_pred ceeEEecCcchhhhhhhhcCCccceEEEEecCcc---ceeccccCCCCCcceeeccccccceeeeccC
Confidence 3677764 3 45677743 5668888889976 8999988855 6799999999999999997
No 493
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=24.32 E-value=4.5e+02 Score=22.44 Aligned_cols=118 Identities=14% Similarity=0.099 Sum_probs=66.3
Q ss_pred eeCCCceeeeEEeCCeEEEEecCCcEEEEEcCC-----C-------------CCCCCCcceEEEeCCCCCceEEEeeeC-
Q psy16020 12 NKILDTALPPVHVQGRVVCALADGSVAIFRRGP-----D-------------GQWDLSKYHTVTLGLPHHSVRSLAAVY- 72 (151)
Q Consensus 12 i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~-----~-------------~~wd~~~~~~i~l~~~~~pV~~m~~v~- 72 (151)
.-+|.|+.-.... +.++++.++..|.-|+... + ..-.+.....+.+| +++-.|..+.
T Consensus 174 ~llPgPl~Y~~~t-Dsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlG---E~~l~i~v~~~ 249 (418)
T PF14727_consen 174 FLLPGPLCYCPRT-DSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLG---EQALDIQVVRF 249 (418)
T ss_pred CCCCcCeEEeecC-CEEEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECC---ceeEEEEEEEc
Confidence 3455554443333 3678888889999998741 1 11233344567888 4666666653
Q ss_pred ----CEEEEEeCCeEEEEeCC-CCcEEEEEEecCCCCCceeEEEEe--CC--EEEEEEcCCCeEEEEeCCc
Q psy16020 73 ----NKVWCGYKNKIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWA--GD--GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 73 ----~~Lw~g~~n~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~--~~--~vwis~~~d~~l~lwd~~t 134 (151)
..+.+=|..++++++.. +++..++++..+-. -.+...... ++ ...+-+..+++|.+|.-.+
T Consensus 250 ~~~~~~IvvLger~Lf~l~~~G~l~~~krLd~~p~~-~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~ 319 (418)
T PF14727_consen 250 SSSESDIVVLGERSLFCLKDNGSLRFQKRLDYNPSC-FCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTT 319 (418)
T ss_pred CCCCceEEEEecceEEEEcCCCeEEEEEecCCceee-EEEEEeecccCCCCceEEEEEecCCeEEEEeCCe
Confidence 35666777889999764 34455666654310 011111001 11 1266677778888776655
No 494
>KOG2041|consensus
Probab=22.10 E-value=6.7e+02 Score=23.64 Aligned_cols=96 Identities=22% Similarity=0.335 Sum_probs=57.3
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-----------CeEEEEeCCCCcEEE
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-----------NKIHVVDPKSLVVLK 95 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-----------n~I~vid~~t~~i~~ 95 (151)
++-|+-+||..-+++..+| ..|-.+..|- .-|-.=.-.++.+-+-|| |+|..+ ..-|++..
T Consensus 231 ~lavcy~nGr~QiMR~eND-----~~Pvv~dtgm--~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fy-sp~G~i~g 302 (1189)
T KOG2041|consen 231 RLAVCYANGRMQIMRSEND-----PEPVVVDTGM--KIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFY-SPYGHIVG 302 (1189)
T ss_pred EEEEEEcCceehhhhhcCC-----CCCeEEeccc--EeecceecCCCcEEEEccCcccccCccccceEEEe-ccchhheE
Confidence 4667777888888865432 2444444432 111111111244444443 456666 33588888
Q ss_pred EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 96 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
+|.+- ++-|+.+.+.|.|+=++..-|+.|.+=+.+
T Consensus 303 tlkvp---g~~It~lsWEg~gLriA~AvdsfiyfanIR 337 (1189)
T KOG2041|consen 303 TLKVP---GSCITGLSWEGTGLRIAIAVDSFIYFANIR 337 (1189)
T ss_pred EEecC---CceeeeeEEcCCceEEEEEecceEEEEeec
Confidence 88865 357999999888888888888877654444
No 495
>PHA02584 34 long tail fiber, proximal subunit; Provisional
Probab=21.58 E-value=6.4e+02 Score=24.76 Aligned_cols=64 Identities=19% Similarity=0.305 Sum_probs=45.2
Q ss_pred EeCCeEEEEeCCCCcEE--EEEEe-----cCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 78 GYKNKIHVVDPKSLVVL--KSFDA-----HPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 78 g~~n~I~vid~~t~~i~--~~~~~-----h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
--|+.|...|++-+..+ -.++. |+-.+..++.|+.. |.|++|.-+....=++||....-++.-|
T Consensus 236 N~GD~I~t~DlD~l~~~~~~~~~vyp~~g~si~~~g~~~~~~~~sg~G~fifd~~~~~W~v~dgD~~~rlr~i 308 (1229)
T PHA02584 236 NHGDMITTVDLDGLNSVNHTTVEVYPGSGHSIGENGVHSIESRTSGDGFFIFDSTEKLWRVWDGDQKVRLRVI 308 (1229)
T ss_pred CCCCeEEEEeccccCcceEEEEEEeCCCCcCcccCceeEEEEecccceEEEEcCCCceEEEEcCCCceEEEEe
Confidence 34678888888866522 22333 43334557777765 8899999999999999999977777666
No 496
>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6
Probab=21.45 E-value=1.3e+02 Score=19.42 Aligned_cols=31 Identities=13% Similarity=0.037 Sum_probs=21.8
Q ss_pred CCCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEE
Q psy16020 2 EYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAI 39 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v 39 (151)
|++..+..+++.||..|... =+.+.||.|.|
T Consensus 56 e~~~g~f~R~~~LP~~vd~~-------~A~~~~GvL~I 86 (90)
T cd06470 56 GIAKRAFERSFNLADHVKVK-------GAELENGLLTI 86 (90)
T ss_pred EEeceEEEEEEECCCCceEC-------eeEEeCCEEEE
Confidence 45567788889999876542 26777887766
No 497
>PRK08868 flagellar protein FlaG; Provisional
Probab=21.21 E-value=83 Score=22.87 Aligned_cols=18 Identities=0% Similarity=0.172 Sum_probs=16.2
Q ss_pred eEEEEeCCCCcEEEEEEe
Q psy16020 82 KIHVVDPKSLVVLKSFDA 99 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~ 99 (151)
-|.|+|.+|+++.|++..
T Consensus 103 VVkViD~~T~EVIRQIP~ 120 (144)
T PRK08868 103 VVTIYEASTGDIIRQIPD 120 (144)
T ss_pred EEEEEECCCCceeeeCCC
Confidence 499999999999999874
No 498
>PF11134 Phage_stabilise: Phage stabilisation protein; InterPro: IPR021098 This entry represents the Bacteriophage P22, Gp10, DNA-stabilising protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are phage proteins involved with stabilising the head assembly unit and condensed DNA within the capsid [].
Probab=21.19 E-value=5.5e+02 Score=22.34 Aligned_cols=64 Identities=20% Similarity=0.151 Sum_probs=45.2
Q ss_pred CceEEEee--eCCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcc
Q psy16020 63 HSVRSLAA--VYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 63 ~pV~~m~~--v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~ 135 (151)
.-.|-..+ +++.+|..||+++|....+ ...+.+ +--.+|+.++..+-+.+..+...+.||..+.
T Consensus 54 GvsRG~~~nt~~~~vYrV~G~kLYqv~~~----vGdI~G-----sgrVsMah~~~sq~V~i~G~~~gYrYdgat~ 119 (469)
T PF11134_consen 54 GVSRGVQYNTVNDTVYRVCGNKLYQVAAE----VGDIAG-----SGRVSMAHSGGSQAVAINGKLKGYRYDGATK 119 (469)
T ss_pred ccccceEEEeeCCeEEEEECceeEEeeee----eeeecC-----CceEEEEeCCceeEEEEccccceEEEechhh
Confidence 33455554 6899999999999988642 233332 2456788887777778888888888998864
No 499
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=21.12 E-value=2.2e+02 Score=25.11 Aligned_cols=78 Identities=10% Similarity=0.130 Sum_probs=55.4
Q ss_pred CCceEEEeeeC-CE-EEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCC-------------
Q psy16020 62 HHSVRSLAAVY-NK-VWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDS------------- 125 (151)
Q Consensus 62 ~~pV~~m~~v~-~~-Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~------------- 125 (151)
.-|++...... ++ |...-.-.|.+|+..++..+.+|. |+ .|..+-+++.+- +.+-.+-+
T Consensus 32 ~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~~l~~~~-~~----~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~ 106 (561)
T COG5354 32 NWPVAYVSESPLGTYLFSEHAAGVECWGGPSKAKLVRFR-HP----DVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTS 106 (561)
T ss_pred CcchhheeecCcchheehhhccceEEccccchhheeeee-cC----CceecccCcccceeeeeccCCccChhhccCCccc
Confidence 47887777765 34 333334579999999988777777 64 678888887766 44444444
Q ss_pred --eEEEEeCCccceeeeEeCC
Q psy16020 126 --TLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 126 --~l~lwd~~t~~~l~~idi~ 144 (151)
.+.+||..++..+..++.-
T Consensus 107 ~n~~~vwd~~sg~iv~sf~~~ 127 (561)
T COG5354 107 KNNVFVWDIASGMIVFSFNGI 127 (561)
T ss_pred cCceeEEeccCceeEeecccc
Confidence 4899999999988877643
No 500
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=21.06 E-value=5.3e+02 Score=22.01 Aligned_cols=63 Identities=10% Similarity=0.075 Sum_probs=41.6
Q ss_pred CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce
Q psy16020 72 YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 72 ~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
++.+.=-+.+.|+++|.++.+....+.... +..|.+-...+..+.++..+.. +..+.......
T Consensus 418 ~~~ivQVt~~~i~l~~~~~~~~~~~w~~~~--~~~I~~a~~~~~~v~v~~~~~~-~~~~~~~~~~~ 480 (504)
T PF10433_consen 418 DGRIVQVTPKGIRLIDLEDGKLTQEWKPPA--GSIIVAASINDPQVLVALSGGE-LVYFELDDNKI 480 (504)
T ss_dssp TTEEEEEESSEEEEEESSSTSEEEEEE-TT--S---SEEEESSSEEEEEE-TTE-EEEEEEETTEE
T ss_pred CCeEEEEecCeEEEEECCCCeEEEEEeCCC--CCeEEEEEECCCEEEEEEeCCc-EEEEEEECCce
Confidence 677777778899999999999888887553 3577777777777777776444 55555554333
Done!