Query psy16020
Match_columns 151
No_of_seqs 106 out of 329
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 18:53:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 99.5 6.9E-13 2.4E-17 105.9 17.6 127 11-143 78-210 (344)
2 1p22_A F-BOX/WD-repeat protein 99.4 1.8E-11 6.1E-16 99.2 20.3 130 4-142 201-333 (435)
3 2ovr_B FBW7, F-BOX/WD repeat p 99.4 2.4E-11 8.2E-16 98.4 19.1 128 4-142 147-276 (445)
4 2ynn_A Coatomer subunit beta'; 99.4 1.9E-11 6.4E-16 94.9 17.2 113 14-136 12-130 (304)
5 3frx_A Guanine nucleotide-bind 99.4 4.9E-11 1.7E-15 93.3 19.1 133 4-147 95-240 (319)
6 3ow8_A WD repeat-containing pr 99.4 3.2E-11 1.1E-15 94.7 17.7 127 5-141 153-286 (321)
7 2ovr_B FBW7, F-BOX/WD repeat p 99.4 6.2E-11 2.1E-15 96.0 19.4 129 5-141 268-398 (445)
8 4gqb_B Methylosome protein 50; 99.4 1.9E-11 6.5E-16 97.5 15.8 130 3-140 156-295 (344)
9 1got_B GT-beta; complex (GTP-b 99.4 9.1E-11 3.1E-15 92.3 19.2 133 4-142 85-223 (340)
10 4g56_B MGC81050 protein; prote 99.4 1.6E-11 5.6E-16 97.8 15.1 126 12-143 91-222 (357)
11 3odt_A Protein DOA1; ubiquitin 99.4 4.7E-11 1.6E-15 90.8 16.9 131 7-147 174-309 (313)
12 3k26_A Polycomb protein EED; W 99.4 5.6E-11 1.9E-15 92.1 17.4 130 7-141 8-154 (366)
13 3odt_A Protein DOA1; ubiquitin 99.4 1.5E-10 5E-15 88.0 19.3 126 7-144 133-265 (313)
14 1vyh_C Platelet-activating fac 99.4 4.5E-11 1.5E-15 96.7 17.1 129 3-141 137-272 (410)
15 2ynn_A Coatomer subunit beta'; 99.4 1.1E-10 3.8E-15 90.5 18.7 120 15-143 140-268 (304)
16 1p22_A F-BOX/WD-repeat protein 99.4 8.4E-11 2.9E-15 95.2 18.5 128 4-142 161-293 (435)
17 4g56_B MGC81050 protein; prote 99.4 1.5E-11 5.1E-16 98.0 13.8 131 3-141 168-308 (357)
18 1vyh_C Platelet-activating fac 99.4 1.3E-10 4.5E-15 94.0 19.3 129 4-142 222-377 (410)
19 3vu4_A KMHSV2; beta-propeller 99.3 1E-10 3.6E-15 92.9 18.0 130 3-136 88-273 (355)
20 3ow8_A WD repeat-containing pr 99.3 8.3E-11 2.8E-15 92.4 17.1 128 4-141 110-244 (321)
21 4ery_A WD repeat-containing pr 99.3 2.9E-10 9.8E-15 87.6 19.2 126 7-142 14-146 (312)
22 3mmy_A MRNA export factor; mRN 99.3 2.6E-10 8.9E-15 88.2 19.0 129 8-145 31-171 (368)
23 1gxr_A ESG1, transducin-like e 99.3 2.9E-10 9.9E-15 87.0 18.9 127 14-148 96-228 (337)
24 4aez_A CDC20, WD repeat-contai 99.3 3.1E-10 1.1E-14 90.9 19.4 136 4-148 164-307 (401)
25 3v7d_B Cell division control p 99.3 1.7E-10 6E-15 93.3 17.8 136 4-142 191-349 (464)
26 3f3f_A Nucleoporin SEH1; struc 99.3 1.3E-10 4.3E-15 88.6 15.7 124 14-143 10-152 (351)
27 2xzm_R RACK1; ribosome, transl 99.3 3.2E-10 1.1E-14 89.1 18.5 125 7-134 12-149 (343)
28 4ery_A WD repeat-containing pr 99.3 3.2E-10 1.1E-14 87.4 17.9 127 5-141 54-187 (312)
29 2aq5_A Coronin-1A; WD40 repeat 99.3 1.6E-10 5.4E-15 92.4 16.2 123 15-141 81-214 (402)
30 2hes_X YDR267CP; beta-propelle 99.3 3.2E-10 1.1E-14 88.9 17.5 124 4-133 2-137 (330)
31 3lrv_A PRE-mRNA-splicing facto 99.3 7.9E-11 2.7E-15 92.5 13.9 128 4-141 112-251 (343)
32 4aez_A CDC20, WD repeat-contai 99.3 7.2E-10 2.5E-14 88.8 19.6 130 3-142 120-256 (401)
33 3v7d_B Cell division control p 99.3 9.4E-10 3.2E-14 89.0 20.4 118 16-144 271-391 (464)
34 1sq9_A Antiviral protein SKI8; 99.3 3.4E-10 1.2E-14 89.2 17.2 123 4-136 215-397 (397)
35 2pbi_B Guanine nucleotide-bind 99.3 5.9E-10 2E-14 88.5 18.4 134 4-142 94-237 (354)
36 1yfq_A Cell cycle arrest prote 99.3 3.6E-10 1.2E-14 87.2 16.5 133 6-142 141-290 (342)
37 2pbi_B Guanine nucleotide-bind 99.3 5.1E-10 1.8E-14 88.8 17.7 122 10-141 148-278 (354)
38 4aow_A Guanine nucleotide-bind 99.3 2.3E-10 7.7E-15 88.1 15.1 122 4-136 203-339 (340)
39 3ei3_B DNA damage-binding prot 99.3 1E-09 3.5E-14 86.6 19.1 128 5-142 105-248 (383)
40 1got_B GT-beta; complex (GTP-b 99.3 1.3E-09 4.5E-14 85.7 19.5 125 8-142 47-181 (340)
41 3gre_A Serine/threonine-protei 99.2 4.6E-10 1.6E-14 90.2 17.0 134 3-142 199-367 (437)
42 3k26_A Polycomb protein EED; W 99.2 1.7E-10 5.9E-15 89.3 13.3 116 16-141 70-199 (366)
43 1r5m_A SIR4-interacting protei 99.2 6.1E-10 2.1E-14 87.7 16.4 130 4-143 179-328 (425)
44 3frx_A Guanine nucleotide-bind 99.2 5E-10 1.7E-14 87.5 15.7 124 10-140 11-143 (319)
45 1erj_A Transcriptional repress 99.2 1E-09 3.4E-14 88.1 17.6 134 10-146 59-208 (393)
46 1gxr_A ESG1, transducin-like e 99.2 2.1E-09 7.3E-14 82.2 18.5 129 8-142 44-180 (337)
47 3vl1_A 26S proteasome regulato 99.2 2.6E-09 8.9E-14 84.9 19.6 132 4-142 127-286 (420)
48 4h5i_A Guanine nucleotide-exch 99.2 5.3E-10 1.8E-14 89.3 15.6 127 4-133 165-342 (365)
49 3jrp_A Fusion protein of prote 99.2 6E-10 2E-14 86.6 15.5 124 8-139 3-139 (379)
50 2vdu_B TRNA (guanine-N(7)-)-me 99.2 6.2E-10 2.1E-14 90.6 15.9 134 5-144 136-281 (450)
51 3vl1_A 26S proteasome regulato 99.2 4.3E-10 1.5E-14 89.4 14.6 108 25-143 109-221 (420)
52 4ggc_A P55CDC, cell division c 99.2 1.3E-09 4.3E-14 83.1 16.7 119 16-137 151-318 (318)
53 3zwl_B Eukaryotic translation 99.2 3.3E-09 1.1E-13 81.9 19.2 142 3-147 103-262 (369)
54 3i2n_A WD repeat-containing pr 99.2 5.7E-10 2E-14 86.2 14.8 130 4-138 198-357 (357)
55 2pm7_B Protein transport prote 99.2 9.8E-10 3.3E-14 84.9 16.0 120 8-135 91-239 (297)
56 1pgu_A Actin interacting prote 99.2 7.2E-10 2.5E-14 91.8 16.2 128 5-141 436-580 (615)
57 1nr0_A Actin interacting prote 99.2 1.3E-09 4.5E-14 92.4 18.1 119 16-144 148-280 (611)
58 2ymu_A WD-40 repeat protein; u 99.2 2.4E-09 8.2E-14 88.6 18.8 124 6-142 416-546 (577)
59 3f3f_A Nucleoporin SEH1; struc 99.2 2.2E-09 7.6E-14 81.6 17.1 133 7-142 101-345 (351)
60 3gre_A Serine/threonine-protei 99.2 1.6E-09 5.4E-14 87.0 17.0 133 8-143 104-254 (437)
61 1sq9_A Antiviral protein SKI8; 99.2 9.9E-10 3.4E-14 86.5 15.6 120 15-142 186-330 (397)
62 1erj_A Transcriptional repress 99.2 1.4E-09 4.7E-14 87.3 16.5 131 4-142 195-349 (393)
63 1yfq_A Cell cycle arrest prote 99.2 6.9E-10 2.3E-14 85.6 13.7 119 16-142 12-148 (342)
64 2hes_X YDR267CP; beta-propelle 99.2 1.6E-09 5.4E-14 85.0 15.9 124 15-141 58-193 (330)
65 3dm0_A Maltose-binding peripla 99.2 1.4E-09 4.9E-14 93.2 16.4 132 4-146 460-604 (694)
66 1k8k_C P40, ARP2/3 complex 41 99.2 3.4E-09 1.2E-13 82.5 17.2 125 14-144 95-243 (372)
67 1r5m_A SIR4-interacting protei 99.2 2.4E-09 8.3E-14 84.2 16.5 122 5-136 236-363 (425)
68 3jrp_A Fusion protein of prote 99.1 3.4E-09 1.2E-13 82.3 17.0 123 6-136 45-193 (379)
69 1pgu_A Actin interacting prote 99.1 5.3E-09 1.8E-13 86.5 18.8 129 6-144 150-293 (615)
70 2xzm_R RACK1; ribosome, transl 99.1 1E-08 3.5E-13 80.5 19.5 126 4-141 106-252 (343)
71 2pm7_B Protein transport prote 99.1 3.7E-09 1.3E-13 81.6 15.8 114 15-136 9-134 (297)
72 1l0q_A Surface layer protein; 99.1 1.4E-08 4.8E-13 80.0 19.4 131 3-145 61-200 (391)
73 3lrv_A PRE-mRNA-splicing facto 99.1 7.1E-10 2.4E-14 87.1 11.9 133 6-143 68-211 (343)
74 1l0q_A Surface layer protein; 99.1 1.7E-08 5.7E-13 79.6 19.8 131 3-145 19-158 (391)
75 3dm0_A Maltose-binding peripla 99.1 4.7E-09 1.6E-13 89.9 17.8 120 10-134 376-503 (694)
76 2aq5_A Coronin-1A; WD40 repeat 99.1 6.3E-09 2.2E-13 83.0 17.4 122 7-137 122-257 (402)
77 3sfz_A APAF-1, apoptotic pepti 99.1 5.1E-09 1.7E-13 94.4 18.6 118 15-142 615-740 (1249)
78 3ei3_B DNA damage-binding prot 99.1 1.2E-08 4E-13 80.5 18.5 130 6-142 63-201 (383)
79 2pm9_A Protein WEB1, protein t 99.1 1.8E-09 6.3E-14 85.3 13.8 129 4-140 196-343 (416)
80 3nok_A Glutaminyl cyclase; bet 99.1 7.4E-09 2.5E-13 81.1 16.8 135 2-145 81-221 (268)
81 2j04_B YDR362CP, TAU91; beta p 99.1 2.6E-09 8.9E-14 90.3 15.3 122 16-141 208-349 (524)
82 3mkq_A Coatomer beta'-subunit; 99.1 6.2E-09 2.1E-13 89.5 17.8 118 14-141 12-136 (814)
83 4gga_A P55CDC, cell division c 99.1 5.3E-09 1.8E-13 84.3 15.9 116 15-141 276-402 (420)
84 3zwl_B Eukaryotic translation 99.1 6.8E-09 2.3E-13 80.2 16.0 126 6-142 208-354 (369)
85 3fm0_A Protein CIAO1; WDR39,SG 99.1 4.7E-09 1.6E-13 82.7 15.2 125 5-136 4-138 (345)
86 2ymu_A WD-40 repeat protein; u 99.1 6.2E-09 2.1E-13 86.1 16.4 114 6-131 457-577 (577)
87 2xyi_A Probable histone-bindin 99.1 6.2E-09 2.1E-13 84.4 16.1 132 6-142 171-318 (430)
88 2oaj_A Protein SNI1; WD40 repe 99.1 3.3E-09 1.1E-13 94.6 15.5 133 3-140 86-248 (902)
89 3nol_A Glutamine cyclotransfer 99.1 1.9E-08 6.3E-13 78.6 17.9 136 2-145 71-212 (262)
90 3mbr_X Glutamine cyclotransfer 99.1 2.1E-08 7.2E-13 77.6 18.0 135 3-145 50-190 (243)
91 3sfz_A APAF-1, apoptotic pepti 99.1 8.2E-09 2.8E-13 93.0 18.0 132 3-144 644-784 (1249)
92 3iz6_a 40S ribosomal protein R 99.1 3.3E-09 1.1E-13 84.7 13.7 121 16-144 158-290 (380)
93 3bg1_A Protein SEC13 homolog; 99.1 3E-09 1E-13 82.9 13.1 113 15-135 13-137 (316)
94 1k8k_C P40, ARP2/3 complex 41 99.1 7.2E-09 2.5E-13 80.6 15.0 117 15-134 142-274 (372)
95 4aow_A Guanine nucleotide-bind 99.0 2.2E-08 7.6E-13 76.8 17.4 116 16-142 172-294 (340)
96 4a11_B DNA excision repair pro 99.0 3.9E-09 1.3E-13 82.8 13.1 124 15-143 245-374 (408)
97 4a11_B DNA excision repair pro 99.0 8.6E-09 2.9E-13 80.8 15.0 112 14-136 98-220 (408)
98 3dw8_B Serine/threonine-protei 99.0 2.3E-09 8E-14 85.7 11.9 119 16-137 94-261 (447)
99 3iz6_a 40S ribosomal protein R 99.0 1.9E-08 6.6E-13 80.2 17.2 120 16-141 206-336 (380)
100 1nr0_A Actin interacting prote 99.0 1.5E-08 5.3E-13 85.8 17.5 133 6-141 49-228 (611)
101 4e54_B DNA damage-binding prot 99.0 5.7E-09 2E-13 84.6 14.2 113 16-134 120-240 (435)
102 3mmy_A MRNA export factor; mRN 99.0 7.8E-09 2.7E-13 79.8 14.1 134 3-142 158-312 (368)
103 3mkq_A Coatomer beta'-subunit; 99.0 2.7E-08 9.3E-13 85.5 18.6 131 3-143 42-181 (814)
104 2pm9_A Protein WEB1, protein t 99.0 4.7E-09 1.6E-13 83.0 12.9 121 14-142 164-302 (416)
105 3i2n_A WD repeat-containing pr 99.0 2.8E-08 9.5E-13 76.6 16.8 129 13-147 63-212 (357)
106 3dwl_C Actin-related protein 2 99.0 2.5E-09 8.5E-14 84.0 11.0 120 7-133 46-176 (377)
107 3fm0_A Protein CIAO1; WDR39,SG 99.0 2.4E-08 8.3E-13 78.6 15.9 114 15-136 61-183 (345)
108 4ggc_A P55CDC, cell division c 99.0 9.1E-08 3.1E-12 72.7 18.4 109 19-136 29-140 (318)
109 3dwl_C Actin-related protein 2 99.0 3.2E-09 1.1E-13 83.4 10.5 122 14-142 99-248 (377)
110 3jro_A Fusion protein of prote 99.0 1.1E-08 3.8E-13 89.0 14.4 115 15-137 9-135 (753)
111 3bws_A Protein LP49; two-domai 99.0 2.1E-08 7.2E-13 80.0 14.9 130 7-144 114-253 (433)
112 3bg1_A Protein SEC13 homolog; 99.0 3.4E-09 1.2E-13 82.6 10.0 120 8-134 95-247 (316)
113 2vdu_B TRNA (guanine-N(7)-)-me 99.0 7.6E-08 2.6E-12 78.1 18.2 124 15-144 195-354 (450)
114 2xyi_A Probable histone-bindin 99.0 2.6E-08 8.8E-13 80.7 15.2 128 9-141 122-273 (430)
115 3dsm_A Uncharacterized protein 98.9 1.9E-07 6.5E-12 73.5 19.5 125 14-146 42-173 (328)
116 3vu4_A KMHSV2; beta-propeller 98.9 1.7E-08 5.8E-13 80.1 13.5 114 18-142 63-235 (355)
117 4e54_B DNA damage-binding prot 98.9 8.5E-09 2.9E-13 83.6 11.5 117 15-141 164-289 (435)
118 3dsm_A Uncharacterized protein 98.9 7.4E-08 2.5E-12 75.8 16.6 132 3-143 71-221 (328)
119 4gga_A P55CDC, cell division c 98.9 8.1E-08 2.8E-12 77.3 17.0 106 21-136 111-220 (420)
120 3bws_A Protein LP49; two-domai 98.9 2.6E-07 9E-12 73.6 19.8 131 4-146 199-346 (433)
121 3jro_A Fusion protein of prote 98.9 3.6E-08 1.2E-12 85.9 15.7 121 8-136 91-240 (753)
122 2oaj_A Protein SNI1; WD40 repe 98.9 3.1E-08 1.1E-12 88.3 15.3 126 6-143 49-191 (902)
123 2j04_B YDR362CP, TAU91; beta p 98.9 2.5E-08 8.6E-13 84.2 14.0 118 16-141 267-393 (524)
124 3mbr_X Glutamine cyclotransfer 98.9 3.2E-07 1.1E-11 70.9 18.9 130 3-144 6-143 (243)
125 1nir_A Nitrite reductase; hemo 98.9 2.6E-07 8.8E-12 78.1 19.6 137 3-145 166-324 (543)
126 3dw8_B Serine/threonine-protei 98.9 2.9E-08 9.8E-13 79.3 12.4 123 14-139 225-378 (447)
127 4gq1_A NUP37; propeller, trans 98.9 6.1E-08 2.1E-12 77.8 14.2 109 27-141 103-225 (393)
128 2iwa_A Glutamine cyclotransfer 98.8 4E-07 1.4E-11 71.2 17.9 135 3-144 51-191 (266)
129 2w18_A PALB2, fancn, partner a 98.8 1.2E-07 4.2E-12 76.9 15.4 56 75-132 298-355 (356)
130 3vgz_A Uncharacterized protein 98.8 3.4E-07 1.2E-11 70.6 17.4 132 4-145 172-314 (353)
131 2iwa_A Glutamine cyclotransfer 98.8 4.2E-07 1.4E-11 71.0 17.5 131 4-144 7-145 (266)
132 3vgz_A Uncharacterized protein 98.8 4.8E-07 1.6E-11 69.8 17.5 133 3-143 76-224 (353)
133 1nir_A Nitrite reductase; hemo 98.8 1.6E-07 5.4E-12 79.4 15.1 135 4-142 354-522 (543)
134 2w18_A PALB2, fancn, partner a 98.8 2.9E-07 1E-11 74.7 15.4 104 34-141 156-276 (356)
135 3nok_A Glutaminyl cyclase; bet 98.8 8.9E-07 3E-11 69.3 17.1 126 7-145 44-175 (268)
136 3nol_A Glutamine cyclotransfer 98.8 4.4E-07 1.5E-11 70.8 15.3 128 5-144 30-165 (262)
137 2j04_A TAU60, YPL007P, hypothe 98.8 2.7E-07 9.2E-12 79.3 15.2 111 15-137 85-214 (588)
138 2oit_A Nucleoporin 214KDA; NH2 98.7 9.5E-08 3.3E-12 78.5 11.7 128 11-142 88-230 (434)
139 4h5i_A Guanine nucleotide-exch 98.7 4E-07 1.4E-11 72.5 14.5 137 11-147 10-179 (365)
140 2j04_A TAU60, YPL007P, hypothe 98.7 1.1E-06 3.9E-11 75.4 17.1 113 17-137 131-257 (588)
141 3q7m_A Lipoprotein YFGL, BAMB; 98.6 5.8E-06 2E-10 65.3 18.1 137 5-145 27-173 (376)
142 1pby_B Quinohemoprotein amine 98.6 2.4E-06 8.2E-11 65.1 14.8 131 3-145 18-174 (337)
143 3u4y_A Uncharacterized protein 98.6 3.7E-06 1.3E-10 64.5 15.6 130 4-141 116-261 (331)
144 1xip_A Nucleoporin NUP159; bet 98.5 1.1E-05 3.7E-10 66.1 18.2 118 9-143 82-202 (388)
145 3q7m_A Lipoprotein YFGL, BAMB; 98.5 7.9E-06 2.7E-10 64.5 16.9 133 3-144 70-217 (376)
146 1qks_A Cytochrome CD1 nitrite 98.5 1.9E-05 6.4E-10 67.4 19.6 135 3-143 184-382 (567)
147 2oit_A Nucleoporin 214KDA; NH2 98.5 2.5E-06 8.7E-11 69.9 13.5 113 15-135 149-279 (434)
148 3u4y_A Uncharacterized protein 98.5 1.9E-05 6.7E-10 60.4 17.5 119 4-134 28-160 (331)
149 4gq1_A NUP37; propeller, trans 98.4 2.8E-06 9.5E-11 68.1 12.4 119 16-141 137-293 (393)
150 1ri6_A Putative isomerase YBHE 98.4 1.7E-05 5.8E-10 60.5 15.8 134 7-143 120-275 (343)
151 1pby_B Quinohemoprotein amine 98.4 1.1E-05 3.6E-10 61.5 14.0 114 26-144 2-134 (337)
152 1jmx_B Amine dehydrogenase; ox 98.4 7.8E-06 2.7E-10 62.6 13.3 131 3-144 28-185 (349)
153 1jmx_B Amine dehydrogenase; ox 98.4 5.6E-06 1.9E-10 63.5 11.8 91 4-100 73-185 (349)
154 3sjl_D Methylamine dehydrogena 98.3 1.4E-05 4.8E-10 65.4 13.7 112 24-144 43-179 (386)
155 1ri6_A Putative isomerase YBHE 98.3 1.4E-05 4.8E-10 60.9 13.0 111 26-145 5-129 (343)
156 2oiz_A Aromatic amine dehydrog 98.2 1.2E-05 4E-10 64.1 11.0 110 25-143 15-150 (361)
157 3hfq_A Uncharacterized protein 98.1 0.00046 1.6E-08 53.3 17.8 117 15-133 85-217 (347)
158 1kb0_A Quinohemoprotein alcoho 98.1 6.2E-05 2.1E-09 65.2 13.8 142 4-145 53-210 (677)
159 3hxj_A Pyrrolo-quinoline quino 98.1 5.8E-05 2E-09 57.7 12.2 123 6-143 126-252 (330)
160 3c75_H MADH, methylamine dehyd 98.1 6.7E-05 2.3E-09 62.1 12.8 112 24-144 83-219 (426)
161 1qks_A Cytochrome CD1 nitrite 98.0 0.00029 1E-08 60.0 16.1 108 25-144 166-285 (567)
162 2mad_H Methylamine dehydrogena 98.0 0.0002 7E-09 57.6 14.2 66 72-141 278-357 (373)
163 3hxj_A Pyrrolo-quinoline quino 98.0 0.00013 4.4E-09 55.8 12.2 119 5-136 203-326 (330)
164 2oiz_A Aromatic amine dehydrog 98.0 2.6E-05 8.9E-10 62.1 8.5 68 68-141 259-343 (361)
165 3scy_A Hypothetical bacterial 98.0 0.001 3.6E-08 51.6 17.6 124 18-142 157-303 (361)
166 3hfq_A Uncharacterized protein 98.0 0.0009 3.1E-08 51.6 17.0 117 17-138 188-323 (347)
167 3scy_A Hypothetical bacterial 97.9 0.0024 8.4E-08 49.5 19.2 124 16-142 100-252 (361)
168 1q7f_A NHL, brain tumor CG1071 97.9 0.0017 5.9E-08 48.7 17.7 128 6-142 109-245 (286)
169 1yiq_A Quinohemoprotein alcoho 97.9 0.0003 1E-08 61.0 15.0 140 5-144 47-202 (689)
170 2hqs_A Protein TOLB; TOLB, PAL 97.9 0.00032 1.1E-08 56.7 14.1 92 35-138 159-260 (415)
171 1q7f_A NHL, brain tumor CG1071 97.9 0.0019 6.4E-08 48.5 17.6 120 7-137 152-283 (286)
172 3fvz_A Peptidyl-glycine alpha- 97.9 0.0013 4.3E-08 51.2 17.0 112 18-134 198-322 (329)
173 1kv9_A Type II quinohemoprotei 97.9 0.00029 9.8E-09 60.9 14.4 140 5-144 43-197 (668)
174 3sjl_D Methylamine dehydrogena 97.9 0.00034 1.2E-08 57.2 13.5 75 72-150 291-379 (386)
175 2ad6_A Methanol dehydrogenase 97.9 0.0006 2.1E-08 57.9 15.5 142 5-146 39-197 (571)
176 2mad_H Methylamine dehydrogena 97.8 0.00096 3.3E-08 53.6 14.3 111 24-144 31-167 (373)
177 2dg1_A DRP35, lactonase; beta 97.8 0.0023 8E-08 48.9 16.0 110 15-134 86-213 (333)
178 1xip_A Nucleoporin NUP159; bet 97.8 0.00047 1.6E-08 56.3 12.5 113 17-138 39-159 (388)
179 1kb0_A Quinohemoprotein alcoho 97.7 0.002 6.8E-08 55.8 17.0 137 3-145 145-357 (677)
180 2qc5_A Streptogramin B lactona 97.7 0.0067 2.3E-07 45.1 18.0 121 6-137 7-136 (300)
181 1pjx_A Dfpase, DIISOPROPYLFLUO 97.7 0.00099 3.4E-08 50.3 13.4 112 18-134 174-299 (314)
182 2hqs_A Protein TOLB; TOLB, PAL 97.7 0.001 3.5E-08 53.6 14.2 122 5-138 212-348 (415)
183 2ojh_A Uncharacterized protein 97.7 0.0015 5.3E-08 47.9 14.1 119 5-133 31-159 (297)
184 2hz6_A Endoplasmic reticulum t 97.7 8E-06 2.7E-10 65.5 1.5 129 3-143 26-158 (369)
185 2z2n_A Virginiamycin B lyase; 97.7 0.0032 1.1E-07 46.9 15.7 118 9-137 5-131 (299)
186 2z2n_A Virginiamycin B lyase; 97.7 0.0048 1.6E-07 45.8 16.5 112 16-138 57-174 (299)
187 3c75_H MADH, methylamine dehyd 97.7 0.00096 3.3E-08 55.1 13.6 66 72-141 330-409 (426)
188 1mda_H Methylamine dehydrogena 97.7 0.00026 8.9E-09 57.3 10.0 108 24-143 30-164 (368)
189 3fvz_A Peptidyl-glycine alpha- 97.7 0.0067 2.3E-07 47.0 17.8 119 17-142 144-285 (329)
190 2qc5_A Streptogramin B lactona 97.7 0.0073 2.5E-07 44.9 17.2 118 10-138 53-179 (300)
191 1rwi_B Serine/threonine-protei 97.6 0.00097 3.3E-08 49.4 11.9 112 17-139 151-269 (270)
192 2ecf_A Dipeptidyl peptidase IV 97.6 0.00037 1.3E-08 59.4 10.5 116 16-140 37-187 (741)
193 1mda_H Methylamine dehydrogena 97.6 0.0009 3.1E-08 54.2 12.3 71 71-145 274-357 (368)
194 1flg_A Protein (quinoprotein e 97.6 0.0022 7.7E-08 54.6 15.1 134 4-143 42-202 (582)
195 3ott_A Two-component system se 97.6 0.0017 5.9E-08 56.1 14.4 110 14-136 19-132 (758)
196 2hz6_A Endoplasmic reticulum t 97.6 2.7E-05 9.3E-10 62.3 2.8 128 5-147 68-205 (369)
197 2qe8_A Uncharacterized protein 97.6 0.017 5.7E-07 45.1 18.7 116 16-141 17-161 (343)
198 1rwi_B Serine/threonine-protei 97.5 0.002 7E-08 47.6 12.4 111 16-136 108-224 (270)
199 2ad6_A Methanol dehydrogenase 97.5 0.0097 3.3E-07 50.5 17.9 142 3-145 132-346 (571)
200 4a2l_A BT_4663, two-component 97.5 0.00038 1.3E-08 60.6 9.3 111 14-136 40-161 (795)
201 3no2_A Uncharacterized protein 97.5 0.00095 3.2E-08 51.3 10.6 127 5-142 64-203 (276)
202 1w6s_A Methanol dehydrogenase 97.5 0.011 3.9E-07 50.6 17.8 143 3-145 138-353 (599)
203 3no2_A Uncharacterized protein 97.5 0.0025 8.7E-08 48.8 12.4 109 26-144 6-117 (276)
204 1jof_A Carboxy-CIS,CIS-muconat 97.5 0.013 4.6E-07 45.8 16.7 100 33-137 117-229 (365)
205 1w6s_A Methanol dehydrogenase 97.5 0.0028 9.6E-08 54.4 13.7 142 5-146 39-203 (599)
206 2ece_A 462AA long hypothetical 97.4 0.0013 4.4E-08 55.0 11.1 136 6-144 58-247 (462)
207 2ojh_A Uncharacterized protein 97.4 0.0036 1.2E-07 45.9 12.6 118 11-138 124-262 (297)
208 3v9f_A Two-component system se 97.4 0.0017 5.7E-08 56.5 12.1 113 16-135 407-525 (781)
209 3g4e_A Regucalcin; six bladed 97.4 0.004 1.4E-07 47.5 12.7 101 19-124 152-263 (297)
210 1yiq_A Quinohemoprotein alcoho 97.3 0.0095 3.2E-07 51.6 15.7 136 3-144 87-294 (689)
211 2z3z_A Dipeptidyl aminopeptida 97.3 0.00079 2.7E-08 57.1 8.3 115 17-140 27-161 (706)
212 1kv9_A Type II quinohemoprotei 97.3 0.013 4.3E-07 50.6 15.6 136 3-144 83-289 (668)
213 1npe_A Nidogen, entactin; glyc 97.3 0.033 1.1E-06 41.5 19.0 117 17-144 123-248 (267)
214 4a2l_A BT_4663, two-component 97.3 0.0024 8.3E-08 55.5 11.2 114 16-137 406-529 (795)
215 2z3z_A Dipeptidyl aminopeptida 97.3 0.0012 4.1E-08 56.0 9.1 115 16-138 82-248 (706)
216 3v9f_A Two-component system se 97.3 0.0032 1.1E-07 54.6 11.9 114 16-137 363-481 (781)
217 2dg1_A DRP35, lactonase; beta 97.2 0.012 4E-07 45.0 13.8 112 17-136 46-173 (333)
218 1pjx_A Dfpase, DIISOPROPYLFLUO 97.2 0.036 1.2E-06 41.6 15.7 106 16-133 71-206 (314)
219 2ghs_A AGR_C_1268P; regucalcin 97.1 0.042 1.4E-06 42.5 16.3 112 9-133 83-209 (326)
220 3ott_A Two-component system se 97.1 0.0086 3E-07 51.7 13.1 110 16-136 63-176 (758)
221 1k32_A Tricorn protease; prote 97.1 0.013 4.6E-07 52.4 14.6 109 17-136 339-463 (1045)
222 3g4e_A Regucalcin; six bladed 97.1 0.023 7.9E-07 43.2 14.0 121 17-144 99-239 (297)
223 3e5z_A Putative gluconolactona 97.0 0.011 3.7E-07 44.6 11.7 110 17-136 173-288 (296)
224 1xfd_A DIP, dipeptidyl aminope 97.0 0.00095 3.2E-08 56.6 5.9 118 16-141 17-150 (723)
225 2be1_A Serine/threonine-protei 97.0 0.0025 8.4E-08 51.2 7.8 115 25-145 10-141 (339)
226 1xfd_A DIP, dipeptidyl aminope 97.0 0.0054 1.8E-07 51.9 10.3 118 18-141 63-244 (723)
227 1jof_A Carboxy-CIS,CIS-muconat 96.9 0.098 3.4E-06 40.7 16.8 127 16-146 193-355 (365)
228 2ghs_A AGR_C_1268P; regucalcin 96.9 0.059 2E-06 41.7 15.0 103 20-131 53-167 (326)
229 1flg_A Protein (quinoprotein e 96.8 0.053 1.8E-06 46.1 15.4 90 3-98 85-201 (582)
230 1z68_A Fibroblast activation p 96.8 0.0022 7.4E-08 54.6 6.5 108 20-139 20-144 (719)
231 2ecf_A Dipeptidyl peptidase IV 96.7 0.01 3.4E-07 50.5 9.8 94 18-117 111-221 (741)
232 4a5s_A Dipeptidyl peptidase 4 96.7 0.007 2.4E-07 52.2 8.8 112 17-139 18-146 (740)
233 3e5z_A Putative gluconolactona 96.5 0.072 2.5E-06 40.0 12.7 109 16-133 28-161 (296)
234 1k32_A Tricorn protease; prote 96.5 0.034 1.1E-06 49.8 12.2 112 17-141 297-416 (1045)
235 3hrp_A Uncharacterized protein 96.5 0.24 8.4E-06 39.8 16.3 114 16-137 219-357 (409)
236 3o4h_A Acylamino-acid-releasin 96.4 0.033 1.1E-06 46.1 11.3 106 19-138 115-231 (582)
237 3o4h_A Acylamino-acid-releasin 96.4 0.025 8.7E-07 46.8 10.1 76 57-138 189-278 (582)
238 3dr2_A Exported gluconolactona 96.4 0.039 1.3E-06 42.0 10.4 95 20-123 192-297 (305)
239 2ece_A 462AA long hypothetical 96.1 0.019 6.5E-07 47.9 8.0 72 72-143 95-182 (462)
240 3f7f_A Nucleoporin NUP120; nuc 96.0 0.0062 2.1E-07 53.5 4.6 98 16-143 162-259 (729)
241 4gq2_M Nucleoporin NUP120; bet 95.7 0.048 1.6E-06 49.1 9.4 96 24-145 180-277 (950)
242 2fp8_A Strictosidine synthase; 95.7 0.29 9.8E-06 37.4 12.7 108 17-134 81-216 (322)
243 3ei3_A DNA damage-binding prot 95.5 0.92 3.1E-05 41.8 17.1 121 4-133 815-956 (1158)
244 3amr_A 3-phytase; beta-propell 95.5 0.68 2.3E-05 37.3 14.3 116 27-145 145-275 (355)
245 2qe8_A Uncharacterized protein 95.4 0.67 2.3E-05 35.8 14.4 111 17-132 68-224 (343)
246 2fp8_A Strictosidine synthase; 95.4 0.62 2.1E-05 35.4 14.2 108 20-134 189-313 (322)
247 4fhn_B Nucleoporin NUP120; pro 95.1 0.038 1.3E-06 50.5 6.6 40 107-146 240-280 (1139)
248 1fwx_A Nitrous oxide reductase 94.7 0.2 6.8E-06 43.1 9.7 100 35-144 254-381 (595)
249 2be1_A Serine/threonine-protei 94.6 0.011 3.7E-07 47.5 1.6 94 2-100 26-140 (339)
250 1fwx_A Nitrous oxide reductase 94.6 0.56 1.9E-05 40.3 12.2 121 4-136 120-310 (595)
251 3hrp_A Uncharacterized protein 94.5 1.2 4E-05 35.7 13.5 110 17-136 132-251 (409)
252 1z68_A Fibroblast activation p 94.2 0.027 9.4E-07 47.7 3.2 65 73-137 27-102 (719)
253 2vpj_A Kelch-like protein 12; 94.2 1.3 4.4E-05 33.2 16.0 123 6-136 93-233 (301)
254 3azo_A Aminopeptidase; POP fam 94.2 0.8 2.7E-05 38.2 12.2 74 63-139 188-279 (662)
255 4a5s_A Dipeptidyl peptidase 4 94.2 0.097 3.3E-06 45.0 6.6 73 67-139 21-106 (740)
256 2gop_A Trilobed protease; beta 93.7 1.2 4E-05 33.6 11.5 67 64-137 218-294 (347)
257 1npe_A Nidogen, entactin; glyc 93.6 1.5 5.2E-05 32.2 12.9 102 27-134 3-110 (267)
258 3dr2_A Exported gluconolactona 93.6 1.1 3.6E-05 33.9 11.0 100 28-137 60-181 (305)
259 4asc_A Kelch repeat and BTB do 93.6 1.6 5.4E-05 33.1 12.0 112 17-136 140-279 (315)
260 2p4o_A Hypothetical protein; p 93.5 1.9 6.4E-05 32.6 16.3 120 4-134 20-147 (306)
261 2vpj_A Kelch-like protein 12; 93.3 1.9 6.4E-05 32.2 14.6 118 8-135 142-279 (301)
262 2xdw_A Prolyl endopeptidase; a 93.3 3 0.0001 35.4 14.4 107 24-136 296-416 (710)
263 2gop_A Trilobed protease; beta 93.3 0.38 1.3E-05 36.4 8.0 73 64-141 60-168 (347)
264 3amr_A 3-phytase; beta-propell 93.2 1.6 5.5E-05 35.1 11.7 126 5-133 169-328 (355)
265 3pe7_A Oligogalacturonate lyas 93.0 0.22 7.5E-06 38.3 6.4 67 72-141 47-118 (388)
266 3ii7_A Kelch-like protein 7; p 93.0 2.1 7.3E-05 32.0 15.1 108 18-135 142-273 (306)
267 1ijq_A LDL receptor, low-densi 93.0 2.4 8.1E-05 32.5 19.2 118 17-142 121-246 (316)
268 1zgk_A Kelch-like ECH-associat 92.9 2.3 7.9E-05 32.1 12.9 110 19-136 162-289 (308)
269 2xn4_A Kelch-like protein 2; s 92.9 2.3 7.7E-05 31.9 14.1 109 18-136 148-278 (302)
270 2woz_A Kelch repeat and BTB do 92.7 2.5 8.5E-05 32.0 12.9 109 20-136 153-289 (318)
271 1zgk_A Kelch-like ECH-associat 92.7 2.5 8.4E-05 31.9 12.5 110 19-136 64-195 (308)
272 2bkl_A Prolyl endopeptidase; m 92.5 4.4 0.00015 34.3 14.4 78 64-142 273-358 (695)
273 3ei3_A DNA damage-binding prot 92.4 6.6 0.00023 36.1 18.7 136 7-150 877-1025(1158)
274 3pe7_A Oligogalacturonate lyas 91.8 3.4 0.00012 31.4 14.9 52 81-136 168-227 (388)
275 3kya_A Putative phosphatase; s 91.6 5.4 0.00018 33.4 14.3 104 25-132 204-339 (496)
276 3v65_B Low-density lipoprotein 91.5 4.3 0.00015 32.1 16.5 116 17-142 203-326 (386)
277 3b7f_A Glycosyl hydrolase, BNR 91.4 2.4 8.1E-05 33.3 10.8 97 25-128 22-142 (394)
278 3azo_A Aminopeptidase; POP fam 91.2 5.7 0.0002 32.9 14.2 69 65-137 296-372 (662)
279 2xbg_A YCF48-like protein; pho 90.7 1.7 6E-05 33.4 9.1 111 16-132 205-320 (327)
280 2xn4_A Kelch-like protein 2; s 90.3 4.5 0.00015 30.2 14.4 108 19-136 102-231 (302)
281 4asc_A Kelch repeat and BTB do 89.9 5 0.00017 30.2 12.4 109 19-135 92-222 (315)
282 3qqz_A Putative uncharacterize 89.8 5.3 0.00018 30.3 12.7 71 63-136 27-102 (255)
283 2p9w_A MAL S 1 allergenic prot 89.6 2.3 7.9E-05 33.9 9.1 74 72-145 24-123 (334)
284 2bkl_A Prolyl endopeptidase; m 89.6 5.7 0.00019 33.6 12.2 72 62-136 319-399 (695)
285 2xbg_A YCF48-like protein; pho 89.6 5.7 0.0002 30.4 12.8 111 16-131 36-149 (327)
286 2woz_A Kelch repeat and BTB do 89.4 5.5 0.00019 30.0 12.2 108 19-136 103-233 (318)
287 3c5m_A Oligogalacturonate lyas 89.4 5.7 0.00019 30.0 13.5 68 64-137 239-332 (396)
288 2p9w_A MAL S 1 allergenic prot 88.8 1.7 5.9E-05 34.6 7.8 118 10-133 4-167 (334)
289 1q47_A Semaphorin 3A; beta pro 88.6 1.8 6.2E-05 36.2 8.2 59 28-86 424-487 (495)
290 1k3i_A Galactose oxidase precu 88.4 11 0.00036 31.9 13.0 118 13-136 183-325 (656)
291 3c5m_A Oligogalacturonate lyas 87.9 1.3 4.3E-05 33.8 6.4 67 72-141 47-118 (396)
292 2uvk_A YJHT; unknown function, 87.3 8.2 0.00028 29.4 14.3 97 23-124 17-128 (357)
293 1yr2_A Prolyl oligopeptidase; 87.1 13 0.00045 31.6 14.2 71 70-142 325-402 (741)
294 2xdw_A Prolyl endopeptidase; a 86.7 13 0.00046 31.3 16.1 72 71-143 296-377 (710)
295 3ii7_A Kelch-like protein 7; p 86.5 8.3 0.00028 28.7 14.8 110 19-136 49-180 (306)
296 4hw6_A Hypothetical protein, I 85.5 13 0.00044 30.0 12.7 66 67-133 232-303 (433)
297 3tc9_A Hypothetical hydrolase; 85.2 13 0.00045 29.8 13.5 108 17-133 180-300 (430)
298 3q6k_A 43.2 kDa salivary prote 85.2 4 0.00014 33.0 8.2 124 18-141 28-197 (381)
299 3s9j_A Member of DUF4221 famil 85.1 2.8 9.5E-05 33.8 7.2 75 71-146 36-121 (369)
300 3v64_C Agrin; beta propeller, 84.3 13 0.00043 28.9 17.6 115 17-142 160-283 (349)
301 1yr2_A Prolyl oligopeptidase; 84.1 9.7 0.00033 32.5 10.6 105 24-136 326-443 (741)
302 2uvk_A YJHT; unknown function, 82.2 14 0.00049 28.0 14.0 109 18-132 58-224 (357)
303 1n7d_A LDL receptor, low-densi 81.1 3.4 0.00012 35.7 6.6 70 72-142 551-622 (699)
304 3sov_A LRP-6, low-density lipo 80.1 18 0.00061 27.7 18.2 116 17-142 123-246 (318)
305 4fww_A Macrophage-stimulating 78.1 9 0.00031 31.9 8.1 60 28-88 421-481 (527)
306 3nvx_A Protein A39; beta-prope 77.3 7.5 0.00026 31.5 7.0 67 62-133 10-79 (383)
307 3s94_A LRP-6, low-density lipo 76.9 33 0.0011 29.0 12.7 115 17-141 128-250 (619)
308 4gz8_A Semaphorin-3A; multi-do 75.4 11 0.00037 32.8 8.0 63 27-89 431-498 (667)
309 1t9f_A Protein 1D10; structura 74.7 8.3 0.00028 27.9 6.1 72 77-148 7-96 (187)
310 1tl2_A L10, protein (tachylect 74.0 16 0.00055 27.6 7.7 109 17-128 42-157 (236)
311 3p5b_L Low density lipoprotein 73.3 32 0.0011 27.1 19.3 117 18-142 204-328 (400)
312 3b7f_A Glycosyl hydrolase, BNR 70.6 35 0.0012 26.4 10.8 111 16-129 55-204 (394)
313 3nvq_A Semaphorin-7A; beta-pro 70.3 22 0.00074 30.5 8.6 61 27-88 382-446 (590)
314 3m0c_C LDL receptor, low-densi 67.9 63 0.0022 28.4 19.7 117 17-141 515-639 (791)
315 4hw6_A Hypothetical protein, I 66.0 49 0.0017 26.4 12.7 109 17-137 140-262 (433)
316 3iuj_A Prolyl endopeptidase; h 66.0 27 0.00092 29.5 8.4 54 82-135 209-269 (693)
317 3oky_A Plexin-A2; transmembran 65.6 22 0.00075 30.9 7.7 60 28-88 415-477 (681)
318 3q6k_A 43.2 kDa salivary prote 65.3 52 0.0018 26.4 12.0 128 7-134 136-306 (381)
319 3qqz_A Putative uncharacterize 64.4 43 0.0015 25.1 17.4 109 16-131 27-150 (255)
320 1k3i_A Galactose oxidase precu 64.2 20 0.00067 30.2 7.1 64 71-136 409-499 (656)
321 2zwa_A Leucine carboxyl methyl 63.9 35 0.0012 29.2 8.8 108 25-137 500-638 (695)
322 2ism_A Putative oxidoreductase 63.7 48 0.0017 25.5 10.0 101 17-122 32-153 (352)
323 2uzx_B Hepatocyte growth facto 62.5 12 0.0004 32.8 5.5 35 63-97 29-63 (727)
324 3al9_A Plexin-A2; beta-propell 62.1 13 0.00044 31.3 5.5 60 27-88 415-478 (539)
325 3ol2_B Plexin-B1; beta-propell 62.1 31 0.0011 29.0 7.8 60 27-89 402-464 (528)
326 2ism_A Putative oxidoreductase 61.8 42 0.0014 25.9 8.2 68 63-133 32-113 (352)
327 1olz_A Semaphorin 4D; developm 61.6 21 0.00071 30.9 6.9 57 27-86 417-477 (663)
328 2p4o_A Hypothetical protein; p 60.9 48 0.0016 24.5 19.2 120 9-134 65-198 (306)
329 1n7d_A LDL receptor, low-densi 58.9 14 0.00049 31.8 5.4 111 17-133 407-527 (699)
330 4a0p_A LRP6, LRP-6, low-densit 57.2 89 0.003 26.4 17.8 117 17-141 433-556 (628)
331 3v64_C Agrin; beta propeller, 56.2 66 0.0023 24.7 17.3 106 18-134 75-191 (349)
332 4a0p_A LRP6, LRP-6, low-densit 55.3 95 0.0033 26.2 19.0 114 17-142 124-245 (628)
333 3sre_A PON1, serum paraoxonase 55.0 76 0.0026 25.0 13.8 65 20-89 225-297 (355)
334 3mal_A Stromal cell-derived fa 52.1 39 0.0013 24.6 6.1 73 76-148 17-107 (199)
335 2zwa_A Leucine carboxyl methyl 50.1 1.2E+02 0.0041 25.8 12.3 105 24-136 396-524 (695)
336 3oky_B Putative uncharacterize 46.9 71 0.0024 27.1 7.6 62 27-88 422-497 (565)
337 3a9g_A Putative uncharacterize 46.8 97 0.0033 23.9 9.0 65 66-133 32-113 (354)
338 3iuj_A Prolyl endopeptidase; h 45.6 1.3E+02 0.0046 25.1 16.3 69 70-142 289-366 (693)
339 4gz8_A Semaphorin-3A; multi-do 45.5 1.5E+02 0.0051 25.6 9.7 72 65-136 40-133 (667)
340 3v65_B Low-density lipoprotein 44.0 1.1E+02 0.0038 23.7 17.2 108 17-134 117-234 (386)
341 1ijq_A LDL receptor, low-densi 42.5 1E+02 0.0036 23.0 18.7 110 17-133 31-151 (316)
342 3oky_A Plexin-A2; transmembran 41.4 50 0.0017 28.7 6.0 35 63-98 17-53 (681)
343 3ol2_B Plexin-B1; beta-propell 40.4 55 0.0019 27.5 5.9 36 62-98 16-53 (528)
344 1tl2_A L10, protein (tachylect 36.7 24 0.00082 26.7 2.9 76 55-133 32-115 (236)
345 2g8s_A Glucose/sorbosone dehyd 35.9 1.4E+02 0.0048 22.8 7.4 51 72-122 288-341 (353)
346 3tc9_A Hypothetical hydrolase; 35.8 1.6E+02 0.0055 23.2 15.4 109 17-137 138-260 (430)
347 4fww_A Macrophage-stimulating 35.6 81 0.0028 26.0 6.3 36 62-98 11-51 (527)
348 3f7f_A Nucleoporin NUP120; nuc 35.4 75 0.0026 27.9 6.1 37 63-99 222-259 (729)
349 3al9_A Plexin-A2; beta-propell 34.4 67 0.0023 26.9 5.6 35 63-98 18-54 (539)
350 2g8s_A Glucose/sorbosone dehyd 31.9 1.7E+02 0.0059 22.3 9.5 103 17-123 19-149 (353)
351 1olz_A Semaphorin 4D; developm 30.5 2.6E+02 0.0089 24.0 10.7 71 67-137 31-124 (663)
352 2hc5_A ORF 99, hypothetical pr 29.7 40 0.0014 22.5 2.8 18 82-99 70-87 (117)
353 3pbp_A Nucleoporin NUP82; beta 28.0 2.5E+02 0.0087 23.1 14.4 83 52-134 53-158 (452)
354 1q47_A Semaphorin 3A; beta pro 27.2 81 0.0028 26.1 4.8 71 63-133 30-122 (495)
355 4hvt_A Ritya.17583.B, post-pro 26.7 3.1E+02 0.01 23.6 11.0 123 9-133 283-429 (711)
356 3sbq_A Nitrous-oxide reductase 25.5 1.5E+02 0.0053 25.5 6.2 71 73-143 335-427 (638)
357 3kya_A Putative phosphatase; s 23.7 3.1E+02 0.011 22.6 14.2 114 19-133 250-409 (496)
358 4fei_A Heat shock protein-rela 22.9 59 0.002 20.5 2.6 36 2-42 57-92 (102)
359 4a9v_A PHOX; hydrolase, beta-p 22.5 3.5E+02 0.012 23.1 7.9 55 67-123 480-551 (592)
360 3gla_A Low molecular weight he 22.1 87 0.003 19.4 3.3 34 2-40 60-93 (100)
361 3uj4_A Inositol 1,4,5-trisphos 22.1 2.4E+02 0.0081 24.1 6.8 69 77-147 176-260 (604)
362 2l1s_A Uncharacterized protein 22.0 1.4E+02 0.0049 18.5 4.2 29 72-100 50-78 (83)
363 1gme_A Heat shock protein 16.9 21.8 80 0.0027 21.5 3.3 37 1-42 99-135 (151)
364 1cru_A Protein (soluble quinop 21.1 3.2E+02 0.011 21.8 9.6 60 63-123 28-100 (454)
365 2x8n_A CV0863; non-uniform sam 21.0 1.2E+02 0.0042 19.8 3.9 27 17-43 26-54 (111)
366 3mvd_K Regulator of chromosome 20.8 3E+02 0.01 21.3 14.9 120 12-134 123-271 (423)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.53 E-value=6.9e-13 Score=105.89 Aligned_cols=127 Identities=17% Similarity=0.151 Sum_probs=99.6
Q ss_pred eeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEE
Q psy16020 11 LNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVV 86 (151)
Q Consensus 11 ~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vi 86 (151)
.++..+.|.++.+.+ +++++|..||+|.+|+...+.. .......+..+..+|+|+.+.. +.|..|+. +.|++|
T Consensus 78 ~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~---~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGERGILVASDSGAVELWELDENET---LIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EEEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSS---CEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCc---eeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 344456899999875 5799999999999999864321 1111223333468999999973 56888875 689999
Q ss_pred eCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 87 DPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 87 d~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
|+++++..+++.+|++ .|.++.++++ .+++|++.|+.|++||.++.++...+..
T Consensus 155 d~~~~~~~~~~~~h~~---~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 210 (344)
T 4gqb_B 155 DLAQQVVLSSYRAHAA---QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC 210 (344)
T ss_dssp ETTTTEEEEEECCCSS---CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-
T ss_pred ECCCCcEEEEEcCcCC---ceEEEEecCCCCCceeeeccccccccccccccceeeeeec
Confidence 9999999999999975 8999999855 4789999999999999999998887743
No 2
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.45 E-value=1.8e-11 Score=99.18 Aligned_cols=130 Identities=14% Similarity=0.126 Sum_probs=101.1
Q ss_pred CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcce-EEEeCCCCCceEEEeeeCCEEEEEeC-
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYH-TVTLGLPHHSVRSLAAVYNKVWCGYK- 80 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~-~i~l~~~~~pV~~m~~v~~~Lw~g~~- 80 (151)
.+.+++..++-+ ++|.++.+.++.+++|..||+|.+|+..... ... ...+..+..+|+++.+.++.|.+|+.
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d 275 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT-----DITLRRVLVGHRAAVNVVDFDDKYIVSASGD 275 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSS-----CCEEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred CCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCC-----CceeeeEecCCCCcEEEEEeCCCEEEEEeCC
Confidence 345566666544 6777787777778888888888888765322 111 12333445899999998899999985
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.|++||.++++..+++.+|.. .|.++...+. ..++++.|+.|++||.++++++..+.
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~ 333 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKR---GIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVLE 333 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSS---CEEEEEEETT-EEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CeEEEEECCcCcEEEEEcCCCC---cEEEEEeCCC-EEEEEeCCCeEEEEECCCCCEEEEEe
Confidence 6899999999999999999975 8999999765 47799999999999999999998875
No 3
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.42 E-value=2.4e-11 Score=98.39 Aligned_cols=128 Identities=15% Similarity=0.119 Sum_probs=104.3
Q ss_pred CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-C
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-N 81 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n 81 (151)
.+.+++..++-+ ++|.++.+.++.+++|..||+|.+|+...+ + ....+..+..+|+|+.+.++.+.+|+. +
T Consensus 147 ~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~-----~--~~~~~~~h~~~v~~~~~~~~~l~s~s~dg 219 (445)
T 2ovr_B 147 VTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG-----E--CIHTLYGHTSTVRCMHLHEKRVVSGSRDA 219 (445)
T ss_dssp TTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT-----E--EEEEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred CCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcC-----c--EEEEECCCCCcEEEEEecCCEEEEEeCCC
Confidence 456677777644 799999999999999999999999987521 1 122344455899999999999888885 6
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.|++||.++++....+.+|.. .|.++...+. ..++++.|+.|++||.++.+.+..+.
T Consensus 220 ~i~~wd~~~~~~~~~~~~~~~---~v~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~ 276 (445)
T 2ovr_B 220 TLRVWDIETGQCLHVLMGHVA---AVRCVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQ 276 (445)
T ss_dssp EEEEEESSSCCEEEEEECCSS---CEEEEEECSS-CEEEEETTSCEEEEEGGGTEEEEEEC
T ss_pred EEEEEECCCCcEEEEEcCCcc---cEEEEEECCC-EEEEEcCCCEEEEEECCCCcEeEEec
Confidence 899999999999999999875 8999998554 47799999999999999999888875
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.41 E-value=1.9e-11 Score=94.89 Aligned_cols=113 Identities=18% Similarity=0.180 Sum_probs=91.6
Q ss_pred CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020 14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (151)
Q Consensus 14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~ 88 (151)
-.+.|.+|.++++ .+++|..||+|.+|+.... .....+.. +..||+++.+.. +.|..|+. +.|++||.
T Consensus 12 h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-----~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-----VEVRSIQV--TETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----EEEEEEEC--CSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-----ceeEEeec--cCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 3479999999754 6999999999999987521 12233333 348999999974 67888885 68999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~ 136 (151)
++++...++++|++ .|.++.+++++ .++|++.|++|++||.++..
T Consensus 85 ~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 85 NTGEKVVDFEAHPD---YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130 (304)
T ss_dssp TTCCEEEEEECCSS---CEEEEEECSSSSEEEEEETTSCEEEEEGGGTT
T ss_pred CCCcEEEEEeCCCC---cEEEEEEcCCCCEEEEECCCCeEEEEECCCCc
Confidence 99999999999986 89999999765 58899999999999998763
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.40 E-value=4.9e-11 Score=93.27 Aligned_cols=133 Identities=12% Similarity=0.107 Sum_probs=105.4
Q ss_pred CCCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-------
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN------- 73 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~------- 73 (151)
.+.+++..++-+ ++|.++.+.++ .++.|..||+|.+|+.. ......+..+..+|+++.+..+
T Consensus 95 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 95 ATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--------GQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT--------SCEEEEECCCSSCEEEEEECCC------C
T ss_pred CCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--------CCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 456677777644 79999998654 69999999999999864 2233445455689999988642
Q ss_pred -EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 74 -KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 74 -~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
.+..|+. +.|++||.++++.+..+.+|.. .|.++.+++++ ..++++.|+.|++||.++.+.+..+.....+
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v 240 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNS---NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 240 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCS---CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCE
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCC---cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcE
Confidence 5777764 6899999999999999999975 89999999776 4789999999999999999998888654443
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.39 E-value=3.2e-11 Score=94.74 Aligned_cols=127 Identities=15% Similarity=0.114 Sum_probs=100.1
Q ss_pred CCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020 5 HPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY 79 (151)
Q Consensus 5 ~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~ 79 (151)
+.+....+.-+ ..|.++.+.+ +.+.+|..||.|.+|+...+ .....+..+..||+++.+.. ..|..|+
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 153 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-------KLLHTLEGHAMPIRSLTFSPDSQLLVTAS 225 (321)
T ss_dssp TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCCCEEEECTTSCEEEEEC
T ss_pred CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------cEEEEEcccCCceeEEEEcCCCCEEEEEc
Confidence 34455555544 5788998875 47899999999999987421 11224444568999999974 4577777
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
. +.|++||.++++...++.+|+. .|.++.+++++ .++|++.|+.|++||.++.++++.+
T Consensus 226 ~dg~i~iwd~~~~~~~~~~~~h~~---~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 226 DDGYIKIYDVQHANLAGTLSGHAS---WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCeEEEEECCCcceeEEEcCCCC---ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 5 6899999999999999999975 89999999765 5889999999999999999988877
No 7
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.39 E-value=6.2e-11 Score=95.97 Aligned_cols=129 Identities=13% Similarity=0.124 Sum_probs=101.8
Q ss_pred CCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-Ce
Q psy16020 5 HPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NK 82 (151)
Q Consensus 5 ~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~ 82 (151)
+.+++..++-+ ++|.++.+.++.+++|..||.|.+|+...+ + ....+..+..++.++.+.++.|.+|+. +.
T Consensus 268 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~--~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~ 340 (445)
T 2ovr_B 268 TETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-----N--CIHTLTGHQSLTSGMELKDNILVSGNADST 340 (445)
T ss_dssp GTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTC-----C--EEEEECCCCSCEEEEEEETTEEEEEETTSC
T ss_pred CCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCC-----C--EEEEEcCCcccEEEEEEeCCEEEEEeCCCe
Confidence 44566666644 688888887778888888888888876421 1 122344445899999999999999885 68
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|++||.++++..+++..+......|.++.+++ ..+++++.|+.|++||..+++.+..+
T Consensus 341 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 341 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-NFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEEETTTCCEEEEECSTTSCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEEccCCCCCCCEEEEEECC-CEEEEEeCCCeEEEEECCCCceeeee
Confidence 99999999999999998544446899999975 45889999999999999999998887
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.38 E-value=1.9e-11 Score=97.51 Aligned_cols=130 Identities=12% Similarity=0.098 Sum_probs=94.6
Q ss_pred CCCCceeeeeeC-CCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C-EE
Q psy16020 3 YPHPTPYPLNKI-LDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N-KV 75 (151)
Q Consensus 3 ~~~~~~l~~i~l-~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~-~L 75 (151)
..+.+++..++- .+.|.++.+.++ .+..|..||+|.+|+.... +....+....+...++++.+.. + .|
T Consensus 156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP-----KPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS-----SCEEECC----CCCEEEEEECSSCTTEE
T ss_pred CCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc-----ceeeeeecceeeccceeeeecCCCCcce
Confidence 356677888774 479999998643 3556788999999987522 1222222222336789998863 3 46
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeee
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
.+|+. +.|++||.++++..+++.+|.+ .|+++++++++ +.+|++.|++|++||.++.+++..
T Consensus 231 ~sg~~dg~v~~wd~~~~~~~~~~~~h~~---~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 231 VFGDENGTVSLVDTKSTSCVLSSAVHSQ---CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp EEEETTSEEEEEESCC--CCEEEECCSS---CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred EEeccCCcEEEEECCCCcEEEEEcCCCC---CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 66775 6899999999999999999975 89999998664 578999999999999999877643
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.37 E-value=9.1e-11 Score=92.35 Aligned_cols=133 Identities=12% Similarity=0.074 Sum_probs=104.0
Q ss_pred CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY 79 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~ 79 (151)
.+.+++..++.+ +.|.++.+.+ +.+.+|..||.+.+|+...... . ......+..+..+|.|+.+. ++++..|+
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~-~--~~~~~~~~~h~~~v~~~~~~~~~~l~s~s 161 (340)
T 1got_B 85 YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG-N--VRVSRELAGHTGYLSCCRFLDDNQIVTSS 161 (340)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB-S--CEEEEEEECCSSCEEEEEEEETTEEEEEE
T ss_pred CCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC-c--ceeEEEecCCCccEEEEEECCCCcEEEEE
Confidence 455677777766 6899998865 4788999999999999753210 1 11122343445899999986 57788877
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+ +.|++||.++++...++.+|+. .|.++.+++++ .+++++.|+.|++||.++.++.+.+.
T Consensus 162 ~d~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~ 223 (340)
T 1got_B 162 GDTTCALWDIETGQQTTTFTGHTG---DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCC---ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc
Confidence 5 6899999999999999999975 89999999765 58899999999999999988887764
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.37 E-value=1.6e-11 Score=97.77 Aligned_cols=126 Identities=16% Similarity=0.177 Sum_probs=95.1
Q ss_pred eeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEe
Q psy16020 12 NKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVD 87 (151)
Q Consensus 12 i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid 87 (151)
....+.|.++.+.+ +++++|..||+|.+|+...+.. .....+....+..+|+|+.+.. +.|..|+. +.|++||
T Consensus 91 ~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~---~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKES---LLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EECSSCEEEEEEETTTEEEEEETTSCEEEC-----------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred CCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccce---eEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34557899999875 5799999999999998753221 1111233434468999999974 56877775 6899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
.++++....+.+|+. .|+++.++++ .++++++.|+.|++||.++.++...+..
T Consensus 168 ~~~~~~~~~~~~h~~---~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~ 222 (357)
T 4g56_B 168 LSQKAVLKSYNAHSS---EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF 222 (357)
T ss_dssp TTTTEEEEEECCCSS---CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC
T ss_pred CCCCcEEEEEcCCCC---CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee
Confidence 999999999999975 8999999854 4789999999999999999888776643
No 11
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.37 E-value=4.7e-11 Score=90.79 Aligned_cols=131 Identities=8% Similarity=0.060 Sum_probs=98.7
Q ss_pred ceeeeee--CCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC-C
Q psy16020 7 TPYPLNK--ILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK-N 81 (151)
Q Consensus 7 ~~l~~i~--l~~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~-n 81 (151)
+.+..++ .+..|.++.+. ++++++|..||.|.+|+.... +... .+..+..+|+++.+.. ++|.+|+. +
T Consensus 174 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~-----~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg 246 (313)
T 3odt_A 174 KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG-----DVLR--TYEGHESFVYCIKLLPNGDIVSCGEDR 246 (313)
T ss_dssp EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC-----CEEE--EEECCSSCEEEEEECTTSCEEEEETTS
T ss_pred ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch-----hhhh--hhhcCCceEEEEEEecCCCEEEEecCC
Confidence 3445555 34789999886 457999999999999987531 2222 3333459999999985 47887774 6
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
.|++||.++++..+.+..|.. .|.++.+++++-+++++.|+.|++||.++.+...+......+
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~~~~~~~ 309 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAI---SIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASEDEIKGEL 309 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSS---CEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC--------
T ss_pred EEEEEECCCCceeEEEeccCc---eEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehhhhhhhh
Confidence 999999999999999999864 899999998877889999999999999999988887665543
No 12
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.37 E-value=5.6e-11 Score=92.07 Aligned_cols=130 Identities=12% Similarity=0.160 Sum_probs=99.2
Q ss_pred ceeeeee--CCCceeeeEEeC------CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-----
Q psy16020 7 TPYPLNK--ILDTALPPVHVQ------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN----- 73 (151)
Q Consensus 7 ~~l~~i~--l~~~V~~i~~~~------~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~----- 73 (151)
++...+. ..++|.+|.+.+ ..++++.++|.|.+|+...++.. .......-..+..+|+++.+..+
T Consensus 8 ~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 85 (366)
T 3k26_A 8 KCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI--RLLQSYVDADADENFYTCAWTYDSNTSH 85 (366)
T ss_dssp EEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE--EEEEEEECSCTTCCEEEEEEEECTTTCC
T ss_pred EEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE--EeeeeccccCCCCcEEEEEeccCCCCCC
Confidence 3444555 347999999984 45999999999999998643211 11111222223488999999743
Q ss_pred -EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 74 -KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 74 -~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.|.+|+. +.|++||.++++..+++.+|.. .|.++.+++ ...+++++.|+.|++||.++.+.+..+
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITMQCIKHYVGHGN---AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEEEEETTCEEEEECTTTCCEEEEEESCCS---CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CEEEEecCCCEEEEEEchhceEeeeecCCCC---cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 5777775 6899999999999999999975 899999986 356889999999999999999888877
No 13
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.5e-10 Score=88.04 Aligned_cols=126 Identities=20% Similarity=0.197 Sum_probs=101.1
Q ss_pred ceeeeeeCC-CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeee-CCEEEEEeC
Q psy16020 7 TPYPLNKIL-DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAV-YNKVWCGYK 80 (151)
Q Consensus 7 ~~l~~i~l~-~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v-~~~Lw~g~~ 80 (151)
+.+..++.+ .+|.++.+. ++.+++|..||.|.+|+.. .+ ...+.. +..+|+++.+. ++++.+|+.
T Consensus 133 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--------~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 203 (313)
T 3odt_A 133 SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--------KV-IKTFSGIHNDVVRHLAVVDDGHFISCSN 203 (313)
T ss_dssp EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--------EE-EEEECSSCSSCEEEEEEEETTEEEEEET
T ss_pred cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--------ce-EEEEeccCcccEEEEEEcCCCeEEEccC
Confidence 445556544 688888874 5689999999999999832 21 222222 45999999997 467888875
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+.|++||.++++..+++.+|.. .|.++.+++++.+++++.|+.|++||.++.++++.+...
T Consensus 204 dg~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYEGHES---FVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred CCeEEEEECCchhhhhhhhcCCc---eEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEecc
Confidence 6899999999999999999975 899999998888999999999999999999999888643
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.36 E-value=4.5e-11 Score=96.74 Aligned_cols=129 Identities=17% Similarity=0.133 Sum_probs=102.5
Q ss_pred CCCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~ 77 (151)
+.+.+++..++-+ ++|.++.+.+ +.+++|..||+|.+|+.... .....+..+..+|+++.+.. +.|..
T Consensus 137 ~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~~~~l~s 209 (410)
T 1vyh_C 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPNGDHIVS 209 (410)
T ss_dssp TTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS-------CEEECCCCCSSCEEEEEECSSSSEEEE
T ss_pred CCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-------ceeEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 3455677777755 7999999874 46899999999999987421 11223444568999999974 56887
Q ss_pred EeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 78 GYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|+. +.|++||.++++..++|.+|.. .|.++.+.+++ .+++++.|+.|++||.++.+....+
T Consensus 210 ~s~D~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~ 272 (410)
T 1vyh_C 210 ASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272 (410)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEeCCCc---cEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEe
Confidence 775 6899999999999999999975 89999998665 4789999999999999998887766
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.36 E-value=1.1e-10 Score=90.52 Aligned_cols=120 Identities=15% Similarity=0.187 Sum_probs=95.7
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----CEEEEEeC-CeEEEE
Q psy16020 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYK-NKIHVV 86 (151)
Q Consensus 15 ~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----~~Lw~g~~-n~I~vi 86 (151)
...|.++.+.+ +.+.+|..||+|.+|+.... .....+..+ +..+|.++.+.. ..|..|+. +.|++|
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~-----~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW 213 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-----TPNFTLTTG-QERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS-----SCSEEEECC-CTTCEEEEEECCSTTCCEEEEEETTSEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC-----CccceeccC-CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 36899999975 36888999999999997521 122233333 347888888752 35777774 689999
Q ss_pred eCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 87 DPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 87 d~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
|.++++..+++++|.. .|.++.+++++ ..+|++.|+.|++||.+++++++.++.
T Consensus 214 d~~~~~~~~~~~~h~~---~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 268 (304)
T 2ynn_A 214 DYQTKSCVATLEGHMS---NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (304)
T ss_dssp ETTTTEEEEEEECCSS---CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eCCCCccceeeCCCCC---CEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC
Confidence 9999999999999975 89999999765 588999999999999999999998864
No 16
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.36 E-value=8.4e-11 Score=95.19 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=102.2
Q ss_pred CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-C
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-N 81 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n 81 (151)
.+.++++.++-+ ++|.++.+.++.+++|..||+|.+|+...+ + ..-.+..+..+|.++.+.++.+.+|+. +
T Consensus 161 ~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~-----~--~~~~~~~h~~~v~~l~~~~~~l~s~s~dg 233 (435)
T 1p22_A 161 NTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTG-----E--MLNTLIHHCEAVLHLRFNNGMMVTCSKDR 233 (435)
T ss_dssp SSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSC-----C--EEEEECCCCSCEEEEECCTTEEEEEETTS
T ss_pred CCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCC-----c--EEEEEcCCCCcEEEEEEcCCEEEEeeCCC
Confidence 455667777644 799999998888999999999999987532 1 122344455999999999999998885 6
Q ss_pred eEEEEeCCCCcEE---EEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 82 KIHVVDPKSLVVL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 82 ~I~vid~~t~~i~---~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.|++||.++++.. +.+.+|.. .|.++...+.. .++++.|+.|++||.++.+.+..+.
T Consensus 234 ~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 234 SIAVWDMASPTDITLRRVLVGHRA---AVNVVDFDDKY-IVSASGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp CEEEEECSSSSCCEEEEEECCCSS---CEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEeCCCCCCceeeeEecCCCC---cEEEEEeCCCE-EEEEeCCCeEEEEECCcCcEEEEEc
Confidence 8999999987754 66777864 89999997665 6799999999999999999998885
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.35 E-value=1.5e-11 Score=98.00 Aligned_cols=131 Identities=11% Similarity=0.144 Sum_probs=101.3
Q ss_pred CCCCceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEE
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKV 75 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~L 75 (151)
..+.+++..++-+ +.|.++.+.++ .+.++..||+|.+|+.... +....+.......+++++.+.. ..|
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~-----~~~~~~~~~~~~~~v~~v~~sp~~~~~l 242 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP-----KPATRIDFCASDTIPTSVTWHPEKDDTF 242 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS-----SCBCBCCCTTCCSCEEEEEECTTSTTEE
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC-----ceeeeeeeccccccccchhhhhcccceE
Confidence 3566778888765 79999998642 5778888999999876421 1222333444458899999863 357
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.+|+. +.|++||.++++..+++.+|.. .|+++++++++ +++|++.|++|++||.++.++++.+
T Consensus 243 a~g~~d~~i~~wd~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 243 ACGDETGNVSLVNIKNPDSAQTSAVHSQ---NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp EEEESSSCEEEEESSCGGGCEEECCCSS---CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred EEeecccceeEEECCCCcEeEEEeccce---eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 77775 6899999999999999999975 89999998654 5789999999999999999888765
No 18
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.35 E-value=1.3e-10 Score=94.00 Aligned_cols=129 Identities=15% Similarity=0.109 Sum_probs=102.2
Q ss_pred CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--------
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-------- 72 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-------- 72 (151)
.+.+++..++-+ +.|.++.+.+ +.+++|..||+|.+|+.... .....+..+..+|+|+.+..
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-------ECKAELREHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------ceeeEecCCCceEEEEEEcCcccccchh
Confidence 455677777654 6788888864 36888999999999987532 12234444568999998863
Q ss_pred --------------CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020 73 --------------NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 73 --------------~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~ 136 (151)
..|.+|+. +.|++||..+++...++.+|.+ .|+++.+++++- .+|++.|+.|++||..+.+
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~---~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS---CEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC---cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 35888885 6899999999999999999975 899999986654 7899999999999999999
Q ss_pred eeeeEe
Q psy16020 137 HLQDVD 142 (151)
Q Consensus 137 ~l~~id 142 (151)
+++.+.
T Consensus 372 ~~~~~~ 377 (410)
T 1vyh_C 372 CMKTLN 377 (410)
T ss_dssp CCEEEE
T ss_pred eEEEEc
Confidence 888875
No 19
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.34 E-value=1e-10 Score=92.89 Aligned_cols=130 Identities=15% Similarity=0.168 Sum_probs=100.6
Q ss_pred CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCC-------------------------C-------CCCC
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPD-------------------------G-------QWDL 50 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~-------------------------~-------~wd~ 50 (151)
..+.+++..++.+++|.++.+.++.++++. +|.|.+|+.... | .||+
T Consensus 88 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~ 166 (355)
T 3vu4_A 88 DVKKQDVSRIKVDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKL 166 (355)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEEC
T ss_pred CCCCcEEEEEECCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEEC
Confidence 345678888888899999999888877775 788888877543 2 1665
Q ss_pred Ccce-----------------EEEeCCCCCceEEEeeeC--CEEEEEeC-Ce-EEEEeCCCCcEEEEEE-e-cCCCCCce
Q psy16020 51 SKYH-----------------TVTLGLPHHSVRSLAAVY--NKVWCGYK-NK-IHVVDPKSLVVLKSFD-A-HPRRESQV 107 (151)
Q Consensus 51 ~~~~-----------------~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~-I~vid~~t~~i~~~~~-~-h~~~~~~I 107 (151)
.... ...+..+..+|+++.+.. ..|..|+. ++ |++||.++++..+++. + |.. .|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~---~v 243 (355)
T 3vu4_A 167 QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA---DV 243 (355)
T ss_dssp CC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS---CE
T ss_pred CCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC---cE
Confidence 5422 334555569999999974 45777775 56 9999999999999999 5 764 89
Q ss_pred eEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020 108 RQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 108 ~~m~~~~~~v-wis~~~d~~l~lwd~~t~~ 136 (151)
+++.+++++- +++++.|+.|++||.++.+
T Consensus 244 ~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 244 VDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999997654 7899999999999998653
No 20
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.34 E-value=8.3e-11 Score=92.39 Aligned_cols=128 Identities=15% Similarity=0.153 Sum_probs=101.1
Q ss_pred CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG 78 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g 78 (151)
.+.+++..+... ..+.++.+.+ +.+++|..+|.|.+|+...+ + ....+..+..+|+++.+.. +.|.+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~-----~--~~~~~~~~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG-----K--KEYSLDTRGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC-----S--EEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC-----c--eeEEecCCCceEEEEEECCCCCEEEEE
Confidence 455677777655 6788888865 47899999999999987532 1 2223333348899999974 568877
Q ss_pred eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+. +.|++||.++++..+++++|.. .|.++.+++++ .+++++.|+.|++||.++.+.+..+
T Consensus 183 ~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLLHTLEGHAM---PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL 244 (321)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSS---CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred cCCCeEEEEECCCCcEEEEEcccCC---ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE
Confidence 74 6899999999999999999975 89999999765 4889999999999999998887765
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.33 E-value=2.9e-10 Score=87.64 Aligned_cols=126 Identities=15% Similarity=0.111 Sum_probs=98.6
Q ss_pred ceeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020 7 TPYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK- 80 (151)
Q Consensus 7 ~~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~- 80 (151)
+....++= .++|.++.+.++ .+++|..||.|.+|+... + + ....+..+..+|+++.+.. +.|.+|+.
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~-~----~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 86 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-G----K--FEKTISGHKLGISDVAWSSDSNLLVSASDD 86 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-C----C--EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC-c----c--cchhhccCCCceEEEEEcCCCCEEEEECCC
Confidence 33344432 379999999754 688999999999998742 1 1 1223444558999999974 56777775
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.|++||.++++..+++.+|.. .|.++.+.+++ .+++++.|+.|++||.++.+.++.+.
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 146 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSN---YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 146 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSS---CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec
Confidence 6899999999999999999975 89999998664 58899999999999999998887774
No 22
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.33 E-value=2.6e-10 Score=88.17 Aligned_cols=129 Identities=12% Similarity=0.108 Sum_probs=98.1
Q ss_pred eeeeeeCC-CceeeeEEeCC-----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020 8 PYPLNKIL-DTALPPVHVQG-----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY 79 (151)
Q Consensus 8 ~l~~i~l~-~~V~~i~~~~~-----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~ 79 (151)
.+..++-+ +.|.+|.+.++ .+++|..||.|.+|+....+ ......+..+..+|+++.+.. +.|.+|+
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-----QTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-----CEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-----ceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 33444333 79999999864 68889999999999986422 111123333459999999974 5688887
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEE--eCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTW--AGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~--~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
. +.|++||.++++..+. ..|.. .|.++.+ .+++ .+++++.|+.|++||.++.++++.+....
T Consensus 106 ~dg~v~iwd~~~~~~~~~-~~~~~---~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQI-AQHDA---PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp TTSEEEEEETTTTEEEEE-EECSS---CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred CCCcEEEEEcCCCCceee-ccccC---ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 4 6899999999998774 45764 8999998 6554 48899999999999999999998887543
No 23
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.32 E-value=2.9e-10 Score=87.04 Aligned_cols=127 Identities=14% Similarity=0.150 Sum_probs=99.8
Q ss_pred CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020 14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (151)
Q Consensus 14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~ 88 (151)
...+|.++.+.++ .+++|..||.|.+|+.... +......+..+..+|+++.+.. +.|++|+. +.|++||.
T Consensus 96 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP-----TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-----CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 3478999999754 6999999999999987532 1112233444458999999974 56888875 68999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 148 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~ 148 (151)
++++..+++..|.. .|.++.+++++ .+++++.|+.|++||.++.+.+..++....+.
T Consensus 171 ~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~ 228 (337)
T 1gxr_A 171 HNQTLVRQFQGHTD---GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIF 228 (337)
T ss_dssp TTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred CCCceeeeeecccC---ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceE
Confidence 99999999998865 89999998665 57889999999999999999998887655443
No 24
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.31 E-value=3.1e-10 Score=90.90 Aligned_cols=136 Identities=15% Similarity=0.077 Sum_probs=107.3
Q ss_pred CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK 80 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~ 80 (151)
.+.+++..++-+ +.|.++.+.++.+++|..||.|.+|+....+ .....+..+..+|.++.+.. +.|.+|+.
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 164 ESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIAN------HQIGTLQGHSSEVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp TTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS------CEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCc------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 455677777644 7999999999999999999999999875322 12223333459999999974 56887775
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEc--CCCeEEEEeCCccceeeeEeCCcccc
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIR--LDSTLRMYNAHTYQHLQDVDIEPYVS 148 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~--~d~~l~lwd~~t~~~l~~idi~~~v~ 148 (151)
+.|++||.++++...++..|.. .|.++.++++ .++++++ .|+.|++||.++.+++..++....+.
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~ 307 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNA---AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVT 307 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSS---CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEE
T ss_pred CCeEEEccCCCCCccEEecCCcc---eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 6899999999999999998864 8999999863 5676765 79999999999999999987655443
No 25
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.31 E-value=1.7e-10 Score=93.34 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=106.1
Q ss_pred CCCceeeeee-CCCceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCC-C--------------Ccc-eEEEeCCCC
Q psy16020 4 PHPTPYPLNK-ILDTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWD-L--------------SKY-HTVTLGLPH 62 (151)
Q Consensus 4 ~~~~~l~~i~-l~~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd-~--------------~~~-~~i~l~~~~ 62 (151)
.+.+++..++ ..++|.++.+.+ +.+++|..||+|.+|+......-. . ..+ ..-.+..+.
T Consensus 191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 4566777777 447999998862 469999999999999986432100 0 000 122333445
Q ss_pred CceEEEeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeee
Q psy16020 63 HSVRSLAAVYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
.+|.++...++.+.+|+. +.|++||..+++...++.+|.. .|.++.+++++ .+++++.|+.|++||.+++++++.
T Consensus 271 ~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 271 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD---RIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS---CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC---CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 899999888999999885 6899999999999999999975 89999999664 588999999999999999999988
Q ss_pred Ee
Q psy16020 141 VD 142 (151)
Q Consensus 141 id 142 (151)
+.
T Consensus 348 ~~ 349 (464)
T 3v7d_B 348 LQ 349 (464)
T ss_dssp EC
T ss_pred Ee
Confidence 84
No 26
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.30 E-value=1.3e-10 Score=88.65 Aligned_cols=124 Identities=12% Similarity=0.072 Sum_probs=94.3
Q ss_pred CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEeC-CeEEEE
Q psy16020 14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYK-NKIHVV 86 (151)
Q Consensus 14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~~-n~I~vi 86 (151)
..++|.+|.+.+ +.+++|..||+|.+|+...+.. .......+..+..+|+++.+. ++.|.+|+. +.|++|
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS---NWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSC---CEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCC---cceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 347999999965 4699999999999999863221 001122333445999999996 356887775 689999
Q ss_pred eCCCC---------cEEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 87 DPKSL---------VVLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 87 d~~t~---------~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
|.+++ +....+..|.. .|.++.+.++ ...++++.|+.|++||.++.+.++.+..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKG---SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSS---CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred ecCCCcccccccCcceeeeecccCC---ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence 99987 56778888864 8999999975 4588999999999999999887766553
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.30 E-value=3.2e-10 Score=89.15 Aligned_cols=125 Identities=15% Similarity=0.104 Sum_probs=93.4
Q ss_pred ceeeeeeC-CCceeeeEE--------eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEE
Q psy16020 7 TPYPLNKI-LDTALPPVH--------VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKV 75 (151)
Q Consensus 7 ~~l~~i~l-~~~V~~i~~--------~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~L 75 (151)
++...++= .++|.++.+ .++.++.|..||+|.+|+......-.........+..+..+|+++.+.. ..|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 34455553 379999987 3346889999999999998632210000111234555569999999974 457
Q ss_pred EEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020 76 WCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 76 w~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t 134 (151)
..|+ ++.|++||.++++..+++.+|+. .|.++.+++++ ..++++.|+.|++||...
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~---~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQS---EVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCS---CEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCC---cEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 7776 46899999999999999999975 89999999665 478999999999999873
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.30 E-value=3.2e-10 Score=87.38 Aligned_cols=127 Identities=19% Similarity=0.112 Sum_probs=99.1
Q ss_pred CCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020 5 HPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY 79 (151)
Q Consensus 5 ~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~ 79 (151)
..++...++-. .+|.++.+.+ +.+++|..||.|.+|+...+ +. ...+..+..+|+++.+.. +.|..|+
T Consensus 54 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~-----~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~ 126 (312)
T 4ery_A 54 DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG-----KC--LKTLKGHSNYVFCCNFNPQSNLIVSGS 126 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CE--EEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred CcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC-----cE--EEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 34555566544 6899999875 47889999999999987532 12 223333458999999974 5677777
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
. +.|++||.++++..+.+..|.. .|.++.+++++ .+++++.|+.|++||.++.+.+..+
T Consensus 127 ~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 187 (312)
T 4ery_A 127 FDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 187 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCcEEEEECCCCEEEEEecCCCC---cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence 4 6899999999999999999975 89999998664 5789999999999999998887766
No 29
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.29 E-value=1.6e-10 Score=92.41 Aligned_cols=123 Identities=18% Similarity=0.186 Sum_probs=96.1
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCC-CCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEEE
Q psy16020 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQW-DLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVV 86 (151)
Q Consensus 15 ~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~w-d~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~vi 86 (151)
.++|.++.+.+ +.+++|..||+|.+|+...++.. ....+ ...+..+..+|+++.+.. +.|..|+. +.|++|
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREP-VITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSC-SEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCc-eEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 36999999965 57899999999999998654321 11111 123333459999999974 35777774 689999
Q ss_pred eCCCCcEEEEE--EecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 87 DPKSLVVLKSF--DAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 87 d~~t~~i~~~~--~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
|.++++...++ ..|.. .|.++.+++++ .+++++.|+.|++||.++.+.+..+
T Consensus 160 d~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPD---TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp ETTTTEEEEEECTTTCCS---CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ECCCCCccEEEecCCCCC---ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee
Confidence 99999999999 77864 89999999665 4889999999999999999998887
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.28 E-value=3.2e-10 Score=88.94 Aligned_cols=124 Identities=13% Similarity=0.199 Sum_probs=91.5
Q ss_pred CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK 80 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~ 80 (151)
++.++++.++-+ ++|.++.+.++.+.+|..||+|.+|+...+. ......+..+.+..+|+++.+.. +.|..|+.
T Consensus 2 ~~~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~---~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~ 78 (330)
T 2hes_X 2 ASINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDD---FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78 (330)
T ss_dssp -CCEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSC---CEEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred cccccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCC---eEEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence 456778888865 7999999999999999999999999875321 11112222333568999999974 56777774
Q ss_pred -CeEEEEeCC-------CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCC
Q psy16020 81 -NKIHVVDPK-------SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 81 -n~I~vid~~-------t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~ 133 (151)
+.|++||.+ +++..+.+.+|+. .|.++.+++++ .++|++.|+.|++||.+
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHEN---EVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC-------CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCC---cEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 689999984 3567788999975 89999999765 48899999999999994
No 31
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.28 E-value=7.9e-11 Score=92.53 Aligned_cols=128 Identities=10% Similarity=-0.015 Sum_probs=94.6
Q ss_pred CCCceeeeeeCC--CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEE
Q psy16020 4 PHPTPYPLNKIL--DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKV 75 (151)
Q Consensus 4 ~~~~~l~~i~l~--~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~L 75 (151)
.+.++++..+++ ++|.++.+++ +.+.+|..||+|.+|+...+. ...+..+....+|+|+.+.. ..|
T Consensus 112 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~------~~~~~~~~~~~~i~~~~~~pdg~~l 185 (343)
T 3lrv_A 112 KTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS------QYIVHSAKSDVEYSSGVLHKDSLLL 185 (343)
T ss_dssp TTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC------EEEEECCCSSCCCCEEEECTTSCEE
T ss_pred CCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc------EEEEEecCCCCceEEEEECCCCCEE
Confidence 345557777766 6799999866 467779999999999875321 11222233346899999974 456
Q ss_pred EEEe-CCeEEEEeCCCCcEE-EEEEe-cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 76 WCGY-KNKIHVVDPKSLVVL-KSFDA-HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 76 w~g~-~n~I~vid~~t~~i~-~~~~~-h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.+|+ ++.|++||.++++.. .+|++ |.. .|+++.+++++- +++++ ++.|++||.++.+..+.+
T Consensus 186 asg~~dg~i~iwd~~~~~~~~~~~~~~h~~---~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 186 ALYSPDGILDVYNLSSPDQASSRFPVDEEA---KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp EEECTTSCEEEEESSCTTSCCEECCCCTTS---CEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred EEEcCCCEEEEEECCCCCCCccEEeccCCC---CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence 6666 468999999999987 88988 864 999999998776 45555 559999999998776554
No 32
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.28 E-value=7.2e-10 Score=88.77 Aligned_cols=130 Identities=15% Similarity=0.171 Sum_probs=104.2
Q ss_pred CCCCceeeeeeC--CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020 3 YPHPTPYPLNKI--LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG 78 (151)
Q Consensus 3 ~~~~~~l~~i~l--~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g 78 (151)
..+.++...+.. .+.|.++.+.+ +.+++|..||.|.+|+...+ + ....+..+..+|.++...++.|.+|
T Consensus 120 ~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~-----~--~~~~~~~~~~~v~~~~~~~~~l~~~ 192 (401)
T 4aez_A 120 ADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ-----T--KLRTMAGHQARVGCLSWNRHVLSSG 192 (401)
T ss_dssp TTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC-----C--EEEEECCCSSCEEEEEEETTEEEEE
T ss_pred CCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC-----e--EEEEecCCCCceEEEEECCCEEEEE
Confidence 345667777776 47899999975 47999999999999987532 1 2223444569999999988899988
Q ss_pred eC-CeEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 79 YK-NKIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 79 ~~-n~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+. +.|++||.+ ..+....+.+|.. .|.++.+++++ .+++++.|+.|++||.++.+++..+.
T Consensus 193 ~~dg~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 256 (401)
T 4aez_A 193 SRSGAIHHHDVRIANHQIGTLQGHSS---EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT 256 (401)
T ss_dssp ETTSEEEEEETTSSSCEEEEEECCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC
T ss_pred cCCCCEEEEecccCcceeeEEcCCCC---CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec
Confidence 85 689999999 5778888999975 89999999664 58899999999999999988887763
No 33
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.28 E-value=9.4e-10 Score=89.00 Aligned_cols=118 Identities=13% Similarity=0.088 Sum_probs=97.0
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCc
Q psy16020 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLV 92 (151)
Q Consensus 16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~ 92 (151)
.+|.++...++.+++|..||.|.+|+.... .....+..+..+|+++.+.. +.|.+|+. +.|++||.++++
T Consensus 271 ~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 271 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQM-------KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ceEEEEcCCCCEEEEEeCCCeEEEEECCCC-------cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 688899888999999999999999987521 12234444569999999974 57888885 689999999999
Q ss_pred EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 93 VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 93 i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
..+++.+|+. .|.++.+++ ...++++.|+.|++||.++.+....+.-.
T Consensus 344 ~~~~~~~h~~---~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 391 (464)
T 3v7d_B 344 LMYTLQGHTA---LVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSYHHT 391 (464)
T ss_dssp EEEEECCCSS---CEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEEECT
T ss_pred EEEEEeCCCC---cEEEEEEcC-CEEEEEeCCCcEEEEECCCCceeeeecCC
Confidence 9999999975 899999985 45789999999999999998877776533
No 34
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.27 E-value=3.4e-10 Score=89.23 Aligned_cols=123 Identities=12% Similarity=0.115 Sum_probs=97.2
Q ss_pred CCCceeeeeeC-------CCceeeeEEeC--CeEEEEecC---CcEEEEEcCCCCCCCCCcceEEEeCC-----------
Q psy16020 4 PHPTPYPLNKI-------LDTALPPVHVQ--GRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGL----------- 60 (151)
Q Consensus 4 ~~~~~l~~i~l-------~~~V~~i~~~~--~~v~vgl~n---G~l~v~~~~~~~~wd~~~~~~i~l~~----------- 60 (151)
.+.+++..++. ..+|.++.+.+ +.+++|..| |.|.+|+.... +... .+..
T Consensus 215 ~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~-----~~~~--~~~~~~~~~~~~~~~ 287 (397)
T 1sq9_A 215 STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG-----ERIG--SLSVPTHSSQASLGE 287 (397)
T ss_dssp TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-----CEEE--EECBC--------CC
T ss_pred CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC-----cccc--eeccCcccccccccc
Confidence 45677888887 77999999864 578889989 99999997532 1222 2322
Q ss_pred --CCCceEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE------ec---------------CCCCCceeEEEEeC
Q psy16020 61 --PHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFD------AH---------------PRRESQVRQMTWAG 114 (151)
Q Consensus 61 --~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~------~h---------------~~~~~~I~~m~~~~ 114 (151)
+..+|+++.+. ++.|.+|+. +.|++||.++++...++. +| . ..|+++.+++
T Consensus 288 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~v~~~~~~~ 364 (397)
T 1sq9_A 288 FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE---PGVFDVKFLK 364 (397)
T ss_dssp BSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSS---CCEEEEEEEC
T ss_pred cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccC---CceeEEEecc
Confidence 45899999997 456888874 689999999999999999 76 4 4899999998
Q ss_pred CE-----------EEEEEcCCCeEEEEeCCccc
Q psy16020 115 DG-----------VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 115 ~~-----------vwis~~~d~~l~lwd~~t~~ 136 (151)
++ .+++++.|+.|++||..+++
T Consensus 365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 85 89999999999999998763
No 35
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.27 E-value=5.9e-10 Score=88.48 Aligned_cols=134 Identities=13% Similarity=0.123 Sum_probs=103.3
Q ss_pred CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCC-CcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDL-SKYHTVTLGLPHHSVRSLAAVY--NKVWC 77 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~-~~~~~i~l~~~~~pV~~m~~v~--~~Lw~ 77 (151)
.+.++.+.+..+ ..|.++.+.+ +.+.+|..||.+.+|+...+..-.. .....+.. +..+|.++.+.. ..|..
T Consensus 94 ~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~t 171 (354)
T 2pbi_B 94 FTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM--HTNYLSACSFTNSDMQILT 171 (354)
T ss_dssp TTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEE--CSSCEEEEEECSSSSEEEE
T ss_pred CCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeec--cCCcEEEEEEeCCCCEEEE
Confidence 455677778777 6888888865 4789999999999998754321111 12233333 348999999974 57888
Q ss_pred EeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--C-EEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 78 GYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--D-GVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~-~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
|++ +.|++||.++++..++|.+|.. .|.++.+.+ + ..+++++.|+.|++||.++.++++.+.
T Consensus 172 ~s~D~~v~lwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~ 237 (354)
T 2pbi_B 172 ASGDGTCALWDVESGQLLQSFHGHGA---DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE 237 (354)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSS---CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EeCCCcEEEEeCCCCeEEEEEcCCCC---CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 875 6899999999999999999975 899988864 2 468899999999999999998887764
No 36
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.26 E-value=3.6e-10 Score=87.20 Aligned_cols=133 Identities=12% Similarity=0.109 Sum_probs=104.0
Q ss_pred CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-C
Q psy16020 6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-N 81 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n 81 (151)
.++++.++.+..|.++.+.++.+++|..+|.|.+|+....+ ..+..........+|+++.+.. +.+.+|+. +
T Consensus 141 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg 216 (342)
T 1yfq_A 141 NLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE----DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG 216 (342)
T ss_dssp ESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCT----TCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred CCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccc----cccceeeecCCCCceeEEEECCCCCCEEEEEecCC
Confidence 45667777889999999999999999999999999986312 1212222333358999999974 56888775 6
Q ss_pred eEEEEeCCCC------cEEEEEEecCCC------CCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 82 KIHVVDPKSL------VVLKSFDAHPRR------ESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 82 ~I~vid~~t~------~i~~~~~~h~~~------~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.|++||.++. +....+..|... ...|.++.+++++ .+++++.|+.|++||..+.+++..+.
T Consensus 217 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence 8999998876 888899988531 2389999998755 37899999999999999999988875
No 37
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.26 E-value=5.1e-10 Score=88.85 Aligned_cols=122 Identities=17% Similarity=0.173 Sum_probs=94.2
Q ss_pred eeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----CEEEEEeC-C
Q psy16020 10 PLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYK-N 81 (151)
Q Consensus 10 ~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----~~Lw~g~~-n 81 (151)
..+..+ +.|.++.+.++ ++++|..||+|.+|+...+ +. ...+..+..+|.|+.+.. +.|+.|+. +
T Consensus 148 ~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-----~~--~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg 220 (354)
T 2pbi_B 148 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG-----QL--LQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 220 (354)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-----CE--EEEEECCSSCEEEEEECCCSSCCEEEEEETTS
T ss_pred eeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-----eE--EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC
Confidence 334333 67888888654 7999999999999987532 11 223333458999998852 57888874 6
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+|++||.++++..+++++|+. .|+++.+++++ .+++++.|++|++||.++.+.+..+
T Consensus 221 ~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 221 KAMVWDMRSGQCVQAFETHES---DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp CEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCcEEEEecCCCC---CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 899999999999999999975 89999998654 5889999999999999987766554
No 38
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.26 E-value=2.3e-10 Score=88.12 Aligned_cols=122 Identities=11% Similarity=0.105 Sum_probs=88.6
Q ss_pred CCCceeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEE-
Q psy16020 4 PHPTPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCG- 78 (151)
Q Consensus 4 ~~~~~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g- 78 (151)
...+++..+.- .++|.+|.+.+ +.+++|..||+|.+|+... .+.+..-....+|+++.+.. +.+.++
T Consensus 203 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 274 (340)
T 4aow_A 203 ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE--------GKHLYTLDGGDIINALCFSPNRYWLCAA 274 (340)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT--------TEEEEEEECSSCEEEEEECSSSSEEEEE
T ss_pred CCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc--------CceeeeecCCceEEeeecCCCCceeecc
Confidence 34455555553 37899999875 4688899999999998752 22222111237899999975 344444
Q ss_pred eCCeEEEEeCCCCcEEEEEE---------ecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020 79 YKNKIHVVDPKSLVVLKSFD---------AHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 79 ~~n~I~vid~~t~~i~~~~~---------~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~ 136 (151)
.++.|++||.++++...++. +|. ..|+++++++++ .+++++.|+.|++||++|++
T Consensus 275 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 275 TGPSIKIWDLEGKIIVDELKQEVISTSSKAEP---PQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTEEEEEETTTTEEEEEECCC-------CCC---CCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCEEEEEECCCCeEEEeccccceeeeccCCC---CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 46899999999998877765 343 489999999775 48899999999999999876
No 39
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.26 E-value=1e-09 Score=86.64 Aligned_cols=128 Identities=7% Similarity=0.015 Sum_probs=98.0
Q ss_pred CCceeeeee---CCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeC--CEE
Q psy16020 5 HPTPYPLNK---ILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVY--NKV 75 (151)
Q Consensus 5 ~~~~l~~i~---l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~--~~L 75 (151)
+.+....++ ..+.|.++.+.+ +.+++|..||.|.+|+... .....+.-. ....+|+++.+.. +.|
T Consensus 105 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l 178 (383)
T 3ei3_B 105 VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG------SVIQVFAKTDSWDYWYCCVDVSVSRQML 178 (383)
T ss_dssp STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS------CEEEEEECCCCSSCCEEEEEEETTTTEE
T ss_pred CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC------CceEEEeccCCCCCCeEEEEECCCCCEE
Confidence 345555555 347999999977 4789999999999998752 122222222 2237899999974 678
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc----cceeeeEe
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT----YQHLQDVD 142 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t----~~~l~~id 142 (151)
.+|+. +.|++||. +++...++.+|.. .|.++.+++++ ++++++.|+.|++||.++ .+++..+.
T Consensus 179 ~~~~~d~~i~i~d~-~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 248 (383)
T 3ei3_B 179 ATGDSTGRLLLLGL-DGHEIFKEKLHKA---KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP 248 (383)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECSSS---CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE
T ss_pred EEECCCCCEEEEEC-CCCEEEEeccCCC---cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec
Confidence 88885 68999999 6888899999975 89999999776 789999999999999998 56666554
No 40
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.25 E-value=1.3e-09 Score=85.66 Aligned_cols=125 Identities=19% Similarity=0.158 Sum_probs=97.4
Q ss_pred eeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CC
Q psy16020 8 PYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KN 81 (151)
Q Consensus 8 ~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n 81 (151)
+...++= .++|.++.+.++ .++.|..||+|.+|+.... .....++... .+|.++.+.. +.|.+|+ ++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~-----~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d~ 119 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT-----NKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDN 119 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-----CEEEEEECSS--SCEEEEEECTTSSEEEEEETTC
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-----CcceEeecCC--ccEEEEEECCCCCEEEEEeCCC
Confidence 3444543 379999999754 7999999999999986521 2333444444 8999999974 5677777 46
Q ss_pred eEEEEeCCCC----cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 82 KIHVVDPKSL----VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 82 ~I~vid~~t~----~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.|++||..+. +..+.+.+|+. .|.++.+.+++..++++.|+.|++||.++.+++..+.
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~ 181 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTG---YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSS---CEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eEEEEECccCCCcceeEEEecCCCc---cEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEc
Confidence 8999998875 47788889975 8999999888889999999999999999998887763
No 41
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.25 E-value=4.6e-10 Score=90.18 Aligned_cols=134 Identities=8% Similarity=0.042 Sum_probs=102.4
Q ss_pred CCCCceeeeeeC---CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----C-
Q psy16020 3 YPHPTPYPLNKI---LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----Y- 72 (151)
Q Consensus 3 ~~~~~~l~~i~l---~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~- 72 (151)
..+.++++.++. .+.|.++.+.+ +.+++|..||+|.+|+...+ +....+.++. ..+|+++... .
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~-~~~v~~~~~~~~~s~~ 272 (437)
T 3gre_A 199 IRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN-----VLIRSWSFGD-HAPITHVEVCQFYGKN 272 (437)
T ss_dssp TTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT-----EEEEEEBCTT-CEEEEEEEECTTTCTT
T ss_pred CCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc-----cEEEEEecCC-CCceEEEEeccccCCC
Confidence 345678888876 37999999964 46999999999999987521 1222333343 4799999654 2
Q ss_pred C-EEEEEeC-CeEEEEeCCCCcEEEEEEecCC-----------------------CCCceeEEEEeCCEEEEEEcCCCeE
Q psy16020 73 N-KVWCGYK-NKIHVVDPKSLVVLKSFDAHPR-----------------------RESQVRQMTWAGDGVWVSIRLDSTL 127 (151)
Q Consensus 73 ~-~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~-----------------------~~~~I~~m~~~~~~vwis~~~d~~l 127 (151)
+ .|.+|+. +.|++||.++++..+++.+|.. ....|.++.+++...+++++.|+.|
T Consensus 273 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i 352 (437)
T 3gre_A 273 SVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSI 352 (437)
T ss_dssp EEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEE
T ss_pred ccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeE
Confidence 2 4666765 5799999999999999997742 2235889999977789999999999
Q ss_pred EEEeCCccceeeeEe
Q psy16020 128 RMYNAHTYQHLQDVD 142 (151)
Q Consensus 128 ~lwd~~t~~~l~~id 142 (151)
++||..+.+.++.+.
T Consensus 353 ~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 353 VMFSLNELSSSKAVI 367 (437)
T ss_dssp EEEETTCGGGCEEEE
T ss_pred EEEECCCcccceEEe
Confidence 999999999888774
No 42
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.23 E-value=1.7e-10 Score=89.29 Aligned_cols=116 Identities=11% Similarity=0.114 Sum_probs=91.8
Q ss_pred CceeeeEEeCC------eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEE
Q psy16020 16 DTALPPVHVQG------RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHV 85 (151)
Q Consensus 16 ~~V~~i~~~~~------~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~v 85 (151)
..|.++.+.++ .+++|..||.|.+|+.... +.... +..+..+|+++.+.. +.|.+|+. +.|++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-----~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~i 142 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM-----QCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDHALRL 142 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC-----CEEEE--EESCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc-----eEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 67999999765 6999999999999986521 22223 333459999999964 56888774 68999
Q ss_pred EeCCCCcEEEEE---EecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 86 VDPKSLVVLKSF---DAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 86 id~~t~~i~~~~---~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
||.++++....+ ..|. ..|.++.+++++ .+++++.|+.|++||.++.+.++.+
T Consensus 143 wd~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 143 WNIQTDTLVAIFGGVEGHR---DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp EETTTTEEEEEECSTTSCS---SCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred EEeecCeEEEEeccccccc---CceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccc
Confidence 999999999998 5665 489999998665 5889999999999999988766544
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.23 E-value=6.1e-10 Score=87.66 Aligned_cols=130 Identities=12% Similarity=0.155 Sum_probs=102.4
Q ss_pred CCCceeeeeeCCC-c---------------eeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceE
Q psy16020 4 PHPTPYPLNKILD-T---------------ALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVR 66 (151)
Q Consensus 4 ~~~~~l~~i~l~~-~---------------V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~ 66 (151)
.+.+++..++.+. . +.++.+. ++.+++|..+|.|.+|+.... +.... +..+..+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~-----~~~~~--~~~~~~~i~ 251 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK-----TPTGK--LIGHHGPIS 251 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS-----SCSEE--ECCCSSCEE
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC-----ceeee--eccCCCceE
Confidence 3455666666663 3 8888775 557999999999999998632 12223 333458999
Q ss_pred EEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 67 SLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 67 ~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
++.+.. +.|.+|+. +.|++||.++++....+..|.. .|.++.+++++.+++++.|+.|++||.++.+.+..+..
T Consensus 252 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ---SIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp EEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS---CEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc---cEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc
Confidence 999974 56888884 6899999999999999988864 89999999888899999999999999999998888764
No 44
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.23 E-value=5e-10 Score=87.45 Aligned_cols=124 Identities=12% Similarity=0.044 Sum_probs=93.4
Q ss_pred eeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcc-eEEEeCCCCCceEEEeeeC--CEEEEEeC-C
Q psy16020 10 PLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKY-HTVTLGLPHHSVRSLAAVY--NKVWCGYK-N 81 (151)
Q Consensus 10 ~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~-~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n 81 (151)
..++=+ ++|.+|.+.+ +.++.|..||+|.+|+...+.. ... ....+..+..+|+++.+.. +.|..|+. +
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 344433 7999999874 4699999999999998752211 111 1223444569999999974 56777774 6
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeee
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
.|++||.++++..+++.+|.. .|.++.+++++ .++|++.|+.|++||.+. +.+..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~ 143 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKS---DVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLAT 143 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSS---CEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEE
T ss_pred EEEEEECCCCCeeEEEccCCC---cEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEE
Confidence 899999999999999999975 89999998665 588999999999999874 34433
No 45
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.22 E-value=1e-09 Score=88.08 Aligned_cols=134 Identities=15% Similarity=0.124 Sum_probs=94.6
Q ss_pred eeeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCC-CCCC-------cceEEEeC---CCCCceEEEeeeC--CEE
Q psy16020 10 PLNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQ-WDLS-------KYHTVTLG---LPHHSVRSLAAVY--NKV 75 (151)
Q Consensus 10 ~~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~-wd~~-------~~~~i~l~---~~~~pV~~m~~v~--~~L 75 (151)
+.+..++.|.|+.+.+ ++.++..+++++.+|+...+.. ..+. .+..+... .....|+++.+.. +.|
T Consensus 59 ~~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 59 KSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred EecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 3345668999999975 3555666699999998753210 0000 00000000 1113599999973 567
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
..|+. +.|++||.++++..+.+.+|.. .|.++.+++++ .+++++.|+.|++||.++.+....+.....
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~---~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~ 208 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQ---DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG 208 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCC---CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCC
Confidence 77775 6899999999999999999975 89999998664 488999999999999999988877765443
No 46
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.21 E-value=2.1e-09 Score=82.17 Aligned_cols=129 Identities=11% Similarity=0.090 Sum_probs=96.6
Q ss_pred eeeeeeCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-Ce
Q psy16020 8 PYPLNKILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NK 82 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~ 82 (151)
.+.....+++|.++.+.++ .+++|. ||.|.+|+....+. ......+....+..+|+++.+.. +.|.+|+. +.
T Consensus 44 ~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 120 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN--KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120 (337)
T ss_dssp EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC--CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc--eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 3444556689999998754 455555 99999999865432 12334444434569999999984 56888875 68
Q ss_pred EEEEeCCCCc--EEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 83 IHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 83 I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
|++||.++++ ....+..|.. .|.++.+++++ .+++++.|+.|++||.++.+.+..+.
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~ 180 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAP---ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 180 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCCcceeeecccCCC---ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee
Confidence 9999999988 6677777764 89999998664 57889999999999999998888774
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.21 E-value=2.6e-09 Score=84.89 Aligned_cols=132 Identities=8% Similarity=0.080 Sum_probs=100.7
Q ss_pred CCCceeeeee-CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020 4 PHPTPYPLNK-ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG 78 (151)
Q Consensus 4 ~~~~~l~~i~-l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g 78 (151)
.+.+++..++ .+++|.++.+.++ .+++|..||+|.+|+.... +....+. .+..+|+++.+.. +.|..|
T Consensus 127 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-----~~~~~~~--~h~~~v~~~~~~~~~~~l~s~ 199 (420)
T 3vl1_A 127 NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-----SNPRTLI--GHRATVTDIAIIDRGRNVLSA 199 (420)
T ss_dssp TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CCCEEEE--CCSSCEEEEEEETTTTEEEEE
T ss_pred CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----cCceEEc--CCCCcEEEEEEcCCCCEEEEE
Confidence 3445555553 4479999999754 7999999999999998632 2233333 3459999999974 568887
Q ss_pred eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe---------------------CC-EEEEEEcCCCeEEEEeCCcc
Q psy16020 79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA---------------------GD-GVWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~---------------------~~-~vwis~~~d~~l~lwd~~t~ 135 (151)
+. +.|++||.++++..+++..|......|.++.+. ++ ...++++.|+.|++||.++.
T Consensus 200 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 200 SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC
T ss_pred cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC
Confidence 75 689999999999999999876655677777763 33 35789999999999999999
Q ss_pred ceeeeEe
Q psy16020 136 QHLQDVD 142 (151)
Q Consensus 136 ~~l~~id 142 (151)
+.+..+.
T Consensus 280 ~~~~~~~ 286 (420)
T 3vl1_A 280 EQTIQLP 286 (420)
T ss_dssp CEEEEEC
T ss_pred ceeEEcc
Confidence 8887774
No 48
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.21 E-value=5.3e-10 Score=89.32 Aligned_cols=127 Identities=14% Similarity=0.113 Sum_probs=89.0
Q ss_pred CCCceeeeeeCCCceeeeEEeCC-eEEEEecCCcEEEEEcCCC---------------------------------C---
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQG-RVVCALADGSVAIFRRGPD---------------------------------G--- 46 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~---------------------------------~--- 46 (151)
.+.+++..++.+..|.++.+.++ +.++..+++.+.+|....+ +
T Consensus 165 ~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 165 SDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp TTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred CCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 45566677776777888887643 4555555666666644311 0
Q ss_pred ----CCCCCcce-----EEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEE-EecCCCCCceeEEEEe
Q psy16020 47 ----QWDLSKYH-----TVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKSF-DAHPRRESQVRQMTWA 113 (151)
Q Consensus 47 ----~wd~~~~~-----~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~~-~~h~~~~~~I~~m~~~ 113 (151)
.|+..... ...+..+..+|+||++.. ..|..|+. +.|++||+++++..+++ ++|+. .|++++++
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~---~V~~v~fS 321 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSF---AITEVTIS 321 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSS---CEEEEEEC
T ss_pred eEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccC---CEEEEEEC
Confidence 12221111 112333458999999974 45777875 68999999999999986 68975 89999999
Q ss_pred CCEE-EEEEcCCCeEEEEeCC
Q psy16020 114 GDGV-WVSIRLDSTLRMYNAH 133 (151)
Q Consensus 114 ~~~v-wis~~~d~~l~lwd~~ 133 (151)
++|- ++|++.|++||+||..
T Consensus 322 pdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 322 PDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp TTSCEEEEEETTSEEEEEECC
T ss_pred CCCCEEEEEeCCCeEEEEEcC
Confidence 8875 8899999999999985
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=6e-10 Score=86.62 Aligned_cols=124 Identities=11% Similarity=0.053 Sum_probs=93.1
Q ss_pred eeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEeC
Q psy16020 8 PYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYK 80 (151)
Q Consensus 8 ~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~~ 80 (151)
++..++- .++|.+|.+.+ +++++|..||.|.+|+.... .......+..+..+|+++.+. ++.|..|+.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-----EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-----cceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc
Confidence 3444543 47999999874 46888889999999987421 111223455556999999996 467888875
Q ss_pred -CeEEEEeCCCCc--EEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccceee
Q psy16020 81 -NKIHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 81 -n~I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
+.|++||.++++ ....+..|.. .|.++.++++ ..+++++.|+.|++||.++.+...
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSA---SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSS---CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC
T ss_pred CCEEEEEEcCCCceeEeeeecCCCc---ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee
Confidence 689999999997 6677777764 8999999975 468899999999999999874433
No 50
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.21 E-value=6.2e-10 Score=90.57 Aligned_cols=134 Identities=10% Similarity=0.033 Sum_probs=100.2
Q ss_pred CCceeeee---eCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-----E
Q psy16020 5 HPTPYPLN---KILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-----K 74 (151)
Q Consensus 5 ~~~~l~~i---~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-----~ 74 (151)
+.+++..+ ..+..|.++.+.++ .+++|..+|.+.+|+......-. .....+. .+..+|+++.+..+ .
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~-~~~~~~~--~h~~~v~~~~~sp~~~~~~~ 212 (450)
T 2vdu_B 136 SKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK-FTQEPIL--GHVSMLTDVHLIKDSDGHQF 212 (450)
T ss_dssp SSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS-CCCCCSE--ECSSCEEEEEEEECTTSCEE
T ss_pred CCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc-ccceeee--cccCceEEEEEcCCCCCCcE
Confidence 45667776 46689999999754 79999999999999875322110 0111122 23489999999754 5
Q ss_pred EEEEeC-CeEEEEeCCCCcEEEE-EEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 75 VWCGYK-NKIHVVDPKSLVVLKS-FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 75 Lw~g~~-n~I~vid~~t~~i~~~-~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
|..|+. +.|++||..+++..++ +.+|.. .|.++.++....+++++.|+.|++||.+++++++.+...
T Consensus 213 l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~---~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQCFIVDKWLFGHKH---FVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp EEEEETTSCEEEEEESCTTCEEEECCCCSS---CEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred EEEEcCCCcEEEEECCCCceeeeeecCCCC---ceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecch
Confidence 777774 6899999999998887 447864 899999983345889999999999999999999998754
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.21 E-value=4.3e-10 Score=89.43 Aligned_cols=108 Identities=12% Similarity=0.165 Sum_probs=88.9
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe-CCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~~~~h 100 (151)
++.+.+|..||.|.+|+.. ....+.. ..+..+|+++.+.. +.|..|+. +.|++||.++++..+++.+|
T Consensus 109 ~~~l~~~~~dg~i~iwd~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSN--------FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp SCEEEEEETTSCEEEECTT--------SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC
T ss_pred CCEEEEEECCCCEEEEeCC--------CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC
Confidence 4578999999999999754 2233333 34569999999974 56888875 68999999999999999999
Q ss_pred CCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 101 PRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 101 ~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
.. .|.++.+++++ .+++++.|+.|++||.++.+.++.+..
T Consensus 181 ~~---~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 221 (420)
T 3vl1_A 181 RA---TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNR 221 (420)
T ss_dssp SS---CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECB
T ss_pred CC---cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeec
Confidence 75 89999999664 478999999999999999999998863
No 52
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.21 E-value=1.3e-09 Score=83.12 Aligned_cols=119 Identities=17% Similarity=0.252 Sum_probs=84.3
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCC-----------------------------------------CCCCCc
Q psy16020 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDG-----------------------------------------QWDLSK 52 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~-----------------------------------------~wd~~~ 52 (151)
+.+.++.+. ++.++.|..||+|.+|+...+. .||...
T Consensus 151 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~ 230 (318)
T 4ggc_A 151 QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 230 (318)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT
T ss_pred CceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc
Confidence 566666654 3468888889999999764210 122222
Q ss_pred ceEEEeCCCCCceEEEeee--CCEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCe
Q psy16020 53 YHTVTLGLPHHSVRSLAAV--YNKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDST 126 (151)
Q Consensus 53 ~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~ 126 (151)
...........++.++.+. ++.+.++++ +.|++||.++++..+++.+|++ .|++|++++++ .++|++.|++
T Consensus 231 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~---~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 231 GACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS---RVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp CCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSCEEEEETTTE
T ss_pred ccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEecCCe
Confidence 1111111123566777775 367777653 6899999999999999999975 89999999765 4889999999
Q ss_pred EEEEeCCccce
Q psy16020 127 LRMYNAHTYQH 137 (151)
Q Consensus 127 l~lwd~~t~~~ 137 (151)
|++||..+.+|
T Consensus 308 v~iWd~~~~dP 318 (318)
T 4ggc_A 308 LRLWRCFELDP 318 (318)
T ss_dssp EEEECCSCCCC
T ss_pred EEEEECCCCCC
Confidence 99999987653
No 53
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.20 E-value=3.3e-09 Score=81.93 Aligned_cols=142 Identities=15% Similarity=0.117 Sum_probs=106.9
Q ss_pred CCCCceeeeeeCCCceeeeEEeCC--eEEEEecC-----CcEEEEEcCCCCCC------CCCcceEEEeCCCCCceEEEe
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQG--RVVCALAD-----GSVAIFRRGPDGQW------DLSKYHTVTLGLPHHSVRSLA 69 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~~--~v~vgl~n-----G~l~v~~~~~~~~w------d~~~~~~i~l~~~~~pV~~m~ 69 (151)
..+.+++..++.+.+|.++.+.++ .++++..+ |.|.+|+......- .......+.......+++++.
T Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 103 VSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp TTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred CCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence 456788888998899999999754 68888888 99999998643210 001112222222123899999
Q ss_pred eeC--CEEEEEeC-CeEEEEeCCC-CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 70 AVY--NKVWCGYK-NKIHVVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 70 ~v~--~~Lw~g~~-n~I~vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+.. +.|.+|+. +.|++||..+ .+..+.+..|.. .|.++.+++++ .+++++.|+.|++||.++.+.+..+...
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 259 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK---SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD 259 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC---ceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC
Confidence 863 57888875 6899999999 889999999864 89999998665 4778899999999999999999888754
Q ss_pred ccc
Q psy16020 145 PYV 147 (151)
Q Consensus 145 ~~v 147 (151)
..+
T Consensus 260 ~~~ 262 (369)
T 3zwl_B 260 CPL 262 (369)
T ss_dssp SCE
T ss_pred CCc
Confidence 433
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.20 E-value=5.7e-10 Score=86.22 Aligned_cols=130 Identities=10% Similarity=0.130 Sum_probs=92.7
Q ss_pred CCCceeeeeeCCCceeeeEEeC-----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC---EE
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN---KV 75 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~-----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~---~L 75 (151)
.+.++......+..|.++.+.+ +.+++|..||.|.+|+...... ........+..+..+|+++.+..+ .+
T Consensus 198 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 275 (357)
T 3i2n_A 198 RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP--TKGFASVSEKAHKSTVWQVRHLPQNRELF 275 (357)
T ss_dssp TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET--TTEEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc--ccceeeeccCCCcCCEEEEEECCCCCcEE
Confidence 3455666667788999999975 6799999999999998753211 111111122234599999999863 36
Q ss_pred EEEeC-CeEEEEeCCCC-------------------cEEEEEEecCCCCCceeEEEEeCCEE-EE-EEcCCCeEEEEeCC
Q psy16020 76 WCGYK-NKIHVVDPKSL-------------------VVLKSFDAHPRRESQVRQMTWAGDGV-WV-SIRLDSTLRMYNAH 133 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~-------------------~i~~~~~~h~~~~~~I~~m~~~~~~v-wi-s~~~d~~l~lwd~~ 133 (151)
.+|+. +.|++||.++. +...++.+|.. .|.++.+++++- ++ |++.|+.|++||..
T Consensus 276 ~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 276 LTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ---PISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS---CEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC---CeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 66664 68999998753 56778888864 899999997764 44 89999999999999
Q ss_pred cccee
Q psy16020 134 TYQHL 138 (151)
Q Consensus 134 t~~~l 138 (151)
+++.+
T Consensus 353 ~~~~i 357 (357)
T 3i2n_A 353 KLNKI 357 (357)
T ss_dssp C----
T ss_pred CcccC
Confidence 87653
No 55
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.20 E-value=9.8e-10 Score=84.86 Aligned_cols=120 Identities=15% Similarity=0.169 Sum_probs=90.7
Q ss_pred eeeeeeCC-CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----------
Q psy16020 8 PYPLNKIL-DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---------- 72 (151)
Q Consensus 8 ~l~~i~l~-~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---------- 72 (151)
++..++.+ ++|.++.+.+ +.+.+|..||+|.+|+....+.+ .+. .+..+..+|+++.+..
T Consensus 91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~---~~~--~~~~h~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT---SPI--IIDAHAIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB---CCE--EEECCSSCEEEEEECCCC--------
T ss_pred EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce---eee--eeecccCccceEeecCCcccccccCC
Confidence 33444433 6899999875 47889999999999998643322 122 2333348899998864
Q ss_pred -----CEEEEEeC-CeEEEEeCCCCc----EEEEEEecCCCCCceeEEEEeCC----EEEEEEcCCCeEEEEeCCcc
Q psy16020 73 -----NKVWCGYK-NKIHVVDPKSLV----VLKSFDAHPRRESQVRQMTWAGD----GVWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 73 -----~~Lw~g~~-n~I~vid~~t~~----i~~~~~~h~~~~~~I~~m~~~~~----~vwis~~~d~~l~lwd~~t~ 135 (151)
..|..|+. ++|++||.++.+ ..+++.+|++ .|.++.++++ ..++|++.|++|++||.++.
T Consensus 166 ~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~---~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD---WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS---CEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC---ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 36777774 689999988766 7788999975 8999999986 57899999999999998864
No 56
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.20 E-value=7.2e-10 Score=91.78 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=103.2
Q ss_pred CCceeeeeeCCCceeeeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020 5 HPTPYPLNKILDTALPPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK- 80 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~- 80 (151)
..+++..++.+.++.++.+.++.+++|.. ||.|.+|+.... ......+..+..+|+++.+.. ..|.+|+.
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 509 (615)
T 1pgu_A 436 TGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDL------EVSFDLKTPLRAKPSYISISPSETYIAAGDVM 509 (615)
T ss_dssp TCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEE------EEEEECSSCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCc------cccccccCCccCceEEEEECCCCCEEEEcCCC
Confidence 56788888888999999999888999998 999999987521 000033444568999999963 56888875
Q ss_pred CeEEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeC----------C-EEEEEEcCCCeEEEEeCCcc-ceeeeE
Q psy16020 81 NKIHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAG----------D-GVWVSIRLDSTLRMYNAHTY-QHLQDV 141 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~----------~-~vwis~~~d~~l~lwd~~t~-~~l~~i 141 (151)
+.|++||.++++..+++.+ |.. .|+++.+++ + ..+++++.|+.|++||..+. ++++.+
T Consensus 510 g~i~iw~~~~~~~~~~~~~~h~~---~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 580 (615)
T 1pgu_A 510 GKILLYDLQSREVKTSRWAFRTS---KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL 580 (615)
T ss_dssp SCEEEEETTTTEEEECCSCCCSS---CEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEET
T ss_pred CeEEEeeCCCCcceeEeecCCCC---ceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhh
Confidence 6899999999999999887 864 899999987 4 45889999999999999987 666654
No 57
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.20 E-value=1.3e-09 Score=92.40 Aligned_cols=119 Identities=21% Similarity=0.228 Sum_probs=96.1
Q ss_pred CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020 16 DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~ 89 (151)
+.|.++.+.++ ++..|..||+|.+|+... ......+..+..+|+++.+.. +.|..|+. +.|++||..
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-------~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTT-------BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCC-------CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 68999999875 488999999999998531 112234566679999999974 45776774 689999999
Q ss_pred CCcEEEEEE-------ecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 90 SLVVLKSFD-------AHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 90 t~~i~~~~~-------~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+++..+.+. +|+. .|.++.+++++ .++|++.|++|++||.++++.++.+...
T Consensus 221 ~g~~~~~~~~~~~~~~~h~~---~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 221 DGTKTGVFEDDSLKNVAHSG---SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp TCCEEEECBCTTSSSCSSSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCcEeeeeccccccccccCC---CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 999999985 6864 89999999775 4889999999999999999999888643
No 58
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.19 E-value=2.4e-09 Score=88.59 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=96.1
Q ss_pred CceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK 80 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~ 80 (151)
.+.++.++-+ ++|.++.+.++ .+.+|..||+|.+|+.. + .....+..+..+|++|.+.. ..|..|+.
T Consensus 416 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~------~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 416 GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--G------QLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--S------CEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--C------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 4566666644 79999998753 68889999999999853 1 12223334459999999974 45777775
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.|++||. +++..+++.+|.. .|+++++++++- +++++.|+.|++||. ++++++.+.
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~---~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~ 546 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSS---SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 546 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSS---CEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred CCEEEEEcC-CCCEEEEEeCCCC---CEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc
Confidence 58999994 7899999999975 899999997765 789999999999995 578777764
No 59
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.18 E-value=2.2e-09 Score=81.63 Aligned_cols=133 Identities=15% Similarity=0.210 Sum_probs=95.9
Q ss_pred ceeeeeeC-CCceeeeEEeC----CeEEEEecCCcEEEEEcCCCC---CCC-----------------------------
Q psy16020 7 TPYPLNKI-LDTALPPVHVQ----GRVVCALADGSVAIFRRGPDG---QWD----------------------------- 49 (151)
Q Consensus 7 ~~l~~i~l-~~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~---~wd----------------------------- 49 (151)
+++..++- +++|.++.+.+ +.+++|..||.|.+|+..... .|.
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 180 (351)
T 3f3f_A 101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRF 180 (351)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSS
T ss_pred ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCC
Confidence 45666654 37999999975 469999999999999965321 010
Q ss_pred ------------------CCcc---eEEEeCCCCCceEEEeeeCC-----E-EEEEeC-CeEEEEeCCCC----------
Q psy16020 50 ------------------LSKY---HTVTLGLPHHSVRSLAAVYN-----K-VWCGYK-NKIHVVDPKSL---------- 91 (151)
Q Consensus 50 ------------------~~~~---~~i~l~~~~~pV~~m~~v~~-----~-Lw~g~~-n~I~vid~~t~---------- 91 (151)
.... ....+..+..+|+++.+..+ + |..|+. +.|++||..+.
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 260 (351)
T 3f3f_A 181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL 260 (351)
T ss_dssp SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------
T ss_pred CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc
Confidence 0000 12234445689999999754 4 666664 68999998875
Q ss_pred ------------------------------------cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020 92 ------------------------------------VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 92 ------------------------------------~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t 134 (151)
+...++.+|.. .|+++.+++++ .+++++.|+.|++||..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 261 TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNG---EVWSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ------------------------------CCSEEEEEEEEECTTSS---CEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccc---cEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 66777788864 89999999765 488999999999999998
Q ss_pred cceeeeEe
Q psy16020 135 YQHLQDVD 142 (151)
Q Consensus 135 ~~~l~~id 142 (151)
.+.++.+.
T Consensus 338 ~~~~~~~~ 345 (351)
T 3f3f_A 338 SNEFKCMS 345 (351)
T ss_dssp TSCEEEEE
T ss_pred Ccchhhee
Confidence 76666553
No 60
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.6e-09 Score=87.03 Aligned_cols=133 Identities=7% Similarity=0.050 Sum_probs=98.1
Q ss_pred eeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcC--CCCCCC----CCcceEEEeCC--CCCceEEEeee----CC
Q psy16020 8 PYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRG--PDGQWD----LSKYHTVTLGL--PHHSVRSLAAV----YN 73 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~--~~~~wd----~~~~~~i~l~~--~~~pV~~m~~v----~~ 73 (151)
+.......++|.++.+.+ +.+++|..||+|.+|+.. ..+.-- ......+.+.. ....+.|+... ++
T Consensus 104 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 104 SSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp CSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred eeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 444556678999999976 469999999999999874 112100 00111222221 23677788754 45
Q ss_pred EEEEEeC-CeEEEEeCCCCcEEEEEEe--cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 74 KVWCGYK-NKIHVVDPKSLVVLKSFDA--HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 74 ~Lw~g~~-n~I~vid~~t~~i~~~~~~--h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
.|.+|+. +.|++||.++++..+++.+ |.. .|+++.+++++- +++++.|+.|++||.++.++++.+.+
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 254 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHG---AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF 254 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCGGGC---CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC---ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec
Confidence 6777775 6999999999999999998 654 899999986654 78899999999999999999988754
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.18 E-value=9.9e-10 Score=86.55 Aligned_cols=120 Identities=14% Similarity=0.133 Sum_probs=95.6
Q ss_pred CCceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEe-CCC---CCceEEEeee--CCEEEEEeC----CeE
Q psy16020 15 LDTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLP---HHSVRSLAAV--YNKVWCGYK----NKI 83 (151)
Q Consensus 15 ~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~---~~pV~~m~~v--~~~Lw~g~~----n~I 83 (151)
...|.++.+.++ .+++|..||.|.+|+.... +....+.. ..+ ..+|+++.+. ++.|.+|+. +.|
T Consensus 186 ~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i 260 (397)
T 1sq9_A 186 SQFATSVDISERGLIATGFNNGTVQISELSTL-----RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI 260 (397)
T ss_dssp CCCCCEEEECTTSEEEEECTTSEEEEEETTTT-----EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEE
T ss_pred CCCceEEEECCCceEEEEeCCCcEEEEECCCC-----ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceE
Confidence 478999998755 8888899999999987521 22223333 003 4899999996 466888875 589
Q ss_pred EEEeCCCCcEEEEEEe-------------cCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 84 HVVDPKSLVVLKSFDA-------------HPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 84 ~vid~~t~~i~~~~~~-------------h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
++||..+++...++.+ |.. .|.++.+++++ .+++++.|+.|++||.++.+++..+.
T Consensus 261 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 261 TLYETEFGERIGSLSVPTHSSQASLGEFAHSS---WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEETTTCCEEEEECBC--------CCBSBSS---CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCcccceeccCcccccccccccccCC---cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 9999999999999998 764 89999998554 57899999999999999999999997
No 62
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.18 E-value=1.4e-09 Score=87.29 Aligned_cols=131 Identities=11% Similarity=0.000 Sum_probs=97.6
Q ss_pred CCCceeeeeeCCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEE-----eCCCCCceEEEeeeC--C
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-----LGLPHHSVRSLAAVY--N 73 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-----l~~~~~pV~~m~~v~--~ 73 (151)
.+.++...+...+.+.++.+.+ +.+.+|..||+|.+|+...+. ....+. ...+..+|+++.+.. .
T Consensus 195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-----~~~~~~~~~~~~~~h~~~v~~v~~~~~g~ 269 (393)
T 1erj_A 195 RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-----LVERLDSENESGTGHKDSVYSVVFTRDGQ 269 (393)
T ss_dssp TTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC-----EEEEEC------CCCSSCEEEEEECTTSS
T ss_pred CCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----EEEeecccccCCCCCCCCEEEEEECCCCC
Confidence 4566777788888999998864 468889999999999875321 111111 123458999999973 5
Q ss_pred EEEEEe-CCeEEEEeCCC------------CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceee
Q psy16020 74 KVWCGY-KNKIHVVDPKS------------LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 74 ~Lw~g~-~n~I~vid~~t------------~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
.|..|+ ++.|++||.++ +.+..++.+|.+ .|.++.+++++ ..+|++.|+.|++||.++++++.
T Consensus 270 ~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 270 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD---FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp EEEEEETTSEEEEEEC---------------CEEEEEECCSS---CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccC---cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 688777 46899999875 345678888975 89999998665 47899999999999999999887
Q ss_pred eEe
Q psy16020 140 DVD 142 (151)
Q Consensus 140 ~id 142 (151)
.+.
T Consensus 347 ~l~ 349 (393)
T 1erj_A 347 MLQ 349 (393)
T ss_dssp EEE
T ss_pred EEC
Confidence 774
No 63
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.17 E-value=6.9e-10 Score=85.61 Aligned_cols=119 Identities=11% Similarity=0.130 Sum_probs=91.9
Q ss_pred CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CC-EEEEEeC-CeEEEEeC-
Q psy16020 16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YN-KVWCGYK-NKIHVVDP- 88 (151)
Q Consensus 16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~-~Lw~g~~-n~I~vid~- 88 (151)
++|.++.+.+ +.+++|..||.|.+|+....... .....+. .+..+|+++.+. ++ .|++|+. +.|++||.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~--~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN--VDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE--EEEEEEE--ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc--ccceeee--ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 6899999874 47999999999999998632210 0112222 335899999997 45 7888885 68999999
Q ss_pred CCCcEEEEEEe--cCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc---------cceeeeEe
Q psy16020 89 KSLVVLKSFDA--HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT---------YQHLQDVD 142 (151)
Q Consensus 89 ~t~~i~~~~~~--h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t---------~~~l~~id 142 (151)
++++. ..+.+ |.. .|.++.+++...+++++.|+.|++||.++ .+++..+.
T Consensus 88 ~~~~~-~~~~~~~~~~---~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 88 GSPSF-QALTNNEANL---GICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp SSSSE-EECBSCCCCS---CEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred cCCce-EeccccCCCC---ceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence 88876 67777 764 89999999766688999999999999998 77776664
No 64
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.6e-09 Score=85.01 Aligned_cols=124 Identities=10% Similarity=0.152 Sum_probs=86.0
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (151)
Q Consensus 15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~ 89 (151)
.++|.++.+.+ +.+.+|..||+|.+|+......-.........+..+..+|+++.+.. +.|..|+. +.|++||..
T Consensus 58 ~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 36899999875 46888999999999987422110011112234445569999999974 56777774 689999984
Q ss_pred ----CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCcc--ceeeeE
Q psy16020 90 ----SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY--QHLQDV 141 (151)
Q Consensus 90 ----t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~--~~l~~i 141 (151)
..+..+.+.+|.. .|.++.+++++ .++|++.|+.|++||..+. ++++.+
T Consensus 138 ~~~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQ---DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp TTCCCCEEEEEECCCSS---CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred CCCCCeEEEEEeccCCC---ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence 2467788999975 89999998654 5899999999999998764 455544
No 65
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.15 E-value=1.4e-09 Score=93.17 Aligned_cols=132 Identities=11% Similarity=0.051 Sum_probs=102.1
Q ss_pred CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC----CCCCceEEEeeeC----
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG----LPHHSVRSLAAVY---- 72 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~----~~~~pV~~m~~v~---- 72 (151)
.+.++++.+.-+ +.|.++.+++ ++++.|..||+|.+|+... .....+. .+..+|+|+.+..
T Consensus 460 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~--------~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG--------ECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS--------CEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC--------CcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 445666666544 7999999875 4699999999999997531 1222221 2347899999974
Q ss_pred CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 73 NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 73 ~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
..|..|+. +.|++||..+.+..+++.+|.. .|.++.+++++ .++|++.|+.|++||.++.+.+..+.....
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~---~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~ 604 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTG---YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 604 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSC
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcCCCC---CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCc
Confidence 35777774 6899999999999999999975 89999999765 478999999999999999998887754433
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.15 E-value=3.4e-09 Score=82.46 Aligned_cols=125 Identities=13% Similarity=0.032 Sum_probs=96.3
Q ss_pred CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020 14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (151)
Q Consensus 14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~ 88 (151)
....|.++.+.+ +.+++|..||.|.+|+......|. ....+ ...+..+|+++.+.. +.|.+|+. +.|++||.
T Consensus 95 ~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~--~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 95 INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW--VCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE--EEEEE-CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcce--eeeee-ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 346899999864 479999999999999886433221 11111 123358999999974 56888774 68999994
Q ss_pred ------------------CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 89 ------------------KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 89 ------------------~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.+++..+++.+|.. .|.++.+++++ .+++++.|+.|++||.++.+++..+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSSSCG---WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS---CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred ccccccccccccccccccchhhheEecCCCCC---eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 47889999988864 89999998765 6889999999999999999999888643
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.15 E-value=2.4e-09 Score=84.23 Aligned_cols=122 Identities=15% Similarity=0.076 Sum_probs=95.0
Q ss_pred CCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC
Q psy16020 5 HPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK 80 (151)
Q Consensus 5 ~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~ 80 (151)
..+.+..++-+ .+|.++.+.++ .+++|..||.|.+|+.... +.... +..+..+|+++.+.. +.+.+++.
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~~--~~~~~~~i~~~~~~~~~~l~~~~~ 308 (425)
T 1r5m_A 236 EKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG-----NSQNC--FYGHSQSIVSASWVGDDKVISCSM 308 (425)
T ss_dssp CSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-----SCSEE--ECCCSSCEEEEEEETTTEEEEEET
T ss_pred CCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-----ccceE--ecCCCccEEEEEECCCCEEEEEeC
Confidence 34555566544 78999998743 6999999999999987531 12222 333458999999985 47777774
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~ 136 (151)
+.|++||.++++....+..|.. .|.++.+++++ .+++++.|+.|++||.++.+
T Consensus 309 d~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 309 DGSVRLWSLKQNTLLALSIVDGV---PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TSEEEEEETTTTEEEEEEECTTC---CEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred CCcEEEEECCCCcEeEecccCCc---cEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 6899999999999999998864 89999999664 47788999999999999988
No 68
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.15 E-value=3.4e-09 Score=82.29 Aligned_cols=123 Identities=15% Similarity=0.098 Sum_probs=92.4
Q ss_pred CceeeeeeCC-CceeeeEEe----CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----CEEE
Q psy16020 6 PTPYPLNKIL-DTALPPVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVW 76 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~----~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----~~Lw 76 (151)
.+++..++-+ ++|.++.+. ++.+++|..||.|.+|+...+ . ......+..+..+|+++.+.. +.|.
T Consensus 45 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 119 (379)
T 3jrp_A 45 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-R----WSQIAVHAVHSASVNSVQWAPHEYGPLLL 119 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT-E----EEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC-c----eeEeeeecCCCcceEEEEeCCCCCCCEEE
Confidence 3455555533 799999986 568999999999999987531 1 112334444559999999974 4688
Q ss_pred EEeC-CeEEEEeCCCCc--EEEEEEecCCCCCceeEEEEeC--------------CEEEEEEcCCCeEEEEeCCccc
Q psy16020 77 CGYK-NKIHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAG--------------DGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 77 ~g~~-n~I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~--------------~~vwis~~~d~~l~lwd~~t~~ 136 (151)
+|+. +.|++||.++.+ ....+..|.. .|.++.+.+ ....++++.|+.|++||.++.+
T Consensus 120 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 120 VASSDGKVSVVEFKENGTTSPIIIDAHAI---GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp EEETTSEEEEEECCTTSCCCEEEEECCTT---CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT
T ss_pred EecCCCcEEEEecCCCCceeeEEecCCCC---ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC
Confidence 7775 689999999874 4456677764 899999987 4668899999999999998754
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.14 E-value=5.3e-09 Score=86.55 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=100.0
Q ss_pred CceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCC---ceEEEeeeC---CEE
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH---SVRSLAAVY---NKV 75 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~---pV~~m~~v~---~~L 75 (151)
.+++..++-+ +.|.++.+.++ .+++|..||.|.+|+... ......+..+.. +|+++.+.. +.|
T Consensus 150 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (615)
T 1pgu_A 150 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-------FKFSASDRTHHKQGSFVRDVEFSPDSGEFV 222 (615)
T ss_dssp CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT-------BEEEEEECSSSCTTCCEEEEEECSTTCCEE
T ss_pred CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC-------cceeeeecccCCCCceEEEEEECCCCCCEE
Confidence 3455555544 68999999776 699999999999998642 111223443446 999999974 468
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEE-E---ecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSF-D---AHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~-~---~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.+|+. +.|++||.++++..+++ . .|.. .|.++.++....+++++.|+.|++||.++.+.++.+...
T Consensus 223 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 223 ITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG---GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp EEEETTCCEEEEETTTCCEEEECCBTTBCCCS---CEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEeCCCeEEEEECCCCCEeEEecccccccCC---ceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 87775 68999999999999999 5 6764 899999984445889999999999999999999988765
No 70
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.14 E-value=1e-08 Score=80.48 Aligned_cols=126 Identities=10% Similarity=0.055 Sum_probs=93.4
Q ss_pred CCCceeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCCCceEEEeeeC-----
Q psy16020 4 PHPTPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPHHSVRSLAAVY----- 72 (151)
Q Consensus 4 ~~~~~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~~pV~~m~~v~----- 72 (151)
.+.+++..++- +++|.++.+.+ +++++|..||+|.+|+... ....... .+..+|+|+.+..
T Consensus 106 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 106 RTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG--------ECKFSSAEKENHSDWVSCVRYSPIMKSA 177 (343)
T ss_dssp TSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS--------CEEEECCTTTSCSSCEEEEEECCCCCSC
T ss_pred CCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC--------CceeeeecccCCCceeeeeeeccccccc
Confidence 45567777764 47999999974 4799999999999998741 1122222 3447899998864
Q ss_pred -------CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020 73 -------NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT-YQHLQDV 141 (151)
Q Consensus 73 -------~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t-~~~l~~i 141 (151)
..+..|+ ++.|++|| .+.+...++.+|.. .|.++.+++++ .+++++.|+.|++||..+ ......+
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~---~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~ 252 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHES---NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF 252 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSS---CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE
T ss_pred cccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccc---cceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee
Confidence 3577776 46999999 56788889999975 89999999776 478999999999999943 3344443
No 71
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.12 E-value=3.7e-09 Score=81.56 Aligned_cols=114 Identities=12% Similarity=0.077 Sum_probs=86.9
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEe-CCeEEEEe
Q psy16020 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGY-KNKIHVVD 87 (151)
Q Consensus 15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~-~n~I~vid 87 (151)
.++|.++.+.+ +++.+|..||+|.+|+..... . + ....+..+..||+++.+. ++.|..|+ +++|++||
T Consensus 9 ~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~--~--~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-H--K--LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-B--C--CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred cCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-c--E--EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 36899998864 579999999999999975311 1 1 122444556999999985 35677777 46999999
Q ss_pred CCCCc--EEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccc
Q psy16020 88 PKSLV--VLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 88 ~~t~~--i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~ 136 (151)
.++++ ....+.+|+. .|.++.++++ ..+++++.|+.|++||.++.+
T Consensus 84 ~~~~~~~~~~~~~~h~~---~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSA---SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp BSSSCBCCCEEECCCSS---CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred cCCCceEEEEEeecCCC---ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 99874 5566777864 8999999874 468899999999999998653
No 72
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.12 E-value=1.4e-08 Score=80.04 Aligned_cols=131 Identities=12% Similarity=0.122 Sum_probs=99.6
Q ss_pred CCCCceeeeeeCCCceeeeEEeC--CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~ 77 (151)
..+.++++.+..+..|.++.+.+ +++|++.. +|.|.+|+...+ +....+.. ...+.++.+.. +.||+
T Consensus 61 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~-----~~~~~~~~---~~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 61 TATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN-----TVAGTVKT---GKSPLGLALSPDGKKLYV 132 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-----EEEEEEEC---SSSEEEEEECTTSSEEEE
T ss_pred CCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCC-----eEEEEEeC---CCCcceEEECCCCCEEEE
Confidence 35678888999999999999974 46877664 599999987521 12222332 25678888863 46875
Q ss_pred Ee--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 78 GY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 78 g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
++ ++.|++||+.+++..+.+..|. .+..+.+++++ +|++.+.++.|++||.++.+....+....
T Consensus 133 ~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 200 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKAVINTVSVGR----SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA 200 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECCS----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred EeCCCCEEEEEECCCCcEEEEEecCC----CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC
Confidence 55 3689999999999999998764 57888888554 67899999999999999999888876543
No 73
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.12 E-value=7.1e-10 Score=87.06 Aligned_cols=133 Identities=7% Similarity=0.002 Sum_probs=95.4
Q ss_pred CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCcce---EEEeCCCCCceEEEeeeC----CEEEE
Q psy16020 6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYH---TVTLGLPHHSVRSLAAVY----NKVWC 77 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~---~i~l~~~~~pV~~m~~v~----~~Lw~ 77 (151)
.+++..++ ..+|.++.+++. ++.|..||+|.+|+.... ..|++...+ .+..+. ..+|.++.+.. +.+..
T Consensus 68 ~~~~~~~~-~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s 144 (343)
T 3lrv_A 68 SKTITTIT-TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS-ANEIIYMYGHNEVNTEYFIW 144 (343)
T ss_dssp SSCEEEEE-EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC-SSCEEEEECCC---CCEEEE
T ss_pred CcEEEEEe-cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC-CCCEEEEEcCCCCCCCEEEE
Confidence 44455554 356777777776 888888899999876421 125554444 333433 47899999864 45665
Q ss_pred Ee-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcccee-eeEeC
Q psy16020 78 GY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHL-QDVDI 143 (151)
Q Consensus 78 g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l-~~idi 143 (151)
|+ ++.|++||.++++..+.+..+.. ..|.++.+++++- +++++.|+.|++||.++.+.+ ..+..
T Consensus 145 ~s~dg~i~~wd~~~~~~~~~~~~~~~--~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~ 211 (343)
T 3lrv_A 145 ADNRGTIGFQSYEDDSQYIVHSAKSD--VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV 211 (343)
T ss_dssp EETTCCEEEEESSSSCEEEEECCCSS--CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred EeCCCcEEEEECCCCcEEEEEecCCC--CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence 66 46899999999999777765543 4699999998766 666799999999999998877 66654
No 74
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.11 E-value=1.7e-08 Score=79.58 Aligned_cols=131 Identities=17% Similarity=0.175 Sum_probs=100.6
Q ss_pred CCCCceeeeeeCCCceeeeEEeCC--eEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEE
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQG--RVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~~--~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~ 77 (151)
..+.++++.++.+..+.++.+.++ ++|++ ..||+|.+|+...+ +....+..+ .+++++.+. ++.|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-----~~~~~~~~~---~~v~~~~~spdg~~l~~ 90 (391)
T 1l0q_A 19 VTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN-----NVIATVPAG---SSPQGVAVSPDGKQVYV 90 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-----EEEEEEECS---SSEEEEEECTTSSEEEE
T ss_pred CCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC-----eEEEEEECC---CCccceEECCCCCEEEE
Confidence 346678888998888999999754 57554 47999999987421 122233332 588999997 356887
Q ss_pred Ee--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 78 GY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 78 g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
++ ++.|++||+++++....+..|. .+..+.++++ .++++.+.++.|++||..+.+.+..+....
T Consensus 91 ~~~~~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVAGTVKTGK----SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred EECCCCEEEEEECCCCeEEEEEeCCC----CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 76 3699999999999999998663 6899999855 567899999999999999999888876543
No 75
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.11 E-value=4.7e-09 Score=89.94 Aligned_cols=120 Identities=18% Similarity=0.178 Sum_probs=91.9
Q ss_pred eeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCe
Q psy16020 10 PLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNK 82 (151)
Q Consensus 10 ~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~ 82 (151)
..++-+ +.|.+|.+.. +.++.|..||+|.+|+...+.. .. ......+..+..+|+++.+.. +.|..|+ ++.
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~-~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK-AY-GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT-CS-CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc-cc-ccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 345544 7999999863 3588899999999999864321 11 111223444569999999974 5677777 468
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t 134 (151)
|++||..+++..+++.+|+. .|.++.+++++- .+|++.|++|++||...
T Consensus 454 v~vwd~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTK---DVLSVAFSLDNRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp EEEEETTTTEEEEEEECCSS---CEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred EEEEECCCCcceeEEeCCCC---CEEEEEEeCCCCEEEEEeCCCEEEEEECCC
Confidence 99999999999999999975 899999996654 88999999999999864
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.11 E-value=6.3e-09 Score=83.01 Aligned_cols=122 Identities=10% Similarity=0.154 Sum_probs=93.7
Q ss_pred ceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEe--CCCCCceEEEeeeC--CEEEEE
Q psy16020 7 TPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTL--GLPHHSVRSLAAVY--NKVWCG 78 (151)
Q Consensus 7 ~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l--~~~~~pV~~m~~v~--~~Lw~g 78 (151)
+++..++-+ +.|.++.++++ .+++|..||+|.+|+...+ .....+ ..+..+|+++.+.. +.|.+|
T Consensus 122 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 122 EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG-------AAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT-------EEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC-------CccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 556666644 79999999754 6888999999999987521 122344 44568999999973 568888
Q ss_pred eC-CeEEEEeCCCCcEEEEE-EecCCCCCceeEEEEeCCEEEEE-E---cCCCeEEEEeCCccce
Q psy16020 79 YK-NKIHVVDPKSLVVLKSF-DAHPRRESQVRQMTWAGDGVWVS-I---RLDSTLRMYNAHTYQH 137 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~-~~h~~~~~~I~~m~~~~~~vwis-~---~~d~~l~lwd~~t~~~ 137 (151)
+. +.|++||+++++..+++ .+|.. ..+.++.+++++-+++ + +.|+.|++||.++.+.
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKDRPHEG--TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCS--SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred ecCCcEEEEeCCCCceeeeeccCCCC--CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 85 68999999999999999 67754 3588899987776444 4 5899999999998664
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.11 E-value=5.1e-09 Score=94.41 Aligned_cols=118 Identities=14% Similarity=0.169 Sum_probs=96.1
Q ss_pred CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020 15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (151)
Q Consensus 15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~ 89 (151)
.+.|.++.+.++ .+.+|..||+|.+|+...+ .....+..+..+|+|+.+.. +.|.+|+. +.|++||..
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~-------~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETG-------EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 379999999754 6888999999999987532 12334545569999999974 56777775 689999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeC--C-EEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAG--D-GVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~--~-~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+++..+++.+|.. .|.++.+++ + .+.++++.|+.|++||..+.+.+..+.
T Consensus 688 ~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~ 740 (1249)
T 3sfz_A 688 TGKLVHTYDEHSE---QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF 740 (1249)
T ss_dssp TCCEEEEEECCSS---CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred CCceEEEEcCCCC---cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence 9999999999975 899999986 3 358899999999999999998887663
No 78
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.11 E-value=1.2e-08 Score=80.54 Aligned_cols=130 Identities=7% Similarity=-0.028 Sum_probs=96.5
Q ss_pred CceeeeeeC-CCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEE
Q psy16020 6 PTPYPLNKI-LDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCG 78 (151)
Q Consensus 6 ~~~l~~i~l-~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g 78 (151)
.+....+.- ++.|.++.+.++ .+++|..||+|.+|+.... +....+.+..+..+|+++.+.. +.|.+|
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ-----NKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST-----TCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc-----ccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 444555543 379999999764 6999999999999998632 2333444434569999999975 357777
Q ss_pred eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+. +.|++||.++ +..+.+..|......|.++.+++++ .+++++.|+.|++||.+ .+.+..+.
T Consensus 138 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~ 201 (383)
T 3ei3_B 138 SIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK 201 (383)
T ss_dssp ETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEE
T ss_pred eCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEec
Confidence 64 6899999996 6667777776555689999999654 48899999999999994 66666653
No 79
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1.8e-09 Score=85.34 Aligned_cols=129 Identities=13% Similarity=0.105 Sum_probs=98.9
Q ss_pred CCCceeeeeeC-------CCceeeeEEeCC---eEEEEecCC---cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee
Q psy16020 4 PHPTPYPLNKI-------LDTALPPVHVQG---RVVCALADG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA 70 (151)
Q Consensus 4 ~~~~~l~~i~l-------~~~V~~i~~~~~---~v~vgl~nG---~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~ 70 (151)
.+.+++..++. ..+|.++.+.++ .+++|..|| .|.+|+...... ....+.. .+..+|+++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~----~~~~~~~-~~~~~v~~~~~ 270 (416)
T 2pm9_A 196 KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT----PLQTLNQ-GHQKGILSLDW 270 (416)
T ss_dssp TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS----CSBCCCS-CCSSCEEEEEE
T ss_pred CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC----CcEEeec-CccCceeEEEe
Confidence 45566777776 468999999864 588888888 999999864221 1111221 33589999999
Q ss_pred eC---CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeee
Q psy16020 71 VY---NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 71 v~---~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
.. +.|.+|+. +.|++||.++++..+++.+|.. .|.++.+++++ .+++++.|+.|++||..+.+..+.
T Consensus 271 s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 343 (416)
T 2pm9_A 271 CHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN---WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLD 343 (416)
T ss_dssp CSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS---CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred CCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC---ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence 63 45777774 6999999999999999999975 89999999765 789999999999999998765544
No 80
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.10 E-value=7.4e-09 Score=81.11 Aligned_cols=135 Identities=10% Similarity=0.072 Sum_probs=109.5
Q ss_pred CCCCCceeeeeeCCCceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020 2 EYPHPTPYPLNKILDTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG 78 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~~V~~--i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g 78 (151)
+..+.+.++++ |+...+. |...+++||++.- ++.+.+|+.. +++....++.+. ++. .++.-+++||++
T Consensus 81 D~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~-----Tl~~~~ti~~~~--eGw-GLt~Dg~~L~vS 151 (268)
T 3nok_A 81 SLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGM-----PPQRERTTRYSG--EGW-GLCYWNGKLVRS 151 (268)
T ss_dssp CSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETT-----TTEEEEEEECSS--CCC-CEEEETTEEEEE
T ss_pred ECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECC-----cCcEEEEEeCCC--cee-EEecCCCEEEEE
Confidence 45678889999 9988776 8888999999853 6789999976 455666777754 443 445567899999
Q ss_pred eC-CeEEEEeCCCCcEEEEEEecCCC--CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 79 YK-NKIHVVDPKSLVVLKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~~~h~~~--~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
.+ ++|+++|++|+++++++++..+. -..++.|.+.+..+|+..-.+..|.+-|++|++.+..||++.
T Consensus 152 dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 152 DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence 96 69999999999999999975432 235788899888899999999999999999999999999873
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.10 E-value=2.6e-09 Score=90.28 Aligned_cols=122 Identities=12% Similarity=0.147 Sum_probs=90.2
Q ss_pred CceeeeEEeCC--------eEEEEecCCcEEEEEcCCCCCC-----CCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC-
Q psy16020 16 DTALPPVHVQG--------RVVCALADGSVAIFRRGPDGQW-----DLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK- 80 (151)
Q Consensus 16 ~~V~~i~~~~~--------~v~vgl~nG~l~v~~~~~~~~w-----d~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~- 80 (151)
+.|.++.+.+. .+..|..||+|.+|+...+..- ....+ ...+..+..+|+|+.+.. +.|.+|+.
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p-~~~l~~h~~~v~sv~~s~~~~lasgs~D 286 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP-SLTLSLADSLITTFDFLSPTTVVCGFKN 286 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC-SEEECCTTTCEEEEEESSSSEEEEEETT
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc-eEEEEcCCCCEEEEEecCCCeEEEEeCC
Confidence 67899998763 6777899999999998643210 01111 123444459999999864 67888886
Q ss_pred CeEEEEeCCCCc-EEEEEEecCCCCCceeEE--EEeCC--EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 81 NKIHVVDPKSLV-VLKSFDAHPRRESQVRQM--TWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 81 n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m--~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+.|.+||.++++ ....+.+|+. .|.++ .++++ .+++|++.|++|+|||.++.++++.+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~---~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~ 349 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDS---YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT 349 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSS---CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE
T ss_pred CEEEEEECCCCCCceEEeecccc---cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc
Confidence 699999999774 4567889975 89999 44565 47899999999999999987765443
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.09 E-value=6.2e-09 Score=89.46 Aligned_cols=118 Identities=19% Similarity=0.178 Sum_probs=94.0
Q ss_pred CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020 14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (151)
Q Consensus 14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~ 88 (151)
-++.|.++.++++ .+.+|..||.|.+|+...+ .....+. .+..||+++.+.. +.|.+|+. +.|++||.
T Consensus 12 h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-----~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-----VEVRSIQ--VTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----EEEEEEE--CCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred CCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-----ceEEEEe--cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 3479999999754 6999999999999987521 1222333 3459999999974 66888875 68999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCcc-ceeeeE
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY-QHLQDV 141 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~-~~l~~i 141 (151)
++++...++.+|.. .|.++.+++++ .+++++.|+.|++||..+. +..+.+
T Consensus 85 ~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 85 NTGEKVVDFEAHPD---YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp TTCCEEEEEECCSS---CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE
T ss_pred CCCcEEEEEecCCC---CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE
Confidence 99999999999975 89999999776 4789999999999999986 444444
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.08 E-value=5.3e-09 Score=84.31 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=85.1
Q ss_pred CCceeeeEEeCC---eEEEE--ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC---CeEE
Q psy16020 15 LDTALPPVHVQG---RVVCA--LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK---NKIH 84 (151)
Q Consensus 15 ~~~V~~i~~~~~---~v~vg--l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~---n~I~ 84 (151)
..+|.++.+.+. .+.+| ..||+|.+|+...+ .....+.. ..++.++... ++.+.+++| +.|+
T Consensus 276 ~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~-----~~~~~~~~---~~~v~~~~~~~~~~~lv~~sg~~d~~I~ 347 (420)
T 4gga_A 276 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-----ACLSAVDA---HSQVCSILWSPHYKELISGHGFAQNQLV 347 (420)
T ss_dssp SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT-----EEEEEEEC---SSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-----ccceeecc---ccceeeeeecCCCCeEEEEEecCCCEEE
Confidence 368888888653 34443 36899999987521 11122222 2677777776 467887763 6899
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+||..+++...+|.+|+. .|.+|+++++| .++|++.|++|++||..+.++.++.
T Consensus 348 iwd~~~~~~v~~l~gH~~---~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~ 402 (420)
T 4gga_A 348 IWKYPTMAKVAELKGHTS---RVLSLTMSPDGATVASAAADETLRLWRCFELDPARRR 402 (420)
T ss_dssp EEETTTCCEEEEECCCSS---CEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---
T ss_pred EEECCCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchh
Confidence 999999999999999975 89999999776 4889999999999999877665554
No 84
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.08 E-value=6.8e-09 Score=80.15 Aligned_cols=126 Identities=6% Similarity=-0.058 Sum_probs=98.6
Q ss_pred CceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK 80 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~ 80 (151)
.+.+..+..+ .+|.++.+.+ +.+++|..||.|.+|+.... +....+. ...+++++.+.. ..+++|++
T Consensus 208 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 208 YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL-----QVLKKYE---TDCPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CEEEEEE---CSSCEEEEEECSSSSEEEEEEC
T ss_pred cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC-----ceeeeec---CCCCceeEEecCCCceEEEeec
Confidence 5667777755 7899999864 46889999999999987521 2223333 238899999873 66888775
Q ss_pred -C--------------eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 81 -N--------------KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 -n--------------~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+ .|++||..+++....+.+|.. .|+++.+++++ .+++++.|+.|++||.++......++
T Consensus 280 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 354 (369)
T 3zwl_B 280 QEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG---PLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYD 354 (369)
T ss_dssp CC-------------CEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCCH
T ss_pred CCCceEEEEecCCCcceeEEEecCCCcchhheecccC---cEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHHH
Confidence 3 799999999999999999975 89999999664 58899999999999999876655554
No 85
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.08 E-value=4.7e-09 Score=82.75 Aligned_cols=125 Identities=13% Similarity=0.147 Sum_probs=93.3
Q ss_pred CCceeeeeeCC-C-ceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020 5 HPTPYPLNKIL-D-TALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG 78 (151)
Q Consensus 5 ~~~~l~~i~l~-~-~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g 78 (151)
..++++.++-+ + .|.+|.+.++ .+.+|..||+|.+|+...+ .| .........+..+|+++.+.. +.|..|
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~-~~---~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 79 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD-SW---ICKSVLSEGHQRTVRKVAWSPCGNYLASA 79 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT-EE---EEEEEECSSCSSCEEEEEECTTSSEEEEE
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC-cc---eeeeeeccccCCcEEEEEECCCCCEEEEE
Confidence 34667777643 5 8999999754 6888999999999987421 11 011222234568999999974 568877
Q ss_pred eC-CeEEEEeCCCC--cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020 79 YK-NKIHVVDPKSL--VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 79 ~~-n~I~vid~~t~--~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~ 136 (151)
+. +.|++||..+. +...++.+|+. .|.++.+++++ .+++++.|+.|++||.++.+
T Consensus 80 s~D~~v~iw~~~~~~~~~~~~~~~h~~---~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 80 SFDATTCIWKKNQDDFECVTTLEGHEN---EVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138 (345)
T ss_dssp ETTSCEEEEEECCC-EEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEEECTTS
T ss_pred ECCCcEEEEEccCCCeEEEEEccCCCC---CceEEEEeCCCCEEEEEECCCeEEEEECCCCC
Confidence 74 68999998766 46788999975 89999999665 58899999999999998654
No 86
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.08 E-value=6.2e-09 Score=86.10 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=88.4
Q ss_pred CceeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020 6 PTPYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK 80 (151)
Q Consensus 6 ~~~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~ 80 (151)
.+++..+.- +++|.++.+.++ .+.+|..||+|.+|+.. | +..+ .+..+..+|+++.+.. ..|..|+.
T Consensus 457 ~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~----~~~~--~~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 457 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--G----QLLQ--TLTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--S----CEEE--EEECCSSCEEEEEECTTSSCEEEEET
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--C----CEEE--EEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 455666654 479999998754 68888999999999853 2 2222 3333458999999974 45777775
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEe
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYN 131 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd 131 (151)
+.|++||. +++..+++.+|+. .|.++.+++++- ++|++.|+.|++||
T Consensus 529 dg~v~lwd~-~~~~~~~~~~h~~---~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 529 DKTVKLWNR-NGQLLQTLTGHSS---SVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSEEEEECT-TSCEEEEEECCSS---CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cCEEEEEeC-CCCEEEEEcCCCC---CEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 58999995 7889999999975 899999997764 78999999999998
No 87
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.08 E-value=6.2e-09 Score=84.40 Aligned_cols=132 Identities=11% Similarity=0.068 Sum_probs=96.6
Q ss_pred CceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCC--CCCCcceEEEeCCCCCceEEEeeeC---CEEE
Q psy16020 6 PTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQ--WDLSKYHTVTLGLPHHSVRSLAAVY---NKVW 76 (151)
Q Consensus 6 ~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~--wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw 76 (151)
.+++..++-+ +.|.+|.+.++ .+++|..||+|.+|+....+. +.+... ..+..+..+|.++.+.. +.+.
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~h~~~v~~v~~~p~~~~~l~ 248 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAK--NIFTGHTAVVEDVAWHLLHESLFG 248 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECS--EEECCCSSCEEEEEECSSCTTEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccc--eeecCCCCCEeeeEEeCCCCCEEE
Confidence 3455566544 68999998754 788999999999999875321 111111 12333458999999963 4466
Q ss_pred EEe-CCeEEEEeCCCC---cEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc-cceeeeEe
Q psy16020 77 CGY-KNKIHVVDPKSL---VVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT-YQHLQDVD 142 (151)
Q Consensus 77 ~g~-~n~I~vid~~t~---~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t-~~~l~~id 142 (151)
+++ +++|++||.++. +....+.+|.. .|++|.+.+++ ++++++.|+.|++||.++ .+++..+.
T Consensus 249 s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 249 SVADDQKLMIWDTRNNNTSKPSHTVDAHTA---EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp EEETTSEEEEEETTCSCSSSCSEEEECCSS---CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred EEeCCCeEEEEECCCCCCCcceeEeecCCC---CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee
Confidence 666 469999999987 57778888864 89999999655 788999999999999998 55566654
No 88
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.07 E-value=3.3e-09 Score=94.59 Aligned_cols=133 Identities=12% Similarity=0.080 Sum_probs=101.1
Q ss_pred CCCCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE--------EeCCCCCceEEEeeeC
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV--------TLGLPHHSVRSLAAVY 72 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i--------~l~~~~~pV~~m~~v~ 72 (151)
..+.+++..++.++.|.++.+.+ +.+++|..||+|.+|+...... .+..+ .+..+..+|+++.+..
T Consensus 86 ~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~----~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 86 LYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL----SSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp TTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE----EEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred CCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc----ccceeccccccccccccCCCCeEEEEEcc
Confidence 34567888888888999999865 4799999999999998753210 00111 1123458999999985
Q ss_pred ---CEEEEEeC-CeEEEEeCCCCcEEEEEEecCC---------------CCCceeEEEEeCCE-EEEEEcCCCeEEEEeC
Q psy16020 73 ---NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPR---------------RESQVRQMTWAGDG-VWVSIRLDSTLRMYNA 132 (151)
Q Consensus 73 ---~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~---------------~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~ 132 (151)
+.|.+|++ +.| +||.++++..+++..|.. ....|+++.++++| .+++++.|+.|++||.
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 35778875 578 999999999999987711 02469999999776 4889999999999999
Q ss_pred Cccceeee
Q psy16020 133 HTYQHLQD 140 (151)
Q Consensus 133 ~t~~~l~~ 140 (151)
+++++++.
T Consensus 241 ~~g~~~~~ 248 (902)
T 2oaj_A 241 NSGHMIMA 248 (902)
T ss_dssp TTCCEEEE
T ss_pred CCCcEEEE
Confidence 99887764
No 89
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.07 E-value=1.9e-08 Score=78.65 Aligned_cols=136 Identities=8% Similarity=0.128 Sum_probs=109.8
Q ss_pred CCCCCceeeeeeCCCceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020 2 EYPHPTPYPLNKILDTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG 78 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~~V~~--i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g 78 (151)
+..+.+.+.++.++...+. |...+++||++.- ++.+.+|+.. +++....++.+. ++. .+..-+++||.+
T Consensus 71 D~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~-----t~~~~~ti~~~~--eG~-glt~dg~~L~~S 142 (262)
T 3nol_A 71 DIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR-----NLRQVRSFNYDG--EGW-GLTHNDQYLIMS 142 (262)
T ss_dssp CTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-----TCCEEEEEECSS--CCC-CEEECSSCEEEC
T ss_pred ECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc-----cCcEEEEEECCC--Cce-EEecCCCEEEEE
Confidence 3467889999999988766 7888999999974 6789999986 455666777754 443 333446789999
Q ss_pred eC-CeEEEEeCCCCcEEEEEEecCC--CCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 79 YK-NKIHVVDPKSLVVLKSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 79 ~~-n~I~vid~~t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
.+ ++|+++|++|+++++++++..+ +-..++.|.+.+..+|+..-.+..|.+.|++|++.+..||++.
T Consensus 143 dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 143 DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence 86 6899999999999999998532 1235677888888899999999999999999999999999864
No 90
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.07 E-value=2.1e-08 Score=77.56 Aligned_cols=135 Identities=10% Similarity=0.121 Sum_probs=109.4
Q ss_pred CCCCceeeeeeCCCceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020 3 YPHPTPYPLNKILDTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~--i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~ 79 (151)
..+.+.+.+++++..++. |...++++|+..- +|.+.+|+.. +++....++.+. .+. .+..-+++||++.
T Consensus 50 ~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~-----tl~~~~ti~~~~--~Gw-glt~dg~~L~vSd 121 (243)
T 3mbr_X 50 LETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA-----TLTPRARFRYPG--EGW-ALTSDDSHLYMSD 121 (243)
T ss_dssp TTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-----TTEEEEEEECSS--CCC-EEEECSSCEEEEC
T ss_pred CCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC-----cCcEEEEEeCCC--Cce-EEeeCCCEEEEEC
Confidence 457789999999987754 4777899999852 6789999986 455666777765 554 4455578899998
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCC--CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~--~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
| ++|+++|++|+++++++++..+. -..++.|.+.+..+|+..-.+..|.+-|++|++.+..||++.
T Consensus 122 gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 122 GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGG
T ss_pred CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCc
Confidence 7 58999999999999999975432 236788999988899999899999999999999999999774
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.07 E-value=8.2e-09 Score=93.05 Aligned_cols=132 Identities=16% Similarity=0.146 Sum_probs=104.3
Q ss_pred CCCCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C--EE
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N--KV 75 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~--~L 75 (151)
..+.+++..++-+ +.|.++.+.++ .+.+|..||+|.+|+...+ +... .+..+..+|.|+.+.. + .+
T Consensus 644 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~-----~~~~--~~~~~~~~v~~~~~~~~~~~~~l 716 (1249)
T 3sfz_A 644 AETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG-----KLVH--TYDEHSEQVNCCHFTNKSNHLLL 716 (1249)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CEEE--EEECCSSCEEEEEECSSSSCCEE
T ss_pred CCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC-----ceEE--EEcCCCCcEEEEEEecCCCceEE
Confidence 3556777888754 79999999754 7899999999999987532 1222 3333459999999974 3 35
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
..|+. +.|++||.++++...++.+|.. .|+++.+++++ .+++++.|+.|++||.++.+....+...
T Consensus 717 ~sg~~d~~v~vwd~~~~~~~~~~~~h~~---~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 784 (1249)
T 3sfz_A 717 ATGSNDFFLKLWDLNQKECRNTMFGHTN---SVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVK 784 (1249)
T ss_dssp EEEETTSCEEEEETTSSSEEEEECCCSS---CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECC
T ss_pred EEEeCCCeEEEEECCCcchhheecCCCC---CEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceeccc
Confidence 55654 6899999999999999999975 89999999665 5889999999999999999988888654
No 92
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.06 E-value=3.3e-09 Score=84.70 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=90.9
Q ss_pred CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe---CCCCCceEEEeee---CCEEEEEe-CCeEEE
Q psy16020 16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAV---YNKVWCGY-KNKIHV 85 (151)
Q Consensus 16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l---~~~~~pV~~m~~v---~~~Lw~g~-~n~I~v 85 (151)
+.|.++.+.+ .+++.|..||+|.+|+...+. ....+.. ..+..+|.++.+. ++.+..|+ ++.|++
T Consensus 158 ~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~ 232 (380)
T 3iz6_a 158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ-----RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL 232 (380)
T ss_dssp SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC-----EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEE
T ss_pred cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc-----EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEE
Confidence 4667777654 369999999999999865321 1111111 2235889999885 35577666 468999
Q ss_pred EeCC-CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 86 VDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 86 id~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
||.+ +.+..+++.+|.. .|+++.+++++ .++|++.|++|++||.++.+.++.++..
T Consensus 233 wd~~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 233 WDLRITSRAVRTYHGHEG---DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp EETTTTCCCCEEECCCSS---CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred EECCCCCcceEEECCcCC---CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence 9998 5678899999975 89999999775 4889999999999999999988877644
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.06 E-value=3e-09 Score=82.88 Aligned_cols=113 Identities=17% Similarity=0.124 Sum_probs=86.7
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEe-CCeEEEEe
Q psy16020 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGY-KNKIHVVD 87 (151)
Q Consensus 15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~-~n~I~vid 87 (151)
.++|.++.+. ++++.+|..||+|.+|+...++ ......+..+..+|+++.+. ++.|..|+ +++|++||
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-----~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-----QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-----EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-----cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 4799999986 4579999999999999875321 11123444556999999985 35677777 46899999
Q ss_pred CCCCc--EEEEEEecCCCCCceeEEEEeCC--E-EEEEEcCCCeEEEEeCCcc
Q psy16020 88 PKSLV--VLKSFDAHPRRESQVRQMTWAGD--G-VWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 88 ~~t~~--i~~~~~~h~~~~~~I~~m~~~~~--~-vwis~~~d~~l~lwd~~t~ 135 (151)
.++++ ...++.+|+. .|+++.++++ + .+++++.|+.|++||.++.
T Consensus 88 ~~~~~~~~~~~~~~h~~---~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDS---SVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CSSSCCCEEEEECCCSS---CCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred CCCCcceEEEEccCCCC---ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 99874 6667888875 8999999875 3 5889999999999999865
No 94
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.05 E-value=7.2e-09 Score=80.57 Aligned_cols=117 Identities=10% Similarity=0.061 Sum_probs=90.1
Q ss_pred CCceeeeEEeCC--eEEEEecCCcEEEEEcCCC--------CCCCC--Ccce-EEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020 15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPD--------GQWDL--SKYH-TVTLGLPHHSVRSLAAVY--NKVWCGY 79 (151)
Q Consensus 15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~--------~~wd~--~~~~-~i~l~~~~~pV~~m~~v~--~~Lw~g~ 79 (151)
.+.|.+|.+.++ .+++|..||.|.+|+.... ..|.. .... ...+..+..+|+++.+.. +.|++|+
T Consensus 142 ~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 221 (372)
T 1k8k_C 142 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS 221 (372)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE
T ss_pred CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe
Confidence 468999998754 6888999999999995311 11211 1112 234444558999999964 5788888
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t 134 (151)
. +.|++||.++++..+++..|.. .|.++.+++++-+++.+.|+.|++||..+
T Consensus 222 ~d~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 222 HDSTVCLADADKKMAVATLASETL---PLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp TTTEEEEEEGGGTTEEEEEECSSC---CEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred CCCEEEEEECCCCceeEEEccCCC---CeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 5 6899999999999999998864 89999999877777777999999999987
No 95
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.05 E-value=2.2e-08 Score=76.84 Aligned_cols=116 Identities=8% Similarity=0.045 Sum_probs=90.7
Q ss_pred CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020 16 DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (151)
Q Consensus 16 ~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~ 88 (151)
+.|.++.+..+ .++.|..||.|.+|+.... .....+..+..+|+++.+.. +.|..|+. +.|++||.
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~-------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC-------KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred CcccceEEccCCCCcEEEEEcCCCEEEEEECCCC-------ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence 57777776532 4667788999999987521 12223444568999999974 56777774 68999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.+.+..+.+..+. .|.++.+++++.+++++.|+.|++||.++.+.+.++.
T Consensus 245 ~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 294 (340)
T 4aow_A 245 NEGKHLYTLDGGD----IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK 294 (340)
T ss_dssp TTTEEEEEEECSS----CEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEC
T ss_pred ccCceeeeecCCc----eEEeeecCCCCceeeccCCCEEEEEECCCCeEEEecc
Confidence 9999999998663 7999999988889999999999999999988877764
No 96
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.04 E-value=3.9e-09 Score=82.78 Aligned_cols=124 Identities=12% Similarity=0.098 Sum_probs=81.1
Q ss_pred CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--C-CEEEEEeCCeEEEEeCC
Q psy16020 15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--Y-NKVWCGYKNKIHVVDPK 89 (151)
Q Consensus 15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~-~~Lw~g~~n~I~vid~~ 89 (151)
..+|.++.+.++ .+++|..||.|.+|+......- ...... .......++...... . .-++++.++.|++||..
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~ 322 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT-LVNYGK-VCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVY 322 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC-CCCCCC-CCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETT
T ss_pred cCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc-eecccc-ccccccccceeEEecCCCceEEEEecCCEEEEEECc
Confidence 368999998654 7999999999999998643210 000000 001111222222222 2 34555567899999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
+++...++.+|.. .|.++.+++++ .+++++.|+.|++||.++++++..++-
T Consensus 323 ~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 374 (408)
T 4a11_B 323 SGEQITMLKGHYK---TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE 374 (408)
T ss_dssp TCCEEEEECCCSS---CEEEEEEETTTTEEEEEETTSCEEEEEECC---------
T ss_pred CCcceeeeccCCC---eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence 9999999999975 89999999764 578999999999999999998887653
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.04 E-value=8.6e-09 Score=80.78 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=88.2
Q ss_pred CCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-----CEEEEEeC-CeEE
Q psy16020 14 ILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-----NKVWCGYK-NKIH 84 (151)
Q Consensus 14 l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-----~~Lw~g~~-n~I~ 84 (151)
...+|.++.+.+ +.+++|..||.|.+|+.... +....+. ...++.++.... ..+.+|+. +.|+
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL-----QTADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPKVQ 169 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT-----EEEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSSEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC-----ccceecc---CCCceeeeEeecCCCCCcEEEEEcCCCeEE
Confidence 457999999976 36888888999999987521 1222233 237888888863 26777775 6899
Q ss_pred EEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccc
Q psy16020 85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~ 136 (151)
+||.++++..+.+.+|.. .|.++.+++++ ++++++.|+.|++||.++.+
T Consensus 170 ~~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 170 LCDLKSGSCSHILQGHRQ---EILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp EEESSSSCCCEEECCCCS---CEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred EEeCCCcceeeeecCCCC---cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 999999999999999875 89999999776 68899999999999998755
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.04 E-value=2.3e-09 Score=85.67 Aligned_cols=119 Identities=6% Similarity=0.086 Sum_probs=86.5
Q ss_pred CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCC----CC----------------CCcce-------------EEEe
Q psy16020 16 DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQ----WD----------------LSKYH-------------TVTL 58 (151)
Q Consensus 16 ~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~----wd----------------~~~~~-------------~i~l 58 (151)
++|.+|.+.++ .+++|..||+|.+|+...... ++ +..+. ..-.
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 78999999764 699999999999998752110 00 00110 0112
Q ss_pred CCCCCceEEEeeeC--CEEEEEeCCeEEEEeCC-CCcEEEE-------EEecCCCCCceeEEEEeCCE--EEEEEcCCCe
Q psy16020 59 GLPHHSVRSLAAVY--NKVWCGYKNKIHVVDPK-SLVVLKS-------FDAHPRRESQVRQMTWAGDG--VWVSIRLDST 126 (151)
Q Consensus 59 ~~~~~pV~~m~~v~--~~Lw~g~~n~I~vid~~-t~~i~~~-------~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~ 126 (151)
..+..+|+++.+.. +.|..|.++.|++||.+ +.+..+. +.+|.. .|.++.+++++ .+++++.|+.
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTE---VITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCC---CEEEEEECSSCTTEEEEEETTSC
T ss_pred cCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCc---ceEEEEECCCCCcEEEEEeCCCe
Confidence 34569999999974 56777766799999999 4445553 345654 89999999875 7899999999
Q ss_pred EEEEeCCccce
Q psy16020 127 LRMYNAHTYQH 137 (151)
Q Consensus 127 l~lwd~~t~~~ 137 (151)
|++||.++.+.
T Consensus 251 i~iwd~~~~~~ 261 (447)
T 3dw8_B 251 IRLCDMRASAL 261 (447)
T ss_dssp EEEEETTTCSS
T ss_pred EEEEECcCCcc
Confidence 99999998876
No 99
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.04 E-value=1.9e-08 Score=80.19 Aligned_cols=120 Identities=10% Similarity=0.114 Sum_probs=91.4
Q ss_pred CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020 16 DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~ 89 (151)
..|.++.+. ++.++.|..||+|.+|+....+ . ....+..+..+|+++.+.. ..|..|+. +.|++||..
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-----~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-----R-AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-----C-CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-----c-ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 578888874 4578889999999999875322 1 1223444568999999974 56777775 689999999
Q ss_pred CCcEEEEEEecCCC----CCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 90 SLVVLKSFDAHPRR----ESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 90 t~~i~~~~~~h~~~----~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+++..+.+..+... ...|++++++++| .+++++.|+.|++||..+.+.+..+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 99999998876432 1248999998665 4788999999999999988887766
No 100
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.03 E-value=1.5e-08 Score=85.84 Aligned_cols=133 Identities=16% Similarity=0.212 Sum_probs=97.1
Q ss_pred CceeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCC-----------------CCCCCcceE----------
Q psy16020 6 PTPYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDG-----------------QWDLSKYHT---------- 55 (151)
Q Consensus 6 ~~~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~-----------------~wd~~~~~~---------- 55 (151)
.+.+..++- .+.|.++.+.++ ++..|..||+|.+|+..... .|+.+....
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 344444543 378999999754 68888899999999864210 011111111
Q ss_pred --E----------EeCCCCCceEEEeeeCC---EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EE
Q psy16020 56 --V----------TLGLPHHSVRSLAAVYN---KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VW 118 (151)
Q Consensus 56 --i----------~l~~~~~pV~~m~~v~~---~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vw 118 (151)
+ .+..+..+|+++.+..+ .|..|+. +.|++||.++++..+++.+|++ .|.++.+++++ .+
T Consensus 129 ~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~---~V~~v~fspdg~~l 205 (611)
T 1nr0_A 129 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK---FVHSVRYNPDGSLF 205 (611)
T ss_dssp EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS---CEEEEEECTTSSEE
T ss_pred eEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC---ceEEEEECCCCCEE
Confidence 1 12224578999998752 4777774 6899999999999999999975 89999999776 48
Q ss_pred EEEcCCCeEEEEeCCccceeeeE
Q psy16020 119 VSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 119 is~~~d~~l~lwd~~t~~~l~~i 141 (151)
+|++.|++|++||..+++.+..+
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEEC
T ss_pred EEEECCCcEEEEECCCCcEeeee
Confidence 89999999999999998887766
No 101
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.03 E-value=5.7e-09 Score=84.60 Aligned_cols=113 Identities=12% Similarity=0.043 Sum_probs=84.3
Q ss_pred CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeC-CeEEEEeC
Q psy16020 16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYK-NKIHVVDP 88 (151)
Q Consensus 16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~-n~I~vid~ 88 (151)
+.|+||.+++ +.|.+|..||+|.+|+...+ +....+.+..+..+|+||.+. ++.|..|+. +.|.+||.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-----~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-----DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCC-----SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-----CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 5799999975 35888999999999987522 233455555567999999996 256777774 68999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t 134 (151)
++..... +..+......+.++.+++++ ..++++.|+.|++||.++
T Consensus 195 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 195 KGNILRV-FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp TSCEEEE-EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred cCCceeE-EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence 8765544 44343444568888888664 478999999999999874
No 102
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.03 E-value=7.8e-09 Score=79.79 Aligned_cols=134 Identities=10% Similarity=0.096 Sum_probs=101.8
Q ss_pred CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeee--C----CEE
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAV--Y----NKV 75 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v--~----~~L 75 (151)
..+.+++..++.+..+.++....+.++++..+|.+.+|+..... .....+.. ...+++++.+. . +.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T 3mmy_A 158 TRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP------SEFRRIESPLKHQHRCVAIFKDKQNKPTGF 231 (368)
T ss_dssp SSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC------EEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred CCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc------chhhhccccccCCCceEEEcccCCCCCCeE
Confidence 45677888999999999999999999999999999999875321 11112221 23666777664 2 227
Q ss_pred EEEeC-CeEEEEeCCCC---cEEEEEEecCCCC---------CceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 76 WCGYK-NKIHVVDPKSL---VVLKSFDAHPRRE---------SQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~---~i~~~~~~h~~~~---------~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.+|+. +.|++||.++. +....+.+|.... ..|+++.+++++ .+++++.|+.|++||.+++++++.+
T Consensus 232 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 232 ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred EEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 77775 68999999987 6778888885311 159999999765 5889999999999999999998887
Q ss_pred e
Q psy16020 142 D 142 (151)
Q Consensus 142 d 142 (151)
.
T Consensus 312 ~ 312 (368)
T 3mmy_A 312 E 312 (368)
T ss_dssp C
T ss_pred c
Confidence 5
No 103
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.02 E-value=2.7e-08 Score=85.47 Aligned_cols=131 Identities=14% Similarity=0.161 Sum_probs=102.3
Q ss_pred CCCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020 3 YPHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~ 77 (151)
+.+.+++..++.+ .+|.++.+.+ +.+.+|..||.|.+|+...+ +. ...+..+..+|+++.+.. ..|..
T Consensus 42 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~-----~~--~~~~~~~~~~v~~~~~s~~~~~l~~ 114 (814)
T 3mkq_A 42 YETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG-----EK--VVDFEAHPDYIRSIAVHPTKPYVLS 114 (814)
T ss_dssp TTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC-----CE--EEEEECCSSCEEEEEECSSSSEEEE
T ss_pred CCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-----cE--EEEEecCCCCEEEEEEeCCCCEEEE
Confidence 3456777888754 7999999975 46999999999999987532 12 223333458999999974 46888
Q ss_pred EeC-CeEEEEeCCCC-cEEEEEEecCCCCCceeEEEEeC-CE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 78 GYK-NKIHVVDPKSL-VVLKSFDAHPRRESQVRQMTWAG-DG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 78 g~~-n~I~vid~~t~-~i~~~~~~h~~~~~~I~~m~~~~-~~-vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
|+. +.|.+||.++. ...+.+.+|.. .|.++.+++ ++ .+++++.|+.|++||..+.+....+..
T Consensus 115 ~~~dg~i~vw~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 115 GSDDLTVKLWNWENNWALEQTFEGHEH---FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp EETTSEEEEEEGGGTSEEEEEEECCSS---CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EcCCCEEEEEECCCCceEEEEEcCCCC---cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence 875 68999999987 78888998864 899999997 44 688999999999999988777766643
No 104
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.02 E-value=4.7e-09 Score=82.95 Aligned_cols=121 Identities=12% Similarity=0.190 Sum_probs=92.7
Q ss_pred CCCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC----CCCceEEEeeeC---CEEEEEeCC--
Q psy16020 14 ILDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL----PHHSVRSLAAVY---NKVWCGYKN-- 81 (151)
Q Consensus 14 l~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~----~~~pV~~m~~v~---~~Lw~g~~n-- 81 (151)
..+.|.++.+.++ .+++|..||.|.+|+.... +....+.... +..+|+++.+.. ..+.+|+.+
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK-----KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT-----EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC-----CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 3478999999754 6888899999999987531 1112222221 048999999974 357777754
Q ss_pred --eEEEEeCCCC-cEEEEEE-ecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 82 --KIHVVDPKSL-VVLKSFD-AHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 82 --~I~vid~~t~-~i~~~~~-~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.|++||.+++ +..+.+. +|.. .|.++.+++ ...+++++.|+.|++||.++.+++..+.
T Consensus 239 ~~~i~~~d~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 239 DPSILIWDLRNANTPLQTLNQGHQK---GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp SCCCCEEETTSTTSCSBCCCSCCSS---CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred CceEEEEeCCCCCCCcEEeecCccC---ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 8999999987 6777787 8864 899999985 4458899999999999999999988875
No 105
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.01 E-value=2.8e-08 Score=76.63 Aligned_cols=129 Identities=7% Similarity=0.091 Sum_probs=94.3
Q ss_pred eCCCceeeeEEeC-----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--------CCEEEEEe
Q psy16020 13 KILDTALPPVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--------YNKVWCGY 79 (151)
Q Consensus 13 ~l~~~V~~i~~~~-----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--------~~~Lw~g~ 79 (151)
.-+++|.++.+.+ +.+++|..||.|.+|+..... .... .+..+..+|+++... ++.|..|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~--~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~ 136 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE----MPVY--SVKGHKEIINAIDGIGGLGIGEGAPEIVTGS 136 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS----SCSE--EECCCSSCEEEEEEESGGGCC-CCCEEEEEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC----ccEE--EEEecccceEEEeeccccccCCCccEEEEEe
Confidence 4457999999975 568999999999999876322 0222 333445999999653 35788877
Q ss_pred C-CeEEEEeCCCCc-EEEEEEecCCC-CCceeEEEE----e-CCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 80 K-NKIHVVDPKSLV-VLKSFDAHPRR-ESQVRQMTW----A-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 80 ~-n~I~vid~~t~~-i~~~~~~h~~~-~~~I~~m~~----~-~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
. +.|++||.++++ ..+.+..|... ...|.++.+ + ....+++++.|+.|++||.++.+..........+
T Consensus 137 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v 212 (357)
T 3i2n_A 137 RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGV 212 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCE
T ss_pred CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCce
Confidence 5 689999999987 78888876542 347888883 3 3345788999999999999998887666544443
No 106
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.01 E-value=2.5e-09 Score=83.97 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=85.7
Q ss_pred ceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020 7 TPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK- 80 (151)
Q Consensus 7 ~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~- 80 (151)
+++..++-+ ++|.++.+.+ +++++|..||+|.+|+...+..| .....+..+..+|+++.+.. +.|.+|+.
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW----KQTLVLLRLNRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC----CCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce----eeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence 455566543 7999999975 47889999999999987643312 12344545569999999974 56777775
Q ss_pred CeEEEEeCCCCc---EEEEEEe-cCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCC
Q psy16020 81 NKIHVVDPKSLV---VLKSFDA-HPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 81 n~I~vid~~t~~---i~~~~~~-h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~ 133 (151)
+.|++||.++.+ +.+.+.. |.. .|.++.+++++ .+++++.|+.|++||.+
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 122 RVISVCYFEQENDWWVSKHLKRPLRS---TILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SCEEECCC-----CCCCEEECSSCCS---CEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred CeEEEEEECCcccceeeeEeecccCC---CeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 689999999887 5788887 764 89999999765 58899999999999985
No 107
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.99 E-value=2.4e-08 Score=78.62 Aligned_cols=114 Identities=17% Similarity=0.226 Sum_probs=87.7
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (151)
Q Consensus 15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~ 89 (151)
.++|.++.+.+ +++++|..||++.+|+...+. ......+..+..+|+++.+.. +.|..|+. +.|++||.+
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-----FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-----eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 36899999875 478999999999999875321 112335555669999999973 56777774 689999988
Q ss_pred CC---cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020 90 SL---VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 90 t~---~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~ 136 (151)
+. +....+.+|.. .|.++.+++++ .+++++.|+.|++||.++.+
T Consensus 136 ~~~~~~~~~~~~~h~~---~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 136 EEDEYECVSVLNSHTQ---DVKHVVWHPSQELLASASYDDTVKLYREEEDD 183 (345)
T ss_dssp TTSCEEEEEEECCCCS---CEEEEEECSSSSCEEEEETTSCEEEEEEETTE
T ss_pred CCCCeEEEEEecCcCC---CeEEEEECCCCCEEEEEeCCCcEEEEEecCCC
Confidence 75 45667778865 89999999765 48899999999999998764
No 108
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.98 E-value=9.1e-08 Score=72.71 Aligned_cols=109 Identities=15% Similarity=0.192 Sum_probs=85.0
Q ss_pred eeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEE
Q psy16020 19 LPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLK 95 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~ 95 (151)
.+|.+..+.+++...||+|.+|+...+ +..+.+++..+..+|+|+.+.. +.|..|+. +.|++||.++++..+
T Consensus 29 ~~l~WS~~~~lAvg~D~tV~iWd~~tg-----~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 29 NLVDWSSGNVLAVALDNSVYLWSASSG-----DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp BCEEECTTSEEEEEETTEEEEEETTTC-----CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred eEEEECCCCEEEEEeCCEEEEEECCCC-----CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 446676666666666999999986521 2334566666668999999974 56888875 689999999999999
Q ss_pred EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccc
Q psy16020 96 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~ 136 (151)
++.+|+. .+.++...+.. .++++.++.+++|+..+..
T Consensus 104 ~~~~h~~---~~~~~~~~~~~-l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 104 NMTSHSA---RVGSLSWNSYI-LSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp EEECCSS---CEEEEEEETTE-EEEEETTSEEEEEETTSSS
T ss_pred EecCccc---eEEEeecCCCE-EEEEecCCceEeeecCCCc
Confidence 9999975 78888877664 7799999999999998743
No 109
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.98 E-value=3.2e-09 Score=83.38 Aligned_cols=122 Identities=11% Similarity=0.062 Sum_probs=88.3
Q ss_pred CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020 14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (151)
Q Consensus 14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~ 88 (151)
..+.|.++.+.+ +.+++|..||+|.+|+...+..|.. ...+.- .+..+|+++.+.. +.|.+|+. +.|++||.
T Consensus 99 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 99 LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV--SKHLKR-PLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC--CEEECS-SCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred cCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee--eeEeec-ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 447999999874 4799999999999998765443322 222222 1459999999974 46887775 68999998
Q ss_pred C------------------CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccce----eeeEe
Q psy16020 89 K------------------SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQH----LQDVD 142 (151)
Q Consensus 89 ~------------------t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~----l~~id 142 (151)
+ +++..+++ .|.. .|.++.+++++- +++++.|+.|++||.++.+. ++.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 248 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG---WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK 248 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS---SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCc---eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec
Confidence 5 45566677 6754 899999997764 88999999999999999877 55553
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.97 E-value=1.1e-08 Score=89.04 Aligned_cols=115 Identities=12% Similarity=0.054 Sum_probs=89.4
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEeC-CeEEEEe
Q psy16020 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYK-NKIHVVD 87 (151)
Q Consensus 15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~~-n~I~vid 87 (151)
.++|.++.+.+ +.+++|..||+|.+|+... +. ......+..+..+|++|.+. ++.|..|+. +.|++||
T Consensus 9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~-~~----~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEG-ET----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETTTEEEEEEEET-TE----EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred cceeEEEEECCCCCeEEEEECCCcEEEEecCC-CC----CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 37899998864 4699999999999998742 11 11223455556999999996 456877774 6899999
Q ss_pred CCCCc--EEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccce
Q psy16020 88 PKSLV--VLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 88 ~~t~~--i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~ 137 (151)
.++++ ....+.+|.. .|+++.++++ ..+++++.|+.|++||.++.+.
T Consensus 84 ~~~~~~~~~~~~~~h~~---~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~ 135 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSA---SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 135 (753)
T ss_dssp EETTEEEEEEEECCCSS---CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC
T ss_pred CCCCcccccccccCCCC---CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC
Confidence 99987 6677777864 8999999975 4689999999999999987643
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.97 E-value=2.1e-08 Score=80.03 Aligned_cols=130 Identities=14% Similarity=0.142 Sum_probs=96.6
Q ss_pred ceeeeeeCCCceeeeEEeC-CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEE---eCCCCCceEEEeee-CCEEEEEe-
Q psy16020 7 TPYPLNKILDTALPPVHVQ-GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVT---LGLPHHSVRSLAAV-YNKVWCGY- 79 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~-~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~---l~~~~~pV~~m~~v-~~~Lw~g~- 79 (151)
+.+..++.+..+.++.+.+ ++++++. .+|+|.+|+...+. ....+. +..+..+|.++.+. ++++|+++
T Consensus 114 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 188 (433)
T 3bws_A 114 RFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQ-----TVRLSPPEKYKKKLGFVETISIPEHNELWVSQM 188 (433)
T ss_dssp EEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCC-----EEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG
T ss_pred eEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCe-----EeeecCcccccccCCceeEEEEcCCCEEEEEEC
Confidence 6677778888888998874 4566555 46789999875321 111111 11334789999985 47777666
Q ss_pred -CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 80 -KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 80 -~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
++.|++||+++++...++..|.. .+.++.+++++ ++++...|+.|++||.++.+.+..+...
T Consensus 189 ~d~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKATVDLTGK---WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp GGTEEEEEETTTCCEEEEEECSSS---SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC
T ss_pred CCCEEEEEECCCceEEEEEcCCCC---CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC
Confidence 37999999999999999998764 89999999654 6778889999999999999888877543
No 112
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.97 E-value=3.4e-09 Score=82.56 Aligned_cols=120 Identities=15% Similarity=0.232 Sum_probs=86.8
Q ss_pred eeeeee-CCCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----------
Q psy16020 8 PYPLNK-ILDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---------- 72 (151)
Q Consensus 8 ~l~~i~-l~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---------- 72 (151)
++..++ ..++|.++.+.++ .+.+|..||+|.+|+....+.|+... .+..+..+|+++.+..
T Consensus 95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~~ 170 (316)
T 3bg1_A 95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK----INNAHTIGCNAVSWAPAVVPGSLIDH 170 (316)
T ss_dssp EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC----BTTSSSSCBCCCEECCCCCC------
T ss_pred EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee----eeccccCCcceEEEccccCCcccccc
Confidence 344443 3368999999763 68889999999999987544442110 1222346777776643
Q ss_pred ---------CEEEEEe-CCeEEEEeCCCC---cEEEEEEecCCCCCceeEEEEeCC-----EEEEEEcCCCeEEEEeCCc
Q psy16020 73 ---------NKVWCGY-KNKIHVVDPKSL---VVLKSFDAHPRRESQVRQMTWAGD-----GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 73 ---------~~Lw~g~-~n~I~vid~~t~---~i~~~~~~h~~~~~~I~~m~~~~~-----~vwis~~~d~~l~lwd~~t 134 (151)
..|..|+ ++.|++||.++. +..+++.+|++ .|.++.++++ ..++|++.|++|++||.++
T Consensus 171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~---~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD---WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS---CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC---ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 2466666 468999998754 56778889975 8999999876 4689999999999999876
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.96 E-value=7.6e-08 Score=78.13 Aligned_cols=124 Identities=14% Similarity=-0.004 Sum_probs=90.9
Q ss_pred CCceeeeEEeCC-----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC-CeEEEEe
Q psy16020 15 LDTALPPVHVQG-----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-NKIHVVD 87 (151)
Q Consensus 15 ~~~V~~i~~~~~-----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~-n~I~vid 87 (151)
.+.|.++.+.++ .+++|..||+|.+|+.... .....+ +..+..+|+++.+. ++.|+.|+. +.|++||
T Consensus 195 ~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~-----~~~~~~-~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd 268 (450)
T 2vdu_B 195 VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC-----FIVDKW-LFGHKHFVSSICCGKDYLLLSAGGDDKIFAWD 268 (450)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-----TCEEEE-CCCCSSCEEEEEECSTTEEEEEESSSEEEEEE
T ss_pred cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-----ceeeee-ecCCCCceEEEEECCCCEEEEEeCCCeEEEEE
Confidence 378999998875 7999999999999987532 111121 32345899999997 456877774 6999999
Q ss_pred CCCCcEEEEEEecC----------------------CCCCceeEEEEeCC--EEEEEEcCCCeEEEEeC--Ccc---cee
Q psy16020 88 PKSLVVLKSFDAHP----------------------RRESQVRQMTWAGD--GVWVSIRLDSTLRMYNA--HTY---QHL 138 (151)
Q Consensus 88 ~~t~~i~~~~~~h~----------------------~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~--~t~---~~l 138 (151)
..+++..+++..+. .....|..+.+.++ .+.++.+.++.|++||. .+. +.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~ 348 (450)
T 2vdu_B 269 WKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALK 348 (450)
T ss_dssp TTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEE
T ss_pred CCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeec
Confidence 99999999998552 22346888888854 44444448999999999 554 777
Q ss_pred eeEeCC
Q psy16020 139 QDVDIE 144 (151)
Q Consensus 139 ~~idi~ 144 (151)
+.+...
T Consensus 349 ~~~~~~ 354 (450)
T 2vdu_B 349 QIITFP 354 (450)
T ss_dssp EEEECS
T ss_pred cEeccC
Confidence 777544
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.96 E-value=2.6e-08 Score=80.72 Aligned_cols=128 Identities=12% Similarity=0.073 Sum_probs=93.2
Q ss_pred eeeeeCCCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCC-----CCCCcceEEEeCCCCCceEEEeeeC--C-EEEE
Q psy16020 9 YPLNKILDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQ-----WDLSKYHTVTLGLPHHSVRSLAAVY--N-KVWC 77 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~-----wd~~~~~~i~l~~~~~pV~~m~~v~--~-~Lw~ 77 (151)
...+..++.|.+|.+.+. .+++|..+|.|.+|+...... -.......+. .+..+|.++.... . .|.+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeCCCCCCeEEE
Confidence 455667789999999874 577888899999999864110 0012223333 3458999999974 3 6777
Q ss_pred Ee-CCeEEEEeCCCCc----E---EEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCcc---ceeeeE
Q psy16020 78 GY-KNKIHVVDPKSLV----V---LKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTY---QHLQDV 141 (151)
Q Consensus 78 g~-~n~I~vid~~t~~----i---~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~---~~l~~i 141 (151)
|+ ++.|++||..+.. . .+.+.+|.. .|+++.+++ ..++++++.|+.|++||.++. +.+..+
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~---~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTA---VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSS---CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCC---CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 77 4689999998732 2 456777764 899999985 567889999999999999986 455554
No 115
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.95 E-value=1.9e-07 Score=73.47 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=95.9
Q ss_pred CCCceeeeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEe--CCeEEEEeCC
Q psy16020 14 ILDTALPPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGY--KNKIHVVDPK 89 (151)
Q Consensus 14 l~~~V~~i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~--~n~I~vid~~ 89 (151)
|.+.+.+|...++++|++.. +|.|.+++... .+....++.+ ...+.|++ .+++||++. ++.|++||++
T Consensus 42 lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t-----~~~~~~i~~~---~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~ 113 (328)
T 3dsm_A 42 LGDVAQSMVIRDGIGWIVVNNSHVIFAIDINT-----FKEVGRITGF---TSPRYIHFLSDEKAYVTQIWDYRIFIINPK 113 (328)
T ss_dssp CBSCEEEEEEETTEEEEEEGGGTEEEEEETTT-----CCEEEEEECC---SSEEEEEEEETTEEEEEEBSCSEEEEEETT
T ss_pred cCccceEEEEECCEEEEEEcCCCEEEEEECcc-----cEEEEEcCCC---CCCcEEEEeCCCeEEEEECCCCeEEEEECC
Confidence 44667888888999999987 48899998752 2233445433 45578888 678999998 5799999999
Q ss_pred CCcEEEEEEecCC--CCCceeEEEEeCCEEEEEEc-CCCeEEEEeCCccceeeeEeCCcc
Q psy16020 90 SLVVLKSFDAHPR--RESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 90 t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwis~~-~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
|+++.+++..... .......|+..+..+|++.. .++.|.+||..+.+.++.|.....
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~ 173 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ 173 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC
T ss_pred CCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC
Confidence 9999999986541 01145567778889999987 599999999999999999976543
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.95 E-value=1.7e-08 Score=80.06 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=76.0
Q ss_pred eeeeEEeCCeE-EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCe--------------
Q psy16020 18 ALPPVHVQGRV-VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNK-------------- 82 (151)
Q Consensus 18 V~~i~~~~~~v-~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~-------------- 82 (151)
+.++.+..+.+ ++|..+|+|.+|+...+ +....+. ...+|+++.+..+.+.++.+++
T Consensus 63 ~~~~~~~~~~~~~~~~~d~~v~iWd~~~~-----~~~~~~~---~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 134 (355)
T 3vu4_A 63 KVRMLHRTNYVAFVTGVKEVVHIWDDVKK-----QDVSRIK---VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRIT 134 (355)
T ss_dssp EEEECTTSSEEEEECSSTTEEEEEETTTT-----EEEEEEE---CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSS
T ss_pred EEEEcCCCCEEEEEECCccEEEEEECCCC-----cEEEEEE---CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeE
Confidence 33444445555 66788899999986521 1112222 1257777777665555544444
Q ss_pred --------------------------EEEEeCCCCc----------------EEEEEEecCCCCCceeEEEEeCCEE-EE
Q psy16020 83 --------------------------IHVVDPKSLV----------------VLKSFDAHPRRESQVRQMTWAGDGV-WV 119 (151)
Q Consensus 83 --------------------------I~vid~~t~~----------------i~~~~~~h~~~~~~I~~m~~~~~~v-wi 119 (151)
|++||.++++ ..+.+.+|.. .|+++.+++++- ++
T Consensus 135 ~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~---~v~~~~~s~~g~~l~ 211 (355)
T 3vu4_A 135 DDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN---PIKMVRLNRKSDMVA 211 (355)
T ss_dssp CCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSS---CEEEEEECTTSSEEE
T ss_pred EeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC---ceEEEEECCCCCEEE
Confidence 5555544433 1566788864 899999997764 88
Q ss_pred EEcCCCe-EEEEeCCccceeeeEe
Q psy16020 120 SIRLDST-LRMYNAHTYQHLQDVD 142 (151)
Q Consensus 120 s~~~d~~-l~lwd~~t~~~l~~id 142 (151)
|++.|++ |++||.++++++..+.
T Consensus 212 s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 212 TCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp EEETTCSEEEEEETTTCCEEEEEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEE
Confidence 9999998 9999999999999886
No 117
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.93 E-value=8.5e-09 Score=83.58 Aligned_cols=117 Identities=9% Similarity=0.049 Sum_probs=86.3
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeC--CEEEEEeC-CeEEEEe
Q psy16020 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVY--NKVWCGYK-NKIHVVD 87 (151)
Q Consensus 15 ~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid 87 (151)
.++|.+|.+.+ +.++.|..||+|.+|+... .....+.-. ....++.++.+.. ..|.+|+. +.|++||
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd 237 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG------NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLN 237 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEECSSSCEEEEETTS------CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC------CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeec
Confidence 37999999863 4799999999999998642 122222222 2235678888864 56888875 6899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.++ +...++.+|.. .|+++.++++ .+.++++.|+.|++||.++.+....+
T Consensus 238 ~~~-~~~~~~~~h~~---~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~ 289 (435)
T 4e54_B 238 MDG-KELWNLRMHKK---KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF 289 (435)
T ss_dssp SSS-CBCCCSBCCSS---CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC
T ss_pred cCc-ceeEEEecccc---eEEeeeecCCCceEEEEecCcceeeEEecccccccceE
Confidence 875 44567888875 8999999854 47889999999999999886654443
No 118
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.93 E-value=7.4e-08 Score=75.82 Aligned_cols=132 Identities=10% Similarity=0.014 Sum_probs=99.7
Q ss_pred CCCCceeeeeeCCCceeeeEE-eCCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCC---CceEEEeeeCCEEEE
Q psy16020 3 YPHPTPYPLNKILDTALPPVH-VQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPH---HSVRSLAAVYNKVWC 77 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~-~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~---~pV~~m~~v~~~Lw~ 77 (151)
..+.+.++++.....+..|.. .++++|++. .+|.|.+|+... .+....++++... .....|++.+++||+
T Consensus 71 ~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-----~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv 145 (328)
T 3dsm_A 71 INTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-----YEITGYIECPDMDMESGSTEQMVQYGKYVYV 145 (328)
T ss_dssp TTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT-----TEEEEEEECTTCCTTTCBCCCEEEETTEEEE
T ss_pred CcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC-----CeEEEEEEcCCccccCCCcceEEEECCEEEE
Confidence 345677788876677888888 778999998 789999998752 1233456665410 134567778899999
Q ss_pred Ee---CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCC----------CeEEEEeCCccceeeeEeC
Q psy16020 78 GY---KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLD----------STLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 78 g~---~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d----------~~l~lwd~~t~~~l~~idi 143 (151)
+. ++.|.+||++|+++++++.... ....+..+++ .+|++...+ +.|.++|..+++..+.+++
T Consensus 146 ~~~~~~~~v~viD~~t~~~~~~i~~g~----~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 146 NCWSYQNRILKIDTETDKVVDELTIGI----QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp EECTTCCEEEEEETTTTEEEEEEECSS----CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred EcCCCCCEEEEEECCCCeEEEEEEcCC----CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 96 4689999999999999998643 4567777764 468887765 8999999999999988876
No 119
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.93 E-value=8.1e-08 Score=77.31 Aligned_cols=106 Identities=15% Similarity=0.226 Sum_probs=83.1
Q ss_pred eEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEE
Q psy16020 21 PVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKS 96 (151)
Q Consensus 21 i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~ 96 (151)
|-+.. |.|-||+ |++|.+|+...+ +..+.+++..+..+|+|+.+.. +.|.+|+. +.|.+||.++++..++
T Consensus 111 l~wS~~n~lAvgl-d~tV~lWd~~tg-----~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 111 VDWSSGNVLAVAL-DNSVYLWSASSG-----DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp EEECTTSEEEEEE-TTEEEEEETTTC-----CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEECCCCEEEEEe-CCEEEEEECCCC-----CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 44443 4566666 999999987532 2334566666668999999974 56888885 6899999999999999
Q ss_pred EEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccc
Q psy16020 97 FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 97 ~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~ 136 (151)
+.+|+. .+.++...+. +.++++.|+.+++||..+..
T Consensus 185 ~~~h~~---~v~~~s~~~~-~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 185 MTSHSA---RVGSLSWNSY-ILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp ECCCSS---CEEEEEEETT-EEEEEETTSEEEEEETTSSS
T ss_pred EeCCCC---ceEEEeeCCC-EEEEEeCCCceeEeeecccc
Confidence 999975 8999988765 47799999999999988633
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.92 E-value=2.6e-07 Score=73.61 Aligned_cols=131 Identities=8% Similarity=0.060 Sum_probs=96.8
Q ss_pred CCCceeeeeeCC-CceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEE
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWC 77 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~ 77 (151)
.+.++++.++.+ ..+.++.+.+ +.+|++. .+|.|.+|+... .+.+..-.....+.++.+. ++.||+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~--------~~~~~~~~~~~~~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT--------KLEIRKTDKIGLPRGLLLSKDGKELYI 270 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT--------TEEEEECCCCSEEEEEEECTTSSEEEE
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC--------CcEEEEecCCCCceEEEEcCCCCEEEE
Confidence 455677777754 6899998875 3587666 689999998742 1222222223668888886 357998
Q ss_pred Ee---------CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 78 GY---------KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 78 g~---------~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
++ ++.|++||+.+++....+. |.. .+..+.++++ .++++...++.|++||..+.+.++.+.....
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~---~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~ 346 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPG---NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDK 346 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEE---CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred EECCCCccccCCCeEEEEECCCCcEEeecc-CCC---CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCC
Confidence 87 3589999999999888775 432 7888888865 4789999999999999999998888865433
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.92 E-value=3.6e-08 Score=85.88 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=92.6
Q ss_pred eeeeee-CCCceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----------
Q psy16020 8 PYPLNK-ILDTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---------- 72 (151)
Q Consensus 8 ~l~~i~-l~~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---------- 72 (151)
++..+. ..++|.++.+.+ +.+++|..||+|.+|+...... .....+..+..+|+++.+..
T Consensus 91 ~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-----~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 91 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-----CCCEEEECCSSCEEEEEECCCC--------
T ss_pred ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-----cceeEeecCCCceEEEEecCcccccccccc
Confidence 444444 337999999974 4799999999999999864321 12223333458999999864
Q ss_pred -----CEEEEEeC-CeEEEEeCCCC----cEEEEEEecCCCCCceeEEEEeCC----EEEEEEcCCCeEEEEeCCccc
Q psy16020 73 -----NKVWCGYK-NKIHVVDPKSL----VVLKSFDAHPRRESQVRQMTWAGD----GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 73 -----~~Lw~g~~-n~I~vid~~t~----~i~~~~~~h~~~~~~I~~m~~~~~----~vwis~~~d~~l~lwd~~t~~ 136 (151)
+.+.+|+. +.|++||..++ ++..++.+|.. .|+++.++++ ...++++.|+.|++||.++.+
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~---~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD---WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS---CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC---cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 45777774 68999998876 67778888875 8999999976 568999999999999999864
No 122
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.91 E-value=3.1e-08 Score=88.33 Aligned_cols=126 Identities=15% Similarity=0.028 Sum_probs=94.5
Q ss_pred CceeeeeeCCCceeeeEEeCCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-C
Q psy16020 6 PTPYPLNKILDTALPPVHVQGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-N 81 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n 81 (151)
.+++....-.++|.+|.+.+++ ++.|..||+|.+|+...+ +....+. +..+|+++.+. ++.|.+|+. +
T Consensus 49 ~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~-----~~~~~~~---~~~~V~~v~~sp~g~~l~sgs~dg 120 (902)
T 2oaj_A 49 VEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQ-----KVLTTVF---VPGKITSIDTDASLDWMLIGLQNG 120 (902)
T ss_dssp CEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTC-----SEEEEEE---CSSCEEEEECCTTCSEEEEEETTS
T ss_pred cEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCC-----cEEEEEc---CCCCEEEEEECCCCCEEEEEcCCC
Confidence 3444444445799999998776 888999999999987532 1222232 23789999997 367888885 6
Q ss_pred eEEEEeCCCCcEE-----------EEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 82 KIHVVDPKSLVVL-----------KSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 82 ~I~vid~~t~~i~-----------~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
.|++||.++++.. ..+.+|. ..|.+++++++ +..++++.|+.+ +||.++.++++.+..
T Consensus 121 ~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~---~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~ 191 (902)
T 2oaj_A 121 SMIVYDIDRDQLSSFKLDNLQKSSFFPAARL---SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIY 191 (902)
T ss_dssp CEEEEETTTTEEEEEEECCHHHHHTCSSSCC---CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECC
T ss_pred cEEEEECCCCccccceeccccccccccccCC---CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEec
Confidence 8999999998864 1123454 48999999985 568899999999 999999988877753
No 123
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.91 E-value=2.5e-08 Score=84.22 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=88.3
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcc-eEEEeCCCCCceEEEe--eeC-C-E-EEEEe-CCeEEEEe
Q psy16020 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKY-HTVTLGLPHHSVRSLA--AVY-N-K-VWCGY-KNKIHVVD 87 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~-~~i~l~~~~~pV~~m~--~v~-~-~-Lw~g~-~n~I~vid 87 (151)
.+|.++.+. ++.+.+|..||+|.+|+.... ..+ ..+.. +..+|+++. +.. + + |..|+ +++|++||
T Consensus 267 ~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~-----~~~~~~~~~--H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 267 SLITTFDFLSPTTVVCGFKNGFVAEFDLTDP-----EVPSFYDQV--HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp TCEEEEEESSSSEEEEEETTSEEEEEETTBC-----SSCSEEEEC--SSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred CCEEEEEecCCCeEEEEeCCCEEEEEECCCC-----CCceEEeec--ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 689999885 468999999999999998532 122 22333 349999994 343 3 4 56565 46899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
.++++..+++.+|.. ...|.++++++++ .+++++.|.+|++||.++++++..+
T Consensus 340 ~~~~~~~~~~~~~~~-~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l 393 (524)
T 2j04_B 340 PKDIATTKTTVSRFR-GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL 393 (524)
T ss_dssp GGGHHHHCEEEEECS-CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEE
T ss_pred CCCCCcccccccccc-cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceee
Confidence 999998888888863 2347889999754 5889999999999999987765443
No 124
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.90 E-value=3.2e-07 Score=70.86 Aligned_cols=130 Identities=11% Similarity=0.017 Sum_probs=100.9
Q ss_pred CCCCceeeeeeCCCc--eeeeEEeCCeEEEEecC---CcEEEEEcCCCCCCCCCcceEEEeCCCCCce-EEEeeeCCEEE
Q psy16020 3 YPHPTPYPLNKILDT--ALPPVHVQGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVW 76 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~--V~~i~~~~~~v~vgl~n---G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV-~~m~~v~~~Lw 76 (151)
.-.++.+.++..+.. ..-|.|.++++|++.+. ..|.+++...+ +....+++.. .+- -.+++.+++||
T Consensus 6 ~~~~~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tg-----kv~~~~~l~~--~~fgeGi~~~~~~ly 78 (243)
T 3mbr_X 6 TQGYRVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETG-----RILQRAEVPP--PYFGAGIVAWRDRLI 78 (243)
T ss_dssp BCCEEEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTC-----CEEEEEECCT--TCCEEEEEEETTEEE
T ss_pred ccceEEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCC-----CEEEEEeCCC--CcceeEEEEeCCEEE
Confidence 345678888877744 55899999999999877 38999988632 3445566654 332 35677899999
Q ss_pred EEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 77 CGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 77 ~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
... .+.++|+|++|++.+++|..... . -.+...+..+|+|- .++.|.++|+.|++.+..|.+.
T Consensus 79 ~ltw~~~~v~v~D~~tl~~~~ti~~~~~---G-wglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 79 QLTWRNHEGFVYDLATLTPRARFRYPGE---G-WALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp EEESSSSEEEEEETTTTEEEEEEECSSC---C-CEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred EEEeeCCEEEEEECCcCcEEEEEeCCCC---c-eEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEc
Confidence 999 47999999999999999996532 2 34556777888886 5999999999999999999875
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.89 E-value=2.6e-07 Score=78.10 Aligned_cols=137 Identities=10% Similarity=0.093 Sum_probs=102.3
Q ss_pred CCCCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-----C-CE
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-----Y-NK 74 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-----~-~~ 74 (151)
..+.++++.++....+.++.+.+ +++|++..+|+|.+|+.... +.+....++.+. ..+.+++. + +.
T Consensus 166 ~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~---t~~~~~~i~~g~---~p~~va~sp~~~~dg~~ 239 (543)
T 1nir_A 166 GDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAK---EPTKVAEIKIGI---EARSVESSKFKGYEDRY 239 (543)
T ss_dssp TTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSS---SCEEEEEEECCS---EEEEEEECCSTTCTTTE
T ss_pred CCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCC---CCcEEEEEecCC---CcceEEeCCCcCCCCCE
Confidence 45678899998876788887764 47999999999999997210 123334566553 45888886 3 56
Q ss_pred EEEEe--CCeEEEEeCCCCcEEEEEEecCC--------CCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceee--e
Q psy16020 75 VWCGY--KNKIHVVDPKSLVVLKSFDAHPR--------RESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQ--D 140 (151)
Q Consensus 75 Lw~g~--~n~I~vid~~t~~i~~~~~~h~~--------~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~--~ 140 (151)
||+++ .+.|.|||..|+++.+++..+.. .+..+..+..++ ..++++.+.++.|.+||..+.+.++ .
T Consensus 240 l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~ 319 (543)
T 1nir_A 240 TIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS 319 (543)
T ss_dssp EEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEE
T ss_pred EEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEE
Confidence 99998 47999999999999999986421 123688888884 4568899999999999999876655 5
Q ss_pred EeCCc
Q psy16020 141 VDIEP 145 (151)
Q Consensus 141 idi~~ 145 (151)
|+...
T Consensus 320 i~~~~ 324 (543)
T 1nir_A 320 IGAAP 324 (543)
T ss_dssp EECCS
T ss_pred eccCc
Confidence 55433
No 126
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.87 E-value=2.9e-08 Score=79.28 Aligned_cols=123 Identities=12% Similarity=0.179 Sum_probs=88.6
Q ss_pred CCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCC------------ceEEEeeeC--CEEE
Q psy16020 14 ILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH------------SVRSLAAVY--NKVW 76 (151)
Q Consensus 14 l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~------------pV~~m~~v~--~~Lw 76 (151)
..+.|.++.+.+ +.+++|..||+|.+|+........ .....+. .+.. +|+++.+.. ..|.
T Consensus 225 ~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 301 (447)
T 3dw8_B 225 LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD-RHSKLFE--EPEDPSNRSFFSEIISSISDVKFSHSGRYMM 301 (447)
T ss_dssp CCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC-TTCEEEC--CC-----CCHHHHHTTCEEEEEECTTSSEEE
T ss_pred cCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc-ceeeEec--cCCCccccccccccCceEEEEEECCCCCEEE
Confidence 346899999986 469999999999999976432110 1112222 2223 899999974 4677
Q ss_pred EEeCCeEEEEeCCC-CcEEEEEEecCCCCC------------ceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceee
Q psy16020 77 CGYKNKIHVVDPKS-LVVLKSFDAHPRRES------------QVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 77 ~g~~n~I~vid~~t-~~i~~~~~~h~~~~~------------~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
+|+.+.|++||.++ ++..+++.+|..... .+..+.+++++ .+++++.|+.|++||..+.+.+.
T Consensus 302 ~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 302 TRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp EEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred EeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 77788999999997 899999999853111 13347787664 37899999999999999987763
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.87 E-value=6.1e-08 Score=77.81 Aligned_cols=109 Identities=6% Similarity=0.026 Sum_probs=77.3
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee---------CCE-EEEEe-CCeEEEEeCCCCcEE
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV---------YNK-VWCGY-KNKIHVVDPKSLVVL 94 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v---------~~~-Lw~g~-~n~I~vid~~t~~i~ 94 (151)
.+..|..||+|.+|+...+. ......+ .+..+..+|+++.+. +++ |..|+ +++|++||.++.+..
T Consensus 103 ~las~~~d~~v~lw~~~~~~---~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNET---IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEETTSCEEEEEEETTE---EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred EEEEEeCCCcEEEEECCCCc---cceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 47778889999999875321 0011111 133456999999996 344 55444 468999999988877
Q ss_pred EEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 95 KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 95 ~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
..+..|.. .|.++.+.+++ .+++++.|++|++||.++.+...+.
T Consensus 180 ~~~~~~~~---~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 180 LAGYPLSS---PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp EEEEECSS---CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred eeecCCCC---CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccc
Confidence 77777864 89999999765 5899999999999999988766554
No 128
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.85 E-value=4e-07 Score=71.16 Aligned_cols=135 Identities=13% Similarity=0.147 Sum_probs=104.7
Q ss_pred CCCCceeeeeeCCCcee--eeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020 3 YPHPTPYPLNKILDTAL--PPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~--~i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~ 79 (151)
..+.+.+.++.+++..+ -+...++++|++.- +|.+.+|+.. +++....++.+ ...+.. +..-+++||++.
T Consensus 51 ~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~-----t~~v~~~i~~g-~~~g~g-lt~Dg~~l~vs~ 123 (266)
T 2iwa_A 51 LQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRR-----TLSNIKNFTHQ-MKDGWG-LATDGKILYGSD 123 (266)
T ss_dssp TTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETT-----TTEEEEEEECC-SSSCCE-EEECSSSEEEEC
T ss_pred CCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECC-----CCcEEEEEECC-CCCeEE-EEECCCEEEEEC
Confidence 45778889998886433 45667889999874 5789999875 34455667777 124432 455567899988
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCC--CCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+ ++|+++|++|+++.+++.+..+ +...++.|.+.+..+|++...++.|.+-|+.|++.++.|++.
T Consensus 124 gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 124 GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 6 6999999999999999997643 122478888887778999999999999999999999999975
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.85 E-value=1.2e-07 Score=76.94 Aligned_cols=56 Identities=11% Similarity=0.088 Sum_probs=44.5
Q ss_pred EEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeC
Q psy16020 75 VWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNA 132 (151)
Q Consensus 75 Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~ 132 (151)
+..|+ +++|++||..++++.+++++|++ ..+..++++++|- ++|++.|++||+||.
T Consensus 298 lASgS~DgTIkIWDl~tGk~l~tL~gH~~--~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 298 AAAILTSGTIAIWDLLLGQCTALLPPVSD--QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCC----CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEecCCCC--CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 34444 56899999999999999999975 2345688998764 789999999999995
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.85 E-value=3.4e-07 Score=70.62 Aligned_cols=132 Identities=12% Similarity=0.100 Sum_probs=97.9
Q ss_pred CCCceeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeee--CCEEE
Q psy16020 4 PHPTPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAV--YNKVW 76 (151)
Q Consensus 4 ~~~~~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v--~~~Lw 76 (151)
.+.+.++.++. ...+.++.+.+ +++|++..+|.|.+|+...+ +....+..+. +...+..+.+. ++.||
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 172 GNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN-----KILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp TTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT-----EEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred CCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC-----eEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 45667777773 35688888764 57999999999999987521 2334455533 23456677776 46799
Q ss_pred EEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 77 CGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 77 ~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
+++. +.|++||+++++..+.+..... ..+.+++ ..+|++...++.|.+||..+++.++.+....
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~ 314 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAPES-----LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT 314 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSSC-----CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCCC-----ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC
Confidence 9884 6899999999999999986532 3466664 4589999999999999999999999887643
No 131
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.83 E-value=4.2e-07 Score=71.01 Aligned_cols=131 Identities=13% Similarity=0.058 Sum_probs=100.5
Q ss_pred CCCceeeeeeCCCc--eeeeEEeC-CeEEEEec---CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEE
Q psy16020 4 PHPTPYPLNKILDT--ALPPVHVQ-GRVVCALA---DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC 77 (151)
Q Consensus 4 ~~~~~l~~i~l~~~--V~~i~~~~-~~v~vgl~---nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~ 77 (151)
.+++.+.++.++.. ..-|.+.+ +++|++.+ ++.|.+++...+ +....++++....+ -.+++.+++||.
T Consensus 7 ~~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg-----~v~~~i~l~~~~fg-eGi~~~g~~lyv 80 (266)
T 2iwa_A 7 YIVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTG-----KVENIHKMDDSYFG-EGLTLLNEKLYQ 80 (266)
T ss_dssp EEEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTC-----CEEEEEECCTTCCE-EEEEEETTEEEE
T ss_pred cCceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCC-----CEEEEEecCCCcce-EEEEEeCCEEEE
Confidence 35678899998854 56899887 89999976 478999998632 34456677652122 357778999999
Q ss_pred Ee--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 78 GY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 78 g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+. ++.+.++|++|+++.++|..- ..+ . -.+...|..+|+|- .++.|.++|+.|++.+..|.+.
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~i~~g-~~~-g-~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKNFTHQ-MKD-G-WGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEEEECC-SSS-C-CEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred EEecCCEEEEEECCCCcEEEEEECC-CCC-e-EEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEEC
Confidence 99 479999999999999999854 111 2 33666788888876 6899999999999999999875
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.82 E-value=4.8e-07 Score=69.80 Aligned_cols=133 Identities=11% Similarity=0.041 Sum_probs=97.5
Q ss_pred CCCCceeeeeeCCCceeeeEEeC--CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCC-------ceEEEeee-
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHH-------SVRSLAAV- 71 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~-------pV~~m~~v- 71 (151)
..+.+.++.++.+..+..+.+.+ +++|++.. +|.|.+|+...+ +....++++.... ..+++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 150 (353)
T 3vgz_A 76 PVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG-----EVKGRLVLDDRKRTEEVRPLQPRELVADD 150 (353)
T ss_dssp TTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC-----CEEEEEESCCCCCCSSCCCCEEEEEEEET
T ss_pred CCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC-----eeEEEEecCCCccccccCCCCCceEEECC
Confidence 34677888888888888888865 46888766 589999987532 2334566654222 15778886
Q ss_pred -CCEEEEEe---CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 72 -YNKVWCGY---KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 72 -~~~Lw~g~---~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
++.+|++. ++.|++||+++++..+.+..+.. .+..+.+++++ .++....++.|.+||..+.+.++.+..
T Consensus 151 dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 151 ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK---MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL 224 (353)
T ss_dssp TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT---TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC---ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc
Confidence 46799887 35799999999999999885432 57777887553 244556689999999999999988876
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.80 E-value=1.6e-07 Score=79.39 Aligned_cols=135 Identities=19% Similarity=0.235 Sum_probs=94.7
Q ss_pred CCCceeeeeeCC-----CceeeeEEeC-CeEEEEe--cCCcEEEEEcCCCCC----CCCCcceEEEeCCCCCceEEEeee
Q psy16020 4 PHPTPYPLNKIL-----DTALPPVHVQ-GRVVCAL--ADGSVAIFRRGPDGQ----WDLSKYHTVTLGLPHHSVRSLAAV 71 (151)
Q Consensus 4 ~~~~~l~~i~l~-----~~V~~i~~~~-~~v~vgl--~nG~l~v~~~~~~~~----wd~~~~~~i~l~~~~~pV~~m~~v 71 (151)
.+.+++..+... .....+.+-+ +++|+.. .|++|.+|+....+. | +..+.++... ..+..+.+.
T Consensus 354 ~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~--~~v~~l~~~g--~~~~~v~~~ 429 (543)
T 1nir_A 354 KDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW--KKVAELQGQG--GGSLFIKTH 429 (543)
T ss_dssp TTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT--SEEEEEECSC--SCCCCEECC
T ss_pred CCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcC--eEEEEEEcCC--CCceEEEcC
Confidence 456677777652 2233443333 6788875 579999999875332 4 3345556543 556666665
Q ss_pred --CCEEEEEe--------CCeEEEEeCCCCcEE-EEEEec-----CCCCCceeEEEEe--CCEEEEEEc----CCCeEEE
Q psy16020 72 --YNKVWCGY--------KNKIHVVDPKSLVVL-KSFDAH-----PRRESQVRQMTWA--GDGVWVSIR----LDSTLRM 129 (151)
Q Consensus 72 --~~~Lw~g~--------~n~I~vid~~t~~i~-~~~~~h-----~~~~~~I~~m~~~--~~~vwis~~----~d~~l~l 129 (151)
+..||++. ++.|.|||.+|++.. +.+... +.....+.+++++ |.-+|+|.. .++.|.+
T Consensus 430 pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v 509 (543)
T 1nir_A 430 PKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVV 509 (543)
T ss_dssp TTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEE
T ss_pred CCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEE
Confidence 46799998 459999999999987 555321 1223579999998 667798864 5899999
Q ss_pred EeCCccceeeeEe
Q psy16020 130 YNAHTYQHLQDVD 142 (151)
Q Consensus 130 wd~~t~~~l~~id 142 (151)
||.+|+++++.|.
T Consensus 510 ~D~~t~~~~~~i~ 522 (543)
T 1nir_A 510 VDDKTLKLKAVVK 522 (543)
T ss_dssp EETTTTEEEEEEC
T ss_pred EECCCceEEEeec
Confidence 9999999999996
No 134
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.78 E-value=2.9e-07 Score=74.70 Aligned_cols=104 Identities=17% Similarity=0.143 Sum_probs=67.8
Q ss_pred CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeE
Q psy16020 34 DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQ 109 (151)
Q Consensus 34 nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~ 109 (151)
|+.|.+|...++|. ....+.+..+...+-++..++ ..|.-|+ ++.|++||++|++..++|++|...-..+.+
T Consensus 156 d~~V~~~~~s~dG~----~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~ 231 (356)
T 2w18_A 156 DQQVEVMTFAEDGG----GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCH 231 (356)
T ss_dssp TCEEEEEEECTTSC----EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEE
T ss_pred CCcEEEEEECCCCc----eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEE
Confidence 66777777655442 223344444334444455542 3455556 468999999999999999987544457888
Q ss_pred EEEeCCEEE-------------EEEcCCCeEEEEeCCccceeeeE
Q psy16020 110 MTWAGDGVW-------------VSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 110 m~~~~~~vw-------------is~~~d~~l~lwd~~t~~~l~~i 141 (151)
++++++|.. .|++.|.+|++||..+++.+..+
T Consensus 232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 888877763 46788999999999999887654
No 135
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.76 E-value=8.9e-07 Score=69.29 Aligned_cols=126 Identities=8% Similarity=-0.057 Sum_probs=95.6
Q ss_pred ceeeeeeCCCce--eeeEEeCCeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCce-EEEeeeCCEEEEEe--C
Q psy16020 7 TPYPLNKILDTA--LPPVHVQGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWCGY--K 80 (151)
Q Consensus 7 ~~l~~i~l~~~V--~~i~~~~~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV-~~m~~v~~~Lw~g~--~ 80 (151)
+.+.++...... .-|.+.++++|++.++ |.|.+++...+ +....+ +.. .+- -.+++.+++||.+. +
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tg-----kv~~~~-l~~--~~FgeGit~~g~~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESA-----QPVWME-RLG--NIFAEGLASDGERLYQLTWTE 115 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCS-----SCSEEE-ECT--TCCEEEEEECSSCEEEEESSS
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCC-----cEEeEE-CCC--CcceeEEEEeCCEEEEEEccC
Confidence 456667665444 6888999999999887 68888887532 344555 654 332 34777889999999 5
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
+.++|||++|++.+++|..-.. . -.+...+..+|+|- .++.|.++|+.|++.+..|.+..
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~~e-G---wGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYSGE-G---WGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp CEEEEEETTTTEEEEEEECSSC-C---CCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEE
T ss_pred CEEEEEECCcCcEEEEEeCCCc-e---eEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC
Confidence 7999999999999999996432 1 34456788888886 59999999999999999998743
No 136
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.76 E-value=4.4e-07 Score=70.84 Aligned_cols=128 Identities=12% Similarity=0.039 Sum_probs=96.7
Q ss_pred CCceeeeeeCCCce--eeeEEeCCeEEEEecC-C--cEEEEEcCCCCCCCCCcceEEEeCCCCCce-EEEeeeCCEEEEE
Q psy16020 5 HPTPYPLNKILDTA--LPPVHVQGRVVCALAD-G--SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWCG 78 (151)
Q Consensus 5 ~~~~l~~i~l~~~V--~~i~~~~~~v~vgl~n-G--~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV-~~m~~v~~~Lw~g 78 (151)
.++.+.++...... .-|.+.++++|++.++ | .|.+++...+ +....+++.. .+- -.+++.+++||..
T Consensus 30 ~~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tg-----kv~~~~~l~~--~~FgeGit~~g~~ly~l 102 (262)
T 3nol_A 30 DYQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESG-----KTLQQIELGK--RYFGEGISDWKDKIVGL 102 (262)
T ss_dssp EEEEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTC-----CEEEEEECCT--TCCEEEEEEETTEEEEE
T ss_pred ceEEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCC-----cEEEEEecCC--ccceeEEEEeCCEEEEE
Confidence 45667777666444 7788889999999976 4 8999987532 3445566654 332 3477789999999
Q ss_pred e--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 79 Y--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 79 ~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
. ++.++++|++|++.+++|..-.. . -.+...+..+|+|- .++.|.++|+.|++.+..|.+.
T Consensus 103 tw~~~~v~v~D~~t~~~~~ti~~~~e-G---~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 103 TWKNGLGFVWNIRNLRQVRSFNYDGE-G---WGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSSC-C---CCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECE
T ss_pred EeeCCEEEEEECccCcEEEEEECCCC-c---eEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEec
Confidence 9 47999999999999999996432 1 23446677778775 4899999999999999999874
No 137
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.75 E-value=2.7e-07 Score=79.27 Aligned_cols=111 Identities=11% Similarity=0.108 Sum_probs=85.5
Q ss_pred CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEE-eCCCCC-----ceEEEeeeC--CEEEEEeC-CeE
Q psy16020 15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHH-----SVRSLAAVY--NKVWCGYK-NKI 83 (151)
Q Consensus 15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-l~~~~~-----pV~~m~~v~--~~Lw~g~~-n~I 83 (151)
.+.|.++.+.++ .+-++..||++.+|++. + .+. +. +.. .|+++++.. +.|..|+. ++|
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~--~--------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN--K--------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETT--E--------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCC--c--------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 378999999754 69999999999999853 1 222 22 223 599999973 56888884 799
Q ss_pred EEEeCCCCcE-------EEEEEecCC-CCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce
Q psy16020 84 HVVDPKSLVV-------LKSFDAHPR-RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 84 ~vid~~t~~i-------~~~~~~h~~-~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
.+||++++++ .+++..|.. ....|.+++++++| .++.+.|..+++||..+.+.
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSS
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCcc
Confidence 9999999863 678743321 02389999999999 89999999999999988663
No 138
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.74 E-value=9.5e-08 Score=78.45 Aligned_cols=128 Identities=12% Similarity=0.001 Sum_probs=90.9
Q ss_pred eeeCCCceeeeEEeCC--eEE----EEecCCcEEEEEcCCC--CCCCC-CcceEEEe-CCCCCceEEEeeeC---CEEEE
Q psy16020 11 LNKILDTALPPVHVQG--RVV----CALADGSVAIFRRGPD--GQWDL-SKYHTVTL-GLPHHSVRSLAAVY---NKVWC 77 (151)
Q Consensus 11 ~i~l~~~V~~i~~~~~--~v~----vgl~nG~l~v~~~~~~--~~wd~-~~~~~i~l-~~~~~pV~~m~~v~---~~Lw~ 77 (151)
.++++..|.++.+.++ +++ .|..||+|.+|+.... +.+.. +....+.. ..+..+|+++.+.. +.|..
T Consensus 88 ~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 88 LVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred cccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 4566778999999753 566 3556899999987531 11111 11123343 22458999999974 35666
Q ss_pred Ee-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 78 GY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 78 g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id 142 (151)
|+ +++|++||.++++.......|.. .|.++.++++|- +++++.|+.|++||.+ .+....+.
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~---~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLPSTV---AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEECGGG---CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred EECCCeEEEEEcCCCcceeeccCCCC---ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccccc
Confidence 66 46899999999987777777754 899999997654 7899999999999998 55555553
No 139
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.72 E-value=4e-07 Score=72.49 Aligned_cols=137 Identities=12% Similarity=0.151 Sum_probs=89.1
Q ss_pred eeeCCCceeeeEEeC-CeEEEEecCC--------cEEEEEcCCCCCC---CCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020 11 LNKILDTALPPVHVQ-GRVVCALADG--------SVAIFRRGPDGQW---DLSKYHTVTLGLPHHSVRSLAAVYNKVWCG 78 (151)
Q Consensus 11 ~i~l~~~V~~i~~~~-~~v~vgl~nG--------~l~v~~~~~~~~w---d~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g 78 (151)
+.++.-||+|+.+.+ ++++++.+.| .|.+|+...+..- .+.....+.+......|.|+.+.++.+.+|
T Consensus 10 ~~~~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g 89 (365)
T 4h5i_A 10 SYNVGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVG 89 (365)
T ss_dssp EEECSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEE
T ss_pred ecCCCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEE
Confidence 445667999999864 4666665433 4999987643311 011122345655457889999988888887
Q ss_pred e------------CCeEEEEeCCCCcEE----EEEE--ecCCCCCceeEEEEeCCEEE---EEEcCCCeEEEEeCCccce
Q psy16020 79 Y------------KNKIHVVDPKSLVVL----KSFD--AHPRRESQVRQMTWAGDGVW---VSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 79 ~------------~n~I~vid~~t~~i~----~~~~--~h~~~~~~I~~m~~~~~~vw---is~~~d~~l~lwd~~t~~~ 137 (151)
+ ++.+.+|+.++.+-. .... .+.+.+..+..++++++|-+ .|.+.|++|++||++++++
T Consensus 90 ~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 90 CNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp CCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred ECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence 5 235788876554322 1111 12333457899999988753 3556799999999999999
Q ss_pred eeeEeCCccc
Q psy16020 138 LQDVDIEPYV 147 (151)
Q Consensus 138 l~~idi~~~v 147 (151)
+.+++-...|
T Consensus 170 ~~~~~~~~~V 179 (365)
T 4h5i_A 170 KFEIETRGEV 179 (365)
T ss_dssp EEEEECSSCC
T ss_pred EEEeCCCCce
Confidence 9888644433
No 140
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.69 E-value=1.1e-06 Score=75.40 Aligned_cols=113 Identities=11% Similarity=0.045 Sum_probs=84.2
Q ss_pred ceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcc-----eEEEe--CCCCCceEEEeeeCCEEEEEe-CCeEEEE
Q psy16020 17 TALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKY-----HTVTL--GLPHHSVRSLAAVYNKVWCGY-KNKIHVV 86 (151)
Q Consensus 17 ~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~-----~~i~l--~~~~~pV~~m~~v~~~Lw~g~-~n~I~vi 86 (151)
+|.++.++++ .+++|..||+|.+|+...+ .+..| +.++. +++..+|.+++...+.+.+++ ++.|++|
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~---~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlW 207 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKN---SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSM 207 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCC---TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCC---ccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEE
Confidence 5999998754 7999999999999998642 22223 33332 334579999999865566666 4689999
Q ss_pred eCCCCcE---EEEEE-ecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce
Q psy16020 87 DPKSLVV---LKSFD-AHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 87 d~~t~~i---~~~~~-~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
|..+.+. .+++. +|.. .|..++++| ...++++ ++.|++||..+.+.
T Consensus 208 d~~~~~~~~~~~tL~~~h~~---~V~svaFsg-~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 208 TVSASSHQPVSRMIQNASRR---KITDLKIVD-YKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp CCCSSSSCCCEEEEECCCSS---CCCCEEEET-TEEEEEC-SSEEEEEETTTTEE
T ss_pred ECCCCccccceeeecccccC---cEEEEEEEC-CEEEEEe-CCeEEEEECCCCeE
Confidence 9998773 46774 6654 899999995 5566776 69999999997666
No 141
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.61 E-value=5.8e-06 Score=65.31 Aligned_cols=137 Identities=12% Similarity=0.050 Sum_probs=92.3
Q ss_pred CCceeeeeeCCCce------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCC-CCCceE-EEeeeCCEE
Q psy16020 5 HPTPYPLNKILDTA------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGL-PHHSVR-SLAAVYNKV 75 (151)
Q Consensus 5 ~~~~l~~i~l~~~V------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~-~~~pV~-~m~~v~~~L 75 (151)
..+.+|+.++++.+ ......+++||++..+|.|..|+...+. .|..+.+....... ...++. .....++.|
T Consensus 27 ~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (376)
T 3q7m_A 27 TPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHV 106 (376)
T ss_dssp CCEEEEEECCTTTTTTSCCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEE
T ss_pred cceEEeEEecCCCccccceeeccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEE
Confidence 45788999988532 2556678999999999999999975322 34322211100000 013443 344568999
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
|+++. +.|+.+|++|++..-++...... .......++.+| ....++.|..+|++|++.+...+...
T Consensus 107 ~v~~~~g~l~a~d~~tG~~~W~~~~~~~~---~~~p~~~~~~v~-v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 107 YIGSEKAQVYALNTSDGTVAWQTKVAGEA---LSRPVVSDGLVL-IHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSCC---CSCCEEETTEEE-EECTTSEEEEEETTTCCEEEEEECCC
T ss_pred EEEcCCCEEEEEECCCCCEEEEEeCCCce---EcCCEEECCEEE-EEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 99996 58999999999998777765331 222234466666 45678899999999999998887643
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.59 E-value=2.4e-06 Score=65.10 Aligned_cols=131 Identities=18% Similarity=0.226 Sum_probs=93.9
Q ss_pred CCCCceeeeeeCCC---ceeeeEEeCC--eEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCC---CCceEEEeee--
Q psy16020 3 YPHPTPYPLNKILD---TALPPVHVQG--RVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLP---HHSVRSLAAV-- 71 (151)
Q Consensus 3 ~~~~~~l~~i~l~~---~V~~i~~~~~--~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~---~~pV~~m~~v-- 71 (151)
..+.+.++.+.++. .+.++.+.++ ++|++.. +|.|.+|+.... +....+.++.+ ...+.++.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~d 92 (337)
T 1pby_B 18 TEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-----ETLGRIDLSTPEERVKSLFGAALSPD 92 (337)
T ss_dssp TTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC-----CEEEEEECCBTTEEEECTTCEEECTT
T ss_pred CCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC-----CeEeeEEcCCcccccccccceEECCC
Confidence 34667888999987 7889988653 6777654 679999987521 22234555421 0145667775
Q ss_pred CCEEEEEe-------------CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccc
Q psy16020 72 YNKVWCGY-------------KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 72 ~~~Lw~g~-------------~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~ 136 (151)
++.||++. .+.|++||+++++..+.+... ..+..+.+++++ ++++ ++.|++||..+.+
T Consensus 93 g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~ 165 (337)
T 1pby_B 93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP----RQITMLAWARDGSKLYGL---GRDLHVMDPEAGT 165 (337)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC----SSCCCEEECTTSSCEEEE---SSSEEEEETTTTE
T ss_pred CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC----CCcceeEECCCCCEEEEe---CCeEEEEECCCCc
Confidence 35799885 479999999999999888853 257788888665 4444 6889999999999
Q ss_pred eeeeEeCCc
Q psy16020 137 HLQDVDIEP 145 (151)
Q Consensus 137 ~l~~idi~~ 145 (151)
....+....
T Consensus 166 ~~~~~~~~~ 174 (337)
T 1pby_B 166 LVEDKPIQS 174 (337)
T ss_dssp EEEEECSTT
T ss_pred Eeeeeeccc
Confidence 988876543
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.57 E-value=3.7e-06 Score=64.52 Aligned_cols=130 Identities=13% Similarity=0.096 Sum_probs=93.6
Q ss_pred CCCceeeeeeCCCceeeeEEeCC--eEEEEecC-Cc-EEEEEcCCCCCC-CCCcceEEEeCCCCCceEEEeeeC--CEEE
Q psy16020 4 PHPTPYPLNKILDTALPPVHVQG--RVVCALAD-GS-VAIFRRGPDGQW-DLSKYHTVTLGLPHHSVRSLAAVY--NKVW 76 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~~~--~v~vgl~n-G~-l~v~~~~~~~~w-d~~~~~~i~l~~~~~pV~~m~~v~--~~Lw 76 (151)
.+.+.+..++.+..+.++.+.++ ++|++..+ +. |.+|+...+|.. +.. ...+..+ ...+++.+.. +.||
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~---~~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 116 LKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFISGG---TRPFNITFTPDGNFAF 191 (331)
T ss_dssp TTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEECSS---SSEEEEEECTTSSEEE
T ss_pred CCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-CccccCC---CCccceEECCCCCEEE
Confidence 45677788888888889988765 58887554 78 999998765531 111 1222222 4457888863 4699
Q ss_pred EEeC--CeEEEEeCCCCcE---EEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccce--eeeE
Q psy16020 77 CGYK--NKIHVVDPKSLVV---LKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQH--LQDV 141 (151)
Q Consensus 77 ~g~~--n~I~vid~~t~~i---~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~--l~~i 141 (151)
+++. +.|++||+++++. .+++..+ ..+..|.++++| +|++...++.|.+||..+++. ++.+
T Consensus 192 v~~~~~~~v~v~d~~~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~ 261 (331)
T 3u4y_A 192 VANLIGNSIGILETQNPENITLLNAVGTN----NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSF 261 (331)
T ss_dssp EEETTTTEEEEEECSSTTSCEEEEEEECS----SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred EEeCCCCeEEEEECCCCcccceeeeccCC----CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccc
Confidence 9883 6899999999998 7777754 367888888554 577777889999999998877 4444
No 144
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.54 E-value=1.1e-05 Score=66.12 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=90.7
Q ss_pred eeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe-CCeEEEEe
Q psy16020 9 YPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY-KNKIHVVD 87 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~I~vid 87 (151)
...+.+|+ |..|.+.++.++++ .+|.|.+|+..+ +.....++... .++.++......+.++. ++.|++||
T Consensus 82 ~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~s-----l~~~~~~~~~~--~~v~~i~~~~p~~av~~~dG~L~v~d 152 (388)
T 1xip_A 82 KWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLEE-----LSEFRTVTSFE--KPVFQLKNVNNTLVILNSVNDLSALD 152 (388)
T ss_dssp SEEEECTT-EEEEEEETTEEEEE-ESSEEEEEESSS-----TTCEEEEEECS--SCEEEEEECSSEEEEEETTSEEEEEE
T ss_pred eEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEchh-----hhccCccceee--cceeeEEecCCCEEEEECCCCEEEEE
Confidence 35667899 99999977789998 899999999763 22333444444 77888877766666655 57999999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce--eeeEeC
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH--LQDVDI 143 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~--l~~idi 143 (151)
.++++.++ +. ..|+++++++.| .+.+..|+.+++|+..+++. ..+|..
T Consensus 153 l~~~~~~~----~~---~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~ 202 (388)
T 1xip_A 153 LRTKSTKQ----LA---QNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSL 202 (388)
T ss_dssp TTTCCEEE----EE---ESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred ccCCcccc----cc---CCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecC
Confidence 99988764 21 389999999999 67788899999999988776 667743
No 145
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.53 E-value=7.9e-06 Score=64.53 Aligned_cols=133 Identities=8% Similarity=-0.067 Sum_probs=91.2
Q ss_pred CCCCceeeeeeCCC----------ce-eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEee
Q psy16020 3 YPHPTPYPLNKILD----------TA-LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA 70 (151)
Q Consensus 3 ~~~~~~l~~i~l~~----------~V-~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~ 70 (151)
..+.+.+|+.+++. .+ ..+...+++||++..+|.|..|+...+. .| ..+++. ........
T Consensus 70 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W------~~~~~~--~~~~~p~~ 141 (376)
T 3q7m_A 70 ADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAW------QTKVAG--EALSRPVV 141 (376)
T ss_dssp TTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEE------EEECSS--CCCSCCEE
T ss_pred ccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEE------EEeCCC--ceEcCCEE
Confidence 35678899998842 23 3456678999999999999999975322 24 334433 22222345
Q ss_pred eCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCC--CceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 71 VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRE--SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 71 v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~--~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.++.||+++. +.|+.+|++|++..-++....... .........++.+|+ +..++.|..+|..+++.+.+.+..
T Consensus 142 ~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 142 SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVV-GGDNGRVSAVLMEQGQMIWQQRIS 217 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEE-CCTTTEEEEEETTTCCEEEEEECC
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEE-EcCCCEEEEEECCCCcEEEEEecc
Confidence 6899999985 589999999999988877543210 001233444666665 567889999999999998887654
No 146
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.50 E-value=1.9e-05 Score=67.40 Aligned_cols=135 Identities=10% Similarity=0.003 Sum_probs=98.3
Q ss_pred CCCCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-----C-CE
Q psy16020 3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-----Y-NK 74 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-----~-~~ 74 (151)
..+.+.+.+|.+...+..+.+.+ +++|++..+|.|.+|+.... ..+....+++|. .| +.|.+. + +.
T Consensus 184 ~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~---t~~~v~~i~~G~--~P-~~ia~s~~~~pDGk~ 257 (567)
T 1qks_A 184 GSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK---EPTTVAEIKIGS--EA-RSIETSKMEGWEDKY 257 (567)
T ss_dssp TTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSS---SCCEEEEEECCS--EE-EEEEECCSTTCTTTE
T ss_pred CCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCC---CCcEeEEEecCC--CC-ceeEEccccCCCCCE
Confidence 35678889999888888888864 47999999999999997310 223445677775 55 577776 3 57
Q ss_pred EEEEe--CCeEEEEeCCCCcEEEEEEecC----------CC---------------------------------------
Q psy16020 75 VWCGY--KNKIHVVDPKSLVVLKSFDAHP----------RR--------------------------------------- 103 (151)
Q Consensus 75 Lw~g~--~n~I~vid~~t~~i~~~~~~h~----------~~--------------------------------------- 103 (151)
+|+++ .++|.|||+.|+++.+++.... ..
T Consensus 258 l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~ 337 (567)
T 1qks_A 258 AIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE 337 (567)
T ss_dssp EEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE
T ss_pred EEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeee
Confidence 99988 4899999999999999877421 10
Q ss_pred ---CCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 104 ---ESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 104 ---~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
....+.+.+++ ..++++...++.|.++|+.+.+.+..+++
T Consensus 338 i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 338 ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 00112333443 34577888899999999999999998887
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.49 E-value=2.5e-06 Score=69.89 Aligned_cols=113 Identities=18% Similarity=0.129 Sum_probs=81.9
Q ss_pred CCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeC
Q psy16020 15 LDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDP 88 (151)
Q Consensus 15 ~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~ 88 (151)
.++|.++.++++ .+.+|..||+|.+|+.... ........+..+|+|+... ++.|++|+. ++|++||+
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-------~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~ 221 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-------VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLP 221 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-------EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-------cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence 479999999753 5777999999999987532 1122222234799999997 467998985 58999999
Q ss_pred CCCcEEEEEEecCCCC----CceeEEEEeCCEEEE---EEcC-----CCeEEEEeCCcc
Q psy16020 89 KSLVVLKSFDAHPRRE----SQVRQMTWAGDGVWV---SIRL-----DSTLRMYNAHTY 135 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~----~~I~~m~~~~~~vwi---s~~~-----d~~l~lwd~~t~ 135 (151)
+ ++..+++..|.... ..|.++.+.+++.++ +..+ ...+++||.++.
T Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 222 T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred C-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 8 77888887775422 278999999887766 2222 235999999864
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.48 E-value=1.9e-05 Score=60.43 Aligned_cols=119 Identities=7% Similarity=-0.021 Sum_probs=87.7
Q ss_pred CCCceeeeeeCC-CceeeeEEeC--CeEEEEec-CCcEEEEEcCCCCCCCCCc-ceEEEeCCCCCceEEEeee--CCEEE
Q psy16020 4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSK-YHTVTLGLPHHSVRSLAAV--YNKVW 76 (151)
Q Consensus 4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~wd~~~-~~~i~l~~~~~pV~~m~~v--~~~Lw 76 (151)
.+.+.+..+..+ ..+ ++.+.+ +++|++.. ++.|.+|+...+ +. ...+..+. .|..++.+. ++.|+
T Consensus 28 ~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~--~~~~~~~~s~dg~~l~ 99 (331)
T 3u4y_A 28 DTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE-----PPKVVAIQEGQ--SSMADVDITPDDQFAV 99 (331)
T ss_dssp TTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS-----SCEEEEEEECS--SCCCCEEECTTSSEEE
T ss_pred cccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC-----ceeEEecccCC--CCccceEECCCCCEEE
Confidence 456777788876 455 887754 35888876 789999987532 12 34455555 777757775 35788
Q ss_pred EEeCC----eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCe-EEEEeCCc
Q psy16020 77 CGYKN----KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDST-LRMYNAHT 134 (151)
Q Consensus 77 ~g~~n----~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~-l~lwd~~t 134 (151)
++.++ .|++||+++++..+.+..+. ..+.+.++++| ++++...+.. |++|+...
T Consensus 100 ~~~~~~~~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 100 TVTGLNHPFNMQSYSFLKNKFISTIPIPY----DAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp ECCCSSSSCEEEEEETTTTEEEEEEECCT----TEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred EecCCCCcccEEEEECCCCCeEEEEECCC----CccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 77765 89999999999999888653 56899999775 6778788788 99999775
No 149
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.45 E-value=2.8e-06 Score=68.05 Aligned_cols=119 Identities=11% Similarity=0.075 Sum_probs=72.6
Q ss_pred CceeeeEEeC----------CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-C
Q psy16020 16 DTALPPVHVQ----------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-N 81 (151)
Q Consensus 16 ~~V~~i~~~~----------~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n 81 (151)
+.|.++.+.+ +.+..|..|++|.+|+...++ ....+..+..||.++.+.. +.|..|+. +
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~ 209 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-------PILAGYPLSSPGISVQFRPSNPNQLIVGERNG 209 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-------EEEEEEECSSCEEEEEEETTEEEEEEEEETTS
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-------eeeeecCCCCCcEEEEECCCCCceEEecCCCC
Confidence 6899999863 356677889999999874221 2223322348999999974 24777774 6
Q ss_pred eEEEEeCCCCcEEEEEEecCC----------------------CCCceeEEEEe-CC-EEEEEEcCCCeEEEEeCCccce
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPR----------------------RESQVRQMTWA-GD-GVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~----------------------~~~~I~~m~~~-~~-~vwis~~~d~~l~lwd~~t~~~ 137 (151)
.|++||.++++...++..+.. ....|.++.+. .+ ...++++.|+.+++||..+.+.
T Consensus 210 ~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 210 NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 899999999886655442211 12367777776 23 3478999999999999998776
Q ss_pred eeeE
Q psy16020 138 LQDV 141 (151)
Q Consensus 138 l~~i 141 (151)
...+
T Consensus 290 ~~~l 293 (393)
T 4gq1_A 290 YNEI 293 (393)
T ss_dssp ----
T ss_pred CceE
Confidence 6655
No 150
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.43 E-value=1.7e-05 Score=60.46 Aligned_cols=134 Identities=13% Similarity=0.135 Sum_probs=87.4
Q ss_pred ceeeeeeCCCceeeeEEeCC--eEEEEe-cCCcEEEEEcCCCCCCCCCcce--EEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020 7 TPYPLNKILDTALPPVHVQG--RVVCAL-ADGSVAIFRRGPDGQWDLSKYH--TVTLGLPHHSVRSLAAVY--NKVWCGY 79 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~~--~v~vgl-~nG~l~v~~~~~~~~wd~~~~~--~i~l~~~~~pV~~m~~v~--~~Lw~g~ 79 (151)
+.+..+.....+.++.+.++ ++|++. .+|.|.+|+...++.. .... .+.... ...++++.+.. +.||+++
T Consensus 120 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 120 GVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL--VAQDPAEVTTVE-GAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp EEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEEECST-TCCEEEEEECTTSSEEEEEE
T ss_pred cccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce--eeecccccccCC-CCCcceEEECCCCCEEEEEe
Confidence 34455555567888888754 688887 8999999998754432 1111 223322 25677888863 4688877
Q ss_pred --CCeEEEEeCC--CCcE--EEEEEecCC---CCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC----ccceeeeEeC
Q psy16020 80 --KNKIHVVDPK--SLVV--LKSFDAHPR---RESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH----TYQHLQDVDI 143 (151)
Q Consensus 80 --~n~I~vid~~--t~~i--~~~~~~h~~---~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~----t~~~l~~idi 143 (151)
+++|++||.+ +++. .+.+...+. ....+..+.+++++ ++++.+.++.|++||.. +.+.+..+..
T Consensus 197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 275 (343)
T 1ri6_A 197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT 275 (343)
T ss_dssp TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC
Confidence 3689999984 4544 333432211 12357788888654 67788899999999998 4566666654
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.40 E-value=1.1e-05 Score=61.47 Aligned_cols=114 Identities=8% Similarity=0.070 Sum_probs=78.9
Q ss_pred CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC--CeEEEEeCCCCcEEEEEEecC
Q psy16020 26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPKSLVVLKSFDAHP 101 (151)
Q Consensus 26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~ 101 (151)
+.++++..+|+|.+|+.... +....+.++.....++++.+.. +.+|+++. +.|++||+.+++..+++....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-----AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-----EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB
T ss_pred cEEEEcCCCCeEEEEECCCC-----cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC
Confidence 36788889999999987521 2334455553111467777763 47888774 589999999999998887532
Q ss_pred CC--CCceeEEEEeCCE--EEEEEc-----------CCCeEEEEeCCccceeeeEeCC
Q psy16020 102 RR--ESQVRQMTWAGDG--VWVSIR-----------LDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 102 ~~--~~~I~~m~~~~~~--vwis~~-----------~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.. ...+..+.++++| ++++.. .++.|++||..+.+.++.+...
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 134 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP 134 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC
Confidence 10 1246678888665 444431 5799999999999998888654
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.39 E-value=7.8e-06 Score=62.65 Aligned_cols=131 Identities=14% Similarity=0.070 Sum_probs=88.4
Q ss_pred CCCCceeeeeeCCC--ceeeeEEeCC--eEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCC----CCceEEEeee--
Q psy16020 3 YPHPTPYPLNKILD--TALPPVHVQG--RVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLP----HHSVRSLAAV-- 71 (151)
Q Consensus 3 ~~~~~~l~~i~l~~--~V~~i~~~~~--~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~----~~pV~~m~~v-- 71 (151)
..+.+.++.+.++. .+..+.+.++ ++|++. .+|.|.+|+... + +....++++.. ...++++.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-~----~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 28 VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-C----KNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp TTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-T----EEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred CCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC-C----cEEEEEEcccccccccccccceEECCC
Confidence 35677888898887 7888887643 587775 578999998642 1 22234455431 1226777775
Q ss_pred CCEEEEEe-------------CCeEEEEeCCCCcE---EEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcc
Q psy16020 72 YNKVWCGY-------------KNKIHVVDPKSLVV---LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 72 ~~~Lw~g~-------------~n~I~vid~~t~~i---~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~ 135 (151)
++.|+++. .+.|++||+++++. .+.+..+ ..+.++.++++|-++..+. .|++||..++
T Consensus 103 g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~ 176 (349)
T 1jmx_B 103 GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP----RQVYLMRAADDGSLYVAGP--DIYKMDVKTG 176 (349)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC----SSCCCEEECTTSCEEEESS--SEEEECTTTC
T ss_pred CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC----CcccceeECCCCcEEEccC--cEEEEeCCCC
Confidence 35788888 47999999998554 3444432 2688888886653333443 3999999999
Q ss_pred ceeeeEeCC
Q psy16020 136 QHLQDVDIE 144 (151)
Q Consensus 136 ~~l~~idi~ 144 (151)
+..+.+...
T Consensus 177 ~~~~~~~~~ 185 (349)
T 1jmx_B 177 KYTVALPLR 185 (349)
T ss_dssp CEEEEECST
T ss_pred ceecccccc
Confidence 998887654
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.36 E-value=5.6e-06 Score=63.46 Aligned_cols=91 Identities=9% Similarity=0.017 Sum_probs=60.5
Q ss_pred CCCceeeeeeCCCc-------eeeeEEeCC--eEEEEecC------------CcEEEEEcCCCCCCCCCcceEEEeCCCC
Q psy16020 4 PHPTPYPLNKILDT-------ALPPVHVQG--RVVCALAD------------GSVAIFRRGPDGQWDLSKYHTVTLGLPH 62 (151)
Q Consensus 4 ~~~~~l~~i~l~~~-------V~~i~~~~~--~v~vgl~n------------G~l~v~~~~~~~~wd~~~~~~i~l~~~~ 62 (151)
.+.+.++.++++.. +.++.+.++ ++|++..+ +.|.+|+...+.. ......... .
T Consensus 73 ~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~---~ 147 (349)
T 1jmx_B 73 DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE--AKPVRTFPM---P 147 (349)
T ss_dssp TTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG--BCCSEEEEC---C
T ss_pred CCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc--cceeeeccC---C
Confidence 45667777877643 778887643 78888865 8999998753110 111122222 2
Q ss_pred CceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEEec
Q psy16020 63 HSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 63 ~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~~h 100 (151)
..+.++.+. ++++|++ ++.|++||++++++.+.+..+
T Consensus 148 ~~~~~~~~s~dg~l~~~-~~~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 148 RQVYLMRAADDGSLYVA-GPDIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp SSCCCEEECTTSCEEEE-SSSEEEECTTTCCEEEEECST
T ss_pred CcccceeECCCCcEEEc-cCcEEEEeCCCCceecccccc
Confidence 457788775 3458885 555999999999998888754
No 154
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.32 E-value=1.4e-05 Score=65.45 Aligned_cols=112 Identities=8% Similarity=-0.016 Sum_probs=85.1
Q ss_pred eCCeEEEEec-----CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020 24 VQGRVVCALA-----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (151)
Q Consensus 24 ~~~~v~vgl~-----nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v 85 (151)
..+++||+-. +|.|.+++.. ..+....+++|. .| . |++. +++||+++ .|.|.+
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~-----t~~v~~~I~vG~--~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGE-----AGRVIGMIDGGF--LP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETT-----TTEEEEEEEECS--SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEEcCcccCCCCEEEEEECC-----CCeEEEEEECCC--CC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 4678999976 5799999875 234556788887 77 4 7776 36699987 367999
Q ss_pred EeCCCCcEEEEEEecCC----CCCceeEEEEeCC--EEEEEEcC-CCeEEEEeCCccceeeeEeCC
Q psy16020 86 VDPKSLVVLKSFDAHPR----RESQVRQMTWAGD--GVWVSIRL-DSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~----~~~~I~~m~~~~~--~vwis~~~-d~~l~lwd~~t~~~l~~idi~ 144 (151)
||+.|+++.+++..... .......+.++++ .+|++-.. ++.|.++|+.+.+.+++|++.
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 99999999999986421 1124566777744 56777654 799999999999999999763
No 155
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.32 E-value=1.4e-05 Score=60.94 Aligned_cols=111 Identities=9% Similarity=0.081 Sum_probs=75.8
Q ss_pred CeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC--CCcE--EEE
Q psy16020 26 GRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK--SLVV--LKS 96 (151)
Q Consensus 26 ~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~--t~~i--~~~ 96 (151)
+.+|++ ..+|.|.+|+....|.. .....+.. ..++.++.+. ++.|++++. +.|.+||.+ +++. ...
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGAL--TLTQVVDV---PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEC---SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcE--EEeeeEec---CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence 468888 67999999998644422 11122222 2567788886 356998885 689998876 6654 445
Q ss_pred EEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeC---CccceeeeEeCCc
Q psy16020 97 FDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNA---HTYQHLQDVDIEP 145 (151)
Q Consensus 97 ~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~---~t~~~l~~idi~~ 145 (151)
+..+. .+..+++++++ ++++...++.|++||. .+.+..+.+...+
T Consensus 80 ~~~~~----~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 129 (343)
T 1ri6_A 80 SALPG----SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 129 (343)
T ss_dssp EECSS----CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT
T ss_pred cccCC----CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC
Confidence 55432 67888888654 6777788999999999 6667777665433
No 156
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.22 E-value=1.2e-05 Score=64.14 Aligned_cols=110 Identities=13% Similarity=0.183 Sum_probs=80.1
Q ss_pred CCeEEEEe------cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020 25 QGRVVCAL------ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (151)
Q Consensus 25 ~~~v~vgl------~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v 85 (151)
++++|+.- .+|.|.+|+... + +....++.+. .| .+++. ++.||+++ ++.|.+
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t-~----~~~~~i~~g~--~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v 85 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTN-G----KFLGMVPTAF--NG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTT-C----CEEEEEECCE--EE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred CCEEEEECCCCCccccCeEEEEECCC-C----eEEEEecCCC--CC--ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence 45788874 478999998642 2 2335667765 77 77776 46799987 256999
Q ss_pred EeCCCCcEEEEEEecCCC---CCceeEEEEeCCE--EEEEEcC-CCeEEEEeCCccceeee-EeC
Q psy16020 86 VDPKSLVVLKSFDAHPRR---ESQVRQMTWAGDG--VWVSIRL-DSTLRMYNAHTYQHLQD-VDI 143 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~---~~~I~~m~~~~~~--vwis~~~-d~~l~lwd~~t~~~l~~-idi 143 (151)
||+.++++.+++...... ......|.++++| ++++-.. ++.|.+||+.+.+.+.+ |++
T Consensus 86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~ 150 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA 150 (361)
T ss_dssp EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG
T ss_pred EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC
Confidence 999999999999865211 2356778887555 5656544 78999999999999988 654
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.11 E-value=0.00046 Score=53.31 Aligned_cols=117 Identities=13% Similarity=0.058 Sum_probs=76.8
Q ss_pred CCceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCC-------CCceEEEeee-CCEEEEEe--CC
Q psy16020 15 LDTALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLP-------HHSVRSLAAV-YNKVWCGY--KN 81 (151)
Q Consensus 15 ~~~V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-------~~pV~~m~~v-~~~Lw~g~--~n 81 (151)
...+..|.+.+ +++|++. .+|++.+|+...+|.. .....+..... ...+.++++. ++++|++. ++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL--TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE--EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe--eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 35677777664 3688888 6799999998755532 22222332211 1237788886 34588876 36
Q ss_pred eEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC
Q psy16020 82 KIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 82 ~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~ 133 (151)
+|++||.+ ++++.............+..++++++| ++++...++.+++|+..
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 89999988 666544332222223468889999665 67788899999999977
No 158
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.10 E-value=6.2e-05 Score=65.25 Aligned_cols=142 Identities=13% Similarity=0.037 Sum_probs=92.9
Q ss_pred CCCceeeeeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeC---CCCCceEEEeeeCCEEE
Q psy16020 4 PHPTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG---LPHHSVRSLAAVYNKVW 76 (151)
Q Consensus 4 ~~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~---~~~~pV~~m~~v~~~Lw 76 (151)
...+.+|+.++++. -..-...++.||++..+|.|..++...+. .|..+........ .....-+.+++.+++|+
T Consensus 53 ~~~~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~ 132 (677)
T 1kb0_A 53 KDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVY 132 (677)
T ss_dssp GGEEEEEEEECCCCSCCCCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEE
T ss_pred cCccEEEEEECCCCCCceeCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEE
Confidence 34577899988742 23344578999999999999999875322 3543321100000 00011244566789999
Q ss_pred EEeC-CeEEEEeCCCCcEEEEEEecCCC--CCce-eEEEEeCCEEEEEEcC-----CCeEEEEeCCccceeeeEeCCc
Q psy16020 77 CGYK-NKIHVVDPKSLVVLKSFDAHPRR--ESQV-RQMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 77 ~g~~-n~I~vid~~t~~i~~~~~~h~~~--~~~I-~~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l~~idi~~ 145 (151)
+++. ++++.+|++|+++.-++..+.+. ...+ ..-...++.|++..+. ++.|+.||++|++.+..++..+
T Consensus 133 v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~ 210 (677)
T 1kb0_A 133 VGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVP 210 (677)
T ss_dssp EECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred EEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCC
Confidence 9984 69999999999999888865110 0111 1222346777766553 7999999999999999998754
No 159
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.09 E-value=5.8e-05 Score=57.72 Aligned_cols=123 Identities=13% Similarity=0.058 Sum_probs=82.6
Q ss_pred CceeeeeeCCC-ceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeCCe
Q psy16020 6 PTPYPLNKILD-TALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKNK 82 (151)
Q Consensus 6 ~~~l~~i~l~~-~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~n~ 82 (151)
.+.+|....+. .+.++... ++.+|+|..+|.|..|+.. |. ......+.. ..+.++.. .++.||+|+ +.
T Consensus 126 g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~--g~----~~~~~~~~~--~~~~~~~~d~~g~l~v~t-~~ 196 (330)
T 3hxj_A 126 GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD--GT----EKWRFKTND--AITSAASIGKDGTIYFGS-DK 196 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT--SC----EEEEEECSS--CCCSCCEECTTCCEEEES-SS
T ss_pred CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC--CC----EeEEEecCC--CceeeeEEcCCCEEEEEe-CE
Confidence 45677777664 44555555 6789999988989888765 31 112334433 56667766 468899999 99
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
|+.+| .+++...++.... ..+.++...++ .+|++.. ++.|..+|. +.+.+..+..
T Consensus 197 l~~~d-~~g~~~~~~~~~~---~~~~~~~~~~~g~l~v~t~-~~gl~~~~~-~g~~~~~~~~ 252 (330)
T 3hxj_A 197 VYAIN-PDGTEKWNFYAGY---WTVTRPAISEDGTIYVTSL-DGHLYAINP-DGTEKWRFKT 252 (330)
T ss_dssp EEEEC-TTSCEEEEECCSS---CCCSCCEECTTSCEEEEET-TTEEEEECT-TSCEEEEEEC
T ss_pred EEEEC-CCCcEEEEEccCC---cceeceEECCCCeEEEEcC-CCeEEEECC-CCCEeEEeeC
Confidence 99999 7777766665443 36778888866 6687655 556666675 4666666553
No 160
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.06 E-value=6.7e-05 Score=62.07 Aligned_cols=112 Identities=9% Similarity=-0.008 Sum_probs=85.2
Q ss_pred eCCeEEEEecC-----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020 24 VQGRVVCALAD-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (151)
Q Consensus 24 ~~~~v~vgl~n-----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v 85 (151)
.++++||+-.+ |+|.+++.. +.+....+++|. .| .|.+. +++||++. +|.|.+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~-----t~~vv~~I~vG~--~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsv 153 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGS-----TGRILGMTDGGF--LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEV 153 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETT-----TTEEEEEEEECS--SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECC-----CCEEEEEEECCC--CC--ceEECCCCCEEEEEeccccccccCCCCCEEEE
Confidence 56789999874 699999875 345667889997 78 67776 36799987 368999
Q ss_pred EeCCCCcEEEEEEec-C-CC--CCceeEEEEeCC--EEEEEEcC-CCeEEEEeCCccceeeeEeCC
Q psy16020 86 VDPKSLVVLKSFDAH-P-RR--ESQVRQMTWAGD--GVWVSIRL-DSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 86 id~~t~~i~~~~~~h-~-~~--~~~I~~m~~~~~--~vwis~~~-d~~l~lwd~~t~~~l~~idi~ 144 (151)
||+.|+++.+++..- . +. ......|.++++ .+|++-.. ++.|.+.|+.+.+.+.+|++.
T Consensus 154 iD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 154 FDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 999999999999853 1 10 123556677755 46776554 789999999999999999874
No 161
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.01 E-value=0.00029 Score=60.01 Aligned_cols=108 Identities=8% Similarity=0.059 Sum_probs=82.4
Q ss_pred CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCC--CCcEEEEEE
Q psy16020 25 QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPK--SLVVLKSFD 98 (151)
Q Consensus 25 ~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~--t~~i~~~~~ 98 (151)
.+.+||+.. +|+|.+++.... +....+++|. . +..+.+. ++.||++++ +.|++||+. ++++..++.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~-----~v~~~i~~g~--~-p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTY-----EIKTVLDTGY--A-VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTC-----CEEEEEECSS--C-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCC-----eEEEEEeCCC--C-ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 456777764 578999987521 3345667764 3 3467775 467999985 699999996 999999988
Q ss_pred ecCCCCCceeEEEEe------CCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 99 AHPRRESQVRQMTWA------GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 99 ~h~~~~~~I~~m~~~------~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
... ....|.++ |..++++...++.+.++|+.|++.++.|.+.
T Consensus 238 ~G~----~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 238 IGS----EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp CCS----EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC
T ss_pred cCC----CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecc
Confidence 653 45788887 3457888889999999999999999999864
No 162
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.00 E-value=0.0002 Score=57.57 Aligned_cols=66 Identities=14% Similarity=0.103 Sum_probs=54.5
Q ss_pred CCEEEEEeC-----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEc-CCCeEEEEeCCccce
Q psy16020 72 YNKVWCGYK-----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQH 137 (151)
Q Consensus 72 ~~~Lw~g~~-----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~-~d~~l~lwd~~t~~~ 137 (151)
+++||++.. +.|.|||++|+++.+++.... ....|.++++| .|++.. .++.|.+||+.|++.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~----~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH----DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC----CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 478999863 579999999999999997542 57888888664 466666 699999999999999
Q ss_pred eeeE
Q psy16020 138 LQDV 141 (151)
Q Consensus 138 l~~i 141 (151)
++.|
T Consensus 354 v~~i 357 (373)
T 2mad_H 354 DQST 357 (373)
T ss_pred Eeee
Confidence 9984
No 163
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.98 E-value=0.00013 Score=55.77 Aligned_cols=119 Identities=10% Similarity=0.027 Sum_probs=78.3
Q ss_pred CCceeeeeeCC-CceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCC
Q psy16020 5 HPTPYPLNKIL-DTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKN 81 (151)
Q Consensus 5 ~~~~l~~i~l~-~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n 81 (151)
..+.+|....+ ..+.++...+ +.+|+|..+|.|..|+.. |. ......... ..+.++... ++.||+|+.+
T Consensus 203 ~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~--g~----~~~~~~~~~--~~~~~~~~~~~g~l~v~t~~ 274 (330)
T 3hxj_A 203 DGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD--GT----EKWRFKTGK--RIESSPVIGNTDTIYFGSYD 274 (330)
T ss_dssp TSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTT--SC----EEEEEECSS--CCCSCCEECTTSCEEEECTT
T ss_pred CCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCC--CC----EeEEeeCCC--CccccceEcCCCeEEEecCC
Confidence 45677777776 5677887764 499999999999999542 21 122333332 333344554 6889999975
Q ss_pred -eEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccc
Q psy16020 82 -KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 82 -~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~ 136 (151)
.|+.+|+ +++....+.... ..+.++..+ +..+| .+..++.+++...+..+
T Consensus 275 ggl~~~d~-~g~~~~~~~~~~---~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 275 GHLYAINP-DGTEKWNFETGS---WIIATPVIDENGTIY-FGTRNGKFYALFNLEHH 326 (330)
T ss_dssp CEEEEECT-TSCEEEEEECSS---CCCSCCEECTTCCEE-EECTTSCEEEEEC----
T ss_pred CCEEEECC-CCcEEEEEEcCC---ccccceEEcCCCEEE-EEcCCCeEEEEeccccc
Confidence 8999997 788777776543 367777774 44556 47788888887776543
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.98 E-value=2.6e-05 Score=62.14 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=53.7
Q ss_pred Eeee--CCEEEEEeC------------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeC
Q psy16020 68 LAAV--YNKVWCGYK------------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNA 132 (151)
Q Consensus 68 m~~v--~~~Lw~g~~------------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~ 132 (151)
+++. ++++|+++. +.|.+||++|+++.+++..+. +..|+++++|- +++..+ +.|.+||+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-----p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-----ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-----CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-----eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 4444 478998763 489999999999999999873 78888886543 223334 99999999
Q ss_pred Ccc--ceeeeE
Q psy16020 133 HTY--QHLQDV 141 (151)
Q Consensus 133 ~t~--~~l~~i 141 (151)
.|+ +.++.|
T Consensus 333 ~t~~l~~~~~i 343 (361)
T 2oiz_A 333 SQPEPKLLRTI 343 (361)
T ss_dssp SSSSCEEEEEE
T ss_pred CCCcceeeEEe
Confidence 999 999887
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.98 E-value=0.001 Score=51.63 Aligned_cols=124 Identities=8% Similarity=0.046 Sum_probs=78.1
Q ss_pred eeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCC---CC-CCcc---eEEEeCCCCCceEEEeeeC--CEEEEEe--CCeE
Q psy16020 18 ALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQ---WD-LSKY---HTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKI 83 (151)
Q Consensus 18 V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~---wd-~~~~---~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I 83 (151)
+.++.+.+ +++|++. .++.|.+|+....+. .. +... ..+.+.. ....+.+++.. +.||+++ +++|
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-GSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-TCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC-CCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 35566654 3577665 478999998864331 00 1111 2333332 24457888863 4699988 4689
Q ss_pred EEEeCCCCcEE--EEEEecCCCCCceeEEEEeCCE--EEEEEcC-CCeEEEEeCC--c--cceeeeEe
Q psy16020 84 HVVDPKSLVVL--KSFDAHPRRESQVRQMTWAGDG--VWVSIRL-DSTLRMYNAH--T--YQHLQDVD 142 (151)
Q Consensus 84 ~vid~~t~~i~--~~~~~h~~~~~~I~~m~~~~~~--vwis~~~-d~~l~lwd~~--t--~~~l~~id 142 (151)
.+||.++++.. .++............+.++++| ++++.+. ++.|.+|+.. + .+.+..+.
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~ 303 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL 303 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec
Confidence 99999887653 3444443333457899998665 5667777 7999999985 3 34555554
No 166
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.97 E-value=0.0009 Score=51.60 Aligned_cols=117 Identities=11% Similarity=0.103 Sum_probs=75.7
Q ss_pred ceeeeEEeCC--eEEEE-ecCCcEEEEEcCC-CCCCCCCcceEEEeCCC----CCceEEEeeeC--CEEEEEe--CCeEE
Q psy16020 17 TALPPVHVQG--RVVCA-LADGSVAIFRRGP-DGQWDLSKYHTVTLGLP----HHSVRSLAAVY--NKVWCGY--KNKIH 84 (151)
Q Consensus 17 ~V~~i~~~~~--~v~vg-l~nG~l~v~~~~~-~~~wd~~~~~~i~l~~~----~~pV~~m~~v~--~~Lw~g~--~n~I~ 84 (151)
.+..+.+.++ ++|++ ..+|.+.+|+... .|.+ .....+..... ...++.+++.. +.||+++ ++.|.
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~ 265 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF--TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLA 265 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE--EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEE
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce--EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEE
Confidence 5666777643 58875 5678999998753 2321 11112221110 13467787763 4698876 36899
Q ss_pred EEeCC---CCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEE--eCCcccee
Q psy16020 85 VVDPK---SLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMY--NAHTYQHL 138 (151)
Q Consensus 85 vid~~---t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lw--d~~t~~~l 138 (151)
+||.+ +++....+..+. ..+..++++++| ++++...++.+.+| |..++++.
T Consensus 266 v~~~~~~g~~~~~~~~~~~~---~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 266 VFAVTADGHLTLIQQISTEG---DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEECGGGCEEEEEEEECSS---SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEECCCCcEEEeEEEecCC---CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 99987 445666666653 368889998665 57777778999999 77776665
No 167
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.94 E-value=0.0024 Score=49.49 Aligned_cols=124 Identities=16% Similarity=0.228 Sum_probs=75.8
Q ss_pred CceeeeEEeCCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEe-CCC-------CCceEEEeeeC--CEEEEEe--CCe
Q psy16020 16 DTALPPVHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTL-GLP-------HHSVRSLAAVY--NKVWCGY--KNK 82 (151)
Q Consensus 16 ~~V~~i~~~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~-------~~pV~~m~~v~--~~Lw~g~--~n~ 82 (151)
..+..+...++++|++. .+|.|.+|+...++... .....+.. +.. ...+.++.+.. +.|++++ .+.
T Consensus 100 ~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 100 ADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALL-PASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp SCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBC-SCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCc-ccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 45556666555688876 57899999987655321 11122222 110 12247777763 4688887 368
Q ss_pred EEEEeCC--CC----c-EE-----EEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccc--eeeeEe
Q psy16020 83 IHVVDPK--SL----V-VL-----KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ--HLQDVD 142 (151)
Q Consensus 83 I~vid~~--t~----~-i~-----~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~--~l~~id 142 (151)
|++|+.+ ++ + +. ..+... ....+.+++++++| ++++...++.|++||..+++ .++.+.
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~ 252 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVA--PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA 252 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECC--TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEcCCCCcccccceeecccccceecC--CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe
Confidence 8888755 33 2 22 223322 23468899999775 67777789999999988654 345443
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.94 E-value=0.0017 Score=48.70 Aligned_cols=128 Identities=9% Similarity=0.055 Sum_probs=84.3
Q ss_pred CceeeeeeCC--CceeeeEEe-CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe-
Q psy16020 6 PTPYPLNKIL--DTALPPVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY- 79 (151)
Q Consensus 6 ~~~l~~i~l~--~~V~~i~~~-~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~- 79 (151)
.+.++.+..+ ..+.+|... ++++|++. .++.|.+|+.. |. ....+........++.|++. ++++|++.
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~----~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GN----VLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SC----EEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CC----EEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 4455555443 367788775 45788885 46789998743 21 11222222212456788886 47899987
Q ss_pred -CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCC-eEEEEeCCccceeeeEe
Q psy16020 80 -KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDS-TLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 80 -~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~-~l~lwd~~t~~~l~~id 142 (151)
.+.|++||+ +++...++..+. ....+..|+.+++ .+|++...++ .|++||.. .+.+..+.
T Consensus 183 ~~~~i~~~~~-~g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~ 245 (286)
T 1q7f_A 183 RAHCVKVFNY-EGQYLRQIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALE 245 (286)
T ss_dssp GGTEEEEEET-TCCEEEEESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEE
T ss_pred CCCEEEEEcC-CCCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEc
Confidence 469999998 456666665432 1247889999865 4699998886 99999964 66666664
No 169
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.93 E-value=0.0003 Score=61.01 Aligned_cols=140 Identities=14% Similarity=0.078 Sum_probs=90.0
Q ss_pred CCceeeeeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeC--C-CCCceEEEeeeCCEEEE
Q psy16020 5 HPTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG--L-PHHSVRSLAAVYNKVWC 77 (151)
Q Consensus 5 ~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~--~-~~~pV~~m~~v~~~Lw~ 77 (151)
..+.+|+.++++. ...-...++.||++..+|.|..++...+. .|..+........ . +...-+..++.+++|++
T Consensus 47 ~l~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v 126 (689)
T 1yiq_A 47 QLGLAWSYKLDLDRGVEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYV 126 (689)
T ss_dssp GEEEEEEEECSSCSCCCCCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEE
T ss_pred CceEEEEEECCCCCCceecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEE
Confidence 3467898888742 23334578899999999999999975332 3644321100000 0 00011344667899999
Q ss_pred Ee-CCeEEEEeCCCCcEEEEEEec--CCCCCcee-EEEEeCCEEEEEEc-----CCCeEEEEeCCccceeeeEeCC
Q psy16020 78 GY-KNKIHVVDPKSLVVLKSFDAH--PRRESQVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 78 g~-~n~I~vid~~t~~i~~~~~~h--~~~~~~I~-~m~~~~~~vwis~~-----~d~~l~lwd~~t~~~l~~idi~ 144 (151)
++ +++|+.+|++|+++.-++... ......+. .-...++.|++..+ .++.|+.||++|++.+-.++..
T Consensus 127 ~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 202 (689)
T 1yiq_A 127 GVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTV 202 (689)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred EccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEeccc
Confidence 99 579999999999998887753 11111111 11234666666544 3789999999999999988753
No 170
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.92 E-value=0.00032 Score=56.66 Aligned_cols=92 Identities=13% Similarity=0.040 Sum_probs=64.5
Q ss_pred CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCcee
Q psy16020 35 GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVR 108 (151)
Q Consensus 35 G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~ 108 (151)
++|.+|+.. + .....+.-. ..+|.++.+.. +.|..++ + ..|++||+++++.. .+..|.. .+.
T Consensus 159 ~~i~i~d~~--g----~~~~~l~~~--~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~---~~~ 226 (415)
T 2hqs_A 159 YELRVSDYD--G----YNQFVVHRS--PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPR---HNG 226 (415)
T ss_dssp EEEEEEETT--S----CSCEEEEEE--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSS---CEE
T ss_pred ceEEEEcCC--C----CCCEEEeCC--CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCC---ccc
Confidence 689999864 2 223343333 38899999973 5666665 3 38999999999885 4666653 799
Q ss_pred EEEEeCCEE--EEEEcCC--CeEEEEeCCcccee
Q psy16020 109 QMTWAGDGV--WVSIRLD--STLRMYNAHTYQHL 138 (151)
Q Consensus 109 ~m~~~~~~v--wis~~~d--~~l~lwd~~t~~~l 138 (151)
++.++++|- .++.+.+ ..|++||..+.+..
T Consensus 227 ~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~ 260 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR 260 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred CEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE
Confidence 999997764 4455554 45999999987653
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.92 E-value=0.0019 Score=48.49 Aligned_cols=120 Identities=12% Similarity=0.102 Sum_probs=80.2
Q ss_pred ceeeeeeCC---CceeeeEEeC-CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCC--CCceEEEeee-CCEEEEE
Q psy16020 7 TPYPLNKIL---DTALPPVHVQ-GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLP--HHSVRSLAAV-YNKVWCG 78 (151)
Q Consensus 7 ~~l~~i~l~---~~V~~i~~~~-~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~--~~pV~~m~~v-~~~Lw~g 78 (151)
+.+..+..+ ..+..|...+ +++|++.. ++.|.+|+.. +. ....++.. ....+.|++- +++||++
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~------~~~~~~~~g~~~~p~~i~~d~~G~l~v~ 223 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQ------YLRQIGGEGITNYPIGVGINSNGEILIA 223 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT--CC------EEEEESCTTTSCSEEEEEECTTCCEEEE
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC--CC------EEEEEccCCccCCCcEEEECCCCCEEEE
Confidence 344455432 3577787764 68998864 7899999863 21 12233321 1345777775 4789998
Q ss_pred eC--C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccce
Q psy16020 79 YK--N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 79 ~~--n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~ 137 (151)
.. + +|++||+ +++..+++..+.. ...+..++.+++| +|++ +.++.|++|+.....+
T Consensus 224 ~~~~~~~i~~~~~-~g~~~~~~~~~~~-~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 224 DNHNNFNLTIFTQ-DGQLISALESKVK-HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp ECSSSCEEEEECT-TSCEEEEEEESSC-CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred eCCCCEEEEEECC-CCCEEEEEcccCC-CCcceeEEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 83 4 8999996 5777788887643 2357788888664 5777 5689999999876443
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.91 E-value=0.0013 Score=51.16 Aligned_cols=112 Identities=11% Similarity=0.113 Sum_probs=75.8
Q ss_pred eeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC---------CeEEE
Q psy16020 18 ALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK---------NKIHV 85 (151)
Q Consensus 18 V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~---------n~I~v 85 (151)
+..|...+ +++|++- .++.|.+|+... |. ....+........+..+.+..+.++...+ ++|++
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~----~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~ 272 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDT-KE----FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFV 272 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTT-CC----EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEE
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCC-Cc----EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEE
Confidence 67777764 6888886 467899998752 21 11222222222455555555444443332 48999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t 134 (151)
||..++++..++.........+..|+++++| +|++...+..|++|+...
T Consensus 273 ~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 273 MNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 9999999999986333334578999999775 799999999999999864
No 173
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.91 E-value=0.00029 Score=60.91 Aligned_cols=140 Identities=12% Similarity=0.045 Sum_probs=90.6
Q ss_pred CCceeeeeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeC--CCCCc-eEEEeeeCCEEEE
Q psy16020 5 HPTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG--LPHHS-VRSLAAVYNKVWC 77 (151)
Q Consensus 5 ~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~--~~~~p-V~~m~~v~~~Lw~ 77 (151)
..+.+|+.++++. -..-...++.||++..+|.|..++...+. .|..+.......+ ....+ -+..++.+++|++
T Consensus 43 ~l~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 122 (668)
T 1kv9_A 43 SLGLAWYMDLDNTRGLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYV 122 (668)
T ss_dssp GEEEEEEEECSCCSCCCCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEE
T ss_pred CcceEEEEECCCCCCcccCCEEECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEE
Confidence 4567888888742 23334578899999999999999975332 3644321110000 00011 1345567899999
Q ss_pred Ee-CCeEEEEeCCCCcEEEEEEecCCC-CCcee-EEEEeCCEEEEEEcC-----CCeEEEEeCCccceeeeEeCC
Q psy16020 78 GY-KNKIHVVDPKSLVVLKSFDAHPRR-ESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 78 g~-~n~I~vid~~t~~i~~~~~~h~~~-~~~I~-~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l~~idi~ 144 (151)
++ +++|+.+|++|+++.-++...... ...+. .-...++.|++..+. ++.|+.+|++|++.+..++..
T Consensus 123 ~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 197 (668)
T 1kv9_A 123 GTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV 197 (668)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred EcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEeccc
Confidence 99 579999999999998888753110 01111 112346677765543 689999999999999998763
No 174
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.87 E-value=0.00034 Score=57.22 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=60.7
Q ss_pred CCEEEEEe-----------CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE---EEEEEcCCCeEEEEeCCccce
Q psy16020 72 YNKVWCGY-----------KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG---VWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 72 ~~~Lw~g~-----------~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~---vwis~~~d~~l~lwd~~t~~~ 137 (151)
+++||++. ++.|.|+|++|+++++++..-. .+..|.++.++ ++++.+.++.|.++|+.|++.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 58899985 2689999999999999998753 67888998664 355567799999999999999
Q ss_pred eeeEeCCcccccc
Q psy16020 138 LQDVDIEPYVSKM 150 (151)
Q Consensus 138 l~~idi~~~v~~~ 150 (151)
+..|+.-..=+.|
T Consensus 367 ~~~i~~~~~p~~l 379 (386)
T 3sjl_D 367 LRSVNQLGHGPQV 379 (386)
T ss_dssp EEEECCCCSSCCE
T ss_pred EEEecCCCCCcee
Confidence 9999765543333
No 175
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.87 E-value=0.0006 Score=57.94 Aligned_cols=142 Identities=10% Similarity=-0.042 Sum_probs=89.7
Q ss_pred CCceeeeeeCCCc---eeeeEEeCCeEEEEec-CCcEEEEEc-CCCC-CCCCCcceEEEeC---CCCCceEEEeeeCCEE
Q psy16020 5 HPTPYPLNKILDT---ALPPVHVQGRVVCALA-DGSVAIFRR-GPDG-QWDLSKYHTVTLG---LPHHSVRSLAAVYNKV 75 (151)
Q Consensus 5 ~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~-nG~l~v~~~-~~~~-~wd~~~~~~i~l~---~~~~pV~~m~~v~~~L 75 (151)
..+.+|+.+++.. -..-...++.||++.. +|.|..++. ..+. .|..+........ .+...-+..++.+++|
T Consensus 39 ~l~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 118 (571)
T 2ad6_A 39 NVKAAWSFSTGVLNGHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQI 118 (571)
T ss_dssp GCEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEE
T ss_pred CccEEEEEECCCCCCcccccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEE
Confidence 3467888888631 1334457889999999 899999997 4322 3543221100000 0000012345678999
Q ss_pred EEEeC-CeEEEEeCCCCcEEEEEEecCC-CCCcee-EEEEeCCEEEEEEcC-----CCeEEEEeCCccceeeeEeCCcc
Q psy16020 76 WCGYK-NKIHVVDPKSLVVLKSFDAHPR-RESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 76 w~g~~-n~I~vid~~t~~i~~~~~~h~~-~~~~I~-~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
++++. ++++.+|++|+++.-++..... ....+. .-...++.|++.... ++.|+.+|++|++.+.+++..+.
T Consensus 119 ~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~ 197 (571)
T 2ad6_A 119 VKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGS 197 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCC
Confidence 99985 6899999999998877764310 000111 112346667766553 79999999999999999987653
No 176
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.76 E-value=0.00096 Score=53.59 Aligned_cols=111 Identities=10% Similarity=0.023 Sum_probs=76.9
Q ss_pred eCCeEEEEec--CC---cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020 24 VQGRVVCALA--DG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (151)
Q Consensus 24 ~~~~v~vgl~--nG---~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v 85 (151)
.++++|+.-. .+ +|.+|+... .+....++.|. .| .+.+. ++.||++. +|.|.+
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t-----~~~~~~i~~g~--~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGS-----GSILGHVNGGF--LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCC-----CeEEEEecCCC--CC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 3457888754 22 788988752 23345667775 67 66665 46799986 468999
Q ss_pred EeCCCCcEEEEEEec-C-CC--CCceeEEEEeCCE--EEEEEcC-CCeEEEEeCCccceeee-EeCC
Q psy16020 86 VDPKSLVVLKSFDAH-P-RR--ESQVRQMTWAGDG--VWVSIRL-DSTLRMYNAHTYQHLQD-VDIE 144 (151)
Q Consensus 86 id~~t~~i~~~~~~h-~-~~--~~~I~~m~~~~~~--vwis~~~-d~~l~lwd~~t~~~l~~-idi~ 144 (151)
||+.|+++..++..- . +. ......+.++++| +|++-.+ ++.|.++| .+.+.+++ |++.
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~ 167 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP 167 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC
Confidence 999999999988753 1 00 1234577777554 5655544 68899999 99999999 8763
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.75 E-value=0.0023 Score=48.93 Aligned_cols=110 Identities=9% Similarity=0.041 Sum_probs=74.9
Q ss_pred CCceeeeEEe-CCeEEEEecCC-----cEEEEEcCCCCCCCCCcce-EEEeCCCCCceEEEeee-CCEEEEEeC------
Q psy16020 15 LDTALPPVHV-QGRVVCALADG-----SVAIFRRGPDGQWDLSKYH-TVTLGLPHHSVRSLAAV-YNKVWCGYK------ 80 (151)
Q Consensus 15 ~~~V~~i~~~-~~~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~-~i~l~~~~~pV~~m~~v-~~~Lw~g~~------ 80 (151)
+..+.+|... ++++|++..++ .|.+|+... + ... .+.-..+...++.+.+. ++++|++..
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~-~-----~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-D-----NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 159 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-C-----SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC-C-----EEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence 4678888875 55788887554 788887542 1 111 11111122567888776 578999874
Q ss_pred --CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020 81 --NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 81 --n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t 134 (151)
+.|+.+|++++++....... ..++.+.++++ .+|++...++.|.+||..+
T Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTPIIQNI----SVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CCEEEEEECTTSCCEEEEEEEE----SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCceEEEEeCCCCEEEEeecCC----CcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 47999999887776544322 25788888866 4788888899999999864
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.75 E-value=0.00047 Score=56.31 Aligned_cols=113 Identities=12% Similarity=0.011 Sum_probs=79.7
Q ss_pred ceeeeEE--eCCeEEEEecCCcEEEEEcCCCC------CCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeC
Q psy16020 17 TALPPVH--VQGRVVCALADGSVAIFRRGPDG------QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDP 88 (151)
Q Consensus 17 ~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~------~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~ 88 (151)
++..|.. ..+.+|+|..+ .+.+|+..... .-+++....+++. . |+.|.+-++.|+++.++.|++||.
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp---~-V~~l~fd~~~L~v~~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIP---D-VIFVCFHGDQVLVSTRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECT---T-EEEEEEETTEEEEEESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCC---C-eeEEEECCCEEEEEcCCcEEEEEc
Confidence 4555544 45567777766 45558754100 0013322344542 4 999999557899998889999999
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l 138 (151)
.++....++..|+. .+..+...+.. .+.+..|+.|.+||..+.+..
T Consensus 114 ~sl~~~~~~~~~~~---~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 114 EELSEFRTVTSFEK---PVFQLKNVNNT-LVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp SSTTCEEEEEECSS---CEEEEEECSSE-EEEEETTSEEEEEETTTCCEE
T ss_pred hhhhccCccceeec---ceeeEEecCCC-EEEEECCCCEEEEEccCCccc
Confidence 99997778887853 68888887766 777899999999999977654
No 179
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.75 E-value=0.002 Score=55.78 Aligned_cols=137 Identities=13% Similarity=0.187 Sum_probs=90.7
Q ss_pred CCCCceeeeeeCC-C-----cee-eeEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCcceEEEeCCCC------
Q psy16020 3 YPHPTPYPLNKIL-D-----TAL-PPVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYHTVTLGLPH------ 62 (151)
Q Consensus 3 ~~~~~~l~~i~l~-~-----~V~-~i~~~~~~v~vgl~------nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~------ 62 (151)
..+.+.+|+.++. + .+. .....++.||++.. +|.|.+|+...+. .|.+ ....+.
T Consensus 145 ~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~------~~~~~~~~~~~~ 218 (677)
T 1kb0_A 145 AATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW------FSVPGDPSKPFE 218 (677)
T ss_dssp TTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE------ESSCCCTTSCCS
T ss_pred CCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe------ccCCCCcccccc
Confidence 3577889999886 3 222 23446889999986 6899999975432 3432 221100
Q ss_pred ------------------------CceEEEee--eCCEEEEEeCC--------------------eEEEEeCCCCcEEEE
Q psy16020 63 ------------------------HSVRSLAA--VYNKVWCGYKN--------------------KIHVVDPKSLVVLKS 96 (151)
Q Consensus 63 ------------------------~pV~~m~~--v~~~Lw~g~~n--------------------~I~vid~~t~~i~~~ 96 (151)
.....+++ .++.||++.++ .|+.+|++|+++.-.
T Consensus 219 ~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~ 298 (677)
T 1kb0_A 219 DESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWH 298 (677)
T ss_dssp SHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE
T ss_pred ccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEE
Confidence 11123344 35889999875 499999999999988
Q ss_pred EEecCC-------CCCc-eeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 97 FDAHPR-------RESQ-VRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 97 ~~~h~~-------~~~~-I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
++.... ...+ +..+...|. .+++...+++.|+++|.+|++++..+.+.+
T Consensus 299 ~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~ 357 (677)
T 1kb0_A 299 YQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVP 357 (677)
T ss_dssp EESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred EecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence 885321 0112 222222332 568899999999999999999999887654
No 180
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.74 E-value=0.0067 Score=45.06 Aligned_cols=121 Identities=12% Similarity=0.121 Sum_probs=84.1
Q ss_pred CceeeeeeCC---CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe
Q psy16020 6 PTPYPLNKIL---DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY 79 (151)
Q Consensus 6 ~~~l~~i~l~---~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~ 79 (151)
+..+.++.+| ..+.+|... ++++|++.. +|.|.+|+.. +. ...+.+......+.+|+.- ++.+|++.
T Consensus 7 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~--~~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 79 (300)
T 2qc5_A 7 NFYLEEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS--GR-----IKEFEVPTPDAKVMCLIVSSLGDIWFTE 79 (300)
T ss_dssp SEEEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SC-----EEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred eeeEEEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC--Cc-----eEEEECCCCCCcceeEEECCCCCEEEEe
Confidence 3456777776 377888775 468999984 6889999754 32 1234443322567777775 47899998
Q ss_pred C--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccce
Q psy16020 80 K--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 80 ~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
. +.|+.+|++ ++.. .+... .....+..|+..+ ..+|++...++.|..||.. .+.
T Consensus 80 ~~~~~v~~~d~~-g~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 80 NGANKIGKLSKK-GGFT-EYPLP-QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TTTTEEEEECTT-SCEE-EEECS-STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred cCCCeEEEECCC-CCeE-EecCC-CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 5 689999998 7763 44422 1235789999884 4579998888999999987 443
No 181
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.74 E-value=0.00099 Score=50.35 Aligned_cols=112 Identities=6% Similarity=0.020 Sum_probs=76.2
Q ss_pred eeeeEEe----CC--eEEEEe-cCCcEEEEEcCCCCCCCCCcceEE-EeCCCC-CceEEEeee-CCEEEEEe--CCeEEE
Q psy16020 18 ALPPVHV----QG--RVVCAL-ADGSVAIFRRGPDGQWDLSKYHTV-TLGLPH-HSVRSLAAV-YNKVWCGY--KNKIHV 85 (151)
Q Consensus 18 V~~i~~~----~~--~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~-~pV~~m~~v-~~~Lw~g~--~n~I~v 85 (151)
+..|... ++ .+|++. .++.|.+|+...+|.. .....+ .+.... .....|++- +++||++. ++.|++
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~--~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI--ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE--EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc--ccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 4455555 33 688885 5788999986422321 111122 233211 335667765 47899996 468999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t 134 (151)
||+++++....+..+. ..+.++.++++ .+|++...++.|..||..+
T Consensus 252 ~d~~~g~~~~~~~~~~---~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 252 FGPDGGQPKMRIRCPF---EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ECTTCBSCSEEEECSS---SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EcCCCCcEeEEEeCCC---CCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999888888887664 37889988754 3899999999999999875
No 182
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.73 E-value=0.001 Score=53.64 Aligned_cols=122 Identities=7% Similarity=-0.050 Sum_probs=77.5
Q ss_pred CCceeeeeeCCCceeeeEEeCC--eEE-EEecCCc--EEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020 5 HPTPYPLNKILDTALPPVHVQG--RVV-CALADGS--VAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC 77 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~~~--~v~-vgl~nG~--l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~ 77 (151)
+.++..-...+..+.++.+.++ +++ ++..+|. |.+|+... .+...+......+.++.+.. +.|+.
T Consensus 212 tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~--------~~~~~l~~~~~~~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 212 NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS--------GQIRQVTDGRSNNTEPTWFPDSQNLAF 283 (415)
T ss_dssp TCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--------CCEEECCCCSSCEEEEEECTTSSEEEE
T ss_pred CCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC--------CCEEeCcCCCCcccceEECCCCCEEEE
Confidence 3444433335567888888753 344 5555665 66665432 22334544447889998863 56887
Q ss_pred EeC-C---eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE--EEEEcC--CCeEEEEeCCcccee
Q psy16020 78 GYK-N---KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV--WVSIRL--DSTLRMYNAHTYQHL 138 (151)
Q Consensus 78 g~~-n---~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v--wis~~~--d~~l~lwd~~t~~~l 138 (151)
++. + +|+++|+.+++.. .+..|. ..+..+.++++|- ..+... +..|++||..+.+..
T Consensus 284 ~s~~~g~~~i~~~d~~~~~~~-~l~~~~---~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 284 TSDQAGRPQVYKVNINGGAPQ-RITWEG---SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EECTTSSCEEEEEETTSSCCE-ECCCSS---SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred EECCCCCcEEEEEECCCCCEE-EEecCC---CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 774 2 7999999998854 344443 3788899987764 333333 368999999987663
No 183
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.73 E-value=0.0015 Score=47.92 Aligned_cols=119 Identities=10% Similarity=0.022 Sum_probs=76.0
Q ss_pred CCceeeeeeCCCceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--
Q psy16020 5 HPTPYPLNKILDTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-- 79 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-- 79 (151)
+.+.......+..|.++.+.++ +.++...+|.|.+|+....+ .+..+.-+....++.++.+.. ..|++++
T Consensus 31 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 105 (297)
T 2ojh_A 31 TRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDP-----SPEKVDTGFATICNNDHGISPDGALYAISDKV 105 (297)
T ss_dssp TTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCC-----SCEECCCTTCCCBCSCCEECTTSSEEEEEECT
T ss_pred CCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCC-----CceEeccccccccccceEECCCCCEEEEEEeC
Confidence 3344444455678889988753 33444459999999875312 112222222236788888863 5677777
Q ss_pred ---CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC
Q psy16020 80 ---KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 80 ---~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~ 133 (151)
..+|+.+|.++++. +.+..+. .+..+.+++++ +.++...++.+++|+..
T Consensus 106 ~~~~~~l~~~~~~~~~~-~~~~~~~----~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 106 EFGKSAIYLLPSTGGTP-RLMTKNL----PSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp TTSSCEEEEEETTCCCC-EECCSSS----SEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CCCcceEEEEECCCCce-EEeecCC----CccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 25899999888774 4444332 48888888655 45578889999999853
No 184
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.72 E-value=8e-06 Score=65.48 Aligned_cols=129 Identities=16% Similarity=0.071 Sum_probs=63.3
Q ss_pred CCCCceeeeeeCCCceeee-EEeCCeEEEE-ecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020 3 YPHPTPYPLNKILDTALPP-VHVQGRVVCA-LADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V~~i-~~~~~~v~vg-l~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~ 79 (151)
..+.+.+|+.+. +.+.+. ...++.+|++ ..||.|.+|+...+ ..|..+....-.+.. .|+. ..++.|++|+
T Consensus 26 ~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~--sp~~---~~~~~v~~g~ 99 (369)
T 2hz6_A 26 KRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA--SPCR---SSDGILYMGK 99 (369)
T ss_dssp TTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT--CSCC--------CCCCE
T ss_pred CCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc--CceE---ecCCEEEEEe
Confidence 457889999988 555544 3345555554 78999999987432 334332110000111 3422 1467788887
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
. +.|+.||++|++.+.++..+.. +. +.- .++..++++.++.|+.||+++++.+..++.
T Consensus 100 ~dg~v~a~D~~tG~~~w~~~~~~~----~~-~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 100 KQDIWYVIDLLTGEKQQTLSSAFA----DS-LSP-STSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp EEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred CCCEEEEEECCCCcEEEEecCCCc----cc-ccc-cCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 5 6899999999999888876631 11 111 344455778899999999999998877753
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.70 E-value=0.0032 Score=46.86 Aligned_cols=118 Identities=14% Similarity=0.170 Sum_probs=80.9
Q ss_pred eeeeeCC---CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--
Q psy16020 9 YPLNKIL---DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-- 80 (151)
Q Consensus 9 l~~i~l~---~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~-- 80 (151)
+..+++| ..+.+|... ++++|++.. +|.|.+|+.. +. ...+.+......+.+|++- ++.+|++..
T Consensus 5 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~--~~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 77 (299)
T 2z2n_A 5 LQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD--GK-----ITEYPLPTPDAKVMCLTISSDGEVWFTENAA 77 (299)
T ss_dssp EEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT--CC-----EEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred EEEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC--CC-----eEEecCCcccCceeeEEECCCCCEEEeCCCC
Confidence 4556666 478888875 468999987 6789998764 32 2233333223567788874 578999974
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccce
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~ 137 (151)
+.|+.+|++ ++. +.+... .....+..|...++ .+|++...++.|..||. +.+.
T Consensus 78 ~~i~~~~~~-g~~-~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 78 NKIGRITKK-GII-KEYTLP-NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp TEEEEECTT-SCE-EEEECS-STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred CeEEEECCC-CcE-EEEeCC-CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence 589999987 554 334422 12357899999854 57999988999999998 4443
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.69 E-value=0.0048 Score=45.85 Aligned_cols=112 Identities=13% Similarity=0.178 Sum_probs=76.9
Q ss_pred CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCC
Q psy16020 16 DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t 90 (151)
..+.+|... ++.+|++.. +|.|..|+.. +. ...+.+......+.+|++. +++||++. ++.|+++|+ +
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK--GI-----IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT--SC-----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC--Cc-----EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C
Confidence 467788774 568999876 6788888753 32 2334443222556788776 47899987 468999999 7
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcccee
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l 138 (151)
++.... .. ......+..|+.+++ .+|++...++.|..||. +.+..
T Consensus 129 g~~~~~-~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 129 GKIREY-EL-PNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp CCEEEE-EC-SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred CCEEEe-cC-CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 766533 21 112347899999855 57999888899999998 65544
No 187
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.69 E-value=0.00096 Score=55.10 Aligned_cols=66 Identities=14% Similarity=0.248 Sum_probs=54.5
Q ss_pred CCEEEEEeC-----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEc-CCCeEEEEeCCccce
Q psy16020 72 YNKVWCGYK-----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQH 137 (151)
Q Consensus 72 ~~~Lw~g~~-----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~-~d~~l~lwd~~t~~~ 137 (151)
+++||++.. |.|.|||+.|+++.+++.... ....|.++.+| .|++.. .++.|.++|+.|++.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH----EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 588999862 579999999999999998753 57788888543 455555 699999999999999
Q ss_pred eeeE
Q psy16020 138 LQDV 141 (151)
Q Consensus 138 l~~i 141 (151)
++.|
T Consensus 406 v~tI 409 (426)
T 3c75_H 406 LRSV 409 (426)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9998
No 188
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.69 E-value=0.00026 Score=57.33 Aligned_cols=108 Identities=10% Similarity=-0.027 Sum_probs=77.6
Q ss_pred eCCeEEEEecCC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020 24 VQGRVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (151)
Q Consensus 24 ~~~~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v 85 (151)
...++||.-..+ +|.|++.. ..+....+++|. .| .+.+. +++||+++ +|.|.+
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~-----t~~v~~~i~vG~--~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAG-----CGVTLGHSLGAF--LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETT-----TTEEEEEEEECT--TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred CCCeEEEECCccCCccceEEEEECC-----CCeEEEEEeCCC--CC--ceEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 456899987654 78899865 224557789987 78 57775 46799997 478999
Q ss_pred EeCCCCcEEEEEEecCCC----CCceeEEEEeCCE--EEEEEcC-CCeEEE--EeCCccceeeeEeC
Q psy16020 86 VDPKSLVVLKSFDAHPRR----ESQVRQMTWAGDG--VWVSIRL-DSTLRM--YNAHTYQHLQDVDI 143 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~----~~~I~~m~~~~~~--vwis~~~-d~~l~l--wd~~t~~~l~~idi 143 (151)
||+.|+++.+++...... ......+.++++| ++++-.. +..+.+ +|+.+ +++|++
T Consensus 101 iD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v 164 (368)
T 1mda_H 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS 164 (368)
T ss_dssp ECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC
T ss_pred EECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC
Confidence 999999999999875111 1235677788665 4554433 577999 99988 667754
No 189
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.69 E-value=0.0067 Score=46.97 Aligned_cols=119 Identities=9% Similarity=0.040 Sum_probs=80.3
Q ss_pred ceeeeEEe--CCeEEEEec--CCcEEEEEcCCCCCCCCCcceEEE-eCCC-------CCceEEEeee-C-CEEEEEeC--
Q psy16020 17 TALPPVHV--QGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVT-LGLP-------HHSVRSLAAV-Y-NKVWCGYK-- 80 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~--nG~l~v~~~~~~~~wd~~~~~~i~-l~~~-------~~pV~~m~~v-~-~~Lw~g~~-- 80 (151)
.+..|... ++++|++-+ ++.|.+|+. +|. ....+. -+.. ....+.|++- + ++||++..
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~--~g~----~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSP--SGK----FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECT--TSC----EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcC--CCC----EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 57778887 478999984 889999974 232 111111 1110 0225778875 3 78999873
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEc-------CCCeEEEEeCCccceeeeEe
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIR-------LDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~-------~d~~l~lwd~~t~~~l~~id 142 (151)
++|.+||+++++..+++.... ....+..+.+.+..++.+-+ .+..+++||..+++.+..+.
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~ 285 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHAS-FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFK 285 (329)
T ss_dssp TEEEEEETTTCCEEEEECCTT-TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCcEEEEEeccc-cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEc
Confidence 589999999999999986543 23467788777733344433 34589999999999888873
No 190
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.67 E-value=0.0073 Score=44.88 Aligned_cols=118 Identities=10% Similarity=0.179 Sum_probs=79.4
Q ss_pred eeeeCC---CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CC
Q psy16020 10 PLNKIL---DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KN 81 (151)
Q Consensus 10 ~~i~l~---~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n 81 (151)
..+.++ ..+.+|... ++++|++.. +|.|..|+.. |.+ ..+.+......+.+|++- +++||++. ++
T Consensus 53 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~~-----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 125 (300)
T 2qc5_A 53 KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GGF-----TEYPLPQPDSGPYGITEGLNGDIWFTQLNGD 125 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-----EEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CCe-----EEecCCCCCCCCccceECCCCCEEEEccCCC
Confidence 334454 467777764 467999986 5788888754 321 234443222556788775 57899988 46
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcccee
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l 138 (151)
.|+.+|++ +++.. +... .....++.|...++ .+|++...++.|..||. +.+..
T Consensus 126 ~i~~~~~~-g~~~~-~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 126 RIGKLTAD-GTIYE-YDLP-NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp EEEEECTT-SCEEE-EECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred eEEEECCC-CCEEE-ccCC-CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 89999998 77653 3221 12357889988754 47999988999999998 45443
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.64 E-value=0.00097 Score=49.37 Aligned_cols=112 Identities=13% Similarity=0.014 Sum_probs=75.6
Q ss_pred ceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeC-CEEEEEe--CCeEEEEeCCC
Q psy16020 17 TALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVY-NKVWCGY--KNKIHVVDPKS 90 (151)
Q Consensus 17 ~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~-~~Lw~g~--~n~I~vid~~t 90 (151)
.+.+|... ++++|++.. +|.|.+|+..... ..... .......+|++-. +.||++. +++|++||+++
T Consensus 151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN--------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp SCCCEEECTTCCEEEEEGGGTEEEEECTTTCC--------EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred CceeEEEeCCCCEEEEECCCCEEEEEecCCCc--------eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 56677765 467999875 5789999764211 11111 1114456777754 5899998 46899999987
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceee
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
.........+ ...+..|+.+++ .+|++...++.|++|+....+++.
T Consensus 223 ~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~~ 269 (270)
T 1rwi_B 223 TTSTVLPFTG---LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHH 269 (270)
T ss_dssp SCCEECCCCS---CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSCC
T ss_pred CcceeeccCC---CCCceeEEECCCCCEEEEECCCCEEEEEcCCCccccC
Confidence 6554321111 246889998854 479999999999999998766543
No 192
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.63 E-value=0.00037 Score=59.38 Aligned_cols=116 Identities=15% Similarity=0.129 Sum_probs=79.1
Q ss_pred CceeeeEEeCC--eEEEEec-CC-----cEEEEEcCCCCCCCCCcceEEEeCCCC----------------------Cce
Q psy16020 16 DTALPPVHVQG--RVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPH----------------------HSV 65 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~-nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~----------------------~pV 65 (151)
.+|.++.+.++ +++.+.. +| +|.+|+... |. ....+...... ..|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-GQ----TRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-CC----EEEEECGGGTC--------------------CCEES
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-Cc----eeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 46778888643 5666665 77 788887642 21 11111111100 237
Q ss_pred EEEeee--CCEEEEEeCCeEEEEeCCCC---cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeee
Q psy16020 66 RSLAAV--YNKVWCGYKNKIHVVDPKSL---VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 66 ~~m~~v--~~~Lw~g~~n~I~vid~~t~---~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~ 140 (151)
.++.+. ++.|..++.+.|++||..++ ++ +.+..|. ..+..+.++++|-++....+..|++||..+.+..+.
T Consensus 112 ~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~-~~l~~~~---~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAV-RQLTHGE---GFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQL 187 (741)
T ss_dssp CCCEECTTSSEEEEEETTEEEEEESSSCSTTSC-CBCCCSS---SCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEEC
T ss_pred ceeEECCCCCEEEEEeCCcEEEEECCCCCcceE-EEcccCC---cccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEe
Confidence 777776 35688888899999999998 54 3455554 379999999998877777788999999998766543
No 193
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.62 E-value=0.0009 Score=54.15 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=59.2
Q ss_pred eCCEEEEEeC----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEc-CCCeEEEEeCCccce
Q psy16020 71 VYNKVWCGYK----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQH 137 (151)
Q Consensus 71 v~~~Lw~g~~----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~-~d~~l~lwd~~t~~~ 137 (151)
-++++|++.. +.+.|||+.|+++.+++.... ....|.++++| +|++.. .++.|.++|+.|++.
T Consensus 274 dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 274 NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence 3588998742 367799999999999998774 68888888654 799999 799999999999999
Q ss_pred eeeEeCCc
Q psy16020 138 LQDVDIEP 145 (151)
Q Consensus 138 l~~idi~~ 145 (151)
++.|.+-.
T Consensus 350 v~~I~vg~ 357 (368)
T 1mda_H 350 QSSVELDK 357 (368)
T ss_dssp EEECCCCS
T ss_pred EEEEECCC
Confidence 99997543
No 194
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.61 E-value=0.0022 Score=54.60 Aligned_cols=134 Identities=13% Similarity=0.038 Sum_probs=85.9
Q ss_pred CCCceeeeeeCCCce-----eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCC-------ceEEEee
Q psy16020 4 PHPTPYPLNKILDTA-----LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHH-------SVRSLAA 70 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V-----~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~-------pV~~m~~ 70 (151)
...+.+|+.++++.+ ..-...++.||++..++.|..++...+. .|.. ++..+.. .-+.+++
T Consensus 42 ~~~~~~W~~~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~------~~~~~~~~~~~~~~~~~g~a~ 115 (582)
T 1flg_A 42 FKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTY------NHRLPDDIRPCCDVVNRGAAI 115 (582)
T ss_dssp GGCEEEEEEECCTTCCSCCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEE------ECCCCTTCCCSSCSCCCCCEE
T ss_pred CCCcEEEEEECCCccCCcceeccEEECCEEEEEcCCCCEEEEECCCCcEEEEE------cCCCCcccccccccCCCccEE
Confidence 456788999988532 2334578899999986668888875322 3533 3322110 0144556
Q ss_pred eCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCC-CCcee-EEEEeCC------EEEEEEc-----CCCeEEEEeCCccc
Q psy16020 71 VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRR-ESQVR-QMTWAGD------GVWVSIR-----LDSTLRMYNAHTYQ 136 (151)
Q Consensus 71 v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~-~~~I~-~m~~~~~------~vwis~~-----~d~~l~lwd~~t~~ 136 (151)
.+++|++++. ++|+.+|++|+++.=++...... ...+. .-...++ .|++..+ .++.|+.+|++|++
T Consensus 116 ~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 116 YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 7899999984 69999999999998777654210 00111 1111233 4554332 47899999999999
Q ss_pred eeeeEeC
Q psy16020 137 HLQDVDI 143 (151)
Q Consensus 137 ~l~~idi 143 (151)
.+-....
T Consensus 196 ~~W~~~~ 202 (582)
T 1flg_A 196 EIWMRPF 202 (582)
T ss_dssp EEEEEES
T ss_pred EEeecCC
Confidence 9987654
No 195
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.60 E-value=0.0017 Score=56.13 Aligned_cols=110 Identities=14% Similarity=0.137 Sum_probs=73.8
Q ss_pred CC-CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCC-CCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCC
Q psy16020 14 IL-DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWD-LSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPK 89 (151)
Q Consensus 14 l~-~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd-~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~ 89 (151)
|+ ..|.||.-. ++++|+|+.+| |..|+-. .+. ...+. .+ +...|+++..- ++.||+|..+-++.+|..
T Consensus 19 l~~n~V~~I~qD~~G~lWigT~~G-L~ryDG~---~~~~~~~~~--~~--~~~~i~~i~~d~~g~lWigT~~Gl~~yd~~ 90 (758)
T 3ott_A 19 AEASVVSCFLQDSEGLIWIGSNKG-LFSYDGY---STQQHFTYG--EN--NNTRIYCGVIIDNTYLYMGTDNGILVYNYR 90 (758)
T ss_dssp SSCCCEEEEEECTTSCEEEEESSC-EEEECSS---CEEECSCTT--ST--TSSCEEEEEEETTTEEEEEETTEEEEEETT
T ss_pred cccceEEEEEECCCCCEEEEECCC-ccccCCC---ceEEEEccC--CC--CCceEEEEEEcCCCcEEEEeCCCeEEEeCC
Confidence 55 589999864 66899999887 6667521 110 00000 11 23679998775 588999999899999999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccc
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~ 136 (151)
+.+.... .......|.++......+|+...+ -|..||..+.+
T Consensus 91 ~~~f~~~---~~~~~~~i~~i~~~~g~lWigt~~--Gl~~~~~~~~~ 132 (758)
T 3ott_A 91 ADRYEQP---ETDFPTDVRTMALQGDTLWLGALN--GLYTYQLQSRK 132 (758)
T ss_dssp TTEECCC---SCCCCSCEEEEEEETTEEEEEETT--EEEEEETTTCC
T ss_pred CCEEECc---ccCCCceEEEEEecCCcEEEEcCC--cceeEeCCCCe
Confidence 8765431 111223588887777789998765 57889987643
No 196
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.59 E-value=2.7e-05 Score=62.33 Aligned_cols=128 Identities=10% Similarity=-0.062 Sum_probs=69.5
Q ss_pred CCceeeeeeCC--Ccee-e-eEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020 5 HPTPYPLNKIL--DTAL-P-PVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (151)
Q Consensus 5 ~~~~l~~i~l~--~~V~-~-i~~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~ 79 (151)
+.+.+|..+.+ +.+. + ....++.||+|..+|.|.+|+...+ ..|.++.... ++ +...++.|++|+
T Consensus 68 tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---------~~-~~p~~~~v~~~~ 137 (369)
T 2hz6_A 68 NNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---------DS-LSPSTSLLYLGR 137 (369)
T ss_dssp --CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------------EEEEE
T ss_pred CCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---------cc-ccccCCEEEEEe
Confidence 45666666543 1111 1 1125678999999999999987533 2465543221 11 111567899888
Q ss_pred C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC----EEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020 80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD----GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 147 (151)
Q Consensus 80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~----~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v 147 (151)
. +.|+.||++|++..-+++.+.. ......++ +..+.++.++.|+.||.++++.+.+.++..++
T Consensus 138 ~dg~v~a~d~~tG~~~W~~~~~~~-----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv 205 (369)
T 2hz6_A 138 TEYTITMYDTKTRELRWNATYFDY-----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPV 205 (369)
T ss_dssp EEEEEECCCSSSSSCCCEEEEEEE-----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCE
T ss_pred cCCEEEEEECCCCCEEEeEecccc-----cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCce
Confidence 5 6899999999998766654321 11222231 33445678899999999999999988766544
No 197
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.57 E-value=0.017 Score=45.09 Aligned_cols=116 Identities=15% Similarity=0.087 Sum_probs=81.2
Q ss_pred CceeeeEEe-CCeEEEEec---CC--cEEEEEcCCCCCCCCCcceEEEeC-------CCCCceEEEeee-CCEEEEEe--
Q psy16020 16 DTALPPVHV-QGRVVCALA---DG--SVAIFRRGPDGQWDLSKYHTVTLG-------LPHHSVRSLAAV-YNKVWCGY-- 79 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~---nG--~l~v~~~~~~~~wd~~~~~~i~l~-------~~~~pV~~m~~v-~~~Lw~g~-- 79 (151)
..+..+... ++++|++.. +| +|..++ +|. ..+.. ..-..+..|.+- +++||+..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~---~g~-------~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT---QDG-------LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE---TTE-------EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECH
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC---CCC-------eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCC
Confidence 677888876 678999963 35 666665 221 11111 112567788876 48899875
Q ss_pred -----CCeEEEEeCCCCcEEEEEEecCC---CCCceeEEEEe--CCEEEEEEc---CCCeEEEEeCCccceeeeE
Q psy16020 80 -----KNKIHVVDPKSLVVLKSFDAHPR---RESQVRQMTWA--GDGVWVSIR---LDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 80 -----~n~I~vid~~t~~i~~~~~~h~~---~~~~I~~m~~~--~~~vwis~~---~d~~l~lwd~~t~~~l~~i 141 (151)
+++|++||++|+++.+++..... ....++.++++ +..+|++-. .++.|.+||..+.+....+
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 36999999999999998875421 12457899998 346788887 7899999999887765544
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.54 E-value=0.002 Score=47.60 Aligned_cols=111 Identities=14% Similarity=0.013 Sum_probs=74.4
Q ss_pred CceeeeEEe-CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCCC
Q psy16020 16 DTALPPVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t 90 (151)
..+..|... ++++|++. .+|.|.+|+.... . ............++|++. +++||++.. +.|++||.++
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~------~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK------T-QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCC------S-CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCc------e-eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 467777775 56799985 4688999853211 1 111111111355677776 467999874 6899999988
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~ 136 (151)
.........+ ...+..|+.+++ .+|++...++.|..||..+..
T Consensus 181 ~~~~~~~~~~---~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 181 NNQVVLPFTD---ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CCEEECCCSS---CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CceEeecccC---CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 7754432222 247889999866 679999999999999987643
No 199
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.53 E-value=0.0097 Score=50.46 Aligned_cols=142 Identities=15% Similarity=0.133 Sum_probs=88.5
Q ss_pred CCCCceeeeeeCCC-----cee-eeEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCcceEE-Ee----------
Q psy16020 3 YPHPTPYPLNKILD-----TAL-PPVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYHTV-TL---------- 58 (151)
Q Consensus 3 ~~~~~~l~~i~l~~-----~V~-~i~~~~~~v~vgl~------nG~l~v~~~~~~~-~wd~~~~~~i-~l---------- 58 (151)
..+.+.+|+.++++ .+. .....++.||++.. +|.|.+|+...+. .|.++..... ..
T Consensus 132 ~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~ 211 (571)
T 2ad6_A 132 AKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSAN 211 (571)
T ss_dssp TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccc
Confidence 35778899998875 333 22345789999987 7999999975432 3533211000 00
Q ss_pred --------------------CCCCCceEEEee--eCCEEEEEeCC-----------------eEEEEeCCCCcEEEEEEe
Q psy16020 59 --------------------GLPHHSVRSLAA--VYNKVWCGYKN-----------------KIHVVDPKSLVVLKSFDA 99 (151)
Q Consensus 59 --------------------~~~~~pV~~m~~--v~~~Lw~g~~n-----------------~I~vid~~t~~i~~~~~~ 99 (151)
+. ..+-..+++ ..+.||++.+| .|+.+|++|+++.-+++.
T Consensus 212 ~~~G~~~~g~~~w~~~~~~~gg-~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~ 290 (571)
T 2ad6_A 212 PHYGQFGLGTKTWEGDAWKIGG-GTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQK 290 (571)
T ss_dssp GGGCCSSHHHHTSSTTGGGGCC-CCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEES
T ss_pred ccccccccccccCcccceecCC-CCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecC
Confidence 00 000012333 24789998853 599999999999888875
Q ss_pred cC-C-----C-CCcee-EEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 100 HP-R-----R-ESQVR-QMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 100 h~-~-----~-~~~I~-~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
.. + . ..++. .....|. .+++...+++.+.++|.+|++.+..+.+.+
T Consensus 291 ~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~ 346 (571)
T 2ad6_A 291 TPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDP 346 (571)
T ss_dssp STTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred CCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccC
Confidence 32 1 0 12221 1111222 357788999999999999999999887654
No 200
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.53 E-value=0.00038 Score=60.64 Aligned_cols=111 Identities=15% Similarity=0.200 Sum_probs=73.7
Q ss_pred CC-CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe--C----CCCCceEEEeee-CCEEEEEeCCeEE
Q psy16020 14 IL-DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL--G----LPHHSVRSLAAV-YNKVWCGYKNKIH 84 (151)
Q Consensus 14 l~-~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l--~----~~~~pV~~m~~v-~~~Lw~g~~n~I~ 84 (151)
|+ ..|.+|.-. ++++|+|+.+| |..|+-. .| +.++. . -+...|++|..- ++.||+|+.+-++
T Consensus 40 Ls~n~v~~I~qD~~G~lWigT~~G-L~ryDG~---~f-----~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWigT~~Gl~ 110 (795)
T 4a2l_A 40 LSQSTVFSIDQDKRGNMWFATYDG-VNKYDGY---AF-----TVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDGLS 110 (795)
T ss_dssp CSSSCEEEEEECTTSCEEEEETTE-EEEECSS---CE-----EEECCCTTCTTSCSCSCEEEEEECTTSCEEEEESSCEE
T ss_pred CccceeEEEEEcCCCCEEEeecCc-CcccCCC---ce-----EEEeCCCCCCCcccccceeEEEECCCCCEEEEeCCchh
Confidence 55 489999874 66899999877 6777522 11 22221 0 123679998875 4789999998899
Q ss_pred EEeCCCCcEEEEEEecCCC-CCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020 85 VVDPKSLVVLKSFDAHPRR-ESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~~-~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~ 136 (151)
.+|.++.+... +...... ...|.++....+ .+|++.. .-|..||..+.+
T Consensus 111 ~yd~~~~~f~~-~~~~~~~~~~~i~~i~~d~~g~lwi~t~--~gl~~~~~~~~~ 161 (795)
T 4a2l_A 111 RYDEEKDIFQN-FFYEKNGKHLQVNGIEEISPEQLLISTP--EGLIMFDIKESK 161 (795)
T ss_dssp EEETTTTEEEE-ECCEETTEECCCCEEEEEETTEEEEEET--TEEEEEETTTTE
T ss_pred eeCCCCCeEEe-ccccccCCCceEEEEEECCCCCEEEEEC--CceEEEECCCCE
Confidence 99999877543 3322111 112888877744 5798876 458899987643
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.52 E-value=0.00095 Score=51.28 Aligned_cols=127 Identities=10% Similarity=0.074 Sum_probs=81.4
Q ss_pred CCceeeeeeCCC--ceeeeEEe-CCeEEEE-ec-CCcEEEEEcCCCCCCCCCcceEEEeCC----CCCceEEEeee--CC
Q psy16020 5 HPTPYPLNKILD--TALPPVHV-QGRVVCA-LA-DGSVAIFRRGPDGQWDLSKYHTVTLGL----PHHSVRSLAAV--YN 73 (151)
Q Consensus 5 ~~~~l~~i~l~~--~V~~i~~~-~~~v~vg-l~-nG~l~v~~~~~~~~wd~~~~~~i~l~~----~~~pV~~m~~v--~~ 73 (151)
..+.+|+++.+. .+.+.... +++++++ .. ++.+..|+. +|. ....+.+.. +..+.+.+... ++
T Consensus 64 ~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~--~Gk----~l~~~~~~~~~~~~~~~~~~v~~~~~G~ 137 (276)
T 3no2_A 64 DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM--KGE----VLSKTEFETGIERPHAQFRQINKNKKGN 137 (276)
T ss_dssp TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT--TSC----EEEEEEECCSCSSGGGSCSCCEECTTSC
T ss_pred CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC--CCC----EEEEEeccCCCCcccccccCceECCCCC
Confidence 578899999873 55555543 3455555 44 567776654 342 222334321 11233333333 34
Q ss_pred EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 74 KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 74 ~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.|++..+ ++|++||++ ++.+.++.... .+....... ..++++...++.|..+|..|++.+.++.
T Consensus 138 ~lv~~~~~~~v~~~d~~-G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 138 YLVPLFATSEVREIAPN-GQLLNSVKLSG----TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEEECSS----CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEEEecCCCEEEEECCC-CCEEEEEECCC----CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 4555554 689999998 99999998653 334444454 4568888888899999999999999985
No 202
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.48 E-value=0.011 Score=50.61 Aligned_cols=143 Identities=11% Similarity=0.046 Sum_probs=90.3
Q ss_pred CCCCceeeeeeCCC-----ceee-eEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCcceEE-E--eCC---CCC
Q psy16020 3 YPHPTPYPLNKILD-----TALP-PVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYHTV-T--LGL---PHH 63 (151)
Q Consensus 3 ~~~~~~l~~i~l~~-----~V~~-i~~~~~~v~vgl~------nG~l~v~~~~~~~-~wd~~~~~~i-~--l~~---~~~ 63 (151)
..+.+.+|+.++++ .+.+ -...++.||++.+ +|.|..|+...+. .|.++..... . ++. ...
T Consensus 138 a~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 138 AETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 35778899998875 3332 2346789999985 7999999976432 3533211000 0 000 000
Q ss_pred ce------------------------EEEee--eCCEEEEEeCC-----------------eEEEEeCCCCcEEEEEEec
Q psy16020 64 SV------------------------RSLAA--VYNKVWCGYKN-----------------KIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 64 pV------------------------~~m~~--v~~~Lw~g~~n-----------------~I~vid~~t~~i~~~~~~h 100 (151)
|+ ..+++ ..+.||++.+| .|+.+|++|+++.=.++..
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 11 12333 35889999875 7999999999998888754
Q ss_pred CCC------CCceeEEEE---eCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 101 PRR------ESQVRQMTW---AGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 101 ~~~------~~~I~~m~~---~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
... ..+...... .|. .+.+...+++.+.++|.+|++++....+.+
T Consensus 298 ~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~ 353 (599)
T 1w6s_A 298 PHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDD 353 (599)
T ss_dssp TTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred CCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccC
Confidence 311 111111221 132 467789999999999999999999887654
No 203
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.46 E-value=0.0025 Score=48.83 Aligned_cols=109 Identities=17% Similarity=0.111 Sum_probs=74.6
Q ss_pred CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCC
Q psy16020 26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRE 104 (151)
Q Consensus 26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~ 104 (151)
+.++++..||.|.+|+... | +....++.+.. ..++++.+. +++++++.++.|+.||+ +++++.++..+..
T Consensus 6 ~~lv~~~~~~~v~~~d~~t-G----~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~-- 76 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDT-K----EIVWEYPLEKG-WECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAG-- 76 (276)
T ss_dssp EEEEECTTCSEEEEEETTT-T----EEEEEEECCTT-CCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTT--
T ss_pred cEEEeeCCCCEEEEEECCC-C----eEEEEeCCCcc-CCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCC--
Confidence 4577777899999998742 3 12223333321 245666664 57788866789999999 8999999997532
Q ss_pred CceeEEEEeCCE-EEEEEcC-CCeEEEEeCCccceeeeEeCC
Q psy16020 105 SQVRQMTWAGDG-VWVSIRL-DSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 105 ~~I~~m~~~~~~-vwis~~~-d~~l~lwd~~t~~~l~~idi~ 144 (151)
..+.......+| ++++.+. ...+..+|. +++.+.++.+.
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~ 117 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFE 117 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEEC
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEecc
Confidence 356666666554 4666666 778888886 68888888754
No 204
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.45 E-value=0.013 Score=45.76 Aligned_cols=100 Identities=15% Similarity=0.091 Sum_probs=65.0
Q ss_pred cCCcEEEEEcCCCCCCCCCcceEEEeC--CCCCceEEEeeeC--CEEEEEe--CCeEEEEeCC-CCcEEE--EEEecCCC
Q psy16020 33 ADGSVAIFRRGPDGQWDLSKYHTVTLG--LPHHSVRSLAAVY--NKVWCGY--KNKIHVVDPK-SLVVLK--SFDAHPRR 103 (151)
Q Consensus 33 ~nG~l~v~~~~~~~~wd~~~~~~i~l~--~~~~pV~~m~~v~--~~Lw~g~--~n~I~vid~~-t~~i~~--~~~~h~~~ 103 (151)
.+|++.+|+...+|. ....+... .....+.++.+.. +.|+++. .++|++||.+ +++... .+.... .
T Consensus 117 ~~g~v~v~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-~ 191 (365)
T 1jof_A 117 FAGYGNVFSVSETGK----LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD-P 191 (365)
T ss_dssp SCCEEEEEEECTTCC----EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS-T
T ss_pred CCceEEEEccCCCCc----CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC-C
Confidence 578999999875553 11223321 1125678888863 4688876 3689999998 787643 333111 1
Q ss_pred CCceeEEEEeCCE--EEEEEcCCCeEEEEeCC--ccce
Q psy16020 104 ESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH--TYQH 137 (151)
Q Consensus 104 ~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~--t~~~ 137 (151)
...+.+++++++| ++++...++.+.+|+.. +++.
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 2468999999776 56666778999998754 5554
No 205
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.45 E-value=0.0028 Score=54.36 Aligned_cols=142 Identities=11% Similarity=0.020 Sum_probs=88.3
Q ss_pred CCceeeeeeCCCc---eeeeEEeCCeEEEEec-CCcEEEEEc-CCCC-CCCCCcceEEEeC---CCCCceEEEee--eCC
Q psy16020 5 HPTPYPLNKILDT---ALPPVHVQGRVVCALA-DGSVAIFRR-GPDG-QWDLSKYHTVTLG---LPHHSVRSLAA--VYN 73 (151)
Q Consensus 5 ~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~-nG~l~v~~~-~~~~-~wd~~~~~~i~l~---~~~~pV~~m~~--v~~ 73 (151)
..+..|+.++++. -..-...++.||++.. +|.|..++. ..+. .|..+........ .+....+.+++ .++
T Consensus 39 ~l~~~W~~~~g~~~g~~~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g 118 (599)
T 1w6s_A 39 QLRPAWTFSTGLLNGHEGAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDG 118 (599)
T ss_dssp GEEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCS
T ss_pred CCcEEEEEECCCCCCceeccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCC
Confidence 4567888888631 1333456889999999 899999997 4322 3644321110000 00011233455 566
Q ss_pred E----EEEEeC-CeEEEEeCCCCcEEEEEEecCC-CCCcee-EEEEeCCEEEEEEc-----CCCeEEEEeCCccceeeeE
Q psy16020 74 K----VWCGYK-NKIHVVDPKSLVVLKSFDAHPR-RESQVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 74 ~----Lw~g~~-n~I~vid~~t~~i~~~~~~h~~-~~~~I~-~m~~~~~~vwis~~-----~d~~l~lwd~~t~~~l~~i 141 (151)
+ |++++. ++++.+|++|+++.=++..... ....+. .-.+.++.|++..+ .++.|+.+|++|++.+-.+
T Consensus 119 ~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 119 KTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp SSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred cceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 6 999985 6999999999998876654320 000111 11223566665544 4899999999999999999
Q ss_pred eCCcc
Q psy16020 142 DIEPY 146 (151)
Q Consensus 142 di~~~ 146 (151)
+..+.
T Consensus 199 ~~~~~ 203 (599)
T 1w6s_A 199 YATGP 203 (599)
T ss_dssp ESSSC
T ss_pred cCCCC
Confidence 87654
No 206
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.45 E-value=0.0013 Score=54.98 Aligned_cols=136 Identities=10% Similarity=0.131 Sum_probs=81.4
Q ss_pred CceeeeeeCCCceeeeEE--------------e----CCeEEE-EecCCcEEEEEcCCCCCCCCCcceEEE-------eC
Q psy16020 6 PTPYPLNKILDTALPPVH--------------V----QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTVT-------LG 59 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~--------------~----~~~v~v-gl~nG~l~v~~~~~~~~wd~~~~~~i~-------l~ 59 (151)
.+.++.+.+|..-..+.| . .+++|+ |+.++.|.||+...+.. ..+..+.++ .|
T Consensus 58 ~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~-~p~~~k~ie~~~~~~~~g 136 (462)
T 2ece_A 58 SKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPR-EPKIIKVIEPEEVKKVSG 136 (462)
T ss_dssp TSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTT-SCEEEEEECHHHHHHHHC
T ss_pred ceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCC-CceeeeeechhhcccccC
Confidence 467788888764433332 2 456777 66667899999764332 112223331 12
Q ss_pred CCCCceEEEeeeCCEEEEEe-C-------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEE---------
Q psy16020 60 LPHHSVRSLAAVYNKVWCGY-K-------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSI--------- 121 (151)
Q Consensus 60 ~~~~pV~~m~~v~~~Lw~g~-~-------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~--------- 121 (151)
. ..|=+-...-++ +++++ | +.|.++|++|++++.+++.-......-..+-+.++ .+.++.
T Consensus 137 ~-s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 137 Y-SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp E-EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred C-CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccc
Confidence 1 133222222344 88766 2 47999999999999999854322112222333422 233333
Q ss_pred ----------cCCCeEEEEeCCccceeeeEeCC
Q psy16020 122 ----------RLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 122 ----------~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
..+..|.+||..+.+.+++|++.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 34899999999999999999985
No 207
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.44 E-value=0.0036 Score=45.91 Aligned_cols=118 Identities=9% Similarity=-0.036 Sum_probs=72.6
Q ss_pred eeeCCCceeeeEEeCC--eEE-EEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CC--
Q psy16020 11 LNKILDTALPPVHVQG--RVV-CALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KN-- 81 (151)
Q Consensus 11 ~i~l~~~V~~i~~~~~--~v~-vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n-- 81 (151)
.+.....+.++.+.++ +++ ++..+|.+.+|..+.. ......+.....+++++.+.. +.|++++ ++
T Consensus 124 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 197 (297)
T 2ojh_A 124 LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID------SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM 197 (297)
T ss_dssp ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT------TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred EeecCCCccceEECCCCCEEEEEECCCCceEEEEEECC------CCcceEcccCCCccccceECCCCCEEEEEecCCCCc
Confidence 3333445777777643 344 7778899888886422 122334544447889998863 4577665 33
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCC-----------CeEEEEeCCcccee
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLD-----------STLRMYNAHTYQHL 138 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d-----------~~l~lwd~~t~~~l 138 (151)
+|+.++..+.+ .+.+..|. ..+..+.+++++- +++.+.+ ..|++||..+.+..
T Consensus 198 ~i~~~~~~~~~-~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 198 QIWRVRVDGSS-VERITDSA---YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp EEEEEETTSSC-EEECCCCS---EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred cEEEECCCCCC-cEEEecCC---cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 45556555544 45566554 4788889887653 2233332 67999999987653
No 208
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.42 E-value=0.0017 Score=56.45 Aligned_cols=113 Identities=17% Similarity=0.304 Sum_probs=76.9
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe-CCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCc
Q psy16020 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLV 92 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~ 92 (151)
..|.+|... ++.+|+|..+|-|..|+... +.+ ..+.. +.+...|+++..- +++||+|..+-|+.+|+++++
T Consensus 407 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~~~-----~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWFGTYLGNISYYNTRL-KKF-----QIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKK 480 (781)
T ss_dssp SBEEEEEECTTSCEEEEETTEEEEEECSSS-CEE-----EECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSS
T ss_pred cceEEEEECCCCCEEEEeccCCEEEEcCCC-CcE-----EEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCe
Confidence 578898875 67899999777788886532 111 11111 1123789998876 589999999889999999887
Q ss_pred EEEEEEec--CCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcc
Q psy16020 93 VLKSFDAH--PRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTY 135 (151)
Q Consensus 93 i~~~~~~h--~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~ 135 (151)
...-.... ......|.+|..+.+ .+|++....+ |..||..+.
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~ 525 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ 525 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC
T ss_pred EEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC
Confidence 65433222 011347899988755 4698887666 566887754
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.39 E-value=0.004 Score=47.54 Aligned_cols=101 Identities=16% Similarity=0.178 Sum_probs=68.6
Q ss_pred eeeEEe--CCeEEEEec-CCcEEEEEcC-CCCCCCCCcceEE-EeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCC
Q psy16020 19 LPPVHV--QGRVVCALA-DGSVAIFRRG-PDGQWDLSKYHTV-TLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKS 90 (151)
Q Consensus 19 ~~i~~~--~~~v~vgl~-nG~l~v~~~~-~~~~wd~~~~~~i-~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t 90 (151)
..|.+. ++.+|++-. ++.|.+|+.+ ++|. +...+.+ .+.........|++- +++||++. +++|++||++|
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~--~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQ--ISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCC--EEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCc--ccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 345554 335777654 6889999875 4453 2222222 333212345777774 57899998 46899999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeC---CEEEEEEcCC
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAG---DGVWVSIRLD 124 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~---~~vwis~~~d 124 (151)
+++...+..+. ..++++++.| ..+|++..++
T Consensus 230 G~~~~~i~~p~---~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 230 GKRLQTVKLPV---DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CCEEEEEECSS---SBEEEEEEESGGGCEEEEEEBCT
T ss_pred ceEEEEEECCC---CCceEEEEeCCCCCEEEEEcCCc
Confidence 99999998774 3799999984 3679888765
No 210
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.34 E-value=0.0095 Score=51.60 Aligned_cols=136 Identities=11% Similarity=0.033 Sum_probs=86.1
Q ss_pred CCCCceeeeeeCCCce------------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeC-CCC--CceE
Q psy16020 3 YPHPTPYPLNKILDTA------------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG-LPH--HSVR 66 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V------------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~-~~~--~pV~ 66 (151)
..+.+.+|+.+++... -...+.+++||++..||.|..++...+. .|.. +.. +.. ..+.
T Consensus 87 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~------~~~~~~~~~~~~~ 160 (689)
T 1yiq_A 87 ARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSV------DTRADHKRSYTIT 160 (689)
T ss_dssp TTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE------ECCSCTTSCCBCC
T ss_pred CCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeee------cCcCCCCCCcccc
Confidence 3577889998876431 1246678999999999999999975332 3543 222 110 1121
Q ss_pred -EEeeeCCEEEEEeC-------CeEEEEeCCCCcEEEEEEecC-CCC---------------------------CceeEE
Q psy16020 67 -SLAAVYNKVWCGYK-------NKIHVVDPKSLVVLKSFDAHP-RRE---------------------------SQVRQM 110 (151)
Q Consensus 67 -~m~~v~~~Lw~g~~-------n~I~vid~~t~~i~~~~~~h~-~~~---------------------------~~I~~m 110 (151)
+-.+.++.|+++++ +.|+.+|++|++..=++..-+ +.. ..-..+
T Consensus 161 ~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~ 240 (689)
T 1yiq_A 161 GAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSF 240 (689)
T ss_dssp SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCE
T ss_pred CCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccce
Confidence 11346899999873 589999999999887776311 100 001245
Q ss_pred EEeC-CEEEEEEcCCC-------------------eEEEEeCCccceeeeEeCC
Q psy16020 111 TWAG-DGVWVSIRLDS-------------------TLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 111 ~~~~-~~vwis~~~d~-------------------~l~lwd~~t~~~l~~idi~ 144 (151)
.+++ .+..+....++ .|..+|+.|++.+..+...
T Consensus 241 ~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~ 294 (689)
T 1yiq_A 241 AYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTT 294 (689)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESS
T ss_pred eEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecC
Confidence 5553 23333343333 5999999999999888754
No 211
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.29 E-value=0.00079 Score=57.12 Aligned_cols=115 Identities=10% Similarity=-0.010 Sum_probs=73.6
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC--------------CCCceEEEeeeC-CEEEEEeCC
Q psy16020 17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--------------PHHSVRSLAAVY-NKVWCGYKN 81 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~--------------~~~pV~~m~~v~-~~Lw~g~~n 81 (151)
.+..+...+++++.+..+| | +|+...+... ....+.... ...+|+++.+.. +.+.+++++
T Consensus 27 ~~~~~~w~g~~~~~~~~~~-i-~~d~~tg~~~---~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~~~~ 101 (706)
T 2z3z_A 27 YVVGLQWMGDNYVFIEGDD-L-VFNKANGKSA---QTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLFTQG 101 (706)
T ss_dssp -CTTCEEETTEEEEEETTE-E-EEEC----------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEEETT
T ss_pred cCCCCcCcCCeEEEEeCCc-E-EEECCCCcEe---eEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEEECC
Confidence 3444455566666666677 7 8886432110 011111110 015799999874 567777889
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc-----cceeee
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT-----YQHLQD 140 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t-----~~~l~~ 140 (151)
.|++||..+++..+... +. ..+..+.++++|-++....++.|++||..+ .+..+.
T Consensus 102 ~i~~~d~~~~~~~~l~~-~~---~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLFD-TN---EETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp EEEEEETTTTEEEEEEC-CT---TCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEES
T ss_pred EEEEEECCCCceEEccC-Cc---ccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEe
Confidence 99999999988755443 43 367788899888766667899999999998 766543
No 212
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.26 E-value=0.013 Score=50.61 Aligned_cols=136 Identities=13% Similarity=0.056 Sum_probs=87.2
Q ss_pred CCCCceeeeeeCCCce------------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCC--CceE-
Q psy16020 3 YPHPTPYPLNKILDTA------------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HSVR- 66 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V------------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~--~pV~- 66 (151)
..+.+.+|+.+++... -.+.+.+++||++..||.|..++...+. .|.. +++++. ..+.
T Consensus 83 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~------~~~~~~~~~~~~~ 156 (668)
T 1kv9_A 83 AASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQ------QTTDPAKPYSITG 156 (668)
T ss_dssp TTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEE------ECSCTTSSCBCCS
T ss_pred CCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeee------ccCCCCCcceecC
Confidence 3577889998876432 1245678899999999999999975332 3533 332210 1111
Q ss_pred EEeeeCCEEEEEeC-------CeEEEEeCCCCcEEEEEEecC-CCC---------------------------CceeEEE
Q psy16020 67 SLAAVYNKVWCGYK-------NKIHVVDPKSLVVLKSFDAHP-RRE---------------------------SQVRQMT 111 (151)
Q Consensus 67 ~m~~v~~~Lw~g~~-------n~I~vid~~t~~i~~~~~~h~-~~~---------------------------~~I~~m~ 111 (151)
.-.+.++.|+++++ +.|+.+|++|++..-++.... +.. .....+.
T Consensus 157 ~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a 236 (668)
T 1kv9_A 157 APRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMA 236 (668)
T ss_dssp CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEE
T ss_pred CCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceE
Confidence 12345899999874 589999999999988887421 100 0112345
Q ss_pred EeC--CEEEEEEcCC------------------CeEEEEeCCccceeeeEeCC
Q psy16020 112 WAG--DGVWVSIRLD------------------STLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 112 ~~~--~~vwis~~~d------------------~~l~lwd~~t~~~l~~idi~ 144 (151)
+++ +-|++...+. +.|..+|..|++.+-.++..
T Consensus 237 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~ 289 (668)
T 1kv9_A 237 YDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVT 289 (668)
T ss_dssp EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS
T ss_pred EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecC
Confidence 542 3445444332 25999999999999888764
No 213
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.26 E-value=0.033 Score=41.51 Aligned_cols=117 Identities=7% Similarity=-0.011 Sum_probs=81.4
Q ss_pred ceeeeEEe--CCeEEEEecC---CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEe
Q psy16020 17 TALPPVHV--QGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVD 87 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~n---G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid 87 (151)
....|... ++++|++-.. +.|.+++.+ |. ....+.-... .--+.|++- +++||++.. ++|+++|
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d--g~----~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD--GT----NRRILAQDNL-GLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEETT--SC----CCEEEECTTC-SCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEecC--CC----CcEEEEECCC-CCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 45677765 4789998753 678888753 32 2222221111 223566665 478998884 6899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
.++......+.. ......|+..++.+|++...++.|..+|..+++.++.|...
T Consensus 196 ~~g~~~~~~~~~----~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 196 PAQPGRRKVLEG----LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp TTEEEEEEEEEC----CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCS
T ss_pred cCCCceEEEecC----CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccc
Confidence 987655444442 23456788888899999999999999999999999999653
No 214
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.26 E-value=0.0024 Score=55.53 Aligned_cols=114 Identities=11% Similarity=0.198 Sum_probs=77.5
Q ss_pred CceeeeEEe-CCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCCCceEEEeee-CCEEEEEeCCeEEEEeCC
Q psy16020 16 DTALPPVHV-QGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPHHSVRSLAAV-YNKVWCGYKNKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~-~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~ 89 (151)
..|.+|... +++ +|+|+.+|-|..|+...+.. ..+... -+...|++|..- +++||+|..+-++.+|++
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~------~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~ 479 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV------ENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPE 479 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE------EEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETT
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE------EEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCC
Confidence 578898874 567 99999878899998653211 122111 112678898875 588999998889999999
Q ss_pred CCcEEEEEEe---cCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccce
Q psy16020 90 SLVVLKSFDA---HPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 90 t~~i~~~~~~---h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~ 137 (151)
+++...-... .......|.++..+.+| +|++.. . -|..||..+.+.
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 480 QRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI 529 (795)
T ss_dssp TTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE
T ss_pred CCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE
Confidence 9876543221 01122478999887555 699887 3 477888876544
No 215
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.26 E-value=0.0012 Score=55.98 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=74.4
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCCeEEEEeCCC---
Q psy16020 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKS--- 90 (151)
Q Consensus 16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n~I~vid~~t--- 90 (151)
..|.++.++++..++...+|+|.+|+... .+...+.....++.++.+. ++.|..+.+++|++||..+
T Consensus 82 ~~v~~~~~spd~~~~~~~~~~i~~~d~~~--------~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFTQGGLVGFDMLA--------RKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTTTEEEEEETTEEEEEETTT--------TEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTS
T ss_pred cCceeEEECCCCeEEEEECCEEEEEECCC--------CceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccc
Confidence 46888888765444444689999998742 1222332223667777776 3578777889999999999
Q ss_pred --CcEEEEEEecCCC-----------CCceeEEEEeCCEEEE-EEc---------------------------------C
Q psy16020 91 --LVVLKSFDAHPRR-----------ESQVRQMTWAGDGVWV-SIR---------------------------------L 123 (151)
Q Consensus 91 --~~i~~~~~~h~~~-----------~~~I~~m~~~~~~vwi-s~~---------------------------------~ 123 (151)
++..+....+... ...+..+.++++|-++ +.+ .
T Consensus 154 ~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 154 GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 8876544433220 0125788898776533 333 4
Q ss_pred CCeEEEEeCCcccee
Q psy16020 124 DSTLRMYNAHTYQHL 138 (151)
Q Consensus 124 d~~l~lwd~~t~~~l 138 (151)
+..|++||..+.+..
T Consensus 234 ~~~l~~~d~~~~~~~ 248 (706)
T 2z3z_A 234 HVTVGIYHLATGKTV 248 (706)
T ss_dssp EEEEEEEETTTTEEE
T ss_pred eeEEEEEECCCCceE
Confidence 578999999987654
No 216
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.0032 Score=54.63 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=76.4
Q ss_pred CceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCC-CCcceEEEeCCCCCceEEEeee-CCEEEEEeC-CeEEEEeCCCC
Q psy16020 16 DTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWD-LSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKSL 91 (151)
Q Consensus 16 ~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd-~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~-n~I~vid~~t~ 91 (151)
..|.+|...+ +.+|+|..+|-|..|+... +.+. +..+ -.+. ...|.+|..- ++.||+|.. +-++.+|.+++
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~~~~~~~~~--~~~~--~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGGGINVFENGK-RVAIYNKEN--RELL--SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLK 437 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSSCEEEEETTE-EEEECC-------CC--CSBEEEEEECTTSCEEEEETTEEEEEECSSSC
T ss_pred cceEEEEEcCCCCEEEEeCCCcEEEEECCC-CeEEEccCC--CCCC--CcceEEEEECCCCCEEEEeccCCEEEEcCCCC
Confidence 5688888754 7899999777788888642 1110 0000 0222 3789999875 688999995 68999999988
Q ss_pred cEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccce
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~ 137 (151)
+..+-... ......|.++....+ .+|++.. .-|..||..+.+.
T Consensus 438 ~~~~~~~~-~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 438 KFQIIELE-KNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKV 481 (781)
T ss_dssp EEEECCST-TTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSC
T ss_pred cEEEeccC-CCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeE
Confidence 76432211 112357999988854 5698876 4588899876443
No 217
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.24 E-value=0.012 Score=44.96 Aligned_cols=112 Identities=6% Similarity=0.038 Sum_probs=73.5
Q ss_pred ceeeeEEe-CCeEEE-EecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC------CeEEEEe
Q psy16020 17 TALPPVHV-QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK------NKIHVVD 87 (151)
Q Consensus 17 ~V~~i~~~-~~~v~v-gl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~------n~I~vid 87 (151)
.+.++.+. ++++|+ +..+|.|.+|+... + ....+... +...+.+|++. +++||++.. +.|++||
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-~-----~~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPET-K-----EIKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTT-C-----CEEEEEEC-SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCC-C-----cEEEEeeC-CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 45566664 456775 56788899987642 2 11222222 22678899886 568998873 3899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcC------CCeEEEEeCCccc
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRL------DSTLRMYNAHTYQ 136 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~------d~~l~lwd~~t~~ 136 (151)
+++++..+.+... .....++.+..+++| +|++... .+.|..||..+.+
T Consensus 119 ~~~~~~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 119 ENGDNLQDIIEDL-STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp TTSCSCEEEECSS-SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred CCCCEEEEEEccC-ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE
Confidence 9998876554422 123478999998664 6888765 3678888876543
No 218
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.17 E-value=0.036 Score=41.57 Aligned_cols=106 Identities=10% Similarity=0.070 Sum_probs=72.3
Q ss_pred CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE--Ee--CCCCCceEEEeee-CCEEEEEeC--------
Q psy16020 16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV--TL--GLPHHSVRSLAAV-YNKVWCGYK-------- 80 (151)
Q Consensus 16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i--~l--~~~~~pV~~m~~v-~~~Lw~g~~-------- 80 (151)
..+.+|...+ +++|++..++.|.+|+.. |.. ..+ .. +.+...++++++- ++++|++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~--g~~-----~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTD--GTF-----EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETT--SCE-----EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCC--CCE-----EEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccc
Confidence 5677787754 689999877778888764 321 111 11 1111346788775 578999874
Q ss_pred ---------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe----CCE--EEEEEcCCCeEEEEeCC
Q psy16020 81 ---------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA----GDG--VWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 81 ---------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~----~~~--vwis~~~d~~l~lwd~~ 133 (151)
+.|+.+|++ ++........ ...+.++++ +++ +|++...++.|.+||..
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-GQMIQVDTAF----QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-SCEEEEEEEE----SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred ccccccCCCCeEEEECCC-CCEEEeccCC----CCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 479999987 7765544422 256778888 765 68888889999999976
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.15 E-value=0.042 Score=42.50 Aligned_cols=112 Identities=14% Similarity=0.092 Sum_probs=72.6
Q ss_pred eeeeeCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCC--CCCceEEEeee-CCEEEEEeC---
Q psy16020 9 YPLNKILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGL--PHHSVRSLAAV-YNKVWCGYK--- 80 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~--~~~pV~~m~~v-~~~Lw~g~~--- 80 (151)
...+.++..|.+|... ++++|++..+| |.+|+... |. ...+ .... +...++.+.+- ++++|++..
T Consensus 83 ~~~~~~~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~-g~-----~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~ 155 (326)
T 2ghs_A 83 KTVHALPFMGSALAKISDSKQLIASDDG-LFLRDTAT-GV-----LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK 155 (326)
T ss_dssp EEEEECSSCEEEEEEEETTEEEEEETTE-EEEEETTT-CC-----EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT
T ss_pred EEEEECCCcceEEEEeCCCeEEEEECCC-EEEEECCC-Cc-----EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc
Confidence 3445667788888764 67899998655 88887532 21 1122 1111 11346677665 467999873
Q ss_pred -----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCC
Q psy16020 81 -----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 81 -----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~ 133 (151)
+.|+.+| ++++..... +. ...+.++++++ .+|++...++.|.+||..
T Consensus 156 ~~~~~~~l~~~~--~g~~~~~~~-~~---~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 156 AETGAGSIYHVA--KGKVTKLFA-DI---SIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp CCTTCEEEEEEE--TTEEEEEEE-EE---SSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCCceEEEEEe--CCcEEEeeC-CC---cccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 4799999 576654333 21 25678888855 468888888999999975
No 220
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.12 E-value=0.0086 Score=51.74 Aligned_cols=110 Identities=14% Similarity=0.177 Sum_probs=73.2
Q ss_pred CceeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEE
Q psy16020 16 DTALPPVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVL 94 (151)
Q Consensus 16 ~~V~~i~~-~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~ 94 (151)
..|.+|.. .++++|+|..+| |..|+...+ .+ ..+ .......|+++...++.||+|+.+.++.+|.++.++.
T Consensus 63 ~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~-~f--~~~----~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGTDNG-ILVYNYRAD-RY--EQP----ETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKLT 134 (758)
T ss_dssp SCEEEEEEETTTEEEEEETTE-EEEEETTTT-EE--CCC----SCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCEE
T ss_pred ceEEEEEEcCCCcEEEEeCCC-eEEEeCCCC-EE--ECc----ccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeEE
Confidence 46888765 457899999776 788886532 11 111 1111256888877789999999889999999887764
Q ss_pred EEEEe--cCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccc
Q psy16020 95 KSFDA--HPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 95 ~~~~~--h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~ 136 (151)
+ +.. .......|.+|..+ ...+|+... . =|..||..+.+
T Consensus 135 ~-~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~ 176 (758)
T 3ott_A 135 S-FDTRRNGLPNNTIYSIIRTKDNQIYVGTY-N-GLCRYIPSNGK 176 (758)
T ss_dssp E-ECHHHHCCSCSCEEEEEECTTCCEEEEET-T-EEEEEETTTTE
T ss_pred E-eccCCCCcCCCeEEEEEEcCCCCEEEEeC-C-CHhhCccCCCc
Confidence 3 311 11123468888887 456798775 3 47778876543
No 221
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.10 E-value=0.013 Score=52.38 Aligned_cols=109 Identities=7% Similarity=-0.017 Sum_probs=72.5
Q ss_pred ceeeeEEeCC-eEEEEecCCcEE-EEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCC
Q psy16020 17 TALPPVHVQG-RVVCALADGSVA-IFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSL 91 (151)
Q Consensus 17 ~V~~i~~~~~-~v~vgl~nG~l~-v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~ 91 (151)
.+.++.+.++ +++.+..++.|. +|+... .....+..+...+.++.+.. +.|..++. +.|++||++++
T Consensus 339 ~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~--------~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 339 RYVRRGGDTKVAFIHGTREGDFLGIYDYRT--------GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEETTT--------CCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred eEEeeeEcCCCeEEEEECCCceEEEEECCC--------CCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 4555555422 344444466676 776532 11223333347788888863 56777765 68999999999
Q ss_pred cEEEEEEecCCCCCceeEEEEeCCEEEE-EEcCC----------CeEEEEeCCccc
Q psy16020 92 VVLKSFDAHPRRESQVRQMTWAGDGVWV-SIRLD----------STLRMYNAHTYQ 136 (151)
Q Consensus 92 ~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~~d----------~~l~lwd~~t~~ 136 (151)
+..+.+..|.. .+..+.++++|-++ +.+.+ +.|++||..+.+
T Consensus 411 ~~~~~~~~~~~---~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 411 KPTVIERSREA---MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp CEEEEEECSSS---CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ceEEeccCCCC---CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 99888877764 78889999877543 33332 599999999876
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.08 E-value=0.023 Score=43.21 Aligned_cols=121 Identities=13% Similarity=0.069 Sum_probs=76.0
Q ss_pred ceeeeEEe-CCeEEEEecC----------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CC
Q psy16020 17 TALPPVHV-QGRVVCALAD----------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KN 81 (151)
Q Consensus 17 ~V~~i~~~-~~~v~vgl~n----------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n 81 (151)
.+.++... ++++|++... +.-.+|+.+.++. ......- . ...+.+++. ++.||++. .+
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~~-~--~~pngi~~spdg~~lyv~~~~~~ 171 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFDQ-V--DISNGLDWSLDHKIFYYIDSLSY 171 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEEE-E--SBEEEEEECTTSCEEEEEEGGGT
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC----EEEEeec-c--ccccceEEcCCCCEEEEecCCCC
Confidence 35666654 4679988632 2345665554332 1111111 1 223567765 35687766 46
Q ss_pred eEEEEeC--CCCcEE--EEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020 82 KIHVVDP--KSLVVL--KSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDIE 144 (151)
Q Consensus 82 ~I~vid~--~t~~i~--~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~idi~ 144 (151)
+|+++|. +++++. +.+............|+.+.+ .+|++...++.|..||..+++.+..|.+.
T Consensus 172 ~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 172 SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 8999975 677653 223322212246788888854 57999999999999999999999999754
No 223
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.04 E-value=0.011 Score=44.64 Aligned_cols=110 Identities=8% Similarity=0.122 Sum_probs=69.1
Q ss_pred ceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcE
Q psy16020 17 TALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVV 93 (151)
Q Consensus 17 ~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i 93 (151)
.+..|.+.+ +.+++...++.|.+|+...+|... .....+ ......+++|++- +++||++.++.|++||++ ++.
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-~~~~~~--~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE-YQGVHF--TVEPGKTDGLRVDAGGLIWASAGDGVHVLTPD-GDE 248 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE-EEEEEE--CCSSSCCCSEEEBTTSCEEEEETTEEEEECTT-SCE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-CCCeEe--eCCCCCCCeEEECCCCCEEEEcCCeEEEECCC-CCE
Confidence 345555543 345555667889999886444310 112233 1112445677775 578999998899999997 788
Q ss_pred EEEEEecCCCCCceeEEEEe-CC--EEEEEEcCCCeEEEEeCCccc
Q psy16020 94 LKSFDAHPRRESQVRQMTWA-GD--GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 94 ~~~~~~h~~~~~~I~~m~~~-~~--~vwis~~~d~~l~lwd~~t~~ 136 (151)
...+..+. . +.++++. ++ .+|++..+ .|.-++..+.+
T Consensus 249 ~~~~~~~~---~-~~~~~f~~~d~~~L~v~t~~--~l~~~~~~~~~ 288 (296)
T 3e5z_A 249 LGRVLTPQ---T-TSNLCFGGPEGRTLYMTVST--EFWSIETNVRG 288 (296)
T ss_dssp EEEEECSS---C-CCEEEEESTTSCEEEEEETT--EEEEEECSCCB
T ss_pred EEEEECCC---C-ceeEEEECCCCCEEEEEcCC--eEEEEEccccc
Confidence 88888664 2 7888885 33 57877653 45556666543
No 224
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.00 E-value=0.00095 Score=56.61 Aligned_cols=118 Identities=9% Similarity=0.069 Sum_probs=76.2
Q ss_pred CceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCC---ceEEEeeeC--CEEEEEeC---------
Q psy16020 16 DTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH---SVRSLAAVY--NKVWCGYK--------- 80 (151)
Q Consensus 16 ~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~---pV~~m~~v~--~~Lw~g~~--------- 80 (151)
..+.++.+.+ +++++...||+|.+|+...+. . ...+..+.. .|.++.+.. +.|..++.
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~-----~--~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNT-----S--TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCC-----C--EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCc-----E--EEEeccccccccccceEEECCCCCEEEEEecCccceeecc
Confidence 4456666653 343334578999888764211 1 122222212 488888873 56777764
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+.|++||.++++. +.+..+......+..+.++++|-+++...+..|++||..+.+..+..
T Consensus 90 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp CSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEE
T ss_pred eeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEe
Confidence 6799999999987 55554433233588888998886666666689999999987766544
No 225
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.0025 Score=51.24 Aligned_cols=115 Identities=8% Similarity=0.057 Sum_probs=74.3
Q ss_pred CCeEEEEecCCcEEEEEcCCCC-CCCCCcc---eEEEeCCCCCceEEEeeeCCEEEEE--e-CCeEEEEeCCCCcEEEEE
Q psy16020 25 QGRVVCALADGSVAIFRRGPDG-QWDLSKY---HTVTLGLPHHSVRSLAAVYNKVWCG--Y-KNKIHVVDPKSLVVLKSF 97 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~---~~i~l~~~~~pV~~m~~v~~~Lw~g--~-~n~I~vid~~t~~i~~~~ 97 (151)
++.||+|..||.|..+++..+. .|.++.. ..+....+..+ .++.+|++ . +++||.+|++++..+-.+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~------~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRL------ETYETLIIEPFGDGNIYYFNAHQGLQKLPL 83 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTT------TSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccc------cCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence 4689999999999999985422 4655432 11111110010 24578876 3 579999999999766656
Q ss_pred EecCCC-CCceeE---EEE------eCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 98 DAHPRR-ESQVRQ---MTW------AGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 98 ~~h~~~-~~~I~~---m~~------~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
....-. .+++.. .+. +.++..+.++.++.+...|++|++.+.+.....
T Consensus 84 ~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~ 141 (339)
T 2be1_A 84 SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGS 141 (339)
T ss_dssp EHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTC
T ss_pred ccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCC
Confidence 543110 112221 001 256777899999999999999999999997653
No 226
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.97 E-value=0.0054 Score=51.94 Aligned_cols=118 Identities=8% Similarity=0.031 Sum_probs=71.4
Q ss_pred eeeeEEeCC--eEEEEecC---------CcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeee--CCEEEEEeCCeE
Q psy16020 18 ALPPVHVQG--RVVCALAD---------GSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAV--YNKVWCGYKNKI 83 (151)
Q Consensus 18 V~~i~~~~~--~v~vgl~n---------G~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v--~~~Lw~g~~n~I 83 (151)
|.++.++++ +|..+..+ |.|.+|+...+. ...+... .+...++++.+. ++.|..++.++|
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~------~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i 136 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD------PQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNI 136 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC------CEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc------eEeccCCccccccccccEECCCCCEEEEEECCeE
Confidence 777777643 45555443 667777654211 1122211 111336777776 357888888999
Q ss_pred EEEeCCCCcEEEEEEecCCCC---------------CceeEEEEeCCEEE-EEEcCC-----------------------
Q psy16020 84 HVVDPKSLVVLKSFDAHPRRE---------------SQVRQMTWAGDGVW-VSIRLD----------------------- 124 (151)
Q Consensus 84 ~vid~~t~~i~~~~~~h~~~~---------------~~I~~m~~~~~~vw-is~~~d----------------------- 124 (151)
+++|..+++..+....+.... ..+..+.++++|-+ ++.+.+
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY 216 (723)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred EEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceec
Confidence 999999998877666543210 13378889877642 233222
Q ss_pred -----------CeEEEEeCCccceeeeE
Q psy16020 125 -----------STLRMYNAHTYQHLQDV 141 (151)
Q Consensus 125 -----------~~l~lwd~~t~~~l~~i 141 (151)
..|++||..+.+....+
T Consensus 217 ~~~~~G~~~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 217 HYPKAGSENPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp ECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred cCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence 28999999988754444
No 227
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.91 E-value=0.098 Score=40.73 Aligned_cols=127 Identities=9% Similarity=0.004 Sum_probs=74.4
Q ss_pred CceeeeEEeCC--eEEEEec-CCcEEEEEcCC-CCCCCCCcceEEEeCCC-----CC------ceEEEe-ee--CCEEEE
Q psy16020 16 DTALPPVHVQG--RVVCALA-DGSVAIFRRGP-DGQWDLSKYHTVTLGLP-----HH------SVRSLA-AV--YNKVWC 77 (151)
Q Consensus 16 ~~V~~i~~~~~--~v~vgl~-nG~l~v~~~~~-~~~wd~~~~~~i~l~~~-----~~------pV~~m~-~v--~~~Lw~ 77 (151)
..+..+.+.++ ++|++.. +|+|.+|+++. .|.... ....+..-.. .. .+..+. +. ++.||+
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY-THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE-ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 45777777643 6888875 68999998753 232110 0112332110 11 477888 65 357998
Q ss_pred EeC--C-----eEEEEeCC-CCcEEEE---EEecCCCCCceeEEEEe-----CCEEEEEEcCCCeEEEEeCCc--cceee
Q psy16020 78 GYK--N-----KIHVVDPK-SLVVLKS---FDAHPRRESQVRQMTWA-----GDGVWVSIRLDSTLRMYNAHT--YQHLQ 139 (151)
Q Consensus 78 g~~--n-----~I~vid~~-t~~i~~~---~~~h~~~~~~I~~m~~~-----~~~vwis~~~d~~l~lwd~~t--~~~l~ 139 (151)
+.. + +|.+||.+ ++++.+. +..+.. .+..++++ |..++++...++.|++|+... .+.+.
T Consensus 272 ~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~---~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~~~~ 348 (365)
T 1jof_A 272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTS---GGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVA 348 (365)
T ss_dssp EEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSC---CTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEE
T ss_pred ECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCC---CcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCceee
Confidence 873 4 89999985 7776653 332322 34445554 445566656679999998764 33344
Q ss_pred eEeCCcc
Q psy16020 140 DVDIEPY 146 (151)
Q Consensus 140 ~idi~~~ 146 (151)
++++..+
T Consensus 349 ~~~~~~p 355 (365)
T 1jof_A 349 RVRIPEP 355 (365)
T ss_dssp EEECCST
T ss_pred EEEcCCC
Confidence 5555443
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.89 E-value=0.059 Score=41.67 Aligned_cols=103 Identities=11% Similarity=0.113 Sum_probs=66.7
Q ss_pred eeEEeC--Ce-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020 20 PPVHVQ--GR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLK 95 (151)
Q Consensus 20 ~i~~~~--~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~ 95 (151)
...+.+ +. +|++..+|.|..|+... + ....+.+. ..+.++... ++++|+++.+.|+++|++++++..
T Consensus 53 gp~~~~~~~~l~~~d~~~~~i~~~d~~~-~-----~~~~~~~~---~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILERELHELHLAS-G-----RKTVHALP---FMGSALAKISDSKQLIASDDGLFLRDTATGVLTL 123 (326)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTT-T-----EEEEEECS---SCEEEEEEEETTEEEEEETTEEEEEETTTCCEEE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEECCC-C-----cEEEEECC---CcceEEEEeCCCeEEEEECCCEEEEECCCCcEEE
Confidence 445554 44 55666778898887642 1 12233332 578888875 689999998899999999998754
Q ss_pred EEEecC-CCCCceeEEEEeCCE-EEEEEcC------CCeEEEEe
Q psy16020 96 SFDAHP-RRESQVRQMTWAGDG-VWVSIRL------DSTLRMYN 131 (151)
Q Consensus 96 ~~~~h~-~~~~~I~~m~~~~~~-vwis~~~------d~~l~lwd 131 (151)
-..... .....++.+.++++| +|++... .+.|..+|
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 332111 112468899998665 6887653 35677776
No 229
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.84 E-value=0.053 Score=46.10 Aligned_cols=90 Identities=10% Similarity=0.013 Sum_probs=60.3
Q ss_pred CCCCceeeeeeCCCce----------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCC--CceEE-E
Q psy16020 3 YPHPTPYPLNKILDTA----------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HSVRS-L 68 (151)
Q Consensus 3 ~~~~~~l~~i~l~~~V----------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~--~pV~~-m 68 (151)
..+.+.+|+..++.+. ....+.+++||++..+|.|..++...+. .|. .+++.+. ..+.+ -
T Consensus 85 ~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~------~~~~~~~~~~~~~~sP 158 (582)
T 1flg_A 85 AKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWK------KKFADHGAGYTMTGAP 158 (582)
T ss_dssp SSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEE------EECSCGGGTCBCCSCC
T ss_pred CCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEee------ecCCCCCcCcccccCC
Confidence 4577889999887532 2345678999999999999999975432 353 2333210 11211 1
Q ss_pred eeeCC------EEEEEe-------CCeEEEEeCCCCcEEEEEE
Q psy16020 69 AAVYN------KVWCGY-------KNKIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 69 ~~v~~------~Lw~g~-------~n~I~vid~~t~~i~~~~~ 98 (151)
.+.++ .|++|+ .+.|+.+|++|++..=++.
T Consensus 159 ~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 159 TIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred EEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 23456 899987 4689999999999876554
No 230
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.81 E-value=0.0022 Score=54.61 Aligned_cols=108 Identities=10% Similarity=0.150 Sum_probs=71.3
Q ss_pred eeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CC---CceEEEeee--CCEEEEEeC----------Ce
Q psy16020 20 PPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PH---HSVRSLAAV--YNKVWCGYK----------NK 82 (151)
Q Consensus 20 ~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~---~pV~~m~~v--~~~Lw~g~~----------n~ 82 (151)
++.+.+ ++++++..||+|.+|+... | +...+-. +. ..+.++.+. ++.|..++. +.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~-g-------~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIET-G-------QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSS-C-------CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCC-C-------cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 445543 3555566799999998642 1 1222222 11 147888886 356776664 68
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
|++||.++++....... + ..+..+.++++|-+++...++.|++||..+.+..+
T Consensus 92 i~~~d~~~g~~~~~~~l-~---~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNEL-P---RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp EEEEETTTTEECCSSCC-C---SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred EEEEECCCCccccceec-C---cccccceECCCCCEEEEEECCeEEEEeCCCCCcEE
Confidence 99999999987311111 1 35888999999887777789999999998876644
No 231
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.69 E-value=0.01 Score=50.51 Aligned_cols=94 Identities=13% Similarity=0.056 Sum_probs=59.8
Q ss_pred eeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCCeEEEEeCCCCcE
Q psy16020 18 ALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLVV 93 (151)
Q Consensus 18 V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n~I~vid~~t~~i 93 (151)
|.++.++++ +++++. +|+|.+|+...+.. +....+.....+++++.+. ++.|..++++.|++||..+++.
T Consensus 111 v~~~~~SpDg~~l~~~~-~~~i~~~d~~~~~~-----~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPL-GGELYLYDLKQEGK-----AAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQ 184 (741)
T ss_dssp SCCCEECTTSSEEEEEE-TTEEEEEESSSCST-----TSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEE
T ss_pred cceeEECCCCCEEEEEe-CCcEEEEECCCCCc-----ceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCE
Confidence 667777643 455555 59999998753210 0112333333778888886 3568888888999999999887
Q ss_pred EEEEEecCCC-------------CCceeEEEEeCCEE
Q psy16020 94 LKSFDAHPRR-------------ESQVRQMTWAGDGV 117 (151)
Q Consensus 94 ~~~~~~h~~~-------------~~~I~~m~~~~~~v 117 (151)
.+....+... ...+..+.++++|-
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~ 221 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS 221 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCC
Confidence 6655444210 01146788887765
No 232
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.67 E-value=0.007 Score=52.17 Aligned_cols=112 Identities=7% Similarity=0.081 Sum_probs=72.3
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCC---Cce--EEEeee--CCEEEEEeC---------
Q psy16020 17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH---HSV--RSLAAV--YNKVWCGYK--------- 80 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~---~pV--~~m~~v--~~~Lw~g~~--------- 80 (151)
...++.+.++--|+..+||+|.+|+...+. . .. -+..+. ..+ ....+. ++.|..+++
T Consensus 18 ~~~~~~w~~dg~~~~~~~~~i~~~~~~~~~-----~-~~-~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQENNILVFNAEYGN-----S-SV-FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCEEECSSSEEEEEETTEEEEEETTTCC-----E-EE-EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccccEECCCCcEEEEcCCcEEEEECCCCc-----e-EE-EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 355667765432333349999999875322 1 11 122211 112 113333 456777775
Q ss_pred -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020 81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
+.+++||.++++..+ +..|. ..+....++++|-++++..+..|++||..+++..+
T Consensus 91 ~~~~~~~d~~~~~~~~-l~~~~---~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 91 TASYDIYDLNKRQLIT-EERIP---NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR 146 (740)
T ss_dssp EEEEEEEETTTTEECC-SSCCC---TTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred ceEEEEEECCCCcEEE-cccCC---CcceeeEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence 578899999998654 54454 37899999999988888889999999998876543
No 233
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.51 E-value=0.072 Score=39.97 Aligned_cols=109 Identities=9% Similarity=0.017 Sum_probs=71.2
Q ss_pred CceeeeEEeC-Ce--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCC
Q psy16020 16 DTALPPVHVQ-GR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~~-~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~ 89 (151)
...-++.+.+ ++ +|++..+|.|..|+... . ...+... ...+.+|++. +++||++.. +.|++||++
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~------~-~~~~~~~--~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG------Q-LSPEMHP--SHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS------C-EEEEESS--CSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCC------C-eEEEECC--CCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 3455666653 23 77788889999998642 1 2333333 3677888885 577998883 589999999
Q ss_pred CCcEEEEEEecCC-CCCceeEEEEeCCE-EEEEEc-----------------CCCeEEEEeCC
Q psy16020 90 SLVVLKSFDAHPR-RESQVRQMTWAGDG-VWVSIR-----------------LDSTLRMYNAH 133 (151)
Q Consensus 90 t~~i~~~~~~h~~-~~~~I~~m~~~~~~-vwis~~-----------------~d~~l~lwd~~ 133 (151)
+++.+.-...... ....++.++.+++| +|++.. ..+.|..+|..
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 9987655443221 12356788888665 588742 24577777775
No 234
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.47 E-value=0.034 Score=49.81 Aligned_cols=112 Identities=11% Similarity=0.005 Sum_probs=75.9
Q ss_pred ceeeeEEe-CC-e-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCC-ceEEEeeeCC-EEEEEeC-CeEE-EEeCC
Q psy16020 17 TALPPVHV-QG-R-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH-SVRSLAAVYN-KVWCGYK-NKIH-VVDPK 89 (151)
Q Consensus 17 ~V~~i~~~-~~-~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~-pV~~m~~v~~-~Lw~g~~-n~I~-vid~~ 89 (151)
.+.++.+. ++ + +..+ ++|.|.+++.. ......+..+.. .++++.+.++ .|+.+++ +.|+ ++|.+
T Consensus 297 ~v~~~~~S~pdG~~la~~-~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFV-SRGQAFIQDVS--------GTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp GGGEEEEEECGGGCEEEE-ETTEEEEECTT--------SSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETT
T ss_pred ccceeeecCCCCCEEEEE-EcCEEEEEcCC--------CCceEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECC
Confidence 57788877 43 3 4433 38888887653 122334443334 7888877732 4665554 5899 99999
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+++... +..|. ..+..+.++++|- .++.+.++.|++||..+++....+
T Consensus 368 ~~~~~~-l~~~~---~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 368 TGKAEK-FEENL---GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp TCCEEE-CCCCC---CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCceE-ecCCc---cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 887654 33553 4799999997765 557788899999999998876655
No 235
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.46 E-value=0.24 Score=39.78 Aligned_cols=114 Identities=11% Similarity=0.011 Sum_probs=75.5
Q ss_pred CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE----EeCCC-CCceEEEeee--CCEEEEEeC--CeEE
Q psy16020 16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV----TLGLP-HHSVRSLAAV--YNKVWCGYK--NKIH 84 (151)
Q Consensus 16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i----~l~~~-~~pV~~m~~v--~~~Lw~g~~--n~I~ 84 (151)
..+.++...+ +++|++-.+|.|..|+.... ....+ ..+.. ..|.+.|++. ++.||++.. ++|+
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~------~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ------EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTTCEEEEEETTTC------CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcEEEEEeCCCCeEEEEECCCcEEEEECCCC------CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 4566677664 78999888898998886421 11222 11110 1344478876 478999873 6899
Q ss_pred EEeCCCCcEEEEEEecCC------------CCCceeEEEEeCCE-EEEEEc-CCCeEEEEeCCccce
Q psy16020 85 VVDPKSLVVLKSFDAHPR------------RESQVRQMTWAGDG-VWVSIR-LDSTLRMYNAHTYQH 137 (151)
Q Consensus 85 vid~~t~~i~~~~~~h~~------------~~~~I~~m~~~~~~-vwis~~-~d~~l~lwd~~t~~~ 137 (151)
.||.+.. ...+.++.. .......|+++++| +|++-+ ....|+.||..+++.
T Consensus 293 ~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 293 KITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 9987643 344554430 12358889998665 799999 999999999766654
No 236
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.45 E-value=0.033 Score=46.11 Aligned_cols=106 Identities=9% Similarity=-0.073 Sum_probs=67.1
Q ss_pred eeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-C----CeEEEEeCCC
Q psy16020 19 LPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-K----NKIHVVDPKS 90 (151)
Q Consensus 19 ~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~----n~I~vid~~t 90 (151)
.++...++ .+|++..++.+.+|+... .+...+.. .|-.+..+. +..|..++ + ..|+++|+++
T Consensus 115 ~~~s~dg~~~~~~s~~~~~~~l~d~~~--------g~~~~l~~--~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 115 LSGVDTGEAVVFTGATEDRVALYALDG--------GGLRELAR--LPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS 184 (582)
T ss_dssp EEEEECSSCEEEEEECSSCEEEEEEET--------TEEEEEEE--ESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred eeeCCCCCeEEEEecCCCCceEEEccC--------CcEEEeec--CCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence 34444443 477777777777886532 12222222 111454553 45555444 3 4699999999
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEEEE-EEcCCC--eEEEEeCCcccee
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDS--TLRMYNAHTYQHL 138 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~~d~--~l~lwd~~t~~~l 138 (151)
++.. ++..|.. .+....++++|-++ +.++++ .|++||..+.+..
T Consensus 185 g~~~-~l~~~~~---~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 185 GGLR-VFDSGEG---SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CCCE-EECCSSC---EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCce-EeecCCC---ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 9875 6666653 78999999877533 555677 8999999987765
No 237
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.36 E-value=0.025 Score=46.84 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=54.0
Q ss_pred EeCCCCCceEEEeeeC--CEEEEEeC-C--eEEEEeCCCCcEEEEEEecCCCCCceeEEE--------EeCCE-EEEEEc
Q psy16020 57 TLGLPHHSVRSLAAVY--NKVWCGYK-N--KIHVVDPKSLVVLKSFDAHPRRESQVRQMT--------WAGDG-VWVSIR 122 (151)
Q Consensus 57 ~l~~~~~pV~~m~~v~--~~Lw~g~~-n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~--------~~~~~-vwis~~ 122 (151)
.+......++...+.. +.|+.+.. + +|++||.++++.. .+..|.. .+..+. ++++| ++++.+
T Consensus 189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~spdg~~~~~~~ 264 (582)
T 3o4h_A 189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK---DFSSYRPTAITWLGYLPDGRLAVVAR 264 (582)
T ss_dssp EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS---HHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc---ChhhhhhccccceeEcCCCcEEEEEE
Confidence 4444347788888873 56775543 4 7999999999988 6666643 455445 77664 688899
Q ss_pred CCCeEEEEeCCcccee
Q psy16020 123 LDSTLRMYNAHTYQHL 138 (151)
Q Consensus 123 ~d~~l~lwd~~t~~~l 138 (151)
.++.+++|+. ++.+
T Consensus 265 ~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 265 REGRSAVFID--GERV 278 (582)
T ss_dssp ETTEEEEEET--TEEE
T ss_pred cCCcEEEEEE--CCee
Confidence 9999999998 5444
No 238
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.35 E-value=0.039 Score=42.04 Aligned_cols=95 Identities=7% Similarity=0.031 Sum_probs=59.0
Q ss_pred eeEEeC--CeEEEEecC------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCC
Q psy16020 20 PPVHVQ--GRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKS 90 (151)
Q Consensus 20 ~i~~~~--~~v~vgl~n------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t 90 (151)
.|.+.+ +.+|++-.. +.|.+|+...++ +.....+.-.. ..-...|.+- +++||++.++.|++||+ +
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~---l~~~~~~~~~~-~~~pdgi~~d~~G~lwv~~~~gv~~~~~-~ 266 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA---LHDRRHFASVP-DGLPDGFCVDRGGWLWSSSGTGVCVFDS-D 266 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTE---EEEEEEEECCS-SSCCCSEEECTTSCEEECCSSEEEEECT-T
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC---ccCCeEEEECC-CCCCCeEEECCCCCEEEecCCcEEEECC-C
Confidence 344443 358888765 689998875433 22222221111 1223455553 46799999889999999 5
Q ss_pred CcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcC
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRL 123 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~ 123 (151)
++....+.... .+..++++ +..+|++..+
T Consensus 267 g~~~~~~~~~~----~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 267 GQLLGHIPTPG----TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp SCEEEEEECSS----CCCEEEECTTSCEEEEEETT
T ss_pred CCEEEEEECCC----ceeEEEEeCCCCEEEEEcCC
Confidence 77777777543 47777885 4457887763
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.12 E-value=0.019 Score=47.94 Aligned_cols=72 Identities=14% Similarity=0.210 Sum_probs=56.9
Q ss_pred CCEEEEEeC--CeEEEEeCCCC----cEEEEEE---ecCC-CCCceeEEEEeCCEEEEEEcCC------CeEEEEeCCcc
Q psy16020 72 YNKVWCGYK--NKIHVVDPKSL----VVLKSFD---AHPR-RESQVRQMTWAGDGVWVSIRLD------STLRMYNAHTY 135 (151)
Q Consensus 72 ~~~Lw~g~~--n~I~vid~~t~----~i~~~~~---~h~~-~~~~I~~m~~~~~~vwis~~~d------~~l~lwd~~t~ 135 (151)
.++||+++. ++|||||..|. ++.++++ .++. ..+.-+.+.+.++|+++|+..+ +.|-++|..|+
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTC
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCC
Confidence 477999994 68999998876 8999996 2110 1235677778888899988888 78999999999
Q ss_pred ceeeeEeC
Q psy16020 136 QHLQDVDI 143 (151)
Q Consensus 136 ~~l~~idi 143 (151)
+.+..+..
T Consensus 175 ~v~~~~~~ 182 (462)
T 2ece_A 175 EPLGKWEI 182 (462)
T ss_dssp CEEEECCS
T ss_pred eEEEEEcc
Confidence 99998853
No 240
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=95.99 E-value=0.0062 Score=53.51 Aligned_cols=98 Identities=10% Similarity=0.133 Sum_probs=61.2
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLK 95 (151)
Q Consensus 16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~ 95 (151)
.|.+.....++.++|+|.||-+.-++|.+++.|+ +..+.-+..-.+++.+ |-+ ++++
T Consensus 162 ~Ph~L~avs~~~liVsL~DGGLLrL~r~~~~d~~---~~~Fnd~s~l~SL~~l-------f~~-~~~~------------ 218 (729)
T 3f7f_A 162 VPHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHYE---PLLFNDNSYLKCLTRF-------FSR-SSKS------------ 218 (729)
T ss_dssp CEEEEEECSSSBEEEEETTSCEECCEESSSSCEE---CCCCCCCGGGGGGSTT-------CCT-TCSS------------
T ss_pred CCcEEEEECCCeEEEEEcCCCEEEEEeccCCCcc---eeeecCCchhhhhHHh-------hcC-CCCC------------
Confidence 3444555567789999999999999998665441 1111111111334432 110 1111
Q ss_pred EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020 96 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 143 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi 143 (151)
+.+..|.++... +...++...|.+||+|+..|++++++.|+
T Consensus 219 ------~~~~~Is~~~~~-~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 219 ------DYDSVISCKLFH-ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp ------CCCCEEEEEEET-TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ------CcCceEEEeccC-CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 111356666654 55566999999999999999999999998
No 241
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=95.73 E-value=0.048 Score=49.11 Aligned_cols=96 Identities=16% Similarity=0.254 Sum_probs=56.7
Q ss_pred eCCeEEEEecCCcEEEEEcCC-CCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecCC
Q psy16020 24 VQGRVVCALADGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPR 102 (151)
Q Consensus 24 ~~~~v~vgl~nG~l~v~~~~~-~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~ 102 (151)
.++.++|++.||-|.-++|++ ++.|. ...+.-+..-.+++.+.... .+.....
T Consensus 180 ~~~~l~Vsl~dGgLlrl~r~~~~~~~~---~~~f~~~s~~~sl~~l~~~~-----------------------~~~~~~~ 233 (950)
T 4gq2_M 180 STSEICVSFFNGGLTKIILNPKDASHY---EQHIDDSSYLFSLKKYLSLQ-----------------------AFKADYR 233 (950)
T ss_dssp SSSEEEEEETTSCEEEEEEETTTTEEE---EEEECCCCCCCBCC------------------------------CCSSCC
T ss_pred cCCeEEEEECCCCEEEEEecCCCCCcc---eeeecCCcHHHhhhhhcccc-----------------------cCCCCCC
Confidence 467899999999999998853 33331 11111111113343333210 0011111
Q ss_pred CCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020 103 RESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 145 (151)
Q Consensus 103 ~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~idi~~ 145 (151)
....|.+++..+ ....++..+|.+||+|+..|++++.+.|+..
T Consensus 234 ~~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~ 277 (950)
T 4gq2_M 234 SPNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 277 (950)
T ss_dssp CTTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCC
T ss_pred CcceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccc
Confidence 122556666654 4556699999999999999999999999854
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.70 E-value=0.29 Score=37.39 Aligned_cols=108 Identities=9% Similarity=0.001 Sum_probs=69.7
Q ss_pred ceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEE--eCC-CCCceEEEeee--CCEEEEEeC---------
Q psy16020 17 TALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT--LGL-PHHSVRSLAAV--YNKVWCGYK--------- 80 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~--l~~-~~~pV~~m~~v--~~~Lw~g~~--------- 80 (151)
.+..|... ++++|++...+.|..|+... +. ...+. ... +....+.+++- +++||++..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~-g~-----~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEG-GH-----ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTC-EE-----CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCC-CE-----EEEecccCCCCcccccceEEEecCCCEEEEECCccccccccc
Confidence 46778776 57999997666677776431 11 11221 111 11224556664 468999862
Q ss_pred ----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020 81 ----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 81 ----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t 134 (151)
+.|+.+|++++++......- ...+.|+++++ .+|++-.....|..||..+
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~----~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLLKEL----HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEEEEE----SCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ceehcccCCCceEEEEeCCCCEEEEeccCC----ccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 47999999988876544322 24566788855 4798988889999999874
No 243
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.51 E-value=0.92 Score=41.77 Aligned_cols=121 Identities=16% Similarity=0.185 Sum_probs=78.8
Q ss_pred CCCceeeeeeCCC--ceeeeEEe------CCeEEEEe----------cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCce
Q psy16020 4 PHPTPYPLNKILD--TALPPVHV------QGRVVCAL----------ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV 65 (151)
Q Consensus 4 ~~~~~l~~i~l~~--~V~~i~~~------~~~v~vgl----------~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV 65 (151)
.+++.+.++.|.+ .++|+... +.++.||+ ..|.|.+|+.. ++ .++..+..++ +.||
T Consensus 815 ~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~-~~--kL~lv~~~~v---~g~v 888 (1158)
T 3ei3_A 815 HTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS-DG--KLQTVAEKEV---KGAV 888 (1158)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE-TT--EEEEEEEEEE---SSCE
T ss_pred CCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE-CC--EEEEEEEEEc---CCcC
Confidence 3567888888883 78888753 35788888 45889999885 11 2222222333 3899
Q ss_pred EEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEe--cCCCCCceeEEEEeCCEEEEEEcCCCe-EEEEeCC
Q psy16020 66 RSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDA--HPRRESQVRQMTWAGDGVWVSIRLDST-LRMYNAH 133 (151)
Q Consensus 66 ~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~--h~~~~~~I~~m~~~~~~vwis~~~d~~-l~lwd~~ 133 (151)
++|...+++|-+|.|++|+++|....+.++ .+. +.. -.+..+...++-+.++--..+. +--|+..
T Consensus 889 ~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~--i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~ 956 (1158)
T 3ei3_A 889 YSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNN--IMALYLKTKGDFILVGDLMRSVLLLAYKPM 956 (1158)
T ss_dssp EEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEECCC--SCEEEEEEETTEEEEEESSBCEEEEEEETT
T ss_pred EEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeecccc--EEEEEEeccCCEEEEEEhhheEEEEEEEcC
Confidence 999999999999999999999987544333 222 211 1234666667777666555544 3335554
No 244
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.45 E-value=0.68 Score=37.29 Aligned_cols=116 Identities=14% Similarity=0.215 Sum_probs=81.5
Q ss_pred eEEEEecCCcEEEEEcC--CCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeCC-eEEEEeCC-----CCcEEEEE
Q psy16020 27 RVVCALADGSVAIFRRG--PDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKN-KIHVVDPK-----SLVVLKSF 97 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~--~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~n-~I~vid~~-----t~~i~~~~ 97 (151)
++|+.-.+|.+..|+.. .+|....+....++++. +|=-|.+= ..++||+|-.+ .|..||++ ++++...+
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~ 222 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA 222 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe
Confidence 59999999999999884 33434444456678876 55444443 24899999975 69999966 46666655
Q ss_pred EecCCCCCceeEEEEe----CCE-EEEEEcCCCeEEEEeCC-ccceeeeEeCCc
Q psy16020 98 DAHPRRESQVRQMTWA----GDG-VWVSIRLDSTLRMYNAH-TYQHLQDVDIEP 145 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~----~~~-vwis~~~d~~l~lwd~~-t~~~l~~idi~~ 145 (151)
.. ..-..-+..|+.. +.+ +++|...++..-+||.+ +++.+..|.|..
T Consensus 223 ~~-g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig~ 275 (355)
T 3amr_A 223 DG-RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRITD 275 (355)
T ss_dssp SS-SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEECC
T ss_pred cC-CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEecC
Confidence 31 1112257888775 234 67888889999999997 899999986543
No 245
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.42 E-value=0.67 Score=35.78 Aligned_cols=111 Identities=14% Similarity=0.077 Sum_probs=70.6
Q ss_pred ceeeeEEeC-CeEEEEec------CCcEEEEEcCCCCCCCCCcceEEEeCC----CCCceEEEeee--CCEEEEEe----
Q psy16020 17 TALPPVHVQ-GRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGL----PHHSVRSLAAV--YNKVWCGY---- 79 (151)
Q Consensus 17 ~V~~i~~~~-~~v~vgl~------nG~l~v~~~~~~~~wd~~~~~~i~l~~----~~~pV~~m~~v--~~~Lw~g~---- 79 (151)
.+..|...+ +++|+.-. ++.|.+|+...+ +..+.+.+.. +....+.+++- ++.+|++.
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg-----~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN-----QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT-----EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC-----eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 677887764 78998753 378999986421 1223445532 11345778886 47899884
Q ss_pred -CCeEEEEeCCCCcEEEEEEecCCC--------------------------CCceeEEEEeCCE--EEEEEcCCCeEEEE
Q psy16020 80 -KNKIHVVDPKSLVVLKSFDAHPRR--------------------------ESQVRQMTWAGDG--VWVSIRLDSTLRMY 130 (151)
Q Consensus 80 -~n~I~vid~~t~~i~~~~~~h~~~--------------------------~~~I~~m~~~~~~--vwis~~~d~~l~lw 130 (151)
.+.|+++|.++++..+.+..|... ...++.|++++++ ++++-..+..|..+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 368999999999988877654210 0125777887654 55555555566666
Q ss_pred eC
Q psy16020 131 NA 132 (151)
Q Consensus 131 d~ 132 (151)
|+
T Consensus 223 ~~ 224 (343)
T 2qe8_A 223 KS 224 (343)
T ss_dssp EH
T ss_pred EH
Confidence 54
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.41 E-value=0.62 Score=35.43 Aligned_cols=108 Identities=8% Similarity=0.057 Sum_probs=69.2
Q ss_pred eeEEeC--CeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC------------CeE
Q psy16020 20 PPVHVQ--GRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK------------NKI 83 (151)
Q Consensus 20 ~i~~~~--~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~------------n~I 83 (151)
.|...+ +.+|++ ..++.|.+|+..... ......+.- .+ . -..|++- ++.||++.. +.|
T Consensus 189 gia~~~dg~~lyv~d~~~~~I~~~~~~~~~---~~~~~~~~~-~~-g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEFLSHQIVKYWLEGPK---KGTAEVLVK-IP-N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEESSSTT---TTCEEEEEE-CS-S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCCCc---CCccceEEe-CC-C-CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 445543 369988 456899999875211 112222221 11 3 3556654 467999983 469
Q ss_pred EEEeCCCCcEEEEEEecCCC-CCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020 84 HVVDPKSLVVLKSFDAHPRR-ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 84 ~vid~~t~~i~~~~~~h~~~-~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t 134 (151)
+.+|++ +++...+...... ...+..+...+..+|++......|..++...
T Consensus 263 ~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 263 IKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred EEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence 999985 8888888754211 2457777777888999999999999998763
No 247
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=95.08 E-value=0.038 Score=50.52 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=31.0
Q ss_pred eeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020 107 VRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 146 (151)
Q Consensus 107 I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~ 146 (151)
+.+++.. .....++..+|.+||+|+..|++++++.|+...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~~ 280 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQT 280 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCCS
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhhc
Confidence 3333333 445567999999999999999999999998643
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.72 E-value=0.2 Score=43.07 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=71.4
Q ss_pred CcEEEEEcCCCCCCCCCc-ceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCCCCc------------EEEEE
Q psy16020 35 GSVAIFRRGPDGQWDLSK-YHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLV------------VLKSF 97 (151)
Q Consensus 35 G~l~v~~~~~~~~wd~~~-~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~t~~------------i~~~~ 97 (151)
|.|.|.+..... -.. ...++++. +|- ++.+. ++.++++.. ++|.|||.++++ +..+.
T Consensus 254 ~~V~VID~~~~~---~~~~~~~Ipvg~--~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 254 NGVKVVDGRKEA---SSLFTRYIPIAN--NPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp TTEEEEECSGGG---CCSSEEEEEEES--SCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred CcEEEEeCcccC---CceeEEEEecCC--Cce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence 458888865310 012 35677775 554 44554 356888884 799999999874 55555
Q ss_pred EecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc----------cceeeeEeCC
Q psy16020 98 DAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT----------YQHLQDVDIE 144 (151)
Q Consensus 98 ~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t----------~~~l~~idi~ 144 (151)
+.- ....+++++++|- |++.--|+.|-.||..+ .+.++++++.
T Consensus 328 ~vG----~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 328 ELG----LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp BCC----SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred CCC----CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 543 4788999997654 78999999999999988 6788888874
No 249
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.65 E-value=0.011 Score=47.48 Aligned_cols=94 Identities=9% Similarity=0.072 Sum_probs=60.7
Q ss_pred CCCCCceeeeeeCC--CceeeeEE----eCCeEEEE--ecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEE---E
Q psy16020 2 EYPHPTPYPLNKIL--DTALPPVH----VQGRVVCA--LADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRS---L 68 (151)
Q Consensus 2 ~~~~~~~l~~i~l~--~~V~~i~~----~~~~v~vg--l~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~---m 68 (151)
+..+.+.+|+++.+ .+++.... .++.+|++ ..||.|..|+... |.|. ..+.+.. ..+|++. .
T Consensus 26 d~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~----~~~~~~~lv~~SP~~~~~~p 100 (339)
T 2be1_A 26 DRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQK----LPLSIRQLVSTSPLHLKTNI 100 (339)
T ss_dssp ETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEE----EEEEHHHHHTTCSEEEECC-
T ss_pred ECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEE----eeeccccceeccccccCCCc
Confidence 35678899999887 44443321 13467777 5899999998743 4321 1222211 1256553 1
Q ss_pred ee-------eCCEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020 69 AA-------VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 69 ~~-------v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h 100 (151)
.+ .++.+++|+. ++++.+|+.||+++.++...
T Consensus 101 vv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 101 VVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp ---------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 11 4678999996 59999999999999998743
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.62 E-value=0.56 Score=40.30 Aligned_cols=121 Identities=12% Similarity=0.017 Sum_probs=80.1
Q ss_pred CCCceeeeeeCC--CceeeeEE----eCCeEEEEe------------------cCCcEEEEEcCCCCCCCCCcceEEEeC
Q psy16020 4 PHPTPYPLNKIL--DTALPPVH----VQGRVVCAL------------------ADGSVAIFRRGPDGQWDLSKYHTVTLG 59 (151)
Q Consensus 4 ~~~~~l~~i~l~--~~V~~i~~----~~~~v~vgl------------------~nG~l~v~~~~~~~~wd~~~~~~i~l~ 59 (151)
.+.+|.+.|.+| ..+..+.. ..++||++. -+|.+.+.+... .+....+.++
T Consensus 120 ~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t-----~~v~~qI~Vg 194 (595)
T 1fwx_A 120 DVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK-----WEVAWQVLVS 194 (595)
T ss_dssp TTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT-----TEEEEEEEES
T ss_pred CCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCC-----CeEEEEEEeC
Confidence 455777877776 56777764 457899994 345788877642 1233445554
Q ss_pred CCCCceEEEee--eCCEEEEEeC---------------------------------------CeEEEEeCCC--CcE-EE
Q psy16020 60 LPHHSVRSLAA--VYNKVWCGYK---------------------------------------NKIHVVDPKS--LVV-LK 95 (151)
Q Consensus 60 ~~~~pV~~m~~--v~~~Lw~g~~---------------------------------------n~I~vid~~t--~~i-~~ 95 (151)
. .| .-|.. -++.+|+.|. |.|.|||+.+ ++. .+
T Consensus 195 g--~p-d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~ 271 (595)
T 1fwx_A 195 G--NL-DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTR 271 (595)
T ss_dssp S--CC-CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEE
T ss_pred C--Cc-cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEE
Confidence 3 22 11222 1345555552 3499999998 666 77
Q ss_pred EEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccc
Q psy16020 96 SFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~ 136 (151)
.+..-. +.+.+..+++| ++++...+++|.++|..+.+
T Consensus 272 ~Ipvg~----~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~ 310 (595)
T 1fwx_A 272 YIPIAN----NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFD 310 (595)
T ss_dssp EEEEES----SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHH
T ss_pred EEecCC----CceEEEEcCCCCEEEEeCCCCCeEEEEECcccc
Confidence 777653 67888888655 68888999999999999874
No 251
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.52 E-value=1.2 Score=35.73 Aligned_cols=110 Identities=12% Similarity=0.061 Sum_probs=66.8
Q ss_pred ceeeeEE-eCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--C-eEEEEeCC
Q psy16020 17 TALPPVH-VQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--N-KIHVVDPK 89 (151)
Q Consensus 17 ~V~~i~~-~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n-~I~vid~~ 89 (151)
.+..|.. .++++|++-. ++.|.+|+... + ....+.-.. ..|- +++. ++.||++.. + +|+++|..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~-g-----~~~~~~~~~-~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDD-N-----KVTTVHPGF-KGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTT-T-----EEEEEEETC-CBCB--CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCC-C-----EEEEeeccC-CCCc--eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 4455555 3567888865 47788887642 1 111221111 1343 5554 467888874 3 89999998
Q ss_pred CCcEEEEEEec-CCCCCceeEEEEeC-C-EEEEEEcCCCeEEEEeCCccc
Q psy16020 90 SLVVLKSFDAH-PRRESQVRQMTWAG-D-GVWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 90 t~~i~~~~~~h-~~~~~~I~~m~~~~-~-~vwis~~~d~~l~lwd~~t~~ 136 (151)
+....+.+... ......++.+++++ + .+|+ ...++.|+.||..+.+
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQE 251 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCC
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCC
Confidence 77655554211 11234678888886 4 4566 5668899999998654
No 252
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=94.19 E-value=0.027 Score=47.74 Aligned_cols=65 Identities=9% Similarity=0.057 Sum_probs=46.9
Q ss_pred CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEE-EcC---------CCeEEEEeCCccce
Q psy16020 73 NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVS-IRL---------DSTLRMYNAHTYQH 137 (151)
Q Consensus 73 ~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis-~~~---------d~~l~lwd~~t~~~ 137 (151)
+++..+. ++.|++||+.+++..+.+..|......+..+.++++|-++. .++ ++.|++||..+++.
T Consensus 27 g~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 27 QEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp SEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 4544443 56899999999998888876642112488999998776443 332 68999999998877
No 253
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.18 E-value=1.3 Score=33.16 Aligned_cols=123 Identities=12% Similarity=0.101 Sum_probs=72.5
Q ss_pred CceeeeeeCCCceeeeEEeCCeEEEEecC------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020 6 PTPYPLNKILDTALPPVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (151)
Q Consensus 6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~n------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~ 79 (151)
++.+.++..+-.-.+....++++|+..+. ..+.+|+.. ...|..- -++.. ...-.++...+++||+-.
T Consensus 93 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~~~----~~~p~-~r~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPN-IDQWSML----GDMQT-AREGAGLVVASGVIYCLG 166 (301)
T ss_dssp CEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETT-TTEEEEE----EECSS-CCBSCEEEEETTEEEEEC
T ss_pred eEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCC-CCeEEEC----CCCCC-CcccceEEEECCEEEEEC
Confidence 44555444443444455568888887642 357778764 3456321 01211 122235566789988764
Q ss_pred C-------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020 80 K-------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ 136 (151)
Q Consensus 80 ~-------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~ 136 (151)
| +.++++|+++.+-... ..-+ ....-..++..++.+++.++.+ ..+.+||..+.+
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~-~~~p-~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNV-TPMA-TKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEE-CCCS-SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCcEEeC-CCCC-cccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 3 5799999998765443 2111 1223445666688888888764 568999998654
No 254
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.17 E-value=0.8 Score=38.17 Aligned_cols=74 Identities=14% Similarity=0.061 Sum_probs=48.0
Q ss_pred CceEEEeee--CCEEEEEe-C--------CeEEEEeCC-CC---cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCC-
Q psy16020 63 HSVRSLAAV--YNKVWCGY-K--------NKIHVVDPK-SL---VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDS- 125 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~-~--------n~I~vid~~-t~---~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~- 125 (151)
..+....+. ++.|..++ . +.|+++|++ ++ +..+-...|. ..+..+.++++| ++++.++++
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~---~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE---EAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT---BCEEEEEECTTSCEEEEECTTSS
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC---ceEcceEECCCCeEEEEECCCCC
Confidence 455555554 35676554 2 379999999 67 4444444443 378888988655 566777777
Q ss_pred -eEEEEeCCccceee
Q psy16020 126 -TLRMYNAHTYQHLQ 139 (151)
Q Consensus 126 -~l~lwd~~t~~~l~ 139 (151)
.|.+||..+.+..+
T Consensus 265 ~~l~~~~~~~~~~~~ 279 (662)
T 3azo_A 265 WNLHRVDPATGAATQ 279 (662)
T ss_dssp CEEEEECTTTCCEEE
T ss_pred eEEEEEECCCCceee
Confidence 78888876665443
No 255
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=94.16 E-value=0.097 Score=44.99 Aligned_cols=73 Identities=14% Similarity=0.157 Sum_probs=49.6
Q ss_pred EEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCce--eEEEEeCCEEEEEEcCC----------CeEEEEeCC
Q psy16020 67 SLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQV--RQMTWAGDGVWVSIRLD----------STLRMYNAH 133 (151)
Q Consensus 67 ~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I--~~m~~~~~~vwis~~~d----------~~l~lwd~~ 133 (151)
++... ++++.+..++.|++||.+|++....+..|+.....+ ....++++|-++....+ +.+.+||..
T Consensus 21 ~~~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~ 100 (740)
T 4a5s_A 21 SLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN 100 (740)
T ss_dssp CEEECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECC
Confidence 44444 345444347899999999999988888886433333 33677877764444433 678899999
Q ss_pred ccceee
Q psy16020 134 TYQHLQ 139 (151)
Q Consensus 134 t~~~l~ 139 (151)
+++..+
T Consensus 101 ~~~~~~ 106 (740)
T 4a5s_A 101 KRQLIT 106 (740)
T ss_dssp TTEECC
T ss_pred CCcEEE
Confidence 987654
No 256
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=93.75 E-value=1.2 Score=33.58 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=43.1
Q ss_pred ceEEEeeeCCEEEEEe-C--------CeEEEEeCCCCcEEEEEEecCCCCCceeE-EEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020 64 SVRSLAAVYNKVWCGY-K--------NKIHVVDPKSLVVLKSFDAHPRRESQVRQ-MTWAGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 64 pV~~m~~v~~~Lw~g~-~--------n~I~vid~~t~~i~~~~~~h~~~~~~I~~-m~~~~~~vwis~~~d~~l~lwd~~ 133 (151)
++.....-++.|+.+. . ..|+++| +++..+-...|. ..+.. +.++ ++++++...++..+|| ..
T Consensus 218 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~---~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 218 SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVD---RGVGQAKIKD-GKVYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCC---SEEEEEEEET-TEEEEEEEETTEEEEE-EE
T ss_pred ceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCC---cccCCccEEc-CcEEEEEecCCcEEEE-Ec
Confidence 3444433345565554 2 3799999 666544333332 36775 7787 7788888899999999 76
Q ss_pred ccce
Q psy16020 134 TYQH 137 (151)
Q Consensus 134 t~~~ 137 (151)
+++.
T Consensus 291 ~g~~ 294 (347)
T 2gop_A 291 DGEI 294 (347)
T ss_dssp SSSE
T ss_pred CCce
Confidence 5544
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.64 E-value=1.5 Score=32.17 Aligned_cols=102 Identities=7% Similarity=-0.034 Sum_probs=63.1
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPR 102 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~ 102 (151)
+++.+- ++.|..++.+....-..+....+.... .....+++- +++||++.. ++|+++|+++......+..
T Consensus 3 ~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~--~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--- 76 (267)
T 1npe_A 3 HLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPA--KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ--- 76 (267)
T ss_dssp EEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEE--EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT---
T ss_pred EEEEEc-CCeEEEEEecCcccccccceeeecCCC--CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC---
Confidence 466665 457777776421100000111222222 345677775 478998873 6899999987765443321
Q ss_pred CCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCc
Q psy16020 103 RESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 103 ~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t 134 (151)
.....+.|+++ +..+|++-...+.|..+|...
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 12468889987 457888998899999999864
No 258
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.64 E-value=1.1 Score=33.85 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=61.9
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCC-C
Q psy16020 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPR-R 103 (151)
Q Consensus 28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~-~ 103 (151)
+|++..+|.|..|+.. |. ...+.... ..+..+++- +++||++.. +.|+.+|.+ ++...-...... .
T Consensus 60 ~~~d~~~~~i~~~~~~--g~-----~~~~~~~~--~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~ 129 (305)
T 3dr2_A 60 VWSDLVGRRVLGWRED--GT-----VDVLLDAT--AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKR 129 (305)
T ss_dssp EEEETTTTEEEEEETT--SC-----EEEEEESC--SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEE
T ss_pred EEEECCCCEEEEEeCC--CC-----EEEEeCCC--CccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCc
Confidence 6777778888888652 32 22333333 556777775 477998873 589999986 665433221111 1
Q ss_pred CCceeEEEEeCCE-EEEEE----c-------------CCCeEEEEeCCccce
Q psy16020 104 ESQVRQMTWAGDG-VWVSI----R-------------LDSTLRMYNAHTYQH 137 (151)
Q Consensus 104 ~~~I~~m~~~~~~-vwis~----~-------------~d~~l~lwd~~t~~~ 137 (151)
...++.++++++| +|++- . ..+.|..||..+.+.
T Consensus 130 ~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~ 181 (305)
T 3dr2_A 130 LNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL 181 (305)
T ss_dssp CSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred cCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence 2357788888665 58762 1 136788999866543
No 259
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.57 E-value=1.6 Score=33.07 Aligned_cols=112 Identities=8% Similarity=0.037 Sum_probs=65.6
Q ss_pred ceeeeEEeCCeEEEEecC-------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------Ce
Q psy16020 17 TALPPVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NK 82 (151)
Q Consensus 17 ~V~~i~~~~~~v~vgl~n-------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------n~ 82 (151)
.-.+....++++|+-.+. ..+.+|+... ..|..-. ++.. ...-.+++..+++||+-.| +.
T Consensus 140 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~----~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 213 (315)
T 4asc_A 140 YGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK-FEWKELA----PMQT-ARSLFGATVHDGRIIVAAGVTDTGLTSS 213 (315)
T ss_dssp BSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTT-TEEEECC----CCSS-CCBSCEEEEETTEEEEEEEECSSSEEEE
T ss_pred cceeEEEECCEEEEEeCCCCCCcccceEEEEeCCC-CeEEECC----CCCC-chhceEEEEECCEEEEEeccCCCCccce
Confidence 334455578888887754 3578887642 4563211 1111 1222456667889886543 36
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC--------------CeEEEEeCCccc
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD--------------STLRMYNAHTYQ 136 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d--------------~~l~lwd~~t~~ 136 (151)
++++|+++.+-... ..-+ ....-..++..++.+++.++.+ +.+..||.++.+
T Consensus 214 ~~~yd~~~~~W~~~-~~~p-~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 214 AEVYSITDNKWAPF-EAFP-QERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEETTTTEEEEE-CCCS-SCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEEEECCCCeEEEC-CCCC-CcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 99999998764332 2111 1123345566688888887764 347889988654
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.47 E-value=1.9 Score=32.62 Aligned_cols=120 Identities=8% Similarity=0.003 Sum_probs=75.4
Q ss_pred CCCceeeeeeCCCceeeeEEe-CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe-
Q psy16020 4 PHPTPYPLNKILDTALPPVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY- 79 (151)
Q Consensus 4 ~~~~~l~~i~l~~~V~~i~~~-~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~- 79 (151)
+..+.+.++..+.....+... ++++|++- .+|.|..|+.. +. ....+..+ .....|++. +++||++.
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~--g~----~~~~~~~~---~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPD--GN----QQIHATVE---GKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--CC----EEEEEECS---SEEEEEEECTTSCEEEEEE
T ss_pred CCceEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCC--Cc----eEEEEeCC---CCceeEEEcCCCcEEEEec
Confidence 345566777666777788774 45788886 67888887643 31 11233443 345677775 46799987
Q ss_pred -CC--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCc
Q psy16020 80 -KN--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 80 -~n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t 134 (151)
.+ +|+.+|..+++++..... .. ......++.. +..++++-..++.|..+|..+
T Consensus 91 ~~~~~~v~~~d~~~g~~~~~~~~-~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 91 NADSIPVVSLVKSDGTVETLLTL-PD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEEC-TT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred cCCcceEEEEcCCCCeEEEEEeC-CC-ccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 22 499999999987654442 21 1233444333 334577766788888888765
No 261
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.32 E-value=1.9 Score=32.22 Aligned_cols=118 Identities=10% Similarity=0.072 Sum_probs=67.6
Q ss_pred eeeeeeCCCceeeeEEeCCeEEEEec------CCcEEEEEcCCCCCCCCCcceEEEeCCCCCc--eEEEeeeCCEEEEEe
Q psy16020 8 PYPLNKILDTALPPVHVQGRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHS--VRSLAAVYNKVWCGY 79 (151)
Q Consensus 8 ~l~~i~l~~~V~~i~~~~~~v~vgl~------nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~p--V~~m~~v~~~Lw~g~ 79 (151)
.+..+..+-.-.+....++++|+-.+ ...+.+|+... +.|. .+.....| -.+++..+++||+-.
T Consensus 142 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~-------~~~~~p~~r~~~~~~~~~~~i~v~G 213 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHT-GHWT-------NVTPMATKRSGAGVALLNDHIYVVG 213 (301)
T ss_dssp EEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEEE-------EECCCSSCCBSCEEEEETTEEEEEC
T ss_pred ECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCC-CcEE-------eCCCCCcccccceEEEECCEEEEEe
Confidence 33333333333344455778887653 24577777642 4553 12221122 235666788988765
Q ss_pred C-------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCcc
Q psy16020 80 K-------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY 135 (151)
Q Consensus 80 ~-------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~ 135 (151)
| +.++++|+++.+-... ..-+. ...-..++..++.+++.++.+ ..+..||.++.
T Consensus 214 G~~~~~~~~~v~~yd~~~~~W~~~-~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDSWTTV-TSMTT-PRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEEE-CCCSS-CCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCCCcccceEEEEeCCCCcEEEC-CCCCC-cccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 3 4699999998875433 21111 123345556688888887765 56889998764
No 262
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=93.30 E-value=3 Score=35.41 Aligned_cols=107 Identities=10% Similarity=0.021 Sum_probs=65.6
Q ss_pred eCCeEEEEec----CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CC--eEEEEeCCCCcEE
Q psy16020 24 VQGRVVCALA----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KN--KIHVVDPKSLVVL 94 (151)
Q Consensus 24 ~~~~v~vgl~----nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n--~I~vid~~t~~i~ 94 (151)
.++++|+... ++.|.+++....+ .+..+.+.-......+..+... +++|.+.. ++ +|+++|..+++..
T Consensus 296 dg~~l~~~s~~~~~~~~l~~~d~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~ 372 (710)
T 2xdw_A 296 EGTVFTFKTNRHSPNYRLINIDFTDPE---ESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALL 372 (710)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCC---GGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCC---cccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEE
Confidence 4556665543 2357777654221 0011233222212368888887 67766655 23 6999999889888
Q ss_pred EEEEecCCCCCceeEEEEeCC--EEEEEEc---CCCeEEEEeCCccc
Q psy16020 95 KSFDAHPRRESQVRQMTWAGD--GVWVSIR---LDSTLRMYNAHTYQ 136 (151)
Q Consensus 95 ~~~~~h~~~~~~I~~m~~~~~--~vwis~~---~d~~l~lwd~~t~~ 136 (151)
+++..+. ..|..+..+++ .++++.+ ..+.|.+||..+.+
T Consensus 373 ~~l~~~~---~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 373 KIFPLEV---GSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEECCCS---SEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EecCCCC---ceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8887663 46777776543 4554444 45789999998866
No 263
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=93.27 E-value=0.38 Score=36.42 Aligned_cols=73 Identities=15% Similarity=0.254 Sum_probs=47.3
Q ss_pred ceEEEeee--CCEEEEEeC----C--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcC----------
Q psy16020 64 SVRSLAAV--YNKVWCGYK----N--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRL---------- 123 (151)
Q Consensus 64 pV~~m~~v--~~~Lw~g~~----n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~---------- 123 (151)
.+.+..+. ++.|..++. + .|+++|+++++..+-...+ . +..+.++++| +.++..+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~----~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK----N-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES----E-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC----C-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 35555665 356665552 2 5999999998876655533 2 8888888665 3333222
Q ss_pred ----------------CCeEEEEeCCccceeeeE
Q psy16020 124 ----------------DSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 124 ----------------d~~l~lwd~~t~~~l~~i 141 (151)
...|.+||..+.+.++.+
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l 168 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF 168 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEE
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeee
Confidence 367999999988764444
No 264
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.16 E-value=1.6 Score=35.10 Aligned_cols=126 Identities=13% Similarity=0.095 Sum_probs=82.1
Q ss_pred CCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE-Ee--CCCCCceEEEeee-C----CE
Q psy16020 5 HPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TL--GLPHHSVRSLAAV-Y----NK 74 (151)
Q Consensus 5 ~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l--~~~~~pV~~m~~v-~----~~ 74 (151)
+.+.++++++++++--+...+ ++||+|-.+--|..|+-.+.+. .....+ .+ +....-+.-|++. . +.
T Consensus 169 ~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~---~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gy 245 (355)
T 3amr_A 169 SGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGG---SNGTVIDRADGRHLTRDIEGLTIYYAADGKGY 245 (355)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSC---SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEE
T ss_pred cceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCC---CCceEEEEecCCccccCcceEEEEecCCCCEE
Confidence 457789999999999888864 7999999986666665433221 122333 23 2233568888885 2 36
Q ss_pred EEEEe-C-CeEEEEeCC-CCcEEEEEEecCCC-------CCc--eeEEEEe---CCEEEEEEcC---------CCeEEEE
Q psy16020 75 VWCGY-K-NKIHVVDPK-SLVVLKSFDAHPRR-------ESQ--VRQMTWA---GDGVWVSIRL---------DSTLRMY 130 (151)
Q Consensus 75 Lw~g~-~-n~I~vid~~-t~~i~~~~~~h~~~-------~~~--I~~m~~~---~~~vwis~~~---------d~~l~lw 130 (151)
|.++| | |+..|||.+ +.+...+|..-... -.. |...... +.|++++-+. ....++.
T Consensus 246 LivSsQG~~s~~Vydr~~~~~~vg~f~Ig~~~~idgv~eTDG~~v~~~~lG~~fP~Gl~V~qDg~n~~~~~~~~qnFk~v 325 (355)
T 3amr_A 246 LMASSQGNSSYAIYDRQGKNKYVADFRITDGPETDGTSDTDGIDVLGFGLGPEYPFGIFVAQDGENIDHGQKANQNFKIV 325 (355)
T ss_dssp EEEEEGGGTEEEEEESSTTCCEEEEEEECCCSSSCCCCSCCCEEEECSCCSTTCTTCEEEEEESSCEETTEECCCEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCCcEEEEEEecCCCCceeeeccCcceEEccccCCCCCCcEEEEecCCcccCCCCcCceEEEE
Confidence 99999 3 589999997 89999999733221 012 2222221 4588888776 4566776
Q ss_pred eCC
Q psy16020 131 NAH 133 (151)
Q Consensus 131 d~~ 133 (151)
+.+
T Consensus 326 ~w~ 328 (355)
T 3amr_A 326 PWE 328 (355)
T ss_dssp EHH
T ss_pred EHH
Confidence 654
No 265
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.05 E-value=0.22 Score=38.32 Aligned_cols=67 Identities=10% Similarity=-0.018 Sum_probs=46.7
Q ss_pred CCEEEEEeC--C--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 72 YNKVWCGYK--N--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 72 ~~~Lw~g~~--n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
++.|..++. + +|+++|+++++..+....+.. .+....++++|- .+..+.+..|++||..+.+.....
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~---~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD---NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY 118 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB---CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC---CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee
Confidence 456666653 3 599999999998777665543 333455776653 455666789999999998766544
No 266
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.03 E-value=2.1 Score=32.05 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=64.5
Q ss_pred eeeeEEeCCeEEEEec----------CCcEEEEEcCCCCCCCCCcceEEEeCCCC--CceEEEeeeCCEEEEEeC-----
Q psy16020 18 ALPPVHVQGRVVCALA----------DGSVAIFRRGPDGQWDLSKYHTVTLGLPH--HSVRSLAAVYNKVWCGYK----- 80 (151)
Q Consensus 18 V~~i~~~~~~v~vgl~----------nG~l~v~~~~~~~~wd~~~~~~i~l~~~~--~pV~~m~~v~~~Lw~g~~----- 80 (151)
-.+....++++|+..+ ...+.+|+... ..|. .+.... ..-.++...+++||+-.|
T Consensus 142 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 213 (306)
T 3ii7_A 142 SHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT-ETWT-------ELCPMIEARKNHGLVFVKDKIFAVGGQNGLG 213 (306)
T ss_dssp SCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTT-TEEE-------EECCCSSCCBSCEEEEETTEEEEECCEETTE
T ss_pred eeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCC-CeEE-------ECCCccchhhcceEEEECCEEEEEeCCCCCC
Confidence 3344556788888664 34577777643 3453 122211 222356667889887654
Q ss_pred --CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCcc
Q psy16020 81 --NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY 135 (151)
Q Consensus 81 --n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~ 135 (151)
+.++++|+++.+-... ..-+. ...-..++..++.+++.++.+ ..+..||..+.
T Consensus 214 ~~~~~~~yd~~~~~W~~~-~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 214 GLDNVEYYDIKLNEWKMV-SPMPW-KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EBCCEEEEETTTTEEEEC-CCCSC-CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCceEEEeeCCCCcEEEC-CCCCC-CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 5699999998764322 21111 122344555588899888853 67899998874
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.00 E-value=2.4 Score=32.49 Aligned_cols=118 Identities=9% Similarity=-0.029 Sum_probs=75.2
Q ss_pred ceeeeEEe--CCeEEEEecC--CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020 17 TALPPVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP 88 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~n--G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~ 88 (151)
....|... ++++|++-.. +.|..++.+ |. ..+.+--..- .--+.|++- +++||.+.. ++|+++|.
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--G~----~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GV----DIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT--SC----CEEEEECSSC-SCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCC--CC----CeEEEEECCC-CCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 44566654 5678887643 667777643 32 2222211111 223566665 578988874 58999998
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.... +.+............|+..++.+|++-...+.|..+|..+++.+..|.
T Consensus 194 dg~~~-~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 194 NGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TSCSC-EEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCCce-EEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 75333 334322222345778888899998899999999999998887777663
No 268
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.90 E-value=2.3 Score=32.07 Aligned_cols=110 Identities=9% Similarity=0.059 Sum_probs=64.5
Q ss_pred eeeEEeCCeEEEEecC------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------CeEEE
Q psy16020 19 LPPVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NKIHV 85 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~n------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------n~I~v 85 (151)
.+....++++|+-.+. ..+.+|+.. ...|..-. .+.. ...-.++...+++||+-.| +.+++
T Consensus 162 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~----~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 235 (308)
T 1zgk_A 162 VGVAVLNRLLYAVGGFDGTNRLNSAECYYPE-RNEWRMIT----AMNT-IRSGAGVCVLHNCIYAAGGYDGQDQLNSVER 235 (308)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCEEEEETT-TTEEEECC----CCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEE
T ss_pred eEEEEECCEEEEEeCCCCCCcCceEEEEeCC-CCeEeeCC----CCCC-ccccceEEEECCEEEEEeCCCCCCccceEEE
Confidence 3444557888876542 357788764 34563211 1111 1222456667899887653 56999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcC-----CCeEEEEeCCccc
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRL-----DSTLRMYNAHTYQ 136 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~-----d~~l~lwd~~t~~ 136 (151)
+|+++.+-...-. -+ ....-..++..++.+++.++. ...+.+||.++.+
T Consensus 236 yd~~~~~W~~~~~-~p-~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 236 YDVETETWTFVAP-MK-HRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EETTTTEEEECCC-CS-SCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EeCCCCcEEECCC-CC-CCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 9999876443211 11 112334556668888888764 3568899988643
No 269
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.86 E-value=2.3 Score=31.85 Aligned_cols=109 Identities=13% Similarity=0.116 Sum_probs=64.6
Q ss_pred eeeeEEeCCeEEEEec--------CCcEEEEEcCCCCCCCCCcceEEEeCCC--CCceEEEeeeCCEEEEEeC-------
Q psy16020 18 ALPPVHVQGRVVCALA--------DGSVAIFRRGPDGQWDLSKYHTVTLGLP--HHSVRSLAAVYNKVWCGYK------- 80 (151)
Q Consensus 18 V~~i~~~~~~v~vgl~--------nG~l~v~~~~~~~~wd~~~~~~i~l~~~--~~pV~~m~~v~~~Lw~g~~------- 80 (151)
-.+....++++|+..+ ...+.+|+.. .+.|.. +... ...-.++...+++||+-.|
T Consensus 148 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~-~~~W~~-------~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 219 (302)
T 2xn4_A 148 SVGVGVVGGLLYAVGGYDVASRQCLSTVECYNAT-TNEWTY-------IAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVR 219 (302)
T ss_dssp SCEEEEETTEEEEECCEETTTTEECCCEEEEETT-TTEEEE-------ECCCSSCCBSCEEEEETTEEEEECCBSSSSBC
T ss_pred CceEEEECCEEEEEeCCCCCCCccccEEEEEeCC-CCcEEE-------CCCCccccccccEEEECCEEEEECCCCCCccc
Confidence 3445556788888653 2357777763 344532 1211 1222356667899887653
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ 136 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~ 136 (151)
+.++++|+++.+-..- ...+. ...-..++..++.+++.++.+ ..+.+||.++.+
T Consensus 220 ~~~~~yd~~~~~W~~~-~~~~~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 220 KSVEVYDPTTNAWRQV-ADMNM-CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCEEEEETTTTEEEEE-CCCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ceEEEEeCCCCCEeeC-CCCCC-ccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 4699999998764432 22211 122344556688888887754 358999998643
No 270
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.71 E-value=2.5 Score=31.98 Aligned_cols=109 Identities=13% Similarity=0.158 Sum_probs=63.6
Q ss_pred eeEEeCCeEEEEecC-------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------CeEEE
Q psy16020 20 PPVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NKIHV 85 (151)
Q Consensus 20 ~i~~~~~~v~vgl~n-------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------n~I~v 85 (151)
+....++++|+-.+. ..+.+|+... ..|..-. .+.. ...-.+++..+++||+-.| +.+++
T Consensus 153 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~----~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 226 (318)
T 2woz_A 153 NVISHNGMIYCLGGKTDDKKCTNRVFIYNPKK-GDWKDLA----PMKT-PRSMFGVAIHKGKIVIAGGVTEDGLSASVEA 226 (318)
T ss_dssp EEEEETTEEEEECCEESSSCBCCCEEEEETTT-TEEEEEC----CCSS-CCBSCEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCEEEEEcCCCCCCCccceEEEEcCCC-CEEEECC----CCCC-CcccceEEEECCEEEEEcCcCCCCccceEEE
Confidence 344467888876542 2477887643 4463211 1111 1222366677899886543 46899
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC--------------CeEEEEeCCccc
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD--------------STLRMYNAHTYQ 136 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d--------------~~l~lwd~~t~~ 136 (151)
+|+++.+-... ..-+. ...-+.++..++.+++.++.+ ..+..||..+.+
T Consensus 227 yd~~~~~W~~~-~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 227 FDLKTNKWEVM-TEFPQ-ERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EETTTCCEEEC-CCCSS-CCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EECCCCeEEEC-CCCCC-cccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 99998764332 21111 123345666788888877653 458889988744
No 271
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.69 E-value=2.5 Score=31.90 Aligned_cols=110 Identities=9% Similarity=0.099 Sum_probs=64.1
Q ss_pred eeeEEeCCeEEEEecC----------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------C
Q psy16020 19 LPPVHVQGRVVCALAD----------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------N 81 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~n----------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------n 81 (151)
.++...++++|+-.+. ..+.+|+... ..|..-. ++..+ ..-.++...+++||+-.| +
T Consensus 64 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~-~~W~~~~----~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~ 137 (308)
T 1zgk_A 64 LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT-NQWSPCA----PMSVP-RNRIGVGVIDGHIYAVGGSHGCIHHN 137 (308)
T ss_dssp CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTT-TEEEECC----CCSSC-CBTCEEEEETTEEEEECCEETTEECC
T ss_pred ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCC-CeEeECC----CCCcC-ccccEEEEECCEEEEEcCCCCCcccc
Confidence 3445567888876653 3577777542 3453211 11111 222455667899887654 5
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ 136 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~ 136 (151)
.++++|+++.+-.+.-.. + ....-+.++..++.+++.++.+ ..+..||..+.+
T Consensus 138 ~~~~yd~~~~~W~~~~~~-p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 138 SVERYEPERDEWHLVAPM-L-TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp CEEEEETTTTEEEECCCC-S-SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred cEEEECCCCCeEeECCCC-C-ccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 799999998764432111 1 1123345555688888887654 568889887643
No 272
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.48 E-value=4.4 Score=34.29 Aligned_cols=78 Identities=13% Similarity=0.130 Sum_probs=51.3
Q ss_pred ceEEEeeeCCEEEEEeC-----CeEEEEeCCCCcE--EEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC-cc
Q psy16020 64 SVRSLAAVYNKVWCGYK-----NKIHVVDPKSLVV--LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH-TY 135 (151)
Q Consensus 64 pV~~m~~v~~~Lw~g~~-----n~I~vid~~t~~i--~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~-t~ 135 (151)
.+......++.+++.+. .+|+++|.++++. .+.+..|. ....|..+..+++.+.++.++++..+||... +.
T Consensus 273 ~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 273 AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-SSASLLSVSIVGGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-SSCEEEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-CCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence 33343334544777663 4899999988763 23444442 1346888888888899999999998888654 35
Q ss_pred ceeeeEe
Q psy16020 136 QHLQDVD 142 (151)
Q Consensus 136 ~~l~~id 142 (151)
+.++.+.
T Consensus 352 ~~~~~l~ 358 (695)
T 2bkl_A 352 KPVRTVQ 358 (695)
T ss_dssp CEEEECC
T ss_pred CeeEEec
Confidence 5555553
No 273
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.39 E-value=6.6 Score=36.13 Aligned_cols=136 Identities=8% Similarity=0.086 Sum_probs=83.6
Q ss_pred ceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC--C-eE
Q psy16020 7 TPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK--N-KI 83 (151)
Q Consensus 7 ~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~--n-~I 83 (151)
+.+++-.++++|++|...++++.+|. +.+|.+|++..+.. +. ....... .--+..+...++.+.+|.- + .+
T Consensus 877 ~lv~~~~v~g~v~al~~~~g~Lla~i-g~~l~vy~l~~~~~--L~--~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~ 950 (1158)
T 3ei3_A 877 QTVAEKEVKGAVYSMVEFNGKLLASI-NSTVRLYEWTTEKE--LR--TECNHYN-NIMALYLKTKGDFILVGDLMRSVLL 950 (1158)
T ss_dssp EEEEEEEESSCEEEEEEETTEEEEEE-TTEEEEEEECTTSC--EE--EEEEECC-CSCEEEEEEETTEEEEEESSBCEEE
T ss_pred EEEEEEEcCCcCEEEeeeCCEEEEEc-CCEEEEEECCCCce--EE--EEeeccc-cEEEEEEeccCCEEEEEEhhheEEE
Confidence 34566678899999999999999998 68999999864321 11 0111111 1112355556889998883 3 45
Q ss_pred EEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC----------ccceeeeEeCCcccccc
Q psy16020 84 HVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH----------TYQHLQDVDIEPYVSKM 150 (151)
Q Consensus 84 ~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~----------t~~~l~~idi~~~v~~~ 150 (151)
..|+.+..+.+- +.-+.. ...+++.....+.-++.+++++.|.+.... ..+...++.+-..+++|
T Consensus 951 ~~y~~~~~~L~~-~a~D~~-~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~ 1025 (1158)
T 3ei3_A 951 LAYKPMEGNFEE-IARDFN-PNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF 1025 (1158)
T ss_dssp EEEETTTTEEEE-EEECCS-CBCEEEEEEEETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEE
T ss_pred EEEEcCCCeEEE-EEeecc-cccEEEEEEEccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeE
Confidence 556666554332 222222 235777777656668888888888877432 23445555555555543
No 274
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.78 E-value=3.4 Score=31.44 Aligned_cols=52 Identities=13% Similarity=0.079 Sum_probs=36.8
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEE-EcC------CCeEEEEeCCccc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVS-IRL------DSTLRMYNAHTYQ 136 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis-~~~------d~~l~lwd~~t~~ 136 (151)
+.|+++|+++++...-.. +. ..+..+.+++ +|-++. .+. ...|.++|..+.+
T Consensus 168 ~~l~~~d~~~g~~~~l~~-~~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQ-EN---QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp EEEEEEETTTCCEEEEEE-ES---SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred ceEEEEECCCCceEEeec-CC---ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 579999999998765554 43 3688999998 776443 332 3478888877543
No 275
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=91.60 E-value=5.4 Score=33.37 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=66.7
Q ss_pred CCeEEEEecCC-------cEEEEEcCCCCCCCC-CcceEEEeCCCCCceEEEeee--CCEEEEEe-C-CeEEEEeCC---
Q psy16020 25 QGRVVCALADG-------SVAIFRRGPDGQWDL-SKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-K-NKIHVVDPK--- 89 (151)
Q Consensus 25 ~~~v~vgl~nG-------~l~v~~~~~~~~wd~-~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~-n~I~vid~~--- 89 (151)
.+++|++--++ .+.++++..+|.|.- .....+.-+. +|. .+++. ++.||++. + ++|+.+|++
T Consensus 204 G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~-giavdp~~g~LYvtd~~~g~V~r~d~~~~~ 280 (496)
T 3kya_A 204 AEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK--QCN-GATIHPINGELYFNSYEKGQVFRLDLVDYF 280 (496)
T ss_dssp TCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES--CCC-CEEECTTTCCEEEEETTTTEEEEECHHHHH
T ss_pred CCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC--Cce-EEEEcCCCCeEEEEECCCCEEEEEeccccc
Confidence 34699998766 277888777777742 1113444333 454 45554 46799887 3 589999998
Q ss_pred ----CCcE-----------EEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeC
Q psy16020 90 ----SLVV-----------LKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNA 132 (151)
Q Consensus 90 ----t~~i-----------~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~ 132 (151)
++++ .+.+-...+ ...-+.|+++++| ++++-.....|+.+|.
T Consensus 281 ~~~~tg~~~tp~~~~~~g~~~~l~~~~~-~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 281 KTIKNGGSWDPIVKNNPNTFKQLFTIAD-PSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp HHHHTTCCCCCBGGGCTTTEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccccCceeecccccccccccceeEecCC-CCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 6665 233322221 2346788888665 7999999999999554
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=91.46 E-value=4.3 Score=32.06 Aligned_cols=116 Identities=9% Similarity=-0.039 Sum_probs=73.1
Q ss_pred ceeeeEEe--CCeEEEEecC--CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020 17 TALPPVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP 88 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~n--G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~ 88 (151)
....|... ++++|++-.. +.|..++. +|. ....+--..- .--+.|++- +++||.+-. ++|+.+|.
T Consensus 203 ~P~giavdp~~g~ly~td~~~~~~I~r~~~--dG~----~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 203 KPRAIALHPMEGTIYWTDWGNTPRIEASSM--DGS----GRRIIADTHL-FWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEET--TSC----SCEEEECSSC-SCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred CCcEEEEEcCCCeEEEeccCCCCEEEEEeC--CCC----CcEEEEECCC-CCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 34555554 5678877643 45655554 332 2222211111 223566764 688988873 58999998
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.... +.+... .......|++.++.+|++-.....|..+|..+++..+.|.
T Consensus 276 dG~~~-~~~~~~--~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 276 DGSHR-KAVISQ--GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TSCSC-EEEECS--SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCee-EEEEEC--CCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 75333 333321 1346788888899999999999999999988887777774
No 277
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.43 E-value=2.4 Score=33.31 Aligned_cols=97 Identities=10% Similarity=0.084 Sum_probs=55.6
Q ss_pred CCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeCC-----eEEEEeCCCCcEEE
Q psy16020 25 QGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKN-----KIHVVDPKSLVVLK 95 (151)
Q Consensus 25 ~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~n-----~I~vid~~t~~i~~ 95 (151)
++.||+|..+| |.+++.... ..|.... ..+.. ..|++|++- ++.||+|... .|+..+ +.++--+
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~---~~~~~--~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~ 94 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRG---PVFLG--HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWT 94 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEE---EESTT--SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCE
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECC---ccCCC--CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCce
Confidence 56899999887 777765432 3674211 12333 789999985 5789999843 576653 3333222
Q ss_pred EEEec---C-C-------CCCceeEEEEe----CCEEEEEEcCCCeEE
Q psy16020 96 SFDAH---P-R-------RESQVRQMTWA----GDGVWVSIRLDSTLR 128 (151)
Q Consensus 96 ~~~~h---~-~-------~~~~I~~m~~~----~~~vwis~~~d~~l~ 128 (151)
.+... . . ....|..|... ++.+|+.....+..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~ 142 (394)
T 3b7f_A 95 EATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFR 142 (394)
T ss_dssp ECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEE
T ss_pred ECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEE
Confidence 22211 0 0 01257778776 456677665544443
No 278
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.17 E-value=5.7 Score=32.89 Aligned_cols=69 Identities=14% Similarity=0.034 Sum_probs=43.3
Q ss_pred eEEEeee-CCEEEE-EeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEE-EEeCCEEEEEE-cCCC--eEEEEeCCccc
Q psy16020 65 VRSLAAV-YNKVWC-GYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQM-TWAGDGVWVSI-RLDS--TLRMYNAHTYQ 136 (151)
Q Consensus 65 V~~m~~v-~~~Lw~-g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m-~~~~~~vwis~-~~d~--~l~lwd~~t~~ 136 (151)
++++.+. ++++++ +.. .+|+++|.++++ .+++..|. ..+..+ ..+++.++++. +.+. .|.++|..+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~---~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGKGAAVLGILDPESGE-LVDAAGPW---TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp CCSEEECTTSCEEEEEBSSSCEEEEEETTTTE-EEECCSSC---CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CceEeEeCCCEEEEEEEcCccEEEEEECCCCc-EEEecCCC---CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 5566665 455444 432 468888998887 46676664 367777 77788875444 4443 56666766655
Q ss_pred e
Q psy16020 137 H 137 (151)
Q Consensus 137 ~ 137 (151)
.
T Consensus 372 ~ 372 (662)
T 3azo_A 372 A 372 (662)
T ss_dssp E
T ss_pred e
Confidence 4
No 279
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.67 E-value=1.7 Score=33.44 Aligned_cols=111 Identities=12% Similarity=0.047 Sum_probs=64.4
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC--CCCCceEEEeee-CCEEEEEeC-CeEEEEeCCC
Q psy16020 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG--LPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKS 90 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~--~~~~pV~~m~~v-~~~Lw~g~~-n~I~vid~~t 90 (151)
..+..+.+. ++++|++..+|.+...+.+.+..|..- ... .....+.++.+. ++++|++.. +.|+ ...+.
T Consensus 205 ~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~Dg 278 (327)
T 2xbg_A 205 RRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGEL-----LSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQDG 278 (327)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCC-----BCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EESST
T ss_pred CccceeEECCCCCEEEEeCCceEEEecCCCCCeeEec-----cCCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeCCC
Confidence 456666653 567998888888665432334456421 111 011457788776 467888764 4564 34555
Q ss_pred CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeC
Q psy16020 91 LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132 (151)
Q Consensus 91 ~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~ 132 (151)
++.-..+.........+..+.+.+++.++..+.++.|.-++-
T Consensus 279 G~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 279 GQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp TSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 655444442211123577777765555667788888776654
No 280
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.29 E-value=4.5 Score=30.17 Aligned_cols=108 Identities=11% Similarity=0.111 Sum_probs=63.5
Q ss_pred eeeEEeCCeEEEEec-CC-----cEEEEEcCCCCCCCCCcceEEEeCCCC--CceEEEeeeCCEEEEEeC---------C
Q psy16020 19 LPPVHVQGRVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPH--HSVRSLAAVYNKVWCGYK---------N 81 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~-nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~--~pV~~m~~v~~~Lw~g~~---------n 81 (151)
.+....++++|+-.+ ++ ++-+|+.. ...|. .+.... ..-.+++..+++||+-.| +
T Consensus 102 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~-~~~W~-------~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 102 LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIK-SNEWF-------HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp CEEEEETTEEEEEEEECSSCEEEEEEEEETT-TTEEE-------EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred eEEEEECCEEEEEcCCCCCccCceEEEEeCC-CCeEe-------ecCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence 445556778777543 22 46677653 23453 122211 222355667899887543 4
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ 136 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~ 136 (151)
.++++|+++.+-...-. -+ ....-+.++..++.+++.++.+ ..+..||..+.+
T Consensus 174 ~~~~yd~~~~~W~~~~~-~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAE-MS-TRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp CEEEEETTTTEEEEECC-CS-SCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred EEEEEeCCCCcEEECCC-Cc-cccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 59999999876543311 11 1223456666788888887764 468899988643
No 281
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.87 E-value=5 Score=30.17 Aligned_cols=109 Identities=16% Similarity=0.120 Sum_probs=64.2
Q ss_pred eeeEEeCCeEEEEec----C-----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC--------C
Q psy16020 19 LPPVHVQGRVVCALA----D-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK--------N 81 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~----n-----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~--------n 81 (151)
.++...++++|+..+ + .++-+|+... +.|..-. ++.. ...-.+++..+++||+-.| +
T Consensus 92 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~-~~W~~~~----~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 165 (315)
T 4asc_A 92 FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS-FKWGESD----PLPY-VVYGHTVLSHMDLVYVIGGKGSDRKCLN 165 (315)
T ss_dssp CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTT-TEEEECC----CCSS-CCBSCEEEEETTEEEEECCBCTTSCBCC
T ss_pred eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCC-CcEeECC----CCCC-cccceeEEEECCEEEEEeCCCCCCcccc
Confidence 344556888888766 1 2477777642 3463211 1111 1222355667889886553 4
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCC-----eEEEEeCCcc
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS-----TLRMYNAHTY 135 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~-----~l~lwd~~t~ 135 (151)
.++++|+++.+-.+. ..-+ ....-+.++..++.+++.++.+. .+..||..+.
T Consensus 166 ~~~~yd~~~~~W~~~-~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 166 KMCVYDPKKFEWKEL-APMQ-TARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp CEEEEETTTTEEEEC-CCCS-SCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred eEEEEeCCCCeEEEC-CCCC-CchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 699999998764332 2111 12234556666888888887644 5888998864
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=89.82 E-value=5.3 Score=30.30 Aligned_cols=71 Identities=11% Similarity=0.154 Sum_probs=52.8
Q ss_pred CceEEEeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020 63 HSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 136 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~ 136 (151)
.-+..|++. +++||+..+ +.|+.+|+. +++++++.... ..-...+++.+++ +|++..++..+.+++..+..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g--~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF--VKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS--CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC--CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 458888887 478998663 589999998 99999986432 1245666666554 47888889999999876543
No 283
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=89.65 E-value=2.3 Score=33.87 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=53.1
Q ss_pred CCEEEEEe--CCeEEEEeCCCCcEEEEEEec----CCCCCceeEEEE---eCC-EEEEEEc-------------CCCeEE
Q psy16020 72 YNKVWCGY--KNKIHVVDPKSLVVLKSFDAH----PRRESQVRQMTW---AGD-GVWVSIR-------------LDSTLR 128 (151)
Q Consensus 72 ~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h----~~~~~~I~~m~~---~~~-~vwis~~-------------~d~~l~ 128 (151)
++++|+++ .++|+++|+.++..+...-.. -+....+..|.+ .+. .+|+... .++.|.
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~ 103 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFH 103 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEE
Confidence 48999999 579999999877655442212 122345788888 444 4687544 278899
Q ss_pred EEeCC---ccceeeeEeCCc
Q psy16020 129 MYNAH---TYQHLQDVDIEP 145 (151)
Q Consensus 129 lwd~~---t~~~l~~idi~~ 145 (151)
.||.. |.+.+..+|+++
T Consensus 104 ~~Dl~~~~tg~~~~~~dL~~ 123 (334)
T 2p9w_A 104 SFNLPLSENSKPVWSVNFEK 123 (334)
T ss_dssp EEESSCCTTCCCSEEEESHH
T ss_pred EEcCCcCCCCCEEEEecCcc
Confidence 99999 999999888754
No 284
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=89.63 E-value=5.7 Score=33.60 Aligned_cols=72 Identities=11% Similarity=0.064 Sum_probs=45.6
Q ss_pred CCceEEEeeeCCEEEEEe--CC--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEc---CCCeEEEEeC
Q psy16020 62 HHSVRSLAAVYNKVWCGY--KN--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIR---LDSTLRMYNA 132 (151)
Q Consensus 62 ~~pV~~m~~v~~~Lw~g~--~n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~---~d~~l~lwd~ 132 (151)
...+..+.+.+++|.+.. ++ +|+++|.. ++..+++..+. ...|..+..++ ..++++.+ ..+.|++||.
T Consensus 319 ~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 319 SASLLSVSIVGGHLSLEYLKDATSEVRVATLK-GKPVRTVQLPG--VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp SCEEEEEEEETTEEEEEEEETTEEEEEEEETT-CCEEEECCCSS--SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred CCeEEEEEEECCEEEEEEEECCEEEEEEEeCC-CCeeEEecCCC--CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 367888888888877665 23 68888864 55556665442 23555555443 34554443 4578999999
Q ss_pred Cccc
Q psy16020 133 HTYQ 136 (151)
Q Consensus 133 ~t~~ 136 (151)
.+.+
T Consensus 396 ~~g~ 399 (695)
T 2bkl_A 396 STGK 399 (695)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8765
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=89.60 E-value=5.7 Score=30.43 Aligned_cols=111 Identities=10% Similarity=0.054 Sum_probs=62.2
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-CeEEEEeCCCCcE
Q psy16020 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLVV 93 (151)
Q Consensus 16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~i 93 (151)
..+.+|.+. ++.+|++..+|.|. .+.+.+.+|..... ....+..+++.|.+.++++|++.. +.|+. ..+.++-
T Consensus 36 ~~~~~v~~~~~~~~~~~G~~g~i~-~s~DgG~tW~~~~~---~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVGVNATLM-ETRDGGQTWEPRTL---VLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SCEEEEEESSSSCEEEEETTTEEE-EESSTTSSCEECCC---CCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSS
T ss_pred CcEEEEEECCCCcEEEEcCCCeEE-EeCCCCCCCeECCC---CCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCC
Confidence 578888875 45788888888652 23333446743211 112224689999998889997653 45654 3444554
Q ss_pred EEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEe
Q psy16020 94 LKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYN 131 (151)
Q Consensus 94 ~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd 131 (151)
-+....-..-...+..+... +..+|+...+....+-.|
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~D 149 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKD 149 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESS
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcC
Confidence 33332211101245666654 455677666555555555
No 286
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=89.43 E-value=5.5 Score=29.99 Aligned_cols=108 Identities=8% Similarity=0.124 Sum_probs=62.1
Q ss_pred eeeEEeCCeEEEEecC--------CcEEEEEcCCCCCCCCCcceEEEeCCCCCc--eEEEeeeCCEEEEEeC--------
Q psy16020 19 LPPVHVQGRVVCALAD--------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS--VRSLAAVYNKVWCGYK-------- 80 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~n--------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~p--V~~m~~v~~~Lw~g~~-------- 80 (151)
.+....++++|+..+. ..+-+|+.. ...|. .+.....| -.+++..+++||+-.|
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~-~~~W~-------~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPV-AAKWS-------EVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCT 174 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETT-TTEEE-------EECCCSSCEESCEEEEETTEEEEECCEESSSCBC
T ss_pred cceEEECCEEEEEcCccCCCCcccceEEEEeCC-CCCEe-------ECCCCCCcccccEEEEECCEEEEEcCCCCCCCcc
Confidence 4455567887776542 136667653 24453 12221122 2345557899887543
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020 81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ 136 (151)
Q Consensus 81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~ 136 (151)
+.++++|+++.+-.+. ..-+ ....-+.++..++.+++.++.+ ..+..||..+.+
T Consensus 175 ~~~~~yd~~~~~W~~~-~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDL-APMK-TPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CCEEEEETTTTEEEEE-CCCS-SCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ceEEEEcCCCCEEEEC-CCCC-CCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 3599999998764332 2111 1123455666788888887643 457788887643
No 287
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.36 E-value=5.7 Score=30.04 Aligned_cols=68 Identities=16% Similarity=0.074 Sum_probs=40.7
Q ss_pred ceEEEeeeC--CEEEEE-eC-----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEE-c-----------
Q psy16020 64 SVRSLAAVY--NKVWCG-YK-----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSI-R----------- 122 (151)
Q Consensus 64 pV~~m~~v~--~~Lw~g-~~-----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~-~----------- 122 (151)
.+..+.+.. +.|+.+ .. +.|++||.++++...... .. ... ..+++ +|-++.. +
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP----PCS-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC----SEE-EEEECSSSSEEEEEECCC--------
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC----CCC-CCccCCCCceEEEecCCcceeecccc
Confidence 466667753 445544 32 339999999988655433 21 122 55655 4433332 1
Q ss_pred -----CCCeEEEEeCCccce
Q psy16020 123 -----LDSTLRMYNAHTYQH 137 (151)
Q Consensus 123 -----~d~~l~lwd~~t~~~ 137 (151)
.+..|++||..+.+.
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp --CCCCCCEEEEEETTTTBC
T ss_pred ccccCCCCcEEEEecccCce
Confidence 457899999987654
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=88.83 E-value=1.7 Score=34.62 Aligned_cols=118 Identities=14% Similarity=0.128 Sum_probs=74.6
Q ss_pred eeeeCCC---ceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEe------CCCCCceEEEee----eCC
Q psy16020 10 PLNKILD---TALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTL------GLPHHSVRSLAA----VYN 73 (151)
Q Consensus 10 ~~i~l~~---~V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l------~~~~~pV~~m~~----v~~ 73 (151)
+.|.++. -.-++.+.+ +++|++. .+|+|.+|+...+. ...+.+ |++......|.. -++
T Consensus 4 ~~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~------~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g 77 (334)
T 2p9w_A 4 DQIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS------HFNVVIDGASSNGDGEQQMSGLSLLTHDNSK 77 (334)
T ss_dssp SEEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCC------EEEECCTTTCCSSCCSEEEEEEEESSSSSCC
T ss_pred ceEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe------EEEEecCCccccCCCcceeeEEEEeccCCCC
Confidence 3455552 456778875 7888887 68999999764211 112222 221122356666 357
Q ss_pred EEEEEeC---------------CeEEEEeCC---CCcEEEEEEe--cCC--------CCCceeEEEEeCCE-EEEEEcCC
Q psy16020 74 KVWCGYK---------------NKIHVVDPK---SLVVLKSFDA--HPR--------RESQVRQMTWAGDG-VWVSIRLD 124 (151)
Q Consensus 74 ~Lw~g~~---------------n~I~vid~~---t~~i~~~~~~--h~~--------~~~~I~~m~~~~~~-vwis~~~d 124 (151)
+||+... +.++.+|+. |++......- ..+ .....+.|+.+.+| ++++.+..
T Consensus 78 rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~ 157 (334)
T 2p9w_A 78 RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG 157 (334)
T ss_dssp EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC
Confidence 8998432 569999999 8887666552 111 11248889998664 48888888
Q ss_pred -CeEEEEeCC
Q psy16020 125 -STLRMYNAH 133 (151)
Q Consensus 125 -~~l~lwd~~ 133 (151)
+.|...+..
T Consensus 158 ~~~I~rV~pd 167 (334)
T 2p9w_A 158 MPAIARVSAD 167 (334)
T ss_dssp SCEEEEECTT
T ss_pred CCeEEEEeCC
Confidence 888888776
No 289
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=88.62 E-value=1.8 Score=36.20 Aligned_cols=59 Identities=10% Similarity=0.169 Sum_probs=38.6
Q ss_pred EEEEecCCcEEEEEcCCCCCCC---CCcceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEEE
Q psy16020 28 VVCALADGSVAIFRRGPDGQWD---LSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVV 86 (151)
Q Consensus 28 v~vgl~nG~l~v~~~~~~~~wd---~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vi 86 (151)
+|+|+.+|.|.-.-....+.++ .-....+++....+||+.|.+.. +.||++++++|.=+
T Consensus 424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 9999999998776554333331 11234556654458999999864 68999999887654
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=88.41 E-value=11 Score=31.91 Aligned_cols=118 Identities=9% Similarity=-0.010 Sum_probs=64.4
Q ss_pred eCCCceeeeEEe--CCeEEEEecC----------C--cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEE
Q psy16020 13 KILDTALPPVHV--QGRVVCALAD----------G--SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWC 77 (151)
Q Consensus 13 ~l~~~V~~i~~~--~~~v~vgl~n----------G--~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~ 77 (151)
.+|..-...... ++++|+..+. + .+.+|+.. .+.|.. ...+.... ..-..+.++ .+++||+
T Consensus 183 ~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~-t~~w~~--~~~~~~~~-~~~~~~~~~~~~g~lyv 258 (656)
T 1k3i_A 183 DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS-TGIVSD--RTVTVTKH-DMFCPGISMDGNGQIVV 258 (656)
T ss_dssp ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT-TCCBCC--CEEEECSC-CCSSCEEEECTTSCEEE
T ss_pred cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC-CCcEEe--CcccCCCC-CCccccccCCCCCCEEE
Confidence 355433344444 7788876532 1 46666653 356742 12222221 112223443 4688887
Q ss_pred EeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEc-CC-----CeEEEEeCCccc
Q psy16020 78 GYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIR-LD-----STLRMYNAHTYQ 136 (151)
Q Consensus 78 g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~-~d-----~~l~lwd~~t~~ 136 (151)
..| +.+++||+.+.+-.+.-..+.. ..=+.++.. ++.+++.++ .+ ..+.+||..+.+
T Consensus 259 ~GG~~~~~v~~yd~~t~~W~~~~~~~~~--R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 259 TGGNDAKKTSLYDSSSDSWIPGPDMQVA--RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp ECSSSTTCEEEEEGGGTEEEECCCCSSC--CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred eCCCCCCceEEecCcCCceeECCCCCcc--ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 665 4799999998764433222221 122344455 667787777 33 679999998754
No 291
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.94 E-value=1.3 Score=33.81 Aligned_cols=67 Identities=6% Similarity=-0.036 Sum_probs=41.8
Q ss_pred CCEEEEEeC----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020 72 YNKVWCGYK----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 72 ~~~Lw~g~~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i 141 (151)
++.|..+.. ..|+++|+++++..+... +.. .......++++|- .+..+.+..|++||..+.+..+..
T Consensus 47 G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-~~~--~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~ 118 (396)
T 3c5m_A 47 GKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-GKG--DNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIY 118 (396)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTTEEEECCC-SSC--BCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEecCCCceEEEEECCCCcEEEeec-CCC--CccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE
Confidence 356555542 279999999988654433 221 1222245666654 446667779999999987755444
No 292
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.34 E-value=8.2 Score=29.44 Aligned_cols=97 Identities=12% Similarity=0.071 Sum_probs=54.8
Q ss_pred EeCCeEEEEec--CCcEEEEEcCC-CCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC------------CeEEEEe
Q psy16020 23 HVQGRVVCALA--DGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK------------NKIHVVD 87 (151)
Q Consensus 23 ~~~~~v~vgl~--nG~l~v~~~~~-~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~------------n~I~vid 87 (151)
..++++|+..+ ...+.+|+... ...|..-.+ +......-.+++.++++||+-.| +.++++|
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~----~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAA----FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCC----CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEE
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCC----CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEe
Confidence 34888888664 34688888753 456742111 11001222456667899886433 3599999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD 124 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d 124 (151)
+.+.+-.+.-...+. ...=+.++..++.+++.++.+
T Consensus 93 ~~~~~W~~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 93 PKTNSWVKLMSHAPM-GMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTTTEEEECSCCCSS-CCSSEEEEEETTEEEEEECCC
T ss_pred CCCCcEEECCCCCCc-ccccceEEEECCEEEEEeCcC
Confidence 998764332111111 123344555788888888754
No 293
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=87.07 E-value=13 Score=31.60 Aligned_cols=71 Identities=15% Similarity=0.196 Sum_probs=47.2
Q ss_pred eeCCEEEEEeC-----CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC-ccceeeeEe
Q psy16020 70 AVYNKVWCGYK-----NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH-TYQHLQDVD 142 (151)
Q Consensus 70 ~v~~~Lw~g~~-----n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~-t~~~l~~id 142 (151)
.-+++|+..+. .+|+++|.++++ ..+.+..+.+ ..+..+...++.++++.++++..+||... +.+..+.+.
T Consensus 325 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~--~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 325 GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESK--DNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCS--SEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECB
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCC--CeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeecc
Confidence 34678887763 369999998852 3334433432 35777777888888899999887777544 345555554
No 294
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=86.74 E-value=13 Score=31.31 Aligned_cols=72 Identities=8% Similarity=-0.041 Sum_probs=49.9
Q ss_pred eCCEEEEEeC-----CeEEEEeCCCCc--EEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCe--EEEEeCCccceeee
Q psy16020 71 VYNKVWCGYK-----NKIHVVDPKSLV--VLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDST--LRMYNAHTYQHLQD 140 (151)
Q Consensus 71 v~~~Lw~g~~-----n~I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~--l~lwd~~t~~~l~~ 140 (151)
-+++|+..+. .+|+++|..+++ ..+.+..|.+ ...+..+.++ ++.+.++.++++. |++||..+++.++.
T Consensus 296 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~ 374 (710)
T 2xdw_A 296 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKI 374 (710)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEe
Confidence 4678887663 269999998875 2355555643 2367788888 7778888888874 66778767777666
Q ss_pred EeC
Q psy16020 141 VDI 143 (151)
Q Consensus 141 idi 143 (151)
|..
T Consensus 375 l~~ 377 (710)
T 2xdw_A 375 FPL 377 (710)
T ss_dssp ECC
T ss_pred cCC
Confidence 643
No 295
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=86.51 E-value=8.3 Score=28.69 Aligned_cols=110 Identities=10% Similarity=-0.002 Sum_probs=64.5
Q ss_pred eeeEEeCCeEEEEecC-----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC--------CeEEE
Q psy16020 19 LPPVHVQGRVVCALAD-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK--------NKIHV 85 (151)
Q Consensus 19 ~~i~~~~~~v~vgl~n-----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~--------n~I~v 85 (151)
.+....++++|+..+. ..+.+|+.. .+.|. .+.--.....-.++...+++||+-.| +.+++
T Consensus 49 ~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~-~~~W~-----~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 122 (306)
T 3ii7_A 49 AACVFWDNVVYILGGSQLFPIKRMDCYNVV-KDSWY-----SKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFEC 122 (306)
T ss_dssp CEEEEETTEEEEECCBSSSBCCEEEEEETT-TTEEE-----EEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEE
T ss_pred eEEEEECCEEEEEeCCCCCCcceEEEEeCC-CCeEE-----ECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEE
Confidence 4445568888877653 457777754 23452 11111101222355567899887543 45999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcC---------CCeEEEEeCCccc
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRL---------DSTLRMYNAHTYQ 136 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~---------d~~l~lwd~~t~~ 136 (151)
+|+.+.+-.+. ..-+ ....-+.++..++.+++.++. ...+..||..+.+
T Consensus 123 ~d~~~~~W~~~-~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 123 YDTRTESWHTK-PSML-TQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp EETTTTEEEEE-CCCS-SCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred EeCCCCceEeC-CCCc-CCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 99998875443 2111 122344556668888877764 4568899988753
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=85.53 E-value=13 Score=29.96 Aligned_cols=66 Identities=11% Similarity=0.123 Sum_probs=45.6
Q ss_pred EEeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC
Q psy16020 67 SLAAV--YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 67 ~m~~v--~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~ 133 (151)
.+++. ++.||++.. ++|+.+|++++++...+..... ...-..|++++++ +|++-.....|+.+|..
T Consensus 232 giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~-~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 232 TCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT-KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC-CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC-CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 44443 578999883 5899999999988444432222 1223468887554 89999999999997743
No 297
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=85.23 E-value=13 Score=29.80 Aligned_cols=108 Identities=6% Similarity=0.087 Sum_probs=65.5
Q ss_pred ceeeeEEeC--CeEEEEecCC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeEEE
Q psy16020 17 TALPPVHVQ--GRVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHV 85 (151)
Q Consensus 17 ~V~~i~~~~--~~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~v 85 (151)
....|.... ++||++-..+ .+.++.. +|.+. ....+.-.. .| +.+++. ++.||++. .++|+.
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~--~g~~~--~~~~l~~~~--~p-~giavdp~~g~lyv~d~~~~~V~~ 252 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTR--ESGFK--VITELTKGQ--NC-NGAETHPINGELYFNSWNAGQVFR 252 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG--GGTSC--SEEEEEECS--SC-CCEEECTTTCCEEEEETTTTEEEE
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeC--CCcee--eeeeeccCC--Cc-eEEEEeCCCCEEEEEECCCCEEEE
Confidence 355555543 3599987632 2444443 34432 122332222 33 445554 57899887 369999
Q ss_pred EeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC
Q psy16020 86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~ 133 (151)
+|+++.+....+.... ....+.|++++++ +|++-.....|..++..
T Consensus 253 ~~~~~~~~~~~~~~~~--~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 253 YDFTTQETTPLFTIQD--SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EETTTTEEEEEEECSS--SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EECCCCcEEEEEEcCC--CCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 9999877643333221 2357788888554 78999999999998755
No 298
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.22 E-value=4 Score=32.97 Aligned_cols=124 Identities=9% Similarity=0.013 Sum_probs=77.0
Q ss_pred eeeeEE--eCCeEEEEecC---C---cEEEEEcCCCCCCCCCcceE-EEe---CCCC--CceEEEeee-CCEEEEEe---
Q psy16020 18 ALPPVH--VQGRVVCALAD---G---SVAIFRRGPDGQWDLSKYHT-VTL---GLPH--HSVRSLAAV-YNKVWCGY--- 79 (151)
Q Consensus 18 V~~i~~--~~~~v~vgl~n---G---~l~v~~~~~~~~wd~~~~~~-i~l---~~~~--~pV~~m~~v-~~~Lw~g~--- 79 (151)
.+.+.. .++++|++.-- | +|+.......+.-.-..|.. .+. ++++ -+|..+.+= .++||+=-
T Consensus 28 P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLDtG~ 107 (381)
T 3q6k_A 28 STAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVDIGS 107 (381)
T ss_dssp CCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEECSS
T ss_pred eeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEeCCC
Confidence 345666 67899998743 2 56766543100000011222 121 1111 445555543 48899732
Q ss_pred --------------CCeEEEEeCCCC--cEEEEEEecC---CCCCceeEEEEe---------CCEEEEEEcCCCeEEEEe
Q psy16020 80 --------------KNKIHVVDPKSL--VVLKSFDAHP---RRESQVRQMTWA---------GDGVWVSIRLDSTLRMYN 131 (151)
Q Consensus 80 --------------~n~I~vid~~t~--~i~~~~~~h~---~~~~~I~~m~~~---------~~~vwis~~~d~~l~lwd 131 (151)
..+|.+||++|. ++.+++.-.. ...+.++.+++. +.-++|+-..++-|.+||
T Consensus 108 ~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVyd 187 (381)
T 3q6k_A 108 VEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYD 187 (381)
T ss_dssp CSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEE
T ss_pred cCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEE
Confidence 348999999999 9999988431 134679999988 234599999999999999
Q ss_pred CCccceeeeE
Q psy16020 132 AHTYQHLQDV 141 (151)
Q Consensus 132 ~~t~~~l~~i 141 (151)
..+.+--.-.
T Consensus 188 l~~~~swRv~ 197 (381)
T 3q6k_A 188 HKKQDSWNVT 197 (381)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCcEEEEc
Confidence 9986655443
No 299
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=85.09 E-value=2.8 Score=33.76 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=56.5
Q ss_pred eCCEEEEEe----CC--eEEEEeCCCCcEEEEEEecCCCCCceeEE-----EEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020 71 VYNKVWCGY----KN--KIHVVDPKSLVVLKSFDAHPRRESQVRQM-----TWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 139 (151)
Q Consensus 71 v~~~Lw~g~----~n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m-----~~~~~~vwis~~~d~~l~lwd~~t~~~l~ 139 (151)
.+++-|... .+ .|.++|.+++++++++.-...+...|..+ ....+.+|++......|.++|.+ ++.+.
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~-G~~~~ 114 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQ-GEIIR 114 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTT-CCEEE
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCC-ceEEE
Confidence 556544443 47 99999999999999988765543343332 22477889999999999999998 89999
Q ss_pred eEeCCcc
Q psy16020 140 DVDIEPY 146 (151)
Q Consensus 140 ~idi~~~ 146 (151)
++++.+.
T Consensus 115 k~~~~~~ 121 (369)
T 3s9j_A 115 NYNFQTP 121 (369)
T ss_dssp EEECCCT
T ss_pred EEecCCC
Confidence 9887654
No 300
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.33 E-value=13 Score=28.87 Aligned_cols=115 Identities=8% Similarity=-0.047 Sum_probs=72.3
Q ss_pred ceeeeEEe--CCeEEEEecC--CcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeee--CCEEEEEeC--CeEEEEe
Q psy16020 17 TALPPVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAV--YNKVWCGYK--NKIHVVD 87 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~n--G~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v--~~~Lw~g~~--n~I~vid 87 (151)
....|... ++.+|++-.. +.|..++.+ |. ... .+.. .-.--+.|++- +++||.+-. ++|+.+|
T Consensus 160 ~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~----~~~--~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 160 KPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GS----GRR--IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT--SC----SCE--ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcceEEEecCcCeEEEeccCCCCEEEEEeCC--CC----CcE--EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 34555554 4677777643 456666543 32 111 1211 01222566664 688998873 5899999
Q ss_pred CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
.+.... +.+... .......|++.++.+|++-.....|..+|..+++....|.
T Consensus 232 ~dG~~~-~~~~~~--~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 232 LDGSHR-KAVISQ--GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TTSCSC-EEEECS--SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCce-EEEEeC--CCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 875333 333322 1346788888899999999999999999988887777764
No 301
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=84.14 E-value=9.7 Score=32.47 Aligned_cols=105 Identities=10% Similarity=0.089 Sum_probs=59.3
Q ss_pred eCCeEEEEec----CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe--CC--eEEEEeCCCCcEEE
Q psy16020 24 VQGRVVCALA----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY--KN--KIHVVDPKSLVVLK 95 (151)
Q Consensus 24 ~~~~v~vgl~----nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~--~n--~I~vid~~t~~i~~ 95 (151)
.++++|+... ++.|.+++..... .....+- ......+..+...+++|++.. ++ +|+++|.. ++..+
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~~l~-~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~-g~~~~ 399 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDLSGST----PRFDTVV-PESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLD-GKPAG 399 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEECSSSS----CEEEEEE-CCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETT-SCEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCc----cccEEEe-cCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC-CCcee
Confidence 4455655543 3446666643210 1112222 222356777777788876665 23 68888874 55556
Q ss_pred EEEecCCCCCceeEEEEeCC--EEEEEEc---CCCeEEEEeCCccc
Q psy16020 96 SFDAHPRRESQVRQMTWAGD--GVWVSIR---LDSTLRMYNAHTYQ 136 (151)
Q Consensus 96 ~~~~h~~~~~~I~~m~~~~~--~vwis~~---~d~~l~lwd~~t~~ 136 (151)
.+..+. ...|..+..+++ .++++.+ ..+.|++||..+.+
T Consensus 400 ~l~~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 400 AVSLPG--IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ECBCSS--SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eccCCC--CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 665432 246777766533 4554443 45789999998765
No 302
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=82.23 E-value=14 Score=28.00 Aligned_cols=109 Identities=9% Similarity=0.023 Sum_probs=62.3
Q ss_pred eeeeEEeCCeEEEEecC-----------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC------
Q psy16020 18 ALPPVHVQGRVVCALAD-----------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK------ 80 (151)
Q Consensus 18 V~~i~~~~~~v~vgl~n-----------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~------ 80 (151)
=.+....++++|+-.+. ..+-+|+.. ...|..-.+ ......--.+++..+++||+-.|
T Consensus 58 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~-~~~W~~~~~----~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 132 (357)
T 2uvk_A 58 QATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK-TNSWVKLMS----HAPMGMAGHVTFVHNGKAYVTGGVNQNIF 132 (357)
T ss_dssp SCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT-TTEEEECSC----CCSSCCSSEEEEEETTEEEEEECCCHHHH
T ss_pred cceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC-CCcEEECCC----CCCcccccceEEEECCEEEEEeCcCCCcC
Confidence 34555668888886543 247777764 345632211 11000112344557899887654
Q ss_pred -----------------------------------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcC--
Q psy16020 81 -----------------------------------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRL-- 123 (151)
Q Consensus 81 -----------------------------------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~-- 123 (151)
+.++++|+++.+-...-. -+.....-..++..++.+++.++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~~~~iyv~GG~~~ 211 (357)
T 2uvk_A 133 NGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNKGDKTWLINGEAK 211 (357)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEETTEEEEECCEEE
T ss_pred cccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC-CCCCCcccccEEEECCEEEEEeeecC
Confidence 579999999876444322 111111225667778888887664
Q ss_pred ----CCeEEEEeC
Q psy16020 124 ----DSTLRMYNA 132 (151)
Q Consensus 124 ----d~~l~lwd~ 132 (151)
...+..||.
T Consensus 212 ~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 212 PGLRTDAVFELDF 224 (357)
T ss_dssp TTEECCCEEEEEC
T ss_pred CCcccCceEEEEe
Confidence 455777765
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=81.09 E-value=3.4 Score=35.70 Aligned_cols=70 Identities=11% Similarity=0.049 Sum_probs=48.9
Q ss_pred CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 72 YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 72 ~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+++||.+-. ++|+++|.+.... +.+............|++.++.++++-...+.|..+|..+++.+..|.
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred CCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 467887773 5899999875333 333221111234566777888998788889999999999888888774
No 304
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=80.15 E-value=18 Score=27.73 Aligned_cols=116 Identities=10% Similarity=-0.038 Sum_probs=73.5
Q ss_pred ceeeeEEe--CCeEEEEec--CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020 17 TALPPVHV--QGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP 88 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~--nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~ 88 (151)
....|... .+.+|++-. ++.|..++.+ |. ....+--..-..| +.|++- +++||.+-. ++|+.+|.
T Consensus 123 ~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~----~~~~~~~~~l~~P-nglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 123 QPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GS----SRFIIINSEIYWP-NGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp SEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SC----SCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CC----CeEEEEECCCCCc-cEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 34455554 467888763 4666666543 42 1122211111123 566664 588988873 68999998
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.... +.+.. ........|++.+++++.+-...+.|..+|..+++....|.
T Consensus 196 dG~~~-~~~~~--~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 196 DGTNR-QAVVK--GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TSCSC-EEEEC--SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCce-EEEec--CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 74333 33331 12346788888999998888899999999998888777764
No 305
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=78.08 E-value=9 Score=31.91 Aligned_cols=60 Identities=10% Similarity=0.071 Sum_probs=40.6
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEE-EeeeCCEEEEEeCCeEEEEeC
Q psy16020 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRS-LAAVYNKVWCGYKNKIHVVDP 88 (151)
Q Consensus 28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~-m~~v~~~Lw~g~~n~I~vid~ 88 (151)
+|+|..+|.|.-.-....+... .....+.+....+||.. |...++.||++++++|.-+-.
T Consensus 421 ~FlGT~~G~l~Kv~~~~~~~~~-~~~~~~~~~~~~~pi~~~l~~~~~~Lyv~s~~~V~~vpv 481 (527)
T 4fww_A 421 AHMGTMDGRILQVELVRSLNYL-LYVSNFSLGDSGQPVQRDVSRLGDHLLFASGDQVFQVPI 481 (527)
T ss_dssp EEEEETTSEEEEEECSCCSSCC-CEEEEEEETTSCCCBCSCCEEETTEEEEEETTEEEEEET
T ss_pred EEEECCCCeEEEEEEcCCCCcc-eEEEEEEecCCCceeehhcccCCCEEEEEECCEEEEEec
Confidence 9999999998877654433321 12234566655588864 455578999999998876643
No 306
>3nvx_A Protein A39; beta-propeller, viral protein; HET: NAG; 2.00A {Vaccinia virus} PDB: 3nvn_A*
Probab=77.30 E-value=7.5 Score=31.54 Aligned_cols=67 Identities=7% Similarity=0.080 Sum_probs=50.2
Q ss_pred CCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEE---eCCEEEEEEcCCCeEEEEeCC
Q psy16020 62 HHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTW---AGDGVWVSIRLDSTLRMYNAH 133 (151)
Q Consensus 62 ~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~---~~~~vwis~~~d~~l~lwd~~ 133 (151)
.+++..|...++.||+|..|.||-++.+.+. +..-+.| + .|+-|.. .++.+++.+.+.-.-.+|...
T Consensus 10 ~e~~~~~~~~~~~l~vG~r~~ly~ls~~~~c-k~~~eC~-N---yIrVL~~~~~~~~~L~vCGTNAf~P~C~~~~ 79 (383)
T 3nvx_A 10 SEEIISTYLLDDVLYTGVNGAVYTFSNNKLN-KTGLTNN-N---YITTSIKVEDADKDTLVCGTNNGNPKCWKID 79 (383)
T ss_dssp CCCCCEEEEETTEEEEECBSEEEEEETTEEE-EEECCSS-C---BEEEEEEC----CCEEEEECGGGSCEEEETT
T ss_pred CcceeEEEeCCCeEEEcccceEEEEeccccc-cChhHhc-c---eEEEEEEccCCCCeEEEecCCCCCCceEeec
Confidence 4888899977899999999999999987763 3334444 2 8888877 346878888887777777763
No 307
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=76.87 E-value=33 Score=29.01 Aligned_cols=115 Identities=11% Similarity=-0.027 Sum_probs=66.4
Q ss_pred ceeeeEEe--CCeEEEEec--CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020 17 TALPPVHV--QGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP 88 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~--nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~ 88 (151)
.+..|... .+++|++-- ++.|..++. +|. ....+--..-..| +.|++- +++||.+-. ++|.++|.
T Consensus 128 ~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~--dG~----~~~~l~~~~~~~P-~Glald~~~~~LY~aD~~~~~I~~~~~ 200 (619)
T 3s94_A 128 QPRAIALDPSSGFMYWTDWGEVPKIERAGM--DGS----SRFIIINSEIYWP-NGLTLDYEEQKLYWADAKLNFIHKSNL 200 (619)
T ss_dssp CCCCEEEETTTTEEEEEECSSSCEEEEEET--TSC----SCEEEECSSCSSE-EEEEEETTTTEEEEEETTTCCEEEESS
T ss_pred CCceEEEecCCCeEEEeccCCCCEEEEEEC--CCC----ceEEEEeCCCCCC-cEEEEEccCCEEEEEeCCCCeEEEecC
Confidence 34455553 357777652 345544443 232 2222211111133 566665 588888873 58999998
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+......-.++. ......|++.++.++.+-.....|...|..+++....|
T Consensus 201 dG~~~~~~~~~~---~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 201 DGTNRQAVVKGS---LPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp SCCEEC------------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred CCCccEEEEeCC---CCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEE
Confidence 764443333211 12456778888899889889999999999988766554
No 308
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=75.43 E-value=11 Score=32.79 Aligned_cols=63 Identities=10% Similarity=0.153 Sum_probs=38.8
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCC-Cc--ceEEEeCCCCCceEEEeee--CCEEEEEeCCeEEEEeCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDL-SK--YHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPK 89 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~-~~--~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n~I~vid~~ 89 (151)
-+|+|+.+|.|.-.-....+.+.. +. ...+++.....||+.|.+. .+.||+++.++|.=+-..
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kVPl~ 498 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLPLH 498 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEEESC
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEEEhh
Confidence 399999999986443322232211 11 1234555445999999986 478999999887766443
No 309
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=74.69 E-value=8.3 Score=27.86 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=46.7
Q ss_pred EEeCCeEEEEeCCCCcEEEEEEe---cCCCCCceeEEEEe--CCEEEEEE-------------cCCCeEEEEeCCcccee
Q psy16020 77 CGYKNKIHVVDPKSLVVLKSFDA---HPRRESQVRQMTWA--GDGVWVSI-------------RLDSTLRMYNAHTYQHL 138 (151)
Q Consensus 77 ~g~~n~I~vid~~t~~i~~~~~~---h~~~~~~I~~m~~~--~~~vwis~-------------~~d~~l~lwd~~t~~~l 138 (151)
+.||..|.+.+..|+..+.+-.. .....++|++.... .+..|+-. ..+..|||+|..|.+.|
T Consensus 7 V~~Gs~I~L~h~~t~~~LHSH~~~y~~gs~qQqVT~y~~~~D~nn~W~I~~~~~~~~~~~~~v~~Gd~IRL~H~~T~~~L 86 (187)
T 1t9f_A 7 VTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNAKCNRGDAIKCGDKIRLKHLTTGTFL 86 (187)
T ss_dssp CBTTCEEEEEETTTCCEEEEEEEECSSSSCCEEEEEESCSSCGGGCEEEEECTTCCCCTTCBCCTTCEEEEEETTTCCEE
T ss_pred EEeCCEEEEEECCCCcccEeCCccCCCCCCceEEEEECCCCCCCCEEEEEecCCCccCCCCEeccCCEEEEEECCCCCCE
Confidence 46788899999888877766442 11122347774331 23457542 34578999999999888
Q ss_pred eeEeCCcccc
Q psy16020 139 QDVDIEPYVS 148 (151)
Q Consensus 139 ~~idi~~~v~ 148 (151)
..=++++++.
T Consensus 87 hsh~~~~p~s 96 (187)
T 1t9f_A 87 HSHHFTAPLS 96 (187)
T ss_dssp EEEEEECSSC
T ss_pred eECCcCCCCC
Confidence 7766666654
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=73.99 E-value=16 Score=27.62 Aligned_cols=109 Identities=7% Similarity=-0.023 Sum_probs=62.7
Q ss_pred ceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCC-CceEEEee-eCCEEEEEeCCeEEEEeCCCCcE
Q psy16020 17 TALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH-HSVRSLAA-VYNKVWCGYKNKIHVVDPKSLVV 93 (151)
Q Consensus 17 ~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~-~pV~~m~~-v~~~Lw~g~~n~I~vid~~t~~i 93 (151)
.+.+|.++ ++.||+. .+|.|.-++....+....-.. .-.+|... .-=.++.+ .++.||++.+++||=+++-+-.-
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav~dG~iyr~~pP~~~~ 119 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAVSKDKLYKASPPQSDT 119 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEEETTEEEEESCCCSTT
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEeCCCEEEEeCCCcCCC
Confidence 66688887 4579999 899977776543222111111 22333210 11244555 35789999888999998754111
Q ss_pred EE----EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEE
Q psy16020 94 LK----SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLR 128 (151)
Q Consensus 94 ~~----~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~ 128 (151)
.. .-......-..++.+...++|++.+.. |+.++
T Consensus 120 ~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ly 157 (236)
T 1tl2_A 120 DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFY 157 (236)
T ss_dssp CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEE
T ss_pred CceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEE
Confidence 00 011111112357888899999977777 77764
No 311
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=73.26 E-value=32 Score=27.13 Aligned_cols=117 Identities=9% Similarity=-0.033 Sum_probs=73.8
Q ss_pred eeeeEEe--CCeEEEEec--CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC
Q psy16020 18 ALPPVHV--QGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK 89 (151)
Q Consensus 18 V~~i~~~--~~~v~vgl~--nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~ 89 (151)
+..|... .+++|++-. ++.|..++.+ |. ....+--..- .--+.|++- +++||.+-. ++|..+|.+
T Consensus 204 P~~iavdp~~g~ly~td~~~~~~I~~~~~d--G~----~~~~~~~~~l-~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GV----DIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp EEEEEEETTTTEEEEEECSSSCCEEEEETT--SC----SCEEEECSSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cceEEEecccCeEEEEeCCCCCEEEEEeCC--CC----ccEEEEECCC-CceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 4555554 467887763 3566666543 32 2222211111 223566664 578888873 589999987
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
......-.... ........|+..++.++.+-.....|..+|..+++.+..|.
T Consensus 277 G~~~~~~~~~~-~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 277 GGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp SCCCEEEEECS-STTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CCccEEEEeCC-CCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 54443333322 22346778888899997788889999999988888777774
No 312
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=70.60 E-value=35 Score=26.43 Aligned_cols=111 Identities=12% Similarity=0.130 Sum_probs=61.0
Q ss_pred CceeeeEEe---CCeEEEEecCC----cEEEEEcCCCCCCCCCcceEEEeCC--------CCCceEEEeee----CCEEE
Q psy16020 16 DTALPPVHV---QGRVVCALADG----SVAIFRRGPDGQWDLSKYHTVTLGL--------PHHSVRSLAAV----YNKVW 76 (151)
Q Consensus 16 ~~V~~i~~~---~~~v~vgl~nG----~l~v~~~~~~~~wd~~~~~~i~l~~--------~~~pV~~m~~v----~~~Lw 76 (151)
..|.+|... ++.+|+|...| -|.. ..+.+.+|..-... ..+.. ....|.++++- ++.||
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~-s~D~G~tW~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFR-SDDGGGNWTEATRP-PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEE-ESSTTSCCEECSBC-CCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEE-eCCCCCCceECCcc-ccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 578899886 57899999887 4443 33445577432110 00111 01247777774 57899
Q ss_pred EEe-CCeEEEEeCCCCcEEEEEEe---cC-------------CCCCceeEEEEeC---CEEEEEEcCCCeEEE
Q psy16020 77 CGY-KNKIHVVDPKSLVVLKSFDA---HP-------------RRESQVRQMTWAG---DGVWVSIRLDSTLRM 129 (151)
Q Consensus 77 ~g~-~n~I~vid~~t~~i~~~~~~---h~-------------~~~~~I~~m~~~~---~~vwis~~~d~~l~l 129 (151)
++. .+.|+..+ +.++--+.+.. ++ .....|..|...+ +.+|+.....+..+-
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 987 46787764 33332222221 11 1123578888763 567887665554433
No 313
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=70.30 E-value=22 Score=30.45 Aligned_cols=61 Identities=5% Similarity=0.055 Sum_probs=39.4
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceE--EEeCCCCCceEEEeeeC--CEEEEEeCCeEEEEeC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHT--VTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVVDP 88 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~--i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vid~ 88 (151)
-+|+|+.+|.|.-.-...++... ..... +.+.....||+.|.+.. ..||++++.+|.=+..
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~-~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVPl 446 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHS-FAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPL 446 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTC-CCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEET
T ss_pred EEEEEcCCcEEEEEEecCCCCcc-eeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcch
Confidence 38999999998766544323211 11112 33322348999999864 6899999988766654
No 314
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=67.88 E-value=63 Score=28.35 Aligned_cols=117 Identities=9% Similarity=-0.030 Sum_probs=73.3
Q ss_pred ceeeeEEe--CCeEEEEec-C-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020 17 TALPPVHV--QGRVVCALA-D-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP 88 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~-n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~ 88 (151)
.+..|... .++||++-. + +.|.+++.+ |. ....+--..- .--+.|++- +++||.+-. ++|.++|.
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G~----~~~~lv~~~l-~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GV----DIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT--SC----CEEEEECSSC-SCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecC--CC----ceEEEEeCCC-CCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 34555553 357877752 2 556666543 32 1122211111 233566664 688888873 58999998
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
+.......+... ........|.+.++.++++-.....|...|..+++.+..|
T Consensus 588 dG~~~~~v~~~~-~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 588 NGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TSCSCEEEEECT-TTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CCCceEEEecCC-CccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 765554444432 1233567888889999889999999999998888776666
No 315
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=66.02 E-value=49 Score=26.43 Aligned_cols=109 Identities=6% Similarity=-0.118 Sum_probs=65.4
Q ss_pred ceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC-----C-eEEE
Q psy16020 17 TALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-----N-KIHV 85 (151)
Q Consensus 17 ~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~-----n-~I~v 85 (151)
.+..|...+ +.||++-..+.|..|+... + ....+.........|++- ++.||++.. . .++.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~-g-------~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVN-Q-------YVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTT-T-------EEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCC-C-------EEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEE
Confidence 345666664 7899998768888887631 2 122222222445677775 345998874 1 3666
Q ss_pred EeCCCCcE-EEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccce
Q psy16020 86 VDPKSLVV-LKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 86 id~~t~~i-~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
++...... ...+.. ......+++.+ ..+|++-...+.|+.+|..+++.
T Consensus 212 ~~~~~~~~~~~~~~~----~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 212 FTRASGFTERLSLCN----ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp ECGGGTTCCEEEEEE----CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred EECCCCeeccccccc----cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 76553322 122221 12455566664 45688888888999999886655
No 316
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=65.99 E-value=27 Score=29.54 Aligned_cols=54 Identities=9% Similarity=-0.061 Sum_probs=31.6
Q ss_pred eEEEEeCCCCcEEEEEEecCC--CCCceeEEEEeCCEEEE--EEcC---CCeEEEEeCCcc
Q psy16020 82 KIHVVDPKSLVVLKSFDAHPR--RESQVRQMTWAGDGVWV--SIRL---DSTLRMYNAHTY 135 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwi--s~~~---d~~l~lwd~~t~ 135 (151)
+|+.++..|.+-+...--+.. ..........+++|-|+ +... ++.|+++|..+.
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 499999887764322221111 11245667778666544 3332 358999998765
No 317
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=65.62 E-value=22 Score=30.93 Aligned_cols=60 Identities=13% Similarity=0.122 Sum_probs=40.1
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCce-EEEeeeC--CEEEEEeCCeEEEEeC
Q psy16020 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVY--NKVWCGYKNKIHVVDP 88 (151)
Q Consensus 28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV-~~m~~v~--~~Lw~g~~n~I~vid~ 88 (151)
+|+|..+|.|.-...... .+.......+.+.....|| +.|.+.. ..||++.+.+|.=+..
T Consensus 415 lFLGT~~G~l~Kv~~~~~-~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qvPl 477 (681)
T 3oky_A 415 VFVGTKSGKLKKIRADGP-PHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVPV 477 (681)
T ss_dssp EEEEBTTSEEEEEECCCT-TTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEES
T ss_pred EEEECCCceEEEEEECCC-CCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEEEh
Confidence 899999999887654422 1111223445666445888 7898865 5899999987765543
No 318
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=65.34 E-value=52 Score=26.40 Aligned_cols=128 Identities=9% Similarity=0.039 Sum_probs=78.4
Q ss_pred ceeeeeeCCCc-------eeeeEEe---------CCeEEEEec-CCcEEEEEcCCCCCCCCCc----c---eEEEeCCC-
Q psy16020 7 TPYPLNKILDT-------ALPPVHV---------QGRVVCALA-DGSVAIFRRGPDGQWDLSK----Y---HTVTLGLP- 61 (151)
Q Consensus 7 ~~l~~i~l~~~-------V~~i~~~---------~~~v~vgl~-nG~l~v~~~~~~~~wd~~~----~---~~i~l~~~- 61 (151)
+.++.+.+|.. ..+|... ++++|++=+ .+-|.||+...+..|-+.. | ..+.+...
T Consensus 136 ~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~ 215 (381)
T 3q6k_A 136 PEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKE 215 (381)
T ss_dssp CEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEE
T ss_pred eeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEE
Confidence 88999999843 3444444 457888875 4579999998777774432 1 22333220
Q ss_pred ---CCceEEEeeeC------CEEEEEe--CCeEEEEeCCCC---cEEEEEE--ecCCCCCceeEEEEe-CCEE-EEEEcC
Q psy16020 62 ---HHSVRSLAAVY------NKVWCGY--KNKIHVVDPKSL---VVLKSFD--AHPRRESQVRQMTWA-GDGV-WVSIRL 123 (151)
Q Consensus 62 ---~~pV~~m~~v~------~~Lw~g~--~n~I~vid~~t~---~i~~~~~--~h~~~~~~I~~m~~~-~~~v-wis~~~ 123 (151)
..-|..|++.. ..||... +.++|-+.++-+ .....++ +...+.++-..++.+ .+|+ +++.-+
T Consensus 216 ~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~ 295 (381)
T 3q6k_A 216 YEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN 295 (381)
T ss_dssp EEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESS
T ss_pred eEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEecc
Confidence 13567777752 4688776 458998874322 1222222 222112344456665 5666 889999
Q ss_pred CCeEEEEeCCc
Q psy16020 124 DSTLRMYNAHT 134 (151)
Q Consensus 124 d~~l~lwd~~t 134 (151)
.+.|..|++.+
T Consensus 296 ~~aI~~w~~~~ 306 (381)
T 3q6k_A 296 TKQVSCWNTQK 306 (381)
T ss_dssp SSEEEEEETTS
T ss_pred CCeEEEEeCCC
Confidence 99999999985
No 319
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=64.43 E-value=43 Score=25.14 Aligned_cols=109 Identities=9% Similarity=0.152 Sum_probs=70.6
Q ss_pred CceeeeEEe--CCeEEE-EecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCC
Q psy16020 16 DTALPPVHV--QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPK 89 (151)
Q Consensus 16 ~~V~~i~~~--~~~v~v-gl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~ 89 (151)
+.+..|.+. .+.+|+ .-.++.|..++.. | +....++++.. .-.-.+++. ++++|+++. +++++++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g----~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN--G----DLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT--C----CEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC--C----CEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 468888887 467997 5566777777764 3 34456677531 334455555 478999884 589998765
Q ss_pred CCc---EEEEEEe---cCCCCCceeEEEEeCC--EEEEEEcCCC-eEEEEe
Q psy16020 90 SLV---VLKSFDA---HPRRESQVRQMTWAGD--GVWVSIRLDS-TLRMYN 131 (151)
Q Consensus 90 t~~---i~~~~~~---h~~~~~~I~~m~~~~~--~vwis~~~d~-~l~lwd 131 (151)
+.. ..+.... ......-...|++++. .+|++..+++ .|.-|+
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 322 3344431 1122345789999854 6899998888 677776
No 320
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=64.18 E-value=20 Score=30.20 Aligned_cols=64 Identities=9% Similarity=-0.065 Sum_probs=40.2
Q ss_pred eCCEEEEEeC----------C---eEEEEeCCCCcEEEEE--EecCCCCCceeEEEEe-CCEEEEEEcCC----------
Q psy16020 71 VYNKVWCGYK----------N---KIHVVDPKSLVVLKSF--DAHPRRESQVRQMTWA-GDGVWVSIRLD---------- 124 (151)
Q Consensus 71 v~~~Lw~g~~----------n---~I~vid~~t~~i~~~~--~~h~~~~~~I~~m~~~-~~~vwis~~~d---------- 124 (151)
.+++|++-.| + .|+++|+++.+-.... .... ...-..++.. ++.+++.++.+
T Consensus 409 ~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~--~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~ 486 (656)
T 1k3i_A 409 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF--ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTP 486 (656)
T ss_dssp TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS--CCBSCEEEECTTSCEEEECCBSBCCTTCCCSB
T ss_pred CCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC--CcccCCeEECCCCCEEEECCcccCcCcCCCCc
Confidence 4788776543 1 7899999887754433 1111 1233444555 66778888754
Q ss_pred -CeEEEEeCCccc
Q psy16020 125 -STLRMYNAHTYQ 136 (151)
Q Consensus 125 -~~l~lwd~~t~~ 136 (151)
..+.+||..+.+
T Consensus 487 ~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 487 VFTPEIYVPEQDT 499 (656)
T ss_dssp CCCCEEEEGGGTE
T ss_pred ccceEEEcCCCCc
Confidence 568999988744
No 321
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=63.93 E-value=35 Score=29.16 Aligned_cols=108 Identities=6% Similarity=-0.066 Sum_probs=57.6
Q ss_pred CCeEEEEecCC---cEEEEEcCCCCCCCCCcceEEEeCCCCCce--EE-Eeee-C-CEEEEEeC---------CeEEEEe
Q psy16020 25 QGRVVCALADG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RS-LAAV-Y-NKVWCGYK---------NKIHVVD 87 (151)
Q Consensus 25 ~~~v~vgl~nG---~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV--~~-m~~v-~-~~Lw~g~~---------n~I~vid 87 (151)
++++|+-.+.+ .+.+|+... ..|..-.+ .+....|- .+ +.+. + ++||+-.| +.+++||
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t-~~W~~~~~----~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd 574 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTE-EIFKDVTP----KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFK 574 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTT-TEEEECCC----SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEE
T ss_pred CCEEEEECCCCCCCCEEEEECCC-CceEEccC----CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEE
Confidence 77777765432 688887643 45632111 11100111 12 2322 2 67776443 4699999
Q ss_pred CCCCcE-----EEEEEecCCCCCceeEEEEeC-CEEEEEEcC--------CCeEEEEeCCccce
Q psy16020 88 PKSLVV-----LKSFDAHPRRESQVRQMTWAG-DGVWVSIRL--------DSTLRMYNAHTYQH 137 (151)
Q Consensus 88 ~~t~~i-----~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~--------d~~l~lwd~~t~~~ 137 (151)
+++.+- ...+...+.....=+.++..+ +.+++.++. ...+.+||..+.+=
T Consensus 575 ~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 575 YDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp ECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred ccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 998771 233322211112233444556 788887774 45699999987554
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=63.74 E-value=48 Score=25.52 Aligned_cols=101 Identities=18% Similarity=0.261 Sum_probs=58.0
Q ss_pred ceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeCC-----EEEEEeC-------Ce
Q psy16020 17 TALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVYN-----KVWCGYK-------NK 82 (151)
Q Consensus 17 ~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~~-----~Lw~g~~-------n~ 82 (151)
....|.+. ++++||+..+|.|.+++ +|.. +....+++. ....-...|++..+ .||++.. ++
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~---~g~~--~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR---EGRL--STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE---TTEE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE---CCCc--cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 44566654 46899999999999998 2321 111111111 11234567888754 8999884 78
Q ss_pred EEEEeCCCCcE------EEEEEecCCCCCceeEEEEeCCE-EEEEEc
Q psy16020 83 IHVVDPKSLVV------LKSFDAHPRRESQVRQMTWAGDG-VWVSIR 122 (151)
Q Consensus 83 I~vid~~t~~i------~~~~~~h~~~~~~I~~m~~~~~~-vwis~~ 122 (151)
|..++....++ ...+..+.........|++.++| +|++..
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 99998775432 11122111122345678887665 476654
No 323
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=62.53 E-value=12 Score=32.76 Aligned_cols=35 Identities=14% Similarity=0.304 Sum_probs=30.1
Q ss_pred CceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEE
Q psy16020 63 HSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSF 97 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~ 97 (151)
.+++.|++.+++||+|..|.||.+|..+++.+...
T Consensus 29 ~~~~~l~~d~~~lyVGA~n~ly~L~~~~L~~~~~~ 63 (727)
T 2uzx_B 29 TPIQNVILHEHHIFLGATNYIYVLNEEDLQKVAEY 63 (727)
T ss_dssp SCEEEEEEETTEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CceeeEEEECCEEEEEeccEEEEeChhhcccccee
Confidence 68999999889999999999999998777766544
No 324
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=62.11 E-value=13 Score=31.35 Aligned_cols=60 Identities=12% Similarity=0.066 Sum_probs=40.2
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCC-CcceEEEeCCCCCceE-EEeee--CCEEEEEeCCeEEEEeC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDL-SKYHTVTLGLPHHSVR-SLAAV--YNKVWCGYKNKIHVVDP 88 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~-~~~~~i~l~~~~~pV~-~m~~v--~~~Lw~g~~n~I~vid~ 88 (151)
-+|+|..+|.|.-.....+. .. .....+.+.....||. .|.+. .+.||++++++|.-+-.
T Consensus 415 V~flGT~~G~l~KV~l~~~~--~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kvpl 478 (539)
T 3al9_A 415 VVFVGTKSGKLKKIRADGPP--HGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVPV 478 (539)
T ss_dssp EEEEEETTSEEEEEEEEETT--TEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEES
T ss_pred EEEEEcCCCeEEEEEeCCCC--ccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccceeeh
Confidence 39999999998776543211 11 1234566764358994 88885 36799999998776644
No 325
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=62.07 E-value=31 Score=29.03 Aligned_cols=60 Identities=17% Similarity=0.218 Sum_probs=41.1
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCce-EEEeee--CCEEEEEeCCeEEEEeCC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAV--YNKVWCGYKNKIHVVDPK 89 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV-~~m~~v--~~~Lw~g~~n~I~vid~~ 89 (151)
-+|+|..+|.|.-.-...++ .......+.+. ..+|| +.|.+. ...||++++.+|.=+...
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~--~~~~~ee~~v~-~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vpl~ 464 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGS--DGHPYSTQSIQ-QGSAVSRDLTFDGTFEHLYVMTQSTLLKVPVA 464 (528)
T ss_dssp EEEEEETTSEEEEEECSSSC--CSCCSEEEESS-TTSCCCSCCEECTTSSEEEEECSSCEEEEESC
T ss_pred EEEEECCCCeEEEEEEcCCC--CeeEEeeeccC-CCCcceeeEEEecCCCEEEEEeCCEEEEEEhh
Confidence 38999999998876654322 12244566773 35899 588875 467999999877666443
No 326
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=61.76 E-value=42 Score=25.90 Aligned_cols=68 Identities=10% Similarity=0.036 Sum_probs=44.3
Q ss_pred CceEEEeee-CCEEEEEeC-CeEEEEeCCCCcEE--EEEEecCCCCCceeEEEEeCC-----EEEEEEcCC-----CeEE
Q psy16020 63 HSVRSLAAV-YNKVWCGYK-NKIHVVDPKSLVVL--KSFDAHPRRESQVRQMTWAGD-----GVWVSIRLD-----STLR 128 (151)
Q Consensus 63 ~pV~~m~~v-~~~Lw~g~~-n~I~vid~~t~~i~--~~~~~h~~~~~~I~~m~~~~~-----~vwis~~~d-----~~l~ 128 (151)
.| +.|++. +++||++.. ++|++++ +++.. ..+............|++.++ .+|++-... +.|.
T Consensus 32 ~P-~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VP-WALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CE-EEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred Cc-eEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 44 467765 467999985 7999998 44432 112222223457889999976 778887654 6677
Q ss_pred EEeCC
Q psy16020 129 MYNAH 133 (151)
Q Consensus 129 lwd~~ 133 (151)
.|+..
T Consensus 109 r~~~~ 113 (352)
T 2ism_A 109 RLRHL 113 (352)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77765
No 327
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=61.59 E-value=21 Score=30.87 Aligned_cols=57 Identities=11% Similarity=0.048 Sum_probs=37.5
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--C--CEEEEEeCCeEEEE
Q psy16020 27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--Y--NKVWCGYKNKIHVV 86 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~--~~Lw~g~~n~I~vi 86 (151)
-+|+|+.+|.|.-.-....+ ......+.+-.+.+||+.|.+. . ..||++++++|.-+
T Consensus 417 V~flGT~~G~l~Kvv~~~~~---~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHA---VHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSS---EEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCC---ceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 39999999998665432211 1122334454445899999885 3 66999998876554
No 328
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=60.90 E-value=48 Score=24.54 Aligned_cols=120 Identities=11% Similarity=0.022 Sum_probs=68.2
Q ss_pred eeeeeCCCceeeeEEe-CCeEEEEecC--C-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEe--CC
Q psy16020 9 YPLNKILDTALPPVHV-QGRVVCALAD--G-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGY--KN 81 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~-~~~v~vgl~n--G-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~--~n 81 (151)
...+..+..+..|... ++++|++... + .|..|+.. +|. ......+... ..-..+.. .++.+|++. .+
T Consensus 65 ~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~----~~~~~~~~~~-~~~~g~~~~~~~~~~v~d~~~g 138 (306)
T 2p4o_A 65 QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGT----VETLLTLPDA-IFLNGITPLSDTQYLTADSYRG 138 (306)
T ss_dssp EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSC----EEEEEECTTC-SCEEEEEESSSSEEEEEETTTT
T ss_pred EEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCe----EEEEEeCCCc-cccCcccccCCCcEEEEECCCC
Confidence 3344566677777765 4579988743 2 36666542 232 1112233221 11133332 356788776 46
Q ss_pred eEEEEeCCCCcEEEEEE-e------cCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020 82 KIHVVDPKSLVVLKSFD-A------HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~-~------h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t 134 (151)
+||++|+.+++..-... . ........+.|...+..+|++-...+.|..||...
T Consensus 139 ~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 139 AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCT
T ss_pred eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCC
Confidence 99999998764221111 0 00112245666556778999999999999999864
No 329
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=58.93 E-value=14 Score=31.76 Aligned_cols=111 Identities=9% Similarity=0.044 Sum_probs=56.5
Q ss_pred ceeeeEEe--CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee--eCCEEEEEe--CCeEEEEeCC
Q psy16020 17 TALPPVHV--QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA--VYNKVWCGY--KNKIHVVDPK 89 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~--v~~~Lw~g~--~n~I~vid~~ 89 (151)
.+..|.+. .++||++- .++.|.+++......- ......+..+. ..| ..|++ .++.||.+- .++|+++|++
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~-~~~~~~i~~~~-~~P-~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-SSYDTVISRDI-QAP-DGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC--CCCCCBCCSCC---C-CCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCC-cceEEEEeCCC-CCc-ceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 45566665 56888874 4578888876521000 00111111111 122 34555 357787775 3689999988
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCC-CeEEEEeCC
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLD-STLRMYNAH 133 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d-~~l~lwd~~ 133 (151)
.......+... ....+.+++++ ..+|++-... +.|..++..
T Consensus 484 g~~~~~l~~~~---~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 484 GVKRKTLFREQ---GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp SCCEEEECCCS---SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred CCceEEEEeCC---CCCcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 65544333211 23456666653 3344443332 667766654
No 330
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=57.20 E-value=89 Score=26.44 Aligned_cols=117 Identities=12% Similarity=0.031 Sum_probs=70.7
Q ss_pred ceeeeEEe--CCeEEEEecCCcE-EEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC
Q psy16020 17 TALPPVHV--QGRVVCALADGSV-AIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK 89 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~nG~l-~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~ 89 (151)
.+..|... .+++|.+-....- .|++...+|. ....+--..-..| +.|++- +++||.+-. ++|..+|.+
T Consensus 433 ~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~----~~~~l~~~~l~~P-~gla~D~~~~~LYw~D~~~~~I~~~~~d 507 (628)
T 4a0p_A 433 RPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT----EREVLFFSGLSKP-IALALDSRLGKLFWADSDLRRIESSDLS 507 (628)
T ss_dssp CEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC----SCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC----CcEEEEeccCCCc-cEEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 34455544 3567766533221 3333333342 2222221111245 666664 478887764 689999986
Q ss_pred CCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i 141 (151)
. +-.+.+... .......|+..++.+|.+-.....|...|..+++....|
T Consensus 508 G-~~r~~~~~~--~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i 556 (628)
T 4a0p_A 508 G-ANRIVLEDS--NILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKV 556 (628)
T ss_dssp S-CSCEEEECS--SCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEE
T ss_pred C-CceEEEEcC--CCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEE
Confidence 4 333444421 234678899999999889999999999999987765555
No 331
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=56.22 E-value=66 Score=24.66 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=63.4
Q ss_pred eeeeEEe--CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC
Q psy16020 18 ALPPVHV--QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK 89 (151)
Q Consensus 18 V~~i~~~--~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~ 89 (151)
+..|.+. +++||++- .++.|..++.+ |. ....+ ..+. ..| ..|++- ++.||.+.. ++|.+++++
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~--g~----~~~~~~~~~~-~~p-~glavd~~~g~ly~~d~~~~~I~~~~~d 146 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLN--GS----NVEEVVSTGL-ESP-GGLAVDWVHDKLYWTDSGTSRIEVANLD 146 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT--SC----SCEEEECSSC-SCC-CEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecC--CC----CceEEEeCCC-CCc-cEEEEecCCCeEEEEcCCCCeEEEEcCC
Confidence 4555554 46787764 45667777653 21 12222 2222 133 566663 678877763 589999987
Q ss_pred CCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCC-CeEEEEeCCc
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLD-STLRMYNAHT 134 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d-~~l~lwd~~t 134 (151)
..... .+. . ......+.|+++ +..+|.+-... +.|..++...
T Consensus 147 G~~~~-~l~-~-~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 147 GAHRK-VLL-W-QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp SCSCE-EEE-C-TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCceE-EEE-e-CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 54432 232 1 123467889998 45667777776 8899888763
No 332
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=55.33 E-value=95 Score=26.24 Aligned_cols=114 Identities=11% Similarity=-0.015 Sum_probs=72.6
Q ss_pred ceeeeEEe--CCeEEEEec--CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020 17 TALPPVHV--QGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP 88 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~--nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~ 88 (151)
.+..|... .+.+|++-- ++.|..++. +|. ....+- ..-..| +.|++- +++||.+-. ++|..+|.
T Consensus 124 ~P~~iavdp~~G~lY~tD~g~~~~I~r~~~--dG~----~~~~l~-~~~~~P-~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 124 SPRALALDPAEGFMYWTEWGGKPKIDRAAM--DGS----ERTTLV-PNVGRA-NGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEET--TSC----SCEEEE-CSCSSE-EEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcccEEEccCCCeEEEeCCCCCCEEEEEeC--CCC----ceEEEE-CCCCCc-ceEEEccccCEEEEEECCCCEEEEEcC
Confidence 34556555 467777752 455555543 232 222221 121234 466664 588888873 68999998
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 142 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id 142 (151)
+.... +.+... ......|+..++.++.+-.....|...|..+++....|.
T Consensus 196 dG~~~-~v~~~~---l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 196 LGLNR-EVIADD---LPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp TSCSC-EEEEEC---CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCce-EEeecc---CCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 76544 334332 236678888999998899999999999998887666553
No 333
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=54.98 E-value=76 Score=24.99 Aligned_cols=65 Identities=14% Similarity=0.246 Sum_probs=40.5
Q ss_pred eeEEeC--CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-C-CEEEEEeC-C--eEEEEeCC
Q psy16020 20 PPVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-Y-NKVWCGYK-N--KIHVVDPK 89 (151)
Q Consensus 20 ~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~-~~Lw~g~~-n--~I~vid~~ 89 (151)
-|...+ +.+|++-+ .+.|.+|+...+|. +...+.+.++ ..-..|.+- + +.||+|+. + +|..+|++
T Consensus 225 Gia~spDg~~lYvadt~~~~I~~~~~~~~g~--l~~~~~~~~~---g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 225 GINISPDGKYVYIAELLAHKIHVYEKHANWT--LTPLRVLSFD---TLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECTTSC--EEEEEEEECS---SEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred cceECCCCCEEEEEeCCCCeEEEEEECCCCc--EecCEEEeCC---CCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 344443 36888864 57899999876553 3444555553 334666664 3 78999873 2 55555655
No 334
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=52.06 E-value=39 Score=24.56 Aligned_cols=73 Identities=18% Similarity=0.233 Sum_probs=49.1
Q ss_pred EEEeCCeEEEEeCCCCcEEEEEEec---CCCCCceeEEEEe--CCEEEEEE-------------cCCCeEEEEeCCccce
Q psy16020 76 WCGYKNKIHVVDPKSLVVLKSFDAH---PRRESQVRQMTWA--GDGVWVSI-------------RLDSTLRMYNAHTYQH 137 (151)
Q Consensus 76 w~g~~n~I~vid~~t~~i~~~~~~h---~~~~~~I~~m~~~--~~~vwis~-------------~~d~~l~lwd~~t~~~ 137 (151)
-++||..|.+-+..|+..+.+-... ....++|++-... .+..|+-- ..+..|||.|..|...
T Consensus 17 ~V~~Gs~VtL~h~~t~~~LHSH~~~yp~gS~qQqVT~y~~~~D~Nn~W~I~~~~~~~~~~~~~v~~gd~IRL~H~~T~~~ 96 (199)
T 3mal_A 17 EITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQHMKTRKW 96 (199)
T ss_dssp BCBTTCEEEEEETTTCCEEEEEEEECSSTTCCEEEEEECCSCCGGGCEEEECCTTSSCCTTSBCBTTCEEEEEETTTCCE
T ss_pred EEeeCCEEEEEECCCCCcceeCCccCCCCCCCEEEEeeCCCCCCCCEEEEEecCcCCcCCCcEeecCCEEEEEECCCCCC
Confidence 4578889999999998877765421 1123458876542 23457653 3478899999999888
Q ss_pred eeeEeCCcccc
Q psy16020 138 LQDVDIEPYVS 148 (151)
Q Consensus 138 l~~idi~~~v~ 148 (151)
|..=++++++.
T Consensus 97 LhSH~~~~P~s 107 (199)
T 3mal_A 97 LHSHLHASPIS 107 (199)
T ss_dssp EEEEEEECTTT
T ss_pred EeECCcCCCCC
Confidence 87766665543
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=50.14 E-value=1.2e+02 Score=25.84 Aligned_cols=105 Identities=9% Similarity=0.010 Sum_probs=61.7
Q ss_pred eCCeEEEEecCC-----cEEEEEcCCCCCCCCCcceEEEeC----C-C-CCceEEEeee--CCEEEEEeC--------Ce
Q psy16020 24 VQGRVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLG----L-P-HHSVRSLAAV--YNKVWCGYK--------NK 82 (151)
Q Consensus 24 ~~~~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~~i~l~----~-~-~~pV~~m~~v--~~~Lw~g~~--------n~ 82 (151)
.++++|+.++.+ ++.+|+.. .+.|. .+.+. . + ...-.+++.+ +++||+-.| +.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~-~~~W~-----~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~d 469 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIH-YDKID-----MKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSD 469 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEEC-SSCEE-----EEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECC-CCeEE-----EeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCcccc
Confidence 567777766542 57777764 34563 23311 1 1 1223566777 889887643 46
Q ss_pred EEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCC--eEEEEeCCccc
Q psy16020 83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDS--TLRMYNAHTYQ 136 (151)
Q Consensus 83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~--~l~lwd~~t~~ 136 (151)
++++|+.+.+-.+. ..-+ ....=++++.. ++.+++.++.++ .+.+||..+.+
T Consensus 470 v~~yd~~t~~W~~~-~~~p-~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 470 NWIFDMKTREWSMI-KSLS-HTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp CEEEETTTTEEEEC-CCCS-BCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred EEEEeCCCCcEEEC-CCCC-CCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence 99999998654332 1111 11233445553 778888887655 68999988743
No 336
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=46.93 E-value=71 Score=27.15 Aligned_cols=62 Identities=6% Similarity=0.000 Sum_probs=36.7
Q ss_pred eEEEEecCCcEEEEEcCCCCCC-CCCc--ceEEEeCC---------CCCceEEEeee--CCEEEEEeCCeEEEEeC
Q psy16020 27 RVVCALADGSVAIFRRGPDGQW-DLSK--YHTVTLGL---------PHHSVRSLAAV--YNKVWCGYKNKIHVVDP 88 (151)
Q Consensus 27 ~v~vgl~nG~l~v~~~~~~~~w-d~~~--~~~i~l~~---------~~~pV~~m~~v--~~~Lw~g~~n~I~vid~ 88 (151)
-+|+|..+|.|.-.-...++.. ..+. ...+++.. ...||+.|.+. ...||+++...|.=+..
T Consensus 422 VlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~LYV~s~~~V~qVPl 497 (565)
T 3oky_B 422 VVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYVAFSTCVIKVPL 497 (565)
T ss_dssp EEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEEEEECSSCEEEEES
T ss_pred EEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEEEEEecCeEEEeeh
Confidence 3899999999864433222111 1111 12344432 13799999886 36799999887765544
No 337
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=46.82 E-value=97 Score=23.86 Aligned_cols=65 Identities=11% Similarity=0.080 Sum_probs=42.7
Q ss_pred EEEeee-CCEEEEEeC-CeEEEEeCCCCcEEEEEE---ecCCCCCceeEEEEeCC-----EEEEEEcC---C----CeEE
Q psy16020 66 RSLAAV-YNKVWCGYK-NKIHVVDPKSLVVLKSFD---AHPRRESQVRQMTWAGD-----GVWVSIRL---D----STLR 128 (151)
Q Consensus 66 ~~m~~v-~~~Lw~g~~-n~I~vid~~t~~i~~~~~---~h~~~~~~I~~m~~~~~-----~vwis~~~---d----~~l~ 128 (151)
+.|++. +++||++.. ++|+++|. +++ ..+. ...........|++.++ .+|++... + ..|.
T Consensus 32 ~~ia~~pdG~l~V~e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 32 WSIAPLGGGRYLVTERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp EEEEEEETTEEEEEETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred eEEEEcCCCeEEEEeCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 567765 678999985 79999974 555 3332 11223456888999875 67887653 3 5666
Q ss_pred EEeCC
Q psy16020 129 MYNAH 133 (151)
Q Consensus 129 lwd~~ 133 (151)
.|+..
T Consensus 109 r~~~~ 113 (354)
T 3a9g_A 109 RGRLD 113 (354)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 67654
No 338
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=45.61 E-value=1.3e+02 Score=25.14 Aligned_cols=69 Identities=6% Similarity=0.119 Sum_probs=47.2
Q ss_pred eeCCEEEEEeC-----CeEEEEeCCCCcE--EEEEEecCCCCCceeEEEEeCCEEEEEEcCCC--eEEEEeCCccceeee
Q psy16020 70 AVYNKVWCGYK-----NKIHVVDPKSLVV--LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS--TLRMYNAHTYQHLQD 140 (151)
Q Consensus 70 ~v~~~Lw~g~~-----n~I~vid~~t~~i--~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~--~l~lwd~~t~~~l~~ 140 (151)
..+++|++-+. .+|+++|.++++. .+.+..|.+ ..+ .+...++.+.++..+++ .|++||..+ .....
T Consensus 289 ~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g-~~~~~ 364 (693)
T 3iuj_A 289 NKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ--QVL-TVHSGSGYLFAEYMVDATARVEQFDYEG-KRVRE 364 (693)
T ss_dssp EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS--SCE-EEEEETTEEEEEEEETTEEEEEEECTTS-CEEEE
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC--CEE-EEEEECCEEEEEEEECCeeEEEEEECCC-CeeEE
Confidence 34688877662 4799999998764 356777754 244 77777888776776665 689999874 34455
Q ss_pred Ee
Q psy16020 141 VD 142 (151)
Q Consensus 141 id 142 (151)
|.
T Consensus 365 l~ 366 (693)
T 3iuj_A 365 VA 366 (693)
T ss_dssp EC
T ss_pred ee
Confidence 53
No 339
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=45.54 E-value=1.5e+02 Score=25.63 Aligned_cols=72 Identities=4% Similarity=-0.009 Sum_probs=46.0
Q ss_pred eEEEeee--CCEEEEEeCCeEEEEeCCCCcEEEEEEecC-----------------CCCCceeEEEEeCCEEEEEEcC--
Q psy16020 65 VRSLAAV--YNKVWCGYKNKIHVVDPKSLVVLKSFDAHP-----------------RRESQVRQMTWAGDGVWVSIRL-- 123 (151)
Q Consensus 65 V~~m~~v--~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~-----------------~~~~~I~~m~~~~~~vwis~~~-- 123 (151)
-+.|++- .++||+|..|.||-+|+.++...+.+.... +-...|.-|...+++-+++|+.
T Consensus 40 f~~LllD~~~g~LYVGArN~Ly~Ls~~~l~~~~~i~w~~~~~d~~~C~~kGk~~~~eC~NyikvL~~~~~~~LivCGTna 119 (667)
T 4gz8_A 40 YHTFLLDEERSRLYVGAKDHIFSFNLVNIKDFQKIVWPVSYTRRDECKWAGKDILKECANFIKVLEAYNQTHLYACGTGA 119 (667)
T ss_dssp BCEEEEETTTTEEEEECBSEEEEEETTCTTSEEEEECCCCHHHHHHHHHTTCCTTTTSSCBEEEEEEEETTEEEEEECCS
T ss_pred eEEEEEeCCCCEEEEEEECeEEEEchhhcccceEEecCCChhhHhhcccCCCCccccCCCeEEEEEECCCCeEEECCCCC
Confidence 4555554 489999999999999998877666654210 1123566665444433445543
Q ss_pred -CCeEEEEeCCccc
Q psy16020 124 -DSTLRMYNAHTYQ 136 (151)
Q Consensus 124 -d~~l~lwd~~t~~ 136 (151)
.+.....+....+
T Consensus 120 fqp~C~~~~l~~~~ 133 (667)
T 4gz8_A 120 FHPICTYIEVGHHP 133 (667)
T ss_dssp SSCEEEEEECCSSS
T ss_pred CCceEEEEECCCcc
Confidence 7888887776543
No 340
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=43.97 E-value=1.1e+02 Score=23.70 Aligned_cols=108 Identities=9% Similarity=-0.009 Sum_probs=62.3
Q ss_pred ceeeeEEe--CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC
Q psy16020 17 TALPPVHV--QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK 89 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~ 89 (151)
.+..|.+. +++||++- .++.|..++.+ |. ....+-......| ..|++- ++.||.+.. ++|.+++++
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~--g~----~~~~~~~~~~~~p-~glavd~~~g~lY~~d~~~~~I~~~~~d 189 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLN--GS----NVEEVVSTGLESP-GGLAVDWVHDKLYWTDSGTSRIEVANLD 189 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETT--SC----CEEEEECSSCSCC-CCEEEETTTTEEEEEETTTTEEEECBTT
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecC--CC----CcEEEEeCCCCCc-cEEEEEeCCCeEEEEcCCCCeEEEEeCC
Confidence 34455554 46777664 45667666653 21 1222211111133 455654 678877763 589999987
Q ss_pred CCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCC-CeEEEEeCCc
Q psy16020 90 SLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLD-STLRMYNAHT 134 (151)
Q Consensus 90 t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d-~~l~lwd~~t 134 (151)
.......+. . .......++++ +..+|.+-... +.|+.++...
T Consensus 190 g~~~~~l~~-~--~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 190 GAHRKVLLW-Q--SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp SCSCEEEEC-S--SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCceEEeec-C--CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 544333232 1 23467888888 44566677666 8899888764
No 341
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=42.50 E-value=1e+02 Score=22.98 Aligned_cols=110 Identities=11% Similarity=0.087 Sum_probs=63.1
Q ss_pred ceeeeEEe--CCeEEEEec-CCcEEEEEcCCCCCCCCCcceE-EEeCCCCCceEEEeee--CCEEEEEe--CCeEEEEeC
Q psy16020 17 TALPPVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHVVDP 88 (151)
Q Consensus 17 ~V~~i~~~--~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~-i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~vid~ 88 (151)
.+..+.+. ++++|++-. ++.|..++.+... ....... +.-+. ..| ..|++- ++.||.+. .++|.++|+
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~--~~~~~~~~~~~~~-~~p-~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAH--GVSSYDTVISRDI-QAP-DGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC----------CEEEECSSC-SCC-CEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCC--CCcccEEEEeCCC-CCc-CEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 45566665 467887754 5788888764210 0011122 21121 134 677774 67888775 368999998
Q ss_pred CCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCC-CeEEEEeCC
Q psy16020 89 KSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLD-STLRMYNAH 133 (151)
Q Consensus 89 ~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d-~~l~lwd~~ 133 (151)
+......-+.. .......+++++ ..+|.+-... +.|..++..
T Consensus 107 ~g~~~~~~~~~---~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 107 KGVKRKTLFRE---NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp TSSSEEEEEEC---TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCceEEEEEC---CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 86544333332 124678888873 4455555444 788888765
No 342
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=41.41 E-value=50 Score=28.70 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=29.9
Q ss_pred CceEEEeeeC--CEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16020 63 HSVRSLAAVY--NKVWCGYKNKIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 63 ~pV~~m~~v~--~~Lw~g~~n~I~vid~~t~~i~~~~~ 98 (151)
.|++.|++.+ ++||+|.-|+||.+++ +++.+....
T Consensus 17 t~~~hl~~d~~tg~vYvGavN~lyqL~~-~L~~~~~~~ 53 (681)
T 3oky_A 17 WTFNHLTVHRRTGAVYVGAINRVYKLTG-NLTIQVAHK 53 (681)
T ss_dssp SCEEEEEECTTTCCEEEEETTEEEEECT-TCCEEEEEE
T ss_pred CceEEEEEcCCCCcEEEeEEEEEEEcCc-ccceeeeEe
Confidence 6899888864 7899999999999987 788887765
No 343
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=40.37 E-value=55 Score=27.49 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=29.4
Q ss_pred CCceEEEeeeC--CEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16020 62 HHSVRSLAAVY--NKVWCGYKNKIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 62 ~~pV~~m~~v~--~~Lw~g~~n~I~vid~~t~~i~~~~~ 98 (151)
..+++.|++-+ ++||+|..|.||.+++ +++.+....
T Consensus 16 ~t~~~~l~~d~~~g~lyVGA~N~ly~Ls~-~L~~~~~~~ 53 (528)
T 3ol2_B 16 GTYLQHLARDPTSGTLYLGATNFLFQLSP-GLQLEATVS 53 (528)
T ss_dssp TCCEEEEEECTTTCCEEEEETTEEEEECT-TCCEEEEEE
T ss_pred CCCeEEEEEcCCCCEEEEEEEeeEEEcCC-CcccceEec
Confidence 36899888864 7899999999999996 788776654
No 344
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=36.68 E-value=24 Score=26.66 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=49.3
Q ss_pred EEEeCCC-CCceEEEeee-CCEEEEEeCCeEEEEeCCCCcE------EEEEEecCCCCCceeEEEEeCCEEEEEEcCCCe
Q psy16020 55 TVTLGLP-HHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVV------LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDST 126 (151)
Q Consensus 55 ~i~l~~~-~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i------~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~ 126 (151)
..++|.. =..++.|++. ++.||+...+++|-+++.+.+. .+.+--+ .-..=..+.+.++|.+... .|+.
T Consensus 32 a~~iG~~gw~~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~--Gw~~F~a~~fD~~G~LYav-~dG~ 108 (236)
T 1tl2_A 32 ATLIGKGGWSNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNG--GWNQFQFLFFDPNGYLYAV-SKDK 108 (236)
T ss_dssp SEEEESSSCTTCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECS--CGGGCSEEEECTTSCEEEE-ETTE
T ss_pred ccccCccccccceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEeccc--ccccceEEEECCCCCEEEe-CCCE
Confidence 4455542 1577899998 5789998778999999877332 2222110 0011267778888886666 6689
Q ss_pred EEEEeCC
Q psy16020 127 LRMYNAH 133 (151)
Q Consensus 127 l~lwd~~ 133 (151)
|+-+|.-
T Consensus 109 iyr~~pP 115 (236)
T 1tl2_A 109 LYKASPP 115 (236)
T ss_dssp EEEESCC
T ss_pred EEEeCCC
Confidence 9888874
No 345
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=35.88 E-value=1.4e+02 Score=22.85 Aligned_cols=51 Identities=18% Similarity=0.243 Sum_probs=33.0
Q ss_pred CCEEEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEc
Q psy16020 72 YNKVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIR 122 (151)
Q Consensus 72 ~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~ 122 (151)
.+.++++. +++|..++.+.++.......-++....+..|+..++| +|++..
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 37888887 4789999888766544322211222468888888765 677644
No 346
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=35.84 E-value=1.6e+02 Score=23.24 Aligned_cols=109 Identities=7% Similarity=-0.015 Sum_probs=65.7
Q ss_pred ceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-----C-eEEE
Q psy16020 17 TALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-----N-KIHV 85 (151)
Q Consensus 17 ~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-----n-~I~v 85 (151)
.+..|... +++||++-..+.|.+|+... + ....+......-+.|++. ++.||++.. + .+++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~-~-------~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEK-E-------YVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTT-T-------EEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCC-C-------EEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 34555555 46899998777888887541 1 111221111334566664 356998874 2 4777
Q ss_pred EeCCC-CcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccce
Q psy16020 86 VDPKS-LVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQH 137 (151)
Q Consensus 86 id~~t-~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~ 137 (151)
++.+. +...+.+... ...+.+++.+ ..+|++-...+.|+.||..+.+.
T Consensus 210 ~~~~g~~~~~~~l~~~----~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 210 LTRESGFKVITELTKG----QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp EEGGGTSCSEEEEEEC----SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred EeCCCceeeeeeeccC----CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 77653 2222344422 2456677775 45688888899999999986654
No 347
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=35.65 E-value=81 Score=26.04 Aligned_cols=36 Identities=22% Similarity=0.445 Sum_probs=27.4
Q ss_pred CCceEEEeee-----CCEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16020 62 HHSVRSLAAV-----YNKVWCGYKNKIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 62 ~~pV~~m~~v-----~~~Lw~g~~n~I~vid~~t~~i~~~~~ 98 (151)
..||..+... ++.||+|..|+||.+|. +++.+....
T Consensus 11 ~~~i~n~~~l~ld~~~~~lYVGA~n~ly~L~~-~L~~~~~~~ 51 (527)
T 4fww_A 11 GGLVQAMVTYEGDRNESAVFVAIRNRLHVLGP-DLKSVQSLA 51 (527)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEETTEEEEECT-TSCEEEEEE
T ss_pred CCcceeEEEEEEcCCCCEEEEEEeceEEEeCC-CcceeeEEE
Confidence 3677765553 36899999999999985 577777664
No 348
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=35.36 E-value=75 Score=27.92 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=31.1
Q ss_pred CceEEEeeeCCEEEEEeCC-eEEEEeCCCCcEEEEEEe
Q psy16020 63 HSVRSLAAVYNKVWCGYKN-KIHVVDPKSLVVLKSFDA 99 (151)
Q Consensus 63 ~pV~~m~~v~~~Lw~g~~n-~I~vid~~t~~i~~~~~~ 99 (151)
.-|.|+.+-+..||+=|.+ ++++||.+|+++..+...
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4577777777899999965 899999999999988776
No 349
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=34.36 E-value=67 Score=26.89 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=28.0
Q ss_pred CceEEEeee--CCEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16020 63 HSVRSLAAV--YNKVWCGYKNKIHVVDPKSLVVLKSFD 98 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~n~I~vid~~t~~i~~~~~ 98 (151)
.+++.|++. .++||+|..|.||.+|. +++.+....
T Consensus 18 ~~~~~l~~d~~~g~lyvGA~n~ly~Ls~-~L~~~~~~~ 54 (539)
T 3al9_A 18 WTFNHLTVHRRTGAVYVGAINRVYKLTG-NLTIQVAHK 54 (539)
T ss_dssp SCEEEEEECTTTCCEEEEETTEEEEECT-TCCEEEEEE
T ss_pred ccEEEEEEeCCCCEEEEEEeeeEEECCC-Ccccccccc
Confidence 358888886 57899999999999996 777666543
No 350
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=31.88 E-value=1.7e+02 Score=22.34 Aligned_cols=103 Identities=13% Similarity=0.284 Sum_probs=56.1
Q ss_pred ceeeeEEe-CCe-EEEEecCCcEEEEEcCCCCCCC--CC-cceEEEeCCCCCceEEEeee-----CCEEEEEeC------
Q psy16020 17 TALPPVHV-QGR-VVCALADGSVAIFRRGPDGQWD--LS-KYHTVTLGLPHHSVRSLAAV-----YNKVWCGYK------ 80 (151)
Q Consensus 17 ~V~~i~~~-~~~-v~vgl~nG~l~v~~~~~~~~wd--~~-~~~~i~l~~~~~pV~~m~~v-----~~~Lw~g~~------ 80 (151)
....|.+. +++ +||+..+|.|.+++.+ |... +. .+....-+ ..-...|++. ++.||+++.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g--~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG--KGLSAPLSGVPDVWAHG--QGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT--TEECCCCBSCCCCCCST--TCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC--CceeeEecCCcccccCC--CCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 34556654 457 9999999999999742 3211 11 11010111 1344677876 478999862
Q ss_pred ---CeEEEEeCCCC--cE--EEE-EEecC---CCCCceeEEEEeCCE-EEEEEcC
Q psy16020 81 ---NKIHVVDPKSL--VV--LKS-FDAHP---RRESQVRQMTWAGDG-VWVSIRL 123 (151)
Q Consensus 81 ---n~I~vid~~t~--~i--~~~-~~~h~---~~~~~I~~m~~~~~~-vwis~~~ 123 (151)
++|..++.+.. ++ .+. +..-+ .....-..|++.++| +|++...
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 36887765432 22 222 22211 112235678888665 4777654
No 351
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=30.46 E-value=2.6e+02 Score=23.99 Aligned_cols=71 Identities=7% Similarity=0.085 Sum_probs=44.8
Q ss_pred EEeee--CCEEEEEeCCeEEEEeCCCCcEEEEE---Ee---------------cCCCCCceeEEEEeCCEEEEEEcC---
Q psy16020 67 SLAAV--YNKVWCGYKNKIHVVDPKSLVVLKSF---DA---------------HPRRESQVRQMTWAGDGVWVSIRL--- 123 (151)
Q Consensus 67 ~m~~v--~~~Lw~g~~n~I~vid~~t~~i~~~~---~~---------------h~~~~~~I~~m~~~~~~vwis~~~--- 123 (151)
.|++- .++||+|..|.||.+|+.+++.+... .+ .++-...|.-|...+++-+++|+.
T Consensus 31 ~l~ld~~~~~lyVGArn~ly~L~~~~l~~~~~~~~w~~~~~~~~~C~~~gk~~~~dc~N~i~vL~~~~~~~L~~CGTna~ 110 (663)
T 1olz_A 31 ALLLSEDKDTLYIGAREAVFAVNALNISEKQHEVYWKVSEDKKAKCAEKGKSKQTECLNYIRVLQPLSATSLYVCGTNAF 110 (663)
T ss_dssp EEEECTTSSEEEEEEBTEEEEEETTEEEEEEEEEECCCCHHHHHHHHHTTCCTTTTSSCBEEEEEECSSSEEEEEECTTT
T ss_pred EEEEcCCCCEEEEeecceEEEecCccccchhheeeccCChhhhhhccCCCCCCccccceeEEEEEEcCCCeEEEeeccCC
Confidence 55554 47999999999999998777654432 11 112234677776553433445543
Q ss_pred CCeEEEEeCCccce
Q psy16020 124 DSTLRMYNAHTYQH 137 (151)
Q Consensus 124 d~~l~lwd~~t~~~ 137 (151)
.+.....+...++.
T Consensus 111 qp~C~~~~l~~~~~ 124 (663)
T 1olz_A 111 QPACDHLNLTSFKF 124 (663)
T ss_dssp SCEEEEEETTTTEE
T ss_pred CcEEEEeecCcccc
Confidence 77888877776554
No 352
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=29.75 E-value=40 Score=22.49 Aligned_cols=18 Identities=11% Similarity=0.307 Sum_probs=16.0
Q ss_pred eEEEEeCCCCcEEEEEEe
Q psy16020 82 KIHVVDPKSLVVLKSFDA 99 (151)
Q Consensus 82 ~I~vid~~t~~i~~~~~~ 99 (151)
.|.|+|.+|+++.|++..
T Consensus 70 vVkVvD~~TgEVIRqIPp 87 (117)
T 2hc5_A 70 YVKVIEDSTNEVIREIPP 87 (117)
T ss_dssp EEEEEETTTTEEEEEECH
T ss_pred EEEEEECCCCcEEEeCCh
Confidence 589999999999999873
No 353
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=27.96 E-value=2.5e+02 Score=23.09 Aligned_cols=83 Identities=13% Similarity=0.272 Sum_probs=53.8
Q ss_pred cceEEEeCC--CCCceEEEeeeC-CEEEEEeC-CeEEEEeCCCCc------------EEEEEEecCC---CCCceeEEEE
Q psy16020 52 KYHTVTLGL--PHHSVRSLAAVY-NKVWCGYK-NKIHVVDPKSLV------------VLKSFDAHPR---RESQVRQMTW 112 (151)
Q Consensus 52 ~~~~i~l~~--~~~pV~~m~~v~-~~Lw~g~~-n~I~vid~~t~~------------i~~~~~~h~~---~~~~I~~m~~ 112 (151)
.++.+++.. ....|+-+.+.. +.+-|=+| ..|.|+...... ..+++...+. ....|..+.+
T Consensus 53 ~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlW 132 (452)
T 3pbp_A 53 LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLF 132 (452)
T ss_dssp SCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEE
T ss_pred cceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEe
Confidence 567788763 234677777764 44444444 688888866211 1345555432 1356888888
Q ss_pred eCCE----EEEEEcCCCeEEEEeCCc
Q psy16020 113 AGDG----VWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 113 ~~~~----vwis~~~d~~l~lwd~~t 134 (151)
-+-+ -++..-.|+.||+||...
T Consensus 133 HPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 133 HPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccccCCCCeEEEEecCCEEEEEEccc
Confidence 7443 278899999999999995
No 354
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=27.23 E-value=81 Score=26.12 Aligned_cols=71 Identities=6% Similarity=0.036 Sum_probs=43.9
Q ss_pred CceEEEeee--CCEEEEEeCCeEEEEeCCCCcEEEEEE--ec-----------CCC----CCceeEEEEeCCEEEEEEcC
Q psy16020 63 HSVRSLAAV--YNKVWCGYKNKIHVVDPKSLVVLKSFD--AH-----------PRR----ESQVRQMTWAGDGVWVSIRL 123 (151)
Q Consensus 63 ~pV~~m~~v--~~~Lw~g~~n~I~vid~~t~~i~~~~~--~h-----------~~~----~~~I~~m~~~~~~vwis~~~ 123 (151)
...+.|++- .++||+|..|.||.+|..+++...... +- .+. ...|..|...+++-+++|+.
T Consensus 30 ~~~~~l~ld~~~~~lyVGa~n~ly~L~~~~l~~~~~~~w~~p~~d~~~C~~~gk~~~~~C~N~ikvL~~~~~~~L~~CGT 109 (495)
T 1q47_A 30 SSYHTFLLDEERSRLYVGAKDHIFSFNLVNIKDFQKIVWPVSYTRRDECKWAGKDILKECANFIKVLEAYNQTHLYACGT 109 (495)
T ss_dssp CCBCEEEEETTTTEEEEEEBTEEEEEESSCTTSEEEEECCCCHHHHHHHHHTTCCTTTTSSCBEEEEEECSSSEEEEEEC
T ss_pred cceEEEEEeCCCCEEEEEecCEEEEecccccccceeEEecCChhhhhhcccCCCCccccCcceEEEEEecCCCeEEEeec
Confidence 345566663 489999999999999988876555443 11 111 23455555434433445544
Q ss_pred ---CCeEEEEeCC
Q psy16020 124 ---DSTLRMYNAH 133 (151)
Q Consensus 124 ---d~~l~lwd~~ 133 (151)
.+..+.++..
T Consensus 110 ~a~~p~C~~~~l~ 122 (495)
T 1q47_A 110 GAFHPICTYIEVG 122 (495)
T ss_dssp CSSSCEEEEEECC
T ss_pred CCCCceEEEEecC
Confidence 7777777763
No 355
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=26.75 E-value=3.1e+02 Score=23.62 Aligned_cols=123 Identities=10% Similarity=0.072 Sum_probs=64.5
Q ss_pred eeeeeCCCceeeeEEeCCeEEEEe-----------cCCcEEEEEcCCC--CCCCCCcceEEEeCCCCCceEEEeeeCCEE
Q psy16020 9 YPLNKILDTALPPVHVQGRVVCAL-----------ADGSVAIFRRGPD--GQWDLSKYHTVTLGLPHHSVRSLAAVYNKV 75 (151)
Q Consensus 9 l~~i~l~~~V~~i~~~~~~v~vgl-----------~nG~l~v~~~~~~--~~wd~~~~~~i~l~~~~~pV~~m~~v~~~L 75 (151)
+..+.+|....-+-+.++++|+-+ .+|.|++++.... |.-+-...+.+-.......+..+...++.|
T Consensus 283 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 362 (711)
T 4hvt_A 283 LQKINMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRV 362 (711)
T ss_dssp EEECCSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCE
T ss_pred ceEeecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEE
Confidence 344555533222456788888854 4788999987531 000001112222222346777777777887
Q ss_pred EEEe-C---CeEEEEeCCCCcE-EEE-EEecCCCCCceeEEEEe--CCEEEEEEc---CCCeEEEEeCC
Q psy16020 76 WCGY-K---NKIHVVDPKSLVV-LKS-FDAHPRRESQVRQMTWA--GDGVWVSIR---LDSTLRMYNAH 133 (151)
Q Consensus 76 w~g~-~---n~I~vid~~t~~i-~~~-~~~h~~~~~~I~~m~~~--~~~vwis~~---~d~~l~lwd~~ 133 (151)
++.. . .+++++|..+++. .+. +. -+. ...+...... ++.++++.+ .-+.+..+|..
T Consensus 363 ~~~~~~~~~~~l~~~~~~~g~~~~~~~i~-lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 363 FLATYDNVVAKVVTFTLENEQWTKPVVLK-LPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEETTEEEEEEECEETTEECCCEEEC-CCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCEEEEEEEECCCCceEEEeccC-CCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 7665 2 3799999877752 233 32 111 1234333322 344554443 34667777765
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=25.49 E-value=1.5e+02 Score=25.52 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=49.8
Q ss_pred CEEEEEeC--CeEEEEeCCCCc---------EEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcc-----
Q psy16020 73 NKVWCGYK--NKIHVVDPKSLV---------VLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTY----- 135 (151)
Q Consensus 73 ~~Lw~g~~--n~I~vid~~t~~---------i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~----- 135 (151)
..+.++.. +++.|+|.+.++ ......+...-.....+..+++.|. +.|.--|+.|--|+..+.
T Consensus 335 kyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~ 414 (638)
T 3sbq_A 335 KYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYK 414 (638)
T ss_dssp CEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHT
T ss_pred CEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhc
Confidence 55666663 689999987532 1222333333344677788987776 899999999999999875
Q ss_pred -----ceeeeEeC
Q psy16020 136 -----QHLQDVDI 143 (151)
Q Consensus 136 -----~~l~~idi 143 (151)
..++.+|+
T Consensus 415 g~~~~~v~~k~dv 427 (638)
T 3sbq_A 415 GEKVNYIKQKLDV 427 (638)
T ss_dssp TCCCCCEEEEEEC
T ss_pred CccCCeeeecccc
Confidence 57777775
No 357
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=23.71 E-value=3.1e+02 Score=22.61 Aligned_cols=114 Identities=13% Similarity=0.054 Sum_probs=66.4
Q ss_pred eeeEEeC--CeEEEE-ecCCcEEEEEcC-------CCCCCCCCcc-------eEEEeCCCCCceEEEeee--CCEEEEEe
Q psy16020 19 LPPVHVQ--GRVVCA-LADGSVAIFRRG-------PDGQWDLSKY-------HTVTLGLPHHSVRSLAAV--YNKVWCGY 79 (151)
Q Consensus 19 ~~i~~~~--~~v~vg-l~nG~l~v~~~~-------~~~~wd~~~~-------~~i~l~~~~~pV~~m~~v--~~~Lw~g~ 79 (151)
..+..++ ++||++ ..+|.|..|+.. .+..|..-.+ ..+.++.. ..-+.|++. ++.||++-
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~-~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADP-SWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSS-SCCEEEEECTTSSEEEEEE
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCC-CCceEEEEcCCCCEEEEEe
Confidence 3444443 678865 467789999876 3334432111 33456542 333677776 35699996
Q ss_pred -C-CeEEEEeC--CCCcEE--EEEEecC------C------CCCcee-EEEEe--------CCEEEEEEcCCCeEEEEeC
Q psy16020 80 -K-NKIHVVDP--KSLVVL--KSFDAHP------R------RESQVR-QMTWA--------GDGVWVSIRLDSTLRMYNA 132 (151)
Q Consensus 80 -~-n~I~vid~--~t~~i~--~~~~~h~------~------~~~~I~-~m~~~--------~~~vwis~~~d~~l~lwd~ 132 (151)
+ ++|+.+|. .++.+. .++.+.. | ...... -+... ...+|++-.....||.++.
T Consensus 329 ~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 329 INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 3 58999654 455442 4555431 1 112344 34443 3467999999999999994
Q ss_pred C
Q psy16020 133 H 133 (151)
Q Consensus 133 ~ 133 (151)
.
T Consensus 409 ~ 409 (496)
T 3kya_A 409 E 409 (496)
T ss_dssp T
T ss_pred C
Confidence 3
No 358
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=22.86 E-value=59 Score=20.49 Aligned_cols=36 Identities=17% Similarity=0.080 Sum_probs=23.3
Q ss_pred CCCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEc
Q psy16020 2 EYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRR 42 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~ 42 (151)
|++..+.-+++.||..| ..+.+=+.+.||.|.|-=.
T Consensus 57 er~~g~f~R~~~LP~~v-----d~~~i~A~~~~GvL~I~lp 92 (102)
T 4fei_A 57 ERPSGRFVRELAFPEPV-----RPASGVASLAGGVLTVRFE 92 (102)
T ss_dssp CSEEEEEEEEEECSSCB-----CTTCCEEEEETTEEEEEEE
T ss_pred EEeccEEEEEEECCCCc-----chhHcEEEEECCEEEEEEE
Confidence 44555677788888765 2334556667887777543
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=22.50 E-value=3.5e+02 Score=23.10 Aligned_cols=55 Identities=16% Similarity=0.280 Sum_probs=38.2
Q ss_pred EEeee-CCEEEEEeC--------------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcC
Q psy16020 67 SLAAV-YNKVWCGYK--------------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRL 123 (151)
Q Consensus 67 ~m~~v-~~~Lw~g~~--------------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~ 123 (151)
.|.+- .+.||++.+ |.++.+|+.++++.+-+.+. ....++-+.++++ .++++...
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P--~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--IGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC--TTCEEEEEEECTTSSEEEEEEES
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC--CCccccCCEECCCCCEEEEEEeC
Confidence 44453 478999543 27999999999987766532 2356888888866 56777644
No 360
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=22.06 E-value=87 Score=19.38 Aligned_cols=34 Identities=18% Similarity=0.027 Sum_probs=21.9
Q ss_pred CCCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEE
Q psy16020 2 EYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIF 40 (151)
Q Consensus 2 ~~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~ 40 (151)
|+.....-+++.||..| ..+.+=+.+.||.|.|-
T Consensus 60 er~~g~f~r~~~LP~~v-----d~~~i~A~~~~GvL~I~ 93 (100)
T 3gla_A 60 ERRYGSFHRRFALPDSA-----DADGITAAGRNGVLEIR 93 (100)
T ss_dssp CCCCEEEEEEEECCTTB-----CTTSCEEEEETTEEEEE
T ss_pred eecceEEEEEEECCCCc-----ChHHeEEEEeCCEEEEE
Confidence 45555677788888764 23345566677877664
No 361
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=22.05 E-value=2.4e+02 Score=24.08 Aligned_cols=69 Identities=10% Similarity=0.122 Sum_probs=45.5
Q ss_pred EEeCCeEEEEeCCCCcEEEEEEec-CC--CCCceeEEEEeCCEEEEEE-------------cCCCeEEEEeCCccceeee
Q psy16020 77 CGYKNKIHVVDPKSLVVLKSFDAH-PR--RESQVRQMTWAGDGVWVSI-------------RLDSTLRMYNAHTYQHLQD 140 (151)
Q Consensus 77 ~g~~n~I~vid~~t~~i~~~~~~h-~~--~~~~I~~m~~~~~~vwis~-------------~~d~~l~lwd~~t~~~l~~ 140 (151)
+.+|+.|.+.+..|+..+++-... ++ ...+|++ ...+..|.-. ....+|||.|..|...|..
T Consensus 176 V~~Gd~V~L~~~~tg~~LHSh~~~yp~gS~qQqVt~--~D~Nn~W~I~~~~~~~~~~~~~Vk~GDvIRL~H~~T~~~LhS 253 (604)
T 3uj4_A 176 VVIGDKVVLNPVNAGQPLHASSHQLVDNPGANEVNS--VNANTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTA 253 (604)
T ss_dssp CBTTCEEEEEESSSCSCEEEEEEECSSSTTCEEEEE--SSCCCEEEEEEEECGGGCCTTBCBTTCEEEEEETTTTEEEEE
T ss_pred EeeCCEEEEEEcCCCCcEEeecccCCCCCCceEEEE--EcCCCeEEEEecCCCCcccCcccccCCEEEEEECCCCCCeec
Confidence 357888999998888776654321 11 2345775 3455567542 2367899999999988877
Q ss_pred EeCCccc
Q psy16020 141 VDIEPYV 147 (151)
Q Consensus 141 idi~~~v 147 (151)
=+++++.
T Consensus 254 H~~~~P~ 260 (604)
T 3uj4_A 254 DEHRKKQ 260 (604)
T ss_dssp EEETTEE
T ss_pred CCCCCCC
Confidence 6666553
No 362
>2l1s_A Uncharacterized protein YOHN; PFAM PF11776, DUF3315, JCSG, structural genomics, PSI-biolog protein structure initiative; NMR {Klebsiella pneumoniae subsp}
Probab=22.00 E-value=1.4e+02 Score=18.48 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=24.9
Q ss_pred CCEEEEEeCCeEEEEeCCCCcEEEEEEec
Q psy16020 72 YNKVWCGYKNKIHVVDPKSLVVLKSFDAH 100 (151)
Q Consensus 72 ~~~Lw~g~~n~I~vid~~t~~i~~~~~~h 100 (151)
.+.=|+-.++....++..|+.|.+-+.++
T Consensus 50 rGy~Wvrv~~dyvLVai~tG~I~~ii~g~ 78 (83)
T 2l1s_A 50 AGSHWTYMGGNYVLITDTEGKILKVYDGE 78 (83)
T ss_dssp TTEEEEECSSEEEEEETTTCBEEEEEEGG
T ss_pred CCCEEEEECCcEEEEECCCCeEEEEEecc
Confidence 46789999999999999999998887654
No 363
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=21.81 E-value=80 Score=21.54 Aligned_cols=37 Identities=16% Similarity=0.148 Sum_probs=26.7
Q ss_pred CCCCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEc
Q psy16020 1 MEYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRR 42 (151)
Q Consensus 1 ~~~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~ 42 (151)
+|++..+.-+++.||..|.. +.+=+.+.||.|.|-=.
T Consensus 99 ~Er~~g~F~R~~~LP~~vd~-----~~i~A~~~nGvL~I~lP 135 (151)
T 1gme_A 99 VERSSGKFVRRFRLLEDAKV-----EEVKAGLENGVLTVTVP 135 (151)
T ss_dssp CCCCCCCEEEEEECSSCCCG-----GGCEEEEETTEEEEEEE
T ss_pred EeEeccEEEEEEECCCCccc-----cceEEEEECCEEEEEEE
Confidence 36677788899999976543 35667778998887543
No 364
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=21.08 E-value=3.2e+02 Score=21.82 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=38.6
Q ss_pred CceEEEeee-CCEEEEEeC--CeEEEEeCCCCcEEEEEEec-----CCCCCceeEEEEe-----CCEEEEEEcC
Q psy16020 63 HSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLVVLKSFDAH-----PRRESQVRQMTWA-----GDGVWVSIRL 123 (151)
Q Consensus 63 ~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h-----~~~~~~I~~m~~~-----~~~vwis~~~ 123 (151)
.| +.|++. +++||++.. ++|+.++..+++........ .+.......|++. +..+|++.+.
T Consensus 28 ~P-~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 28 KP-HALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp SE-EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred Cc-eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 44 477775 578999985 47999988777754322211 1123457789998 4566777653
No 365
>2x8n_A CV0863; non-uniform sampling, multidimensional decomposition, abacus, fragment monte carlo, structural genomics; NMR {Chromobacterium violaceum atcc 12472}
Probab=20.96 E-value=1.2e+02 Score=19.81 Aligned_cols=27 Identities=26% Similarity=0.218 Sum_probs=23.0
Q ss_pred ceeeeEE--eCCeEEEEecCCcEEEEEcC
Q psy16020 17 TALPPVH--VQGRVVCALADGSVAIFRRG 43 (151)
Q Consensus 17 ~V~~i~~--~~~~v~vgl~nG~l~v~~~~ 43 (151)
.+.++.| .++.+++.|+||....+...
T Consensus 26 ~a~~V~~~~~~~~l~v~L~dGr~l~~Pl~ 54 (111)
T 2x8n_A 26 TLRSVQYRSEEGVIVFILANDRELKFRPD 54 (111)
T ss_dssp CEEEEEEETTTTEEEEEETTCCEEEECTT
T ss_pred eeEEEEEEccCCEEEEEECCCCEEEeeHH
Confidence 4667788 78899999999999999765
No 366
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=20.76 E-value=3e+02 Score=21.32 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=68.5
Q ss_pred eeCCCceeeeEEeCCeEEEEecCCcEEEEEc--CCCCCCCC----CcceEEEeCCCCCceEEEeeeCCE-EEEEeCCeEE
Q psy16020 12 NKILDTALPPVHVQGRVVCALADGSVAIFRR--GPDGQWDL----SKYHTVTLGLPHHSVRSLAAVYNK-VWCGYKNKIH 84 (151)
Q Consensus 12 i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~--~~~~~wd~----~~~~~i~l~~~~~pV~~m~~v~~~-Lw~g~~n~I~ 84 (151)
+.++..|..|..-..+.++=..||.|..|-. +..|+--. ..+..+++.. ..+|..++.-.++ +....+++||
T Consensus 123 v~~~~~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~-~~~i~~va~G~~hs~alt~~G~v~ 201 (423)
T 3mvd_K 123 IDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLME-GTVCCSIASGADHLVILTTAGKVF 201 (423)
T ss_dssp CCCSSCEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESST-TCCEEEEEECSSEEEEEETTSCEE
T ss_pred EcCCCCEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecC-CCcEEEEecCCCeEEEEecCCeEE
Confidence 4466788888877778777788999999975 54332111 1122233321 2566666655555 4444456788
Q ss_pred EEeCCC-CcE---------------------EEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020 85 VVDPKS-LVV---------------------LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 134 (151)
Q Consensus 85 vid~~t-~~i---------------------~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t 134 (151)
.|-... +|+ -..+. ......|..+........+....++.|..|=...
T Consensus 202 ~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~--~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~ 271 (423)
T 3mvd_K 202 TVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLI--ITRAKPFEAIWATNYCTFMRESQTQVIWATGLNN 271 (423)
T ss_dssp EEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEEC--CTTCCCEEEEEEETTEEEEEETTTCCEEEEEECT
T ss_pred EeeCCcCCccCCCcccccccccccccccccCCeEEe--ecCCccEEEEEECCcEEEEEECCCCeEEEEeCCC
Confidence 874321 111 11111 1123467777777666555557888888886443
Done!