Query psy16023
Match_columns 416
No_of_seqs 416 out of 2426
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 18:57:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16023.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16023hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0375|consensus 100.0 1E-117 2E-122 863.0 16.9 348 29-416 14-365 (517)
2 KOG0372|consensus 100.0 3.6E-80 7.9E-85 576.5 18.7 278 63-394 3-286 (303)
3 cd07416 MPP_PP2B PP2B, metallo 100.0 3.2E-77 6.8E-82 591.3 28.1 301 61-401 1-305 (305)
4 KOG0373|consensus 100.0 1.2E-72 2.6E-77 518.9 18.5 282 61-395 4-291 (306)
5 cd07417 MPP_PP5_C PP5, C-termi 100.0 7.5E-71 1.6E-75 547.4 25.4 285 64-402 17-313 (316)
6 cd07420 MPP_RdgC Drosophila me 100.0 6.4E-70 1.4E-74 540.4 25.1 276 61-390 5-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 5.2E-69 1.1E-73 527.9 25.0 278 63-394 2-285 (285)
8 PTZ00239 serine/threonine prot 100.0 7.7E-69 1.7E-73 529.9 25.6 280 63-395 3-288 (303)
9 KOG0374|consensus 100.0 3.3E-69 7.1E-74 536.5 21.3 264 76-392 32-302 (331)
10 PTZ00480 serine/threonine-prot 100.0 2.7E-68 5.8E-73 528.2 26.1 285 59-396 7-304 (320)
11 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 4E-67 8.8E-72 516.3 24.0 264 75-391 22-290 (293)
12 PTZ00244 serine/threonine-prot 100.0 8.4E-67 1.8E-71 513.8 24.9 265 75-392 24-293 (294)
13 smart00156 PP2Ac Protein phosp 100.0 7.9E-66 1.7E-70 502.7 24.5 264 76-392 1-269 (271)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 6.2E-65 1.3E-69 512.2 27.3 277 74-400 33-374 (377)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.8E-62 3.9E-67 487.5 24.0 267 75-391 20-310 (311)
16 KOG0371|consensus 100.0 4.6E-64 9.9E-69 471.3 11.7 275 68-396 25-305 (319)
17 KOG0377|consensus 100.0 7.5E-54 1.6E-58 425.4 11.7 283 58-394 116-433 (631)
18 KOG0376|consensus 100.0 4.1E-51 9E-56 413.8 14.2 284 64-401 171-466 (476)
19 cd00144 MPP_PPP_family phospho 100.0 6.5E-32 1.4E-36 254.6 18.3 212 106-379 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 3.1E-24 6.7E-29 207.0 11.3 122 103-226 1-146 (245)
21 TIGR00668 apaH bis(5'-nucleosy 99.9 1.6E-23 3.4E-28 204.3 10.6 129 103-236 1-136 (279)
22 cd07422 MPP_ApaH Escherichia c 99.9 1.8E-23 3.9E-28 202.8 10.0 127 105-236 1-134 (257)
23 cd07423 MPP_PrpE Bacillus subt 99.9 9.3E-23 2E-27 195.2 11.6 122 103-226 1-143 (234)
24 PRK00166 apaH diadenosine tetr 99.9 2.2E-22 4.7E-27 197.1 13.7 121 103-227 1-128 (275)
25 cd07413 MPP_PA3087 Pseudomonas 99.9 3E-22 6.5E-27 190.5 11.6 115 106-223 2-143 (222)
26 cd07425 MPP_Shelphs Shewanella 99.9 5.4E-22 1.2E-26 187.0 13.1 116 106-222 1-137 (208)
27 cd07421 MPP_Rhilphs Rhilph pho 99.8 5.9E-21 1.3E-25 186.8 11.8 130 104-234 3-224 (304)
28 PHA02239 putative protein phos 99.8 1.3E-20 2.9E-25 180.7 11.7 123 103-227 1-170 (235)
29 PRK11439 pphA serine/threonine 99.8 1.1E-20 2.5E-25 179.1 10.4 115 103-223 17-146 (218)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.8 1.3E-19 2.7E-24 170.3 11.3 118 103-226 1-133 (207)
31 PRK09968 serine/threonine-spec 99.8 1.8E-18 3.8E-23 164.2 10.6 115 103-223 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.1 1.2E-10 2.6E-15 100.0 8.2 75 103-177 1-81 (200)
33 PRK09453 phosphodiesterase; Pr 99.1 4E-10 8.8E-15 103.6 8.2 69 103-175 1-77 (182)
34 cd00841 MPP_YfcE Escherichia c 98.9 5.7E-09 1.2E-13 92.9 8.1 83 104-223 1-86 (155)
35 TIGR00040 yfcE phosphoesterase 98.8 1.2E-08 2.5E-13 91.6 7.5 63 103-174 1-64 (158)
36 PF12850 Metallophos_2: Calcin 98.8 1.5E-08 3.3E-13 89.3 7.7 61 103-175 1-61 (156)
37 COG0639 ApaH Diadenosine tetra 98.7 1.4E-08 2.9E-13 87.5 3.8 141 176-365 3-155 (155)
38 cd07397 MPP_DevT Myxococcus xa 98.6 7.6E-08 1.7E-12 92.6 8.3 111 104-224 2-159 (238)
39 cd07388 MPP_Tt1561 Thermus the 98.6 1.3E-07 2.9E-12 90.4 7.0 71 103-174 5-75 (224)
40 cd00838 MPP_superfamily metall 98.5 6.1E-07 1.3E-11 75.1 7.9 67 106-172 1-69 (131)
41 cd07379 MPP_239FB Homo sapiens 98.4 3.8E-07 8.3E-12 79.6 6.3 61 104-174 1-63 (135)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.3 1.3E-06 2.8E-11 79.3 6.0 65 105-175 1-66 (188)
43 cd07394 MPP_Vps29 Homo sapiens 98.2 5.7E-06 1.2E-10 76.3 8.8 59 104-174 1-65 (178)
44 cd07404 MPP_MS158 Microscilla 98.1 3.1E-06 6.7E-11 76.2 4.3 67 105-174 1-68 (166)
45 cd07385 MPP_YkuE_C Bacillus su 98.1 5.3E-06 1.1E-10 77.9 5.7 70 103-174 2-76 (223)
46 PRK11340 phosphodiesterase Yae 98.0 1E-05 2.2E-10 79.4 6.8 70 103-174 50-125 (271)
47 PRK05340 UDP-2,3-diacylglucosa 97.9 2.2E-05 4.8E-10 75.5 6.0 70 103-174 1-83 (241)
48 cd07403 MPP_TTHA0053 Thermus t 97.9 3.5E-05 7.6E-10 67.2 6.5 56 106-172 1-56 (129)
49 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.8 6.6E-05 1.4E-09 73.5 8.5 69 105-174 1-86 (262)
50 TIGR03729 acc_ester putative p 97.7 4.8E-05 1E-09 72.9 6.2 68 104-174 1-74 (239)
51 cd07391 MPP_PF1019 Pyrococcus 97.7 9.3E-05 2E-09 67.5 7.8 57 118-174 30-88 (172)
52 cd07400 MPP_YydB Bacillus subt 97.7 0.0001 2.2E-09 64.5 7.7 68 105-173 1-80 (144)
53 cd07390 MPP_AQ1575 Aquifex aeo 97.7 8.9E-05 1.9E-09 67.4 7.2 67 105-176 1-84 (168)
54 cd07396 MPP_Nbla03831 Homo sap 97.7 0.0001 2.2E-09 71.9 7.0 73 104-176 2-88 (267)
55 PHA02546 47 endonuclease subun 97.6 8.7E-05 1.9E-09 75.2 6.6 72 103-174 1-89 (340)
56 COG0622 Predicted phosphoester 97.6 0.00019 4.2E-09 66.0 7.4 101 103-236 2-105 (172)
57 TIGR00619 sbcd exonuclease Sbc 97.6 0.00013 2.8E-09 70.9 6.5 72 103-174 1-88 (253)
58 TIGR00024 SbcD_rel_arch putati 97.5 0.0003 6.6E-09 67.4 8.4 69 103-175 15-103 (225)
59 cd07402 MPP_GpdQ Enterobacter 97.5 0.0003 6.5E-09 66.7 7.1 67 104-174 1-83 (240)
60 TIGR01854 lipid_A_lpxH UDP-2,3 97.4 0.00021 4.7E-09 68.2 5.9 68 105-174 1-81 (231)
61 cd00840 MPP_Mre11_N Mre11 nucl 97.4 0.00026 5.5E-09 66.0 5.5 73 104-176 1-91 (223)
62 PRK11148 cyclic 3',5'-adenosin 97.4 0.00047 1E-08 67.5 7.3 71 102-174 14-98 (275)
63 PRK04036 DNA polymerase II sma 97.3 0.00028 6E-09 75.3 5.9 71 103-175 244-344 (504)
64 cd07383 MPP_Dcr2 Saccharomyces 97.3 0.00069 1.5E-08 63.0 6.8 70 103-172 3-87 (199)
65 cd08165 MPP_MPPE1 human MPPE1 97.2 0.00047 1E-08 62.2 5.3 48 128-175 37-90 (156)
66 cd07399 MPP_YvnB Bacillus subt 97.2 0.00076 1.6E-08 63.8 6.2 69 104-173 2-81 (214)
67 TIGR00583 mre11 DNA repair pro 97.1 0.00091 2E-08 69.5 6.8 73 103-175 4-124 (405)
68 PRK10966 exonuclease subunit S 97.1 0.0011 2.4E-08 68.9 6.8 71 103-174 1-87 (407)
69 cd07393 MPP_DR1119 Deinococcus 97.0 0.0014 3E-08 62.8 6.4 66 105-174 1-84 (232)
70 COG1409 Icc Predicted phosphoh 96.9 0.0026 5.7E-08 61.3 7.4 73 103-177 1-81 (301)
71 KOG0376|consensus 96.9 0.00034 7.4E-09 72.7 1.2 115 75-191 14-133 (476)
72 cd07398 MPP_YbbF-LpxH Escheric 96.9 0.0024 5.3E-08 59.5 6.6 69 106-175 1-83 (217)
73 cd07395 MPP_CSTP1 Homo sapiens 96.8 0.0033 7.2E-08 60.8 6.9 71 104-174 6-99 (262)
74 cd07401 MPP_TMEM62_N Homo sapi 96.7 0.003 6.5E-08 61.4 6.4 71 105-175 2-90 (256)
75 cd00839 MPP_PAPs purple acid p 96.7 0.0025 5.3E-08 62.5 5.9 70 103-176 5-83 (294)
76 cd07386 MPP_DNA_pol_II_small_a 96.6 0.0039 8.4E-08 59.9 5.8 67 106-174 2-94 (243)
77 cd07380 MPP_CWF19_N Schizosacc 96.5 0.0064 1.4E-07 54.8 6.5 66 106-172 1-68 (150)
78 cd07384 MPP_Cdc1_like Saccharo 96.5 0.0051 1.1E-07 56.3 5.7 49 127-175 43-101 (171)
79 cd08166 MPP_Cdc1_like_1 unchar 96.4 0.013 2.9E-07 54.9 7.8 47 128-174 41-93 (195)
80 COG4186 Predicted phosphoester 96.2 0.025 5.5E-07 51.1 8.4 44 128-175 44-87 (186)
81 COG2908 Uncharacterized protei 96.2 0.018 4E-07 55.3 7.8 98 107-222 2-115 (237)
82 COG2129 Predicted phosphoester 96.0 0.014 2.9E-07 55.8 6.2 74 102-176 3-79 (226)
83 COG0420 SbcD DNA repair exonuc 96.0 0.014 3E-07 60.1 6.5 73 103-175 1-89 (390)
84 cd08164 MPP_Ted1 Saccharomyces 95.9 0.018 4E-07 54.0 6.2 65 110-174 24-111 (193)
85 COG1407 Predicted ICC-like pho 95.8 0.023 5E-07 54.7 6.8 103 102-227 19-143 (235)
86 COG1408 Predicted phosphohydro 95.8 0.015 3.3E-07 57.7 5.5 71 103-175 45-119 (284)
87 PF14582 Metallophos_3: Metall 95.5 0.013 2.7E-07 56.2 3.7 72 103-174 6-102 (255)
88 cd00845 MPP_UshA_N_like Escher 95.5 0.02 4.4E-07 54.8 5.2 66 104-174 2-82 (252)
89 PF08321 PPP5: PPP5 TPR repeat 95.4 0.022 4.9E-07 47.4 4.4 38 64-101 58-95 (95)
90 cd08163 MPP_Cdc1 Saccharomyces 95.1 0.13 2.8E-06 50.2 9.4 45 129-173 45-96 (257)
91 PLN02533 probable purple acid 94.9 0.028 6.1E-07 58.9 4.5 70 103-175 140-212 (427)
92 KOG2863|consensus 94.5 0.089 1.9E-06 53.4 6.5 72 103-174 1-88 (456)
93 PF10500 SR-25: Nuclear RNA-sp 93.8 0.044 9.4E-07 52.0 2.7 10 71-80 155-164 (225)
94 cd07378 MPP_ACP5 Homo sapiens 93.8 0.1 2.2E-06 50.6 5.4 70 104-174 2-83 (277)
95 cd07410 MPP_CpdB_N Escherichia 93.7 0.069 1.5E-06 52.2 4.0 66 104-174 2-95 (277)
96 cd07412 MPP_YhcR_N Bacillus su 92.8 0.13 2.8E-06 51.0 4.3 66 104-174 2-88 (288)
97 cd07408 MPP_SA0022_N Staphyloc 92.7 0.17 3.7E-06 49.1 5.0 66 104-174 2-82 (257)
98 KOG3662|consensus 92.0 0.31 6.7E-06 50.6 6.0 56 118-173 81-143 (410)
99 PF06874 FBPase_2: Firmicute f 90.5 0.24 5.3E-06 53.6 3.7 44 129-177 184-227 (640)
100 cd07411 MPP_SoxB_N Thermus the 89.1 0.54 1.2E-05 45.7 4.7 64 105-174 3-95 (264)
101 cd00842 MPP_ASMase acid sphing 88.8 2.6 5.6E-05 41.4 9.4 73 104-176 39-124 (296)
102 cd07409 MPP_CD73_N CD73 ecto-5 87.6 1 2.2E-05 44.4 5.5 66 104-174 2-94 (281)
103 TIGR00282 metallophosphoestera 86.5 1.3 2.8E-05 43.7 5.5 67 103-174 1-71 (266)
104 COG1768 Predicted phosphohydro 86.5 0.3 6.5E-06 45.4 1.0 45 128-176 42-88 (230)
105 KOG1432|consensus 86.2 1.5 3.2E-05 44.6 5.7 49 127-175 98-148 (379)
106 KOG2476|consensus 86.0 1.8 4E-05 45.4 6.5 69 102-171 5-75 (528)
107 PRK09419 bifunctional 2',3'-cy 84.8 1 2.2E-05 53.1 4.5 66 104-174 662-736 (1163)
108 PF10500 SR-25: Nuclear RNA-sp 84.7 0.6 1.3E-05 44.4 2.1 14 115-128 165-178 (225)
109 KOG0918|consensus 83.7 0.088 1.9E-06 54.0 -4.1 99 128-232 46-148 (476)
110 PF04042 DNA_pol_E_B: DNA poly 82.6 1.9 4E-05 40.1 4.5 72 105-176 1-93 (209)
111 cd07406 MPP_CG11883_N Drosophi 79.9 3 6.5E-05 40.4 5.1 56 113-173 21-82 (257)
112 cd07405 MPP_UshA_N Escherichia 78.6 2.3 4.9E-05 42.0 3.8 66 104-174 2-87 (285)
113 cd07407 MPP_YHR202W_N Saccharo 76.4 2.8 6.1E-05 41.5 3.8 66 104-174 7-97 (282)
114 COG3855 Fbp Uncharacterized pr 76.3 1.9 4.2E-05 45.3 2.6 42 130-176 191-232 (648)
115 cd07382 MPP_DR1281 Deinococcus 76.0 5.9 0.00013 38.7 5.9 66 104-174 1-70 (255)
116 KOG3339|consensus 74.9 24 0.00052 33.1 9.0 85 131-220 40-140 (211)
117 PTZ00422 glideosome-associated 72.5 5.4 0.00012 41.5 4.8 72 103-174 27-109 (394)
118 KOG1378|consensus 71.8 4.6 9.9E-05 42.6 4.1 72 102-177 147-224 (452)
119 cd08162 MPP_PhoA_N Synechococc 69.2 7.6 0.00017 39.0 5.0 65 105-174 3-91 (313)
120 KOG3325|consensus 68.7 17 0.00037 33.0 6.4 100 104-240 2-107 (183)
121 PRK09558 ushA bifunctional UDP 67.8 5.3 0.00012 43.2 3.8 67 103-174 35-121 (551)
122 COG0737 UshA 5'-nucleotidase/2 66.1 7.2 0.00016 41.8 4.3 69 102-175 26-116 (517)
123 COG1311 HYS2 Archaeal DNA poly 64.9 18 0.00039 38.5 6.8 73 104-176 227-323 (481)
124 KOG3947|consensus 63.1 9 0.0002 38.0 3.9 63 103-175 62-127 (305)
125 cd07387 MPP_PolD2_C PolD2 (DNA 62.4 29 0.00063 34.0 7.4 46 131-176 44-109 (257)
126 KOG2679|consensus 62.4 7.7 0.00017 38.5 3.3 68 103-174 44-126 (336)
127 PRK09419 bifunctional 2',3'-cy 61.5 8.2 0.00018 45.7 4.0 67 103-174 42-139 (1163)
128 KOG2422|consensus 60.8 2.4 5.1E-05 45.8 -0.5 17 318-334 506-523 (665)
129 TIGR01530 nadN NAD pyrophospha 59.7 17 0.00037 39.4 5.8 41 129-174 49-94 (550)
130 KOG2422|consensus 59.6 3.4 7.4E-05 44.6 0.4 7 253-259 500-506 (665)
131 PRK09420 cpdB bifunctional 2', 59.2 12 0.00027 41.4 4.7 69 101-174 24-122 (649)
132 PTZ00235 DNA polymerase epsilo 58.1 34 0.00074 34.2 7.1 72 103-174 28-122 (291)
133 KOG2310|consensus 57.9 20 0.00043 38.8 5.6 51 103-153 14-76 (646)
134 TIGR01390 CycNucDiestase 2',3' 54.3 17 0.00038 40.1 4.8 66 104-174 4-99 (626)
135 KOG2812|consensus 50.8 7.2 0.00016 39.7 1.0 6 198-203 410-415 (426)
136 PF13945 NST1: Salt tolerance 48.9 7.7 0.00017 36.4 0.8 37 76-115 114-154 (190)
137 PRK11907 bifunctional 2',3'-cy 45.4 28 0.00062 39.7 4.8 67 103-174 116-213 (814)
138 KOG2775|consensus 43.1 28 0.0006 35.1 3.7 8 216-223 255-262 (397)
139 PF13258 DUF4049: Domain of un 41.7 46 0.001 32.4 4.8 88 130-224 85-186 (318)
140 PF02875 Mur_ligase_C: Mur lig 38.9 76 0.0017 25.2 5.2 69 103-171 12-82 (91)
141 KOG0526|consensus 33.3 24 0.00053 37.9 1.7 10 46-55 538-547 (615)
142 KOG2775|consensus 32.1 20 0.00043 36.0 0.8 17 78-94 81-97 (397)
143 PRK09418 bifunctional 2',3'-cy 32.0 64 0.0014 36.7 4.9 68 102-174 39-142 (780)
144 PF06874 FBPase_2: Firmicute f 29.4 44 0.00095 36.8 2.9 23 102-124 32-54 (640)
145 PF08496 Peptidase_S49_N: Pept 29.4 37 0.00079 30.8 2.0 29 76-104 109-141 (155)
146 TIGR00990 3a0801s09 mitochondr 25.8 59 0.0013 35.4 3.2 15 109-123 174-188 (615)
147 PF09692 Arb1: Argonaute siRNA 24.3 56 0.0012 34.1 2.5 25 52-78 37-64 (396)
148 COG3792 Uncharacterized protei 21.2 19 0.00041 31.3 -1.4 31 106-143 24-60 (122)
149 PF12641 Flavodoxin_3: Flavodo 20.8 3.6E+02 0.0078 24.4 6.8 79 129-226 38-116 (160)
150 TIGR00282 metallophosphoestera 20.2 76 0.0016 31.3 2.4 39 132-174 2-41 (266)
No 1
>KOG0375|consensus
Probab=100.00 E-value=1.1e-117 Score=863.01 Aligned_cols=348 Identities=66% Similarity=1.083 Sum_probs=339.6
Q ss_pred CCCCCcccCCCCCCCCCccchhhhhccCCCCCCChHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecCCccee
Q psy16023 29 CLTDTLFCSPGVPFPPSQKLIIADVFDTRTGKPRPDVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEAPVTVC 108 (416)
Q Consensus 29 ~lS~~dR~v~sVp~Pps~~l~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~Vv 108 (416)
.+++.+|.+++||.|++++++.+++|+.++|+|+.++|++||.+|||++++++++|+.+++++|++|+||+++++||+||
T Consensus 14 ~~st~dRvv~~Vp~p~s~~lT~~evfd~~~gkP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVC 93 (517)
T KOG0375|consen 14 VVSTTDRVVKAVPFPPSHRLTDEEVFDSRTGKPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVC 93 (517)
T ss_pred ccchhhhhhhcCCCCCcccCcHHHhhcCCCCCcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEe
Confidence 78999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhh
Q psy16023 109 GDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKI 188 (416)
Q Consensus 109 GDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~ 188 (416)
|||||||+||+++|+++|.|..++|+|||||||||.+|+||+.+|++||+.||..+++||||||+++++.+|+|.+||..
T Consensus 94 GDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~i 173 (517)
T KOG0375|consen 94 GDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKI 173 (517)
T ss_pred cccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhccCceEEEeCcEEEEeCCCCCCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCC
Q psy16023 189 KYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHK 266 (416)
Q Consensus 189 ~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~ 266 (416)
+|++++|+++++.|++||+||+.++++||||||+||++.+++||+.++||.|+| |++||| |||||.+++++ +.
T Consensus 174 KYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDL----LWsDPlEdfgn-ek 248 (517)
T KOG0375|consen 174 KYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDL----LWSDPLEDFGN-EK 248 (517)
T ss_pred hccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHhhhhccCCCccCcchhh----hccChhhhccc-cc
Confidence 999999999999999999999999999999999999999999999999999999 999999 99999999887 33
Q ss_pred CCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhh
Q psy16023 267 PSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEE 344 (416)
Q Consensus 267 ~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~ 344 (416)
++ +.|.+|+.|||+|+| +|.|+ |+||+ ||..||||||+|+.||+|++
T Consensus 249 ~~-----e~f~hNsvRGCSyfy--------------------sy~A~-----C~FLq~nnLLSIiRAHEAQDaGYRMYr- 297 (517)
T KOG0375|consen 249 TS-----EHFTHNSVRGCSYFY--------------------SYPAV-----CEFLQNNNLLSIIRAHEAQDAGYRMYR- 297 (517)
T ss_pred cc-----cccccCcccccccee--------------------chHHH-----HHHHHhCCchhhhhhhhhhhhhhhhhh-
Confidence 32 679999999999999 68887 99999 89999999999999999999
Q ss_pred hhhccCCCeEEEEeCCCCCcccccCCCCceEEEEEEeCCeeeEEEeecCCCCCCCCccceeeeecccccccC
Q psy16023 345 VMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEK 416 (416)
Q Consensus 345 ~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~~~~~~~~~~~f~~~~~p~~~p~~~~~f~~s~~~~~~~ 416 (416)
++|.+|||++|||||||||.|.| ||+||||+++||+|+|+||+|||||||||||||||||||||||||
T Consensus 298 ksqttGFPSLiTiFSAPNYLDvY----nNKAAvLKYEnNVMNIRQFncSPHPYWLPnFMDVFTWSLPFVGEK 365 (517)
T KOG0375|consen 298 KSQTTGFPSLITIFSAPNYLDVY----NNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEK 365 (517)
T ss_pred cccccCCchheeeecCCchhhhh----ccHHHHhhhhcccceeeccCCCCCCccccchhhheeeccccchHH
Confidence 78999999999999999999999 999999999999999999999999999999999999999999997
No 2
>KOG0372|consensus
Probab=100.00 E-value=3.6e-80 Score=576.48 Aligned_cols=278 Identities=35% Similarity=0.583 Sum_probs=260.4
Q ss_pred hHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCC
Q psy16023 63 PDVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDR 142 (416)
Q Consensus 63 ~~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDR 142 (416)
.+.+.+.+.+...+++.++..||..+.+||.+|+|++.++.|++|||||||||+||+.+|+.+|.++.++|+||||||||
T Consensus 3 ldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDR 82 (303)
T KOG0372|consen 3 LDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDR 82 (303)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhcc
Confidence 45566777777889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhh-hhHHHHHHHHhhccCceEEEeCcEEEEeCC
Q psy16023 143 GYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMDAFDCLPLAALMNQQFLCVHGG 221 (416)
Q Consensus 143 G~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~il~vHgG 221 (416)
|.+|+|++.+|++||++||+++++||||||++.+++.|||++||.++|+ ..+|+.+.+.|+.||++|+|++++||||||
T Consensus 83 G~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHGG 162 (303)
T KOG0372|consen 83 GYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHGG 162 (303)
T ss_pred ccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcCC
Confidence 9999999999999999999999999999999999999999999999996 589999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccc
Q psy16023 222 LSPEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMK 299 (416)
Q Consensus 222 isp~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~ 299 (416)
+||+++++|+|+.++|..|.| |.+||| |||||.+..+. .-|+||+||+||++
T Consensus 163 lSP~i~~lDqIr~lDR~~Eiph~g~m~Dl----lWSDPee~~g~--------------~~SPRGaGylFG~d-------- 216 (303)
T KOG0372|consen 163 LSPSIQTLDQIRVLDRKQEVPHDGAMCDL----LWSDPEEGPGW--------------GLSPRGAGYLFGED-------- 216 (303)
T ss_pred CCcchhhHHHHHHhhccccCCCCCcchhe----eccCcccCCCc--------------ccCCCCccccccHH--------
Confidence 999999999999999999998 999999 99999886543 25799999999842
Q ss_pred cCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEE
Q psy16023 300 RTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAV 377 (416)
Q Consensus 300 ~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~av 377 (416)
+|++||+ ++..|+||||.+++||+++++ .+|+|||||||||... +|.|||
T Consensus 217 -----------------vv~~F~~~N~~~~I~RaHQLv~eGyk~~F~-------~~v~TVWSAPNYCYrC----GN~AsI 268 (303)
T KOG0372|consen 217 -----------------VVESFLEANGLSLICRAHQLVMEGYKWHFD-------EKVVTVWSAPNYCYRC----GNVAAI 268 (303)
T ss_pred -----------------HHHHHHHhCChHHHHHHHHHHHhhHHHhcC-------CceEEEecCCchhhhc----CChHHh
Confidence 4699999 899999999999999999985 3899999999999876 999999
Q ss_pred EEEeCC-eeeEEEeecCC
Q psy16023 378 LKYENN-VMNIRQFNCSP 394 (416)
Q Consensus 378 l~~~~~-~~~~~~f~~~~ 394 (416)
|.++++ ...|+.|++.|
T Consensus 269 l~lde~~~~~F~vFeaa~ 286 (303)
T KOG0372|consen 269 LELDEDLDKDFRVFEAAP 286 (303)
T ss_pred eeeccccCcceEeeecch
Confidence 999877 67899999876
No 3
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.2e-77 Score=591.31 Aligned_cols=301 Identities=65% Similarity=1.049 Sum_probs=277.1
Q ss_pred CChHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCC
Q psy16023 61 PRPDVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYV 140 (416)
Q Consensus 61 p~~~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyV 140 (416)
|+.+.|++||.++++++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.++.++||||||||
T Consensus 1 ~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyV 80 (305)
T cd07416 1 PRIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYV 80 (305)
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCcc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEEEeCcEEEEeC
Q psy16023 141 DRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHG 220 (416)
Q Consensus 141 DRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHg 220 (416)
|||++|+||+.+|+++|+.+|+++++||||||.+.++..++|..||..+|+.++|..+.++|++||++|+++++++||||
T Consensus 81 DRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 81 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCccccccc
Q psy16023 221 GLSPEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAM 298 (416)
Q Consensus 221 Gisp~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~ 298 (416)
||+|.+.++++|+.|+|+.+++ +.++|+ |||||.+..+.. .+...|.+++.||+|++||+
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dl----lWsDP~~~~~~~------~~~~~~~~~~~Rg~g~~fG~-------- 222 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDL----LWSDPLEDFGNE------KTQEHFVHNTVRGCSYFYSY-------- 222 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceee----eecCcccccccc------cccccccccCCCCCceecCH--------
Confidence 9999999999999999998876 677888 999997653320 01134667789999999983
Q ss_pred ccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEE
Q psy16023 299 KRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAA 376 (416)
Q Consensus 299 ~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~a 376 (416)
++ +++||+ |+++||||||++++||+++++ .+..++++|||||||||||+.+ +|+||
T Consensus 223 ------------~~-----~~~Fl~~n~l~~iiR~He~~~~G~~~~~~-~~~~~~~~~iTvFSa~~Y~~~~----~N~~a 280 (305)
T cd07416 223 ------------RA-----VCEFLQKNNLLSIIRAHEAQDAGYRMYRK-SQTTGFPSLITIFSAPNYLDVY----NNKAA 280 (305)
T ss_pred ------------HH-----HHHHHHHcCCeEEEEeccccccceEEecC-CCcCCCCcEEEEeCCccccCCC----CceEE
Confidence 33 499999 899999999999999999773 2335667999999999999988 89999
Q ss_pred EEEEeCCeeeEEEeecCCCCCCCCc
Q psy16023 377 VLKYENNVMNIRQFNCSPHPYWLPN 401 (416)
Q Consensus 377 vl~~~~~~~~~~~f~~~~~p~~~p~ 401 (416)
||.++++.++|.+|+++||||||||
T Consensus 281 ~l~i~~~~~~~~~~~~~~~~~~~~~ 305 (305)
T cd07416 281 VLKYENNVMNIRQFNCSPHPYWLPN 305 (305)
T ss_pred EEEEcCCcceEEEecCCCCCCCCCC
Confidence 9999999899999999999999997
No 4
>KOG0373|consensus
Probab=100.00 E-value=1.2e-72 Score=518.92 Aligned_cols=282 Identities=32% Similarity=0.551 Sum_probs=259.5
Q ss_pred CChHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCC
Q psy16023 61 PRPDVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYV 140 (416)
Q Consensus 61 p~~~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyV 140 (416)
-+++.-++....-.-+++.++.+||+.++++|..|.|+..++.|++|||||||||+||+++|+.+|.-+++.|||+||||
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 34555667777788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhh-hhHHHHHHHHhhccCceEEEeCcEEEEe
Q psy16023 141 DRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMDAFDCLPLAALMNQQFLCVH 219 (416)
Q Consensus 141 DRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~il~vH 219 (416)
|||.+|+|++.+|+.||.+||.+|.+||||||++.+++.|||++||..+|+ .++|.-+..+|+.|+++|+|+++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 999999999999999999999999999999999999999999999999996 5899999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccc
Q psy16023 220 GGLSPEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISA 297 (416)
Q Consensus 220 gGisp~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~ 297 (416)
||+||++.++|+|+-|+|..|.| |.+||| +||||.+...+ .-++||+||+||..
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDl----mWSDPedve~W--------------~vSpRGAGwlFGsk------ 219 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDL----MWSDPEDVETW--------------AVSPRGAGWLFGSK------ 219 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccce----eccChhhhhhh--------------eeCCCCcceeechh------
Confidence 99999999999999999999999 999999 99999874322 35799999999842
Q ss_pred cccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceE
Q psy16023 298 MKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKA 375 (416)
Q Consensus 298 ~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~ 375 (416)
++.+|+. +|.+|+||||.+++||++.++. ..++|||||||||... +|.|
T Consensus 220 -------------------Vt~eF~~iN~L~LicRaHQLV~EG~KymF~e------K~lvTVWSAPNYCYRC----GNvA 270 (306)
T KOG0373|consen 220 -------------------VTTEFNHINNLNLICRAHQLVQEGFKYMFDE------KGLVTVWSAPNYCYRC----GNVA 270 (306)
T ss_pred -------------------hhHHHHhccchHHHHhHHHHHHhhHHhccCC------CCEEEEecCCchhhhc----cCee
Confidence 4599998 7999999999999999987742 1399999999999865 9999
Q ss_pred EEEEEeCC-eeeEEEeecCCC
Q psy16023 376 AVLKYENN-VMNIRQFNCSPH 395 (416)
Q Consensus 376 avl~~~~~-~~~~~~f~~~~~ 395 (416)
|||.++++ ..+++.|.++|.
T Consensus 271 si~~~d~~~~r~~k~F~avpd 291 (306)
T KOG0373|consen 271 SIMSFDDNLERETKIFSAVPD 291 (306)
T ss_pred eEEEecccCCccceeeeecCC
Confidence 99999877 789999999774
No 5
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=7.5e-71 Score=547.44 Aligned_cols=285 Identities=33% Similarity=0.551 Sum_probs=260.2
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecCC----cceecCCcccHHHHHHHHHhcCCCC-Cceeeeecc
Q psy16023 64 DVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEAP----VTVCGDIHGQFYDLMKLFEVGGPPA-STKYLFLGD 138 (416)
Q Consensus 64 ~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~~----i~VvGDIHG~~~dL~~ll~~~g~~~-~~~~vfLGD 138 (416)
+.+.+++.+++.|+++++.+||++|.++|++||++++++.| ++||||||||+.+|.++|+..+.++ .++||||||
T Consensus 17 ~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGD 96 (316)
T cd07417 17 KEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGD 96 (316)
T ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEee
Confidence 45678888888999999999999999999999999999866 9999999999999999999888765 467999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEEEeCcEEEE
Q psy16023 139 YVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCV 218 (416)
Q Consensus 139 yVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~v 218 (416)
|||||++|+||+.+|+++|+.+|+++++||||||.+.++..+||.+|+..+|+..+|+.+.++|++||++|+++++++||
T Consensus 97 yVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LPlaaii~~~~~~v 176 (316)
T cd07417 97 FVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLPLAHLINGKVLVV 176 (316)
T ss_pred EecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhchHhheeCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCC-CCCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccc
Q psy16023 219 HGGL-SPEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKI 295 (416)
Q Consensus 219 HgGi-sp~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l 295 (416)
|||| +|...++++++.+.|+.+++ +.++|+ |||||.+..+ | .++.||+|+.||+
T Consensus 177 HgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dl----lWsDP~~~~~-------------~-~~s~Rg~g~~fg~----- 233 (316)
T cd07417 177 HGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCEL----LWSDPQPQPG-------------R-SPSKRGVGCQFGP----- 233 (316)
T ss_pred ccccccCCCccHHHhhcccCCCCCCccccceee----eecCCCCCCC-------------C-CccCCCCceEeCH-----
Confidence 9999 56788999999999998776 667888 9999986422 2 3678999999983
Q ss_pred cccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCc
Q psy16023 296 SAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVV 373 (416)
Q Consensus 296 ~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N 373 (416)
++ +++||+ |+++||||||++++||+++++ ++|+|||||||||+.+ +|
T Consensus 234 ---------------~~-----~~~Fl~~n~l~~iiR~He~~~~G~~~~~~-------~~~~TvfSa~~Y~~~~----~N 282 (316)
T cd07417 234 ---------------DV-----TKRFLEENNLEYIIRSHEVKDEGYEVEHD-------GKCITVFSAPNYCDQM----GN 282 (316)
T ss_pred ---------------HH-----HHHHHHHcCCcEEEECCcccceeEEEecC-------CeEEEEeCCccccCCC----Cc
Confidence 34 499999 899999999999999998773 4899999999999988 99
Q ss_pred eEEEEEEeC--CeeeEEEeecCCCCCCCCcc
Q psy16023 374 KAAVLKYEN--NVMNIRQFNCSPHPYWLPNF 402 (416)
Q Consensus 374 ~~avl~~~~--~~~~~~~f~~~~~p~~~p~~ 402 (416)
+||+|.|++ ..++|.+|++++||+|+|+-
T Consensus 283 ~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 313 (316)
T cd07417 283 KGAFIRITGSDLKPKFTQFEAVPHPNVKPMA 313 (316)
T ss_pred ceEEEEEeCCCceeeeEeccCCCCCCCCccC
Confidence 999999986 36789999999999999985
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=6.4e-70 Score=540.40 Aligned_cols=276 Identities=27% Similarity=0.407 Sum_probs=244.7
Q ss_pred CChHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecC----CcceecCCcccHHHHHHHHHhcCCCC-Cceeee
Q psy16023 61 PRPDVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEA----PVTVCGDIHGQFYDLMKLFEVGGPPA-STKYLF 135 (416)
Q Consensus 61 p~~~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~----~i~VvGDIHG~~~dL~~ll~~~g~~~-~~~~vf 135 (416)
.+.+.+.+++.+.++|+++++.+||++|+++|++||++++++. |++||||||||+++|.++|+..|.|+ .++|||
T Consensus 5 ~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lF 84 (321)
T cd07420 5 DHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVF 84 (321)
T ss_pred HHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEE
Confidence 4466788999999999999999999999999999999999975 89999999999999999999888875 578999
Q ss_pred eccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhh---hhHHHHHHHHhhccCceEEEe
Q psy16023 136 LGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYS---ERVYDACMDAFDCLPLAALMN 212 (416)
Q Consensus 136 LGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~---~~~~~~~~~~f~~LPlaa~i~ 212 (416)
||||||||++|+||+.+|++||+.||+++++||||||++.++..|||.+||..+|+ ..+|+.+.++|++||+||+++
T Consensus 85 LGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~ 164 (321)
T cd07420 85 NGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIID 164 (321)
T ss_pred eccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEc
Confidence 99999999999999999999999999999999999999999999999999999997 789999999999999999999
Q ss_pred CcEEEEeCCCCCCCCCHHHHHhhcCCCC-----CC------------------------CcccccccCceecCCCCCcCC
Q psy16023 213 QQFLCVHGGLSPEIHNLDDIRKTDSKSH-----PL------------------------SDQCVIYCGQTHSSNINLTNN 263 (416)
Q Consensus 213 ~~il~vHgGisp~~~~l~~i~~i~r~~~-----~~------------------------~~~~dl~~~~LWsDP~~~~~~ 263 (416)
+++|||||||+| ..++++|+.|.|+.. +| +.++|+ |||||.+..+
T Consensus 165 ~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl----LWSDP~~~~~- 238 (321)
T cd07420 165 NKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDI----LWSDPKAQKG- 238 (321)
T ss_pred CCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhhee----eecCCccCCC-
Confidence 999999999996 578999999988521 11 123455 9999985422
Q ss_pred CCCCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchh
Q psy16023 264 RHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDA 341 (416)
Q Consensus 264 ~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~ 341 (416)
+..++.||+|++||+ +| +++||+ +|++||||||++++||++
T Consensus 239 ------------~~~~~~RG~g~~FG~--------------------~~-----~~~Fl~~n~l~~IIR~He~v~~G~~~ 281 (321)
T cd07420 239 ------------CKPNTFRGGGCYFGP--------------------DV-----TSKVLQKHGLSLLIRSHECKPEGYEF 281 (321)
T ss_pred ------------CCccCCCCCccccCH--------------------HH-----HHHHHHHCCCcEEEEcChhhhcceEE
Confidence 345778999999984 34 499999 899999999999999998
Q ss_pred hhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEEEEEeCC-eeeEEEe
Q psy16023 342 LEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLKYENN-VMNIRQF 390 (416)
Q Consensus 342 ~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~~~~~-~~~~~~f 390 (416)
+++ ++|+|||||||||+.+ +|+||||.++++ ..+|.||
T Consensus 282 ~~~-------~~~iTvFSa~nY~~~~----~N~gavl~i~~~~~~~f~~~ 320 (321)
T cd07420 282 CHN-------NKVITIFSASNYYEEG----SNRGAYIKLGPDLTPHFVQY 320 (321)
T ss_pred ecC-------CeEEEEecCCccCCCC----CccEEEEEECCCCceeEEEe
Confidence 773 4899999999999987 899999999875 4567776
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=5.2e-69 Score=527.85 Aligned_cols=278 Identities=36% Similarity=0.614 Sum_probs=255.8
Q ss_pred hHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCC
Q psy16023 63 PDVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDR 142 (416)
Q Consensus 63 ~~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDR 142 (416)
.+.+.+++.+++.++++++.+||++|.++|++||++++++.+++||||||||+.+|.++|+..+.++.++||||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 45678899999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred CCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhh-hHHHHHHHHhhccCceEEEeCcEEEEeCC
Q psy16023 143 GYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGG 221 (416)
Q Consensus 143 G~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPlaa~i~~~il~vHgG 221 (416)
|++|+||+.+|+++++.+|.++++||||||.+.++..|||.+||..+|+. .+|..+.++|++||++|+++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999974 89999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccc
Q psy16023 222 LSPEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMK 299 (416)
Q Consensus 222 isp~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~ 299 (416)
|+|.+.++++|+.|.|+.+.+ +.++|+ |||||.+..+ | .++.||+|++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dl----lWsDP~~~~~-------------~-~~~~Rg~g~~fg~--------- 214 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDL----LWSDPDDIEG-------------W-GISPRGAGYLFGQ--------- 214 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccce----EecCCCccCC-------------C-CcCCCCCccccCH---------
Confidence 999999999999999998877 667888 9999986421 3 3568999999984
Q ss_pred cCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEE
Q psy16023 300 RTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAV 377 (416)
Q Consensus 300 ~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~av 377 (416)
+| +++||+ |+++||||||++++||++.++ ++|+|||||||||+.+ +|+|||
T Consensus 215 -----------~~-----~~~Fl~~n~l~~iiR~He~~~~G~~~~~~-------~~~~TvfSa~~y~~~~----~n~~a~ 267 (285)
T cd07415 215 -----------DV-----VEEFNHNNGLTLICRAHQLVMEGYQWMFD-------DKLVTVWSAPNYCYRC----GNVASI 267 (285)
T ss_pred -----------HH-----HHHHHHHCCCeEEEEcCccccceEEEecC-------CcEEEEecCCcccCCC----CceEEE
Confidence 34 499999 899999999999999998773 4899999999999988 899999
Q ss_pred EEEeCC-eeeEEEeecCC
Q psy16023 378 LKYENN-VMNIRQFNCSP 394 (416)
Q Consensus 378 l~~~~~-~~~~~~f~~~~ 394 (416)
|.++++ .+++.+|++++
T Consensus 268 l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 268 MELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EEECCCCcEeEEEeccCC
Confidence 999865 67899998654
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=7.7e-69 Score=529.93 Aligned_cols=280 Identities=34% Similarity=0.531 Sum_probs=256.3
Q ss_pred hHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCC
Q psy16023 63 PDVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDR 142 (416)
Q Consensus 63 ~~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDR 142 (416)
.+.+.+++.+++.++++++.+||++|.+||++||++++++.+++||||||||+.+|.++|+..+.++.++||||||||||
T Consensus 3 ~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDR 82 (303)
T PTZ00239 3 IDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDR 82 (303)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCC
Confidence 46678888989999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred CCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhh-hHHHHHHHHhhccCceEEEeCcEEEEeCC
Q psy16023 143 GYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGG 221 (416)
Q Consensus 143 G~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPlaa~i~~~il~vHgG 221 (416)
|++|+||+.+|+++|+.+|.++++||||||.+.++..|||.+||..+|+. .+|..+.++|++||++|+++++++|||||
T Consensus 83 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHgG 162 (303)
T PTZ00239 83 GYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHGG 162 (303)
T ss_pred CCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcCc
Confidence 99999999999999999999999999999999999999999999999974 79999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccc
Q psy16023 222 LSPEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMK 299 (416)
Q Consensus 222 isp~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~ 299 (416)
|+|.+.++++|+.|.|+.+.| +.++|+ |||||.+.. .| .++.||+|++||+
T Consensus 163 i~p~~~~l~~i~~i~r~~~~~~~~~~~dl----lWsDP~~~~-------------~~-~~~~Rg~g~~fg~--------- 215 (303)
T PTZ00239 163 LSPDMRTIDQIRTIDRKIEIPHEGPFCDL----MWSDPEEVE-------------YW-AVNSRGAGYLFGA--------- 215 (303)
T ss_pred cCcccccHhhhccccCCCCCCCCCCceee----EecCccccC-------------CC-ccCCCCCccccCH---------
Confidence 999999999999999998877 677888 999997532 13 3568999999984
Q ss_pred cCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEE
Q psy16023 300 RTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAV 377 (416)
Q Consensus 300 ~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~av 377 (416)
+| +++||+ |+++||||||++++||+++++. ++|||||||||||+.+ +|+|||
T Consensus 216 -----------~~-----~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~------~~~iTvfSa~~Y~~~~----~N~~ai 269 (303)
T PTZ00239 216 -----------KV-----TKEFCRLNDLTLICRAHQLVMEGYKYWFPD------QNLVTVWSAPNYCYRC----GNIASI 269 (303)
T ss_pred -----------HH-----HHHHHHHCCCcEEEEcChhhccceEEEeCC------CeEEEEECCCcccCCC----CceEEE
Confidence 34 499999 8999999999999999986521 2699999999999987 899999
Q ss_pred EEEeCC-eeeEEEeecCCC
Q psy16023 378 LKYENN-VMNIRQFNCSPH 395 (416)
Q Consensus 378 l~~~~~-~~~~~~f~~~~~ 395 (416)
|.++++ .++|.+|+++++
T Consensus 270 l~i~~~~~~~~~~~~~~~~ 288 (303)
T PTZ00239 270 LCLDENLQQTWKTFKEVPE 288 (303)
T ss_pred EEECCCCcEeeEEeeCCCc
Confidence 999876 678999998765
No 9
>KOG0374|consensus
Probab=100.00 E-value=3.3e-69 Score=536.49 Aligned_cols=264 Identities=32% Similarity=0.582 Sum_probs=246.0
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcC-CCCCceeeeeccCCCCCCChHHHHHHHH
Q psy16023 76 IDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGG-PPASTKYLFLGDYVDRGYFSIECVLYLW 154 (416)
Q Consensus 76 ~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g-~~~~~~~vfLGDyVDRG~~s~evl~lL~ 154 (416)
++++++.+||..+.++|..+|+++++++||.|||||||||.||+++|...| .|+..+|||||||||||++|+|++.+|+
T Consensus 32 l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~ 111 (331)
T KOG0374|consen 32 LSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLF 111 (331)
T ss_pred ccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhh
Confidence 788999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhh-hhHHHHHHHHhhccCceEEEeCcEEEEeCCCCCCCCCHHHHH
Q psy16023 155 ALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHNLDDIR 233 (416)
Q Consensus 155 ~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~il~vHgGisp~~~~l~~i~ 233 (416)
++|++||+++++||||||++.++..|||++||.++|+ ..+|..|++.|++||++|+|+++++|+|||++|.+.++++|+
T Consensus 112 a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~ 191 (331)
T KOG0374|consen 112 ALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQIR 191 (331)
T ss_pred hhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHHh
Confidence 9999999999999999999999999999999999999 699999999999999999999999999999999999999999
Q ss_pred hhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhcc
Q psy16023 234 KTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYE 311 (416)
Q Consensus 234 ~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~ 311 (416)
.|.|+.+.+ |..+|| |||||...... |. .+.||+++.||+ +
T Consensus 192 ~i~rp~~~~~~gll~DL----lWsdp~~~~~g------------~~-~n~Rg~s~~fg~--------------------~ 234 (331)
T KOG0374|consen 192 AIPRPTDSPDKGLLCDL----LWSDPDDDVPG------------WE-ENDRGVSFTFGP--------------------A 234 (331)
T ss_pred hccCCcCCCccceeeee----eecCCCCCCCC------------cc-cCCCceeeEecH--------------------H
Confidence 999998877 788899 99999876322 33 457999999983 2
Q ss_pred cchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEEEEEeCC-eeeEE
Q psy16023 312 AAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLKYENN-VMNIR 388 (416)
Q Consensus 312 a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~~~~~-~~~~~ 388 (416)
+|.+||+ ++++||||||++.+||++++++ +++||||||||||.+ +|.||||.++.+ .++|+
T Consensus 235 -----~v~~f~~~~~ldlivRaHqvv~dGyeffa~r-------~lvTIFSAP~Ycg~~----~n~gavm~Vd~~l~~sf~ 298 (331)
T KOG0374|consen 235 -----VVEDFCKKLDLDLIVRAHQVVEDGYEFFAGR-------KLVTIFSAPNYCGEF----DNAGAVMRVDKNLKCSFV 298 (331)
T ss_pred -----HHHHHHHHhCcceEEEcCccccccceEecCc-------eEEEEecCchhcccc----CCceEEEEECCCCeEEEE
Confidence 3599999 8999999999999999999853 799999999999999 999999999977 66788
Q ss_pred Eeec
Q psy16023 389 QFNC 392 (416)
Q Consensus 389 ~f~~ 392 (416)
.+..
T Consensus 299 ~l~p 302 (331)
T KOG0374|consen 299 ILRP 302 (331)
T ss_pred Eecc
Confidence 7766
No 10
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.7e-68 Score=528.22 Aligned_cols=285 Identities=29% Similarity=0.567 Sum_probs=255.5
Q ss_pred CCCChHHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCC
Q psy16023 59 GKPRPDVLKQHFILEG--------RIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPAS 130 (416)
Q Consensus 59 ~~p~~~~l~~~~~~~~--------~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~ 130 (416)
+.-+++.+.+.+.+.. .++++++.+||++|.++|++||++++++.+++||||||||+.+|.++|+..+.++.
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~ 86 (320)
T PTZ00480 7 GEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPE 86 (320)
T ss_pred cCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCc
Confidence 3444555666655433 58899999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEE
Q psy16023 131 TKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAAL 210 (416)
Q Consensus 131 ~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~ 210 (416)
++|||||||||||++|+||+.+|+++++.+|+++++||||||.+.++..|||..||..+|+..+|..++++|++||+||+
T Consensus 87 ~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAi 166 (320)
T PTZ00480 87 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAAL 166 (320)
T ss_pred ceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCcEEEEeCCCCCCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEe
Q psy16023 211 MNQQFLCVHGGLSPEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYC 288 (416)
Q Consensus 211 i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~f 288 (416)
+++++|||||||+|.+.++++|+.+.|+.+.+ +.++|+ |||||.+.... | .++.||+|++|
T Consensus 167 I~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dl----lWSDP~~~~~~------------~-~~s~RG~g~~F 229 (320)
T PTZ00480 167 IDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDL----LWSDPDKDVQG------------W-ADNERGVSYVF 229 (320)
T ss_pred ecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhhe----eecCcccccCC------------C-ccCCCCCcccc
Confidence 99999999999999999999999999998876 667888 99999864322 3 35689999999
Q ss_pred CCCcccccccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCccc
Q psy16023 289 GQTHSKISAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTK 366 (416)
Q Consensus 289 G~~~~~l~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~ 366 (416)
|+ +| +++||+ |+++||||||++++||+++++ ++|||||||||||+.
T Consensus 230 G~--------------------~~-----~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~-------~~~iTvFSa~~Y~~~ 277 (320)
T PTZ00480 230 SQ--------------------EI-----VQVFLKKHELDLICRAHQVVEDGYEFFSK-------RQLVTLFSAPNYCGE 277 (320)
T ss_pred CH--------------------HH-----HHHHHHhCCCcEEEEcCccccCceEEeCC-------CcEEEEeCCcccCCC
Confidence 84 34 499999 899999999999999998763 489999999999998
Q ss_pred ccCCCCceEEEEEEeCC-eeeEEEeecCCCC
Q psy16023 367 HKTRGVVKAAVLKYENN-VMNIRQFNCSPHP 396 (416)
Q Consensus 367 ~~~~~~N~~avl~~~~~-~~~~~~f~~~~~p 396 (416)
+ +|+||+|.++++ .+.+.+|...+..
T Consensus 278 ~----~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 278 F----DNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred C----CccEEEEEECCCCcEeEEEecCCccc
Confidence 7 899999999876 5578888755443
No 11
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=4e-67 Score=516.30 Aligned_cols=264 Identities=30% Similarity=0.613 Sum_probs=243.9
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHH
Q psy16023 75 RIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLW 154 (416)
Q Consensus 75 ~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~ 154 (416)
.++++++.+||++|.++|++||++++++.+++||||||||+.+|.++|+..+.++.++|||||||||||++|+|++.+|+
T Consensus 22 ~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~ 101 (293)
T cd07414 22 QLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLL 101 (293)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEEEeCcEEEEeCCCCCCCCCHHHHHh
Q psy16023 155 ALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHNLDDIRK 234 (416)
Q Consensus 155 ~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGisp~~~~l~~i~~ 234 (416)
++|+.+|.++++||||||.+.++..+||.+||..+|+..+|..+.++|++||++|+++++++|||||++|.+.++++|+.
T Consensus 102 ~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~ 181 (293)
T cd07414 102 AYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRR 181 (293)
T ss_pred HhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCcccCcHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhccc
Q psy16023 235 TDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEA 312 (416)
Q Consensus 235 i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a 312 (416)
+.|+.+.+ +.++|+ |||||.+.... | .++.||+|+.||+ ++
T Consensus 182 i~r~~~~~~~~~~~dl----lWsDP~~~~~~------------~-~~~~Rg~g~~fg~--------------------~~ 224 (293)
T cd07414 182 IMRPTDVPDQGLLCDL----LWSDPDKDVQG------------W-GENDRGVSFTFGK--------------------DV 224 (293)
T ss_pred ccCCCCCCchhhHhhh----hccCcccccCC------------C-ccCCCCcceecCH--------------------HH
Confidence 99998776 667888 99999865322 3 3568999999984 34
Q ss_pred chhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEEEEEeCC-eeeEEE
Q psy16023 313 APIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLKYENN-VMNIRQ 389 (416)
Q Consensus 313 ~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~~~~~-~~~~~~ 389 (416)
+++||+ |+++||||||++++||+++++ ++|||||||||||+.+ +|+||||.++++ .++|.+
T Consensus 225 -----~~~Fl~~n~l~~iiR~He~~~~G~~~~~~-------~~~iTvfSa~~Y~~~~----~N~~a~l~i~~~~~~~~~~ 288 (293)
T cd07414 225 -----VAKFLNKHDLDLICRAHQVVEDGYEFFAK-------RQLVTLFSAPNYCGEF----DNAGAMMSVDETLMCSFQI 288 (293)
T ss_pred -----HHHHHHHcCCeEEEECCccccCeEEEeCC-------CcEEEEecCCcccCCC----CceEEEEEECCCCcEEEEE
Confidence 499999 899999999999999998763 4899999999999987 899999999876 557777
Q ss_pred ee
Q psy16023 390 FN 391 (416)
Q Consensus 390 f~ 391 (416)
|+
T Consensus 289 ~~ 290 (293)
T cd07414 289 LK 290 (293)
T ss_pred ec
Confidence 75
No 12
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=8.4e-67 Score=513.76 Aligned_cols=265 Identities=27% Similarity=0.531 Sum_probs=243.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHH
Q psy16023 75 RIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLW 154 (416)
Q Consensus 75 ~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~ 154 (416)
.++++++.+||++|.++|++||++++++.|++||||||||+.+|.++|+..+.++.++|+|||||||||++|+||+.+|+
T Consensus 24 ~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~ 103 (294)
T PTZ00244 24 LIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQF 103 (294)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEEEeCcEEEEeCCCCCCCCCHHHHHh
Q psy16023 155 ALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHNLDDIRK 234 (416)
Q Consensus 155 ~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGisp~~~~l~~i~~ 234 (416)
++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++|+++++++|||||++|.+.++++++.
T Consensus 104 ~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~ 183 (294)
T PTZ00244 104 CYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISEKIICMHGGLSPDLTSLASVNE 183 (294)
T ss_pred HHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecCeeEEEcCCCCchhhHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhccc
Q psy16023 235 TDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEA 312 (416)
Q Consensus 235 i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a 312 (416)
+.|+.+.+ +..+|+ |||||.+.... | .++.||+|++||+ +|
T Consensus 184 i~rp~~~~~~~~~~dl----lWsDP~~~~~~------------~-~~~~Rg~g~~fg~--------------------~~ 226 (294)
T PTZ00244 184 IERPCDVPDRGILCDL----LWADPEDEVRG------------F-LESDRGVSYLFGE--------------------DI 226 (294)
T ss_pred hccccCCCccchhhee----eecCcccccCC------------C-CcCCCCCccccCH--------------------HH
Confidence 99998876 567788 99999864322 3 3678999999984 34
Q ss_pred chhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEEEEEeCC-eeeEEE
Q psy16023 313 APIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLKYENN-VMNIRQ 389 (416)
Q Consensus 313 ~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~~~~~-~~~~~~ 389 (416)
+++||+ |+++||||||++++||+++++ ++|+||||||||||.+ +|+||||.++++ .++|.+
T Consensus 227 -----~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~-------~~~iTvfSa~~Y~~~~----~N~~a~l~i~~~~~~~f~~ 290 (294)
T PTZ00244 227 -----VNDFLDMVDMDLIVRAHQVMERGYGFFAS-------RQLVTVFSAPNYCGEF----DNDAAVMNIDDKLQCSFLI 290 (294)
T ss_pred -----HHHHHHHcCCcEEEEcCccccCceEEcCC-------CeEEEEeCCccccCCC----CceEEEEEECCCCcEeEEE
Confidence 499999 899999999999999998763 4899999999999987 899999999876 557776
Q ss_pred eec
Q psy16023 390 FNC 392 (416)
Q Consensus 390 f~~ 392 (416)
|.+
T Consensus 291 ~~~ 293 (294)
T PTZ00244 291 IPA 293 (294)
T ss_pred eec
Confidence 654
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=7.9e-66 Score=502.70 Aligned_cols=264 Identities=41% Similarity=0.700 Sum_probs=241.9
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHH
Q psy16023 76 IDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWA 155 (416)
Q Consensus 76 ~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~ 155 (416)
++++++.+||++|.++|++||++++++++++||||||||+.+|.++|+..+.++.++|||||||||||++|+||+.+|++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999998989999999999999999999999999999
Q ss_pred hhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEEEeCcEEEEeCCCCCCCCCHHHHHhh
Q psy16023 156 LKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHNLDDIRKT 235 (416)
Q Consensus 156 lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGisp~~~~l~~i~~i 235 (416)
+++.+|.++++||||||.+.++..+||.+||..+|+.++|+.+.++|++||++|+++++++|||||++|.+.++++|+.|
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhcccc
Q psy16023 236 DSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEAA 313 (416)
Q Consensus 236 ~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a~ 313 (416)
.|+.+.+ +.++|+ |||||..... .|. ++.||+|+.||+ ++
T Consensus 161 ~r~~~~~~~~~~~dl----lWsDP~~~~~------------~~~-~~~Rg~g~~fg~--------------------~~- 202 (271)
T smart00156 161 KRPQEPPDEGLLIDL----LWSDPDQPVD------------GFQ-PSIRGASYYFGP--------------------DA- 202 (271)
T ss_pred cCCCCCCchhhhhhe----eecCCCcccC------------CCc-cCCCCCccccCH--------------------HH-
Confidence 9998776 667788 9999975332 244 446999999984 34
Q ss_pred hhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEEEEEeCC-eeeEEEe
Q psy16023 314 PIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLKYENN-VMNIRQF 390 (416)
Q Consensus 314 ~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~~~~~-~~~~~~f 390 (416)
+++||+ |+++||||||++++||+++++ ++|+|||||||||+.+ +|+||+|.++++ .+++.+|
T Consensus 203 ----~~~Fl~~n~l~~iiR~He~~~~G~~~~~~-------~~~~TvfSa~~y~~~~----~n~~a~~~i~~~~~~~~~~~ 267 (271)
T smart00156 203 ----VDEFLKKNNLKLIIRAHQVVDDGYEFFHD-------RKLVTIFSAPNYCGRF----GNKAAVLKVDKDLKLSFEQF 267 (271)
T ss_pred ----HHHHHHHCCCeEEEecCcccCCcEEEecC-------CcEEEEECCcccccCC----CceEEEEEECCCCcEEEEEe
Confidence 499999 899999999999999999774 4899999999999987 899999999876 5688888
Q ss_pred ec
Q psy16023 391 NC 392 (416)
Q Consensus 391 ~~ 392 (416)
+.
T Consensus 268 ~~ 269 (271)
T smart00156 268 KP 269 (271)
T ss_pred cC
Confidence 63
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=6.2e-65 Score=512.23 Aligned_cols=277 Identities=29% Similarity=0.427 Sum_probs=242.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCcceec----CCcceecCCcccHHHHHHHHHhcCCCCC-ceeeeeccCCCCCCChHH
Q psy16023 74 GRIDETAALKIINEGATLLRSEKTMIDIE----APVTVCGDIHGQFYDLMKLFEVGGPPAS-TKYLFLGDYVDRGYFSIE 148 (416)
Q Consensus 74 ~~~~~~~~~~l~~~a~~il~~ep~ll~~~----~~i~VvGDIHG~~~dL~~ll~~~g~~~~-~~~vfLGDyVDRG~~s~e 148 (416)
..++.+++.+||++|.+||++||++++++ .+++||||||||+.+|.++|+..+.++. +.|||||||||||++|+|
T Consensus 33 ~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlE 112 (377)
T cd07418 33 SVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLE 112 (377)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChHH
Confidence 34789999999999999999999999998 7999999999999999999998887765 569999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhh---hHHHHHHHHhhccCceEEEeCcEEEEeCCC---
Q psy16023 149 CVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSE---RVYDACMDAFDCLPLAALMNQQFLCVHGGL--- 222 (416)
Q Consensus 149 vl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LPlaa~i~~~il~vHgGi--- 222 (416)
|+.+|+++++.+|+++++||||||.+.++..+||.+||..+|+. .+|+.+.++|++||++|++++++|||||||
T Consensus 113 vl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~ 192 (377)
T cd07418 113 TFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRS 192 (377)
T ss_pred HHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCc
Confidence 99999999999999999999999999999999999999999964 699999999999999999999999999999
Q ss_pred ------------------------CCCCCCHHHHHhhcCCC-CCC--Cc---ccccccCceecCCCCCcCCCCCCCcccc
Q psy16023 223 ------------------------SPEIHNLDDIRKTDSKS-HPL--SD---QCVIYCGQTHSSNINLTNNRHKPSVLFT 272 (416)
Q Consensus 223 ------------------------sp~~~~l~~i~~i~r~~-~~~--~~---~~dl~~~~LWsDP~~~~~~~~~~~~~~~ 272 (416)
+|.+.++++|+.++|+. +++ +. ++|| |||||.+..
T Consensus 193 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dl----LWSDP~~~~----------- 257 (377)
T cd07418 193 PSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDV----LWSDPSLTP----------- 257 (377)
T ss_pred ccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceee----EeeCCccCC-----------
Confidence 45577999999999974 555 32 4677 999998642
Q ss_pred CCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCc------------ccCC
Q psy16023 273 TDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDEL------------MSDG 338 (416)
Q Consensus 273 ~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~------------~~~G 338 (416)
.+..++.||+|++||+ ++ +.+||+ +|++||||||+ +++|
T Consensus 258 --g~~~~~~RG~g~~FG~--------------------~~-----~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~G 310 (377)
T cd07418 258 --GLSPNKQRGIGLLWGP--------------------DC-----TEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKG 310 (377)
T ss_pred --CCCccCCCCCccccCH--------------------HH-----HHHHHHHcCCcEEEECCCCcccccccccchhhhCc
Confidence 2456778999999984 34 499999 89999999996 6799
Q ss_pred chhhhhhhhccCCCeEEEEeCCCCCc------ccccCCCCceEEEEEEeCC---eeeEEEeecC-CCCCCCC
Q psy16023 339 DDALEEVMQHAVIFSKIIISSPLSEL------TKHKTRGVVKAAVLKYENN---VMNIRQFNCS-PHPYWLP 400 (416)
Q Consensus 339 y~~~~~~~~~~~~~~~iTvfSapnY~------~~~~~~~~N~~avl~~~~~---~~~~~~f~~~-~~p~~~p 400 (416)
|+++++. ..++||||||||||| +.+ +|+||+|.++.+ ..+|.||+++ |||-.-|
T Consensus 311 y~~~~~~----~~~~liTvFSa~nY~~~~~~~~~~----~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (377)
T cd07418 311 YTVDHDV----ESGKLITLFSAPDYPQFQATEERY----NNKGAYIILQPPDFSDPQFHTFEAVKPRPKANP 374 (377)
T ss_pred eEEeccC----CCCcEEEEecCCcccccccccccc----CcceEEEEEecCCCCCccceEeeccCCCCCCCc
Confidence 9987631 135899999999999 455 899999999754 4799999998 9987655
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.8e-62 Score=487.50 Aligned_cols=267 Identities=28% Similarity=0.461 Sum_probs=233.9
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCC--------ceeeeeccCCCCCCCh
Q psy16023 75 RIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPAS--------TKYLFLGDYVDRGYFS 146 (416)
Q Consensus 75 ~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~--------~~~vfLGDyVDRG~~s 146 (416)
.++++++.+||++|.+||++||++++++.+++||||||||+.+|.++|+..+.+.. .+|||||||||||++|
T Consensus 20 ~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s 99 (311)
T cd07419 20 FFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNS 99 (311)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCCh
Confidence 37889999999999999999999999999999999999999999999998776643 5799999999999999
Q ss_pred HHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhh------hHHHHHHHHhhccCceEEEeCcEEEEeC
Q psy16023 147 IECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSE------RVYDACMDAFDCLPLAALMNQQFLCVHG 220 (416)
Q Consensus 147 ~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~------~~~~~~~~~f~~LPlaa~i~~~il~vHg 220 (416)
+||+.+|+++++.+|.++++||||||.+.++..+||..||..+|+. .+|..+.++|++||++++++++++||||
T Consensus 100 ~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vHg 179 (311)
T cd07419 100 LETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHG 179 (311)
T ss_pred HHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEcc
Confidence 9999999999999999999999999999999999999999998864 6899999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcCCCC-CC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCC--CCCcce--EEeCCCcc
Q psy16023 221 GLSPEIHNLDDIRKTDSKSH-PL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHP--LSDQCV--IYCGQTHS 293 (416)
Q Consensus 221 Gisp~~~~l~~i~~i~r~~~-~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~--~~rG~~--~~fG~~~~ 293 (416)
|++|.+.++++|+.+.|+.. .+ +.++|+ |||||.+.... ..+..+ +.||.| +.||+
T Consensus 180 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~~dl----lWsDP~~~~~~----------~~~~~~~~~~rg~g~~~~fg~--- 242 (311)
T cd07419 180 GIGRSINHVSEIEDLKRPLTMEFGEQVVMDL----LWSDPTENDSV----------LGLRPNAIDPRGPGLIVKFGP--- 242 (311)
T ss_pred CCCCCCCcHHHHhhcCCCCCCCCCCcceeee----eccCccccccc----------cccccCCCCCCCCCcceeECH---
Confidence 99999999999999999863 22 556788 99999864211 112211 248877 79973
Q ss_pred cccccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCC
Q psy16023 294 KISAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRG 371 (416)
Q Consensus 294 ~l~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~ 371 (416)
+| +++||+ |+++||||||++++||+++++ ++|+|||||||||+.+
T Consensus 243 -----------------~~-----~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~-------~~~iTvfSa~~y~~~~---- 289 (311)
T cd07419 243 -----------------DR-----VHRFLEENDLQMIIRAHECVMDGFERFAQ-------GKLITLFSATNYCGTA---- 289 (311)
T ss_pred -----------------HH-----HHHHHHHCCCeEEEEechhhhCCeEEeCC-------CeEEEEecCCcccCCC----
Confidence 44 499999 899999999999999998763 4899999999999988
Q ss_pred CceEEEEEEeCC-eeeEEEee
Q psy16023 372 VVKAAVLKYENN-VMNIRQFN 391 (416)
Q Consensus 372 ~N~~avl~~~~~-~~~~~~f~ 391 (416)
+|+||||.++++ .+++.++.
T Consensus 290 ~n~~ai~~i~~~~~~~~~~~~ 310 (311)
T cd07419 290 GNAGAILVLGRDLTIIPKLIH 310 (311)
T ss_pred CceEEEEEECCCCcEeEEEeC
Confidence 899999999865 66777664
No 16
>KOG0371|consensus
Probab=100.00 E-value=4.6e-64 Score=471.27 Aligned_cols=275 Identities=33% Similarity=0.531 Sum_probs=253.4
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChH
Q psy16023 68 QHFILEGRIDETAALKIINEGATLLRSEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSI 147 (416)
Q Consensus 68 ~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~ 147 (416)
+++..=+.+++.++..+|..|+++|.+|.++..+..|++|||||||||++|+++|+++|..++..|+|+|||||||++|.
T Consensus 25 e~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~Sv 104 (319)
T KOG0371|consen 25 EQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYSV 104 (319)
T ss_pred HHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecccccchH
Confidence 44555567888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhh-hhhHHHHHHHHhhccCceEEEeCcEEEEeCCCCCCC
Q psy16023 148 ECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEI 226 (416)
Q Consensus 148 evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGisp~~ 226 (416)
|++.+|.++|++||++|.+||||||.+.++++|||++||.++| ...+|..|.+.|+++|+.|+|+++++|+|||++|++
T Consensus 105 etVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi 184 (319)
T KOG0371|consen 105 ETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSI 184 (319)
T ss_pred HHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccCCcCccc
Confidence 9999999999999999999999999999999999999999999 568999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcc
Q psy16023 227 HNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNI 304 (416)
Q Consensus 227 ~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~ 304 (416)
.+++.++.++|..+.| |++||| |||||++..++ .-++||+|+.||++
T Consensus 185 ~tld~~r~~dr~~evphegpmcDl----Lwsdpddr~gw--------------g~sprgag~tfg~d------------- 233 (319)
T KOG0371|consen 185 DTLDLIRLLDRIQEVPHEGPMCDL----LWSDPDDRCGW--------------GISPRGAGYTFGQD------------- 233 (319)
T ss_pred chHHHHHHHHHhhcccCCCChhhe----eccCcccCCCC--------------CCCCCCCCcccchh-------------
Confidence 9999999999988888 999999 99999987655 24689999999964
Q ss_pred hhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEEEEEeC
Q psy16023 305 LVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLKYEN 382 (416)
Q Consensus 305 ~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~~~~ 382 (416)
+.++|.. |+.+|-|+||.+++||.|++++ .++|||||||||... +|.||+|.+++
T Consensus 234 ------------i~~~fn~~n~lslisRahqlvm~g~nW~~~~-------~~vtiFSapnycYrc----gn~a~i~e~d~ 290 (319)
T KOG0371|consen 234 ------------ISEQFNHKNGLSLISRAHQLVMEGYNWYHLW-------NVVTIFSAPNYCYRC----GNQAAIMERDD 290 (319)
T ss_pred ------------hHHHhhccCCchHhHHHHHHHhcccceeeec-------ceeEEccCCchhhcc----ccHHHHhhhhh
Confidence 2277877 8999999999999999999864 477999999999866 99999999976
Q ss_pred C-eeeEEEeecCCCC
Q psy16023 383 N-VMNIRQFNCSPHP 396 (416)
Q Consensus 383 ~-~~~~~~f~~~~~p 396 (416)
+ ..++.||+.||.+
T Consensus 291 ~~~~~f~q~~psp~k 305 (319)
T KOG0371|consen 291 TKNYDFLQFDPSPRK 305 (319)
T ss_pred ccCcceEEecCCccc
Confidence 5 6899999998753
No 17
>KOG0377|consensus
Probab=100.00 E-value=7.5e-54 Score=425.37 Aligned_cols=283 Identities=27% Similarity=0.419 Sum_probs=248.7
Q ss_pred CCCCChHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceec----CCcceecCCcccHHHHHHHHHhcCCCCC-ce
Q psy16023 58 TGKPRPDVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIE----APVTVCGDIHGQFYDLMKLFEVGGPPAS-TK 132 (416)
Q Consensus 58 ~~~p~~~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~----~~i~VvGDIHG~~~dL~~ll~~~g~~~~-~~ 132 (416)
..++..+.|.+.|....++++..++.|+.+|+++|++.||+-+++ ..|+||||+||.++||.-+|-..|.|+. ..
T Consensus 116 l~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~np 195 (631)
T KOG0377|consen 116 LRKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNP 195 (631)
T ss_pred cCchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCC
Confidence 357788999999999999999999999999999999999998874 5699999999999999999999999876 45
Q ss_pred eeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhh---hhhHHHHHHHHhhccCceE
Q psy16023 133 YLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKY---SERVYDACMDAFDCLPLAA 209 (416)
Q Consensus 133 ~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~---~~~~~~~~~~~f~~LPlaa 209 (416)
|||.||+||||.+|+||+..|+++-+.||+.+|+-|||||+..||..|||-.|+..+| +.++...+.++|++||++.
T Consensus 196 YvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~t 275 (631)
T KOG0377|consen 196 YVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGT 275 (631)
T ss_pred eeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhh
Confidence 9999999999999999999999999999999999999999999999999999999999 4678899999999999999
Q ss_pred EEeCcEEEEeCCCCCCCCCHHHHHhhcCCCC-----CC--------------C-----cccccccCceecCCCCCcCCCC
Q psy16023 210 LMNQQFLCVHGGLSPEIHNLDDIRKTDSKSH-----PL--------------S-----DQCVIYCGQTHSSNINLTNNRH 265 (416)
Q Consensus 210 ~i~~~il~vHgGisp~~~~l~~i~~i~r~~~-----~~--------------~-----~~~dl~~~~LWsDP~~~~~~~~ 265 (416)
+++.++|+|||||| +.++++-+.+|+|... || | .+.|+ +||||....+.
T Consensus 276 iid~~ilvvHGGiS-d~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DI----mWSDP~~~~GC-- 348 (631)
T KOG0377|consen 276 IIDSRILVVHGGIS-DSTDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDI----MWSDPQATMGC-- 348 (631)
T ss_pred hcccceEEEecCcc-cchhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHH----HhcCcccccCC--
Confidence 99999999999998 5666777887776432 22 1 12356 99999876554
Q ss_pred CCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhh
Q psy16023 266 KPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALE 343 (416)
Q Consensus 266 ~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~ 343 (416)
.+|.-||.|.+||+ | ++.+||+ +|.++||+|||.++||||.|
T Consensus 349 -----------~pNt~RGgG~yFGp------------D-------------vT~~~Lqk~~l~~liRSHECKpeGyEf~H 392 (631)
T KOG0377|consen 349 -----------VPNTLRGGGCYFGP------------D-------------VTDNFLQKHRLSYLIRSHECKPEGYEFCH 392 (631)
T ss_pred -----------CcccccCCcceeCc------------h-------------HHHHHHHHhCceeeeeecccCCCcceeee
Confidence 57889999999994 4 3589999 99999999999999999998
Q ss_pred hhhhccCCCeEEEEeCCCCCcccccCCCCceEEEEEEeCC-eeeEEEeecCC
Q psy16023 344 EVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLKYENN-VMNIRQFNCSP 394 (416)
Q Consensus 344 ~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~~~~~-~~~~~~f~~~~ 394 (416)
+ ++|+|||||+||-.. |.|+||.+++.+. +.-|.||-++-
T Consensus 393 d-------~kvlTiFSASNYYe~----GSNrGAYikl~~~~~PhfvQY~a~k 433 (631)
T KOG0377|consen 393 D-------NKVLTIFSASNYYEI----GSNRGAYIKLGNQLTPHFVQYQAAK 433 (631)
T ss_pred C-------CeEEEEEeccchhee----cCCCceEEEeCCCCCchHHHHHhhh
Confidence 5 389999999999654 4899999999776 56788887654
No 18
>KOG0376|consensus
Probab=100.00 E-value=4.1e-51 Score=413.82 Aligned_cols=284 Identities=32% Similarity=0.562 Sum_probs=257.5
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCcceecC----CcceecCCcccHHHHHHHHHhcCCCCC-ceeeeecc
Q psy16023 64 DVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDIEA----PVTVCGDIHGQFYDLMKLFEVGGPPAS-TKYLFLGD 138 (416)
Q Consensus 64 ~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~~~----~i~VvGDIHG~~~dL~~ll~~~g~~~~-~~~vfLGD 138 (416)
..++..+..+..++...+-+|+..+.++++++|++++++. .+.||||+|||+++++++|+..|.|+. ..|+|.||
T Consensus 171 k~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngd 250 (476)
T KOG0376|consen 171 KTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGD 250 (476)
T ss_pred HHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCc
Confidence 4455677888889999999999999999999999999864 489999999999999999998887765 56999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEEEeCcEEEE
Q psy16023 139 YVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCV 218 (416)
Q Consensus 139 yVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~v 218 (416)
+||||..|.|++..+++.++.+|+++|++|||||+..|+..|||.+|+..+|.++.+..+.+.|..||++.+++++++.+
T Consensus 251 fv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~ 330 (476)
T KOG0376|consen 251 FVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVM 330 (476)
T ss_pred eeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCC-CCCCCHHHHHhhcCCCCCC--CcccccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccc
Q psy16023 219 HGGLS-PEIHNLDDIRKTDSKSHPL--SDQCVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKI 295 (416)
Q Consensus 219 HgGis-p~~~~l~~i~~i~r~~~~~--~~~~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l 295 (416)
|||+. |.-.+++|+++|.|+..++ +.+|++ |||||....+. .+|.||.|..||.
T Consensus 331 hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~----lws~pq~~~g~--------------s~S~r~~g~~fG~----- 387 (476)
T KOG0376|consen 331 HGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCEL----LWSDPQPANGR--------------SPSKRGVGLQFGP----- 387 (476)
T ss_pred ecCcCCCCCccHHHHHhhhhccCCccccccccc----ccCCCccccCC--------------CccccCceeeeCC-----
Confidence 99994 5567899999999997777 889999 99999876554 2578999999984
Q ss_pred cccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCc
Q psy16023 296 SAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVV 373 (416)
Q Consensus 296 ~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N 373 (416)
|+ +..||+ ||+.||||||+.++||++.++ ++|+|||||||||+.. +|
T Consensus 388 -------d~-------------t~~f~~~n~l~~i~rshe~~d~gy~~eh~-------g~l~tvfsapnycd~~----~n 436 (476)
T KOG0376|consen 388 -------DV-------------TERFLQDNNLDKIIRSHEVKDEGYEVEHS-------GKLITVFSAPNYCDQM----GN 436 (476)
T ss_pred -------Cc-------------hhhHHhhcchHHHhhccccCCCceeeecC-------CcEEEEecCcchhhhc----CC
Confidence 32 489999 899999999999999999873 5999999999999998 99
Q ss_pred eEEEEEEe--CCeeeEEEeecCCCCCCCCc
Q psy16023 374 KAAVLKYE--NNVMNIRQFNCSPHPYWLPN 401 (416)
Q Consensus 374 ~~avl~~~--~~~~~~~~f~~~~~p~~~p~ 401 (416)
.||++.++ +++..+.+|+++|||-.-|-
T Consensus 437 ~ga~i~~~~~~~~p~~~~~e~vp~~~~~~m 466 (476)
T KOG0376|consen 437 KGAFIHLEPDDLTPNFYTFEAVPHPDVKPM 466 (476)
T ss_pred cceEEEecCCCCccceeecccCCCCCCCCc
Confidence 99999997 45789999999999987763
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=6.5e-32 Score=254.63 Aligned_cols=212 Identities=34% Similarity=0.422 Sum_probs=161.7
Q ss_pred ceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhh
Q psy16023 106 TVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQE 185 (416)
Q Consensus 106 ~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e 185 (416)
+|||||||++++|.++++..+.++.+++||||||||||+.+.+|+.++++++.. |.++++||||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999888888899999999999999999999999999877 8899999999999988766555433
Q ss_pred H---------hhhhhhhHHHHHHHHhhccCceEEEeC-cEEEEeCCCCCCCCCHHHHHhhcCCCCCCCcccccccCceec
Q psy16023 186 C---------KIKYSERVYDACMDAFDCLPLAALMNQ-QFLCVHGGLSPEIHNLDDIRKTDSKSHPLSDQCVIYCGQTHS 255 (416)
Q Consensus 186 ~---------~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~dl~~~~LWs 255 (416)
. .......++..+.+++..||+++.++. +++|||||++|......++... .......++ +|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~~~----~~~~~~~~~----lw~ 151 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIKEE----PEDQLPEDL----LWS 151 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhhcC----cccccceee----eec
Confidence 2 222345678889999999999988876 9999999999988755444310 011234566 999
Q ss_pred CCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhcccchhHHHHHHHh--ccceeeecCC
Q psy16023 256 SNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEAAPIFIVTEMLV--NVLNICSDDE 333 (416)
Q Consensus 256 DP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a~~~~~v~~Fl~--~l~~IIR~He 333 (416)
+|...... .....++. | ..+ +..|+. +.+.|||||+
T Consensus 152 r~~~~~~~-------------~~~~~~~~----~--------------------~~~-----~~~~~~~~~~~~ii~GHt 189 (225)
T cd00144 152 DPLELPGG-------------FGSSRRGG----G--------------------PDA-----VEWFLKKNGLKLIVRGHT 189 (225)
T ss_pred CCCCCCCC-------------CcCCCCCC----C--------------------HHH-----HHHHHHHCCCeEEEEcCc
Confidence 99754322 01223332 3 223 377887 7899999999
Q ss_pred cccCCchhhhhhhhccCCCeEEEEeCCCCCcccccCCCCceEEEEE
Q psy16023 334 LMSDGDDALEEVMQHAVIFSKIIISSPLSELTKHKTRGVVKAAVLK 379 (416)
Q Consensus 334 ~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~~~~~~~~N~~avl~ 379 (416)
++.+|+.... .++++||+|++.|++.. +|..+++.
T Consensus 190 ~~~~~~~~~~-------~~~~i~IDtg~~~~~~~----~~~l~~~~ 224 (225)
T cd00144 190 PVEEGYEFGH-------DGNLITIDSGCNYCGGG----GNKLAALV 224 (225)
T ss_pred cccCccEEcC-------CCCEEEEecCCcccCCC----CccEEEEe
Confidence 9999975322 13799999999998876 66666553
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.91 E-value=3.1e-24 Score=206.98 Aligned_cols=122 Identities=22% Similarity=0.451 Sum_probs=97.3
Q ss_pred CCcceecCCcccHHHHHHHHHhcCC---------CCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGP---------PASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHEC 173 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~---------~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~ 173 (416)
|+++||||||||++.|.++|+..+. +..+++|||||||||||+|.||+.+|+++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 5789999999999999999997554 456899999999999999999999999884 44589999999999
Q ss_pred ccchhccc-------hhhhHhhhh-------hhhHHHHHHHHhhccCceEEEe-CcEEEEeCCCCCCC
Q psy16023 174 RHLTEYFT-------FKQECKIKY-------SERVYDACMDAFDCLPLAALMN-QQFLCVHGGLSPEI 226 (416)
Q Consensus 174 ~~l~~~~g-------f~~e~~~~~-------~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGisp~~ 226 (416)
+.++...+ ...+....| ...+++.+.++|++||++..++ ++++|||||+.|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 87653321 112233333 1346788899999999997664 67999999998764
No 21
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.89 E-value=1.6e-23 Score=204.28 Aligned_cols=129 Identities=22% Similarity=0.360 Sum_probs=103.9
Q ss_pred CCcceecCCcccHHHHHHHHHhcC-CCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGG-PPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFT 181 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g-~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~g 181 (416)
|.++||||||||+++|.++|+... .+..++++||||+|||||+|+||+.++.++. +++++|+||||.+.+...++
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 578999999999999999999766 4567999999999999999999999998874 36889999999998877666
Q ss_pred hh-----hhHhhhhhhhHHHHHHHHhhccCceEEEe-CcEEEEeCCCCCCCCCHHHHHhhc
Q psy16023 182 FK-----QECKIKYSERVYDACMDAFDCLPLAALMN-QQFLCVHGGLSPEIHNLDDIRKTD 236 (416)
Q Consensus 182 f~-----~e~~~~~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGisp~~~~l~~i~~i~ 236 (416)
+. +.....+.....+.+.+|++.+|+..... .++++|||||+|.+. +++.....
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~-l~~a~~~a 136 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD-LQTAKECA 136 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc-HHHHHHHH
Confidence 52 22222234456788899999999996543 469999999999985 65555443
No 22
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.89 E-value=1.8e-23 Score=202.83 Aligned_cols=127 Identities=25% Similarity=0.342 Sum_probs=100.1
Q ss_pred cceecCCcccHHHHHHHHHhcCC-CCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchh
Q psy16023 105 VTVCGDIHGQFYDLMKLFEVGGP-PASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFK 183 (416)
Q Consensus 105 i~VvGDIHG~~~dL~~ll~~~g~-~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~ 183 (416)
++||||||||+++|.++|+..+. ++.++++||||||||||+|.||+++|++++ .++++|+||||.+.++..+++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 58999999999999999997664 568999999999999999999999999986 3799999999999877655542
Q ss_pred hh----Hhhh-hhhhHHHHHHHHhhccCceEEEeC-cEEEEeCCCCCCCCCHHHHHhhc
Q psy16023 184 QE----CKIK-YSERVYDACMDAFDCLPLAALMNQ-QFLCVHGGLSPEIHNLDDIRKTD 236 (416)
Q Consensus 184 ~e----~~~~-~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGisp~~~~l~~i~~i~ 236 (416)
.. .... ......+...+|++++|++..+++ ++++|||||+|.+. +++.....
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~-~~~~~~~a 134 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS-IEQALKLA 134 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC-HHHHHHHH
Confidence 11 1111 122334678899999999976654 89999999999884 55544433
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.88 E-value=9.3e-23 Score=195.16 Aligned_cols=122 Identities=23% Similarity=0.433 Sum_probs=96.4
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCC----------CCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPP----------ASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHE 172 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~----------~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE 172 (416)
|++.||||||||+.+|.++|+..+.. +.+++||||||||||++|.||+++|++++.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 58999999999999999999976543 3579999999999999999999999998643 36899999999
Q ss_pred cccchhccch-------hhhHhhhhh---hhHHHHHHHHhhccCceEEEe-CcEEEEeCCCCCCC
Q psy16023 173 CRHLTEYFTF-------KQECKIKYS---ERVYDACMDAFDCLPLAALMN-QQFLCVHGGLSPEI 226 (416)
Q Consensus 173 ~~~l~~~~gf-------~~e~~~~~~---~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGisp~~ 226 (416)
.+.++...+- ..++...+. .++.+.+.+||+.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9876533211 022233332 456778899999999997665 57999999988643
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.88 E-value=2.2e-22 Score=197.11 Aligned_cols=121 Identities=25% Similarity=0.352 Sum_probs=97.1
Q ss_pred CCcceecCCcccHHHHHHHHHhcCC-CCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGP-PASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFT 181 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~-~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~g 181 (416)
|+++||||||||+..|.++++..+. +..+.++||||||||||+|.||+.+|.++ +.++++|+||||.+.+...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 5799999999999999999997653 56789999999999999999999999887 347899999999988766555
Q ss_pred hhh----hHhhhh-hhhHHHHHHHHhhccCceEEE-eCcEEEEeCCCCCCCC
Q psy16023 182 FKQ----ECKIKY-SERVYDACMDAFDCLPLAALM-NQQFLCVHGGLSPEIH 227 (416)
Q Consensus 182 f~~----e~~~~~-~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGisp~~~ 227 (416)
... .....+ .....+.+.+|++.+|+...+ ++++++||||++|.+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~ 128 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD 128 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC
Confidence 421 111111 223456688999999998655 5689999999999874
No 25
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.87 E-value=3e-22 Score=190.50 Aligned_cols=115 Identities=23% Similarity=0.276 Sum_probs=89.2
Q ss_pred ceecCCcccHHHHHHHHHhcCCC--------CCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccch
Q psy16023 106 TVCGDIHGQFYDLMKLFEVGGPP--------ASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLT 177 (416)
Q Consensus 106 ~VvGDIHG~~~dL~~ll~~~g~~--------~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~ 177 (416)
+||||||||++.|.++|+..+.. +.+++|||||||||||+|.||+++|+++.. +.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 68999999999999999865532 467999999999999999999999999864 34799999999998764
Q ss_pred hccc------h---h--------hhHhhhhh--hhHHHHHHHHhhccCceEEEeCcEEEEeCCCC
Q psy16023 178 EYFT------F---K--------QECKIKYS--ERVYDACMDAFDCLPLAALMNQQFLCVHGGLS 223 (416)
Q Consensus 178 ~~~g------f---~--------~e~~~~~~--~~~~~~~~~~f~~LPlaa~i~~~il~vHgGis 223 (416)
...+ + . .+....+. .+.++.+.+||+.||++. ..++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~-~~~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFL-DLGGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEE-EECCEEEEECCcC
Confidence 2111 0 0 01222222 345678899999999995 4578999999986
No 26
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.87 E-value=5.4e-22 Score=187.02 Aligned_cols=116 Identities=27% Similarity=0.375 Sum_probs=89.6
Q ss_pred ceecCCcccHHHHHHHHHhcCC--------CCCceeeeeccCCCCCCChHHHHHHHHHhhhc---CCCeEEEeCCCcccc
Q psy16023 106 TVCGDIHGQFYDLMKLFEVGGP--------PASTKYLFLGDYVDRGYFSIECVLYLWALKLC---HPTTLFLLRGNHECR 174 (416)
Q Consensus 106 ~VvGDIHG~~~dL~~ll~~~g~--------~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~---~P~~v~lLRGNHE~~ 174 (416)
+||||||||+++|.++|+..+. .+.+.+||+||+||||+++.||+.+|+++... .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999997653 46789999999999999999999999998754 456899999999999
Q ss_pred cchhccchhhh-Hhhhhh------h---hHHHHHHHHhhccCceEEEeCcEEEEeCCC
Q psy16023 175 HLTEYFTFKQE-CKIKYS------E---RVYDACMDAFDCLPLAALMNQQFLCVHGGL 222 (416)
Q Consensus 175 ~l~~~~gf~~e-~~~~~~------~---~~~~~~~~~f~~LPlaa~i~~~il~vHgGi 222 (416)
.+...+.+... ...... . .....+.+|++.+|+...+ +++++||||+
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~ 137 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGL 137 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCc
Confidence 88654433211 110000 1 1123457999999999665 4689999999
No 27
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.84 E-value=5.9e-21 Score=186.84 Aligned_cols=130 Identities=25% Similarity=0.339 Sum_probs=98.5
Q ss_pred CcceecCCcccHHHHHHHHHhcC------CCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCC-eEEEeCCCcccccc
Q psy16023 104 PVTVCGDIHGQFYDLMKLFEVGG------PPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPT-TLFLLRGNHECRHL 176 (416)
Q Consensus 104 ~i~VvGDIHG~~~dL~~ll~~~g------~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~-~v~lLRGNHE~~~l 176 (416)
++++||||||+++.|.++|+... .+..+.+||||||||||++|.+|+++|++++..+|. .+++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 68999999999999999987322 123568999999999999999999999999998876 68899999997754
Q ss_pred hh--------------------------------------------ccc------------------h-hhhHhhhhh--
Q psy16023 177 TE--------------------------------------------YFT------------------F-KQECKIKYS-- 191 (416)
Q Consensus 177 ~~--------------------------------------------~~g------------------f-~~e~~~~~~-- 191 (416)
.- |.+ + ..+....|+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 21 110 0 123444553
Q ss_pred -------hhHHHHHHHHhhccCceEEEeCcE-------------EEEeCCCCCCCCCHHHHHh
Q psy16023 192 -------ERVYDACMDAFDCLPLAALMNQQF-------------LCVHGGLSPEIHNLDDIRK 234 (416)
Q Consensus 192 -------~~~~~~~~~~f~~LPlaa~i~~~i-------------l~vHgGisp~~~~l~~i~~ 234 (416)
..+.+...+|++.||+.. ..+++ +|||||+.|+..--+|.+.
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~-~~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~ 224 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVH-EEDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKL 224 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceE-EeCcccccccccccccceEEEEcccCCCCChHHhhhh
Confidence 134566789999999994 44556 9999999999874445544
No 28
>PHA02239 putative protein phosphatase
Probab=99.84 E-value=1.3e-20 Score=180.73 Aligned_cols=123 Identities=23% Similarity=0.312 Sum_probs=93.1
Q ss_pred CCcceecCCcccHHHHHHHHHhcCC--CCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhc-
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGP--PASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEY- 179 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~--~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~- 179 (416)
|++++||||||++..|.++++.... .+.+.+||||||||||++|.+|+..|+++.. .+.++++|+||||.+.+...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 5789999999999999999986532 2468999999999999999999999998754 45579999999999865321
Q ss_pred ------------cch-hhhHhhhhh-------------------------------hhHHHHHHHHhhccCceEEEeCcE
Q psy16023 180 ------------FTF-KQECKIKYS-------------------------------ERVYDACMDAFDCLPLAALMNQQF 215 (416)
Q Consensus 180 ------------~gf-~~e~~~~~~-------------------------------~~~~~~~~~~f~~LPlaa~i~~~i 215 (416)
..+ ..++...|+ ...+..+..|++.||+. ...+++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~-~~~~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKY-YKEDKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcce-EEECCE
Confidence 111 123334442 01335566799999999 556789
Q ss_pred EEEeCCCCCCCC
Q psy16023 216 LCVHGGLSPEIH 227 (416)
Q Consensus 216 l~vHgGisp~~~ 227 (416)
+|||||+.|...
T Consensus 159 ifVHAGi~p~~~ 170 (235)
T PHA02239 159 IFSHSGGVSWKP 170 (235)
T ss_pred EEEeCCCCCCCC
Confidence 999999998754
No 29
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.83 E-value=1.1e-20 Score=179.07 Aligned_cols=115 Identities=23% Similarity=0.310 Sum_probs=88.0
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCC-CCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPP-ASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFT 181 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~g 181 (416)
++++||||||||+.+|.++|+..... ..++++||||||||||+|.||+++|.+. ++++|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHC
Confidence 58999999999999999999976654 6789999999999999999999998652 5789999999988753211
Q ss_pred h--------hhhHhhhh---hhhHHHHHHHHhhccCceEEE---eCcEEEEeCCCC
Q psy16023 182 F--------KQECKIKY---SERVYDACMDAFDCLPLAALM---NQQFLCVHGGLS 223 (416)
Q Consensus 182 f--------~~e~~~~~---~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGis 223 (416)
- ..+....+ ..+.+..+.++++.||+...+ ++++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 1 01111111 123455677999999999644 357999999984
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.81 E-value=1.3e-19 Score=170.28 Aligned_cols=118 Identities=26% Similarity=0.332 Sum_probs=91.3
Q ss_pred CCcceecCCcccHHHHHHHHHhcCC-CCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGP-PASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFT 181 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~-~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~g 181 (416)
++++|||||||++.+|.++++.... +..+.++|+|||||||+++.|++.+|.+ .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 4789999999999999999997664 4578999999999999999999998865 26899999999998765433
Q ss_pred h--hhhHhhh---------hhhhHHHHHHHHhhccCceEEEe---CcEEEEeCCCCCCC
Q psy16023 182 F--KQECKIK---------YSERVYDACMDAFDCLPLAALMN---QQFLCVHGGLSPEI 226 (416)
Q Consensus 182 f--~~e~~~~---------~~~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGisp~~ 226 (416)
- ..+.... +..++++...+||+.||+...++ .++++||||+++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~ 133 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD 133 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch
Confidence 1 1111111 12235666889999999997664 47999999996543
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.76 E-value=1.8e-18 Score=164.24 Aligned_cols=115 Identities=22% Similarity=0.314 Sum_probs=85.7
Q ss_pred CCcceecCCcccHHHHHHHHHhcC-CCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGG-PPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFT 181 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g-~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~g 181 (416)
.+++||||||||+.+|.++++... .+..++++|||||||||++|.||+.+|.+ .++++||||||.+.+.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 489999999999999999998765 45678999999999999999999998864 26889999999987743211
Q ss_pred --------hhhhHhhhhh---hhHHHHHHHHhhccCceEEEe---CcEEEEeCCCC
Q psy16023 182 --------FKQECKIKYS---ERVYDACMDAFDCLPLAALMN---QQFLCVHGGLS 223 (416)
Q Consensus 182 --------f~~e~~~~~~---~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGis 223 (416)
...+....+. .........+++.||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 0001111111 123344567899999996553 46899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.15 E-value=1.2e-10 Score=100.05 Aligned_cols=75 Identities=28% Similarity=0.365 Sum_probs=58.1
Q ss_pred CCcceecCCcccHHHH----HHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHH--HHhhhcCCCeEEEeCCCcccccc
Q psy16023 103 APVTVCGDIHGQFYDL----MKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYL--WALKLCHPTTLFLLRGNHECRHL 176 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL----~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL--~~lk~~~P~~v~lLRGNHE~~~l 176 (416)
++|+++||+|+..... ..+.........+.+|++||++|+|..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4789999999999987 44444445567789999999999999988777654 44455566689999999999865
Q ss_pred h
Q psy16023 177 T 177 (416)
Q Consensus 177 ~ 177 (416)
.
T Consensus 81 ~ 81 (200)
T PF00149_consen 81 N 81 (200)
T ss_dssp H
T ss_pred c
Confidence 3
No 33
>PRK09453 phosphodiesterase; Provisional
Probab=99.06 E-value=4e-10 Score=103.62 Aligned_cols=69 Identities=20% Similarity=0.246 Sum_probs=55.6
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCC--------hHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYF--------SIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~--------s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
|++.|+||+||++.++.++++.......+.++++||++|+|+. ..+++..|..+. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 6899999999999999998886544567899999999999873 466777665442 3689999999975
Q ss_pred c
Q psy16023 175 H 175 (416)
Q Consensus 175 ~ 175 (416)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 34
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.88 E-value=5.7e-09 Score=92.85 Aligned_cols=83 Identities=27% Similarity=0.375 Sum_probs=62.4
Q ss_pred CcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchh
Q psy16023 104 PVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFK 183 (416)
Q Consensus 104 ~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~ 183 (416)
++.++||+||+...+.++++.... .+.++++||+++++..+. +. ....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~--~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LE--LKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hh--cCCcEEEEeCCCCCcCC-------
Confidence 478999999999999999986543 689999999999998765 11 12368999999997532
Q ss_pred hhHhhhhhhhHHHHHHHHhhccCceEEE--e-CcEEEEeCCCC
Q psy16023 184 QECKIKYSERVYDACMDAFDCLPLAALM--N-QQFLCVHGGLS 223 (416)
Q Consensus 184 ~e~~~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGis 223 (416)
+..+|....+ + .+++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 3456655433 2 37999998764
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.80 E-value=1.2e-08 Score=91.64 Aligned_cols=63 Identities=19% Similarity=0.178 Sum_probs=48.8
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCC-CCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPP-ASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
|++.|++|+||++.++..+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 67999999999998777666643333 678999999999 457777775542 2489999999973
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.79 E-value=1.5e-08 Score=89.26 Aligned_cols=61 Identities=26% Similarity=0.442 Sum_probs=46.9
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCccccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
|+|+++||+|++...+.++++.. ...+.++++||++|+ .+++..+..+ .+++++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 68999999999999999999876 347899999999993 7777777555 6999999999654
No 37
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.68 E-value=1.4e-08 Score=87.55 Aligned_cols=141 Identities=23% Similarity=0.220 Sum_probs=102.0
Q ss_pred chhccchhhhHhhhhhhh-HHHH---HHHHhhccCceEEEeC-cEEEEeCCCCCCC-CCHHHHHhhcCCC--CCC--Ccc
Q psy16023 176 LTEYFTFKQECKIKYSER-VYDA---CMDAFDCLPLAALMNQ-QFLCVHGGLSPEI-HNLDDIRKTDSKS--HPL--SDQ 245 (416)
Q Consensus 176 l~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPlaa~i~~-~il~vHgGisp~~-~~l~~i~~i~r~~--~~~--~~~ 245 (416)
++..+++.+++...++.. .|.. +.++|+.||+.+++.+ .++|.||+++|.+ ..+++++.+.|.. +.+ |..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 345567777777766654 4555 9999999999998888 9999999999976 7788888888766 333 777
Q ss_pred cccccCceecCCCCCcCCCCCCCccccCCCCCCCCCCcceEEeCCCcccccccccCCcchhhhhcccchhHHHHHHHh--
Q psy16023 246 CVIYCGQTHSSNINLTNNRHKPSVLFTTDSKSHPLSDQCVIYCGQTHSKISAMKRTPNILVTIVYEAAPIFIVTEMLV-- 323 (416)
Q Consensus 246 ~dl~~~~LWsDP~~~~~~~~~~~~~~~~~~f~~~~~rG~~~~fG~~~~~l~~~~~~~~~~~~~~~~a~~~~~v~~Fl~-- 323 (416)
++. +|++|... .. ..+.+..+|.+..++ + .+..|+.
T Consensus 83 ~~~----~~~~~~~~-~~-----------~~w~~~~~g~~~~~~-------------~-------------~~~~f~~~~ 120 (155)
T COG0639 83 HDL----LWSDPDGG-DR-----------RIWNPGPRGVPRDGG-------------D-------------VTAVFGIVH 120 (155)
T ss_pred ccc----cCCCCCCC-cc-----------cccccCCCCCCcccc-------------c-------------hhhHHhhhc
Confidence 777 99988753 00 012355778776551 1 1256663
Q ss_pred ccceeeecCCcccCCchhhhhhhhccCCCeEEEEeCCCCCcc
Q psy16023 324 NVLNICSDDELMSDGDDALEEVMQHAVIFSKIIISSPLSELT 365 (416)
Q Consensus 324 ~l~~IIR~He~~~~Gy~~~~~~~~~~~~~~~iTvfSapnY~~ 365 (416)
....|.|+|+..+.++...... ..+|.||+++||.
T Consensus 121 ~~~~~~~~~~~~~~d~~~~~~~-------~~lt~~~~~~~~~ 155 (155)
T COG0639 121 TPKLIERAHVLYDIDTGAVFGG-------GLLTAFSAPNYCY 155 (155)
T ss_pred ccceEEEEeEEEecCceEEeCC-------CeeeEEecccccC
Confidence 3444999999999999876621 5899999999973
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.65 E-value=7.6e-08 Score=92.64 Aligned_cols=111 Identities=23% Similarity=0.276 Sum_probs=71.7
Q ss_pred CcceecCCcccHHHHH-HHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhc---
Q psy16023 104 PVTVCGDIHGQFYDLM-KLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEY--- 179 (416)
Q Consensus 104 ~i~VvGDIHG~~~dL~-~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~--- 179 (416)
+|+++|||||++.... +.++. ...|.++++||+++ .+.+++..|.++. + .+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSLP--L--PKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhCC--C--CeEEEcCCCcccccccccch
Confidence 5889999999987642 23332 23589999999986 4577777766552 3 58999999998653210
Q ss_pred c---------------c-----h----------------------hhhHhhhhh-hhHHHHHHHHhhccCceEEEeCcEE
Q psy16023 180 F---------------T-----F----------------------KQECKIKYS-ERVYDACMDAFDCLPLAALMNQQFL 216 (416)
Q Consensus 180 ~---------------g-----f----------------------~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~il 216 (416)
+ + | ..++...|+ ....+++...++.++.+.-....||
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 0 0 013444443 2455667777888864333344799
Q ss_pred EEeCCCCC
Q psy16023 217 CVHGGLSP 224 (416)
Q Consensus 217 ~vHgGisp 224 (416)
+.|++++-
T Consensus 152 iaH~~~~G 159 (238)
T cd07397 152 LAHNGPSG 159 (238)
T ss_pred EeCcCCcC
Confidence 99999863
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.55 E-value=1.3e-07 Score=90.38 Aligned_cols=71 Identities=14% Similarity=0.227 Sum_probs=57.6
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+++.+++||||++..|.++++.....+.|.+|++||++++|+..-++..++..+... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 579999999999999999998655456789999999999997666666666655432 23689999999975
No 40
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.46 E-value=6.1e-07 Score=75.10 Aligned_cols=67 Identities=28% Similarity=0.393 Sum_probs=50.9
Q ss_pred ceecCCcccHHHHHHHH--HhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcc
Q psy16023 106 TVCGDIHGQFYDLMKLF--EVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHE 172 (416)
Q Consensus 106 ~VvGDIHG~~~dL~~ll--~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE 172 (416)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 47999999998888765 34444566899999999999988777655433333345557999999999
No 41
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.43 E-value=3.8e-07 Score=79.65 Aligned_cols=61 Identities=23% Similarity=0.424 Sum_probs=42.9
Q ss_pred CcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChH--HHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 104 PVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSI--ECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 104 ~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~--evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
++.++||+||++. .+ .....+.+|++||++++|..+. +.+.++..+. .| .+++++||||..
T Consensus 1 ~i~~isD~H~~~~----~~---~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR----TI---SIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC----cC---cCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCc
Confidence 4789999999987 11 2345689999999999986542 3445554432 22 367899999964
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.27 E-value=1.3e-06 Score=79.27 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=46.8
Q ss_pred cceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCCh-HHHHHHHHHhhhcCCCeEEEeCCCccccc
Q psy16023 105 VTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFS-IECVLYLWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 105 i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s-~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
|+++|||||++..+.. ........|.+|+.||++++|... .+.+..|.+ .+..+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998876 222234568999999999998763 333333333 2346899999999753
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.21 E-value=5.7e-06 Score=76.30 Aligned_cols=59 Identities=25% Similarity=0.365 Sum_probs=43.0
Q ss_pred CcceecCCc-ccHH-----HHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 104 PVTVCGDIH-GQFY-----DLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 104 ~i~VvGDIH-G~~~-----dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
.|.||+|+| |.-. .+.++++. .+.+.++++||+++ .+++.+|..+. + .++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCcc
Confidence 378999999 5533 34555543 45689999999987 67777776552 2 589999999963
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.09 E-value=3.1e-06 Score=76.24 Aligned_cols=67 Identities=21% Similarity=0.171 Sum_probs=48.0
Q ss_pred cceecCCcccHHHHHHHH-HhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 105 VTVCGDIHGQFYDLMKLF-EVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 105 i~VvGDIHG~~~dL~~ll-~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+.+++|||+....+...+ +.......+.++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 468999999987776654 2233456689999999999987665543 2222 22345799999999986
No 45
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.07 E-value=5.3e-06 Score=77.89 Aligned_cols=70 Identities=23% Similarity=0.262 Sum_probs=51.6
Q ss_pred CCcceecCCcccHH----HHHHHHHhcCCCCCceeeeeccCCCCCCChH-HHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 103 APVTVCGDIHGQFY----DLMKLFEVGGPPASTKYLFLGDYVDRGYFSI-ECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 103 ~~i~VvGDIHG~~~----dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~-evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+++++++|+|+... .+.++++.......+.++++||++|.+.... ++..++..+.. +..++++.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCcccc
Confidence 57899999998743 5666666444445678999999999987765 55555554432 34689999999975
No 46
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.02 E-value=1e-05 Score=79.39 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=51.6
Q ss_pred CCcceecCCccc----HHHHHHHHHhcCCCCCceeeeeccCCCCC--CChHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 103 APVTVCGDIHGQ----FYDLMKLFEVGGPPASTKYLFLGDYVDRG--YFSIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 103 ~~i~VvGDIHG~----~~dL~~ll~~~g~~~~~~~vfLGDyVDRG--~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+++++++|||.. ...+.++++.......|-++++||++|.+ ....++...|..++... .++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCcc
Confidence 579999999976 45567777654445668999999999954 23345666676676544 499999999964
No 47
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.87 E-value=2.2e-05 Score=75.47 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=49.2
Q ss_pred CCcceecCCccc------HHHHHHHHHhcCCCCCceeeeeccCCCC-------CCChHHHHHHHHHhhhcCCCeEEEeCC
Q psy16023 103 APVTVCGDIHGQ------FYDLMKLFEVGGPPASTKYLFLGDYVDR-------GYFSIECVLYLWALKLCHPTTLFLLRG 169 (416)
Q Consensus 103 ~~i~VvGDIHG~------~~dL~~ll~~~g~~~~~~~vfLGDyVDR-------G~~s~evl~lL~~lk~~~P~~v~lLRG 169 (416)
|++++++|+|.. ...+.+.++.. ....+.++++||++|. .+...+++..|..+... +-.+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 689999999954 22455555432 2356899999999985 23346677777777543 247999999
Q ss_pred Ccccc
Q psy16023 170 NHECR 174 (416)
Q Consensus 170 NHE~~ 174 (416)
|||..
T Consensus 79 NHD~~ 83 (241)
T PRK05340 79 NRDFL 83 (241)
T ss_pred CCchh
Confidence 99964
No 48
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.85 E-value=3.5e-05 Score=67.23 Aligned_cols=56 Identities=20% Similarity=0.209 Sum_probs=41.1
Q ss_pred ceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcc
Q psy16023 106 TVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHE 172 (416)
Q Consensus 106 ~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE 172 (416)
.|++|.||....+.++... ..+.+.++++||+. .+++..+..+. ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 4899999998777776654 45678999999984 34555555541 224889999999
No 49
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.82 E-value=6.6e-05 Score=73.53 Aligned_cols=69 Identities=20% Similarity=0.358 Sum_probs=45.9
Q ss_pred cceecCCcccHHHHHHHHH---hcCCCCCceeeeeccCCCCCC-ChHHHH-------------HHHHHhhhcCCCeEEEe
Q psy16023 105 VTVCGDIHGQFYDLMKLFE---VGGPPASTKYLFLGDYVDRGY-FSIECV-------------LYLWALKLCHPTTLFLL 167 (416)
Q Consensus 105 i~VvGDIHG~~~dL~~ll~---~~g~~~~~~~vfLGDyVDRG~-~s~evl-------------~lL~~lk~~~P~~v~lL 167 (416)
|+|+||+||+++.+.+.++ .....+.+-+|++||+-..+. ...+.+ .++-. ....|--+++|
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEEEE
Confidence 6899999999998876443 222346789999999965443 233222 11111 22356668999
Q ss_pred CCCcccc
Q psy16023 168 RGNHECR 174 (416)
Q Consensus 168 RGNHE~~ 174 (416)
-||||..
T Consensus 80 ~GNHE~~ 86 (262)
T cd00844 80 GGNHEAS 86 (262)
T ss_pred CCCCCCH
Confidence 9999974
No 50
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.75 E-value=4.8e-05 Score=72.89 Aligned_cols=68 Identities=18% Similarity=0.127 Sum_probs=48.9
Q ss_pred CcceecCCcccH------HHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 104 PVTVCGDIHGQF------YDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 104 ~i~VvGDIHG~~------~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+|++++|+|+.+ ..|.++++.......+.+|+.||++++++.+.+++..|.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999653 22555666444456789999999999876666666655543 334699999999964
No 51
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.75 E-value=9.3e-05 Score=67.48 Aligned_cols=57 Identities=21% Similarity=0.171 Sum_probs=33.8
Q ss_pred HHHHHHhcCCCCCceeeeeccCCCCCCCh--HHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 118 LMKLFEVGGPPASTKYLFLGDYVDRGYFS--IECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 118 L~~ll~~~g~~~~~~~vfLGDyVDRG~~s--~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+.++.+.....+.+.+|++||++|....+ .+....-.......+..+++++||||..
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 34444433334568999999999865432 2222210111223445799999999975
No 52
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.74 E-value=0.0001 Score=64.49 Aligned_cols=68 Identities=22% Similarity=0.215 Sum_probs=42.6
Q ss_pred cceecCCcccHH----------HHHHHHHhcCCCCCceeeeeccCCCCCCCh-H-HHHHHHHHhhhcCCCeEEEeCCCcc
Q psy16023 105 VTVCGDIHGQFY----------DLMKLFEVGGPPASTKYLFLGDYVDRGYFS-I-ECVLYLWALKLCHPTTLFLLRGNHE 172 (416)
Q Consensus 105 i~VvGDIHG~~~----------dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s-~-evl~lL~~lk~~~P~~v~lLRGNHE 172 (416)
|+.++|+|=... .|.++++.......+.++++||+++.|..+ . +...++..+.... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 122344444445678999999999998742 1 2334444443321 26899999999
Q ss_pred c
Q psy16023 173 C 173 (416)
Q Consensus 173 ~ 173 (416)
.
T Consensus 80 ~ 80 (144)
T cd07400 80 V 80 (144)
T ss_pred E
Confidence 7
No 53
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.72 E-value=8.9e-05 Score=67.40 Aligned_cols=67 Identities=21% Similarity=0.226 Sum_probs=43.8
Q ss_pred cceecCCcccHHHH---------------HHHHHh--cCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEe
Q psy16023 105 VTVCGDIHGQFYDL---------------MKLFEV--GGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLL 167 (416)
Q Consensus 105 i~VvGDIHG~~~dL---------------~~ll~~--~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lL 167 (416)
+++++|+|=..... ..+++. ....+.+.+|++||++++|..+.. +..+.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 36788888654432 223331 113356899999999999987644 4444433 3469999
Q ss_pred CCCcccccc
Q psy16023 168 RGNHECRHL 176 (416)
Q Consensus 168 RGNHE~~~l 176 (416)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997643
No 54
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.65 E-value=0.0001 Score=71.90 Aligned_cols=73 Identities=18% Similarity=0.134 Sum_probs=47.4
Q ss_pred CcceecCCc-cc------------HHHHHHHHHhcCCCCCceeeeeccCCCCCCC-hHHHHHHHHHhhhcCCCeEEEeCC
Q psy16023 104 PVTVCGDIH-GQ------------FYDLMKLFEVGGPPASTKYLFLGDYVDRGYF-SIECVLYLWALKLCHPTTLFLLRG 169 (416)
Q Consensus 104 ~i~VvGDIH-G~------------~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~-s~evl~lL~~lk~~~P~~v~lLRG 169 (416)
++++++|+| +. ...|.++++.......+.+|++||+++.|.. +.+-+..+.+.-...+-.++++.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 578999999 21 3456666664433346889999999998873 223333333322223346999999
Q ss_pred Ccccccc
Q psy16023 170 NHECRHL 176 (416)
Q Consensus 170 NHE~~~l 176 (416)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 55
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.65 E-value=8.7e-05 Score=75.20 Aligned_cols=72 Identities=25% Similarity=0.320 Sum_probs=48.7
Q ss_pred CCcceecCCc-c-----------cHHHHHHHHHhcCCCCCceeeeeccCCCCC-CChHHHHHHHHH----hhhcCCCeEE
Q psy16023 103 APVTVCGDIH-G-----------QFYDLMKLFEVGGPPASTKYLFLGDYVDRG-YFSIECVLYLWA----LKLCHPTTLF 165 (416)
Q Consensus 103 ~~i~VvGDIH-G-----------~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG-~~s~evl~lL~~----lk~~~P~~v~ 165 (416)
|+++.++|+| | +...|.++++.+.....+.+|+.||++|+. +.+.+++.++.. .-...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6789999999 3 234556666655455668999999999985 444444443322 2122345799
Q ss_pred EeCCCcccc
Q psy16023 166 LLRGNHECR 174 (416)
Q Consensus 166 lLRGNHE~~ 174 (416)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 56
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.59 E-value=0.00019 Score=66.00 Aligned_cols=101 Identities=18% Similarity=0.179 Sum_probs=65.2
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccch
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTF 182 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf 182 (416)
|++.|++|+||...+..+..+.......+.+|.+||++...... .+-. .....++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcccc-----
Confidence 67999999999997656666655556778999999999875432 1111 0234799999999976322
Q ss_pred hhhHhhhhhhhHHHHHHHHhhccCceEE--Ee-CcEEEEeCCCCCCCCCHHHHHhhc
Q psy16023 183 KQECKIKYSERVYDACMDAFDCLPLAAL--MN-QQFLCVHGGLSPEIHNLDDIRKTD 236 (416)
Q Consensus 183 ~~e~~~~~~~~~~~~~~~~f~~LPlaa~--i~-~~il~vHgGisp~~~~l~~i~~i~ 236 (416)
..+|-..+ ++ -+++++||..-..-.+...+..+.
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~~~~~~l~~la 105 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFVKTDLSLLEYLA 105 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCccccccCHHHHHHHH
Confidence 23333322 23 489999996643223344444443
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.58 E-value=0.00013 Score=70.95 Aligned_cols=72 Identities=21% Similarity=0.261 Sum_probs=49.7
Q ss_pred CCcceecCCcc-c-----------HHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHH----HHHHHhhhcCCCeEEE
Q psy16023 103 APVTVCGDIHG-Q-----------FYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECV----LYLWALKLCHPTTLFL 166 (416)
Q Consensus 103 ~~i~VvGDIHG-~-----------~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl----~lL~~lk~~~P~~v~l 166 (416)
|+++.++|+|- . ...|.++++..-....+.+|+.||++|+...+.+.. .+|..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 234555655444446789999999999886654432 3444444433357999
Q ss_pred eCCCcccc
Q psy16023 167 LRGNHECR 174 (416)
Q Consensus 167 LRGNHE~~ 174 (416)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 58
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.54 E-value=0.0003 Score=67.37 Aligned_cols=69 Identities=17% Similarity=0.155 Sum_probs=44.3
Q ss_pred CCcceecCCc-ccHH----------------HHHHHHHhcCCCCCceeeeeccCCCCCCCh---HHHHHHHHHhhhcCCC
Q psy16023 103 APVTVCGDIH-GQFY----------------DLMKLFEVGGPPASTKYLFLGDYVDRGYFS---IECVLYLWALKLCHPT 162 (416)
Q Consensus 103 ~~i~VvGDIH-G~~~----------------dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s---~evl~lL~~lk~~~P~ 162 (416)
..+.||+|+| |.-. .|.++.+.......+.+|++||+.+....+ .++..++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 5688999999 5322 233333333444568999999999765542 23333443332 3
Q ss_pred eEEEeCCCccccc
Q psy16023 163 TLFLLRGNHECRH 175 (416)
Q Consensus 163 ~v~lLRGNHE~~~ 175 (416)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999763
No 59
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.46 E-value=0.0003 Score=66.70 Aligned_cols=67 Identities=31% Similarity=0.374 Sum_probs=44.9
Q ss_pred CcceecCCccc------------HHHHHHHHHhcCC--CCCceeeeeccCCCCCCC-hHH-HHHHHHHhhhcCCCeEEEe
Q psy16023 104 PVTVCGDIHGQ------------FYDLMKLFEVGGP--PASTKYLFLGDYVDRGYF-SIE-CVLYLWALKLCHPTTLFLL 167 (416)
Q Consensus 104 ~i~VvGDIHG~------------~~dL~~ll~~~g~--~~~~~~vfLGDyVDRG~~-s~e-vl~lL~~lk~~~P~~v~lL 167 (416)
++++++|+|=. ...|.++++.... +..+-+|++||+++.|.. ..+ ++..+..+ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 47899999944 3456677763322 467899999999998753 222 22333222 4468999
Q ss_pred CCCcccc
Q psy16023 168 RGNHECR 174 (416)
Q Consensus 168 RGNHE~~ 174 (416)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 60
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.44 E-value=0.00021 Score=68.23 Aligned_cols=68 Identities=10% Similarity=0.114 Sum_probs=44.1
Q ss_pred cceecCCcccH------HHHHHHHHhcCCCCCceeeeeccCCCCC-----CC--hHHHHHHHHHhhhcCCCeEEEeCCCc
Q psy16023 105 VTVCGDIHGQF------YDLMKLFEVGGPPASTKYLFLGDYVDRG-----YF--SIECVLYLWALKLCHPTTLFLLRGNH 171 (416)
Q Consensus 105 i~VvGDIHG~~------~dL~~ll~~~g~~~~~~~vfLGDyVDRG-----~~--s~evl~lL~~lk~~~P~~v~lLRGNH 171 (416)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++...|..+... +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999542 234444443211 568999999999952 11 23456666666533 34799999999
Q ss_pred ccc
Q psy16023 172 ECR 174 (416)
Q Consensus 172 E~~ 174 (416)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 964
No 61
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.38 E-value=0.00026 Score=66.05 Aligned_cols=73 Identities=22% Similarity=0.246 Sum_probs=47.9
Q ss_pred CcceecCCc-cc--------------HHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcC---CCeEE
Q psy16023 104 PVTVCGDIH-GQ--------------FYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCH---PTTLF 165 (416)
Q Consensus 104 ~i~VvGDIH-G~--------------~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~---P~~v~ 165 (416)
+++.++|+| |. +..|.++++.......+.+|+.||++|....+.+.+..+...-... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 478899999 32 1235666665444566789999999998765544433333322121 34689
Q ss_pred EeCCCcccccc
Q psy16023 166 LLRGNHECRHL 176 (416)
Q Consensus 166 lLRGNHE~~~l 176 (416)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999997654
No 62
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.36 E-value=0.00047 Score=67.50 Aligned_cols=71 Identities=14% Similarity=0.050 Sum_probs=47.1
Q ss_pred cCCcceecCCcc------------cHHHHHHHHHhc-C-CCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEe
Q psy16023 102 EAPVTVCGDIHG------------QFYDLMKLFEVG-G-PPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLL 167 (416)
Q Consensus 102 ~~~i~VvGDIHG------------~~~dL~~ll~~~-g-~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lL 167 (416)
+++++.++|+|= ....|.++++.. . .+..+.+|+.||++|.|. .+-+..+.+.-...+..++++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 367999999991 135577777632 2 245688999999999874 233333333222334569999
Q ss_pred CCCcccc
Q psy16023 168 RGNHECR 174 (416)
Q Consensus 168 RGNHE~~ 174 (416)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 63
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.34 E-value=0.00028 Score=75.29 Aligned_cols=71 Identities=21% Similarity=0.378 Sum_probs=44.2
Q ss_pred CCcceecCCc-ccH----HHHHHHHH-hcCC--------CCCceeeeeccCCCC-CCCh---------------HHHHHH
Q psy16023 103 APVTVCGDIH-GQF----YDLMKLFE-VGGP--------PASTKYLFLGDYVDR-GYFS---------------IECVLY 152 (416)
Q Consensus 103 ~~i~VvGDIH-G~~----~dL~~ll~-~~g~--------~~~~~~vfLGDyVDR-G~~s---------------~evl~l 152 (416)
..+++++|+| |.. ..+..+++ ..|. ...+.+|++||++|. |.+. .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4588999999 652 22344443 2222 234789999999994 3211 134555
Q ss_pred HHHhhhcCCCeEEEeCCCccccc
Q psy16023 153 LWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 153 L~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
|.++.. .-.+++++||||...
T Consensus 324 L~~L~~--~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 324 LKQIPE--DIKIIISPGNHDAVR 344 (504)
T ss_pred HHhhhc--CCeEEEecCCCcchh
Confidence 555532 236999999999754
No 64
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.25 E-value=0.00069 Score=62.98 Aligned_cols=70 Identities=13% Similarity=0.011 Sum_probs=44.7
Q ss_pred CCcceecCCcccHH------------HHHHHHHhcCCCCCceeeeeccCCCCCCC---hHHHHHHHHHhhhcCCCeEEEe
Q psy16023 103 APVTVCGDIHGQFY------------DLMKLFEVGGPPASTKYLFLGDYVDRGYF---SIECVLYLWALKLCHPTTLFLL 167 (416)
Q Consensus 103 ~~i~VvGDIHG~~~------------dL~~ll~~~g~~~~~~~vfLGDyVDRG~~---s~evl~lL~~lk~~~P~~v~lL 167 (416)
.++++++|+|-... .+..+.+.......+.+|++||+++.+.. +.+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46889999996322 11222222223456889999999997765 3555555554333333468999
Q ss_pred CCCcc
Q psy16023 168 RGNHE 172 (416)
Q Consensus 168 RGNHE 172 (416)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 65
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.24 E-value=0.00047 Score=62.20 Aligned_cols=48 Identities=25% Similarity=0.261 Sum_probs=30.5
Q ss_pred CCCceeeeeccCCCCCCCh-HH----HHHHHHHhhhcC-CCeEEEeCCCccccc
Q psy16023 128 PASTKYLFLGDYVDRGYFS-IE----CVLYLWALKLCH-PTTLFLLRGNHECRH 175 (416)
Q Consensus 128 ~~~~~~vfLGDyVDRG~~s-~e----vl~lL~~lk~~~-P~~v~lLRGNHE~~~ 175 (416)
...+.+|++||++|.+..+ .+ .+..+.++.... +-.++++.||||...
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4568999999999987642 12 222222222112 246999999999753
No 66
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.17 E-value=0.00076 Score=63.80 Aligned_cols=69 Identities=22% Similarity=0.125 Sum_probs=42.0
Q ss_pred CcceecCCcccHH----HH----HHHHHhcCCCCCceeeeeccCCCCCCChH--HH-HHHHHHhhhcCCCeEEEeCCCcc
Q psy16023 104 PVTVCGDIHGQFY----DL----MKLFEVGGPPASTKYLFLGDYVDRGYFSI--EC-VLYLWALKLCHPTTLFLLRGNHE 172 (416)
Q Consensus 104 ~i~VvGDIHG~~~----dL----~~ll~~~g~~~~~~~vfLGDyVDRG~~s~--ev-l~lL~~lk~~~P~~v~lLRGNHE 172 (416)
+++++||+|-... .+ ..+.+.......+.+|++||++|.|.... +. ...+..+. ..+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 4789999995322 22 23333333345688999999999998432 22 22232332 12234889999999
Q ss_pred c
Q psy16023 173 C 173 (416)
Q Consensus 173 ~ 173 (416)
.
T Consensus 81 ~ 81 (214)
T cd07399 81 L 81 (214)
T ss_pred c
Confidence 4
No 67
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.13 E-value=0.00091 Score=69.47 Aligned_cols=73 Identities=15% Similarity=0.176 Sum_probs=56.2
Q ss_pred CCcceecCCccc------------HHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhc-----------
Q psy16023 103 APVTVCGDIHGQ------------FYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLC----------- 159 (416)
Q Consensus 103 ~~i~VvGDIHG~------------~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~----------- 159 (416)
++|++++|+|-- +..|.++++.+-....|-+|+.||+.|++.-|.+++..++.+-..
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 689999999942 557788888776667899999999999999998887554443221
Q ss_pred -------------------------CCCeEEEeCCCccccc
Q psy16023 160 -------------------------HPTTLFLLRGNHECRH 175 (416)
Q Consensus 160 -------------------------~P~~v~lLRGNHE~~~ 175 (416)
..-.|++|-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999974
No 68
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.07 E-value=0.0011 Score=68.94 Aligned_cols=71 Identities=25% Similarity=0.298 Sum_probs=46.7
Q ss_pred CCcceecCCc-cc-H------HH----HHHHHHhcCCCCCceeeeeccCCCCCCChHHHH----HHHHHhhhcCCCeEEE
Q psy16023 103 APVTVCGDIH-GQ-F------YD----LMKLFEVGGPPASTKYLFLGDYVDRGYFSIECV----LYLWALKLCHPTTLFL 166 (416)
Q Consensus 103 ~~i~VvGDIH-G~-~------~d----L~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl----~lL~~lk~~~P~~v~l 166 (416)
|+++.++|+| |. + .+ |..+.+.......+.+|+.||++|++..+.+.. .++..++. .+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 5788999999 32 1 11 334444444456789999999999986554332 23334442 2346999
Q ss_pred eCCCcccc
Q psy16023 167 LRGNHECR 174 (416)
Q Consensus 167 LRGNHE~~ 174 (416)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999975
No 69
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.01 E-value=0.0014 Score=62.79 Aligned_cols=66 Identities=26% Similarity=0.239 Sum_probs=41.2
Q ss_pred cceecCCccc---------HH----HH-HHHHHh--cCCCCCceeeeeccCCCCCCCh--HHHHHHHHHhhhcCCCeEEE
Q psy16023 105 VTVCGDIHGQ---------FY----DL-MKLFEV--GGPPASTKYLFLGDYVDRGYFS--IECVLYLWALKLCHPTTLFL 166 (416)
Q Consensus 105 i~VvGDIHG~---------~~----dL-~~ll~~--~g~~~~~~~vfLGDyVDRG~~s--~evl~lL~~lk~~~P~~v~l 166 (416)
|++++|+|-. +. ++ .++.+. .-.+..|-+|+.||+++++... .+.+.+|.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 21 23 333332 1124678999999999887643 2333433332 335899
Q ss_pred eCCCcccc
Q psy16023 167 LRGNHECR 174 (416)
Q Consensus 167 LRGNHE~~ 174 (416)
+.||||..
T Consensus 77 V~GNHD~~ 84 (232)
T cd07393 77 LKGNHDYW 84 (232)
T ss_pred EeCCcccc
Confidence 99999973
No 70
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.90 E-value=0.0026 Score=61.28 Aligned_cols=73 Identities=21% Similarity=0.185 Sum_probs=50.4
Q ss_pred CCcceecCCccc------HHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhh--cCCCeEEEeCCCcccc
Q psy16023 103 APVTVCGDIHGQ------FYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKL--CHPTTLFLLRGNHECR 174 (416)
Q Consensus 103 ~~i~VvGDIHG~------~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~--~~P~~v~lLRGNHE~~ 174 (416)
++++.|+|+|-. ...+.++++.......|-+|+.||+.+.|. .+-...+..+-. ..|..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468899999977 234555666555556699999999999963 222233333322 5677899999999988
Q ss_pred cch
Q psy16023 175 HLT 177 (416)
Q Consensus 175 ~l~ 177 (416)
...
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 543
No 71
>KOG0376|consensus
Probab=96.90 E-value=0.00034 Score=72.75 Aligned_cols=115 Identities=14% Similarity=0.062 Sum_probs=98.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCcceec----CCcceecCCcccHHHHHHHHHhcCCCCC-ceeeeeccCCCCCCChHHH
Q psy16023 75 RIDETAALKIINEGATLLRSEKTMIDIE----APVTVCGDIHGQFYDLMKLFEVGGPPAS-TKYLFLGDYVDRGYFSIEC 149 (416)
Q Consensus 75 ~~~~~~~~~l~~~a~~il~~ep~ll~~~----~~i~VvGDIHG~~~dL~~ll~~~g~~~~-~~~vfLGDyVDRG~~s~ev 149 (416)
.+...+...+++.+.+++..+||...+. .-.+.++|.||+..|+.++++.. |.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 3566778889999999999999887763 23788999999999999999864 444 3599999999999999999
Q ss_pred HHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhh
Q psy16023 150 VLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYS 191 (416)
Q Consensus 150 l~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~ 191 (416)
+..|...+...|+...+.|++||+..+...++|..+....++
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~ 133 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEG 133 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCcc
Confidence 999999999999999999999999988888888776666653
No 72
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=96.86 E-value=0.0024 Score=59.53 Aligned_cols=69 Identities=22% Similarity=0.169 Sum_probs=39.4
Q ss_pred ceecCCccc---HH---HHHHHHHhcCCCCCceeeeeccCCCCC--C-----C-hHHHHHHHHHhhhcCCCeEEEeCCCc
Q psy16023 106 TVCGDIHGQ---FY---DLMKLFEVGGPPASTKYLFLGDYVDRG--Y-----F-SIECVLYLWALKLCHPTTLFLLRGNH 171 (416)
Q Consensus 106 ~VvGDIHG~---~~---dL~~ll~~~g~~~~~~~vfLGDyVDRG--~-----~-s~evl~lL~~lk~~~P~~v~lLRGNH 171 (416)
++|+|+|-. .. .+..+++.......+.+|++||++|.- . . ..+.+..++.+. .....++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 479999922 11 122222221124568999999999842 1 1 122223333332 2345799999999
Q ss_pred cccc
Q psy16023 172 ECRH 175 (416)
Q Consensus 172 E~~~ 175 (416)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9753
No 73
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=96.76 E-value=0.0033 Score=60.77 Aligned_cols=71 Identities=18% Similarity=0.042 Sum_probs=43.1
Q ss_pred CcceecCCcccH----------------HHHHHHHHhcC--CCCCceeeeeccCCCCCCChH---HHHHHHHH-hhhc-C
Q psy16023 104 PVTVCGDIHGQF----------------YDLMKLFEVGG--PPASTKYLFLGDYVDRGYFSI---ECVLYLWA-LKLC-H 160 (416)
Q Consensus 104 ~i~VvGDIHG~~----------------~dL~~ll~~~g--~~~~~~~vfLGDyVDRG~~s~---evl~lL~~-lk~~-~ 160 (416)
++++++|+|-.. ..|.++++... .+..+.+|++||+++.|...- +....+.+ ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 467888888663 12445555332 235678999999999887541 11222222 2211 1
Q ss_pred CCeEEEeCCCcccc
Q psy16023 161 PTTLFLLRGNHECR 174 (416)
Q Consensus 161 P~~v~lLRGNHE~~ 174 (416)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999975
No 74
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.74 E-value=0.003 Score=61.43 Aligned_cols=71 Identities=18% Similarity=0.084 Sum_probs=42.3
Q ss_pred cceecCCcccHH------HH-HHHHHhcCCCCCceeeeeccCCCCCCCh--------H---HHHHHHHHhhhcCCCeEEE
Q psy16023 105 VTVCGDIHGQFY------DL-MKLFEVGGPPASTKYLFLGDYVDRGYFS--------I---ECVLYLWALKLCHPTTLFL 166 (416)
Q Consensus 105 i~VvGDIHG~~~------dL-~~ll~~~g~~~~~~~vfLGDyVDRG~~s--------~---evl~lL~~lk~~~P~~v~l 166 (416)
++.++|||-... .. ..+++.......+.+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 467899996321 12 2234433334567999999999986521 1 2222222222223567999
Q ss_pred eCCCccccc
Q psy16023 167 LRGNHECRH 175 (416)
Q Consensus 167 LRGNHE~~~ 175 (416)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999853
No 75
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.74 E-value=0.0025 Score=62.48 Aligned_cols=70 Identities=20% Similarity=0.139 Sum_probs=43.1
Q ss_pred CCcceecCCcc----cHHHHHHHHHhcCCCCCceeeeeccCCCCC-CCh----HHHHHHHHHhhhcCCCeEEEeCCCccc
Q psy16023 103 APVTVCGDIHG----QFYDLMKLFEVGGPPASTKYLFLGDYVDRG-YFS----IECVLYLWALKLCHPTTLFLLRGNHEC 173 (416)
Q Consensus 103 ~~i~VvGDIHG----~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG-~~s----~evl~lL~~lk~~~P~~v~lLRGNHE~ 173 (416)
-+++|+||.|. ....+.++.+. ....+.+|++||+++.+ ..+ -+.+..+..+.... .++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcCccccc
Confidence 36899999995 23334444443 34567899999999544 321 12233333333334 48899999998
Q ss_pred ccc
Q psy16023 174 RHL 176 (416)
Q Consensus 174 ~~l 176 (416)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 76
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.57 E-value=0.0039 Score=59.94 Aligned_cols=67 Identities=21% Similarity=0.290 Sum_probs=39.6
Q ss_pred ceecCCc--ccH---HHHHHHHH-hcCC----CCCceeeeeccCCCCCC-----C-------h----HHHHHHHHHhhhc
Q psy16023 106 TVCGDIH--GQF---YDLMKLFE-VGGP----PASTKYLFLGDYVDRGY-----F-------S----IECVLYLWALKLC 159 (416)
Q Consensus 106 ~VvGDIH--G~~---~dL~~ll~-~~g~----~~~~~~vfLGDyVDRG~-----~-------s----~evl~lL~~lk~~ 159 (416)
++++|+| +.. ..+..+++ ..+. ...+.+|++||++|+.. . . .++..+|.++..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 5799999 432 22233333 1222 13489999999999731 0 0 123334444432
Q ss_pred CCCeEEEeCCCcccc
Q psy16023 160 HPTTLFLLRGNHECR 174 (416)
Q Consensus 160 ~P~~v~lLRGNHE~~ 174 (416)
.-.|+++.||||..
T Consensus 81 -~~~v~~ipGNHD~~ 94 (243)
T cd07386 81 -HIKIIIIPGNHDAV 94 (243)
T ss_pred -CCeEEEeCCCCCcc
Confidence 34799999999975
No 77
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.53 E-value=0.0064 Score=54.76 Aligned_cols=66 Identities=23% Similarity=0.342 Sum_probs=48.5
Q ss_pred ceecCCcccHHHHHHHHHh--cCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcc
Q psy16023 106 TVCGDIHGQFYDLMKLFEV--GGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHE 172 (416)
Q Consensus 106 ~VvGDIHG~~~dL~~ll~~--~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE 172 (416)
.||||+||+++.+.+-++. ....+-+-+|++||+..-...+-+.-.++ .=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~-~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYK-DGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHh-cCCccCCCCEEEECCCCC
Confidence 4899999999998876653 12235688999999997666554444443 444567778999999998
No 78
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.47 E-value=0.0051 Score=56.30 Aligned_cols=49 Identities=24% Similarity=0.337 Sum_probs=31.4
Q ss_pred CCCCceeeeeccCCCCCCCh--HH---HHHHHHHhhhcC-----CCeEEEeCCCccccc
Q psy16023 127 PPASTKYLFLGDYVDRGYFS--IE---CVLYLWALKLCH-----PTTLFLLRGNHECRH 175 (416)
Q Consensus 127 ~~~~~~~vfLGDyVDRG~~s--~e---vl~lL~~lk~~~-----P~~v~lLRGNHE~~~ 175 (416)
.-..+.+|++||++|.+... .+ .+..+..+.... .-.++++.||||...
T Consensus 43 ~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 43 RLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred hcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34568999999999988743 22 222222221111 346999999999763
No 79
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.36 E-value=0.013 Score=54.94 Aligned_cols=47 Identities=23% Similarity=0.366 Sum_probs=35.0
Q ss_pred CCCceeeeeccCCCCCCCh--HHHHHHHHHhhhcCC----CeEEEeCCCcccc
Q psy16023 128 PASTKYLFLGDYVDRGYFS--IECVLYLWALKLCHP----TTLFLLRGNHECR 174 (416)
Q Consensus 128 ~~~~~~vfLGDyVDRG~~s--~evl~lL~~lk~~~P----~~v~lLRGNHE~~ 174 (416)
-..+-+|||||++|.|+.+ .|....+..++..++ ..++.|.||||--
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 3568999999999999854 346666666654432 3678999999964
No 80
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.22 E-value=0.025 Score=51.13 Aligned_cols=44 Identities=23% Similarity=0.172 Sum_probs=31.3
Q ss_pred CCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCccccc
Q psy16023 128 PASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 128 ~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
.++|.+.+|||+.-.-....+..+.+-+ -|++.++++||||--.
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~GNhDk~~ 87 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVPGNHDKCH 87 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHH----cCCcEEEeeCCCCCCc
Confidence 4678999999998655544444443333 3678999999999753
No 81
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.18 E-value=0.018 Score=55.31 Aligned_cols=98 Identities=21% Similarity=0.311 Sum_probs=59.4
Q ss_pred eecCCccc------HHHHHHHHHhcCCCCCceeeeeccCCC--CCCC-----hHHHHHHHHHhhhcCCCeEEEeCCCccc
Q psy16023 107 VCGDIHGQ------FYDLMKLFEVGGPPASTKYLFLGDYVD--RGYF-----SIECVLYLWALKLCHPTTLFLLRGNHEC 173 (416)
Q Consensus 107 VvGDIHG~------~~dL~~ll~~~g~~~~~~~vfLGDyVD--RG~~-----s~evl~lL~~lk~~~P~~v~lLRGNHE~ 173 (416)
.|+|+|=. .+.|.+.|+.. .+..+.+++|||++| .|.+ --+|...|..+. ....+++++.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~-a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREE-AAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhc-cccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchHH
Confidence 57898855 33445556543 236789999999987 2322 245666665554 355689999999994
Q ss_pred ccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEEE---eCcEEEEeCCC
Q psy16023 174 RHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALM---NQQFLCVHGGL 222 (416)
Q Consensus 174 ~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi 222 (416)
. +...++ . -.--+.-+|-..++ +.+++++||-.
T Consensus 80 l-l~~~f~--~-------------~~g~~~l~~~~~~~~l~g~~~Ll~HGD~ 115 (237)
T COG2908 80 L-LGKRFA--Q-------------EAGGMTLLPDPIVLDLYGKRILLAHGDT 115 (237)
T ss_pred H-HHHHHH--h-------------hcCceEEcCcceeeeecCcEEEEEeCCc
Confidence 4 322211 0 01112344555433 56899999965
No 82
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=96.04 E-value=0.014 Score=55.77 Aligned_cols=74 Identities=22% Similarity=0.228 Sum_probs=55.2
Q ss_pred cCCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCC--CCCCChHHHHH-HHHHhhhcCCCeEEEeCCCcccccc
Q psy16023 102 EAPVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYV--DRGYFSIECVL-YLWALKLCHPTTLFLLRGNHECRHL 176 (416)
Q Consensus 102 ~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyV--DRG~~s~evl~-lL~~lk~~~P~~v~lLRGNHE~~~l 176 (416)
.|++..+.|+||.++.+.+++..+..-..+-+++.||+. +.|+.-.-.-+ .+..++. .-..++.++||.|...+
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~~~v 79 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDPPEV 79 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCChHHH
Confidence 478999999999999999999988777789999999999 88764322211 0233332 23479999999887643
No 83
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.00 E-value=0.014 Score=60.09 Aligned_cols=73 Identities=16% Similarity=0.141 Sum_probs=52.3
Q ss_pred CCcceecCCccc-------------HHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHHHHhhhcC---CCeEEE
Q psy16023 103 APVTVCGDIHGQ-------------FYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYLWALKLCH---PTTLFL 166 (416)
Q Consensus 103 ~~i~VvGDIHG~-------------~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~---P~~v~l 166 (416)
|+++.++|.|=- +.+|..+++.+-....|-+|.-||+.|++.-|.+++..+...-... .-.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578889999944 3455556665555556899999999999988877766555432221 126999
Q ss_pred eCCCccccc
Q psy16023 167 LRGNHECRH 175 (416)
Q Consensus 167 LRGNHE~~~ 175 (416)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999874
No 84
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.88 E-value=0.018 Score=53.95 Aligned_cols=65 Identities=20% Similarity=0.193 Sum_probs=42.2
Q ss_pred CCcccHHHHHHHHH-hcCCCCCceeeeeccCCCCCCChH-HHHHHHHHhhhcC---------------------CCeEEE
Q psy16023 110 DIHGQFYDLMKLFE-VGGPPASTKYLFLGDYVDRGYFSI-ECVLYLWALKLCH---------------------PTTLFL 166 (416)
Q Consensus 110 DIHG~~~dL~~ll~-~~g~~~~~~~vfLGDyVDRG~~s~-evl~lL~~lk~~~---------------------P~~v~l 166 (416)
|++|+=.-|.++++ ....-..+.++||||++|.|--+- |--.....+...+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 55677666777776 333445689999999999885332 2233344443332 135789
Q ss_pred eCCCcccc
Q psy16023 167 LRGNHECR 174 (416)
Q Consensus 167 LRGNHE~~ 174 (416)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999974
No 85
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.84 E-value=0.023 Score=54.73 Aligned_cols=103 Identities=19% Similarity=0.217 Sum_probs=61.1
Q ss_pred cCCcceecCCcccHHH----------------HHHHHH-hcCCCCCceeeeeccCCCCCCC-----hHHHHHHHHHhhhc
Q psy16023 102 EAPVTVCGDIHGQFYD----------------LMKLFE-VGGPPASTKYLFLGDYVDRGYF-----SIECVLYLWALKLC 159 (416)
Q Consensus 102 ~~~i~VvGDIHG~~~d----------------L~~ll~-~~g~~~~~~~vfLGDyVDRG~~-----s~evl~lL~~lk~~ 159 (416)
..++.|+.|+|=-+.. +.+.++ ....-+.+++|.+||+-.-.+. ..|+-.++-.+..
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~- 97 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE- 97 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc-
Confidence 4679999999965432 223332 2223356799999999764433 2444444444433
Q ss_pred CCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCceEEEeCcEEEEeCCCCCCCC
Q psy16023 160 HPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIH 227 (416)
Q Consensus 160 ~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGisp~~~ 227 (416)
. .+++++||||...-....++.- ..++.. ..++++++||=-.|+..
T Consensus 98 ~--evi~i~GNHD~~i~~~~~~~~v------------------~v~~~~--~i~~~~~~HGh~~~~~~ 143 (235)
T COG1407 98 R--EVIIIRGNHDNGIEEILPGFNV------------------EVVDEL--EIGGLLFRHGHKEPEPE 143 (235)
T ss_pred C--cEEEEeccCCCccccccccCCc------------------eeeeeE--EecCEEEEeCCCCCccc
Confidence 2 4999999999864333333211 122222 25789999987765543
No 86
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=95.77 E-value=0.015 Score=57.66 Aligned_cols=71 Identities=23% Similarity=0.258 Sum_probs=48.5
Q ss_pred CCcceecCCcccHHH--HHHHHHhcCCCCCceeeeeccCCCC-CC-ChHHHHHHHHHhhhcCCCeEEEeCCCccccc
Q psy16023 103 APVTVCGDIHGQFYD--LMKLFEVGGPPASTKYLFLGDYVDR-GY-FSIECVLYLWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 103 ~~i~VvGDIHG~~~d--L~~ll~~~g~~~~~~~vfLGDyVDR-G~-~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
-+|+-++|+|-.... ..+.+........|-+++.|||+|+ .+ ....++..|..|+..+ .++++.||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEeccccccc
Confidence 358889999988655 2233332222333899999999995 44 4455666666666544 7999999998763
No 87
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=95.54 E-value=0.013 Score=56.19 Aligned_cols=72 Identities=19% Similarity=0.247 Sum_probs=44.9
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChH-------------------------HHHHHHHHhh
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSI-------------------------ECVLYLWALK 157 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~-------------------------evl~lL~~lk 157 (416)
.+|..++|.||+++.|.++.+.....+.|-++|+||++-....+. |.+.-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 468899999999999999998666667799999999986554333 2333334433
Q ss_pred hcCCCeEEEeCCCcccc
Q psy16023 158 LCHPTTLFLLRGNHECR 174 (416)
Q Consensus 158 ~~~P~~v~lLRGNHE~~ 174 (416)
...+-.+++|+||||..
T Consensus 86 ~~~~~p~~~vPG~~Dap 102 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAP 102 (255)
T ss_dssp HCC-SEEEEE--TTS-S
T ss_pred HhcCCcEEEecCCCCch
Confidence 44555899999999986
No 88
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.50 E-value=0.02 Score=54.83 Aligned_cols=66 Identities=27% Similarity=0.270 Sum_probs=42.2
Q ss_pred CcceecCCcccH---------HHHHHHHHhcC-CCCCceeeeeccCCCCCCChH-----HHHHHHHHhhhcCCCeEEEeC
Q psy16023 104 PVTVCGDIHGQF---------YDLMKLFEVGG-PPASTKYLFLGDYVDRGYFSI-----ECVLYLWALKLCHPTTLFLLR 168 (416)
Q Consensus 104 ~i~VvGDIHG~~---------~dL~~ll~~~g-~~~~~~~vfLGDyVDRG~~s~-----evl~lL~~lk~~~P~~v~lLR 168 (416)
+|+.++|+||.+ ..+..+++... ..++.-++..||+++.++.+- .++..|-++. . . ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g---~-d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG---Y-D-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC---C-C-EEee
Confidence 478899999887 44555655322 234446788999999887653 4555554442 2 3 3455
Q ss_pred CCcccc
Q psy16023 169 GNHECR 174 (416)
Q Consensus 169 GNHE~~ 174 (416)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 89
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=95.42 E-value=0.022 Score=47.38 Aligned_cols=38 Identities=16% Similarity=0.357 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhCCCccee
Q psy16023 64 DVLKQHFILEGRIDETAALKIINEGATLLRSEKTMIDI 101 (416)
Q Consensus 64 ~~l~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~ll~~ 101 (416)
..|.++|..++.|+...+..|+.+|.++|+++|+|++|
T Consensus 58 ~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 58 KAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 45778999999999999999999999999999999875
No 90
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=95.09 E-value=0.13 Score=50.22 Aligned_cols=45 Identities=24% Similarity=0.211 Sum_probs=27.8
Q ss_pred CCceeeeeccCCCCCCChH--H---HHHHHHHhhhcCC--CeEEEeCCCccc
Q psy16023 129 ASTKYLFLGDYVDRGYFSI--E---CVLYLWALKLCHP--TTLFLLRGNHEC 173 (416)
Q Consensus 129 ~~~~~vfLGDyVDRG~~s~--e---vl~lL~~lk~~~P--~~v~lLRGNHE~ 173 (416)
..+.+||+||++|.|.... + -+..+..+-...+ ..++.|.||||.
T Consensus 45 ~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDi 96 (257)
T cd08163 45 KPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDI 96 (257)
T ss_pred CCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCccc
Confidence 5689999999999997531 1 1111111110111 258999999996
No 91
>PLN02533 probable purple acid phosphatase
Probab=94.92 E-value=0.028 Score=58.87 Aligned_cols=70 Identities=17% Similarity=0.199 Sum_probs=40.8
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChH--H-HHHHHHHhhhcCCCeEEEeCCCccccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSI--E-CVLYLWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~--e-vl~lL~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
-+++|+||+|-. .....+++.......+-+|++||+++-+.+.. + ...++..+....| ++.+.||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 458999999632 11122333222335678999999997654321 1 2223333333344 789999999863
No 92
>KOG2863|consensus
Probab=94.47 E-value=0.089 Score=53.38 Aligned_cols=72 Identities=26% Similarity=0.399 Sum_probs=48.7
Q ss_pred CCcceecCCcccHHHHHH---HHHhcCCCCCceeeeeccCCC-CCC---ChHHH---------HHHHHHhhhcCCCeEEE
Q psy16023 103 APVTVCGDIHGQFYDLMK---LFEVGGPPASTKYLFLGDYVD-RGY---FSIEC---------VLYLWALKLCHPTTLFL 166 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~---ll~~~g~~~~~~~vfLGDyVD-RG~---~s~ev---------l~lL~~lk~~~P~~v~l 166 (416)
|+|.|-|=-||+++.+-+ +.+..|..+.|-++++||+-. |.. +++.| +.--+.=.+..|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999988874 445666667899999999842 211 22222 22222223446666789
Q ss_pred eCCCcccc
Q psy16023 167 LRGNHECR 174 (416)
Q Consensus 167 LRGNHE~~ 174 (416)
|-||||++
T Consensus 81 IGGNHEAs 88 (456)
T KOG2863|consen 81 IGGNHEAS 88 (456)
T ss_pred ecCchHHH
Confidence 99999987
No 93
>PF10500 SR-25: Nuclear RNA-splicing-associated protein; InterPro: IPR019532 SR-25, otherwise known as ADP-ribosylation factor-like factor 6-interacting protein 4, is expressed in virtually all tissue types. At the N terminus there is a repeat of serine-arginine (SR repeat), and towards the middle of the protein there are clusters of both serines and of basic amino acids. The presence of many nuclear localisation signals strongly implies that this is a nuclear protein that may contribute to RNA splicing []. SR-25 is also implicated, along with heat-shock-protein-27, as a mediator in the Rac1 (GTPase ras-related C3 botulinum toxin substrate 1; also see IPR019093 from INTERPRO) signalling pathway [].
Probab=93.84 E-value=0.044 Score=51.98 Aligned_cols=10 Identities=0% Similarity=-0.060 Sum_probs=4.7
Q ss_pred HhcCCCCHHH
Q psy16023 71 ILEGRIDETA 80 (416)
Q Consensus 71 ~~~~~~~~~~ 80 (416)
..-.+++.++
T Consensus 155 ~am~PmTkEE 164 (225)
T PF10500_consen 155 QAMAPMTKEE 164 (225)
T ss_pred hhcCCCCHHH
Confidence 3344555543
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=93.81 E-value=0.1 Score=50.65 Aligned_cols=70 Identities=23% Similarity=0.248 Sum_probs=40.2
Q ss_pred CcceecCCccc--H--HHHHHHHH-hcCCCCCceeeeeccCC-CCCCCh------HHHHHHHHHhhhcCCCeEEEeCCCc
Q psy16023 104 PVTVCGDIHGQ--F--YDLMKLFE-VGGPPASTKYLFLGDYV-DRGYFS------IECVLYLWALKLCHPTTLFLLRGNH 171 (416)
Q Consensus 104 ~i~VvGDIHG~--~--~dL~~ll~-~~g~~~~~~~vfLGDyV-DRG~~s------~evl~lL~~lk~~~P~~v~lLRGNH 171 (416)
+++++||.=.. . .++...+. .......+.+|++||+| +-|..+ .+.+..++... ...-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~-~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAP-SLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccch-hhcCCeEEecCCc
Confidence 47889997553 1 33443333 33334568899999997 555322 12233232211 1223589999999
Q ss_pred ccc
Q psy16023 172 ECR 174 (416)
Q Consensus 172 E~~ 174 (416)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 976
No 95
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=93.68 E-value=0.069 Score=52.22 Aligned_cols=66 Identities=20% Similarity=0.230 Sum_probs=37.6
Q ss_pred CcceecCCcccHH----------------HHHHHHHhcCCCCCceee-eeccCCCCCCCh-----------HHHHHHHHH
Q psy16023 104 PVTVCGDIHGQFY----------------DLMKLFEVGGPPASTKYL-FLGDYVDRGYFS-----------IECVLYLWA 155 (416)
Q Consensus 104 ~i~VvGDIHG~~~----------------dL~~ll~~~g~~~~~~~v-fLGDyVDRG~~s-----------~evl~lL~~ 155 (416)
.|+.++|+||++. .|..+++.......+.++ ..||+++..+.+ ..++..|-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 4678899999962 345555432222223333 379999876522 224555544
Q ss_pred hhhcCCCeEEEeCCCcccc
Q psy16023 156 LKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 156 lk~~~P~~v~lLRGNHE~~ 174 (416)
+. + . ++..||||..
T Consensus 82 ~g---~-d-~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y-D-AGTLGNHEFN 95 (277)
T ss_pred cC---C-C-EEeecccCcc
Confidence 43 2 2 4556999953
No 96
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=92.78 E-value=0.13 Score=50.97 Aligned_cols=66 Identities=21% Similarity=0.307 Sum_probs=41.5
Q ss_pred CcceecCCcccHHH--------------HHHHHHhcC-CCCCceeeeeccCCCCCCC-h-----HHHHHHHHHhhhcCCC
Q psy16023 104 PVTVCGDIHGQFYD--------------LMKLFEVGG-PPASTKYLFLGDYVDRGYF-S-----IECVLYLWALKLCHPT 162 (416)
Q Consensus 104 ~i~VvGDIHG~~~d--------------L~~ll~~~g-~~~~~~~vfLGDyVDRG~~-s-----~evl~lL~~lk~~~P~ 162 (416)
.|+.+.|+||++.. |..+++... ..+..-++..||++...+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 46788999998643 555555322 2344578889999987654 2 245565555543
Q ss_pred eEEEeCCCcccc
Q psy16023 163 TLFLLRGNHECR 174 (416)
Q Consensus 163 ~v~lLRGNHE~~ 174 (416)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 33 555999964
No 97
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=92.67 E-value=0.17 Score=49.06 Aligned_cols=66 Identities=20% Similarity=0.169 Sum_probs=39.8
Q ss_pred CcceecCCcccHH----------HHHHHHHhcCCCCCceeeeeccCCCCCCCh-----HHHHHHHHHhhhcCCCeEEEeC
Q psy16023 104 PVTVCGDIHGQFY----------DLMKLFEVGGPPASTKYLFLGDYVDRGYFS-----IECVLYLWALKLCHPTTLFLLR 168 (416)
Q Consensus 104 ~i~VvGDIHG~~~----------dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~v~lLR 168 (416)
+|+-+.|+||++. .+..+++.....+.+-++..||+++..+.+ ..++..|-++.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 4677899999853 355555532211456788889999876543 233444433321 33 456
Q ss_pred CCcccc
Q psy16023 169 GNHECR 174 (416)
Q Consensus 169 GNHE~~ 174 (416)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999953
No 98
>KOG3662|consensus
Probab=91.96 E-value=0.31 Score=50.61 Aligned_cols=56 Identities=23% Similarity=0.310 Sum_probs=39.1
Q ss_pred HHHHHH-hcCCCCCceeeeeccCCCCCCC--hHHHHHHHHHhhhcCCC----eEEEeCCCccc
Q psy16023 118 LMKLFE-VGGPPASTKYLFLGDYVDRGYF--SIECVLYLWALKLCHPT----TLFLLRGNHEC 173 (416)
Q Consensus 118 L~~ll~-~~g~~~~~~~vfLGDyVDRG~~--s~evl~lL~~lk~~~P~----~v~lLRGNHE~ 173 (416)
|.+.+. ....-+.+-++||||++|-|.. .-|--.....++..|+. .++.+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 344554 2334456889999999998874 34555566666666664 68899999995
No 99
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=90.52 E-value=0.24 Score=53.62 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=37.8
Q ss_pred CCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccch
Q psy16023 129 ASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLT 177 (416)
Q Consensus 129 ~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~ 177 (416)
.-|++-.+||+.||||.+--+++.|+..- +|=+--||||--+|-
T Consensus 184 ~VDhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWMG 227 (640)
T PF06874_consen 184 AVDHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWMG 227 (640)
T ss_pred hhhheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHHH
Confidence 45889999999999999999999998653 677889999987763
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=89.15 E-value=0.54 Score=45.74 Aligned_cols=64 Identities=22% Similarity=0.164 Sum_probs=35.7
Q ss_pred cceecCCcccHHH----------------------HHHHHHhcCCC-CCce-eeeeccCCCCCCCh-----HHHHHHHHH
Q psy16023 105 VTVCGDIHGQFYD----------------------LMKLFEVGGPP-ASTK-YLFLGDYVDRGYFS-----IECVLYLWA 155 (416)
Q Consensus 105 i~VvGDIHG~~~d----------------------L~~ll~~~g~~-~~~~-~vfLGDyVDRG~~s-----~evl~lL~~ 155 (416)
++.+.|+||++.. +..+++..... ..+. ++..||+++..+.+ ..++..+-+
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 5677888887533 33444432111 2333 45689999877644 234444444
Q ss_pred hhhcCCCeEEEeCCCcccc
Q psy16023 156 LKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 156 lk~~~P~~v~lLRGNHE~~ 174 (416)
+. -.+ +. ||||..
T Consensus 83 ~g----~da-~~-GNHefd 95 (264)
T cd07411 83 LG----VDA-MV-GHWEFT 95 (264)
T ss_pred hC----CeE-Ee-cccccc
Confidence 32 133 33 999954
No 101
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=88.85 E-value=2.6 Score=41.40 Aligned_cols=73 Identities=22% Similarity=0.231 Sum_probs=43.6
Q ss_pred CcceecCCccc--HHHHHHHHHhcC--CCCCceeeeeccCCCCCCChH--H------HHHHHHHhhhcCCC-eEEEeCCC
Q psy16023 104 PVTVCGDIHGQ--FYDLMKLFEVGG--PPASTKYLFLGDYVDRGYFSI--E------CVLYLWALKLCHPT-TLFLLRGN 170 (416)
Q Consensus 104 ~i~VvGDIHG~--~~dL~~ll~~~g--~~~~~~~vfLGDyVDRG~~s~--e------vl~lL~~lk~~~P~-~v~lLRGN 170 (416)
+..-.|+-.-+ ...+..+++... .+..+.+|+.||+|+.+.... + .-.+...++..+|. .++.+.||
T Consensus 39 ~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 39 PAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 34556776533 345555565222 246789999999998876431 1 12222234434443 69999999
Q ss_pred cccccc
Q psy16023 171 HECRHL 176 (416)
Q Consensus 171 HE~~~l 176 (416)
||..-.
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998643
No 102
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=87.60 E-value=1 Score=44.35 Aligned_cols=66 Identities=18% Similarity=0.190 Sum_probs=36.8
Q ss_pred CcceecCCcccH---------------------HHHHHHHHhcC-CCCCceeeeeccCCCCCCCh-----HHHHHHHHHh
Q psy16023 104 PVTVCGDIHGQF---------------------YDLMKLFEVGG-PPASTKYLFLGDYVDRGYFS-----IECVLYLWAL 156 (416)
Q Consensus 104 ~i~VvGDIHG~~---------------------~dL~~ll~~~g-~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~l 156 (416)
.|+-++|+||++ ..+..+++... ..+..-++..||+++..+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 356789999875 33444444221 12334456679999876533 3334444333
Q ss_pred hhcCCCeEEEeCCCcccc
Q psy16023 157 KLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 157 k~~~P~~v~lLRGNHE~~ 174 (416)
. . .+ +..||||.-
T Consensus 82 g---~-D~-~~lGNHefd 94 (281)
T cd07409 82 G---Y-DA-MTLGNHEFD 94 (281)
T ss_pred C---C-CE-EEecccccc
Confidence 2 2 33 345999964
No 103
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=86.55 E-value=1.3 Score=43.69 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=47.7
Q ss_pred CCcceecCCccc--HHHHHHHHHhcC-CCCCceeeeeccCCCCC-CChHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 103 APVTVCGDIHGQ--FYDLMKLFEVGG-PPASTKYLFLGDYVDRG-YFSIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 103 ~~i~VvGDIHG~--~~dL~~ll~~~g-~~~~~~~vfLGDyVDRG-~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
|+|.++|||=|. ...|...|.... .-+.|-+|..||....| .-+-+++..|..+-. .++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 679999999999 455555554221 22356788889999766 457888888887765 45555 999874
No 104
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=86.53 E-value=0.3 Score=45.35 Aligned_cols=45 Identities=27% Similarity=0.328 Sum_probs=31.9
Q ss_pred CCCceeeeeccCC--CCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccc
Q psy16023 128 PASTKYLFLGDYV--DRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHL 176 (416)
Q Consensus 128 ~~~~~~vfLGDyV--DRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l 176 (416)
.+.|.++.-||+- =|=+...+=+.+|-+| |..=+++|||||.+.-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~ 88 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWS 88 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccc
Confidence 3567788889974 3445555556666554 7888999999998743
No 105
>KOG1432|consensus
Probab=86.16 E-value=1.5 Score=44.64 Aligned_cols=49 Identities=14% Similarity=0.092 Sum_probs=31.0
Q ss_pred CCCCceeeeeccCCCCCC--ChHHHHHHHHHhhhcCCCeEEEeCCCccccc
Q psy16023 127 PPASTKYLFLGDYVDRGY--FSIECVLYLWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 127 ~~~~~~~vfLGDyVDRG~--~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
....|.+||+||.|+.-. +...++....+=-+.+.--...+.||||...
T Consensus 98 sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 98 SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred ccCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 345689999999999621 2333444333333334335679999999864
No 106
>KOG2476|consensus
Probab=85.99 E-value=1.8 Score=45.40 Aligned_cols=69 Identities=23% Similarity=0.414 Sum_probs=53.4
Q ss_pred cCCcceecCCcccHHHHHHHHHh-cC-CCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCc
Q psy16023 102 EAPVTVCGDIHGQFYDLMKLFEV-GG-PPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNH 171 (416)
Q Consensus 102 ~~~i~VvGDIHG~~~dL~~ll~~-~g-~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNH 171 (416)
+.+|.||||.-|+++.|.+-.+. .. ..+-+-++++|++.+--.++-|++.+....+ ..|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 46899999999999998876652 22 2245889999999998778888888776543 5677788887776
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=84.76 E-value=1 Score=53.15 Aligned_cols=66 Identities=15% Similarity=0.171 Sum_probs=39.5
Q ss_pred CcceecCCcccH---HHHHHHHHhcCCCCCcee-eeeccCCCCCCCh-----HHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 104 PVTVCGDIHGQF---YDLMKLFEVGGPPASTKY-LFLGDYVDRGYFS-----IECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 104 ~i~VvGDIHG~~---~dL~~ll~~~g~~~~~~~-vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
.|+.++|+||++ ..+..+++.......+.+ +..||+++..+.+ ..++..|-++.. -.+..||||.-
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEfd 736 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEFD 736 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEecccccc
Confidence 478899999985 334444442211122344 4479999987654 244555544422 25689999963
No 108
>PF10500 SR-25: Nuclear RNA-splicing-associated protein; InterPro: IPR019532 SR-25, otherwise known as ADP-ribosylation factor-like factor 6-interacting protein 4, is expressed in virtually all tissue types. At the N terminus there is a repeat of serine-arginine (SR repeat), and towards the middle of the protein there are clusters of both serines and of basic amino acids. The presence of many nuclear localisation signals strongly implies that this is a nuclear protein that may contribute to RNA splicing []. SR-25 is also implicated, along with heat-shock-protein-27, as a mediator in the Rac1 (GTPase ras-related C3 botulinum toxin substrate 1; also see IPR019093 from INTERPRO) signalling pathway [].
Probab=84.65 E-value=0.6 Score=44.42 Aligned_cols=14 Identities=7% Similarity=0.014 Sum_probs=5.7
Q ss_pred HHHHHHHHHhcCCC
Q psy16023 115 FYDLMKLFEVGGPP 128 (416)
Q Consensus 115 ~~dL~~ll~~~g~~ 128 (416)
|+....++.....|
T Consensus 165 yearQSvIRrVvDp 178 (225)
T PF10500_consen 165 YEARQSVIRRVVDP 178 (225)
T ss_pred HHHHHhhheeeecC
Confidence 34444444433333
No 109
>KOG0918|consensus
Probab=83.74 E-value=0.088 Score=54.05 Aligned_cols=99 Identities=9% Similarity=-0.123 Sum_probs=72.1
Q ss_pred CCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhh----hhhhHHHHHHHHhh
Q psy16023 128 PASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIK----YSERVYDACMDAFD 203 (416)
Q Consensus 128 ~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~----~~~~~~~~~~~~f~ 203 (416)
+..-..|+|+++++++.+.++.+-+-+.....+-.+.-..++||+... .++.+.... -...+++..++-+.
T Consensus 46 ~d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~ 120 (476)
T KOG0918|consen 46 PDYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRK 120 (476)
T ss_pred CcceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCc
Confidence 344578999999999999999999999888888888899999995542 222221111 11235566677778
Q ss_pred ccCceEEEeCcEEEEeCCCCCCCCCHHHH
Q psy16023 204 CLPLAALMNQQFLCVHGGLSPEIHNLDDI 232 (416)
Q Consensus 204 ~LPlaa~i~~~il~vHgGisp~~~~l~~i 232 (416)
.++...+.+ +++|.||+..|.......+
T Consensus 121 ~~l~k~i~~-~il~~~~l~~Pht~hcla~ 148 (476)
T KOG0918|consen 121 PSLEKTIDP-DILEKTGLACPHTSHCLAS 148 (476)
T ss_pred cceeeeech-hhHhhcCCcCCcccccccC
Confidence 888886545 9999999999987644433
No 110
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=82.59 E-value=1.9 Score=40.14 Aligned_cols=72 Identities=13% Similarity=0.125 Sum_probs=39.1
Q ss_pred cceecCCccc-----HHHHHHHHHhcC-CCCCceeeeeccCCCCCCChH-------------HHHHHHHHhhhc--CCCe
Q psy16023 105 VTVCGDIHGQ-----FYDLMKLFEVGG-PPASTKYLFLGDYVDRGYFSI-------------ECVLYLWALKLC--HPTT 163 (416)
Q Consensus 105 i~VvGDIHG~-----~~dL~~ll~~~g-~~~~~~~vfLGDyVDRG~~s~-------------evl~lL~~lk~~--~P~~ 163 (416)
|++++|+|-. ++.|.++|.... ....+.+|++|+++|.-.... +.+..+.+.-.. ---+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4566776654 566777777555 556678999999999632221 111111111111 1248
Q ss_pred EEEeCCCcccccc
Q psy16023 164 LFLLRGNHECRHL 176 (416)
Q Consensus 164 v~lLRGNHE~~~l 176 (416)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 111
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=79.90 E-value=3 Score=40.44 Aligned_cols=56 Identities=29% Similarity=0.234 Sum_probs=34.3
Q ss_pred ccHHHHHHHHHhcC-CCCCceeeeeccCCCCCCCh-----HHHHHHHHHhhhcCCCeEEEeCCCccc
Q psy16023 113 GQFYDLMKLFEVGG-PPASTKYLFLGDYVDRGYFS-----IECVLYLWALKLCHPTTLFLLRGNHEC 173 (416)
Q Consensus 113 G~~~dL~~ll~~~g-~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~v~lLRGNHE~ 173 (416)
|-+.-+..+++... ..++.-++..||+++.++.+ ..++..|-.+.. -+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEeeccccc
Confidence 34556666666322 23345788889999877532 455565555532 2557899995
No 112
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=78.55 E-value=2.3 Score=42.04 Aligned_cols=66 Identities=20% Similarity=0.090 Sum_probs=36.5
Q ss_pred CcceecCCcccHHH----------HHHHHHhc-----CCCCCceeeeeccCCCCCCCh-----HHHHHHHHHhhhcCCCe
Q psy16023 104 PVTVCGDIHGQFYD----------LMKLFEVG-----GPPASTKYLFLGDYVDRGYFS-----IECVLYLWALKLCHPTT 163 (416)
Q Consensus 104 ~i~VvGDIHG~~~d----------L~~ll~~~-----g~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~ 163 (416)
.|+...|+||++.. +..+++.. ...+..-++-.||.+...+.+ .-++..|-++.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 36778999998533 33444321 113445677889998433322 233444444432 3
Q ss_pred EEEeCCCcccc
Q psy16023 164 LFLLRGNHECR 174 (416)
Q Consensus 164 v~lLRGNHE~~ 174 (416)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999964
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=76.42 E-value=2.8 Score=41.49 Aligned_cols=66 Identities=18% Similarity=0.115 Sum_probs=37.5
Q ss_pred CcceecCCcccHH----------------HHHHHHHh-cC-CCCCceeeeeccCCCCCCCh-------HHHHHHHHHhhh
Q psy16023 104 PVTVCGDIHGQFY----------------DLMKLFEV-GG-PPASTKYLFLGDYVDRGYFS-------IECVLYLWALKL 158 (416)
Q Consensus 104 ~i~VvGDIHG~~~----------------dL~~ll~~-~g-~~~~~~~vfLGDyVDRG~~s-------~evl~lL~~lk~ 158 (416)
.|+-..|+||++. .+.+.++. .. ..+..-++..||+++.-+.+ .-++.++-++..
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mgy 86 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMPY 86 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcCC
Confidence 4778899999863 22222221 11 12234566789998765432 223444444432
Q ss_pred cCCCeEEEeCCCcccc
Q psy16023 159 CHPTTLFLLRGNHECR 174 (416)
Q Consensus 159 ~~P~~v~lLRGNHE~~ 174 (416)
-.+..||||.-
T Consensus 87 -----Da~tlGNHEFd 97 (282)
T cd07407 87 -----DLLTIGNHELY 97 (282)
T ss_pred -----cEEeecccccC
Confidence 35788999974
No 114
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=76.28 E-value=1.9 Score=45.29 Aligned_cols=42 Identities=21% Similarity=0.312 Sum_probs=35.4
Q ss_pred CceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccc
Q psy16023 130 STKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHL 176 (416)
Q Consensus 130 ~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l 176 (416)
.|++-.+||+-||||++--+++.|..+- ++-+--||||--++
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 4788899999999999999999887653 56677899998765
No 115
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=76.00 E-value=5.9 Score=38.74 Aligned_cols=66 Identities=15% Similarity=0.116 Sum_probs=44.3
Q ss_pred CcceecCCcccHH--HHHHHHHhc-CCCCCceeeeeccCCCCC-CChHHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 104 PVTVCGDIHGQFY--DLMKLFEVG-GPPASTKYLFLGDYVDRG-YFSIECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 104 ~i~VvGDIHG~~~--dL~~ll~~~-g~~~~~~~vfLGDyVDRG-~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+|..+|||=|... .+...+... ..-+.+-+|-.||..--| .-+.++...|..+.. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 4789999999953 344444421 112346777789998766 367888888888765 44444 999864
No 116
>KOG3339|consensus
Probab=74.91 E-value=24 Score=33.14 Aligned_cols=85 Identities=14% Similarity=0.184 Sum_probs=63.6
Q ss_pred ceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhh----------------hHhhhhhhhH
Q psy16023 131 TKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQ----------------ECKIKYSERV 194 (416)
Q Consensus 131 ~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~----------------e~~~~~~~~~ 194 (416)
..+|||| .|-+.-|++.+|-+++..|-.+.++ .|+-|.|..+..-.|.. |+...|-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4689998 5888999999999999998766544 89999998765544431 3344444567
Q ss_pred HHHHHHHhhccCceEEEeCcEEEEeC
Q psy16023 195 YDACMDAFDCLPLAALMNQQFLCVHG 220 (416)
Q Consensus 195 ~~~~~~~f~~LPlaa~i~~~il~vHg 220 (416)
|-.+.....++++...+-.+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 77888888888888777677777766
No 117
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=72.52 E-value=5.4 Score=41.52 Aligned_cols=72 Identities=11% Similarity=0.120 Sum_probs=43.0
Q ss_pred CCcceecCCc-ccHHHH--HHHHH-hcCCCCCceeeeeccCCCCCCChH------HHHHHHHHhhh-cCCCeEEEeCCCc
Q psy16023 103 APVTVCGDIH-GQFYDL--MKLFE-VGGPPASTKYLFLGDYVDRGYFSI------ECVLYLWALKL-CHPTTLFLLRGNH 171 (416)
Q Consensus 103 ~~i~VvGDIH-G~~~dL--~~ll~-~~g~~~~~~~vfLGDyVDRG~~s~------evl~lL~~lk~-~~P~~v~lLRGNH 171 (416)
-+++++||-= |.+... .+.+. .+...+.+.+|-+||-.+.|..|+ +..+-++.-.. .-.-.++++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 3689999942 333221 12232 333456688999999988887653 33444443221 0112589999999
Q ss_pred ccc
Q psy16023 172 ECR 174 (416)
Q Consensus 172 E~~ 174 (416)
|.+
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 974
No 118
>KOG1378|consensus
Probab=71.78 E-value=4.6 Score=42.60 Aligned_cols=72 Identities=17% Similarity=0.051 Sum_probs=39.8
Q ss_pred cCCcceecCCcccHHH--HHHHHHhcCCCCCceeeeeccCC--CCCCC--hHHHHHHHHHhhhcCCCeEEEeCCCccccc
Q psy16023 102 EAPVTVCGDIHGQFYD--LMKLFEVGGPPASTKYLFLGDYV--DRGYF--SIECVLYLWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 102 ~~~i~VvGDIHG~~~d--L~~ll~~~g~~~~~~~vfLGDyV--DRG~~--s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
+.++.|+||+==.... .+....... ..+-+|++||+. |.... --+-...+-.+-..-| ..+.-||||.-.
T Consensus 147 ~~~~~i~GDlG~~~~~~s~~~~~~~~~--k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE~d~ 222 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTEPYTSTLRNQEENL--KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHEIDW 222 (452)
T ss_pred ceeEEEEccccccccccchHhHHhccc--CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEecccccccC
Confidence 3458899997333222 222222222 468899999976 33331 1222333333333334 578899999876
Q ss_pred ch
Q psy16023 176 LT 177 (416)
Q Consensus 176 l~ 177 (416)
.+
T Consensus 223 ~~ 224 (452)
T KOG1378|consen 223 PP 224 (452)
T ss_pred CC
Confidence 54
No 119
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=69.15 E-value=7.6 Score=39.02 Aligned_cols=65 Identities=25% Similarity=0.188 Sum_probs=39.2
Q ss_pred cceecCCcccHH------HHHHHHHhc-CC----CCCceeeeeccCCCCCCC-------------hHHHHHHHHHhhhcC
Q psy16023 105 VTVCGDIHGQFY------DLMKLFEVG-GP----PASTKYLFLGDYVDRGYF-------------SIECVLYLWALKLCH 160 (416)
Q Consensus 105 i~VvGDIHG~~~------dL~~ll~~~-g~----~~~~~~vfLGDyVDRG~~-------------s~evl~lL~~lk~~~ 160 (416)
|+-..|+||++. .+..+++.. .. .+..-++..||.+..++. ..-++.+|-++...
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D- 81 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ- 81 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc-
Confidence 566789999963 333333321 11 234567888999875543 33445666565432
Q ss_pred CCeEEEeCCCcccc
Q psy16023 161 PTTLFLLRGNHECR 174 (416)
Q Consensus 161 P~~v~lLRGNHE~~ 174 (416)
.+..||||.-
T Consensus 82 ----a~tlGNHEFD 91 (313)
T cd08162 82 ----AIALGNHEFD 91 (313)
T ss_pred ----EEeccccccc
Confidence 5778999953
No 120
>KOG3325|consensus
Probab=68.68 E-value=17 Score=33.00 Aligned_cols=100 Identities=21% Similarity=0.197 Sum_probs=65.6
Q ss_pred CcceecCCccc--HHHHHHHHHhcCCCCC-ceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhcc
Q psy16023 104 PVTVCGDIHGQ--FYDLMKLFEVGGPPAS-TKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYF 180 (416)
Q Consensus 104 ~i~VvGDIHG~--~~dL~~ll~~~g~~~~-~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~ 180 (416)
-+.|+||+|=- ..+|-.-|+..-.|+. .+++++|++. |.|++.+|..+.. .++++||--|..
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~~----dvhiVrGeFD~~------ 66 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLSS----DVHIVRGEFDEN------ 66 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhCC----CcEEEecccCcc------
Confidence 36789999843 3455444543334554 6799999964 6699999887743 799999987654
Q ss_pred chhhhHhhhhhhhHHHHHHHHhhccCceEEE--e-CcEEEEeCCCCCCCCCHHHHHhhcCCCC
Q psy16023 181 TFKQECKIKYSERVYDACMDAFDCLPLAALM--N-QQFLCVHGGLSPEIHNLDDIRKTDSKSH 240 (416)
Q Consensus 181 gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGisp~~~~l~~i~~i~r~~~ 240 (416)
...|...++ + =++-|+||-.---+.+.+.+.-+.|..+
T Consensus 67 ----------------------~~yP~~kvvtvGqfkIG~chGhqViP~gd~~sL~~LaRqld 107 (183)
T KOG3325|consen 67 ----------------------LKYPENKVVTVGQFKIGLCHGHQVIPWGDPESLALLARQLD 107 (183)
T ss_pred ----------------------ccCCccceEEeccEEEEeecCcEeecCCCHHHHHHHHHhcC
Confidence 112333233 2 2688999987544556777777777544
No 121
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=67.84 E-value=5.3 Score=43.17 Aligned_cols=67 Identities=21% Similarity=0.120 Sum_probs=37.6
Q ss_pred CCcceecCCcccHHH----------HHHHHHhc-----CCCCCceeeeeccCCCCCCCh-----HHHHHHHHHhhhcCCC
Q psy16023 103 APVTVCGDIHGQFYD----------LMKLFEVG-----GPPASTKYLFLGDYVDRGYFS-----IECVLYLWALKLCHPT 162 (416)
Q Consensus 103 ~~i~VvGDIHG~~~d----------L~~ll~~~-----g~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~ 162 (416)
-.|+-+.|+||++.. +..+++.. ...++.-++..||.+...+.+ .-++.++-++..
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~---- 110 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY---- 110 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC----
Confidence 457889999999741 22333311 113345677889998643322 223444444432
Q ss_pred eEEEeCCCcccc
Q psy16023 163 TLFLLRGNHECR 174 (416)
Q Consensus 163 ~v~lLRGNHE~~ 174 (416)
.+ +..||||.-
T Consensus 111 Da-~tlGNHEFD 121 (551)
T PRK09558 111 DA-MAVGNHEFD 121 (551)
T ss_pred CE-EcccccccC
Confidence 34 445999975
No 122
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=66.10 E-value=7.2 Score=41.79 Aligned_cols=69 Identities=23% Similarity=0.264 Sum_probs=43.8
Q ss_pred cCCcceecCCcccHH------------HHHH---HHH-hcCCCCCceeeeeccCCCCCCC------hHHHHHHHHHhhhc
Q psy16023 102 EAPVTVCGDIHGQFY------------DLMK---LFE-VGGPPASTKYLFLGDYVDRGYF------SIECVLYLWALKLC 159 (416)
Q Consensus 102 ~~~i~VvGDIHG~~~------------dL~~---ll~-~~g~~~~~~~vfLGDyVDRG~~------s~evl~lL~~lk~~ 159 (416)
+-.|+-..|+||++. .+.+ +++ .....+..-+|=.||+++..+- ...++.+|-.++-.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~yD 105 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGYD 105 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCCc
Confidence 346788999999998 3333 332 1222234567778999998443 33456666666532
Q ss_pred CCCeEEEeCCCccccc
Q psy16023 160 HPTTLFLLRGNHECRH 175 (416)
Q Consensus 160 ~P~~v~lLRGNHE~~~ 175 (416)
.+-.||||.-.
T Consensus 106 -----a~tiGNHEFd~ 116 (517)
T COG0737 106 -----AMTLGNHEFDY 116 (517)
T ss_pred -----EEeeccccccc
Confidence 57789999853
No 123
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=64.85 E-value=18 Score=38.47 Aligned_cols=73 Identities=27% Similarity=0.357 Sum_probs=41.3
Q ss_pred CcceecCCcc---cH--HHHHHHHHh-cC---CCCCcee-eeeccCCCCC------------CChHHHHHHHHHhhhcCC
Q psy16023 104 PVTVCGDIHG---QF--YDLMKLFEV-GG---PPASTKY-LFLGDYVDRG------------YFSIECVLYLWALKLCHP 161 (416)
Q Consensus 104 ~i~VvGDIHG---~~--~dL~~ll~~-~g---~~~~~~~-vfLGDyVDRG------------~~s~evl~lL~~lk~~~P 161 (416)
.++.++|||= .| +.+...++- .| ..+.-+| +..||.||.. .+..|-.+.+..+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 3788999996 22 233333331 11 2233354 5667999942 122333444444444445
Q ss_pred C--eEEEeCCCcccccc
Q psy16023 162 T--TLFLLRGNHECRHL 176 (416)
Q Consensus 162 ~--~v~lLRGNHE~~~l 176 (416)
. .+++.+||||..-.
T Consensus 307 ~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred CCceEEEecCCCCcccc
Confidence 4 58899999998654
No 124
>KOG3947|consensus
Probab=63.08 E-value=9 Score=37.97 Aligned_cols=63 Identities=24% Similarity=0.377 Sum_probs=42.8
Q ss_pred CCcceecCCcccHHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHH---HHHhhhcCCCeEEEeCCCccccc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLY---LWALKLCHPTTLFLLRGNHECRH 175 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~l---L~~lk~~~P~~v~lLRGNHE~~~ 175 (416)
.+++.++|.|+...+.. ..|..|-++.+||+-.-|- +-||+.+ +-+|.-. .=+.|+||||...
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~---yKIVIaGNHELtF 127 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHE---YKIVIAGNHELTF 127 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhccCcce---eeEEEeeccceee
Confidence 45889999998765544 4577788999999987653 3455433 3333322 3468999999754
No 125
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=62.44 E-value=29 Score=34.04 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=27.7
Q ss_pred ceeeeeccCCCCCCC------------------hHHHHHHHHHhhhcCC--CeEEEeCCCcccccc
Q psy16023 131 TKYLFLGDYVDRGYF------------------SIECVLYLWALKLCHP--TTLFLLRGNHECRHL 176 (416)
Q Consensus 131 ~~~vfLGDyVDRG~~------------------s~evl~lL~~lk~~~P--~~v~lLRGNHE~~~l 176 (416)
.++|..||.|+.-.. ..+-+..+-.+-.+-+ -.|.+++||||-...
T Consensus 44 ~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~ 109 (257)
T cd07387 44 VRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANH 109 (257)
T ss_pred EEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccc
Confidence 479999999996432 2222333322222222 258899999998754
No 126
>KOG2679|consensus
Probab=62.35 E-value=7.7 Score=38.48 Aligned_cols=68 Identities=26% Similarity=0.344 Sum_probs=43.6
Q ss_pred CCcceecC--CcccHHHHHHHHH---hcCCCCCceeeeeccCC-CCCCCh---------HHHHHHHHHhhhcCCCeEEEe
Q psy16023 103 APVTVCGD--IHGQFYDLMKLFE---VGGPPASTKYLFLGDYV-DRGYFS---------IECVLYLWALKLCHPTTLFLL 167 (416)
Q Consensus 103 ~~i~VvGD--IHG~~~dL~~ll~---~~g~~~~~~~vfLGDyV-DRG~~s---------~evl~lL~~lk~~~P~~v~lL 167 (416)
-+++|||| -+|.|..-+-.+. ++..-.-+.+|-+||-+ |-|..+ .|-+-.--+|+. ..+.+
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk----pWy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK----PWYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc----chhhh
Confidence 36899999 6888876555444 33344568899999855 666544 222222222322 57899
Q ss_pred CCCcccc
Q psy16023 168 RGNHECR 174 (416)
Q Consensus 168 RGNHE~~ 174 (416)
.||||.+
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
Confidence 9999976
No 127
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=61.47 E-value=8.2 Score=45.67 Aligned_cols=67 Identities=22% Similarity=0.227 Sum_probs=38.1
Q ss_pred CCcceecCCcccHHH----------------HHHHHHhcC-CCCCceeeeeccCCCCCCCh--------------HHHHH
Q psy16023 103 APVTVCGDIHGQFYD----------------LMKLFEVGG-PPASTKYLFLGDYVDRGYFS--------------IECVL 151 (416)
Q Consensus 103 ~~i~VvGDIHG~~~d----------------L~~ll~~~g-~~~~~~~vfLGDyVDRG~~s--------------~evl~ 151 (416)
-+|+-..|+||++.. +..+++... ..+..-+|-.||.+...+.+ .-++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 358889999998632 233444221 12233445589999866521 23344
Q ss_pred HHHHhhhcCCCeEEEeCCCcccc
Q psy16023 152 YLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 152 lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
.+-.+. --....||||.-
T Consensus 122 ~mN~lg-----yDa~~lGNHEFd 139 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEFN 139 (1163)
T ss_pred HHhhcC-----ccEEeecccccc
Confidence 444443 224668999973
No 128
>KOG2422|consensus
Probab=60.77 E-value=2.4 Score=45.82 Aligned_cols=17 Identities=18% Similarity=0.259 Sum_probs=8.7
Q ss_pred HHHHHh-ccceeeecCCc
Q psy16023 318 VTEMLV-NVLNICSDDEL 334 (416)
Q Consensus 318 v~~Fl~-~l~~IIR~He~ 334 (416)
|..||+ .+..+|-+|+.
T Consensus 506 ~ls~l~~~~~~vvts~d~ 523 (665)
T KOG2422|consen 506 VLSFLESAYHEVVTSDDN 523 (665)
T ss_pred HHHHHHHHHHhheeeccc
Confidence 455555 44455555553
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=59.68 E-value=17 Score=39.45 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=26.3
Q ss_pred CCceeeeeccCCCCCCCh-----HHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 129 ASTKYLFLGDYVDRGYFS-----IECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 129 ~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+..-++..||.+...+.+ ..++.++-++.. -.+..||||.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g~-----Da~~lGNHEFd 94 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAALMNAAGF-----DFFTLGNHEFD 94 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHHHHhccCC-----CEEEecccccc
Confidence 345678889998765433 234555545543 36888999974
No 130
>KOG2422|consensus
Probab=59.64 E-value=3.4 Score=44.63 Aligned_cols=7 Identities=0% Similarity=-0.458 Sum_probs=5.1
Q ss_pred eecCCCC
Q psy16023 253 THSSNIN 259 (416)
Q Consensus 253 LWsDP~~ 259 (416)
+|.+|..
T Consensus 500 vWk~P~~ 506 (665)
T KOG2422|consen 500 VWKLPDV 506 (665)
T ss_pred hhcChHH
Confidence 7888854
No 131
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=59.16 E-value=12 Score=41.42 Aligned_cols=69 Identities=16% Similarity=0.177 Sum_probs=42.9
Q ss_pred ecCCcceecCCcccHHH----------------HHHHHHhcC-CCCCceeeeeccCCCCCCChH-------------HHH
Q psy16023 101 IEAPVTVCGDIHGQFYD----------------LMKLFEVGG-PPASTKYLFLGDYVDRGYFSI-------------ECV 150 (416)
Q Consensus 101 ~~~~i~VvGDIHG~~~d----------------L~~ll~~~g-~~~~~~~vfLGDyVDRG~~s~-------------evl 150 (416)
+..+|+-..|+||++.. +..+++... ..+..-+|-.||++...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 34578889999999642 233343211 123456788899998665431 245
Q ss_pred HHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 151 LYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 151 ~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
..+-.+.. -....||||.-
T Consensus 104 ~amN~lgy-----Da~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEFN 122 (649)
T ss_pred HHHHhcCC-----cEEeccchhhh
Confidence 55555542 35788999974
No 132
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=58.13 E-value=34 Score=34.21 Aligned_cols=72 Identities=18% Similarity=0.204 Sum_probs=47.6
Q ss_pred CCcceecCCccc----HHHHHHHHHhc-CC-C---CCceeeeeccCCCCC----CCh----HHHHHHHHH-hhhcCC---
Q psy16023 103 APVTVCGDIHGQ----FYDLMKLFEVG-GP-P---ASTKYLFLGDYVDRG----YFS----IECVLYLWA-LKLCHP--- 161 (416)
Q Consensus 103 ~~i~VvGDIHG~----~~dL~~ll~~~-g~-~---~~~~~vfLGDyVDRG----~~s----~evl~lL~~-lk~~~P--- 161 (416)
..++|+||+|=+ ++.|.++|+.. .. + ...-+||+|+++-+. ..+ .|-++-|.. +...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 458899999965 67788888744 22 2 145799999998663 222 233444444 233455
Q ss_pred --CeEEEeCCCcccc
Q psy16023 162 --TTLFLLRGNHECR 174 (416)
Q Consensus 162 --~~v~lLRGNHE~~ 174 (416)
.++++++|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 5899999999974
No 133
>KOG2310|consensus
Probab=57.91 E-value=20 Score=38.76 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=39.5
Q ss_pred CCcceecCCccc------------HHHHHHHHHhcCCCCCceeeeeccCCCCCCChHHHHHHH
Q psy16023 103 APVTVCGDIHGQ------------FYDLMKLFEVGGPPASTKYLFLGDYVDRGYFSIECVLYL 153 (416)
Q Consensus 103 ~~i~VvGDIHG~------------~~dL~~ll~~~g~~~~~~~vfLGDyVDRG~~s~evl~lL 153 (416)
.+|.|-.|+|=- |..+..+|+++.....|.++.=||+.+-..-|..++-..
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~ 76 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRC 76 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHH
Confidence 578899999843 567889998887777788888899998877776654433
No 134
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=54.26 E-value=17 Score=40.08 Aligned_cols=66 Identities=18% Similarity=0.145 Sum_probs=39.8
Q ss_pred CcceecCCcccHHH----------------HHHHHHhcC-CCCCceeeeeccCCCCCCChH-------------HHHHHH
Q psy16023 104 PVTVCGDIHGQFYD----------------LMKLFEVGG-PPASTKYLFLGDYVDRGYFSI-------------ECVLYL 153 (416)
Q Consensus 104 ~i~VvGDIHG~~~d----------------L~~ll~~~g-~~~~~~~vfLGDyVDRG~~s~-------------evl~lL 153 (416)
+|+-..|+||++.. +..+++... ..+..-+|-.||.+...+.+- -++..+
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 57778999999642 233443211 123456788899998655431 244555
Q ss_pred HHhhhcCCCeEEEeCCCcccc
Q psy16023 154 WALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 154 ~~lk~~~P~~v~lLRGNHE~~ 174 (416)
-.+.. =....||||.-
T Consensus 84 N~lgy-----Da~tlGNHEFd 99 (626)
T TIGR01390 84 NLLKY-----DVGNLGNHEFN 99 (626)
T ss_pred hhcCc-----cEEeccccccc
Confidence 44432 25778999974
No 135
>KOG2812|consensus
Probab=50.76 E-value=7.2 Score=39.72 Aligned_cols=6 Identities=17% Similarity=0.484 Sum_probs=2.4
Q ss_pred HHHHhh
Q psy16023 198 CMDAFD 203 (416)
Q Consensus 198 ~~~~f~ 203 (416)
++.-|.
T Consensus 410 iLs~fr 415 (426)
T KOG2812|consen 410 ILSQFR 415 (426)
T ss_pred HHHHHH
Confidence 334443
No 136
>PF13945 NST1: Salt tolerance down-regulator
Probab=48.89 E-value=7.7 Score=36.37 Aligned_cols=37 Identities=11% Similarity=0.303 Sum_probs=19.7
Q ss_pred CCHHHHHHHHH----HHHHHHhhCCCcceecCCcceecCCcccH
Q psy16023 76 IDETAALKIIN----EGATLLRSEKTMIDIEAPVTVCGDIHGQF 115 (416)
Q Consensus 76 ~~~~~~~~l~~----~a~~il~~ep~ll~~~~~i~VvGDIHG~~ 115 (416)
|++++=..|+. ++.+.|+.+- .-.-.+.|||.=|-.+
T Consensus 114 L~eeERr~LVkIEKe~VLkkmKeqq---~h~C~C~vCgr~~~~i 154 (190)
T PF13945_consen 114 LSEEERRSLVKIEKEAVLKKMKEQQ---KHSCSCSVCGRKRTAI 154 (190)
T ss_pred cCHHHHHHHHHhhHHHHHHHHHHHh---ccCcccHHHhchhhHH
Confidence 55555555543 2333333321 1235689999988554
No 137
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=45.43 E-value=28 Score=39.67 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=40.5
Q ss_pred CCcceecCCcccHHH----------------HHHHHHhc-CCCCCceeeeeccCCCCCCCh--------------HHHHH
Q psy16023 103 APVTVCGDIHGQFYD----------------LMKLFEVG-GPPASTKYLFLGDYVDRGYFS--------------IECVL 151 (416)
Q Consensus 103 ~~i~VvGDIHG~~~d----------------L~~ll~~~-g~~~~~~~vfLGDyVDRG~~s--------------~evl~ 151 (416)
-+|+-..|+||++.. +..+++.. ...+..-+|..||++..-+.+ .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 457889999999642 22233321 112345678889998764432 12556
Q ss_pred HHHHhhhcCCCeEEEeCCCcccc
Q psy16023 152 YLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 152 lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
.|-.|.. -....||||.-
T Consensus 196 amN~LGy-----DA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALGF-----DAGTLGNHEFN 213 (814)
T ss_pred HHhccCC-----CEEEechhhcc
Confidence 5555542 25788999974
No 138
>KOG2775|consensus
Probab=43.13 E-value=28 Score=35.07 Aligned_cols=8 Identities=50% Similarity=0.841 Sum_probs=5.6
Q ss_pred EEEeCCCC
Q psy16023 216 LCVHGGLS 223 (416)
Q Consensus 216 l~vHgGis 223 (416)
+-+|||.+
T Consensus 255 yrIH~gks 262 (397)
T KOG2775|consen 255 YRIHGGKS 262 (397)
T ss_pred eEeecCcc
Confidence 45788876
No 139
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=41.72 E-value=46 Score=32.44 Aligned_cols=88 Identities=23% Similarity=0.320 Sum_probs=46.5
Q ss_pred CceeeeeccCC-CCCC--C-hHHHHHHHHHhhhc-------CCCeEEEeCCCcccccchhccchhhhHh-hhh-hhhHHH
Q psy16023 130 STKYLFLGDYV-DRGY--F-SIECVLYLWALKLC-------HPTTLFLLRGNHECRHLTEYFTFKQECK-IKY-SERVYD 196 (416)
Q Consensus 130 ~~~~vfLGDyV-DRG~--~-s~evl~lL~~lk~~-------~P~~v~lLRGNHE~~~l~~~~gf~~e~~-~~~-~~~~~~ 196 (416)
-+..+||||-- ||-. . .-=++.+|-++... -..+|++|-||||.-. +..|. .... .+. .++.|
T Consensus 85 itpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny~--arlanhkls~gDTY- 160 (318)
T PF13258_consen 85 ITPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNYM--ARLANHKLSAGDTY- 160 (318)
T ss_pred cccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-CchHH--HHHhhCCCCccchh-
Confidence 35678888865 3421 1 12234455444431 2358999999999752 22221 0000 011 12233
Q ss_pred HHHHHhhccCceEEEe-CcEEEEeCCCCC
Q psy16023 197 ACMDAFDCLPLAALMN-QQFLCVHGGLSP 224 (416)
Q Consensus 197 ~~~~~f~~LPlaa~i~-~~il~vHgGisp 224 (416)
..+..+|++..-. .+++..|-||..
T Consensus 161 ---nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 161 ---NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred ---hccccccccccCcchhhhhcccCcee
Confidence 3456778774432 368888988853
No 140
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=38.89 E-value=76 Score=25.19 Aligned_cols=69 Identities=17% Similarity=0.045 Sum_probs=46.1
Q ss_pred CCcceecCCcccHHHHHHHHHhcC--CCCCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCc
Q psy16023 103 APVTVCGDIHGQFYDLMKLFEVGG--PPASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNH 171 (416)
Q Consensus 103 ~~i~VvGDIHG~~~dL~~ll~~~g--~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNH 171 (416)
..+.|+=|---+.+.+..+++... .+....++.+|+.-|+|..+.+....+-.+...+.+.+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 356777886667778877776321 245677899999999888888766666666666666765555543
No 141
>KOG0526|consensus
Probab=33.31 E-value=24 Score=37.93 Aligned_cols=10 Identities=0% Similarity=-0.217 Sum_probs=4.0
Q ss_pred ccchhhhhcc
Q psy16023 46 QKLIIADVFD 55 (416)
Q Consensus 46 ~~l~~~~~~~ 55 (416)
+..+--.+|.
T Consensus 538 ra~sa~m~w~ 547 (615)
T KOG0526|consen 538 RATSAYMLWL 547 (615)
T ss_pred cchhHHHHHH
Confidence 3334344443
No 142
>KOG2775|consensus
Probab=32.06 E-value=20 Score=36.03 Aligned_cols=17 Identities=18% Similarity=0.194 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy16023 78 ETAALKIINEGATLLRS 94 (416)
Q Consensus 78 ~~~~~~l~~~a~~il~~ 94 (416)
+.++.+=+++|+++-++
T Consensus 81 ~~~i~~d~rraAE~HRq 97 (397)
T KOG2775|consen 81 ESDIYQDLRRAAEAHRQ 97 (397)
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 34444445555554443
No 143
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=32.03 E-value=64 Score=36.75 Aligned_cols=68 Identities=16% Similarity=0.143 Sum_probs=40.2
Q ss_pred cCCcceecCCcccHHH----------------HHHHHHhcC-CCCCceeeeeccCCCCCCCh------------------
Q psy16023 102 EAPVTVCGDIHGQFYD----------------LMKLFEVGG-PPASTKYLFLGDYVDRGYFS------------------ 146 (416)
Q Consensus 102 ~~~i~VvGDIHG~~~d----------------L~~ll~~~g-~~~~~~~vfLGDyVDRG~~s------------------ 146 (416)
.-+|+-..|+||++.. +..+++... ..+..-+|..||++-.-+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 3468889999999632 223333211 12345678889988543322
Q ss_pred -HHHHHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 147 -IECVLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 147 -~evl~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
.-++.+|-+|.. =....||||.-
T Consensus 119 ~~p~i~~mN~lgy-----Da~tlGNHEFd 142 (780)
T PRK09418 119 THPLYRLMNLMKY-----DVISLGNHEFN 142 (780)
T ss_pred chHHHHHHhccCC-----CEEeccccccc
Confidence 235555555542 25778999963
No 144
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=29.38 E-value=44 Score=36.81 Aligned_cols=23 Identities=13% Similarity=0.374 Sum_probs=19.6
Q ss_pred cCCcceecCCcccHHHHHHHHHh
Q psy16023 102 EAPVTVCGDIHGQFYDLMKLFEV 124 (416)
Q Consensus 102 ~~~i~VvGDIHG~~~dL~~ll~~ 124 (416)
.+.-..++||||.++++..+|+.
T Consensus 32 KGTEhF~SDlHGEyeAF~HiLrn 54 (640)
T PF06874_consen 32 KGTEHFMSDLHGEYEAFDHILRN 54 (640)
T ss_pred CCceEeeeccccchHHHHHHHHc
Confidence 35678999999999999999973
No 145
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=29.36 E-value=37 Score=30.82 Aligned_cols=29 Identities=21% Similarity=0.414 Sum_probs=13.7
Q ss_pred CCHHHHHHHHHHHHHHHhh---CC-CcceecCC
Q psy16023 76 IDETAALKIINEGATLLRS---EK-TMIDIEAP 104 (416)
Q Consensus 76 ~~~~~~~~l~~~a~~il~~---ep-~ll~~~~~ 104 (416)
+...++-.|=++...||.- +. -+++++.+
T Consensus 109 i~A~~v~~LReeisail~~a~~~DeV~~rLES~ 141 (155)
T PF08496_consen 109 IKASEVESLREEISAILSVATPEDEVLVRLESP 141 (155)
T ss_pred ccHHHHHHHHHHHHHHHHhCCCCCeEEEEEecC
Confidence 3344444555555555542 22 34566554
No 146
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70).
Probab=25.77 E-value=59 Score=35.38 Aligned_cols=15 Identities=27% Similarity=0.257 Sum_probs=7.3
Q ss_pred cCCcccHHHHHHHHH
Q psy16023 109 GDIHGQFYDLMKLFE 123 (416)
Q Consensus 109 GDIHG~~~dL~~ll~ 123 (416)
||......++.+.++
T Consensus 174 ~~~~~Ai~~~~~al~ 188 (615)
T TIGR00990 174 GDWEKVVEDTTAALE 188 (615)
T ss_pred CCHHHHHHHHHHHHH
Confidence 444444445555554
No 147
>PF09692 Arb1: Argonaute siRNA chaperone (ARC) complex subunit Arb1; InterPro: IPR018606 Arb1 is required for histone H3 Lys9 (H3-K9) methylation, heterochromatin, assembly and siRNA generation in fission yeast [].
Probab=24.25 E-value=56 Score=34.13 Aligned_cols=25 Identities=20% Similarity=0.515 Sum_probs=11.3
Q ss_pred hhccCCCCCCChHHH---HHHHHhcCCCCH
Q psy16023 52 DVFDTRTGKPRPDVL---KQHFILEGRIDE 78 (416)
Q Consensus 52 ~~~~~~~~~p~~~~l---~~~~~~~~~~~~ 78 (416)
++|+ ..+|=.+.+ ++.|++.-|+..
T Consensus 37 ~iY~--p~~Pf~~RiE~~IQRyr~rRRl~~ 64 (396)
T PF09692_consen 37 NIYD--PDRPFVERIEECIQRYRARRRLDS 64 (396)
T ss_pred hhcC--CCccHHHHHHHHHHHHHHhcCCCh
Confidence 4665 345543332 334444444443
No 148
>COG3792 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.17 E-value=19 Score=31.34 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=23.0
Q ss_pred ceecCCcc------cHHHHHHHHHhcCCCCCceeeeeccCCCCC
Q psy16023 106 TVCGDIHG------QFYDLMKLFEVGGPPASTKYLFLGDYVDRG 143 (416)
Q Consensus 106 ~VvGDIHG------~~~dL~~ll~~~g~~~~~~~vfLGDyVDRG 143 (416)
.-+||.|| ..+++....+ +-+++||||.|+|
T Consensus 24 ~yi~~~~g~~~~~~d~dsfeE~kn-------df~~ll~~lld~G 60 (122)
T COG3792 24 NYIGDAYGLSSGQRDPDSFEERKN-------DFFFLLGDLLDEG 60 (122)
T ss_pred HHHHHHhCCccccCChhhHHHHHH-------HHHHHHHHHhcCC
Confidence 45678888 6777777665 4578889999886
No 149
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=20.81 E-value=3.6e+02 Score=24.36 Aligned_cols=79 Identities=16% Similarity=0.299 Sum_probs=46.8
Q ss_pred CCceeeeeccCCCCCCChHHHHHHHHHhhhcCCCeEEEeCCCcccccchhccchhhhHhhhhhhhHHHHHHHHhhccCce
Q psy16023 129 ASTKYLFLGDYVDRGYFSIECVLYLWALKLCHPTTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLA 208 (416)
Q Consensus 129 ~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla 208 (416)
....+||+|-.||+|.-+-++..+|-.|+ +.+|++. |- .|+.. ...|...+.+....++.. .
T Consensus 38 ~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF-~T---------~G~~~--~s~~~~~~~~~~~~~~~~---~ 99 (160)
T PF12641_consen 38 EDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF-GT---------AGAGP--DSEYAKKILKNVEALLPK---G 99 (160)
T ss_pred CCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-Ee---------cCCCC--chHHHHHHHHHHHHhhcc---C
Confidence 34579999999999999999999988875 3355432 11 22211 122333333333333332 2
Q ss_pred EEEeCcEEEEeCCCCCCC
Q psy16023 209 ALMNQQFLCVHGGLSPEI 226 (416)
Q Consensus 209 a~i~~~il~vHgGisp~~ 226 (416)
..+-+ -|+|+|-++|.+
T Consensus 100 ~~~lg-~f~CqGk~~~~~ 116 (160)
T PF12641_consen 100 NEILG-TFMCQGKMDPKV 116 (160)
T ss_pred Ceecc-eEEeCCcCCHHH
Confidence 23333 567789998765
No 150
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=20.17 E-value=76 Score=31.31 Aligned_cols=39 Identities=28% Similarity=0.296 Sum_probs=26.0
Q ss_pred eeeeeccCCCCCCChHHH-HHHHHHhhhcCCCeEEEeCCCcccc
Q psy16023 132 KYLFLGDYVDRGYFSIEC-VLYLWALKLCHPTTLFLLRGNHECR 174 (416)
Q Consensus 132 ~~vfLGDyVDRG~~s~ev-l~lL~~lk~~~P~~v~lLRGNHE~~ 174 (416)
+++|+||+|.+ .+.+. -.+|-.++.+++..+.+ .|-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 68999999944 33443 35666788888755444 466665
Done!