BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16032
(243 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 1 MVIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFL 60
+VIP L H++ ++PH F P RFL+ + F G R+C+G LAR+ + L
Sbjct: 382 VVIPNLQGAHLDETVWEQPHEFRPDRFLEPGANPSALAFGCGARVCLGESLARLELFVVL 441
Query: 61 SNLNQI------PISPLSSVRLATYYQVDLTLTPDQIHL 93
+ L Q P+ L S++ Y V+L + P Q+ L
Sbjct: 442 ARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQVRL 480
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 134 QEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRW---FLLVMA-MEQDVQDTLRAEIT 189
Q + P ++ + DLF +T+ + W FLL +++ +Q+ L E+
Sbjct: 266 QRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELG 325
Query: 190 SKSSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGL 236
+S + VT D + L A I E R R +V L P + S +
Sbjct: 326 PGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSI 372
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 16/124 (12%)
Query: 117 LSNLIKQYRVTYE---------SAFLQE---AKSNPEI-YTSKQLYHLLGDLFGASLDTS 163
L L+ ++R+T++ AFL E AK NPE + + L ++ DLF A + T+
Sbjct: 229 LDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTT 288
Query: 164 TILMRWFLLVMAMEQDVQDTLRAEITSKSSGTI--VTLDDITSMSYLAACINETHRYRTI 221
+ + W LL+M + DVQ ++ EI G + + D M Y A I+E R+ I
Sbjct: 289 STTLAWGLLLMILHPDVQRRVQQEI-DDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDI 347
Query: 222 VTLG 225
V LG
Sbjct: 348 VPLG 351
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRFLQDK----LPAQFMPFQVGKRMCMGGELARMIATLFLS 61
L S+ + ++P RF P FL + P F+PF G+R C+G LARM LF +
Sbjct: 377 LSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFT 436
Query: 62 NLNQ 65
+L Q
Sbjct: 437 SLLQ 440
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQY 124
G+R C+G LARM LF ++L++ +
Sbjct: 417 GRRACLGEPLARMELFLFFTSLLQHF 442
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 16/124 (12%)
Query: 117 LSNLIKQYRVTYE---------SAFLQE---AKSNPEI-YTSKQLYHLLGDLFGASLDTS 163
L L+ ++R+T++ AFL E AK NPE + + L ++ DLF A + T+
Sbjct: 229 LDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTT 288
Query: 164 TILMRWFLLVMAMEQDVQDTLRAEITSKSSGTI--VTLDDITSMSYLAACINETHRYRTI 221
+ + W LL+M + DVQ ++ EI G + + D M Y A I+E R+ I
Sbjct: 289 STTLAWGLLLMILHPDVQRRVQQEI-DDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDI 347
Query: 222 VTLG 225
V LG
Sbjct: 348 VPLG 351
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRFLQDK----LPAQFMPFQVGKRMCMGGELARMIATLFLS 61
L S+ + ++P RF P FL + P F+PF G+R C+G LARM LF +
Sbjct: 377 LSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFT 436
Query: 62 NLNQ 65
+L Q
Sbjct: 437 SLLQ 440
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQY 124
G+R C+G LARM LF ++L++ +
Sbjct: 417 GRRACLGEPLARMELFLFFTSLLQHF 442
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIAT 57
+I L S+ + +A P FDPG FL + K FMPF GKRMC+G LARM
Sbjct: 366 IITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELF 425
Query: 58 LFLSNLNQ 65
LFL+++ Q
Sbjct: 426 LFLTSILQ 433
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 22/28 (78%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKRMC+G LARM LFL+++++ +++
Sbjct: 410 GKRMCVGEGLARMELFLFLTSILQNFKL 437
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 1 MVIPFLYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIA 56
+V+P L S+ + + +P +F P FL + K F PF GKR+C G LARM
Sbjct: 367 VVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMEL 426
Query: 57 TLFLSN-LNQIPISPLSSVRLATYYQVDLTLTPDQIHLSGLPDGKRMCM 104
L L L + PL + D+ L+P I +P ++C+
Sbjct: 427 FLLLCAILQHFNLKPLVDPK-------DIDLSPIHIGFGCIPPRYKLCV 468
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 134 QEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-S 192
+E S +YT + + DLF A +T++ +R+ LL++ ++++ L EI
Sbjct: 254 KEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIG 313
Query: 193 SGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
I + D M Y+ A ++E R+ T+V P +
Sbjct: 314 PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEA 351
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 19/145 (13%)
Query: 96 LPDGKRMCMGGELARMIATL--FLSNLIKQYRVT--------YESAFLQE---AKSNPE- 141
LP GK +L R A + FLS LI++ V + A+L E K++P
Sbjct: 212 LPFGKHQ----QLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSS 267
Query: 142 IYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEIT-SKSSGTIVTLD 200
++ + L +G+L A +T+T ++RW +L MA+ ++Q ++ EI + D
Sbjct: 268 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWD 327
Query: 201 DITSMSYLAACINETHRYRTIVTLG 225
D M Y A ++E R+ IV LG
Sbjct: 328 DKCKMPYTEAVLHEVLRFCNIVPLG 352
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDK----LPAQFMPFQVGKRMCMGGELARMIAT 57
VI LYS+H + + ++P F P RFL +PF +G+R C+G LARM
Sbjct: 374 VITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMF 433
Query: 58 LFLSNLNQ 65
LF + L Q
Sbjct: 434 LFFTALLQ 441
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRVTYESAFLQEAK 137
G+R C+G LARM LF + L++++ + + + + K
Sbjct: 418 GRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLK 456
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 19/145 (13%)
Query: 96 LPDGKRMCMGGELARMIATL--FLSNLIKQYRVT--------YESAFLQE---AKSNPE- 141
LP GK +L R A + FLS LI++ V + A+L E K++P
Sbjct: 212 LPFGKHQ----QLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSS 267
Query: 142 IYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEIT-SKSSGTIVTLD 200
++ + L +G+L A +T+T ++RW +L MA+ ++Q ++ EI + D
Sbjct: 268 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWD 327
Query: 201 DITSMSYLAACINETHRYRTIVTLG 225
D M Y A ++E R+ IV LG
Sbjct: 328 DKCKMPYTEAVLHEVLRFCNIVPLG 352
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDK----LPAQFMPFQVGKRMCMGGELARMIAT 57
VI LYS+H + + ++P F P RFL +PF +G+R C+G LARM
Sbjct: 374 VITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMF 433
Query: 58 LFLSNLNQ 65
LF + L Q
Sbjct: 434 LFFTALLQ 441
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRVTYESAFLQEAK 137
G+R C+G LARM LF + L++++ + + + + K
Sbjct: 418 GRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLK 456
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIAT 57
++ L S+ + + P+ FDPG FL K FMPF GKR+C G LARM
Sbjct: 369 IMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGLARMELF 428
Query: 58 LFLSNLNQ 65
LFL+ + Q
Sbjct: 429 LFLTTILQ 436
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 134 QEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-S 192
QE + + + L + DLF A +T++ +R+ LL++ +V ++ EI
Sbjct: 255 QEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIG 314
Query: 193 SGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
+ D + M Y A ++E RY +V G P V
Sbjct: 315 RHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAV 352
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR+C G LARM LFL+ +++ + +
Sbjct: 413 GKRICAGEGLARMELFLFLTTILQNFNL 440
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 20/105 (19%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIAT 57
V P L S + + P+ F+PG FL K FMPF +GKR+C+G +AR
Sbjct: 369 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELF 428
Query: 58 LFLSNLNQ-----IPISPLSSVRLATYYQVDLTLTPDQIHLSGLP 97
LF + + Q P+ P D+ LTP + + +P
Sbjct: 429 LFFTTILQNFSIASPVPP-----------EDIDLTPRESGVGNVP 462
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 133 LQEAKSNPEI-YTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK 191
+++ KS+P + + L + LF A +T++ +R+ L+M V + ++ EI
Sbjct: 253 MEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQV 312
Query: 192 -SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
S LDD M Y A I+E R ++ G P V
Sbjct: 313 IGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTV 352
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIATLFLS 61
L S+ + + P FDP FL + K FMPF GKR+C+G LARM LFL+
Sbjct: 374 LTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLT 433
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 134 QEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-S 192
+E ++ +T + L DL GA +T++ +R+ LL++ +V ++ EI
Sbjct: 256 KEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVG 315
Query: 193 SGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
+ D M Y A ++E RY ++ P V
Sbjct: 316 RNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAV 353
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR+C+G LARM LFL+ +++ + +
Sbjct: 414 GKRICVGEGLARMELFLFLTFILQNFNL 441
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 20/105 (19%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIAT 57
V P L S + + P+ F+PG FL K FMPF +GKR+C+G +AR
Sbjct: 369 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELF 428
Query: 58 LFLSNLNQ-----IPISPLSSVRLATYYQVDLTLTPDQIHLSGLP 97
LF + + Q P+ P D+ LTP + + +P
Sbjct: 429 LFFTTILQNFSIASPVPP-----------EDIDLTPRESGVGNVP 462
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 133 LQEAKSNPEI-YTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK 191
+++ KS+P + + L + LF A +T++ +R+ L+M V + ++ EI
Sbjct: 253 MEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQV 312
Query: 192 -SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
S LDD M Y A I+E R ++ G P V
Sbjct: 313 IGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTV 352
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 116 FLSNLIKQYRVTYESAFL-------------QEAKSNPEIYTS-KQLYHLLGDLFGASLD 161
F+ ++K++ T+E + ++ N + S +++ +++ DLFGA D
Sbjct: 234 FMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFD 293
Query: 162 TSTILMRWFLLVMAMEQDVQDTLRAEI-TSKSSGTIVTLDDITSMSYLAACINETHRYRT 220
T T + W L+ + M VQ ++ E+ T L D + + Y+ A I ET R+ +
Sbjct: 294 TVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSS 353
Query: 221 IVTLGTP 227
V P
Sbjct: 354 FVPFTIP 360
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFLQ-----DK-LPAQFMPFQVGKRMCMGGELARMIATLFL 60
+ I+ + + P F P RFL DK L + + F +GKR C+G +AR LFL
Sbjct: 385 WQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFL 444
Query: 61 SNLNQIPISPLSSVRLATYYQVDLTLTP 88
+ L L V + V + +TP
Sbjct: 445 AIL-------LQRVEFSVPLGVKVDMTP 465
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 20/105 (19%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIAT 57
V P L S + + P+ F+PG FL K FMPF +GKR+C+G +AR
Sbjct: 369 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELF 428
Query: 58 LFLSNLNQ-----IPISPLSSVRLATYYQVDLTLTPDQIHLSGLP 97
LF + + Q P+ P D+ LTP + + +P
Sbjct: 429 LFFTTILQNFSIASPVPP-----------EDIDLTPRESGVGNVP 462
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 133 LQEAKSNPEI-YTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK 191
+++ KS+P + + L + LF A +T++ +R+ L+M V + ++ EI
Sbjct: 253 MEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQV 312
Query: 192 -SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
S LDD M Y A I+E R ++ G P V
Sbjct: 313 IGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTV 352
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 20/105 (19%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIAT 57
V P L S + + P+ F+PG FL K FMPF +GKR+C+G +AR
Sbjct: 369 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELF 428
Query: 58 LFLSNLNQ-----IPISPLSSVRLATYYQVDLTLTPDQIHLSGLP 97
LF + + Q P+ P D+ LTP + + +P
Sbjct: 429 LFFTTILQNFSIASPVPP-----------EDIDLTPRESGVGNVP 462
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 133 LQEAKSNPEI-YTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK 191
+++ KS+P + + L + LF A +T++ +R+ L+M V + ++ EI
Sbjct: 253 MEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQV 312
Query: 192 -SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
S LDD M Y A I+E R ++ G P V
Sbjct: 313 IGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTV 352
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQ----FMPFQVGKRMCMGGELARMIAT 57
V P L S+ + P F+P FL +K + F+PF +GKR C G LARM
Sbjct: 369 VYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELF 428
Query: 58 LFLSNLNQIPISPLSSVRL-ATYYQVDLTLTPDQIHLSGLP 97
LF + + Q + RL ++ D+ ++P + + +P
Sbjct: 429 LFFTTVMQ-------NFRLKSSQSPKDIDVSPKHVGFATIP 462
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 133 LQEAKSNP--EIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS 190
+QE + NP E Y + L G + ST L FLL+M +V+ + EI
Sbjct: 253 MQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMK-HPEVEAKVHEEIDR 311
Query: 191 K-SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGLPD 238
+D M Y+ A I+E R+ ++ + +V + D
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR C G LARM LF + +++ +R+
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQ----FMPFQVGKRMCMGGELARMIAT 57
V P L S+ + P F+P FL +K + F+PF +GKR C G LARM
Sbjct: 369 VYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELF 428
Query: 58 LFLSNLNQIPISPLSSVRL-ATYYQVDLTLTPDQIHLSGLP 97
LF + + Q + RL ++ D+ ++P + + +P
Sbjct: 429 LFFTTVMQ-------NFRLKSSQSPKDIDVSPKHVGFATIP 462
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 133 LQEAKSNP--EIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS 190
+QE + NP E Y + L G + ST L FLL+M +V+ + EI
Sbjct: 253 MQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMK-HPEVEAKVHEEIDR 311
Query: 191 K-SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGLPD 238
+D M Y+ A I+E R+ ++ + +V + D
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR C G LARM LF + +++ +R+
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQ----FMPFQVGKRMCMGGELARMIAT 57
V P L S+ + P F+P FL +K + F+PF +GKR C G LARM
Sbjct: 369 VYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELF 428
Query: 58 LFLSNLNQIPISPLSSVRL-ATYYQVDLTLTPDQIHLSGLP 97
LF + + Q + RL ++ D+ ++P + + +P
Sbjct: 429 LFFTTVMQ-------NFRLKSSQSPKDIDVSPKHVGFATIP 462
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 133 LQEAKSNP--EIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS 190
+QE + NP E Y + L G + ST L FLL+M +V+ + EI
Sbjct: 253 MQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMK-HPEVEAKVHEEIDR 311
Query: 191 K-SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGLPD 238
+D M Y+ A I+E R+ ++ + +V + D
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR C G LARM LF + +++ +R+
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQ----FMPFQVGKRMCMGGELARMIAT 57
V P L S+ + P F+P FL +K + F+PF +GKR C G LARM
Sbjct: 369 VYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELF 428
Query: 58 LFLSNLNQIPISPLSSVRL-ATYYQVDLTLTPDQIHLSGLP 97
LF + + Q + RL ++ D+ ++P + + +P
Sbjct: 429 LFFTTVMQ-------NFRLKSSQSPKDIDVSPKHVGFATIP 462
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 133 LQEAKSNP--EIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS 190
+QE + NP E Y + L F + ST L FLL+M +V+ + EI
Sbjct: 253 MQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMK-HPEVEAKVHEEIDR 311
Query: 191 K-SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGLPD 238
+D M Y+ A I+E R+ ++ +G +V + D
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRD 360
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR C G LARM LF + +++ +R+
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQ----FMPFQVGKRMCMGGELARMIAT 57
V P L S+ + P F+P FL +K + F+PF +GKR C G LARM
Sbjct: 369 VYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELF 428
Query: 58 LFLSNLNQIPISPLSSVRL-ATYYQVDLTLTPDQIHLSGLP 97
LF + + Q + RL ++ D+ ++P + + +P
Sbjct: 429 LFFTTVMQ-------NFRLKSSQSPKDIDVSPKHVGFATIP 462
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 133 LQEAKSNP--EIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS 190
+QE + NP E Y + L G + ST L FLL+M +V+ + EI
Sbjct: 253 MQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMK-HPEVEAKVHEEIDR 311
Query: 191 K-SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGLPD 238
+D M Y+ A I+E R+ ++ + +V + D
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR C G LARM LF + +++ +R+
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 20/105 (19%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFL----QDKLPAQFMPFQVGKRMCMGGELARMIAT 57
V P L S+ + P F+P FL Q K F+PF +GKR C G LARM
Sbjct: 369 VFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCFGEGLARMELF 428
Query: 58 LFLSNLNQ-----IPISPLSSVRLATYYQVDLTLTPDQIHLSGLP 97
LF + + Q P SP D+ ++P + + +P
Sbjct: 429 LFFTTIMQNFRFKSPQSP-----------KDIDVSPKHVGFATIP 462
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 133 LQEAKSNP--EIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS 190
+QE + NP E Y + L F + ST L FLL+M +V+ + EI
Sbjct: 253 MQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMK-HPEVEAKVHEEIDR 311
Query: 191 K-SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGLPD 238
+D M Y A I+E R+ ++ +G +V + D
Sbjct: 312 VIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRD 360
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYR 125
GKR C G LARM LF + +++ +R
Sbjct: 413 GKRYCFGEGLARMELFLFFTTIMQNFR 439
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIATLFLS 61
L S+ + + P FDP FL + K FMPF GKR+C+G LA M LFL+
Sbjct: 372 LTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLT 431
Query: 62 NLNQ 65
++ Q
Sbjct: 432 SILQ 435
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 134 QEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-S 192
+E + P +T + L + DLFGA +T++ +R+ LL++ +V ++ EI
Sbjct: 254 KEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG 313
Query: 193 SGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
+ D + M Y A ++E RY ++ P V
Sbjct: 314 RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAV 351
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR+C+G LA M LFL+++++ + +
Sbjct: 412 GKRICVGEALAGMELFLFLTSILQNFNL 439
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIATLFLS 61
L S+ + + P FDP FL + K FMPF GKR+C+G LA M LFL+
Sbjct: 374 LTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLT 433
Query: 62 NLNQ 65
++ Q
Sbjct: 434 SILQ 437
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 134 QEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-S 192
+E + P +T + L + DLFGA +T++ +R+ LL++ +V ++ EI
Sbjct: 256 KEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG 315
Query: 193 SGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
+ D + M Y A ++E RY ++ P V
Sbjct: 316 RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAV 353
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
GKR+C+G LA M LFL+++++ + +
Sbjct: 414 GKRICVGEALAGMELFLFLTSILQNFNL 441
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIAT 57
V P L S + + P+ F+PG FL K FMPF +GKR+C G +AR
Sbjct: 369 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELF 428
Query: 58 LFLSNLNQ-----IPISPLSSVRLATYYQVDLTLTPDQIHLSGLP 97
LF + + Q P+ P D+ LTP + + +P
Sbjct: 429 LFFTTILQNFSIASPVPP-----------EDIDLTPRESGVGNVP 462
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 133 LQEAKSNPEI-YTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK 191
+++ KS+P + + L + LF A +T++ +R+ L+M V + ++ EI
Sbjct: 253 MEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQV 312
Query: 192 -SSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
S LDD M Y A I+E R ++ G P V
Sbjct: 313 IGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTV 352
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 131 AFLQEAKSNP----EIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRA 186
A + +K P + +++ +L+ D+FGA DT T + W L+ + + ++Q ++
Sbjct: 262 ALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQK 321
Query: 187 EI-TSKSSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTP 227
E+ T L D + YL A I ET R+ + + P
Sbjct: 322 ELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIP 363
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFL-------QDKLPAQFMPFQVGKRMCMGGELARMIATLF 59
+ ++ + E ++P F P RFL L + M F +GKR C+G LA+ LF
Sbjct: 388 WQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLF 447
Query: 60 LSNLNQ 65
L+ L Q
Sbjct: 448 LAILLQ 453
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFL------QDKLPAQFMPFQVGKRMCMGGELARMIATLFL 60
+S++ + P FDP RFL L ++ M F VGKR C+G EL++M LF+
Sbjct: 385 WSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFI 444
Query: 61 SNL 63
S L
Sbjct: 445 SIL 447
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 154 DLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS-KSSGTIVTLDDITSMSYLAACI 212
D+FGAS DT + ++W LL+ DVQ ++AE+ + + D ++ Y+ A +
Sbjct: 286 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFL 345
Query: 213 NETHRYRTIVTLGTP 227
E R+ + V + P
Sbjct: 346 YEAMRFSSFVPVTIP 360
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQ 123
GKR C+G EL++M LF+S L Q
Sbjct: 426 GKRRCIGEELSKMQLFLFISILAHQ 450
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 20/86 (23%)
Query: 10 HMNGEAHQEPHRFDPGRFLQD-----KLPAQFMPFQVGKRMCMGGELARMIATLFLSNLN 64
H + + + +P +FDP RF D P +PF G R C+G E AR+ LF + L
Sbjct: 350 HADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLI 409
Query: 65 QIPISPLSSVRLATYYQVDLTLTPDQ 90
Q Q D TL P Q
Sbjct: 410 Q---------------QFDWTLLPGQ 420
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRVT 127
G R C+G E AR+ LF + LI+Q+ T
Sbjct: 387 GLRECLGKEFARLEMKLFATRLIQQFDWT 415
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 141 EIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSS-GTIVTL 199
E+ + + +GD+FGA ++T+T +++W L + V+ L EI T+
Sbjct: 267 ELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTI 326
Query: 200 DDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGL 236
D + L A I E R R + + P + + S +
Sbjct: 327 SDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI 363
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 14/68 (20%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPA---------QFMPFQVGKRMCMGGELA 52
VI L+++H N + +P +F P RFL PA ++PF G R C+G LA
Sbjct: 374 VIINLWALHHNEKEWHQPDQFMPERFLN---PAGTQLISPSVSYLPFGAGPRSCIGEILA 430
Query: 53 RMIATLFL 60
R LFL
Sbjct: 431 RQ--ELFL 436
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Query: 17 QEPHRFDPGRFLQD----KLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQ-----IP 67
++P F+P FL K F+PF +GKR+C+G +AR LF + + Q P
Sbjct: 384 EKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP 443
Query: 68 ISPLSSVRLATYYQVDLTLTPDQIHLSGLP 97
++P D+ LTP + + +P
Sbjct: 444 VAP-----------EDIDLTPQECGVGKIP 462
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 133 LQEAKSNPEIYTSKQLYHL--LGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS 190
+++ KSN S Q +L L F + TST L FLL++ + R
Sbjct: 253 MEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQV 312
Query: 191 KSSGTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
L D M Y A I E R+ ++ +G P V
Sbjct: 313 IGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIV 352
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 17 QEPHRFDPGRFLQDKL---PAQFMPFQVGKRMCMGGELARM 54
++ H+F P R+LQ + P +PF +GKRMC+G LA +
Sbjct: 398 EDSHKFRPERWLQKEKKINPFAHLPFGIGKRMCIGRRLAEL 438
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 144 TSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-SSGTIVTLDDI 202
+ K+LY + +L A+++T+ + W L ++ Q L E+ S +D+
Sbjct: 280 SKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDL 339
Query: 203 TSMSYLAACINETHRYRTIVTLGT 226
+M YL AC+ E+ R V T
Sbjct: 340 RNMPYLKACLKESMRLTPSVPFTT 363
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 32/156 (20%)
Query: 107 ELARMIATLFLSNLIKQYRVTYESA------FLQEAKSNPEIYTSKQ--LYHLLGD---- 154
+L R+ T + + + V + A F E + ++ + LY LLGD
Sbjct: 210 DLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMS 269
Query: 155 ----------LFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS---KSSGTIVTLDD 201
+ +DT+++ ++W L MA VQD LRAE+ + ++ G + T+
Sbjct: 270 FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQ 329
Query: 202 ITSMSYLAACINETHRYRTI-VTLGTPDQVYLSSGL 236
+ + L A I ET R I VTL Q YL + L
Sbjct: 330 LVPL--LKASIKETLRLHPISVTL----QRYLVNDL 359
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 18 EPHRFDPGRFL-QDKLPAQF--MPFQVGKRMCMGGELARMIATLFLSNL 63
+P FDP R+L +DK F + F G R C+G +A + T+FL N+
Sbjct: 388 DPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINM 436
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 57 TLFLSNLNQIPISPLSSVRLATYYQVDLTLTPDQIHLSGLPDGKRMCMGGELARMIATLF 116
T F N P LS + TY++ G G R C+G +A + T+F
Sbjct: 384 TFFFDPENFDPTRWLSKDKNITYFRN-----------LGFGWGVRQCLGRRIAELEMTIF 432
Query: 117 LSNLIKQYRV 126
L N+++ +RV
Sbjct: 433 LINMLENFRV 442
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 32/156 (20%)
Query: 107 ELARMIATLFLSNLIKQYRVTYESA------FLQEAKSNPEIYTSKQ--LYHLLGD---- 154
+L R+ T + + + V + A F E + ++ + LY LLGD
Sbjct: 213 DLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMS 272
Query: 155 ----------LFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS---KSSGTIVTLDD 201
+ +DT+++ ++W L MA VQD LRAE+ + ++ G + T+
Sbjct: 273 FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQ 332
Query: 202 ITSMSYLAACINETHRYRTI-VTLGTPDQVYLSSGL 236
+ + L A I ET R I VTL Q YL + L
Sbjct: 333 LVPL--LKASIKETLRLHPISVTL----QRYLVNDL 362
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 18 EPHRFDPGRFL-QDKLPAQF--MPFQVGKRMCMGGELARMIATLFLSNL 63
+P FDP R+L +DK F + F G R C+G +A + T+FL N+
Sbjct: 391 DPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINM 439
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 57 TLFLSNLNQIPISPLSSVRLATYYQVDLTLTPDQIHLSGLPDGKRMCMGGELARMIATLF 116
T F N P LS + TY++ G G R C+G +A + T+F
Sbjct: 387 TFFFDPENFDPTRWLSKDKNITYFRN-----------LGFGWGVRQCLGRRIAELEMTIF 435
Query: 117 LSNLIKQYRV 126
L N+++ +RV
Sbjct: 436 LINMLENFRV 445
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 1 MVIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARM 54
MV ++ S + + +AH +P RFDP R + AQ + F G C+G LAR+
Sbjct: 311 MVNTWVLSANRDSDAHDDPDRFDPSR--KSGGAAQ-LSFGHGVHFCLGAPLARL 361
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 1 MVIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARM 54
MV ++ S + + +AH +P RFDP R + AQ + F G C+G LAR+
Sbjct: 331 MVNTWVLSANRDSDAHDDPDRFDPSR--KSGGAAQ-LSFGHGVHFCLGAPLARL 381
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 88/222 (39%), Gaps = 20/222 (9%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQI 66
Y M EAH R+ PG+ + + + +V R + G+ ++ +
Sbjct: 131 YGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQ--------YMDERAER 182
Query: 67 PISPLSSVRLATYYQVDLTLTPDQIHLSGLPDGKRMCMGGELARMIATLFLSNLIKQYRV 126
L++V Y ++ + L P ++ LP +R LA + L + +I + R
Sbjct: 183 LCVALATVFRGMYRRMVVPLGP--LYRLPLPANRRF--NDALADL--HLLVDEIIAERRA 236
Query: 127 TYE------SAFLQEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDV 180
+ + +A L+ N + ++++ + + +T + W L +A +
Sbjct: 237 SGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEH 296
Query: 181 QDTLRAEITSKSSGTIVTLDDITSMSYLAACINETHRYRTIV 222
D +R E+ + + G V +D+ + + I E R R V
Sbjct: 297 ADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAV 338
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFLQDK---LPAQFM-PFQVGKRMC 46
Y+I + +++ + FDP R+L ++ +P M PF GKR C
Sbjct: 367 YAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKC 410
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 11 MNGEAHQEPHRFD-PGRFLQDKLPAQFMPFQVGKRMCMGGELAR 53
+ G A+++P R+D P F ++ P M F G R C+G LAR
Sbjct: 307 LAGAANRDPRRYDRPDDFDIERDPVPSMSFGAGMRYCLGSYLAR 350
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 4 PFLYSIHMNGEAH---QEPHRFDPGRFLQDKLPAQF--MPFQVGKRMCMGGELARMIATL 58
P L+S ++ G ++P F+P RF +F PF +G R C+G + A+M +
Sbjct: 342 PLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKV 401
Query: 59 FLSNLNQ 65
++ L Q
Sbjct: 402 VMAKLLQ 408
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 42/81 (51%)
Query: 144 TSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSSGTIVTLDDIT 203
T + + + ++ A+ DT ++ + + L ++A +V++ + EI + + +DDI
Sbjct: 292 TRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQ 351
Query: 204 SMSYLAACINETHRYRTIVTL 224
+ + I E+ RY+ +V L
Sbjct: 352 KLKVMENFIYESMRYQPVVDL 372
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 14 EAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELAR-MIATLFLSNLNQIPISPLS 72
E +P+ F F ++ F PF G R C G +A M+ + ++ L + + L
Sbjct: 405 EFFPKPNEFTLENFAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQ 464
Query: 73 SVRLATYYQV-DLTLTPDQ 90
+ + ++ DL+L PD+
Sbjct: 465 GQCVESIQKIHDLSLHPDE 483
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFLQDKL----PAQFMPFQVGKRMCMGGELARMIATLFL 60
Y++H + + EP +F P RF + P + PF G R C+G A M L L
Sbjct: 379 YALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAL 436
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 158 ASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-SSGTIVTLDDITSMSYLAACINETH 216
A +T++ ++ + + +A DVQ L+ EI + + T D + M YL +NET
Sbjct: 285 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 344
Query: 217 R 217
R
Sbjct: 345 R 345
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFLQDKL----PAQFMPFQVGKRMCMGGELARMIATLFL 60
Y++H + + EP +F P RF + P + PF G R C+G A M L L
Sbjct: 378 YALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAL 435
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 158 ASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-SSGTIVTLDDITSMSYLAACINETH 216
A +T++ ++ + + +A DVQ L+ EI + + T D + M YL +NET
Sbjct: 284 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 343
Query: 217 R 217
R
Sbjct: 344 R 344
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFLQDKL----PAQFMPFQVGKRMCMGGELARMIATLFL 60
Y++H + + EP +F P RF + P + PF G R C+G A M L L
Sbjct: 377 YALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAL 434
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 158 ASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-SSGTIVTLDDITSMSYLAACINETH 216
A +T++ ++ + + +A DVQ L+ EI + + T D + M YL +NET
Sbjct: 283 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 342
Query: 217 R 217
R
Sbjct: 343 R 343
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 14 EAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
+AH+ P RF DP RF + A + F G C+G LAR+ A + + L
Sbjct: 341 DAHRTPERFPDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRAL 391
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 1 MVIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQ---FMPFQVGKRMCMG 48
+V FLYS+ N P R++P R+L + + +PF G R C+G
Sbjct: 376 LVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 14 EAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
+AH+ P RF DP RF + A + F G C+G LAR+ A + + L
Sbjct: 341 DAHRTPERFPDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRAL 391
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 14 EAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
+AH+ P RF DP RF + A + F G C+G LAR+ A + + L
Sbjct: 341 DAHRTPERFPDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRAL 391
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 23 DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
DP F+ D+ P + F G +C+G LAR+ A + L
Sbjct: 294 DPDSFIPDRTPNPHLSFGSGIHLCLGAPLARLEARIALEEF 334
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 85 TLTPDQI---HLSGLPDGKRMCMGGELARMIATLFLSNLIKQYRV 126
+ PD+ HLS G +C+G LAR+ A + L K++RV
Sbjct: 297 SFIPDRTPNPHLS-FGSGIHLCLGAPLARLEARIALEEFAKKFRV 340
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 19 PHRFDPGRFL-QDKLPAQF--MPFQVGKRMCMGGELARMIATLFLSNLNQIPISPLSSVR 75
P +FDP R+L +DK F + F G R C+G +A + TLFL I I V
Sbjct: 393 PDKFDPTRWLSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFL-----IHILENFKVE 447
Query: 76 LATYYQVD----LTLTPDQ 90
+ VD L LTPD+
Sbjct: 448 MQHIGDVDTIFNLILTPDK 466
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 129 ESAFLQEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEI 188
E L++ K+N + ++ ++T+++ ++W L MA +VQ+ LR E+
Sbjct: 270 EKMLLEDVKAN------------ITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEV 317
Query: 189 TS---KSSGTIVTLDDITSMSYLAACINETHRYRTI-VTL 224
+ ++ G I + + + L A I ET R I VTL
Sbjct: 318 LNARRQAEGDISKMLQMVPL--LKASIKETLRLHPISVTL 355
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 84 LTLTPDQIHLS--GLPDGKRMCMGGELARMIATLFLSNLIKQYRV 126
L+ D IH G G R C+G +A + TLFL ++++ ++V
Sbjct: 402 LSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKV 446
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 10 HMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGG-----ELARMIATLFLS 61
H + EA EP R+DP R +K+ F+ F G C+G ++ ++AT F S
Sbjct: 374 HHDEEAFPEPRRWDPER--DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 428
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 10 HMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGG-----ELARMIATLFLS 61
H + EA EP R+DP R +K+ F+ F G C+G ++ ++AT F S
Sbjct: 361 HHDEEAFPEPRRWDPER--DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 415
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 10 HMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGG-----ELARMIATLFLS 61
H + EA EP R+DP R +K+ F+ F G C+G ++ ++AT F S
Sbjct: 360 HHDEEAFPEPRRWDPER--DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 414
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 10 HMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGG-----ELARMIATLFLS 61
H + EA EP R+DP R +K+ F+ F G C+G ++ ++AT F S
Sbjct: 374 HHDEEAFPEPRRWDPER--DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 428
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 5 FLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL- 63
L + H + P RFDP D+ + + F G C+G LAR+ AT+ L L
Sbjct: 330 LLAAAHRDPTIVGAPDRFDP-----DRAQIRHLGFGKGAHFCLGAPLARLEATVALPALA 384
Query: 64 NQIPISPLSSVRLATYYQVDLTL 86
+ P + LS Y+ +LTL
Sbjct: 385 ARFPEARLSG---EPEYKRNLTL 404
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 10 HMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGG-----ELARMIATLFLS 61
H + EA EP R+DP R +K+ F+ F G C+G ++ ++AT F S
Sbjct: 362 HHDEEAFPEPRRWDPER--DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 416
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 10 HMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGG-----ELARMIATLFLS 61
H + EA EP R+DP R +K+ F+ F G C+G ++ ++AT F S
Sbjct: 361 HHDEEAFPEPRRWDPER--DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 415
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 15 AHQEPHRFD-PGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQ 65
A+++P FD P FL + P + + F G C+G LAR+ ++ L L +
Sbjct: 332 ANRDPAEFDDPDTFLPGRKPNRHITFGHGMHHCLGSALARIELSVVLRVLAE 383
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 12 NGEAHQEPHRFDPGRFLQDK--LPAQFMPFQVGKRMCMGGELARMIATLFL-SNLNQIPI 68
+GEA F P RFL+++ ++ PF +G+R+C+G + A + + L + + +
Sbjct: 306 DGEA------FRPERFLEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
Query: 69 SPLSSVRLATYYQVDLTLTPDQIHLSGLPDGKR 101
PL R+ +TL P+ GLP R
Sbjct: 360 DPLPFPRVL----AQVTLRPE----GGLPARPR 384
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLS 61
VI +L S + + EP F GR + F +G MC+G LAR+ A++ L+
Sbjct: 257 VIVYLGSANRDETFFDEPDLFKIGR------REMHLAFGIGIHMCLGAPLARLEASIALN 310
Query: 62 NL 63
++
Sbjct: 311 DI 312
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 99 GKRMCMGGELARMIATLFLSNLI---KQYRVTYESAFLQEAK 137
G MC+G LAR+ A++ L++++ K+ ++ Y+ + L + K
Sbjct: 291 GIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLDNK 332
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSN-LNQIP 67
A+++P F DP R ++ P + F G C GG LAR+ + L + L+++P
Sbjct: 321 ANRDPEVFPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVP 375
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 12 NGEAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
NG A+++P +F DP RF + + F G CMG LA++ + L L
Sbjct: 316 NGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRAL 368
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSN-LNQIP 67
A+++P F DP R ++ P + F G C GG LAR+ + L + L+++P
Sbjct: 321 ANRDPEVFPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVP 375
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 12 NGEAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
NG A+++P +F DP RF + + F G CMG LA++ + L L
Sbjct: 316 NGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRAL 368
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSN-LNQIP 67
A+++P F DP R ++ P + F G C GG LAR+ + L + L+++P
Sbjct: 321 ANRDPEVFPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVP 375
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 12 NGEAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
NG A+++P +F DP RF + + F G CMG LA++ + L L
Sbjct: 315 NGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRAL 367
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSN-LNQIP 67
A+++P F DP R ++ P + F G C GG LAR+ + L + L+++P
Sbjct: 321 ANRDPEVFPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVP 375
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 12 NGEAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
NG A+++P +F DP RF + + F G CMG LA++ + L L
Sbjct: 315 NGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRAL 367
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 12 NGEAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
NG A+++P +F DP RF + + F G CMG LA++ + L L
Sbjct: 316 NGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRAL 368
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSN-LNQIP 67
A+++P F DP R ++ P + F G C GG LAR+ + L + L+++P
Sbjct: 321 ANRDPEVFPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVP 375
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSN-LNQIP 67
A+++P F DP R ++ P + F G C GG LAR+ + L + L+++P
Sbjct: 321 ANRDPEVFPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVP 375
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSN-LNQIP 67
A+++P F DP R ++ P + F G C GG LAR+ + L + L+++P
Sbjct: 321 ANRDPEVFPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVP 375
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 12 NGEAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
NG A+++P +F DP RF + + F G CMG LA++ + L L
Sbjct: 315 NGAANRDPSQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRAL 367
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 22 FDPGRFLQDK-LPA-QFMPFQVGKRMCMGGELARMIATLFL-SNLNQIPISPLSSVRLAT 78
F P RFL ++ P+ ++ PF +G+R+C+G + A + + L + + + PL R+
Sbjct: 310 FQPERFLAERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVL- 368
Query: 79 YYQVDLTLTPDQIHLSGLPDGKR 101
+TL P+ GLP R
Sbjct: 369 ---AQVTLRPE----GGLPARPR 384
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 15 AHQEPHRFDPG-RFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQ 65
A+++ F G +F+ D+ P + F G +C+G LAR+ A + + ++
Sbjct: 285 ANRDEEVFHDGEKFIPDRNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSK 336
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQIPISPLSS 73
A+++P F DP R D+ P + + G C G LARM L + L + L
Sbjct: 324 ANRDPDVFPDPDRIDLDRDPNPHLAYGNGHHFCTGAVLARMQTELLVDTL----LERLPG 379
Query: 74 VRLA 77
+RLA
Sbjct: 380 LRLA 383
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 15 AHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQIPISPLSS 73
A+++P F DP R D+ P + + G C G LARM L + L + L
Sbjct: 324 ANRDPDVFPDPDRIDLDRDPNPHLAYGNGHHFCTGAVLARMQTELLVDTL----LERLPG 379
Query: 74 VRLA 77
+RLA
Sbjct: 380 LRLA 383
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 23 DPGRFLQDKLPAQFMPFQVGKRMCMGGELARM 54
DP F D+ P + F G C+G +LAR+
Sbjct: 320 DPDNFRIDRNPNSHVAFGFGTHFCLGNQLARL 351
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 15 AHQEPHRFDPG-RFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQ 65
A+++ F G +F+ D+ P + F G +C+G LAR+ A + + ++
Sbjct: 285 ANRDEEVFHDGEKFIPDRNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSK 336
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 13 GEAHQEPHRF-DPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQ 65
G A+++P F +P F + P + F G +C+G LAR+ A + ++ L Q
Sbjct: 310 GAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQ 363
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 17 QEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARM-IATLFLSNLNQIP 67
+EP RFD R PA + F G C+G +LAR+ + +F + ++P
Sbjct: 324 EEPERFDITR-----RPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLP 370
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 17 QEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARM-IATLFLSNLNQIP 67
+EP RFD R PA + F G C+G +LAR+ + +F + ++P
Sbjct: 324 EEPERFDITR-----RPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLP 370
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 17 QEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARM-IATLFLSNLNQIP 67
+EP RFD R PA + F G C+G +LAR+ + +F + ++P
Sbjct: 324 EEPERFDITR-----RPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLP 370
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 16 HQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNL 63
H++ FD R +++ L F G C+G LARM TL L +L
Sbjct: 329 HEDADTFDATRTVKEHLA-----FGHGVHFCLGAPLARMEVTLALESL 371
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 13 GEAHQEPHRFD-PGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLSNLNQ 65
G A+++P R+D P R+ + + + F G MC+G +AR+ + L+ L +
Sbjct: 327 GSANRDPRRWDDPDRYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALAR 380
>pdb|2IJ9|A Chain A, Crystal Structure Of Uridylate Kinase From Archaeoglobus
Fulgidus
pdb|2IJ9|B Chain B, Crystal Structure Of Uridylate Kinase From Archaeoglobus
Fulgidus
Length = 219
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 9/47 (19%)
Query: 187 EITSKSS---GTIVTLDDITSMSYLAACINETHRYRTIVTLGTPDQV 230
EI S+SS GT V +D LAA I E + +T V LGTP+ +
Sbjct: 165 EIVSRSSAKAGTNVVID------LLAAKIIERSKIKTYVILGTPENI 205
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf14_0417) In Complex With Amppn
Length = 272
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 118 SNLIKQYRVTYESAFLQEAKSNPEIYTSK--QLYHLLGDLFGA 158
SNLI Q+ V + S+FL + E+YT K Q+Y DL G+
Sbjct: 172 SNLIGQFGVGFYSSFL--VSNRVEVYTKKEDQIYRWSSDLKGS 212
>pdb|3FXG|A Chain A, Crystal Structure Of Rhamnonate Dehydratase From
Gibberella Zeae Complexed With Mg
pdb|3FXG|B Chain B, Crystal Structure Of Rhamnonate Dehydratase From
Gibberella Zeae Complexed With Mg
pdb|3FXG|C Chain C, Crystal Structure Of Rhamnonate Dehydratase From
Gibberella Zeae Complexed With Mg
pdb|3FXG|D Chain D, Crystal Structure Of Rhamnonate Dehydratase From
Gibberella Zeae Complexed With Mg
pdb|3FXG|E Chain E, Crystal Structure Of Rhamnonate Dehydratase From
Gibberella Zeae Complexed With Mg
pdb|3FXG|F Chain F, Crystal Structure Of Rhamnonate Dehydratase From
Gibberella Zeae Complexed With Mg
pdb|3FXG|G Chain G, Crystal Structure Of Rhamnonate Dehydratase From
Gibberella Zeae Complexed With Mg
pdb|3FXG|H Chain H, Crystal Structure Of Rhamnonate Dehydratase From
Gibberella Zeae Complexed With Mg
Length = 455
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 65 QIPISPLSSVRLATYYQVDLTLTPDQIHLSGLPDGKRM 102
+P+ P +S + ++Q+ TP Q +L+ PDGK +
Sbjct: 319 DVPVVPHASGPYSYHFQISQPNTPFQEYLANSPDGKSV 356
>pdb|2P0I|A Chain A, Crystal Structure Of L-Rhamnonate Dehydratase From
Gibberella Zeae
pdb|2P0I|B Chain B, Crystal Structure Of L-Rhamnonate Dehydratase From
Gibberella Zeae
pdb|2P0I|C Chain C, Crystal Structure Of L-Rhamnonate Dehydratase From
Gibberella Zeae
pdb|2P0I|D Chain D, Crystal Structure Of L-Rhamnonate Dehydratase From
Gibberella Zeae
pdb|2P0I|E Chain E, Crystal Structure Of L-Rhamnonate Dehydratase From
Gibberella Zeae
pdb|2P0I|F Chain F, Crystal Structure Of L-Rhamnonate Dehydratase From
Gibberella Zeae
pdb|2P0I|G Chain G, Crystal Structure Of L-Rhamnonate Dehydratase From
Gibberella Zeae
pdb|2P0I|H Chain H, Crystal Structure Of L-Rhamnonate Dehydratase From
Gibberella Zeae
Length = 456
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 65 QIPISPLSSVRLATYYQVDLTLTPDQIHLSGLPDGKRM 102
+P+ P +S + ++Q+ TP Q +L+ PDGK +
Sbjct: 319 DVPVVPHASGPYSYHFQISQPNTPFQEYLANSPDGKSV 356
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,925,506
Number of Sequences: 62578
Number of extensions: 255657
Number of successful extensions: 863
Number of sequences better than 100.0: 85
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 706
Number of HSP's gapped (non-prelim): 172
length of query: 243
length of database: 14,973,337
effective HSP length: 96
effective length of query: 147
effective length of database: 8,965,849
effective search space: 1317979803
effective search space used: 1317979803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)