RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy16032
(243 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 66.1 bits (162), Expect = 1e-12
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 1 MVIPFLYSIHMNGEAHQEPHRFDPGRFL----QDKLPAQFMPFQVGKRMCMGGELARMIA 56
+VI LY++H + E P FDP RFL + + F+PF G R C+G LARM
Sbjct: 361 LVIVNLYALHRDPEVFPNPEEFDPERFLDENGKFRKSFAFLPFGAGPRNCLGERLARMEM 420
Query: 57 TLFLSNL 63
LFL+ L
Sbjct: 421 KLFLATL 427
Score = 65.8 bits (161), Expect = 2e-12
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 96 LPDGKRMCMGGELARMIATLFLSNLIKQYRVTYESA------FLQ-----EAKSNPEIYT 144
+ AR L LI++ R T +SA FL + + + T
Sbjct: 199 KYFPGPHGRKLKRARKKIKDLLDKLIEERRETLDSAKKSPRDFLDALLLAKEEEDGSKLT 258
Query: 145 SKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-SSGTIVTLDDIT 203
++L + +LF A DT++ + W L +A +VQ+ LR EI T DD+
Sbjct: 259 DEELRATVLELFFAGTDTTSSTLSWALYELAKHPEVQEKLREEIDEVIGDKRSPTYDDLQ 318
Query: 204 SMSYLAACINETHRYRTIVTLGTP 227
+M YL A I ET R +V L P
Sbjct: 319 NMPYLDAVIKETLRLHPVVPLLLP 342
Score = 30.7 bits (70), Expect = 0.74
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRV 126
G R C+G LARM LFL+ L++ + V
Sbjct: 406 GPRNCLGERLARMEMKLFLATLLQNFEV 433
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 54.3 bits (131), Expect = 1e-08
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 1 MVIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFL 60
++ YS+ N + + P +FDP RFL FMPF +G R C+G + A+ L
Sbjct: 384 QILINYYSLGRNEKYFENPEQFDPSRFLNPDSNDAFMPFSIGPRNCVGQQFAQDELYLAF 443
Query: 61 SNL 63
SN+
Sbjct: 444 SNI 446
Score = 54.0 bits (130), Expect = 2e-08
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 154 DLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSSG-TIVTLDDITSMSYLAACI 212
D F A +DTS + W +L++ ++Q+ EI S +G V L D S Y A I
Sbjct: 290 DFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAII 349
Query: 213 NETHRYRTIVTLGTP 227
ET RY+ + G P
Sbjct: 350 KETLRYKPVSPFGLP 364
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 53.2 bits (128), Expect = 3e-08
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKL-PAQFMPFQVGKRMCMGGELARMIATLFL 60
V+ + +HM+ E + P FDP R+ F+PF +G R+C G +LA++ ++FL
Sbjct: 391 VLAWFRQVHMDPEVYPNPKEFDPSRWDNYTPKAGTFLPFGLGSRLCPGNDLAKLEISIFL 450
Score = 32.4 bits (74), Expect = 0.20
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 144 TSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAE----ITSKSSG-TIVT 198
+++ LL A ++S L W + + +V +AE + G +T
Sbjct: 284 DDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLT 343
Query: 199 LDDITSMSYLAACINETHRYRTI 221
L D+ M YL+ I+ET R I
Sbjct: 344 LKDVRKMEYLSQVIDETLRLINI 366
Score = 28.9 bits (65), Expect = 2.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRVT 127
G R+C G +LA++ ++FL + + YR+
Sbjct: 432 GSRLCPGNDLAKLEISIFLHHFLLGYRLE 460
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 52.0 bits (125), Expect = 7e-08
Identities = 24/64 (37%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKL--PAQFMPFQVGKRMCMGGELARMIATLF 59
V+ + S+H++ E + P++F+P R+ Q+K + F PF G+R+C G +LAR+ A++F
Sbjct: 355 VLAYFRSVHLDEENYDNPYQFNPWRW-QEKDMNNSSFTPFGGGQRLCPGLDLARLEASIF 413
Query: 60 LSNL 63
L +L
Sbjct: 414 LHHL 417
Score = 35.1 bits (81), Expect = 0.029
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYRVTYE 129
G+R+C G +LAR+ A++FL +L+ ++R E
Sbjct: 396 GQRLCPGLDLARLEASIFLHHLVTRFRWVAE 426
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 51.9 bits (124), Expect = 9e-08
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFLS 61
V+P +IH + + +P +FDP RF P FMPF G C G ELA++ ++ +
Sbjct: 367 VLPLFRNIHHSADIFSDPGKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEISVLIH 426
Query: 62 NL 63
+L
Sbjct: 427 HL 428
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 47.2 bits (112), Expect = 4e-06
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 2 VIPFLYSIHMNGEAHQEPHRFDPGRFLQD-----------KLPAQFMPFQVGKRMCMGGE 50
V+P + ++H++ + +P F+P R+ Q+ FMPF G R+C G E
Sbjct: 384 VLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSE 443
Query: 51 LARMIATLFLSNL 63
LA++ +F+ +L
Sbjct: 444 LAKLEMAVFIHHL 456
Score = 27.5 bits (61), Expect = 7.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQYR 125
G R+C G ELA++ +F+ +L+ +
Sbjct: 435 GPRLCAGSELAKLEMAVFIHHLVLNFN 461
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 45.1 bits (107), Expect = 2e-05
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 123 QYRVTYESAFLQEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQD 182
+ R Y L EA T +QL L+ + + DT+ + W + +A D Q+
Sbjct: 242 EERDCYLDFLLSEATH----LTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQE 297
Query: 183 TLRAEITSKSSGTIVTLDDITSMSYLAACINETHRYRTIVTL 224
L EI VT +D+ ++ YL A +ET R + V L
Sbjct: 298 RLYREIREVCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPL 339
Score = 44.7 bits (106), Expect = 2e-05
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRFLQDKLPA----QFMPFQVGKRMCMGGELARMIATLFLS 61
+Y +M+ + + P +DP RFL +K + + M F GKR+C G A +IA + ++
Sbjct: 366 IYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIA 425
Query: 62 NLNQ 65
L Q
Sbjct: 426 RLVQ 429
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 44.7 bits (106), Expect = 2e-05
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 1 MVIPFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQFMPFQVGKRMCMGGELARMIATLFL 60
+V+ + + + + E +P FDP RF +PF G C+G LAR+ + L
Sbjct: 319 VVLLSIGAANRDPEVFPDPDEFDPERF-----NNAHLPFGGGPHRCLGAALARLELKVAL 373
Query: 61 SNL 63
+ L
Sbjct: 374 AEL 376
Score = 35.5 bits (82), Expect = 0.017
Identities = 28/143 (19%), Positives = 39/143 (27%), Gaps = 24/143 (16%)
Query: 84 LTLTPDQIHLSGLPDGKRMCMGGELARMIATLFLSNLIKQYRVTYE----SAFLQEAKSN 139
L L D P + EL + LI + R S L
Sbjct: 174 LLLRLDPDLGPEEPWRRARAARRELDAYLR-----ALIAERRAAPRDDLLSLLLSAEDDG 228
Query: 140 PEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSSGTIVTL 199
+ ++ L L A +T+ + W L + D LRAE
Sbjct: 229 GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEP----------- 277
Query: 200 DDITSMSYLAACINETHRYRTIV 222
L A + ET R V
Sbjct: 278 ----DRPLLEAVVEETLRLYPPV 296
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 40.1 bits (94), Expect = 6e-04
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 135 EAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-SS 193
EA+ EI LY ++ ++ A+++T+ + W + + ++Q LR E+ +
Sbjct: 282 EAQKKGEINEDNVLY-IVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP 340
Query: 194 GTIVTLDDITSMSYLAACINETHRYRTIVTLGTP 227
G VT D + YL A + ET R + L P
Sbjct: 341 GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVP 374
Score = 36.6 bits (85), Expect = 0.010
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 12 NGEAHQEPHRFDPGRFLQDKLPAQ-------FMPFQVGKRMCMGGELARMIATLFLSNLN 64
N E + P F P RFL+++ + F+PF VG+R C G LA I + L L
Sbjct: 404 NPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLV 463
Query: 65 Q 65
Q
Sbjct: 464 Q 464
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 39.6 bits (92), Expect = 9e-04
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 8 SIHMNGEAHQEPHRFDPGRFLQDKLPA----QFMPFQVGKRMCMGGELARMIATLFLSNL 63
++H++ E ++ F+P R+ + F PF G R+C G ELAR+ ++FL L
Sbjct: 376 AVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRL 435
Score = 29.6 bits (66), Expect = 1.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 99 GKRMCMGGELARMIATLFLSNLIKQY 124
G R+C G ELAR+ ++FL L+ ++
Sbjct: 414 GPRLCPGYELARVALSVFLHRLVTRF 439
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 39.4 bits (92), Expect = 0.001
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 156 FGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSSGTIVTLDDITSMSYLAACINET 215
F A +T+ +L+ W L+++A QD +RAE+ G ++D ++ ++ L INE+
Sbjct: 325 FFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINES 384
Query: 216 HRYRTIVTL 224
R TL
Sbjct: 385 LRLYPPATL 393
Score = 35.6 bits (82), Expect = 0.022
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 3 IPFLYSIHMNGEA-HQEPHRFDPGRFLQDKLPA--QFMPFQVGKRMCMGGELARMIATLF 59
IP L +IH + E ++ + F+P RF F+PF G R C+G A M A +
Sbjct: 417 IPVL-AIHHSEELWGKDANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKII 475
Query: 60 LSNL 63
L+ L
Sbjct: 476 LAML 479
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
Length = 516
Score = 36.8 bits (85), Expect = 0.007
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFLQDKLPA------QFMPFQVGKRMCMGGEL 51
++I + + ++P F P RFL+ +P +F+PF G+R C G +L
Sbjct: 409 WAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQL 459
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 35.5 bits (82), Expect = 0.018
Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 130 SAFLQEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEI- 188
S F++ + +T K L ++ + A DT+ + WF+ ++ M V + L +E+
Sbjct: 275 SRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELK 334
Query: 189 -----------TSKSSG---------TIVTLDDITSMSYLAACINETHRYRTIVTLGTPD 228
S ++T D + + YL A I ET R V P
Sbjct: 335 ALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQ-DPK 393
Query: 229 QVYLSSGLPDSERL 242
+ LPD ++
Sbjct: 394 GILEDDVLPDGTKV 407
Score = 28.6 bits (64), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 22 FDPGRFLQDKL-----PAQFMPFQVGKRMCMGGELA 52
F P R+++D + P +F FQ G R+C+G + A
Sbjct: 434 FKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSA 469
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 34.2 bits (78), Expect = 0.052
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 144 TSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSSGTI--VTLDD 201
T ++ +L + A DT++ ++W + + +Q L EI +K+ V+ +D
Sbjct: 303 TDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEED 362
Query: 202 ITSMSYLAACINETHR 217
+ M YL A + E R
Sbjct: 363 VHKMPYLKAVVLEGLR 378
Score = 29.5 bits (66), Expect = 1.7
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 11 MNGEAHQEPHRFDPGRFLQ----------DKLPAQFMPFQVGKRMCMGGELARMIATLFL 60
+ + P F P RFL + MPF VG+R+C G +A + F+
Sbjct: 417 RDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFV 476
Query: 61 SNL 63
+N+
Sbjct: 477 ANM 479
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 34.0 bits (78), Expect = 0.070
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 24/93 (25%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRF-LQDKLPAQ------FMPFQVGKRMCMGGELARMIATL 58
+Y+IH + E + F P RF L +P + ++PF G R C+G + A + A
Sbjct: 382 VYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAI- 440
Query: 59 FLSNLNQIPISPLSSVRLATYYQ-VDLTLTPDQ 90
V LA Q +DL L PDQ
Sbjct: 441 ---------------VALAVLLQRLDLELVPDQ 458
Score = 32.8 bits (75), Expect = 0.14
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 144 TSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSSGTIVTLDDIT 203
+S QL L + A +T+ ++ W L +++ + + E+ G T +DI
Sbjct: 275 SSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGRPPTYEDIK 334
Query: 204 SMSYLAACINETHR 217
+ YL CINE+ R
Sbjct: 335 ELKYLTRCINESMR 348
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
Length = 502
Score = 33.6 bits (76), Expect = 0.086
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 143 YTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITS--KSSG-TIVTL 199
+T + ++ D+ A DT+ + W + + V +AE+ K G T VT
Sbjct: 285 FTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTE 344
Query: 200 DDITSMSYLAACINETHRYRTIVTLGTP 227
DD+ ++ Y A + ET R ++ L P
Sbjct: 345 DDVKNLPYFRALVKETLRIEPVIPLLIP 372
Score = 32.8 bits (74), Expect = 0.15
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 19 PHRFDPGRFLQDKLP-----AQFMPFQVGKRMCMGGELARMIATLFLSNLNQIPISPLSS 73
P F P RFL+ ++ +F+PF G+RMC G L + + P ++
Sbjct: 410 PDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEV-----------PYAN 458
Query: 74 VRLATYYQVDLTLTPDQIHL 93
+ L +++ + PD I++
Sbjct: 459 LLLNFNFKLPNGMKPDDINM 478
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 33.7 bits (77), Expect = 0.091
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 144 TSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSSGTIVTLDDIT 203
+SKQL L + A +TS ++ W +++ E V L+ E+ S T++D+
Sbjct: 388 SSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIEDMK 447
Query: 204 SMSYLAACINETHR 217
+ Y INE+ R
Sbjct: 448 KLKYTTRVINESLR 461
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 32.9 bits (75), Expect = 0.14
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 134 QEAKSNPEIYTSKQLYHLLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEI-TSKS 192
Q+A T ++ LL +LF A DT++ + W + + D+ + E+
Sbjct: 284 QQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVG 343
Query: 193 SGTIVTLDDITSMSYLAACINETHRYRTIVTLGTP 227
+V+ D+ ++YL A I ET R L P
Sbjct: 344 RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLP 378
Score = 27.9 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 14/67 (20%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRFLQDKLPA---------QFMPFQVGKRMCMGGELA-RMI 55
+++I + E +P F P RFL A + +PF G+R+C G RM+
Sbjct: 402 VWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMV 461
Query: 56 ----ATL 58
ATL
Sbjct: 462 TLLTATL 468
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 32.4 bits (74), Expect = 0.19
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 11/59 (18%)
Query: 4 PFLYSIHMNGEAHQEPHRFDPGRFLQDKLPAQ--FMPFQVGKRMCMGGELARMIATLFL 60
PFLY +P F+P R+L L + F F G R+C G EL + + FL
Sbjct: 378 PFLY---------PDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELGIVEISTFL 427
Score = 27.4 bits (61), Expect = 8.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 197 VTLDDITSMSYLAACINETHRYRTIV 222
+ +D SM + A I ET R TIV
Sbjct: 318 IDWNDYKSMRFTRAVIFETSRLATIV 343
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 32.5 bits (74), Expect = 0.20
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 151 LLGDLFGASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSK-SSGTIVTLDDITSMSYLA 209
L+ D+ A+ DTS + W + + V ++ E+ S +V D+ ++YL
Sbjct: 300 LMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLR 359
Query: 210 ACINETHR 217
+ ET R
Sbjct: 360 CVVRETFR 367
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 31.1 bits (70), Expect = 0.51
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 158 ASLDTSTILMRWFLLVMAMEQDVQDTLRAEITSKSSGTIVTLDDITSMSYLAACINETHR 217
A DT++ + WF +++ V +R EI +K +D+ + YL A ++E+ R
Sbjct: 312 AGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKFDN-----EDLEKLVYLHAALSESMR 366
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 30.8 bits (70), Expect = 0.66
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 11/41 (26%)
Query: 22 FDPGRFLQDKLPAQFMP--------FQVGKRMCMGGELARM 54
F P R+L++ F+P FQ G R+C+G E+A M
Sbjct: 416 FKPERWLKN---GVFVPENPFKYPVFQAGLRVCLGKEMALM 453
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 30.6 bits (69), Expect = 0.69
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 6 LYSIHMNGEAHQEPHRFDPGRFLQDKLPA--------QFMPFQVGKRMCMGGELARMIAT 57
+++I + + + P F P RFL +K + +PF G+R+C G + ++
Sbjct: 394 IWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVE 453
Query: 58 LFLSNL 63
L L
Sbjct: 454 YILGTL 459
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 28.9 bits (64), Expect = 3.1
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 119 NLIKQYRVTYESAFLQEAKSNPEI--YTSKQLYHLLGDLFGASLDTSTILMRWFLLVM-- 174
N KQ ++ +Q K P +T + + ++ D+ DT+ ++ W + +
Sbjct: 258 NRPKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIK 317
Query: 175 ---AMEQDVQDTLRAEITSKSSGTIVTLDDITSMSYLAACINETHRYRTIVTL 224
AM++ QD +R I K V+ +DI ++ YL A I E+ R ++ +
Sbjct: 318 YPEAMKK-AQDEVRNVIGDKG---YVSEEDIPNLPYLKAVIKESLRLEPVIPI 366
Score = 27.7 bits (61), Expect = 7.0
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query: 19 PHRFDPGRFLQDKLPAQF-------MPFQVGKRMCMGGELARMIATLFLSNL 63
P+ F P RF+++ F +PF G+RMC L + + +NL
Sbjct: 407 PNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANL 458
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase.
Length = 543
Score = 28.8 bits (64), Expect = 3.2
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 83 DLTLTPDQIHLSGLPDGKRMCMGGELARMIATLFLSNLIK--QYRVTYESAFLQEAKSNP 140
++TLT + + GKR C L I T+ L+ L++ ++++ ++ +S+
Sbjct: 459 EVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH 518
Query: 141 EIYTSKQLYHLLGDL 155
+++ SK L ++G+L
Sbjct: 519 DMFLSKPLV-MVGEL 532
Score = 28.5 bits (63), Expect = 3.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 7 YSIHMNGEAHQEPHRFDPGRFLQD-------KLPAQFMPFQVGKRMCMGGELARMIATLF 59
Y + N + +P F P R L + + +F+ F GKR C L I T+
Sbjct: 433 YGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMM 492
Query: 60 LSNLNQ 65
L+ L Q
Sbjct: 493 LARLLQ 498
>gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division
and chromosome partitioning].
Length = 420
Score = 28.1 bits (63), Expect = 4.0
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 6/37 (16%)
Query: 51 LARMIATLFLSNLNQIPI------SPLSSVRLATYYQ 81
LA +A L S N P SVRLA YY
Sbjct: 117 LAEQLAALQRSGRNPPPALLVSPEDAQRSVRLAIYYG 153
>gnl|CDD|179668 PRK03893, PRK03893, putative sialic acid transporter; Provisional.
Length = 496
Score = 27.7 bits (62), Expect = 6.2
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 17/100 (17%)
Query: 34 AQFMPFQV---GKRMCMGGELARMIATLFLSNLNQIPISPLSSVRLATYYQVDLTLTPDQ 90
A F+ F V GKR G + M+ + + L PI L L TY + DL P
Sbjct: 260 AIFISFMVQSSGKRWPTG--VMLMV-VVLFAFLYSWPIQAL----LPTYLKTDLGYDPHT 312
Query: 91 IH----LSGLPDGKRMCMGGELARMIAT---LFLSNLIKQ 123
+ SG C+GG L + T S LI Q
Sbjct: 313 VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQ 352
>gnl|CDD|237536 PRK13873, PRK13873, conjugal transfer ATPase TrbE; Provisional.
Length = 811
Score = 27.2 bits (61), Expect = 8.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 199 LDDITSMSYLAACINETHRYRTIVTLGTPDQVYLSSGLPDS 239
LDD +++YL + I+ T R+R V TP +YL + L D
Sbjct: 178 LDDAETLTYLHSTIS-TRRHRVRVP-ETP--MYLDALLADQ 214
>gnl|CDD|236152 PRK08115, PRK08115, ribonucleotide-diphosphate reductase subunit
alpha; Validated.
Length = 858
Score = 27.1 bits (60), Expect = 9.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 181 QDTLRAEITSKSSGTIVTLDDITSMSYL 208
++TL + KSSG++ LDDI +++L
Sbjct: 229 RNTLARGVNGKSSGSVSWLDDIAKLTHL 256
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.136 0.396
Gapped
Lambda K H
0.267 0.0744 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 12,480,581
Number of extensions: 1154493
Number of successful extensions: 965
Number of sequences better than 10.0: 1
Number of HSP's gapped: 947
Number of HSP's successfully gapped: 56
Length of query: 243
Length of database: 10,937,602
Length adjustment: 94
Effective length of query: 149
Effective length of database: 6,768,326
Effective search space: 1008480574
Effective search space used: 1008480574
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.1 bits)