Your job contains 1 sequence.
>psy1604
MGSTSEVSPPVDQVVEAEVIEVEVTEVKTGHVHVVRVEEAVVAMATEVTAEVVALAMGME
VEMEVVEAVTEEKIGHVRVVRAILRPDSRFSSGGGGGGDRGNSKPGDWMCSCGASNFAKR
DACFKCSEPKPEGAGGGAPGGADGAPFDPAKPPLYIPKDVDQSEDNLFSSGIQTGINFSG
WENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMG
CAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS
SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM
LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGR
ISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKNYIF
IAVGIIGGASTDVVQTILEVPKQQKKKKLLELLREKDEDGVIVFVSTIRNADFIACYLCE
TEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEID
EYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLKFGGGGGGYGR
GGDAFGARDIRHDPDAAPVWGGSGATEPEESWD
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1604
(693 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd... 514 8.0e-82 2
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica... 514 8.0e-82 2
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd... 505 9.3e-82 2
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica... 505 9.3e-82 2
WB|WBGene00001600 - symbol:glh-3 species:6239 "Caenorhabd... 471 1.5e-76 2
UNIPROTKB|O01836 - symbol:glh-3 "ATP-dependent RNA helica... 471 1.5e-76 2
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 694 2.1e-68 1
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN... 681 5.1e-67 1
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe... 680 6.5e-67 1
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ... 677 1.3e-66 1
GENEDB_PFALCIPARUM|PF08_0096 - symbol:PF08_0096 "RNA heli... 376 1.6e-66 2
UNIPROTKB|Q8IAU1 - symbol:PF08_0096 "RNA helicase, putati... 376 1.6e-66 2
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 668 1.2e-65 1
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN... 666 2.0e-65 1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN... 666 2.0e-65 1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN... 666 2.0e-65 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 663 4.1e-65 1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 662 5.2e-65 1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN... 662 5.2e-65 1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol... 657 1.8e-64 1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN... 657 1.8e-64 1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN... 651 7.6e-64 1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ... 648 1.6e-63 1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 625 5.4e-63 2
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 642 6.9e-63 1
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ... 631 1.0e-61 1
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri... 629 1.6e-61 1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 628 2.1e-61 1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 378 2.2e-61 2
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 625 4.3e-61 1
WB|WBGene00017162 - symbol:ddx-23 species:6239 "Caenorhab... 386 2.2e-60 3
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 611 1.3e-59 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 610 1.7e-59 1
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 406 3.4e-59 2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 607 3.5e-59 1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 599 2.5e-58 1
UNIPROTKB|I3LRT7 - symbol:DDX4 "Probable ATP-dependent RN... 599 2.5e-58 1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 596 5.1e-58 1
DICTYBASE|DDB_G0277857 - symbol:helB2 "putative U5 small ... 343 6.4e-58 2
POMBASE|SPCC63.11 - symbol:prp28 "U5 snRNP-associated pro... 380 8.3e-58 2
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 594 8.4e-58 1
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 594 8.4e-58 1
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 594 8.4e-58 1
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 594 8.4e-58 1
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 593 1.1e-57 1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 592 1.4e-57 1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 592 1.4e-57 1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 592 1.4e-57 1
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 592 1.4e-57 1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 591 1.7e-57 1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 591 1.7e-57 1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 591 1.7e-57 1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 591 1.7e-57 1
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 386 2.1e-57 3
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 386 2.1e-57 3
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 386 2.1e-57 3
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 386 2.1e-57 3
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 589 2.8e-57 1
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 380 3.9e-57 3
UNIPROTKB|D6RCM4 - symbol:DDX4 "Probable ATP-dependent RN... 587 4.6e-57 1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 584 9.6e-57 1
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 579 3.3e-56 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 579 3.3e-56 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 578 4.2e-56 1
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 577 5.3e-56 1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 539 7.8e-56 2
GENEDB_PFALCIPARUM|PFE0925c - symbol:PFE0925c "snrnp prot... 362 1.0e-55 3
UNIPROTKB|Q8I0W7 - symbol:PFE0925c "Snrnp protein, putati... 362 1.0e-55 3
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 569 3.7e-55 1
ZFIN|ZDB-GENE-030131-6215 - symbol:ddx23 "DEAD (Asp-Glu-A... 371 1.7e-54 2
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd... 556 8.9e-54 1
WB|WBGene00001601 - symbol:glh-4 species:6239 "Caenorhabd... 339 2.2e-52 2
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic... 541 3.5e-52 1
UNIPROTKB|B4E132 - symbol:DDX3Y "Uncharacterized protein"... 534 1.9e-51 1
CGD|CAL0001091 - symbol:orf19.672 species:5476 "Candida a... 325 2.8e-51 2
UNIPROTKB|Q59W52 - symbol:PRP28 "Pre-mRNA-splicing ATP-de... 325 2.8e-51 2
UNIPROTKB|I3LNN1 - symbol:DDX23 "Uncharacterized protein"... 384 2.8e-51 2
GENEDB_PFALCIPARUM|PFL1310c - symbol:PFL1310c "ATP-depend... 426 3.4e-51 2
UNIPROTKB|P21507 - symbol:srmB "SrmB, DEAD-box RNA helica... 349 8.4e-51 2
ASPGD|ASPL0000051195 - symbol:AN1634 species:162425 "Emer... 331 2.4e-49 2
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 459 5.4e-47 2
CGD|CAL0005725 - symbol:PRP5 species:5476 "Candida albica... 344 1.8e-46 2
UNIPROTKB|Q5ADL0 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 344 1.8e-46 2
DICTYBASE|DDB_G0292010 - symbol:DDB_G0292010 species:4468... 261 3.8e-46 3
POMBASE|SPAC30D11.03 - symbol:ddx27 "ATP-dependent RNA he... 338 6.6e-45 2
UNIPROTKB|Q9KU63 - symbol:VC_0660 "ATP-dependent RNA heli... 306 1.6e-44 2
TIGR_CMR|VC_0660 - symbol:VC_0660 "ATP-dependent RNA heli... 306 1.6e-44 2
WB|WBGene00019245 - symbol:sacy-1 species:6239 "Caenorhab... 466 3.1e-44 1
UNIPROTKB|F1NAH6 - symbol:LOC100859810 "Uncharacterized p... 465 3.9e-44 1
RGD|1559513 - symbol:RGD1559513 "similar to DEAD (Asp-Glu... 460 1.3e-43 1
RGD|1311758 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box po... 460 1.3e-43 1
MGI|MGI:1920185 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) bo... 460 1.3e-43 1
UNIPROTKB|A3KN07 - symbol:DDX41 "Uncharacterized protein"... 460 1.3e-43 1
UNIPROTKB|E2R052 - symbol:DDX41 "Uncharacterized protein"... 460 1.3e-43 1
UNIPROTKB|J9NZF6 - symbol:DDX41 "Uncharacterized protein"... 460 1.3e-43 1
UNIPROTKB|J3KNN5 - symbol:DDX41 "Probable ATP-dependent R... 460 1.3e-43 1
UNIPROTKB|Q9UJV9 - symbol:DDX41 "Probable ATP-dependent R... 460 1.3e-43 1
TAIR|locus:2119176 - symbol:AT4G33370 species:3702 "Arabi... 459 1.7e-43 1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p... 458 2.2e-43 1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein... 458 2.2e-43 1
WARNING: Descriptions of 825 database sequences were not reported due to the
limiting value of parameter V = 100.
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 514 (186.0 bits), Expect = 8.0e-82, Sum P(2) = 8.0e-82
Identities = 114/258 (44%), Positives = 159/258 (61%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPP---RPIESFESAGLREILVK 211
Y+P + D E+ I G+ F+ + + EVK++ D P + ++F A L E + K
Sbjct: 507 YVPVE-DNMEEVFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKK 565
Query: 212 NLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVT-- 269
N+ + YTK TPIQ+Y +P +G D+M CAQTGSGKTAAFL+PIM L++ +L T
Sbjct: 566 NVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE-NDLNTAG 624
Query: 270 -GYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNIL 328
G C P II PTREL QI+ K+AY ++++I YGG + + Q+EKG I+
Sbjct: 625 EGGC-YPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATII 683
Query: 329 VATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPDVANRQTL 387
V T+GR+K + G I L RF VLDEADRM+D MGF DI ++ + +MP NRQTL
Sbjct: 684 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTL 743
Query: 388 MFSATFPETIQKKGCNIL 405
MFSATFP+++Q+ N L
Sbjct: 744 MFSATFPDSVQEAARNHL 761
Score = 343 (125.8 bits), Expect = 8.0e-82, Sum P(2) = 8.0e-82
Identities = 78/189 (41%), Positives = 108/189 (57%)
Query: 474 IQKNYIFIAVGIIGGASTDVVQT------------ILEVPXXXXXXXXXXXXXXXDEDGV 521
+++ YI +A+ IG A+ V+Q +LE+
Sbjct: 761 LKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKT 820
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVFVS AD +A L ++ +IHG+R Q +R +A+ F+ VL+ATAVA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
LDIKG+ HVINYD+P ID+Y+HRIGRTGRVGN GRATSF D + + +LVR+L A
Sbjct: 881 LDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISEDCN--LLSELVRVLSDA 938
Query: 642 GQPVPEFLK 650
Q VPE+++
Sbjct: 939 DQLVPEWMQ 947
Score = 226 (84.6 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 50/106 (47%), Positives = 68/106 (64%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPD 457
+KG I+V T+GR+K + G I L RF VLDEADRM+D MGF DI ++ + +MP
Sbjct: 677 EKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPK 736
Query: 458 VANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQ 495
NRQTLMFSATFP+++Q+ YI +A+ IG A+ V+Q
Sbjct: 737 KENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQ 782
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 514 (186.0 bits), Expect = 8.0e-82, Sum P(2) = 8.0e-82
Identities = 114/258 (44%), Positives = 159/258 (61%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPP---RPIESFESAGLREILVK 211
Y+P + D E+ I G+ F+ + + EVK++ D P + ++F A L E + K
Sbjct: 507 YVPVE-DNMEEVFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKK 565
Query: 212 NLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVT-- 269
N+ + YTK TPIQ+Y +P +G D+M CAQTGSGKTAAFL+PIM L++ +L T
Sbjct: 566 NVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE-NDLNTAG 624
Query: 270 -GYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNIL 328
G C P II PTREL QI+ K+AY ++++I YGG + + Q+EKG I+
Sbjct: 625 EGGC-YPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATII 683
Query: 329 VATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPDVANRQTL 387
V T+GR+K + G I L RF VLDEADRM+D MGF DI ++ + +MP NRQTL
Sbjct: 684 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTL 743
Query: 388 MFSATFPETIQKKGCNIL 405
MFSATFP+++Q+ N L
Sbjct: 744 MFSATFPDSVQEAARNHL 761
Score = 343 (125.8 bits), Expect = 8.0e-82, Sum P(2) = 8.0e-82
Identities = 78/189 (41%), Positives = 108/189 (57%)
Query: 474 IQKNYIFIAVGIIGGASTDVVQT------------ILEVPXXXXXXXXXXXXXXXDEDGV 521
+++ YI +A+ IG A+ V+Q +LE+
Sbjct: 761 LKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKT 820
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVFVS AD +A L ++ +IHG+R Q +R +A+ F+ VL+ATAVA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
LDIKG+ HVINYD+P ID+Y+HRIGRTGRVGN GRATSF D + + +LVR+L A
Sbjct: 881 LDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISEDCN--LLSELVRVLSDA 938
Query: 642 GQPVPEFLK 650
Q VPE+++
Sbjct: 939 DQLVPEWMQ 947
Score = 226 (84.6 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 50/106 (47%), Positives = 68/106 (64%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPD 457
+KG I+V T+GR+K + G I L RF VLDEADRM+D MGF DI ++ + +MP
Sbjct: 677 EKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPK 736
Query: 458 VANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQ 495
NRQTLMFSATFP+++Q+ YI +A+ IG A+ V+Q
Sbjct: 737 KENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQ 782
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 505 (182.8 bits), Expect = 9.3e-82, Sum P(2) = 9.3e-82
Identities = 112/252 (44%), Positives = 157/252 (62%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPP---RPIESFESAGLREILVK 211
Y+P + D ED I G+ F+ + + EVK++ +P ++F A L E + K
Sbjct: 296 YVPVE-DNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQK 354
Query: 212 NLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVT-- 269
N+ + Y+K TPIQ+YA+P +G D+M CAQTGSGKTAAFL+PIM L++ L T
Sbjct: 355 NVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDD-NNLNTAG 413
Query: 270 -GYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNIL 328
G C P II PTREL QI+ K+AY ++++I YGG + + Q+EKG I+
Sbjct: 414 EGGC-YPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATII 472
Query: 329 VATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPDVANRQTL 387
V T+GR+K + G I L RF VLDEADRM+D MGF DI+ ++ + +MP NRQTL
Sbjct: 473 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTL 532
Query: 388 MFSATFPETIQK 399
MFSATFP+++Q+
Sbjct: 533 MFSATFPDSVQE 544
Score = 341 (125.1 bits), Expect = 9.3e-82, Sum P(2) = 9.3e-82
Identities = 82/216 (37%), Positives = 117/216 (54%)
Query: 447 QHVMQHSTMPDVANRQTLMFSATFPETIQKNYIFIAVGIIGGASTDVVQT---------- 496
Q +M +T PD F +++NY+ IA+ IG A+ V+Q
Sbjct: 530 QTLMFSATFPDSVQEAARAF-------LRENYVMIAIDKIGAANKCVLQEFERCERSEKK 582
Query: 497 --ILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQ 554
+LE+ +VFVS AD +A L ++ +IHG+R Q
Sbjct: 583 DKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQ 642
Query: 555 SQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGN 614
+R +A+ F+ VL+ATAVA RGLDIKG+ HVINYD+P ID+Y+HRIGRTGRVGN
Sbjct: 643 RERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN 702
Query: 615 KGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
GRATSF +D ++ +LV +L A Q VP++++
Sbjct: 703 SGRATSFIS--EDCSLLSELVGVLADAQQIVPDWMQ 736
Score = 234 (87.4 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 51/106 (48%), Positives = 70/106 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPD 457
+KG I+V T+GR+K + G I L RF VLDEADRM+D MGF DI+ ++ + +MP
Sbjct: 466 EKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPR 525
Query: 458 VANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQ 495
NRQTLMFSATFP+++Q+ NY+ IA+ IG A+ V+Q
Sbjct: 526 KENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQ 571
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 505 (182.8 bits), Expect = 9.3e-82, Sum P(2) = 9.3e-82
Identities = 112/252 (44%), Positives = 157/252 (62%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPP---RPIESFESAGLREILVK 211
Y+P + D ED I G+ F+ + + EVK++ +P ++F A L E + K
Sbjct: 296 YVPVE-DNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQK 354
Query: 212 NLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVT-- 269
N+ + Y+K TPIQ+YA+P +G D+M CAQTGSGKTAAFL+PIM L++ L T
Sbjct: 355 NVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDD-NNLNTAG 413
Query: 270 -GYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNIL 328
G C P II PTREL QI+ K+AY ++++I YGG + + Q+EKG I+
Sbjct: 414 EGGC-YPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATII 472
Query: 329 VATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPDVANRQTL 387
V T+GR+K + G I L RF VLDEADRM+D MGF DI+ ++ + +MP NRQTL
Sbjct: 473 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTL 532
Query: 388 MFSATFPETIQK 399
MFSATFP+++Q+
Sbjct: 533 MFSATFPDSVQE 544
Score = 341 (125.1 bits), Expect = 9.3e-82, Sum P(2) = 9.3e-82
Identities = 82/216 (37%), Positives = 117/216 (54%)
Query: 447 QHVMQHSTMPDVANRQTLMFSATFPETIQKNYIFIAVGIIGGASTDVVQT---------- 496
Q +M +T PD F +++NY+ IA+ IG A+ V+Q
Sbjct: 530 QTLMFSATFPDSVQEAARAF-------LRENYVMIAIDKIGAANKCVLQEFERCERSEKK 582
Query: 497 --ILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQ 554
+LE+ +VFVS AD +A L ++ +IHG+R Q
Sbjct: 583 DKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQ 642
Query: 555 SQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGN 614
+R +A+ F+ VL+ATAVA RGLDIKG+ HVINYD+P ID+Y+HRIGRTGRVGN
Sbjct: 643 RERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN 702
Query: 615 KGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
GRATSF +D ++ +LV +L A Q VP++++
Sbjct: 703 SGRATSFIS--EDCSLLSELVGVLADAQQIVPDWMQ 736
Score = 234 (87.4 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 51/106 (48%), Positives = 70/106 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPD 457
+KG I+V T+GR+K + G I L RF VLDEADRM+D MGF DI+ ++ + +MP
Sbjct: 466 EKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPR 525
Query: 458 VANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQ 495
NRQTLMFSATFP+++Q+ NY+ IA+ IG A+ V+Q
Sbjct: 526 KENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQ 571
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 471 (170.9 bits), Expect = 1.5e-76, Sum P(2) = 1.5e-76
Identities = 104/257 (40%), Positives = 155/257 (60%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPP---RPIESFESAGLREILVK 211
Y+P VD+ E+ I G F + + V++ P +P +SF + + + + +
Sbjct: 253 YVPV-VDKMEEVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRR 311
Query: 212 NLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHL-LESPGEL-VT 269
N++++ YT+ TPIQ+Y +P +G+D++ CAQTGSGKTAAFL+PIM L LE
Sbjct: 312 NVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAE 371
Query: 270 GYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILV 329
G C P II PTREL QI+ K++Y SV++I YGG + + Q+ KGC I+V
Sbjct: 372 GGC-YPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIV 430
Query: 330 ATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPDVANRQTLM 388
T+GR+K + G I L R++VLDEADRM+D MGF +I+ ++ + MP RQT+M
Sbjct: 431 GTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMM 490
Query: 389 FSATFPETIQKKGCNIL 405
FSATFP ++Q+ +L
Sbjct: 491 FSATFPSSVQEAARKLL 507
Score = 326 (119.8 bits), Expect = 1.5e-76, Sum P(2) = 1.5e-76
Identities = 66/129 (51%), Positives = 85/129 (65%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVFV+ + AD +A + ++ +IHG+R Q +R A+ F++ VL+ATAV RG
Sbjct: 567 IVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERG 626
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
LDIKG+ HVINYD+P ID+Y+HRIGRTGRVGN GRATSF D I LVR L A
Sbjct: 627 LDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADA 686
Query: 642 GQPVPEFLK 650
Q VP ++K
Sbjct: 687 EQVVPSWMK 695
Score = 213 (80.0 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 46/105 (43%), Positives = 66/105 (62%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPDV 458
KGC I+V T+GR+K + G I L R++VLDEADRM+D MGF +I+ ++ + MP
Sbjct: 424 KGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKN 483
Query: 459 ANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQ 495
RQT+MFSATFP ++Q+ +Y I + IG A+ V+Q
Sbjct: 484 DKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQ 528
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 471 (170.9 bits), Expect = 1.5e-76, Sum P(2) = 1.5e-76
Identities = 104/257 (40%), Positives = 155/257 (60%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPP---RPIESFESAGLREILVK 211
Y+P VD+ E+ I G F + + V++ P +P +SF + + + + +
Sbjct: 253 YVPV-VDKMEEVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRR 311
Query: 212 NLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHL-LESPGEL-VT 269
N++++ YT+ TPIQ+Y +P +G+D++ CAQTGSGKTAAFL+PIM L LE
Sbjct: 312 NVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAE 371
Query: 270 GYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILV 329
G C P II PTREL QI+ K++Y SV++I YGG + + Q+ KGC I+V
Sbjct: 372 GGC-YPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIV 430
Query: 330 ATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPDVANRQTLM 388
T+GR+K + G I L R++VLDEADRM+D MGF +I+ ++ + MP RQT+M
Sbjct: 431 GTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMM 490
Query: 389 FSATFPETIQKKGCNIL 405
FSATFP ++Q+ +L
Sbjct: 491 FSATFPSSVQEAARKLL 507
Score = 326 (119.8 bits), Expect = 1.5e-76, Sum P(2) = 1.5e-76
Identities = 66/129 (51%), Positives = 85/129 (65%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVFV+ + AD +A + ++ +IHG+R Q +R A+ F++ VL+ATAV RG
Sbjct: 567 IVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERG 626
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
LDIKG+ HVINYD+P ID+Y+HRIGRTGRVGN GRATSF D I LVR L A
Sbjct: 627 LDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADA 686
Query: 642 GQPVPEFLK 650
Q VP ++K
Sbjct: 687 EQVVPSWMK 695
Score = 213 (80.0 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 46/105 (43%), Positives = 66/105 (62%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD-MGFLGDIQHVMQHSTMPDV 458
KGC I+V T+GR+K + G I L R++VLDEADRM+D MGF +I+ ++ + MP
Sbjct: 424 KGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKN 483
Query: 459 ANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQ 495
RQT+MFSATFP ++Q+ +Y I + IG A+ V+Q
Sbjct: 484 DKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQ 528
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 139/260 (53%), Positives = 180/260 (69%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+KGCN+L T GRL D++ RG++ L+ VR +VLDEADRMLDMGF D++ ++ MP
Sbjct: 306 EKGCNVLCGTPGRLLDMIGRGKVGLSKVRHLVLDEADRMLDMGFEPDMRRLVGSPGMPSK 365
Query: 459 ANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXX 510
RQTLMFSATFPE IQ+ +Y+F+AVG++GGA TDV QT L+V
Sbjct: 366 EERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGACTDVEQTFLQVTKFNKREQLL 425
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+ +VFV T R ADFIA +LC+ ++ TTSIHG R Q +RE+A+ DF++ K
Sbjct: 426 DLLRTIGSERTMVFVETKRQADFIAAFLCQEKVPTTSIHGDREQREREKALADFRSGKCP 485
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
VLVAT+VASRGLDI ++HV+N+DLP ID+YVHRIGRTGR GN GRA SFYDPD D +
Sbjct: 486 VLVATSVASRGLDIPDVQHVVNFDLPNTIDDYVHRIGRTGRCGNTGRAVSFYDPDVDSQL 545
Query: 631 AKDLVRILEQAGQPVPEFLK 650
A+ LV IL +A Q VP +L+
Sbjct: 546 ARSLVGILAKAQQEVPSWLE 565
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 121/253 (47%), Positives = 171/253 (67%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + + ED++FS + GINF ++++ V VSG N P I +FE A L E L N+
Sbjct: 139 YIPPSLPEDEDSIFSH-YKMGINFDKYDDILVDVSGTNLPAAIMTFEEAKLCESLENNIS 197
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCA- 273
+S Y KPTP+QKY +P GRDLM CAQTGSGKTAAFL+PI+ L+ + G + +
Sbjct: 198 RSGYVKPTPVQKYGLPIISAGRDLMACAQTGSGKTAAFLLPILQQLM-ADGVAASRFSEI 256
Query: 274 -QPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE +I APTREL+ QI++ A K+++ + ++ + YGG ++ + R++EKGCN+L T
Sbjct: 257 QEPEAVIVAPTRELINQIYQEARKFSFGTCVRPVVVYGGVNTGYQMREIEKGCNVLCGTP 316
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL D++ RG++ L+ VR +VLDEADRMLDMGF D++ ++ MP RQTLMFSAT
Sbjct: 317 GRLLDMIGRGKVGLSKVRHLVLDEADRMLDMGFEPDMRRLVGSPGMPSKEERQTLMFSAT 376
Query: 393 FPETIQKKGCNIL 405
FPE IQ+ + L
Sbjct: 377 FPEDIQRLAADFL 389
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 143/303 (47%), Positives = 193/303 (63%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+KGCNIL AT GRL DI+ + +I L+ +R++VLDEADRMLDMGF +I+ +M MP
Sbjct: 399 EKGCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTK 458
Query: 459 ANRQTLMFSATFPETIQK---NYI-----FIAVGIIGGASTDVVQTILEVPXXXXXXXXX 510
RQTLMFSAT+PE I++ NY+ F+ VG++GGA +DV QT+LE+
Sbjct: 459 EKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGGACSDVAQTVLEMRENGKMEKLL 518
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+++ ++FV+T + ADFIA YLC+ + ++TSIHG R Q QRE A+ DF+T K
Sbjct: 519 EILKSSEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGKCT 578
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
V+V TAVA+RGLDI+ ++HVINYD+P+E+DEYVHRIGRTGR GN G+ATSF++ D I
Sbjct: 579 VIVCTAVAARGLDIENVQHVINYDVPKEVDEYVHRIGRTGRCGNTGKATSFFNVQDDHVI 638
Query: 631 AKDLVRILEQAGQPVPEFLKXXXXXXXXXXXXXXXXXXXIRHDPDAAPVWGGSGATEPEE 690
A+ LV+IL A Q VP +L+ + V S A E E
Sbjct: 639 ARPLVKILTDAHQEVPAWLEEIAFGGHGALNSFYAADS-MGEQAGGNAVTTPSFAQEEEA 697
Query: 691 SWD 693
SWD
Sbjct: 698 SWD 700
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 122/253 (48%), Positives = 168/253 (66%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP EDN+F Q+GINF ++ + V V+G + P I +FE A L E L +N+
Sbjct: 232 YIPPPPPDGEDNIFRQ-YQSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVA 290
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCA- 273
++ Y K TP+QK++IP + GRDLM CAQTGSGKTAAFL+PI+ +++ G + Y
Sbjct: 291 RAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNE-GITASQYLQL 349
Query: 274 -QPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTREL+ QI+ A K++Y + ++ + YGG +H R +EKGCNIL AT
Sbjct: 350 QEPEAIIIAPTRELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATP 409
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L+ +R++VLDEADRMLDMGF +I+ +M MP RQTLMFSAT
Sbjct: 410 GRLLDIVSKEKIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSAT 469
Query: 393 FPETIQKKGCNIL 405
+PE I++ N L
Sbjct: 470 YPEEIRRLASNYL 482
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 133/259 (51%), Positives = 184/259 (71%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KGCN+L AT GRL D++ RG+I L+ VR++VLDEADRMLDMGF +++ ++ MP
Sbjct: 403 KGCNVLCATPGRLHDLIGRGKIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKE 462
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSAT+PE IQ+ +YIF+AVG++GGA +DV QT+++V
Sbjct: 463 ERQTLMFSATYPEDIQRMAADFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLE 522
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ +VFV T R+ADFIA +LC+ +I+TTSIHG R Q +RE+A+ DF+ V
Sbjct: 523 LLRATGNERTMVFVETKRSADFIATFLCQEKISTTSIHGDREQREREKALSDFRLGHCPV 582
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VA+RGLDI+ ++HV+N+D+P IDEYVHRIGRTGR GN GRA SF++P+ D +A
Sbjct: 583 LVATSVAARGLDIEQVQHVVNFDMPSSIDEYVHRIGRTGRCGNTGRAVSFFNPESDTPLA 642
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ LV++L A Q VP++L+
Sbjct: 643 RSLVKVLSGAQQVVPKWLE 661
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 138/322 (42%), Positives = 199/322 (61%)
Query: 154 LYIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNL 213
+Y+P + E ++FS TGINF ++++ V VSG NPP+ I +FE AGL + L KN+
Sbjct: 234 VYVPPPPPEEESSIFSH-YATGINFDKYDDILVDVSGSNPPKAIMTFEEAGLCDSLSKNV 292
Query: 214 KKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCA 273
KS Y KPTP+QK+ IP GRDLM CAQTGSGKTAAFL+PI+ + + G + +
Sbjct: 293 SKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFM-TDGVAASKFSE 351
Query: 274 --QPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVAT 331
+PE II APTREL+ QI+ A K+AY + ++ + YGG ++ + R++ KGCN+L AT
Sbjct: 352 IQEPEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCAT 411
Query: 332 MGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSA 391
GRL D++ RG+I L+ VR++VLDEADRMLDMGF +++ ++ MP RQTLMFSA
Sbjct: 412 PGRLHDLIGRGKIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSA 471
Query: 392 TFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDE---ADRMLDMGFLGDIQH 448
T+PE IQ+ + L L + G S V +D+ D++L++ ++
Sbjct: 472 TYPEDIQRMAADFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLEL-----LRA 526
Query: 449 VMQHSTMPDVANRQTLMFSATF 470
TM V +++ F ATF
Sbjct: 527 TGNERTMVFVETKRSADFIATF 548
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 138/259 (53%), Positives = 180/259 (69%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+ + +I L V+++VLDEADRMLDMGF +++ ++ MP
Sbjct: 415 QGCNILCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 474
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE IQ+ NY+F+AVG +GGA DV QTIL+V
Sbjct: 475 QRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVE 534
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
++ +VFV T + ADFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K V
Sbjct: 535 ILRSIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPV 594
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR GN GRA SF+DP+ D +A
Sbjct: 595 LVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDNHLA 654
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ LV++L A Q VP +L+
Sbjct: 655 QPLVKVLSDAQQDVPAWLE 673
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 121/247 (48%), Positives = 167/247 (67%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 247 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 305
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 306 KAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHD-GITASRFKEL 364
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTREL+ QI+ A K+++ + ++ + YGG + RQ+ +GCNIL AT
Sbjct: 365 QEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGYSIRQIVQGCNILCATP 424
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L V+++VLDEADRMLDMGF +++ ++ MP RQTLMFSAT
Sbjct: 425 GRLMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 484
Query: 393 FPETIQK 399
FPE IQ+
Sbjct: 485 FPEEIQR 491
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 376 (137.4 bits), Expect = 1.6e-66, Sum P(2) = 1.6e-66
Identities = 103/269 (38%), Positives = 147/269 (54%)
Query: 155 YIPKDVDQSEDNLFSS-GIQTGINFSGWENVEVKVSGDNPPRPIESFE--SAGLREILVK 211
Y P+ ++ N+ S G+ + S VE+ IE+F+ S L E+L+
Sbjct: 318 YYPEKEEEIYSNVKSEKGVNFDLYNS--IPVEISGFNSENVAAIETFDDPSLNLNELLLS 375
Query: 212 NLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL--ESP----- 264
N+KK NY K TPIQKY++ + DL+G AQTGSGKTA +L+PI++H+L + P
Sbjct: 376 NIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYY 435
Query: 265 --GELVTGY-----CAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHF 317
+ Y C P +I APTREL +QI A K+ + + +K + YGG +
Sbjct: 436 EQNNKTSNYYFNRVCL-PICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQ 494
Query: 318 NRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
L+KG +I+VAT GRL DIL++G+I L F+VLDEADRMLDMGF I+ ++
Sbjct: 495 LSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYD 554
Query: 378 MPDVANRQTLMFSATFPETIQKKGCNILV 406
MP N + S E KK CN ++
Sbjct: 555 MP--GNDNDVHTSENKVE--YKKYCNDII 579
Score = 370 (135.3 bits), Expect = 1.6e-66, Sum P(2) = 1.6e-66
Identities = 84/199 (42%), Positives = 114/199 (57%)
Query: 457 DVANRQTLMFSATFPETIQ---KNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXX 509
D+ RQT+MFSATF + IQ K Y+ F+ VG +G + + Q ++ V
Sbjct: 577 DIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYL 636
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
+ I+FV T R AD I +L ++ IHG + Q +RE+A+ FK
Sbjct: 637 LNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRGIK 696
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+LVAT VA+RGLDI I+HVIN+DLP ID+Y+HRIGRTGR GN G ATSF + D
Sbjct: 697 NILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKN- 755
Query: 630 IAKDLVRILEQAGQPVPEF 648
I KDL+ LE+ Q +P +
Sbjct: 756 IFKDLLATLEECNQQIPRW 774
Score = 158 (60.7 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 456
KG +I+VAT GRL DIL++G+I L F+VLDEADRMLDMGF I+ ++ MP
Sbjct: 500 KGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMP 556
Score = 62 (26.9 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 380 DVANRQTLMFSATFPETIQ 398
D+ RQT+MFSATF + IQ
Sbjct: 577 DIIKRQTIMFSATFRKEIQ 595
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 376 (137.4 bits), Expect = 1.6e-66, Sum P(2) = 1.6e-66
Identities = 103/269 (38%), Positives = 147/269 (54%)
Query: 155 YIPKDVDQSEDNLFSS-GIQTGINFSGWENVEVKVSGDNPPRPIESFE--SAGLREILVK 211
Y P+ ++ N+ S G+ + S VE+ IE+F+ S L E+L+
Sbjct: 318 YYPEKEEEIYSNVKSEKGVNFDLYNS--IPVEISGFNSENVAAIETFDDPSLNLNELLLS 375
Query: 212 NLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL--ESP----- 264
N+KK NY K TPIQKY++ + DL+G AQTGSGKTA +L+PI++H+L + P
Sbjct: 376 NIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYY 435
Query: 265 --GELVTGY-----CAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHF 317
+ Y C P +I APTREL +QI A K+ + + +K + YGG +
Sbjct: 436 EQNNKTSNYYFNRVCL-PICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQ 494
Query: 318 NRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
L+KG +I+VAT GRL DIL++G+I L F+VLDEADRMLDMGF I+ ++
Sbjct: 495 LSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYD 554
Query: 378 MPDVANRQTLMFSATFPETIQKKGCNILV 406
MP N + S E KK CN ++
Sbjct: 555 MP--GNDNDVHTSENKVE--YKKYCNDII 579
Score = 370 (135.3 bits), Expect = 1.6e-66, Sum P(2) = 1.6e-66
Identities = 84/199 (42%), Positives = 114/199 (57%)
Query: 457 DVANRQTLMFSATFPETIQ---KNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXX 509
D+ RQT+MFSATF + IQ K Y+ F+ VG +G + + Q ++ V
Sbjct: 577 DIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYL 636
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
+ I+FV T R AD I +L ++ IHG + Q +RE+A+ FK
Sbjct: 637 LNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRGIK 696
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+LVAT VA+RGLDI I+HVIN+DLP ID+Y+HRIGRTGR GN G ATSF + D
Sbjct: 697 NILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKN- 755
Query: 630 IAKDLVRILEQAGQPVPEF 648
I KDL+ LE+ Q +P +
Sbjct: 756 IFKDLLATLEECNQQIPRW 774
Score = 158 (60.7 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 456
KG +I+VAT GRL DIL++G+I L F+VLDEADRMLDMGF I+ ++ MP
Sbjct: 500 KGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMP 556
Score = 62 (26.9 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 380 DVANRQTLMFSATFPETIQ 398
D+ RQT+MFSATF + IQ
Sbjct: 577 DIIKRQTIMFSATFRKEIQ 595
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 139/278 (50%), Positives = 189/278 (67%)
Query: 384 RQTLMFSAT-FPETIQK--KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 440
R +++ T F ++++ +GCNIL AT GRL DI+ + +I L V+++VLDEADRMLDM
Sbjct: 368 RAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDM 427
Query: 441 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTD 492
GF +++ ++ MP RQTL+FSATFPE IQ+ +Y+F+AVG +GGA D
Sbjct: 428 GFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRD 487
Query: 493 VVQTILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSR 552
V QTIL+V ++ +VFV T + ADFIA +LC+ +I+TTSIHG R
Sbjct: 488 VQQTILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDR 547
Query: 553 LQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRV 612
Q +REQA+ DF+ K VLVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR
Sbjct: 548 EQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRC 607
Query: 613 GNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
GN GRA SF+D D D +A+ LV++L A Q VP +L+
Sbjct: 608 GNTGRAISFFDTDSDNHLAQPLVKVLSDAQQDVPAWLE 645
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 121/247 (48%), Positives = 167/247 (67%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 219 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 277
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 278 KAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRD-GITASRFKEL 336
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTREL+ QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 337 QEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATP 396
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L V+++VLDEADRMLDMGF +++ ++ MP RQTL+FSAT
Sbjct: 397 GRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSAT 456
Query: 393 FPETIQK 399
FPE IQ+
Sbjct: 457 FPEEIQR 463
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 136/259 (52%), Positives = 179/259 (69%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL D++ + +I L V+++VLDEADRMLDMGF +++ ++ MP
Sbjct: 416 QGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 475
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE IQ+ NY+F+AVG +GGA DV QTIL+V
Sbjct: 476 QRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVE 535
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
++ +VFV T + ADFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K V
Sbjct: 536 ILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPV 595
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR GN GRA SF+D + D +A
Sbjct: 596 LVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLA 655
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ LV++L A Q VP +L+
Sbjct: 656 QPLVKVLSDAQQDVPAWLE 674
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 121/247 (48%), Positives = 167/247 (67%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG +PP I +FE A L + L N+
Sbjct: 248 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIA 306
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 307 KAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRD-GITASRFKEL 365
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTREL+ QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 366 QEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATP 425
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL D++ + +I L V+++VLDEADRMLDMGF +++ ++ MP RQTLMFSAT
Sbjct: 426 GRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 485
Query: 393 FPETIQK 399
FPE IQ+
Sbjct: 486 FPEEIQR 492
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 136/259 (52%), Positives = 179/259 (69%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL D++ + +I L V+++VLDEADRMLDMGF +++ ++ MP
Sbjct: 416 QGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 475
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE IQ+ NY+F+AVG +GGA DV QTIL+V
Sbjct: 476 QRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVE 535
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
++ +VFV T + ADFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K V
Sbjct: 536 ILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPV 595
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR GN GRA SF+D + D +A
Sbjct: 596 LVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLA 655
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ LV++L A Q VP +L+
Sbjct: 656 QPLVKVLSDAQQDVPAWLE 674
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 121/247 (48%), Positives = 167/247 (67%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG +PP I +FE A L + L N+
Sbjct: 248 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIA 306
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 307 KAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRD-GITASRFKEL 365
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTREL+ QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 366 QEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATP 425
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL D++ + +I L V+++VLDEADRMLDMGF +++ ++ MP RQTLMFSAT
Sbjct: 426 GRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 485
Query: 393 FPETIQK 399
FPE IQ+
Sbjct: 486 FPEEIQR 492
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 139/278 (50%), Positives = 189/278 (67%)
Query: 384 RQTLMFSAT-FPETIQK--KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 440
R +++ T F +I++ +GCNIL AT GRL DI+ + +I L V+++VLDEADRMLDM
Sbjct: 369 RAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDM 428
Query: 441 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTD 492
GF +++ ++ MP RQTL+FSATFPE IQ+ NY+F+AVG +GGA D
Sbjct: 429 GFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRD 488
Query: 493 VVQTILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSR 552
V Q+IL+V ++ +VFV T + ADFIA +LC+ +I+TTSIHG R
Sbjct: 489 VQQSILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDR 548
Query: 553 LQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRV 612
Q +REQA+ DF+ K VLVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR
Sbjct: 549 EQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRC 608
Query: 613 GNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
GN GRA SF+D + D +A+ LV++L A Q VP +L+
Sbjct: 609 GNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVPAWLE 646
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 121/247 (48%), Positives = 167/247 (67%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 220 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 278
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 279 KAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRD-GITASRFKEL 337
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTREL+ QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 338 QEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATP 397
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L V+++VLDEADRMLDMGF +++ ++ MP RQTL+FSAT
Sbjct: 398 GRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSAT 457
Query: 393 FPETIQK 399
FPE IQ+
Sbjct: 458 FPEEIQR 464
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 135/259 (52%), Positives = 179/259 (69%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP
Sbjct: 415 QGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 474
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE IQ+ NY+F+AVG +GGA DV QT+L+V
Sbjct: 475 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVE 534
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
++ +VFV T + ADFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K V
Sbjct: 535 ILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPV 594
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR GN GRA SF+D + D +A
Sbjct: 595 LVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLA 654
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ LV++L A Q VP +L+
Sbjct: 655 QPLVKVLTDAQQDVPAWLE 673
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 124/255 (48%), Positives = 169/255 (66%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGI+F ++ + V+VSG + P I +FE A L + L N+
Sbjct: 247 YIPPPPPEDEDSIFAH-YQTGISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 305
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYC-- 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G +T C
Sbjct: 306 KAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHD-G--ITASCFK 362
Query: 273 --AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
+PE II APTRELV QI+ A K+++ + ++ + YGG H RQ+ +GCNIL A
Sbjct: 363 ELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCA 422
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP RQTLMFS
Sbjct: 423 TPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFS 482
Query: 391 ATFPETIQKKGCNIL 405
ATFPE IQ+ L
Sbjct: 483 ATFPEEIQRLAAEFL 497
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 135/259 (52%), Positives = 179/259 (69%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP
Sbjct: 394 QGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 453
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE IQ+ NY+F+AVG +GGA DV QT+L+V
Sbjct: 454 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVE 513
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
++ +VFV T + ADFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K V
Sbjct: 514 ILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPV 573
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR GN GRA SF+D + D +A
Sbjct: 574 LVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLA 633
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ LV++L A Q VP +L+
Sbjct: 634 QPLVKVLTDAQQDVPAWLE 652
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 123/253 (48%), Positives = 168/253 (66%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 226 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 284
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 285 KAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHD-GITASRFKEL 343
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTRELV QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 344 QEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATP 403
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP RQTLMFSAT
Sbjct: 404 GRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 463
Query: 393 FPETIQKKGCNIL 405
FPE IQ+ L
Sbjct: 464 FPEEIQRLAAEFL 476
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 135/259 (52%), Positives = 179/259 (69%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP
Sbjct: 414 QGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 473
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE IQ+ NY+F+AVG +GGA DV QT+L+V
Sbjct: 474 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVE 533
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
++ +VFV T + ADFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K V
Sbjct: 534 ILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPV 593
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR GN GRA SF+D + D +A
Sbjct: 594 LVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLA 653
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ LV++L A Q VP +L+
Sbjct: 654 QPLVKVLTDAQQDVPAWLE 672
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 123/253 (48%), Positives = 168/253 (66%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 246 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 304
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 305 KAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHD-GITASRFKEL 363
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTRELV QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 364 QEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATP 423
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP RQTLMFSAT
Sbjct: 424 GRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 483
Query: 393 FPETIQKKGCNIL 405
FPE IQ+ L
Sbjct: 484 FPEEIQRLAAEFL 496
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 138/278 (49%), Positives = 189/278 (67%)
Query: 384 RQTLMFSAT-FPETIQK--KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 440
R +++ T F +I++ +GCNIL AT GRL DI+ + +I L V+++VLDEADRMLDM
Sbjct: 380 RAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDM 439
Query: 441 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTD 492
GF +++ ++ MP RQTL+FSATFPE IQ+ NY+F+AVG +GGA D
Sbjct: 440 GFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRD 499
Query: 493 VVQTILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSR 552
V Q+IL+V ++ +VFV T + ADFIA +LC+ +I+TTSIHG R
Sbjct: 500 VQQSILQVGPVFKKRKLVEILRNIGDERPMVFVETKKKADFIATFLCQEKISTTSIHGDR 559
Query: 553 LQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRV 612
Q +REQA+ DF+ K VLVAT+VA+RGLDI+ ++HVIN++LP IDEYVHRIGRTGR
Sbjct: 560 EQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVHRIGRTGRC 619
Query: 613 GNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
GN GRA SF+D + D +A+ LV++L A Q VP +L+
Sbjct: 620 GNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVPAWLE 657
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 121/247 (48%), Positives = 167/247 (67%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 231 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 289
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 290 KAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRD-GITASRFKEL 348
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTREL+ QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 349 QEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATP 408
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L V+++VLDEADRMLDMGF +++ ++ MP RQTL+FSAT
Sbjct: 409 GRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSAT 468
Query: 393 FPETIQK 399
FPE IQ+
Sbjct: 469 FPEEIQR 475
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 138/278 (49%), Positives = 189/278 (67%)
Query: 384 RQTLMFSAT-FPETIQK--KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 440
R +++ T F +I++ +GCNIL AT GRL DI+ + +I L V+++VLDEADRMLDM
Sbjct: 380 RAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDM 439
Query: 441 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTD 492
GF +++ ++ MP RQTL+FSATFPE IQ+ NY+F+AVG +GGA D
Sbjct: 440 GFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRD 499
Query: 493 VVQTILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSR 552
V Q+IL+V ++ +VFV T + ADFIA +LC+ +I+TTSIHG R
Sbjct: 500 VQQSILQVGPVFKKRKLVEILRNIGDERPMVFVETKKKADFIATFLCQEKISTTSIHGDR 559
Query: 553 LQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRV 612
Q +REQA+ DF+ K VLVAT+VA+RGLDI+ ++HVIN++LP IDEYVHRIGRTGR
Sbjct: 560 EQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVHRIGRTGRC 619
Query: 613 GNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
GN GRA SF+D + D +A+ LV++L A Q VP +L+
Sbjct: 620 GNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVPAWLE 657
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 121/247 (48%), Positives = 167/247 (67%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 231 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 289
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 290 KAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRD-GITASRFKEL 348
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTREL+ QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 349 QEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATP 408
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L V+++VLDEADRMLDMGF +++ ++ MP RQTL+FSAT
Sbjct: 409 GRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSAT 468
Query: 393 FPETIQK 399
FPE IQ+
Sbjct: 469 FPEEIQR 475
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 134/259 (51%), Positives = 177/259 (68%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP
Sbjct: 412 QGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 471
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE IQ+ NY+F+AVG +GGA DV Q L+V
Sbjct: 472 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLE 531
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
++ +VFV T + ADFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K V
Sbjct: 532 ILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPV 591
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR GN GRA SF+D + D +A
Sbjct: 592 LVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLA 651
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ LV++L A Q VP +L+
Sbjct: 652 QPLVKVLTDAQQDVPAWLE 670
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 135/323 (41%), Positives = 198/323 (61%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 244 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 302
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 303 KAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHD-GITASRFKEL 361
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTRELV QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 362 QEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATP 421
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP RQTLMFSAT
Sbjct: 422 GRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 481
Query: 393 FPETIQKKGC-----NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQ 447
FPE IQ+ N L +G++ R + A ++ + +++L++ ++
Sbjct: 482 FPEEIQRLAAEFLKSNYLFVAVGQVGGAC-RD-VQQADLQVGQYSKREKLLEI-----LR 534
Query: 448 HVMQHSTMPDVANRQTLMFSATF 470
++ TM V ++ F ATF
Sbjct: 535 NIGDERTMVFVETKKKADFIATF 557
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 127/259 (49%), Positives = 179/259 (69%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+++G+ISL V+++VLDEADRMLDMGF D++ ++ + MP
Sbjct: 293 QGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKD 352
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE +Q+ +YIF+ +G GA +DV Q IL+VP
Sbjct: 353 RRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIE 412
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ +VFV T + AD++A +LC+ + +TSIHG R Q +RE A+ DF++ K ++
Sbjct: 413 ILQSTGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQI 472
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VASRGLDI+ ++HVIN+DLP I++YVHRIGRTGR GN G+A SF+D DG +
Sbjct: 473 LVATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLV 532
Query: 632 KDLVRILEQAGQPVPEFLK 650
+ L+++L +A Q VP +L+
Sbjct: 533 QSLLKVLSEAQQEVPVWLE 551
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 118/247 (47%), Positives = 169/247 (68%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
Y+P + E ++F+ Q+GINF ++ V++SG +PP P+ +FE A + L KN+
Sbjct: 125 YVPPPPPEDEQSIFAC-YQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNIS 183
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQ 274
K+ Y+K TP+QK++IP GRDLM CAQTGSGKTAAFL+PI+ +++ G + + Q
Sbjct: 184 KTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKD-GVTASAFQKQ 242
Query: 275 --PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
P+ II APTREL+ QI A K+ Y + ++ + YGG + H RQ+ +GCNIL AT
Sbjct: 243 QEPQCIIVAPTRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATP 302
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+++G+ISL V+++VLDEADRMLDMGF D++ ++ + MP RQTLMFSAT
Sbjct: 303 GRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSAT 362
Query: 393 FPETIQK 399
FPE +Q+
Sbjct: 363 FPEEVQR 369
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 128/257 (49%), Positives = 172/257 (66%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GC++LVAT GRLKD+LDRG++SLA++R++VLDEADRMLDMGF I+++++ MP V
Sbjct: 318 RGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVK 377
Query: 460 NRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
+RQTLMFSATFP IQ K+Y+F++VG +G S ++ Q IL V
Sbjct: 378 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDL 437
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
+ IVF T R AD +A YL + T+IHG R Q +RE+A+ FK +L
Sbjct: 438 LSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPIL 497
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAK 632
VATAVA+RGLDI + HVINYDLP +ID+YVHRIGRTGR GN G AT+F++ + + K
Sbjct: 498 VATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVV-K 556
Query: 633 DLVRILEQAGQPVPEFL 649
L+ +L +A Q VP+FL
Sbjct: 557 GLIELLSEANQEVPDFL 573
Score = 607 (218.7 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 118/243 (48%), Positives = 171/243 (70%)
Query: 163 SEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPT 222
++D+ F S +GINF ++++ V+ SGD P PI SF + L E+LV+N++ S +TKPT
Sbjct: 154 ADDSHFQS---SGINFDNYDDIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPT 210
Query: 223 PIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH-LLESPGEL------VTGYCAQP 275
P+QKY++P GRDLM CAQTGSGKT FL P++ ++ P + + + P
Sbjct: 211 PVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYP 270
Query: 276 EVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRL 335
+++ APTRELV QI+E + K++Y S ++ C+ YGGA R +++GC++LVAT GRL
Sbjct: 271 TILVMAPTRELVSQIYEESKKFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRL 330
Query: 336 KDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
KD+LDRG++SLA++R++VLDEADRMLDMGF I+++++ MP V +RQTLMFSATFP
Sbjct: 331 KDLLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPR 390
Query: 396 TIQ 398
IQ
Sbjct: 391 DIQ 393
Score = 54 (24.1 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 553 LQSQREQAIHDF-KTKKM-KVLVATAVASRGLD--IKGIRHVINYDLPQEIDEYVHRIGR 608
L S + +H +T + V +ATA +R +KG+ +++ + QE+ +++ +I R
Sbjct: 520 LPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIELLS-EANQEVPDFLTKIAR 578
Query: 609 TGRVGNK----GRATSFYDPDQD 627
G G GR S P +D
Sbjct: 579 EGAFGKMTRGGGRGGSSRGPSRD 601
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 129/261 (49%), Positives = 178/261 (68%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL D++ + +I L +R++VLDEADRMLDMGF DI+++++ S MP
Sbjct: 412 EGCNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKE 471
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFP +IQ +Y+F+ VG +GGA +DV Q ++EV
Sbjct: 472 ERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVEQMVIEVDEFGKKDKLME 531
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ +VFV T + ADFIA +LC+ ++ +TSIHG R Q +RE A+ DF+T + V
Sbjct: 532 ILQEIGSERTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPV 591
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDP--DQDGA 629
+VAT+VA+RGLDI+ + +VIN+D+P +IDEYVHRIGRTGR GN GRA SF+D D +
Sbjct: 592 IVATSVAARGLDIENVSYVINFDIPDDIDEYVHRIGRTGRCGNTGRAISFFDKRGDDEQR 651
Query: 630 IAKDLVRILEQAGQPVPEFLK 650
IA+ LV++L A Q VP +L+
Sbjct: 652 IARSLVKVLSDAHQEVPAWLE 672
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 140/318 (44%), Positives = 193/318 (60%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP E ++F QTGINF ++++ V+VSG + P I +FE A L + L KN+
Sbjct: 244 YIPPPPPAEESDIFKH-YQTGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVC 302
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCA- 273
KS Y K TPIQK++IP + GRDLM CAQTGSGKTAAFL+PI+ HL+ E
Sbjct: 303 KSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLMVKGVESSAFQTLK 362
Query: 274 QPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMG 333
+PE II APTREL+ QI+ A K++Y + ++ + YGG H +Q+ +GCNIL AT G
Sbjct: 363 EPEAIIVAPTRELINQIYLDARKFSYGTCVRPVVIYGGTQMFHSLKQISEGCNILCATPG 422
Query: 334 RLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATF 393
RL D++ + +I L +R++VLDEADRMLDMGF DI+++++ S MP RQTLMFSATF
Sbjct: 423 RLLDVIRKEKIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKEERQTLMFSATF 482
Query: 394 PETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDI-QHVMQH 452
P +IQ IL L ++ + + + V +V+ E D L +I Q +
Sbjct: 483 PSSIQSLAREILKPDY--LFVVVGQVGGACSDVEQMVI-EVDEFGKKDKLMEILQEIGSE 539
Query: 453 STMPDVANRQTLMFSATF 470
TM V ++ F ATF
Sbjct: 540 RTMVFVKTKKKADFIATF 557
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 123/250 (49%), Positives = 173/250 (69%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+++G+ISL V+++VLDEADRMLDMGF D++ ++ + MP
Sbjct: 293 QGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKD 352
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFPE +Q+ +YIF+ +G GA +DV Q IL+VP
Sbjct: 353 RRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIE 412
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ +VFV T + AD++A +LC+ + +TSIHG R Q +RE A+ DF++ K ++
Sbjct: 413 ILQSTGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQI 472
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT+VASRGLDI+ ++HVIN+DLP I++YVHRIGRTGR GN G+A SF+D DG +
Sbjct: 473 LVATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLV 532
Query: 632 KDLVRILEQA 641
+ L+++L +A
Sbjct: 533 QSLLKVLSEA 542
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 118/247 (47%), Positives = 169/247 (68%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
Y+P + E ++F+ Q+GINF ++ V++SG +PP P+ +FE A + L KN+
Sbjct: 125 YVPPPPPEDEQSIFAC-YQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNIS 183
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQ 274
K+ Y+K TP+QK++IP GRDLM CAQTGSGKTAAFL+PI+ +++ G + + Q
Sbjct: 184 KTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKD-GVTASAFQKQ 242
Query: 275 --PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
P+ II APTREL+ QI A K+ Y + ++ + YGG + H RQ+ +GCNIL AT
Sbjct: 243 QEPQCIIVAPTRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATP 302
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+++G+ISL V+++VLDEADRMLDMGF D++ ++ + MP RQTLMFSAT
Sbjct: 303 GRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSAT 362
Query: 393 FPETIQK 399
FPE +Q+
Sbjct: 363 FPEEVQR 369
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 130/257 (50%), Positives = 172/257 (66%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+ + +I L +R++VLDEADRMLDMGF +++ ++ MP
Sbjct: 392 QGCNILCATPGRLMDIIGKEKIGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGMPSKE 451
Query: 460 NRQTLMFSATFPETIQKNYI----------FIAVGIIGGASTDVVQTILEVPXXXXXXXX 509
RQTLMFSATFP K++ +AVG +GGA +DV QT+L+V
Sbjct: 452 QRQTLMFSATFPRGNFKDWAGEFLKNLTICLVAVGQVGGACSDVQQTVLQVGQYSKREKL 511
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
E+ +VFV T + ADFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K
Sbjct: 512 VEILRNIGEERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 571
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT+VA+RGLDI+ ++HVIN+DLP IDEYVHRIGRTGR GN G+A SF+DP+ D
Sbjct: 572 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGKAISFFDPEPDSH 631
Query: 630 IAKDLVRILEQAGQPVP 646
+A+ LV++L A Q P
Sbjct: 632 LAQPLVKVLSDAQQGCP 648
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 117/242 (48%), Positives = 159/242 (65%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP ++E+ F+ QTGINF ++ + V+VSG + P I +FE L + L ++
Sbjct: 224 YIPPPPPENEEATFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEETDLCQTLNNDIT 282
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQ 274
K+ YTK TP+QKY IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + + Q
Sbjct: 283 KAGYTKLTPVQKYGIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRD-GVTASRFKDQ 341
Query: 275 --PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
PE II APTREL+ QI A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 342 QEPECIIVAPTRELINQIFLEARKFSFGTCVRPVVIYGGTQLGHSIRQIMQGCNILCATP 401
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L +R++VLDEADRMLDMGF +++ ++ MP RQTLMFSAT
Sbjct: 402 GRLMDIIGKEKIGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSAT 461
Query: 393 FP 394
FP
Sbjct: 462 FP 463
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 125/258 (48%), Positives = 175/258 (67%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GC++L AT GRL D++DRGRISLA+++F+VLDEADRMLDMGF I+H+++ + M V
Sbjct: 304 QGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVE 363
Query: 460 NRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQTLMFSATFP IQ K+Y+F++VG +G S ++ Q ++ V
Sbjct: 364 ERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDI 423
Query: 513 XXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+G+ ++FV T R AD + YL + TSIHG R Q +RE+A+ F++ + +
Sbjct: 424 LHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSI 483
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
+VATAVASRGLDI + HVINYDLP +ID+YVHRIGRTGR GN G+A +F++ + G IA
Sbjct: 484 MVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKG-IA 542
Query: 632 KDLVRILEQAGQPVPEFL 649
K+L+ +L++A Q P FL
Sbjct: 543 KELIELLQEANQECPSFL 560
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 120/237 (50%), Positives = 158/237 (66%)
Query: 172 IQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPA 231
+ TGINF ++++ V+VSG + P+ F S L L++N+K S YT+PTP+QK +IP
Sbjct: 144 VSTGINFEKYDDIPVEVSGGDI-EPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPI 202
Query: 232 GLEGRDLMGCAQTGSGKTAAFLIPIMHHLLES-PGELVT------GYC---AQPEVIICA 281
GRDLM CAQTGSGKTA FL PI+ + P + GY A P +I A
Sbjct: 203 VTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILA 262
Query: 282 PTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDR 341
PTRELV QIHE + K+ Y S ++ C YGGA RQ+++GC++L AT GRL D++DR
Sbjct: 263 PTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDR 322
Query: 342 GRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
GRISLA+++F+VLDEADRMLDMGF I+H+++ + M V RQTLMFSATFP IQ
Sbjct: 323 GRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQ 379
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 378 (138.1 bits), Expect = 2.2e-61, Sum P(2) = 2.2e-61
Identities = 87/231 (37%), Positives = 129/231 (55%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G PRP+ S+E + L L+K ++++ Y KP+PIQ AIP GL+ RD++G
Sbjct: 297 EDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGI 356
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS 301
A+TGSGKTAAF++P++ ++ P P ++ APTREL QI E K+A+
Sbjct: 357 AETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYL 416
Query: 302 VLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRML 361
++ GG S ++ +GC I++AT GRL D L+R L +VVLDEADRM+
Sbjct: 417 GFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 476
Query: 362 DMGF---LGDIQHVMQHSTM-PDVAN---------RQTLMFSATFPETIQK 399
DMGF + + M S + P+ R T MFSAT P +++
Sbjct: 477 DMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVER 527
Score = 313 (115.2 bits), Expect = 2.2e-61, Sum P(2) = 2.2e-61
Identities = 74/194 (38%), Positives = 105/194 (54%)
Query: 461 RQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVV-QTILEVPXXXXXXXXXXX 512
R T MFSAT P +++ N + + +G G +TD++ Q ++ +
Sbjct: 512 RTTYMFSATMPPGVERLARKYLRNPVVVTIGT-AGKTTDLISQHVIMMKESEKFFRLQKL 570
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
E IVFV+T +N D IA L + T++HG + Q QRE ++ F+ K+ VL
Sbjct: 571 LDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVL 630
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAK 632
VAT V RG+DI + HVINYD+P+ I+ Y HRIGRTGR G G ATSF D +
Sbjct: 631 VATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTL-HDTEVFY 689
Query: 633 DLVRILEQAGQPVP 646
DL ++L Q+ VP
Sbjct: 690 DLKQMLVQSNSAVP 703
Score = 134 (52.2 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 36/90 (40%), Positives = 49/90 (54%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGF---LGDIQHVMQHSTM- 455
+GC I++AT GRL D L+R L +VVLDEADRM+DMGF + + M S +
Sbjct: 438 QGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLK 497
Query: 456 PDVAN---------RQTLMFSATFPETIQK 476
P+ R T MFSAT P +++
Sbjct: 498 PENEEEELDEKKIYRTTYMFSATMPPGVER 527
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 128/257 (49%), Positives = 169/257 (65%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GC++LVAT GRL D+L+RG++SLA+++++VLDEADRMLDMGF I+H+++ MP V
Sbjct: 286 RGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVE 345
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
NRQTLMFSATFP IQ NYIF++VG +G S ++ Q IL V
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
+ ++FV T R AD + +L T+IHG R Q++RE+A+ FK +L
Sbjct: 406 LSAEHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADIL 465
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAK 632
VATAVA+RGLDI + HVINYDLP +ID+YVHRIGRTGR GN G ATSF++ + I K
Sbjct: 466 VATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQN-IVK 524
Query: 633 DLVRILEQAGQPVPEFL 649
L+ IL +A Q VP FL
Sbjct: 525 GLMEILNEANQEVPTFL 541
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 116/232 (50%), Positives = 161/232 (69%)
Query: 174 TGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGL 233
+GI F ++N+ V SG + P PI F S L E+L++N+K +++TKPTP+QKY+IP
Sbjct: 130 SGIKFDNYDNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVT 189
Query: 234 EGRDLMGCAQTGSGKTAAFLIPIMHHLLES-----PGELVTGYCAQ--PEVIICAPTREL 286
+GRDLM CAQTGSGKT FL P+ L S P + + Y + P ++ APTREL
Sbjct: 190 KGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTREL 249
Query: 287 VMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISL 346
QI E A K+ Y S ++ C+ YGGA + R++++GC++LVAT GRL D+L+RG++SL
Sbjct: 250 ATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSL 309
Query: 347 ASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
A+++++VLDEADRMLDMGF I+H+++ MP V NRQTLMFSATFP IQ
Sbjct: 310 ANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQ 361
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 386 (140.9 bits), Expect = 2.2e-60, Sum P(3) = 2.2e-60
Identities = 84/200 (42%), Positives = 120/200 (60%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + + G PRP+ ++E AG + + + +K+ Y +PTPIQ+ AIP GL+ RD++G
Sbjct: 285 EDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKTAAFL+P++ + P E P II APTREL QI E K+
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKL 404
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
+K GGAS +L G +++AT GRL D+L+ + L +V+LDEADRM
Sbjct: 405 LGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRM 464
Query: 361 LDMGFLGDIQHVMQHSTMPD 380
LDMGF D+Q V+++ MPD
Sbjct: 465 LDMGFEPDVQKVLEY--MPD 482
Score = 281 (104.0 bits), Expect = 2.2e-60, Sum P(3) = 2.2e-60
Identities = 65/188 (34%), Positives = 101/188 (53%)
Query: 461 RQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
RQT+MF+AT I++ Y+ + +G G + V Q + VP
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVL 568
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
+ +I+FV+ + AD ++ L + T +HG + Q QRE A+ K +LV
Sbjct: 569 ESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILV 628
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA RG+D+K + V+NYD+ + I++Y HRIGRTGR G G+A +F PD D A+ D
Sbjct: 629 ATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPD-DTAVYFD 687
Query: 634 LVRILEQA 641
L ++L ++
Sbjct: 688 LKQVLVES 695
Score = 141 (54.7 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPD 457
+ G +++AT GRL D+L+ + L +V+LDEADRMLDMGF D+Q V+++ MPD
Sbjct: 426 RMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEY--MPD 482
Score = 44 (20.5 bits), Expect = 2.2e-60, Sum P(3) = 2.2e-60
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 384 RQTLMFSATFPETIQK 399
RQT+MF+AT I++
Sbjct: 509 RQTVMFTATMSSAIER 524
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 125/260 (48%), Positives = 176/260 (67%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 362 ERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 421
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+RQT+MFSATFP+ IQ + YIF+AVG +G S ++ Q ++ V
Sbjct: 422 GSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLD 481
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ +
Sbjct: 482 LLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCP 541
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
++VATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSFY+ D++ I
Sbjct: 542 IMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYN-DKNSNI 600
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ IL +A Q VP +L+
Sbjct: 601 TKDLLDILVEAKQEVPSWLE 620
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 120/253 (47%), Positives = 166/253 (65%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS+ TGINF ++++ V+ +G N P IESF + EI++ N+ S YT+
Sbjct: 187 ERLEHELFSAS-NTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTR 245
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVTGYCAQ----- 274
PTP+QKYAIP RDLM CAQTGSGKTAAFL+P++ + E PGE + A
Sbjct: 246 PTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQEN 305
Query: 275 ---------PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGC 325
P ++ APTREL +QI++ A K+AY S ++ C+ YGGA R LE+GC
Sbjct: 306 GKYVRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGC 365
Query: 326 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 385
++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP +RQ
Sbjct: 366 HLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQ 425
Query: 386 TLMFSATFPETIQ 398
T+MFSATFP+ IQ
Sbjct: 426 TMMFSATFPKEIQ 438
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 126/260 (48%), Positives = 176/260 (67%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L ++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 346 ERGCHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 405
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQT+MFSATFP+ IQ ++YIF+AVG +G S ++ Q ++ V
Sbjct: 406 GLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLD 465
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ +
Sbjct: 466 LLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCP 525
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ D++G I
Sbjct: 526 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-DKNGNI 584
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ IL +A Q VP +L+
Sbjct: 585 TKDLLDILVEAKQEVPSWLE 604
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 118/252 (46%), Positives = 166/252 (65%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G N P+PI+ F + EI++ N+ S YT+
Sbjct: 172 ERLEHELFS-GSNTGINFEKYDDIPVEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTR 230
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVTGY--CAQ--- 274
PTP+QK+AIP RDLM CAQTGSGKTAAFL+P++ + + PGE + AQ
Sbjct: 231 PTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEALQAAKNSAQENG 290
Query: 275 --------PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCN 326
P ++ APTREL +QI++ A K++Y S ++ C+ YGGA R LE+GC+
Sbjct: 291 KYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCH 350
Query: 327 ILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQT 386
+LVAT GRL D+++RG+I L ++VLDEADRMLDMGF I+ +++ TMP RQT
Sbjct: 351 LLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQT 410
Query: 387 LMFSATFPETIQ 398
+MFSATFP+ IQ
Sbjct: 411 MMFSATFPKEIQ 422
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 406 (148.0 bits), Expect = 3.4e-59, Sum P(2) = 3.4e-59
Identities = 106/260 (40%), Positives = 152/260 (58%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
+ +E+KV G + PRPI+ + GL ++ LKK NY KP PIQ A+P + GRD +G
Sbjct: 380 KELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGV 439
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKT F++P++ H+ + P E G P ++ APTRELV QI+ K++ +
Sbjct: 440 AKTGSGKTLGFVLPMLRHIKDQPPVEAGDG----PIGLVMAPTRELVQQIYSDIRKFSKA 495
Query: 301 SVLKICLH-YGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDE 356
+ IC+ YGG+ +L++G I+V T GR+ DIL G+I+ L V ++V+DE
Sbjct: 496 LGI-ICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDE 554
Query: 357 ADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFP---ETIQKKGCN--ILVATMGR 411
ADRM DMGF I ++Q+ PD RQT++FSATFP ET+ +K N + + GR
Sbjct: 555 ADRMFDMGFEPQITRIVQN-IRPD---RQTVLFSATFPRQVETLARKVLNKPVEIQVGGR 610
Query: 412 L---KDILDRGRISLASVRF 428
KDI I S RF
Sbjct: 611 SVVNKDITQLVEIRPESERF 630
Score = 240 (89.5 bits), Expect = 3.4e-59, Sum P(2) = 3.4e-59
Identities = 48/98 (48%), Positives = 69/98 (70%)
Query: 553 LQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRV 612
++SQ E++I DFK+ +L+AT+VA+RGLD+K + V+N+D P ++YVHR+GRTGR
Sbjct: 650 VRSQ-EKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRA 708
Query: 613 GNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
G KG A +F D D A DLV+ LE + QPVP+ +K
Sbjct: 709 GRKGCAVTFISED-DAKYAPDLVKALELSEQPVPDDVK 745
Score = 175 (66.7 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 60/161 (37%), Positives = 85/161 (52%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ DIL G+I+ L V ++V+DEADRM DMGF I ++Q+
Sbjct: 517 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQN-IR 575
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAST---DVVQTILEVPXXXXXXX 508
PD RQT++FSATFP ET+ + + V I +GG S D+ Q + P
Sbjct: 576 PD---RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERFSR 632
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNA--DFIACYLCETEIATT 546
E G V+VFV + + DF + +C IAT+
Sbjct: 633 LLELLGEWYEKGKVLVFVRSQEKSISDFKSD-VCNLLIATS 672
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 125/259 (48%), Positives = 169/259 (65%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+L+RG+ISLA+V+++VLDEADRMLDMGF I+H+++ M V
Sbjct: 273 ERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPV 332
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTLMFSATFP IQ +YIF++VG +G S ++ Q +L V
Sbjct: 333 GERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLD 392
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ ++FV T R AD + +L T+IHG R QS+RE+A+ F++ +
Sbjct: 393 LLSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATL 452
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVATAVA+RGLDI + HVINYDLP ++D+YVHRIGRTGR GN G AT+F++ + I
Sbjct: 453 LVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSN-IV 511
Query: 632 KDLVRILEQAGQPVPEFLK 650
K L IL +A Q VP FLK
Sbjct: 512 KGLHEILTEANQEVPSFLK 530
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 120/242 (49%), Positives = 161/242 (66%)
Query: 164 EDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTP 223
ED F S +GINF ++++ V SG + P PI F S L +L++N+K + +TKPTP
Sbjct: 111 EDPNFQS---SGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTP 167
Query: 224 IQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLE---SPGELVTG--YC--AQPE 276
+QKY++P GRDLM CAQTGSGKT FL P++ + SP G Y A P
Sbjct: 168 VQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPT 227
Query: 277 VIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLK 336
+I APTREL QI + A K+ Y S +K C+ YGG+ + R++E+GC++LVAT GRL
Sbjct: 228 AVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLN 287
Query: 337 DILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPET 396
D+L+RG+ISLA+V+++VLDEADRMLDMGF I+H+++ M V RQTLMFSATFP
Sbjct: 288 DLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPAD 347
Query: 397 IQ 398
IQ
Sbjct: 348 IQ 349
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 120/260 (46%), Positives = 175/260 (67%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RGRISL ++++++LDEADRMLDMGF I+ +++ MP+V
Sbjct: 319 ERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNV 378
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+RQTLMFSATFP IQ K+Y+F++VG +G S ++ Q + V
Sbjct: 379 NDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLD 438
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
G+ ++FV T R AD ++ +L T+IHG R Q +RE+A+ F++ +
Sbjct: 439 ILHTHGTTGLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYP 498
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI + HVINYDLP +ID+YVHRIGRTGR GN G AT+F++ G +
Sbjct: 499 ILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVV 558
Query: 631 AKDLVRILEQAGQPVPEFLK 650
+DL+ +L++A Q VP FL+
Sbjct: 559 -RDLIDLLKEAHQEVPSFLE 577
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 113/234 (48%), Positives = 158/234 (67%)
Query: 174 TGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGL 233
TGINF+ ++++ V+ SG + P P+ +F + L + L+ N+ + Y PTP+QKY+IP +
Sbjct: 162 TGINFANYDDIPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVM 221
Query: 234 EGRDLMGCAQTGSGKTAAFLIPIMHHLLES----PGELVTGYC-----AQPEVIICAPTR 284
GRDLM CAQTGSGKT FL PI+ ++ P G A P +I APTR
Sbjct: 222 NGRDLMACAQTGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTR 281
Query: 285 ELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRI 344
ELV QI + A K+AY S ++ C+ YGGA RQ+E+GC++LVAT GRL D+++RGRI
Sbjct: 282 ELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRI 341
Query: 345 SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
SL ++++++LDEADRMLDMGF I+ +++ MP+V +RQTLMFSATFP IQ
Sbjct: 342 SLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQ 395
>UNIPROTKB|I3LRT7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
Length = 290
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 125/239 (52%), Positives = 164/239 (68%)
Query: 420 RISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK--- 476
+I L V+++VLDEADRMLDMGF +++ ++ MP RQTLMFSATFPE IQ+
Sbjct: 1 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 60
Query: 477 -----NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNA 531
NY+F+AVG +GGA DV QTIL+V ++ +VFV T + A
Sbjct: 61 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNIGDERTMVFVETKKKA 120
Query: 532 DFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVI 591
DFIA +LC+ +I+TTSIHG R Q +REQA+ DF+ K VLVAT+VA+RGLDI+ ++HVI
Sbjct: 121 DFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVI 180
Query: 592 NYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
N+DLP IDEYVHRIGRTGR GN GRA SF+D + D +A+ LV++L A Q VP +L+
Sbjct: 181 NFDLPSTIDEYVHRIGRTGRCGNTGRAISFFD-ESDSHLAQPLVKVLSDAQQDVPAWLE 238
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 343 RISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
+I L V+++VLDEADRMLDMGF +++ ++ MP RQTLMFSATFPE IQ+
Sbjct: 1 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQR 57
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 314 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 373
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 374 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLD 433
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 434 LLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 493
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 494 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNANI 552
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 553 TKDLLDLLVEAKQEVPSWLE 572
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 144 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 202
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 203 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGR 262
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 263 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 322
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 323 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 382
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 383 ATFPKEIQ 390
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 343 (125.8 bits), Expect = 6.4e-58, Sum P(2) = 6.4e-58
Identities = 75/199 (37%), Positives = 114/199 (57%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGL-REILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMG 240
E+ + G P PI +++ + L REIL + +++ Y KP+PIQ +IP L GRD++G
Sbjct: 397 EDFNISTKGGIAPNPIRTWQESNLPREIL-EAIRQLGYEKPSPIQMQSIPISLTGRDILG 455
Query: 241 CAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKT AF+IP++ ++ + P P ++ APTRELV QI + +A
Sbjct: 456 IAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQH 515
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ GG S Q+ KGC I++AT GRL D L++ + L ++VLDEAD M
Sbjct: 516 FGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMM 575
Query: 361 LDMGFLGDIQHVMQHSTMP 379
+D+GF + V+ MP
Sbjct: 576 IDLGFEPQVTSVLD--AMP 592
Score = 326 (119.8 bits), Expect = 6.4e-58, Sum P(2) = 6.4e-58
Identities = 80/202 (39%), Positives = 113/202 (55%)
Query: 461 RQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
R T++FSAT P E + K Y+ I +G G + QT++ V
Sbjct: 616 RTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQL 675
Query: 514 XXXDEDG----VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
+DG +I+FV+ ++ D IA L E ++ T +H R Q QRE A+ FK +K
Sbjct: 676 I---KDGPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKY 732
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+VL+AT VASRG+ + G+ HVIN+D+P+ I++Y HRIGRTGR G+ G A+SF D+D
Sbjct: 733 EVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFIT-DKDVE 791
Query: 630 IAKDLVRILEQAGQPVP-EFLK 650
I DL +IL VP E LK
Sbjct: 792 IMYDLKQILTSTNNIVPIELLK 813
Score = 125 (49.1 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 456
KGC I++AT GRL D L++ + L ++VLDEAD M+D+GF + V+ MP
Sbjct: 538 KGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLD--AMP 592
Score = 55 (24.4 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 384 RQTLMFSATFPETIQKKGCNIL----VATMGRLKDILDRGRISLASVR 427
R T++FSAT P ++K L T+G ++DR R ++ V+
Sbjct: 616 RTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVK 663
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 380 (138.8 bits), Expect = 8.3e-58, Sum P(2) = 8.3e-58
Identities = 91/240 (37%), Positives = 137/240 (57%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + + GD+ P P+ ++E AGL ++K LKK NY +P+ IQ+ AIP L+ +DL+G
Sbjct: 233 EDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGI 292
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS 301
A+TGSGKTAAF+IP++ + + P + P ++ APTREL QI K+A
Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPL 352
Query: 302 VLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRML 361
+ GG + + Q+ +G +I+VAT GRL D L+R L+ +VV+DEADRML
Sbjct: 353 GFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRML 412
Query: 362 DMGFLGDIQHVMQ-----HSTMPD-----VAN-----RQTLMFSATFPETIQKKGCNILV 406
DMGF D+ ++ +++ D AN RQT+MFSAT P + + L+
Sbjct: 413 DMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLI 472
Score = 273 (101.2 bits), Expect = 8.3e-58, Sum P(2) = 8.3e-58
Identities = 68/202 (33%), Positives = 107/202 (52%)
Query: 459 ANRQTLMFSATFPETIQ---KNY----IFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+ RQT+MFSAT P + K+Y + + +G IG A V Q + +
Sbjct: 448 SRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVE 507
Query: 512 XXXXXDEDG--VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
+ +I+FV+ RN + IA L ++HGS+ Q QRE+AI + K
Sbjct: 508 EILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTA 567
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+LVAT +A RG+DI + V+NY++ + I++Y HRIGRTGR G G A +F P+ D
Sbjct: 568 DILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPE-DTD 626
Query: 630 IAKDLVRILEQAGQP-VPEFLK 650
+ DL +L ++ + +P+ L+
Sbjct: 627 VYYDLRVLLSRSAKAHIPDELR 648
Score = 144 (55.7 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 38/90 (42%), Positives = 53/90 (58%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQ-----HST 454
+G +I+VAT GRL D L+R L+ +VV+DEADRMLDMGF D+ ++ +++
Sbjct: 374 QGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNAS 433
Query: 455 MPD-----VAN-----RQTLMFSATFPETI 474
D AN RQT+MFSAT P +
Sbjct: 434 EKDGSILATANSSSSRRQTIMFSATLPPRV 463
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 124/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 313 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 372
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 373 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLD 432
Query: 512 XXXXXDEDGVI-VFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D +I VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 433 LLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 492
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 493 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 551
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 552 TKDLLDLLVEAKQEVPSWLE 571
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 143 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 201
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 202 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGR 261
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 262 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 321
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 322 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 381
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 382 ATFPKEIQ 389
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 124/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 312 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 371
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 372 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLD 431
Query: 512 XXXXXDEDGVI-VFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D +I VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 432 LLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 491
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 492 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 550
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 551 TKDLLDLLVEAKQEVPSWLE 570
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 142 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 200
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 201 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGR 260
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 261 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 320
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 321 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 380
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 381 ATFPKEIQ 388
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 124/260 (47%), Positives = 172/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 309 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 368
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 369 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLD 428
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 429 ILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 488
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI +RHVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 489 ILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-EKNMNI 547
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 548 TKDLLDLLVEAKQEVPSWLE 567
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 119/249 (47%), Positives = 169/249 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G N P IE+F + EI++ N++ + YT+
Sbjct: 139 ERLEQELFSGG-NTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTR 197
Query: 221 PTPIQKYAIPAGLEG-RDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------G 270
PTP+QK+AIP ++G RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 198 PTPVQKHAIPI-IKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYG 256
Query: 271 YCAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILV 329
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LV
Sbjct: 257 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 316
Query: 330 ATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMF 389
AT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MF
Sbjct: 317 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 376
Query: 390 SATFPETIQ 398
SATFP+ IQ
Sbjct: 377 SATFPKEIQ 385
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 124/260 (47%), Positives = 172/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 312 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 371
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 372 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLD 431
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 432 ILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 491
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI +RHVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 492 ILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-EKNMNI 550
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 551 TKDLLDLLVEAKQEVPSWLE 570
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 119/249 (47%), Positives = 169/249 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G N P IE+F + EI++ N++ + YT+
Sbjct: 142 ERLEQELFSGG-NTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTR 200
Query: 221 PTPIQKYAIPAGLEG-RDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------G 270
PTP+QK+AIP ++G RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 201 PTPVQKHAIPI-IKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYG 259
Query: 271 YCAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILV 329
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LV
Sbjct: 260 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 319
Query: 330 ATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMF 389
AT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MF
Sbjct: 320 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 379
Query: 390 SATFPETIQ 398
SATFP+ IQ
Sbjct: 380 SATFPKEIQ 388
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 122/260 (46%), Positives = 174/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 313 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 372
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 373 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLD 432
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L + A TSIHG R Q RE+A+H F++ +
Sbjct: 433 LLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKP 492
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 493 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNLNI 551
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 552 TKDLLDLLVEAKQEVPSWLE 571
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 119/248 (47%), Positives = 170/248 (68%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IE+F + EI++ N++ + YT+
Sbjct: 143 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTR 201
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 202 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGR 261
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA ++ R LE+GC++LVA
Sbjct: 262 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVA 321
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 322 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 381
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 382 ATFPKEIQ 389
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 313 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 372
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 373 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLD 432
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 433 LLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 492
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 493 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 551
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 552 TKDLLDLLVEAKQEVPSWLE 571
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 143 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 201
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 202 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGR 261
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 262 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 321
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 322 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 381
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 382 ATFPKEIQ 389
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 314 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 373
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 374 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLD 433
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 434 LLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 493
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 494 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 552
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 553 TKDLLDLLVEAKQEVPSWLE 572
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 144 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 202
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 203 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGR 262
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 263 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 322
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 323 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 382
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 383 ATFPKEIQ 390
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 314 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 373
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 374 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLD 433
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 434 LLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 493
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 494 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 552
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 553 TKDLLDLLVEAKQEVPSWLE 572
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 144 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 202
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 203 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGR 262
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 263 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 322
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 323 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 382
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 383 ATFPKEIQ 390
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 122/260 (46%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 307 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 366
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 367 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLD 426
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
D + +VFV T + AD + +L + A TSIHG R Q RE+A+H F++ +
Sbjct: 427 LLNATGRDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKP 486
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 487 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNLNI 545
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 546 TKDLLDLLVEAKQEVPSWLE 565
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 117/248 (47%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G GINF ++++ V+ +G+N P IE+F + EI++ N++ + YT+
Sbjct: 137 ERLEQELFSGG-NAGINFEKYDDIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTR 195
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSG TAAFL+PI+ + + PGE + G
Sbjct: 196 PTPVQKHAIPIIKEKRDLMACAQTGSGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGR 255
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA ++ R LE+GC++LVA
Sbjct: 256 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVA 315
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 316 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 375
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 376 ATFPKEIQ 383
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 314 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 373
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 374 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLD 433
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 434 LLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 493
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 494 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 552
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 553 TKDLLDLLVEAKQEVPSWLE 572
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 144 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 202
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 203 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGR 262
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 263 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVA 322
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 323 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 382
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 383 ATFPKEIQ 390
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 314 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 373
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 374 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLD 433
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 434 LLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 493
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 494 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 552
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 553 TKDLLDLLVEAKQEVPSWLE 572
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 144 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 202
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 203 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGR 262
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 263 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVA 322
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 323 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 382
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 383 ATFPKEIQ 390
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 292 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 351
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 352 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLD 411
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 412 LLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 471
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 472 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 530
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 531 TKDLLDLLVEAKQEVPSWLE 550
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 120/248 (48%), Positives = 167/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G N P IESF + EI++ N++ + YT+
Sbjct: 122 ERLEQELFS-GSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTR 180
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PG+ + G
Sbjct: 181 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGR 240
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K+AY S ++ C+ YGGA R LE+GC++LVA
Sbjct: 241 RKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 300
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 301 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 360
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 361 ATFPKEIQ 368
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 291 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 350
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 351 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLD 410
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 411 LLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 470
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 471 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 529
Query: 631 AKDLVRILEQAGQPVPEFLK 650
KDL+ +L +A Q VP +L+
Sbjct: 530 TKDLLDLLVEAKQEVPSWLE 549
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 119/249 (47%), Positives = 166/249 (66%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G N P IESF + EI++ N++ + YT+
Sbjct: 120 ERLEQELFS-GSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTR 178
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVTGYCAQ----- 274
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PG+ + A
Sbjct: 179 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKATNGRYG 238
Query: 275 -----PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILV 329
P ++ APTREL +QI+E A K+AY S ++ C+ YGGA R LE+GC++LV
Sbjct: 239 RRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 298
Query: 330 ATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMF 389
AT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MF
Sbjct: 299 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 358
Query: 390 SATFPETIQ 398
SATFP+ IQ
Sbjct: 359 SATFPKEIQ 367
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 386 (140.9 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 87/215 (40%), Positives = 126/215 (58%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G P PI S++ + L +++ + K Y +PTPIQ+ AIP GL+ RD++G
Sbjct: 374 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 433
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKTAAFLIP++ + P + + P II APTREL QI E K+
Sbjct: 434 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKP 493
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ GG S +L GC I++AT GRL D+L+ + L+ +VVLDEADRM
Sbjct: 494 LGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM 553
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
+DMGF D+Q +++H MP V+N++ A PE
Sbjct: 554 IDMGFEPDVQKILEH--MP-VSNQKPDTDEAEDPE 585
Score = 251 (93.4 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 63/194 (32%), Positives = 100/194 (51%)
Query: 461 RQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
RQT+MF+AT P E + ++Y+ + +G G V Q + +
Sbjct: 599 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 658
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
+ +I+FV+ + D +A L + ++HG + Q QRE A+ + K +LV
Sbjct: 659 EQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILV 718
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA RG+DI+ + V+NYD+ + I++Y+HRIGRTGR G G A +F + D A+ +
Sbjct: 719 ATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSAVFYE 777
Query: 634 LVR-ILEQAGQPVP 646
L + ILE P
Sbjct: 778 LKQAILESPVSSCP 791
Score = 164 (62.8 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ GC I++AT GRL D+L+ + L+ +VVLDEADRM+DMGF D+Q +++H MP V
Sbjct: 515 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP-V 571
Query: 459 ANRQTLMFSATFPETIQKNY 478
+N++ A PE + N+
Sbjct: 572 SNQKPDTDEAEDPEKMLANF 591
Score = 50 (22.7 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 384 RQTLMFSATFPETIQK 399
RQT+MF+AT P +++
Sbjct: 599 RQTVMFTATMPPAVER 614
Score = 42 (19.8 bits), Expect = 8.8e-34, Sum P(2) = 8.8e-34
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 398 QKKGCNILVATMGRL 412
QKKGC++L ++ ++
Sbjct: 672 QKKGCDVLAKSLEKM 686
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 386 (140.9 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 87/215 (40%), Positives = 126/215 (58%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G P PI S++ + L +++ + K Y +PTPIQ+ AIP GL+ RD++G
Sbjct: 375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKTAAFLIP++ + P + + P II APTREL QI E K+
Sbjct: 435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKP 494
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ GG S +L GC I++AT GRL D+L+ + L+ +VVLDEADRM
Sbjct: 495 LGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM 554
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
+DMGF D+Q +++H MP V+N++ A PE
Sbjct: 555 IDMGFEPDVQKILEH--MP-VSNQKPDTDEAEDPE 586
Score = 251 (93.4 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 63/194 (32%), Positives = 100/194 (51%)
Query: 461 RQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
RQT+MF+AT P E + ++Y+ + +G G V Q + +
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 659
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
+ +I+FV+ + D +A L + ++HG + Q QRE A+ + K +LV
Sbjct: 660 EQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILV 719
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA RG+DI+ + V+NYD+ + I++Y+HRIGRTGR G G A +F + D A+ +
Sbjct: 720 ATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSAVFYE 778
Query: 634 LVR-ILEQAGQPVP 646
L + ILE P
Sbjct: 779 LKQAILESPVSSCP 792
Score = 164 (62.8 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ GC I++AT GRL D+L+ + L+ +VVLDEADRM+DMGF D+Q +++H MP V
Sbjct: 516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP-V 572
Query: 459 ANRQTLMFSATFPETIQKNY 478
+N++ A PE + N+
Sbjct: 573 SNQKPDTDEAEDPEKMLANF 592
Score = 50 (22.7 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 384 RQTLMFSATFPETIQK 399
RQT+MF+AT P +++
Sbjct: 600 RQTVMFTATMPPAVER 615
Score = 42 (19.8 bits), Expect = 8.8e-34, Sum P(2) = 8.8e-34
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 398 QKKGCNILVATMGRL 412
QKKGC++L ++ ++
Sbjct: 673 QKKGCDVLAKSLEKM 687
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 386 (140.9 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 87/215 (40%), Positives = 126/215 (58%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G P PI S++ + L +++ + K Y +PTPIQ+ AIP GL+ RD++G
Sbjct: 375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKTAAFLIP++ + P + + P II APTREL QI E K+
Sbjct: 435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKP 494
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ GG S +L GC I++AT GRL D+L+ + L+ +VVLDEADRM
Sbjct: 495 LGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM 554
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
+DMGF D+Q +++H MP V+N++ A PE
Sbjct: 555 IDMGFEPDVQKILEH--MP-VSNQKPDTDEAEDPE 586
Score = 251 (93.4 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 63/194 (32%), Positives = 100/194 (51%)
Query: 461 RQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
RQT+MF+AT P E + ++Y+ + +G G V Q + +
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 659
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
+ +I+FV+ + D +A L + ++HG + Q QRE A+ + K +LV
Sbjct: 660 EQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILV 719
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA RG+DI+ + V+NYD+ + I++Y+HRIGRTGR G G A +F + D A+ +
Sbjct: 720 ATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSAVFYE 778
Query: 634 LVR-ILEQAGQPVP 646
L + ILE P
Sbjct: 779 LKQAILESPVSSCP 792
Score = 164 (62.8 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ GC I++AT GRL D+L+ + L+ +VVLDEADRM+DMGF D+Q +++H MP V
Sbjct: 516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP-V 572
Query: 459 ANRQTLMFSATFPETIQKNY 478
+N++ A PE + N+
Sbjct: 573 SNQKPDTDEAEDPEKMLANF 592
Score = 50 (22.7 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 384 RQTLMFSATFPETIQK 399
RQT+MF+AT P +++
Sbjct: 600 RQTVMFTATMPPAVER 615
Score = 42 (19.8 bits), Expect = 8.8e-34, Sum P(2) = 8.8e-34
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 398 QKKGCNILVATMGRL 412
QKKGC++L ++ ++
Sbjct: 673 QKKGCDVLAKSLEKM 687
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 386 (140.9 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 87/215 (40%), Positives = 126/215 (58%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G P PI S++ + L +++ + K Y +PTPIQ+ AIP GL+ RD++G
Sbjct: 375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKTAAFLIP++ + P + + P II APTREL QI E K+
Sbjct: 435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKP 494
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ GG S +L GC I++AT GRL D+L+ + L+ +VVLDEADRM
Sbjct: 495 LGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM 554
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
+DMGF D+Q +++H MP V+N++ A PE
Sbjct: 555 IDMGFEPDVQKILEH--MP-VSNQKPDTDEAEDPE 586
Score = 251 (93.4 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 63/194 (32%), Positives = 100/194 (51%)
Query: 461 RQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
RQT+MF+AT P E + ++Y+ + +G G V Q + +
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 659
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
+ +I+FV+ + D +A L + ++HG + Q QRE A+ + K +LV
Sbjct: 660 EQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILV 719
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA RG+DI+ + V+NYD+ + I++Y+HRIGRTGR G G A +F + D A+ +
Sbjct: 720 ATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSAVFYE 778
Query: 634 LVR-ILEQAGQPVP 646
L + ILE P
Sbjct: 779 LKQAILESPVSSCP 792
Score = 164 (62.8 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ GC I++AT GRL D+L+ + L+ +VVLDEADRM+DMGF D+Q +++H MP V
Sbjct: 516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP-V 572
Query: 459 ANRQTLMFSATFPETIQKNY 478
+N++ A PE + N+
Sbjct: 573 SNQKPDTDEAEDPEKMLANF 592
Score = 50 (22.7 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 384 RQTLMFSATFPETIQK 399
RQT+MF+AT P +++
Sbjct: 600 RQTVMFTATMPPAVER 615
Score = 42 (19.8 bits), Expect = 8.8e-34, Sum P(2) = 8.8e-34
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 398 QKKGCNILVATMGRL 412
QKKGC++L ++ ++
Sbjct: 673 QKKGCDVLAKSLEKM 687
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 123/260 (47%), Positives = 173/260 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 314 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPK 373
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 374 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLD 433
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 434 LLNATGTDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 493
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I
Sbjct: 494 ILVATAVAARGLDISNVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINI 552
Query: 631 AKDLVRILEQAGQPVPEFLK 650
+KDL+ +L +A Q VP +L+
Sbjct: 553 SKDLLDLLVEAKQEVPSWLE 572
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 121/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+V+G+N P IESF + EI++ N++ + YT+
Sbjct: 144 ERLEQELFSGG-NTGINFEKYDDIPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTR 202
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 203 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGR 262
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S + C+ YGGA R LE+GC++LVA
Sbjct: 263 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVA 322
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 323 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFS 382
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 383 ATFPKEIQ 390
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 380 (138.8 bits), Expect = 3.9e-57, Sum P(3) = 3.9e-57
Identities = 83/203 (40%), Positives = 119/203 (58%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ V + G P PI S+ +G + ++ + K Y +PTPIQ+ AIP GL+ RD++G
Sbjct: 378 EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 437
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKT AFLIP++ + P E + P II APTREL QI E K+
Sbjct: 438 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQP 497
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ + GG S +L GC I++AT GRL D+L+ + L ++VLDEADRM
Sbjct: 498 LGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRM 557
Query: 361 LDMGFLGDIQHVMQHSTMPDVAN 383
+DMGF D+Q ++++ MP V N
Sbjct: 558 IDMGFEPDVQKILEY--MP-VTN 577
Score = 258 (95.9 bits), Expect = 3.9e-57, Sum P(3) = 3.9e-57
Identities = 65/181 (35%), Positives = 96/181 (53%)
Query: 461 RQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
RQT+MF+AT P E + + Y+ + +G +G + Q + +
Sbjct: 602 RQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEIL 661
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
+ VI+FV+ + AD +A L + + ++HG + Q QRE A+ K+ +LV
Sbjct: 662 SRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILV 721
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA RG+DIK + VINYD+ + I++Y HRIGRTGR G G A SF D D A+ D
Sbjct: 722 ATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKD-DSALFYD 780
Query: 634 L 634
L
Sbjct: 781 L 781
Score = 142 (55.0 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 401 GCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVAN 460
GC I++AT GRL D+L+ + L ++VLDEADRM+DMGF D+Q ++++ MP V N
Sbjct: 521 GCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEY--MP-VTN 577
Score = 50 (22.7 bits), Expect = 3.9e-57, Sum P(3) = 3.9e-57
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 384 RQTLMFSATFPETIQK 399
RQT+MF+AT P +++
Sbjct: 602 RQTVMFTATMPPAVER 617
Score = 37 (18.1 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 189 SGDNPPRP--IESFESAGLREILVK 211
+GD PP+P ++ E +E VK
Sbjct: 101 TGDAPPKPLIVDDEEQQDGKEAKVK 125
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 123/253 (48%), Positives = 168/253 (66%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
YIP + ED++F+ QTGINF ++ + V+VSG + P I +FE A L + L N+
Sbjct: 226 YIPPPPPEDEDSIFAH-YQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIA 284
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY--C 272
K+ YTK TP+QKY+IP L GRDLM CAQTGSGKTAAFL+PI+ H++ G + +
Sbjct: 285 KAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHD-GITASRFKEL 343
Query: 273 AQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATM 332
+PE II APTRELV QI+ A K+++ + ++ + YGG H RQ+ +GCNIL AT
Sbjct: 344 QEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATP 403
Query: 333 GRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP RQTLMFSAT
Sbjct: 404 GRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 463
Query: 393 FPETIQKKGCNIL 405
FPE IQ+ L
Sbjct: 464 FPEEIQRLAAEFL 476
Score = 278 (102.9 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 58/109 (53%), Positives = 77/109 (70%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GCNIL AT GRL DI+ + +I L ++++VLDEADRMLDMGF +++ ++ MP
Sbjct: 394 QGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 453
Query: 460 NRQTLMFSATFPETIQK--------NYIFIAVGIIGGASTDVVQTILEV 500
RQTLMFSATFPE IQ+ NY+F+AVG +GGA DV QT+L+V
Sbjct: 454 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQV 502
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 123/262 (46%), Positives = 174/262 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 356 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 415
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 416 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLD 475
Query: 512 XXXXXD--EDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
+ +D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 476 LLNATESGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK 535
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG 628
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++
Sbjct: 536 SPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNI 594
Query: 629 AIAKDLVRILEQAGQPVPEFLK 650
I KDL+ +L +A Q VP +L+
Sbjct: 595 NITKDLLDLLVEAKQEVPSWLE 616
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 120/248 (48%), Positives = 168/248 (67%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N P IESF + EI++ N++ + YT+
Sbjct: 186 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTR 244
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 245 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGR 304
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 305 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 364
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 365 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 424
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 425 ATFPKEIQ 432
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 123/263 (46%), Positives = 173/263 (65%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC++LVAT GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP
Sbjct: 315 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 374
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
R T+MFSATFP+ IQ YIF+AVG +G S ++ Q ++ V
Sbjct: 375 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLD 434
Query: 512 XXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D + +VFV T + AD + +L A TSIHG R Q RE+A+H F++ K
Sbjct: 435 LLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 494
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGR---ATSFYDPDQD 627
+LVATAVA+RGLDI ++HVIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++
Sbjct: 495 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLIGLATSFFN-ERN 553
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
I KDL+ +L +A Q VP +L+
Sbjct: 554 INITKDLLDLLVEAKQEVPSWLE 576
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 121/248 (48%), Positives = 169/248 (68%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G TGINF ++++ V+ +G+N PR IESF + EI++ N++ + YT+
Sbjct: 145 ERLEQELFSGG-NTGINFEKYDDIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTR 203
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-ESPGELVT--------GY 271
PTP+QK+AIP E RDLM CAQTGSGKTAAFL+PI+ + + PGE + G
Sbjct: 204 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGR 263
Query: 272 CAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
Q P ++ APTREL +QI+E A K++Y S ++ C+ YGGA R LE+GC++LVA
Sbjct: 264 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 323
Query: 331 TMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFS 390
T GRL D+++RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFS
Sbjct: 324 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFS 383
Query: 391 ATFPETIQ 398
ATFP+ IQ
Sbjct: 384 ATFPKEIQ 391
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 126/266 (47%), Positives = 171/266 (64%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +ILVAT GRL D+L+RGR+SL VRF+ LDEADRMLDMGF I+ ++Q MP
Sbjct: 272 ERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPP 331
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTD-VVQTILEVPXXXXXXXXX 510
RQT++FSATFP IQ+ NYIF+AVG +G +STD +VQ + V
Sbjct: 332 GVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVG-SSTDLIVQRVEFVHDSDKRSHLM 390
Query: 511 XXXXXXDEDG-------VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHD 563
E+G +VFV T + AD + +LC T+IHG R Q +RE A+
Sbjct: 391 DLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRS 450
Query: 564 FKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYD 623
FKT + +LVAT VA+RGLDI + HV+N+DLP +ID+YVHRIGRTGR GN G AT+F++
Sbjct: 451 FKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFN 510
Query: 624 PDQDGAIAKDLVRILEQAGQPVPEFL 649
D + +AK L ++++A Q VP++L
Sbjct: 511 -DNNTTMAKPLAELMQEANQEVPDWL 535
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 123/287 (42%), Positives = 172/287 (59%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
D + D + T INF +E++ ++ SGDN P P+ +F L E L N+++ Y K
Sbjct: 109 DGNADPAVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVK 168
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCA-QPEVI 278
PTP+Q+ AIP GRDLM CAQTGSGKTAAF PI+ +++ E G P +
Sbjct: 169 PTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAV 228
Query: 279 ICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDI 338
I +PTREL QIH+ A K++Y + +K+ + YGG R+LE+G +ILVAT GRL D+
Sbjct: 229 ILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDL 288
Query: 339 LDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
L+RGR+SL VRF+ LDEADRMLDMGF I+ ++Q MP RQT++FSATFP IQ
Sbjct: 289 LERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQ 348
Query: 399 KKGC----NILVATMGRLKDILDRGRISLASVRFVV-LDEADRMLDM 440
+ N + +GR+ D + + V FV D+ ++D+
Sbjct: 349 RLASDFLSNYIFLAVGRVGSSTD---LIVQRVEFVHDSDKRSHLMDL 392
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 121/264 (45%), Positives = 170/264 (64%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC+ILVAT GRL D+L+R R+S+ +RF+ LDEADRMLDMGF I+ +++ MP
Sbjct: 277 ERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPR 336
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXX- 510
RQT++FSATFP IQ+ NYIF+AVG +G +STD++ +E
Sbjct: 337 GVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVG-SSTDLITQRVEFVQESDKRSHLM 395
Query: 511 ----XXXXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFK 565
D+ + +VFV T R AD + +LC E TSIHG R Q +RE A+ FK
Sbjct: 396 DLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFK 455
Query: 566 TKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
T + +LVAT VA+RGLDI + HV+N+DLP +ID+YVHRIGRTGR G G AT+F++ +
Sbjct: 456 TGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFN-E 514
Query: 626 QDGAIAKDLVRILEQAGQPVPEFL 649
+ +A+ L ++++A Q VPE+L
Sbjct: 515 NNAQLARSLAELMQEANQEVPEWL 538
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 128/316 (40%), Positives = 186/316 (58%)
Query: 161 DQSE-DNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYT 219
D +E + +F+ TGINF +E++ V+ SG + P P+ +F L + L N+++ Y
Sbjct: 113 DDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYV 172
Query: 220 KPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCA-QPEV 277
+PTP+Q++AIP L RDLM CAQTGSGKTAAF PI+ +++ E G A P
Sbjct: 173 RPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFA 232
Query: 278 IICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKD 337
+I +PTREL QIH+ A K++Y + +K+ + YGG R+LE+GC+ILVAT GRL D
Sbjct: 233 VILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLND 292
Query: 338 ILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETI 397
+L+R R+S+ +RF+ LDEADRMLDMGF I+ +++ MP RQT++FSATFP I
Sbjct: 293 LLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQI 352
Query: 398 QKKGC----NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 453
Q+ N + +GR+ D L + R + E+D+ L D+ H Q
Sbjct: 353 QRLAADFMSNYIFLAVGRVGSSTD-----LITQRVEFVQESDKR---SHLMDLLHA-QRE 403
Query: 454 TMPDVANRQTLMFSAT 469
T + TL+F T
Sbjct: 404 TQDKQS--LTLVFVET 417
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 120/265 (45%), Positives = 175/265 (66%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GC+++VAT GRL+D++ RG++ L ++RF+VLDEADRMLDMGF I+ +++ MP
Sbjct: 427 RGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTG 486
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEV--PXXXXXXXXX 510
RQTLMFSATFP+ IQ+ NYIF+AVG +G S ++ QTIL V P
Sbjct: 487 QRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDL 546
Query: 511 XXXXXXD----EDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFK 565
+D + ++FV T + AD + +L + TSIHG R Q +RE+A+ F+
Sbjct: 547 LSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFR 606
Query: 566 TKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
+ +LVATAVA+RGLDI ++HVIN+DLP +++EYVHRIGRTGR+GN G ATSF++ +
Sbjct: 607 SGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-E 665
Query: 626 QDGAIAKDLVRILEQAGQPVPEFLK 650
++ I DL+ +L + Q +P F++
Sbjct: 666 KNRNICSDLLELLIETKQEIPSFME 690
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 118/252 (46%), Positives = 167/252 (66%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LF G TGINF +E++ V+ +G N P I SF+ L EI+ N+ + Y K
Sbjct: 259 ERLEVELFGVG-NTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDK 317
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLE----SPGELVTGYCAQ-- 274
PTP+QK+AIP + GRDLM CAQTGSGKTAAFL+PI++ + E P + Y +
Sbjct: 318 PTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQ 377
Query: 275 -PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMG 333
P ++ APTREL QI E A K+AY S ++ + YGG ++ R+L++GC+++VAT G
Sbjct: 378 YPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPG 437
Query: 334 RLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATF 393
RL+D++ RG++ L ++RF+VLDEADRMLDMGF I+ +++ MP RQTLMFSATF
Sbjct: 438 RLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATF 497
Query: 394 PETIQKKGCNIL 405
P+ IQ+ + L
Sbjct: 498 PKQIQELASDFL 509
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 539 (194.8 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 118/247 (47%), Positives = 160/247 (64%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
+ SE NLF +GINF +EN+ V+VSGD+ P IE F AG +++N+ +S Y+K
Sbjct: 103 EYSESNLFHR-TDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSK 161
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELV------TGYCAQ 274
PTP+QK++IP L RDLM CAQTGSGKTAAFL+PI+ H+L ++V G
Sbjct: 162 PTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTY 221
Query: 275 -PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMH--FNRQLEKGCNILVAT 331
P ++ +PTREL +QIH+ A K++Y S ++ + YGG + NR L G +IL+AT
Sbjct: 222 YPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNR-LRAGTHILIAT 280
Query: 332 MGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSA 391
GRL DI+++G I LA R++VLDEADRMLDMGF I+ ++ P A R T MFSA
Sbjct: 281 PGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTA-RTTAMFSA 339
Query: 392 TFPETIQ 398
TFP+ IQ
Sbjct: 340 TFPKEIQ 346
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 122/260 (46%), Positives = 166/260 (63%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ G +IL+AT GRL DI+++G I LA R++VLDEADRMLDMGF I+ ++ P
Sbjct: 271 RAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKT 330
Query: 459 ANRQTLMFSATFPETIQ--------KNYIFIAVGIIGGASTDVVQTILEV-PXXXXXXXX 509
A R T MFSATFP+ IQ NYIF+AVG +G S ++ Q +L V
Sbjct: 331 A-RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLM 389
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
E+ V+VFV T R A+ +A +L +I + SIHG Q +RE+ + F++ +
Sbjct: 390 EILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQC 449
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+LVATAVA+RGLDI +RHVINYDLP + DEYVHRIGRTGR GN G ATSF++ D++
Sbjct: 450 PILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFN-DKNRG 508
Query: 630 IAKDLVRILEQAGQPVPEFL 649
I +DL ++ ++ Q VPE+L
Sbjct: 509 IGRDLKNLIVESNQEVPEWL 528
Score = 54 (24.1 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 11/39 (28%), Positives = 25/39 (64%)
Query: 579 SRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGR 617
+RG+ + ++++I + QE+ E++H++ GR+G R
Sbjct: 506 NRGIG-RDLKNLI-VESNQEVPEWLHQVAAEGRIGGGQR 542
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 362 (132.5 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 79/195 (40%), Positives = 122/195 (62%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ E+ + G P PI +E + L L+K +KK+ Y KPTPIQ AIP LE RDL+G
Sbjct: 682 EDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGI 741
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQ--PEVIICAPTRELVMQIHEVACKYA- 298
A+TGSGKTAAF++P++ ++ + P +T +Q P ++ AP+REL +QI+E K+A
Sbjct: 742 AETGSGKTAAFVLPMLSYVKQLPP--LTYETSQDGPYALVIAPSRELAIQIYEETNKFAS 799
Query: 299 YSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEAD 358
Y S + + GG ++ +L +G I++ T GRL+D L++ L +V+LDEAD
Sbjct: 800 YCSCRTVAV-VGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEAD 858
Query: 359 RMLDMGFLGDIQHVM 373
RM+DMGF + +++
Sbjct: 859 RMMDMGFEDTVHYIL 873
Score = 284 (105.0 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 69/193 (35%), Positives = 102/193 (52%)
Query: 461 RQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
R T MFSAT P E + + Y+ +I++G G + Q LE
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQK-LEFLTEGKKKQKLQEI 962
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
E +IVFV+ + AD I+ + + + ++HG + Q REQ + FK + +LV
Sbjct: 963 LEMYEPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILV 1022
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA RG+D+ G++ VIN+D+P++I+ Y HRIGRTGR G KG A SF + D + D
Sbjct: 1023 ATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFIT-EHDSHLFYD 1081
Query: 634 LVRILEQAGQPVP 646
L + L + VP
Sbjct: 1082 LKQFLISSNNIVP 1094
Score = 120 (47.3 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 450
++G I++ T GRL+D L++ L +V+LDEADRM+DMGF + +++
Sbjct: 822 RRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMGFEDTVHYIL 873
Score = 44 (20.5 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 384 RQTLMFSATFPETIQK 399
R T MFSAT P ++++
Sbjct: 904 RLTQMFSATMPPSVER 919
Score = 40 (19.1 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 162 QSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKN 212
Q+E F + I+ N SG E E D E E + I +KN
Sbjct: 158 QNEKTKFKTSIKLYYNNSGSEEEESNDDDDYNNNKDEKKEKLIKKNITMKN 208
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 362 (132.5 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 79/195 (40%), Positives = 122/195 (62%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ E+ + G P PI +E + L L+K +KK+ Y KPTPIQ AIP LE RDL+G
Sbjct: 682 EDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGI 741
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQ--PEVIICAPTRELVMQIHEVACKYA- 298
A+TGSGKTAAF++P++ ++ + P +T +Q P ++ AP+REL +QI+E K+A
Sbjct: 742 AETGSGKTAAFVLPMLSYVKQLPP--LTYETSQDGPYALVIAPSRELAIQIYEETNKFAS 799
Query: 299 YSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEAD 358
Y S + + GG ++ +L +G I++ T GRL+D L++ L +V+LDEAD
Sbjct: 800 YCSCRTVAV-VGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEAD 858
Query: 359 RMLDMGFLGDIQHVM 373
RM+DMGF + +++
Sbjct: 859 RMMDMGFEDTVHYIL 873
Score = 284 (105.0 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 69/193 (35%), Positives = 102/193 (52%)
Query: 461 RQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
R T MFSAT P E + + Y+ +I++G G + Q LE
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQK-LEFLTEGKKKQKLQEI 962
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
E +IVFV+ + AD I+ + + + ++HG + Q REQ + FK + +LV
Sbjct: 963 LEMYEPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILV 1022
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA RG+D+ G++ VIN+D+P++I+ Y HRIGRTGR G KG A SF + D + D
Sbjct: 1023 ATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFIT-EHDSHLFYD 1081
Query: 634 LVRILEQAGQPVP 646
L + L + VP
Sbjct: 1082 LKQFLISSNNIVP 1094
Score = 120 (47.3 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 450
++G I++ T GRL+D L++ L +V+LDEADRM+DMGF + +++
Sbjct: 822 RRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMGFEDTVHYIL 873
Score = 44 (20.5 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 384 RQTLMFSATFPETIQK 399
R T MFSAT P ++++
Sbjct: 904 RLTQMFSATMPPSVER 919
Score = 40 (19.1 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 162 QSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKN 212
Q+E F + I+ N SG E E D E E + I +KN
Sbjct: 158 QNEKTKFKTSIKLYYNNSGSEEEESNDDDDYNNNKDEKKEKLIKKNITMKN 208
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 124/292 (42%), Positives = 179/292 (61%)
Query: 157 PKDVDQSE-DNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKK 215
P + D SE + F+ T INF +E++ ++ SGDN P P+ +F L E L N+++
Sbjct: 117 PFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRR 176
Query: 216 SNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPG-ELVTGY-CA 273
Y KPTP+Q++AIP LEGRDLM CAQTGSGKTAAF PI+ +++ + G
Sbjct: 177 CKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTV 236
Query: 274 QPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMG 333
P +I +PTREL QIH+ A K++Y + +K+ + YGG R+LE+G +ILVAT G
Sbjct: 237 YPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPG 296
Query: 334 RLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATF 393
RL D+L+R R+S+ +RF+ LDEADRMLDMGF I+ +++ MP RQTL+FSATF
Sbjct: 297 RLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATF 356
Query: 394 PETIQKKGC----NILVATMGRLKDILDRGRISLASVRFVV-LDEADRMLDM 440
P IQ+ N + +GR+ D + + V FV+ D+ ++D+
Sbjct: 357 PREIQRLAADFLANYIFLAVGRVGSSTD---LIVQRVEFVLDSDKRSHLMDL 405
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 123/266 (46%), Positives = 171/266 (64%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +ILVAT GRL D+L+R R+S+ +RF+ LDEADRMLDMGF I+ +++ MP
Sbjct: 285 ERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPR 344
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTD-VVQTILEVPXXXXXXXXX 510
RQTL+FSATFP IQ+ NYIF+AVG +G +STD +VQ + V
Sbjct: 345 GVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVG-SSTDLIVQRVEFVLDSDKRSHLM 403
Query: 511 XXXXXXDEDGV-------IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHD 563
E+G+ +VFV T R AD + +LC TSIHG R Q +RE A+
Sbjct: 404 DLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKA 463
Query: 564 FKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYD 623
FK+ + +LVAT VA+RGLDI + HV+N+DLP +ID+YVHRIGRTGR G G AT+F++
Sbjct: 464 FKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN 523
Query: 624 PDQDGAIAKDLVRILEQAGQPVPEFL 649
D + ++A+ L ++++A Q VPE+L
Sbjct: 524 -DGNTSLARPLAELMQEANQEVPEWL 548
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 371 (135.7 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 84/219 (38%), Positives = 126/219 (57%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G P PI +++ L +++ ++K Y PTPIQ+ AIP GL+ RD++G
Sbjct: 362 EDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGV 421
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKTAAFLIP++ + P + + P II APTREL QI E K+
Sbjct: 422 AETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQIEEETIKFGKP 481
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ GG S +L GC I++AT GRL D+L+ + L+ +VVLDEADRM
Sbjct: 482 LGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM 541
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
+DMGF D+Q ++++ +P V N++ A PE + +
Sbjct: 542 IDMGFEPDVQKILEY--IP-VTNQKPDTDDAEDPEKMMQ 577
Score = 259 (96.2 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 67/210 (31%), Positives = 107/210 (50%)
Query: 445 DIQHVMQHSTMPDVANRQTLMFSATFP---ETIQKNYI----FIAVGIIGGASTDVVQTI 497
D + +MQ+ RQT+MF+AT P E + ++Y+ + +G G V Q +
Sbjct: 571 DPEKMMQNFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKV 630
Query: 498 LEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQR 557
+ + E +I+FV+ + D +A L + ++HG + Q QR
Sbjct: 631 ILMSEGEKRKKLLEVLASGFEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQR 690
Query: 558 EQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGR 617
E A+ + K +LVAT VA RG+DI+ + V+NYD+ + I++Y+HRIGRTGR G G
Sbjct: 691 EFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGV 750
Query: 618 ATSFYDPDQDGAIAKDLVR-ILEQAGQPVP 646
A +F + D ++ DL + ILE P
Sbjct: 751 AMTFLTKE-DSSVFYDLKQAILESPVSTCP 779
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ GC I++AT GRL D+L+ + L+ +VVLDEADRM+DMGF D+Q ++++ +P V
Sbjct: 503 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEY--IP-V 559
Query: 459 ANRQTLMFSATFPETIQKNY 478
N++ A PE + +N+
Sbjct: 560 TNQKPDTDDAEDPEKMMQNF 579
Score = 42 (19.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 398 QKKGCNILVATMGRL 412
QKKGC++L ++ ++
Sbjct: 660 QKKGCDVLAKSLEKM 674
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 117/259 (45%), Positives = 168/259 (64%)
Query: 401 GCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVAN 460
GC+IL+AT GRL D++D+G I + R++VLDEADRMLDMGF I+ +++ + MP
Sbjct: 366 GCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEE 425
Query: 461 RQTLMFSATFPETIQ--------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
R T MFSATFP+ IQ +NY+F+AVG +G S +++Q I+ V
Sbjct: 426 RITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMDL 485
Query: 513 XXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ + +VFV T R A +A YL +IHG Q +RE+ + F+T +
Sbjct: 486 LDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPI 545
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVATAVA+RGLDI ++HVINYDLP ++DEYVHRIGRTGRVGN G ATSF++ D++ IA
Sbjct: 546 LVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFN-DKNRNIA 604
Query: 632 KDLVRILEQAGQPVPEFLK 650
++L+ ++ +A Q +P++L+
Sbjct: 605 RELMDLIVEANQELPDWLE 623
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 113/247 (45%), Positives = 160/247 (64%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTK 220
++ E LFS G +GINF +E + V+ +GD+ P+PI F L E + +N+K + Y +
Sbjct: 195 ERIEQELFS-GQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDR 253
Query: 221 PTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLES-PGEL---VT---GYCA 273
PTP+QKY+IPA GRDLM CAQTGSGKTAAFL+P+++ +L+ P + VT G
Sbjct: 254 PTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKK 313
Query: 274 Q-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFN-RQLEKGCNILVAT 331
Q P ++ +PTREL +QI + K+AY + + L YGG + +L GC+IL+AT
Sbjct: 314 QYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIAT 373
Query: 332 MGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSA 391
GRL D++D+G I + R++VLDEADRMLDMGF I+ +++ + MP R T MFSA
Sbjct: 374 PGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSA 433
Query: 392 TFPETIQ 398
TFP+ IQ
Sbjct: 434 TFPKEIQ 440
>WB|WBGene00001601 [details] [associations]
symbol:glh-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
InParanoid:O76743 NextBio:873335 Uniprot:O76743
Length = 1156
Score = 339 (124.4 bits), Expect = 2.2e-52, Sum P(2) = 2.2e-52
Identities = 89/241 (36%), Positives = 131/241 (54%)
Query: 164 EDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAG-LREILVKNLKKSNYTKPT 222
+D +F + + V V +G + SF+ L + L NLK+ +PT
Sbjct: 702 DDKMFEDAVNNDDKIDFDQKV-VASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPT 760
Query: 223 PIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLES--PGELVTGYCAQPEVIIC 280
PIQ+ + + G D++ CA TGSGKT AFLIP + L+E VT P ++I
Sbjct: 761 PIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIV 820
Query: 281 APTRELVMQIHEVACKYAYSSVLKICLHYGGAS---SMHFNRQLEKGCNILVATMGRLKD 337
APTRELV Q A + Y + LK L +GG S ++ R + NILVATMGRL+D
Sbjct: 821 APTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQ-LNILVATMGRLQD 879
Query: 338 ILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETI 397
++ G +SL+ ++++VLDEADRM+D G+ V + P +QT++FSA+F E +
Sbjct: 880 FVNAGEVSLSKMKYIVLDEADRMVDSNDFGE--EVSKIIGSPGERTQQTVLFSASFSEDL 937
Query: 398 Q 398
Q
Sbjct: 938 Q 938
Score = 283 (104.7 bits), Expect = 2.2e-52, Sum P(2) = 2.2e-52
Identities = 68/198 (34%), Positives = 108/198 (54%)
Query: 467 SATFPETIQKNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXXXXXDEDGV----- 521
S P+ +++ Y + V G A+ + Q IL VP DE+ V
Sbjct: 939 SDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLLGI-DENTVTLLPD 997
Query: 522 --------IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
++FV++++ D +A + ++T S+H + Q QR++ + DF+ K + +V
Sbjct: 998 APIEKQKTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRGKYQCMV 1057
Query: 574 ATAVASRGLDIKGIRHVINYDLPQE--IDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
A+ V +RGL+I G+ HV+NYD+P + DEYV+RIGRTGR G G +T+F D + D I
Sbjct: 1058 ASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVENDTDII 1117
Query: 632 KDLVRILEQAGQPVPEFL 649
LV IL +A + VPE+L
Sbjct: 1118 PCLVSILNEAKKEVPEWL 1135
Score = 177 (67.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/108 (39%), Positives = 64/108 (59%)
Query: 403 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 462
NILVATMGRL+D ++ G +SL+ ++++VLDEADRM+D G+ V + P +Q
Sbjct: 868 NILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGE--EVSKIIGSPGERTQQ 925
Query: 463 TLMFSATFPETIQKN---------YIFIAVGIIGGASTDVVQTILEVP 501
T++FSA+F E +Q + Y + V G A+ + Q IL VP
Sbjct: 926 TVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPVP 973
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 113/259 (43%), Positives = 166/259 (64%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKV-SGDNPPRPIESFESAGLREILVKNL 213
+I + ++E+ + GI+F+ +++ ++ + + ++ P+ SF L ++L+ N+
Sbjct: 203 FIDLEEHKAEEIFKKNDDNIGIDFNAYDDDDISIETSEHICAPLNSFADVDLGDVLLGNI 262
Query: 214 KKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLL-----ESPGELV 268
K + YTKPTP+QK A+P L+ RDLM CAQTGSGKTAAFL PI+ +L E+P
Sbjct: 263 KHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGILLDGAPEAPPAYK 322
Query: 269 TGY--CAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCN 326
G A P ++ APTREL QI + A K++Y S + + YGGA H +L++GC+
Sbjct: 323 PGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVIYGGAEVFHQINELDRGCD 382
Query: 327 ILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQT 386
ILVAT GRL D+L RGR+SL+ ++++VLDEADRMLDMGF I+ ++ MP +RQT
Sbjct: 383 ILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQIISEFDMPGCRDRQT 442
Query: 387 LMFSATFPETIQKKGCNIL 405
LMFSATFP+ IQ + L
Sbjct: 443 LMFSATFPKQIQNLAADFL 461
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 110/259 (42%), Positives = 162/259 (62%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+GC+ILVAT GRL D+L RGR+SL+ ++++VLDEADRMLDMGF I+ ++ MP
Sbjct: 379 RGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQIISEFDMPGCR 438
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
+RQTLMFSATFP+ IQ NYIF+ VG++G + ++ Q I V
Sbjct: 439 DRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVG-TTQNITQRIEYVVEEDKNSYLLDY 497
Query: 513 XXXXDEDGV-IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
DG+ ++FV T R+ D + +L + TT IHG Q +RE A+ F++
Sbjct: 498 LSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENALQSFRSFATPF 557
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT +ASRGL I + VIN+DLP +I YVHRIGRTGR G KG A SF++ +++ +
Sbjct: 558 LVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFN-EKNKPVG 616
Query: 632 KDLVRILEQAGQPVPEFLK 650
+L+++++ + Q +P++ +
Sbjct: 617 AELLKLMKASNQDIPDWFE 635
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 114/241 (47%), Positives = 155/241 (64%)
Query: 418 RGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK- 476
RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFSATFP+ IQ
Sbjct: 78 RGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML 137
Query: 477 ------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXXXXXDEDGV-IVFVSTIR 529
YIF+AVG +G S ++ Q ++ V D + +VFV T +
Sbjct: 138 ARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKK 197
Query: 530 NADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRH 589
AD + +L A TSIHG R Q RE+A+H F++ K +LVATAVA+RGLDI +RH
Sbjct: 198 GADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRH 257
Query: 590 VINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFL 649
VIN+DLP +I+EYVHRIGRTGRVGN G ATSF++ +++ I KDL+ +L +A Q VP +L
Sbjct: 258 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-EKNMNITKDLLDLLVEAKQEVPSWL 316
Query: 650 K 650
+
Sbjct: 317 E 317
Score = 163 (62.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 341 RGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
RG+I L +++VLDEADRMLDMGF I+ +++ TMP R T+MFSATFP+ IQ
Sbjct: 78 RGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 135
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 325 (119.5 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 82/234 (35%), Positives = 130/234 (55%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G N P P+ + + + LV + + Y +PT +Q+ +IP L+ RD++G
Sbjct: 152 EDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGV 211
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGY---CAQPEVIICAPTRELVMQIHEVACKYA 298
A+TGSGKT AFLIP+++++L S E Y +P +I APTREL +QI + A K+
Sbjct: 212 AETGSGKTLAFLIPVLNYIL-SIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFC 270
Query: 299 YSSVLKICLHYGGASSMH-FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEA 357
++ GG N+ + G +++VAT GRL D ++R + L+ +V+DEA
Sbjct: 271 KKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEA 330
Query: 358 DRMLDMGFLGDIQHVM-------QHSTMPD-----VANRQTLMFSATFPETIQK 399
DRM+DMGF D+ V+ Q S+ D + R T+MF+AT T++K
Sbjct: 331 DRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTATISPTVEK 384
Score = 275 (101.9 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 68/204 (33%), Positives = 110/204 (53%)
Query: 461 RQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQTI-------LEVPXXXXX 506
R T+MF+AT T++K Y+ ++ +G G A ++ Q+ E
Sbjct: 369 RSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKL 428
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNA-DFIACYLCETEIATTSIHGSRLQSQREQAIHDFK 565
E+ +I+ + ++ D ++ L +I IHGS+ Q REQAI +F+
Sbjct: 429 IKIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITNFR 488
Query: 566 TKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
+ +VL+AT VA+RG+DI + VINY + ++ DEY+HRIGRTGR GN G + +F D
Sbjct: 489 NHESEVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFIS-D 547
Query: 626 QDGAIAKDLVRILEQAGQPVPEFL 649
QD I L + L++ G+ +P++L
Sbjct: 548 QDTEIFTPLKKFLKKGGKRLPDWL 571
Score = 138 (53.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 42/110 (38%), Positives = 62/110 (56%)
Query: 397 IQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM------ 450
I + G +++VAT GRL D ++R + L+ +V+DEADRM+DMGF D+ V+
Sbjct: 293 IDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTE 352
Query: 451 -QHSTMPD-----VANRQTLMFSATFPETIQK---NYIFIAVGI--IGGA 489
Q S+ D + R T+MF+AT T++K Y+ I G IGGA
Sbjct: 353 KQLSSTIDGRIFHLEKRSTMMFTATISPTVEKLTKKYL-IDPGYLYIGGA 401
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 325 (119.5 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 82/234 (35%), Positives = 130/234 (55%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G N P P+ + + + LV + + Y +PT +Q+ +IP L+ RD++G
Sbjct: 152 EDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGV 211
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGY---CAQPEVIICAPTRELVMQIHEVACKYA 298
A+TGSGKT AFLIP+++++L S E Y +P +I APTREL +QI + A K+
Sbjct: 212 AETGSGKTLAFLIPVLNYIL-SIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFC 270
Query: 299 YSSVLKICLHYGGASSMH-FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEA 357
++ GG N+ + G +++VAT GRL D ++R + L+ +V+DEA
Sbjct: 271 KKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEA 330
Query: 358 DRMLDMGFLGDIQHVM-------QHSTMPD-----VANRQTLMFSATFPETIQK 399
DRM+DMGF D+ V+ Q S+ D + R T+MF+AT T++K
Sbjct: 331 DRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTATISPTVEK 384
Score = 275 (101.9 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 68/204 (33%), Positives = 110/204 (53%)
Query: 461 RQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQTI-------LEVPXXXXX 506
R T+MF+AT T++K Y+ ++ +G G A ++ Q+ E
Sbjct: 369 RSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKL 428
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNA-DFIACYLCETEIATTSIHGSRLQSQREQAIHDFK 565
E+ +I+ + ++ D ++ L +I IHGS+ Q REQAI +F+
Sbjct: 429 IKIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITNFR 488
Query: 566 TKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
+ +VL+AT VA+RG+DI + VINY + ++ DEY+HRIGRTGR GN G + +F D
Sbjct: 489 NHESEVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFIS-D 547
Query: 626 QDGAIAKDLVRILEQAGQPVPEFL 649
QD I L + L++ G+ +P++L
Sbjct: 548 QDTEIFTPLKKFLKKGGKRLPDWL 571
Score = 138 (53.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 42/110 (38%), Positives = 62/110 (56%)
Query: 397 IQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM------ 450
I + G +++VAT GRL D ++R + L+ +V+DEADRM+DMGF D+ V+
Sbjct: 293 IDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTE 352
Query: 451 -QHSTMPD-----VANRQTLMFSATFPETIQK---NYIFIAVGI--IGGA 489
Q S+ D + R T+MF+AT T++K Y+ I G IGGA
Sbjct: 353 KQLSSTIDGRIFHLEKRSTMMFTATISPTVEKLTKKYL-IDPGYLYIGGA 401
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 384 (140.2 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 87/215 (40%), Positives = 126/215 (58%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G P PI S++ + L +++ + K Y +PTPIQ+ AIP GL+ RD++G
Sbjct: 375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKTAAFLIP++ + P + + P II APTREL QI E K+
Sbjct: 435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKP 494
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ GG S +L GC I++AT GRL D+L+ + L+ +VVLDEADRM
Sbjct: 495 LGIRPVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM 554
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
+DMGF D+Q +++H MP V+N++ A PE
Sbjct: 555 IDMGFEPDVQKILEH--MP-VSNQKPDTDEAEDPE 586
Score = 211 (79.3 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 44/105 (41%), Positives = 66/105 (62%)
Query: 547 SIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRI 606
++HG + Q QRE A+ + K +LVAT VA RG+DI+ + V+NYD+ + I++Y+HRI
Sbjct: 674 TLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRI 733
Query: 607 GRTGRVGNKGRATSFYDPDQDGAIAKDLVR-ILEQAGQPVPEFLK 650
GRTGR G G A +F + D A+ +L + ILE +P L+
Sbjct: 734 GRTGRAGKSGVAITFLTKE-DSAVFYELKQAILESPVSAIPPALE 777
Score = 164 (62.8 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ GC I++AT GRL D+L+ + L+ +VVLDEADRM+DMGF D+Q +++H MP V
Sbjct: 516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP-V 572
Query: 459 ANRQTLMFSATFPETIQKNY 478
+N++ A PE + N+
Sbjct: 573 SNQKPDTDEAEDPEKMLANF 592
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 426 (155.0 bits), Expect = 3.4e-51, Sum P(2) = 3.4e-51
Identities = 104/266 (39%), Positives = 153/266 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
KKG +I+VAT GRL D L+ G I+L +VV+DEADR+LDMGF ++ +M
Sbjct: 475 KKGADIIVATPGRLLDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNK--- 531
Query: 459 ANRQTLMFSATFPETIQK-NYIFIA---VGI-IGG----ASTDVVQT-ILEVPXXXXXXX 508
N+Q L +AT+PE ++K Y F + V I IG A+ ++ Q I+
Sbjct: 532 -NKQLLFLTATWPEQVRKLAYDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKL 590
Query: 509 XXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
+ + +++F T RN D + L + SIHG + Q +R++ ++++KT +
Sbjct: 591 LDWLKENYENNKILIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDR 650
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD--- 625
+LVAT VASRGLDIK I VINYD+P I++Y+HRIGRTGR G KG++ F+ D
Sbjct: 651 CNILVATDVASRGLDIKNISVVINYDIPNTIEDYIHRIGRTGRAGKKGKSILFFSYDYYM 710
Query: 626 -QDGAIAKDLVRILEQAGQPVPEFLK 650
Q AK+L+++L + Q VP LK
Sbjct: 711 PQKLKFAKELIKLLNKTNQTVPPQLK 736
Score = 212 (79.7 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 47/122 (38%), Positives = 71/122 (58%)
Query: 278 IICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKD 337
+I PTREL +Q+ + + + +K YGG + L+KG +I+VAT GRL D
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 490
Query: 338 ILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETI 397
L+ G I+L +VV+DEADR+LDMGF ++ +M N+Q L +AT+PE +
Sbjct: 491 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNK----NKQLLFLTATWPEQV 546
Query: 398 QK 399
+K
Sbjct: 547 RK 548
Score = 136 (52.9 bits), Expect = 3.4e-51, Sum P(2) = 3.4e-51
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
I F E ++ N + +++PT IQK P L G+DL+G A+TGSGKT AF++P
Sbjct: 287 INKFSDVCFHESIL-NYLNNKFSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPC 345
Query: 257 MHHLLE 262
H+L+
Sbjct: 346 FMHILK 351
Score = 41 (19.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 325 CNILVATMGRLKDILDRGRISLASVRFVV 353
CNILVAT D+ RG + + ++ V+
Sbjct: 651 CNILVAT-----DVASRG-LDIKNISVVI 673
Score = 40 (19.1 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 18/68 (26%), Positives = 26/68 (38%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPP--RPIESFESAGLREILVKN 212
++ VD DN + + IN +NV S DN R + G V+N
Sbjct: 112 HVDNHVDNHVDNHVDNHMDNHINNHTHKNVHDDTSYDNNSFDRYQRKRDEIG-ENGFVQN 170
Query: 213 LKKSNYTK 220
+ NY K
Sbjct: 171 RRYENYEK 178
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 349 (127.9 bits), Expect = 8.4e-51, Sum P(2) = 8.4e-51
Identities = 81/203 (39%), Positives = 119/203 (58%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+ +F L E L++ L+ +T+PT IQ AIP L+GRD++G A TG+GKTAA+L+P
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPA 62
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMH 316
+ HLL+ P + +G P ++I PTREL MQ+ + A + A + L I GG + M+
Sbjct: 63 LQHLLDFPRKK-SG---PPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMN 118
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
+ +I+VAT GRL + +V ++LDEADRMLDMGF DI+H+ +
Sbjct: 119 HAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGET 178
Query: 377 TMPDVANRQTLMFSATFP-ETIQ 398
+QTL+FSAT + IQ
Sbjct: 179 RW----RKQTLLFSATLEGDAIQ 197
Score = 203 (76.5 bits), Expect = 8.4e-51, Sum P(2) = 8.4e-51
Identities = 46/119 (38%), Positives = 66/119 (55%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVFV +A +L E I + G +Q +R +AI ++ VLVAT VA+RG
Sbjct: 252 IVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARG 311
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQ 640
+DI + HV N+D+P+ D Y+HRIGRT R G KG A S + D + + R +E+
Sbjct: 312 IDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEA-HDHLLLGKVGRYIEE 369
Score = 141 (54.7 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 45/142 (31%), Positives = 69/142 (48%)
Query: 335 LKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFP 394
L+ +LD R R ++L R L M + + +H+ + D+A +
Sbjct: 63 LQHLLDFPRKKSGPPRILILTPT-RELAMQVSDHARELAKHTHL-DIATITGGVAYMNHA 120
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
E + +I+VAT GRL + +V ++LDEADRMLDMGF DI+H+ +
Sbjct: 121 EVFSENQ-DIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETR 179
Query: 455 MPDVANRQTLMFSATFP-ETIQ 475
+QTL+FSAT + IQ
Sbjct: 180 W----RKQTLLFSATLEGDAIQ 197
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 331 (121.6 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 72/194 (37%), Positives = 111/194 (57%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + G + P P+ S++ +GL + L++ + + Y +PTPIQ+ AIP ++ RDL+G
Sbjct: 330 EDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGV 389
Query: 242 AQTGSGKTAAFLIPIMHHLLESP--GELVTGYCAQPEVIICAPTRELVMQIHEVACKYAY 299
A TGSGKTAAFL+P++ ++ E P E P I+ APTREL QI A K+
Sbjct: 390 AVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTE 449
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
+ GG S L G I++AT GRL D ++R + L+ +V++DEADR
Sbjct: 450 PLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADR 509
Query: 360 MLDMGFLGDIQHVM 373
M+D+GF + ++
Sbjct: 510 MIDLGFEEPVNKIL 523
Score = 257 (95.5 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 69/200 (34%), Positives = 107/200 (53%)
Query: 461 RQTLMFSATFP---ETIQKNYIFI-AVGIIG--GASTDVVQTILEVPXXXXXXXXXXXXX 514
RQT+M++AT P E I + Y+ A+ IG G + D V+ +E+
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLGEI 614
Query: 515 XXDED---GVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
D +IVFV+ RN D IA + + ++ ++HGS+ Q QRE A+ + V
Sbjct: 615 LSSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDV 674
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT +A RG+D+ + VIN+++ I+ Y HRIGRTGR G G A +F ++D +
Sbjct: 675 LVATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLG-NEDADVM 733
Query: 632 KDLVRILEQAG-QPVPEFLK 650
DL ++L ++ VPE L+
Sbjct: 734 YDLKQMLIKSPISRVPEELR 753
Score = 115 (45.5 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 450
+ G I++AT GRL D ++R + L+ +V++DEADRM+D+GF + ++
Sbjct: 472 RNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKIL 523
Score = 49 (22.3 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 384 RQTLMFSATFPETIQKKGCNIL----VATMGRLKDILD 417
RQT+M++AT P +++ L + T+G + +D
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVD 592
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 459 (166.6 bits), Expect = 5.4e-47, Sum P(2) = 5.4e-47
Identities = 111/259 (42%), Positives = 156/259 (60%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +I+VAT GRL DIL+ RISL V ++VLDEADRMLDMGF I+ ++ +P
Sbjct: 349 ERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNE--VP-- 404
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGG--ASTDVVQTILEVPXXXXXXXX 509
RQTLM++AT+P+ ++K N + +G + A+ + QTI EV
Sbjct: 405 TKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTI-EVLAPMEKHSR 463
Query: 510 XXXXXXXDEDG--VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G +I+F ST R D +A L T +IHG + Q++R+ ++ F++
Sbjct: 464 LEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSG 522
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
+ VLVAT VA+RGLD+K IR V+NYD P +++YVHRIGRTGR G G A +F+ DQD
Sbjct: 523 RTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFG-DQD 581
Query: 628 GAIAKDLVRILEQAGQPVP 646
A DL++ILE A Q VP
Sbjct: 582 AKHASDLIKILEGANQKVP 600
Score = 356 (130.4 bits), Expect = 9.7e-32, Sum P(2) = 9.7e-32
Identities = 79/191 (41%), Positives = 118/191 (61%)
Query: 216 SNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQP 275
+ ++ P+PIQ + P ++ RD++ A+TGSGKT +LIP HL + G P
Sbjct: 247 AGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMG----P 302
Query: 276 EVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRL 335
+++ +PTREL QI A K+ SS + YGGA +++E+G +I+VAT GRL
Sbjct: 303 TILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRL 362
Query: 336 KDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
DIL+ RISL V ++VLDEADRMLDMGF I+ ++ +P RQTLM++AT+P+
Sbjct: 363 NDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNE--VP--TKRQTLMYTATWPK 418
Query: 396 TIQKKGCNILV 406
++K ++LV
Sbjct: 419 EVRKIAADLLV 429
Score = 58 (25.5 bits), Expect = 5.4e-47, Sum P(2) = 5.4e-47
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 185 EVKVSGDNPPRPIESFESAGL-REIL 209
E+ VSG P P+ SFE+ GL E+L
Sbjct: 148 EITVSGGQVPPPLMSFEATGLPNELL 173
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 344 (126.2 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 85/223 (38%), Positives = 132/223 (59%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLK-KSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
+KV G + PRPI + L L + K + KP+ IQ A+P L GRD++G A+T
Sbjct: 281 IKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKT 340
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAY-SSVL 303
GSGKT ++++P++ H+ + + + P +I +PTREL +QI + + ++ L
Sbjct: 341 GSGKTLSYVLPMLRHIQD---QQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNL 397
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRI-SLASVRFVVLDEADRM 360
++C YGG+S + +L+KG I+V T GR+ D+L + GR+ +L FVVLDEADRM
Sbjct: 398 RVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRM 457
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFP---ETIQKK 400
D+GF + ++ PD RQT++FSATFP ET+ K+
Sbjct: 458 FDLGFEPQVNKILTQ-IRPD---RQTVLFSATFPRKMETLAKQ 496
Score = 217 (81.4 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 44/121 (36%), Positives = 73/121 (60%)
Query: 521 VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK--MKVLVATAVA 578
++VF +AD + L + +IHG + Q R+ AI +F + + +L+AT++A
Sbjct: 557 ILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIA 616
Query: 579 SRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRIL 638
+RGLD++ + VIN+D P +++YVHR+GRTGR G KG A +F Q + +LV+ L
Sbjct: 617 ARGLDVRNLGLVINFDPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVF-NLVKAL 675
Query: 639 E 639
+
Sbjct: 676 K 676
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 73/243 (30%), Positives = 108/243 (44%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
KKG I+V T GR+ D+L + GR+ +L FVVLDEADRM D+GF + ++
Sbjct: 416 KKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQ-IR 474
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGII-GGAST---DVVQTILEVPXXXXXXX 508
PD RQT++FSATFP ET+ K + V II GG S ++ Q ++
Sbjct: 475 PD---RQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVAPEIKQEVVLFETSAEEQD 531
Query: 509 X-------------XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQS 555
+ ++VF +AD + L + +IHG + Q
Sbjct: 532 KYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQM 591
Query: 556 QREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNK 615
R+ AI +F + + + A + + +G+ V N L D H RVG
Sbjct: 592 DRKYAIKEFASMDSGINILIATS---IAARGL-DVRNLGLVINFDPPNHMEDYVHRVGRT 647
Query: 616 GRA 618
GRA
Sbjct: 648 GRA 650
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 344 (126.2 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 85/223 (38%), Positives = 132/223 (59%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLK-KSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
+KV G + PRPI + L L + K + KP+ IQ A+P L GRD++G A+T
Sbjct: 281 IKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKT 340
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAY-SSVL 303
GSGKT ++++P++ H+ + + + P +I +PTREL +QI + + ++ L
Sbjct: 341 GSGKTLSYVLPMLRHIQD---QQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNL 397
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRI-SLASVRFVVLDEADRM 360
++C YGG+S + +L+KG I+V T GR+ D+L + GR+ +L FVVLDEADRM
Sbjct: 398 RVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRM 457
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFP---ETIQKK 400
D+GF + ++ PD RQT++FSATFP ET+ K+
Sbjct: 458 FDLGFEPQVNKILTQ-IRPD---RQTVLFSATFPRKMETLAKQ 496
Score = 217 (81.4 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 44/121 (36%), Positives = 73/121 (60%)
Query: 521 VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK--MKVLVATAVA 578
++VF +AD + L + +IHG + Q R+ AI +F + + +L+AT++A
Sbjct: 557 ILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIA 616
Query: 579 SRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRIL 638
+RGLD++ + VIN+D P +++YVHR+GRTGR G KG A +F Q + +LV+ L
Sbjct: 617 ARGLDVRNLGLVINFDPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVF-NLVKAL 675
Query: 639 E 639
+
Sbjct: 676 K 676
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 73/243 (30%), Positives = 108/243 (44%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
KKG I+V T GR+ D+L + GR+ +L FVVLDEADRM D+GF + ++
Sbjct: 416 KKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQ-IR 474
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGII-GGAST---DVVQTILEVPXXXXXXX 508
PD RQT++FSATFP ET+ K + V II GG S ++ Q ++
Sbjct: 475 PD---RQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVAPEIKQEVVLFETSAEEQD 531
Query: 509 X-------------XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQS 555
+ ++VF +AD + L + +IHG + Q
Sbjct: 532 KYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQM 591
Query: 556 QREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNK 615
R+ AI +F + + + A + + +G+ V N L D H RVG
Sbjct: 592 DRKYAIKEFASMDSGINILIATS---IAARGL-DVRNLGLVINFDPPNHMEDYVHRVGRT 647
Query: 616 GRA 618
GRA
Sbjct: 648 GRA 650
>DICTYBASE|DDB_G0292010 [details] [associations]
symbol:DDB_G0292010 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292010 GO:GO:0005524
EMBL:AAFI02000187 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
ProtClustDB:CLSZ2846571 RefSeq:XP_629765.1
ProteinModelPortal:Q54DV7 EnsemblProtists:DDB0184159 GeneID:8628441
KEGG:ddi:DDB_G0292010 InParanoid:Q54DV7 OMA:VESSCKP Uniprot:Q54DV7
Length = 777
Score = 261 (96.9 bits), Expect = 3.8e-46, Sum P(3) = 3.8e-46
Identities = 57/140 (40%), Positives = 88/140 (62%)
Query: 521 VIVFVSTIRNADFIACYL---C----ETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
+++FV+TI++ I + C E + +IHG Q +R+ I +FK+ K+ +LV
Sbjct: 578 ILIFVNTIKSVKPILTVIEKMCDQFRERKYKCGAIHGDMKQFERDSVIDNFKSGKISILV 637
Query: 574 ATAVASRGLDIKG-IRHVINYDLPQEIDEYVHRIGRTGRVGNKGRA-TSFYDPDQDGAIA 631
AT + RG+ I G +R VINYD P +++YVHR+GRTGR GNKG A T F D Q+ +A
Sbjct: 638 ATDILGRGIHIGGNLRFVINYDFPSSLEQYVHRVGRTGRQGNKGHALTLFTDTPQNTPMA 697
Query: 632 KDLVRILEQAGQPV-PEFLK 650
+ L++ILE+ Q + P+ +K
Sbjct: 698 RGLIKILEECKQQISPDLIK 717
Score = 204 (76.9 bits), Expect = 3.8e-46, Sum P(3) = 3.8e-46
Identities = 73/211 (34%), Positives = 108/211 (51%)
Query: 275 PEVIICAPTRELVMQIHEVACKYAYS--SVLKICLHYGGASSMHFNRQLEKGCN-ILVAT 331
P V+I PTREL Q+ E +CK S ++ I + YGG + L + N I++AT
Sbjct: 387 PMVLIIVPTRELAKQV-ESSCKPLRSKFNIHSIAI-YGGVDANEQKDILGQEHNEIIIAT 444
Query: 332 MGRLKDILDRGR--ISL-ASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLM 388
GRL D++ R + + L V ++LDEADRML +GF GD + PD RQTLM
Sbjct: 445 PGRLVDLIQRSKEVVGLLGGVGMLILDEADRMLQLGF-GDQLQKISEQIRPD---RQTLM 500
Query: 389 FSATFPETIQKKGCNILVATMG-RLKDI-LDRGRISLAS--VRFVVLDEADRMLDMGFLG 444
FSATFP+T+Q L + R+K ++G S+ S V+ VV A++
Sbjct: 501 FSATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGSTSIISKNVKQVVKPIAEKEKSKYLTT 560
Query: 445 DIQHVMQHSTMPDVANRQTLMFSATFPETIQ 475
I +M+ + + NR ++ F TI+
Sbjct: 561 FINSIMKKELL--LRNRSLILI---FVNTIK 586
Score = 143 (55.4 bits), Expect = 3.8e-46, Sum P(3) = 3.8e-46
Identities = 33/85 (38%), Positives = 46/85 (54%)
Query: 183 NVEVKVSGDNPPRPIESFESAGLREILVKNL-----KKSNYTKPTPIQKYAIPAGLEGRD 237
NV G PRPI +FE L + K + K + T PTP+Q P L G+D
Sbjct: 269 NVSTSFDGQEIPRPIITFEDQDLPLSMKKFIGFLTTKYPSITAPTPVQSQCWPGILSGQD 328
Query: 238 LMGCAQTGSGKTAAFLIPIMHHLLE 262
++ AQTGSGKT +L+P + ++LE
Sbjct: 329 ILSIAQTGSGKTLGYLLPAIPNILE 353
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 338 (124.0 bits), Expect = 6.6e-45, Sum P(2) = 6.6e-45
Identities = 78/200 (39%), Positives = 117/200 (58%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF+S L ++K L + PT IQ IP L G+D++G A TGSGKTAAF++PI+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 259 HLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFN 318
LL P ++ T V+I PTREL MQ H VA K A + + +CL GG S
Sbjct: 320 RLLYRPKKVPT-----TRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQE 374
Query: 319 RQLEKGCNILVATMGRLKDILDRGR-ISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
++L K +I++AT GR D + + ++ ++ +V+DEADRML+ GF ++ ++Q
Sbjct: 375 QELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQ--A 432
Query: 378 MPDVANRQTLMFSATFPETI 397
P +RQT++FSAT + +
Sbjct: 433 CPK--SRQTMLFSATMTDKV 450
Score = 206 (77.6 bits), Expect = 6.6e-45, Sum P(2) = 6.6e-45
Identities = 41/73 (56%), Positives = 50/73 (68%)
Query: 546 TSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHR 605
T IHGS Q QR +A+ DF+ K L+AT VASRG+DIKGI VINY+ P + Y+HR
Sbjct: 532 TEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHR 591
Query: 606 IGRTGRVGNKGRA 618
+GRT R G GRA
Sbjct: 592 VGRTARAGRSGRA 604
Score = 115 (45.5 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 399 KKGCNILVATMGRLKDILDRGR-ISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPD 457
+K +I++AT GR D + + ++ ++ +V+DEADRML+ GF ++ ++Q P
Sbjct: 378 RKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQ--ACPK 435
Query: 458 VANRQTLMFSATFPETI 474
+RQT++FSAT + +
Sbjct: 436 --SRQTMLFSATMTDKV 450
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 306 (112.8 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 73/196 (37%), Positives = 110/196 (56%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
I++F L IL++ +++ +++PT +Q AIP L+GRD++ A TG+GKTAAF+IP
Sbjct: 2 IKTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPA 61
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMH 316
+ +LL+ P ++I PTREL MQ+ E A A ++ L I GG
Sbjct: 62 LQYLLDFPRRKA----GPARILILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQE 117
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
L +I+VAT GRL + +D R ++ +++LDEADRMLDMGF + +
Sbjct: 118 HADILATTQDIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTEC 177
Query: 377 TMPDVANRQTLMFSAT 392
+QTL+FSAT
Sbjct: 178 RW----RKQTLLFSAT 189
Score = 208 (78.3 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 45/111 (40%), Positives = 63/111 (56%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVF+ T + L + +I I G Q +R AI F+ + +L+AT VA+RG
Sbjct: 250 IVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNILLATDVAARG 309
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAK 632
+D+ I HVIN+DLP+ D Y+HRIGRTGR G KG A S + +A+
Sbjct: 310 IDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQPMMAR 360
Score = 124 (48.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 403 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 462
+I+VAT GRL + +D R ++ +++LDEADRMLDMGF + + +Q
Sbjct: 127 DIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTECRW----RKQ 182
Query: 463 TLMFSAT 469
TL+FSAT
Sbjct: 183 TLLFSAT 189
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 306 (112.8 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 73/196 (37%), Positives = 110/196 (56%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
I++F L IL++ +++ +++PT +Q AIP L+GRD++ A TG+GKTAAF+IP
Sbjct: 2 IKTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPA 61
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMH 316
+ +LL+ P ++I PTREL MQ+ E A A ++ L I GG
Sbjct: 62 LQYLLDFPRRKA----GPARILILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQE 117
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
L +I+VAT GRL + +D R ++ +++LDEADRMLDMGF + +
Sbjct: 118 HADILATTQDIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTEC 177
Query: 377 TMPDVANRQTLMFSAT 392
+QTL+FSAT
Sbjct: 178 RW----RKQTLLFSAT 189
Score = 208 (78.3 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 45/111 (40%), Positives = 63/111 (56%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVF+ T + L + +I I G Q +R AI F+ + +L+AT VA+RG
Sbjct: 250 IVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNILLATDVAARG 309
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAK 632
+D+ I HVIN+DLP+ D Y+HRIGRTGR G KG A S + +A+
Sbjct: 310 IDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQPMMAR 360
Score = 124 (48.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 403 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 462
+I+VAT GRL + +D R ++ +++LDEADRMLDMGF + + +Q
Sbjct: 127 DIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTECRW----RKQ 182
Query: 463 TLMFSAT 469
TL+FSAT
Sbjct: 183 TLLFSAT 189
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 112/259 (43%), Positives = 151/259 (58%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ G +I+VAT GRL D+L + I+L R++VLDEADRMLDMGF +I+ +
Sbjct: 320 RDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFK---- 375
Query: 459 ANRQTLMFSATFPETIQ---KNY----IFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
A RQTL+FSAT P IQ K+ I + VG G AS +V+Q LE
Sbjct: 376 AQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQE-LEFVRSENKLVRVL 434
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
V++F + D I YL + SIHG + QS R I F+ + V
Sbjct: 435 ECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDV 494
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT VAS+GLD +GI HVIN+D+P++I+ YVHRIGRTGR G KG AT+F + + ++
Sbjct: 495 LVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVL 554
Query: 632 KDLVRILEQAGQPVPEFLK 650
DL ++L +AGQ +PEFLK
Sbjct: 555 SDLKQLLAEAGQELPEFLK 573
Score = 320 (117.7 bits), Expect = 6.2e-26, P = 6.2e-26
Identities = 98/280 (35%), Positives = 141/280 (50%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSN-YTKPTPIQKYAIPAGLEGRDLMGCAQT 244
+ GD+ P PI SF + L++ ++K PT IQ IP L GRD++G A T
Sbjct: 177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIAST 236
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEV------ACKYA 298
GSGKT F++P++ LE +L P +I P+REL QI ++ A A
Sbjct: 237 GSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKA 296
Query: 299 YSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEAD 358
++ L GG + + G +I+VAT GRL D+L + I+L R++VLDEAD
Sbjct: 297 GLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEAD 356
Query: 359 RMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDR 418
RMLDMGF +I+ + A RQTL+FSAT P IQ + LV + +++
Sbjct: 357 RMLDMGFEDEIKSIFYFFK----AQRQTLLFSATMPRKIQFFAKSALVKPI-----VVNV 407
Query: 419 GRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
GR AS+ VL E + + L + +Q T P V
Sbjct: 408 GRAGAASLN--VLQELEFVRSENKLVRVLECLQ-KTSPKV 444
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 115/264 (43%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ETI K G +++VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 304 ETI-KHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 362
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ I I VG G AS DVVQ + E
Sbjct: 363 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPITINVGRAGAASLDVVQEV-EYVKEEAK 416
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 417 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRD 476
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 477 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 536
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 537 DESVLMDLKALLLEAKQKVPPVLQ 560
Score = 364 (133.2 bits), Expect = 3.8e-31, P = 3.8e-31
Identities = 88/227 (38%), Positives = 122/227 (53%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V G+ P PI+SF+ +++ LKK +PTPIQ IP L GRD++G A TG
Sbjct: 165 ILVEGEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTG 224
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAYSSV 302
SGKT F +P++ LE L P +I P+REL Q H E C+
Sbjct: 225 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGIIEYYCRLLQEDS 284
Query: 303 L---KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
L + L GG S ++ G +++VAT GRL D+L + +SL R++ LDEADR
Sbjct: 285 LPPLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADR 344
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 345 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 387
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/264 (42%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ET+ + G +I+VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 307 ETM-RHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 365
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ + I VG G AS DV+Q + E
Sbjct: 366 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPVTINVGRAGAASLDVIQEV-EYVKEEAK 419
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 420 MVYLLECLQKTPPPVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE 479
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 480 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 539
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 540 DESVLMDLKALLLEAKQKVPPVLQ 563
Score = 377 (137.8 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 94/227 (41%), Positives = 123/227 (54%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V GD P PI+SF+ L +++ LKK PTPIQ IP L GRD++G A TG
Sbjct: 168 ILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTG 227
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAY--S 300
SGKT F +P++ LE L P +I P+REL Q H E C+ S
Sbjct: 228 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 287
Query: 301 SVLKIC-LHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S L C L GG S + G +I+VAT GRL D+L + +SL R++ LDEADR
Sbjct: 288 SPLLHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADR 347
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 348 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 390
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/264 (42%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ETI + G +++VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 308 ETI-RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 366
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ + I VG G AS DV+Q + E
Sbjct: 367 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPVTINVGRAGAASLDVIQEV-EYVKEEAK 420
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 421 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE 480
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 481 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 540
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 541 DESVLMDLKALLLEAKQKVPPVLQ 564
Score = 375 (137.1 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 91/227 (40%), Positives = 123/227 (54%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V GD P PI+SF+ L +++ LKK PTPIQ IP L GRD++G A TG
Sbjct: 169 ILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTG 228
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAY--- 299
SGKT F +P++ LE L P +I P+REL Q H E C+
Sbjct: 229 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 288
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S +L+ L GG S + G +++VAT GRL D+L + +SL R++ LDEADR
Sbjct: 289 SPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADR 348
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 349 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 391
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/264 (42%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ETI + G +++VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 308 ETI-RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 366
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ + I VG G AS DV+Q + E
Sbjct: 367 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPVTINVGRAGAASLDVIQEV-EYVKEEAK 420
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 421 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE 480
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 481 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 540
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 541 DESVLMDLKALLLEAKQKVPPVLQ 564
Score = 371 (135.7 bits), Expect = 6.1e-32, P = 6.1e-32
Identities = 90/227 (39%), Positives = 122/227 (53%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V GD P PI+SF+ +++ LKK PTPIQ IP L GRD++G A TG
Sbjct: 169 ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTG 228
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAY--- 299
SGKT F +P++ LE L P +I P+REL Q H E C+
Sbjct: 229 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 288
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S +L+ L GG S + G +++VAT GRL D+L + +SL R++ LDEADR
Sbjct: 289 SPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADR 348
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 349 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 391
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/264 (42%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ETI + G +++VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 308 ETI-RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 366
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ + I VG G AS DV+Q + E
Sbjct: 367 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPVTINVGRAGAASLDVIQEV-EYVKEEAK 420
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 421 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE 480
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 481 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 540
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 541 DESVLMDLKALLLEAKQKVPPVLQ 564
Score = 370 (135.3 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 90/227 (39%), Positives = 122/227 (53%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V GD P PI+SF+ +++ LKK PTPIQ IP L GRD++G A TG
Sbjct: 169 ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTG 228
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAY--- 299
SGKT F +P++ LE L P +I P+REL Q H E C+
Sbjct: 229 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 288
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S +L+ L GG S + G +++VAT GRL D+L + +SL R++ LDEADR
Sbjct: 289 SPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADR 348
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 349 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 391
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/264 (42%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ETI + G +++VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 308 ETI-RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 366
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ + I VG G AS DV+Q + E
Sbjct: 367 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPVTINVGRAGAASLDVIQEV-EYVKEEAK 420
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 421 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE 480
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 481 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 540
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 541 DESVLMDLKALLLEAKQKVPPVLQ 564
Score = 370 (135.3 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 90/227 (39%), Positives = 122/227 (53%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V GD P PI+SF+ +++ LKK PTPIQ IP L GRD++G A TG
Sbjct: 169 ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTG 228
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAY--- 299
SGKT F +P++ LE L P +I P+REL Q H E C+
Sbjct: 229 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 288
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S +L+ L GG S + G +++VAT GRL D+L + +SL R++ LDEADR
Sbjct: 289 SPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADR 348
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 349 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 391
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/264 (42%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ETI + G +++VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 335 ETI-RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 393
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ + I VG G AS DV+Q + E
Sbjct: 394 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPVTINVGRAGAASLDVIQEV-EYVKEEAK 447
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 448 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE 507
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 508 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 567
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 568 DESVLMDLKALLLEAKQKVPPVLQ 591
Score = 370 (135.3 bits), Expect = 9.9e-32, P = 9.9e-32
Identities = 90/227 (39%), Positives = 122/227 (53%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V GD P PI+SF+ +++ LKK PTPIQ IP L GRD++G A TG
Sbjct: 196 ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTG 255
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAY--- 299
SGKT F +P++ LE L P +I P+REL Q H E C+
Sbjct: 256 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 315
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S +L+ L GG S + G +++VAT GRL D+L + +SL R++ LDEADR
Sbjct: 316 SPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADR 375
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 376 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 418
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/264 (42%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ETI + G +++VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 326 ETI-RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 384
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ + I VG G AS DV+Q + E
Sbjct: 385 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPVTINVGRAGAASLDVIQEV-EYVKEEAK 438
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 439 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE 498
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 499 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 558
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 559 DESVLMDLKALLLEAKQKVPPVLQ 582
Score = 370 (135.3 bits), Expect = 9.3e-32, P = 9.3e-32
Identities = 90/227 (39%), Positives = 122/227 (53%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V GD P PI+SF+ +++ LKK PTPIQ IP L GRD++G A TG
Sbjct: 187 ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTG 246
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAY--- 299
SGKT F +P++ LE L P +I P+REL Q H E C+
Sbjct: 247 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 306
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S +L+ L GG S + G +++VAT GRL D+L + +SL R++ LDEADR
Sbjct: 307 SPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADR 366
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 367 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 409
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/264 (42%), Positives = 152/264 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ETI + G +++VAT GRL D+L + +SL R++ LDEADRM+DMGF GDI+ + +
Sbjct: 308 ETI-RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 366
Query: 455 MPDVANRQTLMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXX 506
RQTL+FSAT P+ IQ N+ + I VG G AS DV+Q + E
Sbjct: 367 ----GQRQTLLFSATMPKKIQ-NFAKSALVKPVTINVGRAGAASLDVIQEV-EYVKEEAK 420
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
V++F + D I YL + +IHG + Q +R +AI F+
Sbjct: 421 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE 480
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K VLVAT VAS+GLD I+HVINYD+P+EI+ YVHRIGRTGR GN G AT+F +
Sbjct: 481 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC 540
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
D ++ DL +L +A Q VP L+
Sbjct: 541 DESVLMDLKALLLEAKQKVPPVLQ 564
Score = 370 (135.3 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 90/227 (39%), Positives = 122/227 (53%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V GD P PI+SF+ +++ LKK PTPIQ IP L GRD++G A TG
Sbjct: 169 ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTG 228
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIH---EVACKYAY--- 299
SGKT F +P++ LE L P +I P+REL Q H E C+
Sbjct: 229 SGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 288
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S +L+ L GG S + G +++VAT GRL D+L + +SL R++ LDEADR
Sbjct: 289 SPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADR 348
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
M+DMGF GDI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 349 MIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 391
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 110/260 (42%), Positives = 147/260 (56%)
Query: 397 IQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 456
+ KKG +I+VAT GRLKDIL + ++SL + R + LDEADR++D+GF DI+HV H
Sbjct: 225 VVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFK-- 282
Query: 457 DVANRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXX 509
+ RQTL+FSAT P IQ + + VG G A+ DV+Q + E
Sbjct: 283 --SQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEV-EYVKQEAKIVY 339
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++F + D I YL + +IHG + Q R+ AI FK K
Sbjct: 340 LLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKK 399
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VAS+GLD I+HVINYD+P EI+ YVHRIGRTGR G G AT+F + +Q
Sbjct: 400 DVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEI 459
Query: 630 IAKDLVRILEQAGQPVPEFL 649
DL +L++A Q +P L
Sbjct: 460 TLLDLKHLLQEAKQRIPPVL 479
Score = 356 (130.4 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 97/280 (34%), Positives = 152/280 (54%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V+G++ P PI++F L++ LK PTPIQ +P L GRD++G A TG
Sbjct: 85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTG 144
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQ--PEVIICAPTRELVMQIHEVACKYAYSSV- 302
SGKT F++P++ +L E++ A P ++ P+REL Q ++V ++ S V
Sbjct: 145 SGKTLVFVLPMI--ILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVE 202
Query: 303 -----LKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEA 357
L+ L GG ++KG +I+VAT GRLKDIL + ++SL + R + LDEA
Sbjct: 203 DGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEA 262
Query: 358 DRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDI-L 416
DR++D+GF DI+HV H + RQTL+FSAT P IQ + AT +K + +
Sbjct: 263 DRLVDLGFEDDIRHVFDHFK----SQRQTLLFSATMPAKIQ------IFATSALVKPVTV 312
Query: 417 DRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 456
+ GR A++ V+ E + + + + +Q +T P
Sbjct: 313 NVGRAGAANLD--VIQEVEYVKQEAKIVYLLECLQKTTPP 350
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 105/259 (40%), Positives = 154/259 (59%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +I++AT GRL D+ ++L S+ ++VLDEAD+MLD+GF I ++ PD
Sbjct: 346 KGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILL-DVRPD-- 402
Query: 460 NRQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQT--ILEVPXXXXXXXXX 510
RQT+M SAT+P+TI++ +Y+ + VG + + D V+ I+
Sbjct: 403 -RQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQE 461
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D VIVFVS AD ++ L I S+HG R QS RE+A+ DFKT K+K
Sbjct: 462 FLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVK 521
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+L+AT +ASRGLD+ + HV NY+ P+ I+EYVHR+GRTGR G G + + D D +
Sbjct: 522 ILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQD-DWKV 580
Query: 631 AKDLVRILEQAGQPVPEFL 649
A +L+ IL++A Q +PE L
Sbjct: 581 AGELIEILQRANQSIPEDL 599
Score = 396 (144.5 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 100/270 (37%), Positives = 150/270 (55%)
Query: 177 NFSGWENVEVKVSGDNP-PRPIESFESA-GLREILVKNLKKSNYTKPTPIQKYAIPAGLE 234
NF+ N ++K P P PI FE A G L+K++KK+ + KPTPIQ A P L+
Sbjct: 202 NFNVMCN-DLKDGEKRPIPNPICKFEDAFGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQ 260
Query: 235 GRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVA 294
G DL+G AQTG+GKT ++L+P HL P + G P +++ PTREL +Q+
Sbjct: 261 GIDLIGIAQTGTGKTLSYLMPGFIHLNSQP--VSRGKRNGPGMLVLTPTRELALQVGAEC 318
Query: 295 CKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVL 354
KY+Y + +C+ YGG + + + KG +I++AT GRL D+ ++L S+ ++VL
Sbjct: 319 SKYSYKGLKSVCI-YGGGNRKGQIQDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVL 377
Query: 355 DEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKD 414
DEAD+MLD+GF I ++ PD RQT+M SAT+P+TI++ + L M
Sbjct: 378 DEADKMLDLGFEHQIMKILL-DVRPD---RQTIMTSATWPDTIRQLAHSYLKEPMLVYVG 433
Query: 415 ILDRGRISLASVRFVVLDEAD-RMLDMGFL 443
LD + ++ E + R L FL
Sbjct: 434 TLDLVAVDTVKQNIIITTEEEKRSLFQEFL 463
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 105/259 (40%), Positives = 154/259 (59%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +I++AT GRL D+ ++L S+ ++VLDEAD+MLD+GF I ++ PD
Sbjct: 337 KGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILL-DVRPD-- 393
Query: 460 NRQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQT--ILEVPXXXXXXXXX 510
RQT+M SAT+P+TI++ +Y+ + VG + + D V+ I+
Sbjct: 394 -RQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQE 452
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D VIVFVS AD ++ L I S+HG R QS RE+A+ DFKT K+K
Sbjct: 453 FLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVK 512
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+L+AT +ASRGLD+ + HV NY+ P+ I+EYVHR+GRTGR G G + + D D +
Sbjct: 513 ILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQD-DWKV 571
Query: 631 AKDLVRILEQAGQPVPEFL 649
A +L+ IL++A Q +PE L
Sbjct: 572 AGELIEILQRANQSIPEDL 590
Score = 396 (144.5 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 100/270 (37%), Positives = 150/270 (55%)
Query: 177 NFSGWENVEVKVSGDNP-PRPIESFESA-GLREILVKNLKKSNYTKPTPIQKYAIPAGLE 234
NF+ N ++K P P PI FE A G L+K++KK+ + KPTPIQ A P L+
Sbjct: 193 NFNVMCN-DLKDGEKRPIPNPICKFEDAFGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQ 251
Query: 235 GRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVA 294
G DL+G AQTG+GKT ++L+P HL P + G P +++ PTREL +Q+
Sbjct: 252 GIDLIGIAQTGTGKTLSYLMPGFIHLNSQP--VSRGKRNGPGMLVLTPTRELALQVGAEC 309
Query: 295 CKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVL 354
KY+Y + +C+ YGG + + + KG +I++AT GRL D+ ++L S+ ++VL
Sbjct: 310 SKYSYKGLKSVCI-YGGGNRKGQIQDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVL 368
Query: 355 DEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKD 414
DEAD+MLD+GF I ++ PD RQT+M SAT+P+TI++ + L M
Sbjct: 369 DEADKMLDLGFEHQIMKILL-DVRPD---RQTIMTSATWPDTIRQLAHSYLKEPMLVYVG 424
Query: 415 ILDRGRISLASVRFVVLDEAD-RMLDMGFL 443
LD + ++ E + R L FL
Sbjct: 425 TLDLVAVDTVKQNIIITTEEEKRSLFQEFL 454
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 108/260 (41%), Positives = 147/260 (56%)
Query: 397 IQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 456
+ K+G +I+VAT GRLKD+L + ++SL + R++ LDEADR++D+GF DI+ V H
Sbjct: 274 VVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFK-- 331
Query: 457 DVANRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXX 509
+ RQTL+FSAT P IQ + + VG G A+ DV+Q + E
Sbjct: 332 --SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEV-EYVKQEAKIVY 388
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++F + D I YL + +IHG + Q RE AI FK K
Sbjct: 389 LLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKK 448
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VAS+GLD I+HVINYD+P EI+ YVHRIGRTGR G G AT+F + +Q
Sbjct: 449 DVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSET 508
Query: 630 IAKDLVRILEQAGQPVPEFL 649
DL +L++A Q +P L
Sbjct: 509 TLLDLKHLLQEAKQRIPPVL 528
Score = 342 (125.4 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 82/217 (37%), Positives = 124/217 (57%)
Query: 188 VSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSG 247
V+GD+ P PI++F+ ++ LK+ +PTPIQ +P L GRD++G A TGSG
Sbjct: 136 VNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSG 195
Query: 248 KTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSV----- 302
KT F++P++ L+ + P +I P+REL Q +EV ++ V
Sbjct: 196 KTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYP 255
Query: 303 -LKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRML 361
L+ L GG +++G +I+VAT GRLKD+L + ++SL + R++ LDEADR++
Sbjct: 256 PLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLV 315
Query: 362 DMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
D+GF DI+ V H + RQTL+FSAT P IQ
Sbjct: 316 DLGFEDDIREVFDHFK----SQRQTLLFSATMPTKIQ 348
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 438 (159.2 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 104/259 (40%), Positives = 150/259 (57%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +I++AT GRL D+ + L S+ ++VLDEAD+MLDMGF I ++ PD
Sbjct: 363 KGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILL-DVRPD-- 419
Query: 460 NRQTLMFSATFPETIQK---NYI----FIAVGIIG--GASTDVVQTILEVPXXXXXXXXX 510
RQT+M SAT+P +++ +Y+ + VG + ST I+
Sbjct: 420 -RQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRSHIQA 478
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D VI+FVS AD ++ L I+ S+HG+R QS RE+A+ FKT K++
Sbjct: 479 FIDSMSPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVR 538
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+L+AT +ASRGLD+ + HV NYD P+ I+EYVHR+GRTGR G G + + + D I
Sbjct: 539 ILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRN-DWKI 597
Query: 631 AKDLVRILEQAGQPVPEFL 649
A +L+ ILE+A Q VPE L
Sbjct: 598 AGELINILERANQSVPEDL 616
Score = 361 (132.1 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 87/245 (35%), Positives = 137/245 (55%)
Query: 194 PRPIESFESAG--LREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAA 251
P P +FE A E++ +N++K+ + KPTPIQ A P L+G DL+G AQTG+GKT +
Sbjct: 236 PNPTCNFEDAFHCYPEVM-RNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLS 294
Query: 252 FLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGG 311
+L+P H+ P ++ P +++ PTREL +Q+ +Y+Y + +C+ YGG
Sbjct: 295 YLMPGFIHIDSQP--VLQRARNGPGMLVLTPTRELALQVDAECSEYSYRGLKSVCI-YGG 351
Query: 312 ASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQH 371
+ L KG +I++AT GRL D+ + L S+ ++VLDEAD+MLDMGF I
Sbjct: 352 GDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMK 411
Query: 372 VMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVL 431
++ PD RQT+M SAT+P +++ + L M LD +S + +V
Sbjct: 412 ILL-DVRPD---RQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVT 467
Query: 432 DEADR 436
E ++
Sbjct: 468 TEDEK 472
Score = 39 (18.8 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 177 NFSGWENVEVKVSGDNPPRP---IESFESAGLREILVKNLKKSNY 218
N W E K +G P + IES +++ + + V N +K NY
Sbjct: 178 NILKWN--EKKWAGLPPVKKNFYIESEKTSSMSQEQVDNWRKENY 220
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 443 (161.0 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 97/220 (44%), Positives = 139/220 (63%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
VKV+G +PP+P+ SF G E L+K ++K+ YT+PTPIQ A+P L GRD++G A+TG
Sbjct: 257 VKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTG 316
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKI 305
SGKTAAF+ P++ H+++ +L G P +I APTREL +QI+ A K+ L +
Sbjct: 317 SGKTAAFIWPMLMHVMDQK-QLKPG--DGPIGLILAPTRELSLQIYNEAKKFGKVYNLNV 373
Query: 306 CLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGF 365
YGG S ++ LE+G I+VAT GR+ D++ +L V F+VLDEADRM MGF
Sbjct: 374 VCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGF 433
Query: 366 LGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
++ + H PD RQ LMFSATF + I++ ++L
Sbjct: 434 EPQVRSICNH-VRPD---RQCLMFSATFKKRIERLARDVL 469
Score = 381 (139.2 bits), Expect = 8.7e-33, P = 8.7e-33
Identities = 99/260 (38%), Positives = 142/260 (54%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+VAT GR+ D++ +L V F+VLDEADRM MGF ++ + H PD
Sbjct: 390 EQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNH-VRPD- 447
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQ LMFSATF + I++ + + I G + A+ D+ Q++ P
Sbjct: 448 --RQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDITQSVYVFPNPLQKWNWLL 505
Query: 512 --XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
E V++FV+ +A+ ++ L E +HG Q+ R + I FK K+
Sbjct: 506 CHLVKFLSEGSVLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKEC 565
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+LVAT VA+RGLDI IR+V+NYD ++I+ + HRIGRTGR G KG A + D+D
Sbjct: 566 DILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAYTLVT-DKDKE 624
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A LVR LE A Q VP+ L
Sbjct: 625 FAGHLVRNLEGADQLVPDDL 644
Score = 43 (20.2 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 398 QKKGCNILVATMGRLKDILDRGRISLASVRFVV 430
++K C+ILVAT D+ RG + + +R VV
Sbjct: 561 KRKECDILVAT-----DVAARG-LDIPHIRNVV 587
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 111/263 (42%), Positives = 159/263 (60%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K+G +IL+A GRL D+L++ +L V ++VLDEAD+MLDMGF I+ ++ PD
Sbjct: 234 KQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQ-IRPD- 291
Query: 459 ANRQTLMFSATFPETIQ---KNY-----IFIAVGIIG-GASTDVVQTI--LEVPXXXXXX 507
RQTLM+SAT+P+ +Q K+ I + VG + A + Q I LE
Sbjct: 292 --RQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNL 349
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
D D +IVFV T +NADFI L + IHG + Q +R +++FKT
Sbjct: 350 KSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTG 409
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +++AT VASRGLDIK +++VIN+D P +I++YVHRIGRTGR G+ G + +F D+
Sbjct: 410 KSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKY 469
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
+AKDLV+IL ++ QPVP L+
Sbjct: 470 -RLAKDLVKILRESEQPVPPQLE 491
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 86/211 (40%), Positives = 127/211 (60%)
Query: 188 VSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSG 247
+ G+N P+P+ S G + ++K+LK +N PTPIQ P L G+D++G A+TGSG
Sbjct: 103 LEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSG 162
Query: 248 KTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICL 307
KT AF++P H+L P Y P V++ APTREL QI + K++ S ++
Sbjct: 163 KTLAFILPAFVHILAQPN---LKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTC 219
Query: 308 HYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLG 367
YGG L++G +IL+A GRL D+L++ +L V ++VLDEAD+MLDMGF
Sbjct: 220 AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEL 279
Query: 368 DIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
I+ ++ PD RQTLM+SAT+P+ +Q
Sbjct: 280 QIRKIVDQ-IRPD---RQTLMWSATWPKEVQ 306
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 111/263 (42%), Positives = 159/263 (60%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K+G +IL+A GRL D+L++ +L V ++VLDEAD+MLDMGF I+ ++ PD
Sbjct: 234 KQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQ-IRPD- 291
Query: 459 ANRQTLMFSATFPETIQ---KNY-----IFIAVGIIG-GASTDVVQTI--LEVPXXXXXX 507
RQTLM+SAT+P+ +Q K+ I + VG + A + Q I LE
Sbjct: 292 --RQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNL 349
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
D D +IVFV T +NADFI L + IHG + Q +R +++FKT
Sbjct: 350 KSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTG 409
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +++AT VASRGLDIK +++VIN+D P +I++YVHRIGRTGR G+ G + +F D+
Sbjct: 410 KSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKY 469
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
+AKDLV+IL ++ QPVP L+
Sbjct: 470 -RLAKDLVKILRESEQPVPPQLE 491
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 86/211 (40%), Positives = 127/211 (60%)
Query: 188 VSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSG 247
+ G+N P+P+ S G + ++K+LK +N PTPIQ P L G+D++G A+TGSG
Sbjct: 103 LEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSG 162
Query: 248 KTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICL 307
KT AF++P H+L P Y P V++ APTREL QI + K++ S ++
Sbjct: 163 KTLAFILPAFVHILAQPN---LKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTC 219
Query: 308 HYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLG 367
YGG L++G +IL+A GRL D+L++ +L V ++VLDEAD+MLDMGF
Sbjct: 220 AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEL 279
Query: 368 DIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
I+ ++ PD RQTLM+SAT+P+ +Q
Sbjct: 280 QIRKIVDQ-IRPD---RQTLMWSATWPKEVQ 306
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 458 (166.3 bits), Expect = 5.3e-43, P = 5.3e-43
Identities = 109/261 (41%), Positives = 155/261 (59%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I++ T GRL D++ I ++++ ++VLDEADRMLDMGF I+ VM PD
Sbjct: 404 ERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVML-DIRPD- 461
Query: 459 ANRQTLMFSATFP-------ETIQKNYIFIAVGIIGGASTDVVQTILEV---PXXXXXXX 508
RQT+M SAT+P ++ KN I + VG + A+T V+ I+++
Sbjct: 462 --RQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTI 519
Query: 509 XXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
D +I+F AD ++ L T IHG+R Q REQAI D K+
Sbjct: 520 TSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGV 579
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG 628
+++LVAT VASRGLDI+ I HVINYD P I+EYVHR+GRTGR G +G + SF+ + D
Sbjct: 580 VRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTRE-DW 638
Query: 629 AIAKDLVRILEQAGQPVPEFL 649
A+AK+L+ IL++A Q VP+ L
Sbjct: 639 AMAKELIEILQEAEQEVPDEL 659
Score = 360 (131.8 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 81/207 (39%), Positives = 123/207 (59%)
Query: 194 PRPIESFESAGLR-EILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAF 252
P P+ +FE +++ + K ++KP+PIQ A P L+G D++G AQTG+GKT AF
Sbjct: 278 PNPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAF 337
Query: 253 LIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGA 312
L+P M H G V++ APTREL +QI KY++ + +C++ GG
Sbjct: 338 LLPGMIHTEYQ--STPRGTRGGANVLVLAPTRELALQIEMEVKKYSFRGMKAVCVYGGGN 395
Query: 313 SSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHV 372
+M + LE+G I++ T GRL D++ I ++++ ++VLDEADRMLDMGF I+ V
Sbjct: 396 RNMQIS-DLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKV 454
Query: 373 MQHSTMPDVANRQTLMFSATFPETIQK 399
M PD RQT+M SAT+P +++
Sbjct: 455 ML-DIRPD---RQTIMTSATWPPGVRR 477
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 455 (165.2 bits), Expect = 1.4e-42, P = 1.4e-42
Identities = 107/258 (41%), Positives = 154/258 (59%)
Query: 401 GCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVAN 460
G +I++AT GRL D+ I+L S+ ++VLDEADRMLDMGF I ++ PD
Sbjct: 401 GVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIIL-DIRPD--- 456
Query: 461 RQTLMFSATFPETIQ---KNYI----FIAVGIIGGASTDVVQ-TILEVPXXXXXXXXXXX 512
RQT+M SAT+P ++ K+Y+ + VG + A+ + VQ T+L V
Sbjct: 457 RQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDF 516
Query: 513 XXXXDE-DGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ D V++FV AD ++ LC IA S+HG R Q RE+A+ DFK ++++
Sbjct: 517 IHRMEPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKDGRVRI 576
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT +ASRGLD+ I HV NYD P+ ++EYVHR+GRTGR G G + + + D +A
Sbjct: 577 LVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTRE-DWRVA 635
Query: 632 KDLVRILEQAGQPVPEFL 649
+L+ ILE++GQ VPE L
Sbjct: 636 AELITILERSGQDVPEEL 653
Score = 352 (129.0 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 94/251 (37%), Positives = 138/251 (54%)
Query: 194 PRPIESFESAGLREI-LVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAF 252
P P+ +FE A +++N+ + + KPTPIQ A P L G DL+G AQTG+GKT A+
Sbjct: 273 PNPVCTFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAY 332
Query: 253 LIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVAC-KYAYSSVLKICLHYGG 311
L+P H+ P + P +++ PTREL +QI E C KY+Y IC++ GG
Sbjct: 333 LLPGFIHMDGQP--MPRDKRNGPGMLVLTPTRELALQI-EAECNKYSYKGFKSICIYGGG 389
Query: 312 ASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQH 371
+ + + G +I++AT GRL D+ I+L S+ ++VLDEADRMLDMGF I
Sbjct: 390 DRNAQI-KVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMK 448
Query: 372 VMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLA--SVRFV 429
++ PD RQT+M SAT+P +++ + L M LD ++ +V FV
Sbjct: 449 IIL-DIRPD---RQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFV 504
Query: 430 VLDEA-DRMLD 439
DE D + D
Sbjct: 505 QEDEKKDYVFD 515
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 104/257 (40%), Positives = 153/257 (59%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G I +AT GRL D+LD + +L V ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 244 RGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD-- 300
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQT+MFSAT+P+ +Q+ +YI + VG + A++ ++ I+EV
Sbjct: 301 -RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGK 359
Query: 513 XXXX---DEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
D D V++F T R AD I +L + +IHG + Q +R+ +++F+T K
Sbjct: 360 DIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGK 419
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG 628
++VAT VASRG+D+KGI HV NYD P ++YVHRIGRTGR G KG A +++ D +
Sbjct: 420 SPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSD-NA 478
Query: 629 AIAKDLVRILEQAGQPV 645
A++LV IL +A Q +
Sbjct: 479 KQARELVSILSEAKQDI 495
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 105/271 (38%), Positives = 155/271 (57%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +FE AG ++K +K+ + PTPIQ+ A P + GRD++G + T
Sbjct: 109 EIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISAT 168
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++ +P + H+ P L G P V++ APTREL +QI + K+ SS ++
Sbjct: 169 GSGKTLSYCLPAIVHINAQP-LLSPG--DGPIVLVLAPTRELAVQIQQECTKFGKSSRIR 225
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGG R L +G I +AT GRL D+LD + +L V ++VLDEADRMLDMG
Sbjct: 226 NTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMG 285
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL----VATMGRLKDILDRGR 420
F I+ ++ PD RQT+MFSAT+P+ +Q+ + L T+G L D+
Sbjct: 286 FEPQIRKIVDQ-IRPD---RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSL-DLAASHN 340
Query: 421 ISLASVRFVVLDEADRMLDMGFLGDIQHVMQ 451
I V V+D AD+ +G DI+ V++
Sbjct: 341 IKQI-VE--VVDNADKRARLG--KDIEEVLK 366
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 108/259 (41%), Positives = 155/259 (59%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +I+VAT GRL DIL+ RISL + ++VLDEADRMLDMGF I+ +++ +P
Sbjct: 278 ERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKE--IP-- 333
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGG--ASTDVVQTILEVPXXXXXXXX 509
RQTLM++AT+P+ ++K N + +G + A+ + Q I EV
Sbjct: 334 TKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHI-EVVAPMEKQRR 392
Query: 510 XXXXXXXDEDG--VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+F ST R D + L + +IHG + Q +R+ ++ F++
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR-QFGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
+ VLVAT VA+RGLD+K IR V+NYD P +++YVHRIGRTGR G G+A +F+ DQD
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFG-DQD 510
Query: 628 GAIAKDLVRILEQAGQPVP 646
A DL++ILE A Q VP
Sbjct: 511 SKHASDLIKILEGANQRVP 529
Score = 426 (155.0 bits), Expect = 6.5e-40, P = 6.5e-40
Identities = 94/222 (42%), Positives = 137/222 (61%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ VSG P P+ SFE+ G L++ + + ++ PTPIQ + P ++GRD++ A+T
Sbjct: 145 EITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKT 204
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT +LIP HL + G P +++ +PTREL QI E A K+ SS +
Sbjct: 205 GSGKTLGYLIPGFLHLQRIRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRIS 260
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G +I+VAT GRL DIL+ RISL + ++VLDEADRMLDMG
Sbjct: 261 CTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMG 320
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
F I+ +++ +P RQTLM++AT+P+ ++K ++LV
Sbjct: 321 FEPQIRKIVKE--IP--TKRQTLMYTATWPKGVRKIAADLLV 358
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 89/215 (41%), Positives = 137/215 (63%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G + P+P++SF G + +++ +KK+ +T+PTPIQ P ++GRDL+G A+T
Sbjct: 86 EITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAET 145
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P + + P V++ APTREL +QI + A K+ SS +K
Sbjct: 146 GSGKTLSYLLPAIVHVNAQP---MLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIK 202
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGG R L+KG I++AT GRL D+++ +L V ++VLDEADRMLDMG
Sbjct: 203 TTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMG 262
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ H PD RQTL +SAT+P+ +++
Sbjct: 263 FDPQIRKIVSH-IRPD---RQTLYWSATWPKEVEQ 293
Score = 424 (154.3 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 100/259 (38%), Positives = 152/259 (58%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+KG I++AT GRL D+++ +L V ++VLDEADRMLDMGF I+ ++ H PD
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSH-IRPD- 277
Query: 459 ANRQTLMFSATFP---ETIQKNYIFIAVGIIGGAS----TDVVQTILEVPXXXXXXXXXX 511
RQTL +SAT+P E + K +++ +I G+S ++ I++V
Sbjct: 278 --RQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLV 335
Query: 512 XXXXXDEDG--VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
DG ++VF+ T + D I L SIHG + Q++R+ + +F++ K
Sbjct: 336 KLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKS 395
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
++ AT VA+RGLD+K +++VINYD P +++YVHRIGRTGR G KG A +F+ +
Sbjct: 396 PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTV-ANAR 454
Query: 630 IAKDLVRILEQAGQPV-PE 647
AK+L IL++AGQ V PE
Sbjct: 455 FAKELTNILQEAGQKVSPE 473
Score = 40 (19.1 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 176 INFSGWENVEVKVSGDNPPRPIES 199
+ F + EVK +G P PI+S
Sbjct: 104 VGFPDYVLEEVKKAGFTEPTPIQS 127
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 104/262 (39%), Positives = 155/262 (59%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G I +AT GRL D+L+ G+ +L V ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 249 RGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD-- 305
Query: 460 NRQTLMFSATFPETIQ---KNY----IFIAVGIIGGAS----TDVVQTILEVPXXXXXXX 508
RQTLM+SAT+P+ +Q ++Y I + +G + A+ T +V+ I E
Sbjct: 306 -RQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVK 364
Query: 509 XXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
++ ++VF ST R D I YL +IHG + Q++R+ + +F+ K
Sbjct: 365 HLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGK 424
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG 628
++VAT VA+RG+D+KGI HVINYD+P I++YVHRIGRTGR G G A SF+ + +
Sbjct: 425 TSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFT-EGNS 483
Query: 629 AIAKDLVRILEQAGQPVPEFLK 650
+ DL +I+ +A Q VP L+
Sbjct: 484 KLGGDLCKIMREANQTVPPELQ 505
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 93/218 (42%), Positives = 133/218 (61%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
EN E+ V G + P PI +F+ AG + +++ +K + KPTPIQ P L GRD++G
Sbjct: 112 EN-EMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGI 170
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS 301
A TGSGKT ++ +P + H+ P +L G P V++ APTREL +QI K+ SS
Sbjct: 171 AATGSGKTLSYCLPSIVHINAQP-QLQYG--DGPIVLVLAPTRELAVQIQTECSKFGKSS 227
Query: 302 VLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRML 361
++ YGGA R L +G I +AT GRL D+L+ G+ +L V ++VLDEADRML
Sbjct: 228 RIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRML 287
Query: 362 DMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
DMGF I+ ++ PD RQTLM+SAT+P+ +Q+
Sbjct: 288 DMGFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVQQ 321
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 324 (119.1 bits), Expect = 6.1e-42, Sum P(2) = 6.1e-42
Identities = 76/199 (38%), Positives = 117/199 (58%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
+F+S GL + L++ + K + PTPIQ+ IP LEGRD++G A+TGSGKTAAF+IP++
Sbjct: 70 NFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIE 129
Query: 259 HLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFN 318
HL + T +I +P REL +Q +V ++ + L+ GG S
Sbjct: 130 HLKSTLANSNT------RALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQF 183
Query: 319 RQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 378
L +I+VAT GR + ++ L+S+ +VV DEADR+ +MGF + ++ H+ +
Sbjct: 184 SLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEIL-HA-L 241
Query: 379 PDVANRQTLMFSATFPETI 397
P +RQTL+FSAT P T+
Sbjct: 242 P--TSRQTLLFSATLPRTL 258
Score = 196 (74.1 bits), Expect = 6.1e-42, Sum P(2) = 6.1e-42
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 519 DGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVA 578
D +VFV T + ++++ L + + + I+GS Q R I++F+ K +LV T VA
Sbjct: 347 DSTLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVA 406
Query: 579 SRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRIL 638
SRG+DI + +VINYD P + +VHR+GRT R G G A S + G + DL L
Sbjct: 407 SRGIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLL-DLQLFL 465
Query: 639 EQ 640
+
Sbjct: 466 NR 467
Score = 142 (55.0 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 403 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 462
+I+VAT GR + ++ L+S+ +VV DEADR+ +MGF + ++ H+ +P +RQ
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEIL-HA-LP--TSRQ 246
Query: 463 TLMFSATFPETI 474
TL+FSAT P T+
Sbjct: 247 TLLFSATLPRTL 258
Score = 37 (18.1 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 194 PRPIESFESAGLRE-ILVK 211
PR + F AGL++ +LV+
Sbjct: 255 PRTLVDFAKAGLQDPVLVR 273
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 423 (154.0 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 94/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P + GRD++G A+
Sbjct: 234 LNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAK 293
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 294 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHSECKRFGKAYNL 350
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 351 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 410
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 411 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 449
Score = 397 (144.8 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 104/260 (40%), Positives = 144/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 369 QEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 426
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXX--X 509
RQTL+FSATF + I+K + I + G IG A+ DV Q + P
Sbjct: 427 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLT 484
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + + +HG QS+R + I +FK K +
Sbjct: 485 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGI 544
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+LVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 545 PILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 603
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 604 FAGDLVRNLEGANQHVSKEL 623
Score = 47 (21.6 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 398 QKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD 439
+KKG ILVAT D+ RG + + S++ V+ + R +D
Sbjct: 540 KKKGIPILVAT-----DVAARG-LDIPSIKTVINYDVARDID 575
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 105/262 (40%), Positives = 154/262 (58%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
E I KKG ++++AT GRL D+L++ +I+ +++ LDEADR++D+GF DI+ V+ + T
Sbjct: 349 EHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLGFEDDIRSVLDNFT 408
Query: 455 MPDVANRQTLMFSATFPETIQKNY-------IFIAVGIIGGASTDVVQTILEVPXXXXXX 507
RQTL+FSAT P+ IQ+ + + VG G A+ +V Q + E
Sbjct: 409 N----QRQTLLFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQEV-EFVKPEAKI 463
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
V++F ++ D I YL ++ SIHG + Q +RE AI F+
Sbjct: 464 VYLLECLQKTPPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESAIKAFREG 523
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K VLVAT VAS+GLD I+HVIN+D+P+EI+ Y+HRIGRTGR GNKG AT+F + +
Sbjct: 524 KKDVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFINKNNT 583
Query: 628 GAIAKDLVRILEQAGQPVPEFL 649
++ DL +L +A Q VP L
Sbjct: 584 ESLLLDLKYLLIEAKQKVPPAL 605
Score = 315 (115.9 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 76/232 (32%), Positives = 127/232 (54%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
+ + + G++ P PI +F+ + + ++ L + KP+PIQ +P L GRD++G
Sbjct: 206 DQLNIITDGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGI 265
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS- 300
A TGSGKT F +P++ LE +L P +I P+REL Q +++ + +
Sbjct: 266 AYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVNSFTNAL 325
Query: 301 ------SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVL 354
L+ L GG +KG ++++AT GRL D+L++ +I+ +++ L
Sbjct: 326 HKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGL 385
Query: 355 DEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
DEADR++D+GF DI+ V+ + T RQTL+FSAT P+ IQ+ + LV
Sbjct: 386 DEADRLIDLGFEDDIRSVLDNFTN----QRQTLLFSATMPKKIQEFARSALV 433
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 105/263 (39%), Positives = 155/263 (58%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G I++AT GRL D+L+ G+ +L V ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 235 RGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD-- 291
Query: 460 NRQTLMFSATFPETIQK---NY----IFIAVGIIG-GAS---TDVVQTILEVPXXXXXXX 508
RQTLM+SAT+P+ +++ +Y I + VG + AS T +V+ + +
Sbjct: 292 -RQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNK 350
Query: 509 XXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
+E ++F ST R D I YL E +IHG + Q +R+ + +F+ +
Sbjct: 351 YLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGR 410
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG 628
++VAT VA+RG+D+KGI +VINYD+P I++YVHRIGRTGR G G A SF+ G
Sbjct: 411 SPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKG 470
Query: 629 AIAKDLVRILEQAGQPVP-EFLK 650
AK L+ I+ +A Q +P E LK
Sbjct: 471 LGAK-LISIMREANQNIPPELLK 492
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 91/224 (40%), Positives = 135/224 (60%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
EN E+ +SG + P+PI +F+ AG + ++ +K + KPT IQ P L GRD++G
Sbjct: 98 EN-EMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGI 156
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS 301
A TGSGKT ++ +P + H+ P L G P V++ APTREL +QI K+ +SS
Sbjct: 157 AATGSGKTLSYCLPGIVHINAQP-LLAPG--DGPIVLVLAPTRELAVQIQTECSKFGHSS 213
Query: 302 VLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRML 361
++ YGG R L +G I++AT GRL D+L+ G+ +L V ++VLDEADRML
Sbjct: 214 RIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRML 273
Query: 362 DMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
DMGF I+ ++ PD RQTLM+SAT+P+ +++ + L
Sbjct: 274 DMGFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVKQLAADYL 313
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 102/263 (38%), Positives = 150/263 (57%)
Query: 401 GCNILVATMGRLKDILDRGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
GC+IL AT GRL +D+ + +L VR+VV+DEAD ML + D++ +M S
Sbjct: 262 GCDILCATPGRLLHFMDKPELLNLQRVRYVVIDEADEMLTADWEEDMKKIM--SAGGAAQ 319
Query: 460 NRQTLMFSATFPETIQ--------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+ L+FSATFP+ I+ ++++ + VG G ++++QT++E
Sbjct: 320 EIKYLLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAPMNKKRALND 379
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLC-ETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
I+FV+ AD + YL E ++ TS+H R Q +RE A+ F+
Sbjct: 380 LINSMPPQRTIIFVNNKWTADELDDYLYNECKLPCTSMHADRTQREREDALRAFRAGTAP 439
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQE----IDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
+LV T V +RG+D++ + HV+NYDLP I+EY HRIGRTGR+GNKG ATSFY D+
Sbjct: 440 ILVTTGVTARGIDVRNVAHVVNYDLPSMDHGGIEEYTHRIGRTGRIGNKGLATSFYT-DR 498
Query: 627 DGAIAKDLVRILEQAGQPVPEFL 649
D AIA LVR + + Q +PEFL
Sbjct: 499 DEAIASVLVRTMLETNQEIPEFL 521
Score = 370 (135.3 bits), Expect = 7.9e-32, P = 7.9e-32
Identities = 97/239 (40%), Positives = 134/239 (56%)
Query: 175 GINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLE 234
GI+F + V G P FE AGL ++KN+ Y PTPIQ Y IPA +
Sbjct: 99 GIDFKVIREIAVVQEGPVRVEPALRFEDAGLHPAMLKNVDLCGYKVPTPIQAYCIPAIHK 158
Query: 235 GRDLMGCAQTGSGKTAAFLIPIMHHLL----------ESPGEL---VTGYC-AQPEVIIC 280
G D++G AQTGSGKTAAFLIP+++ L+ +P E + G A+P V+I
Sbjct: 159 GHDVIGIAQTGSGKTAAFLIPVINKLMGKAKKLAAPRPNPVEYNMDIHGPVRAEPLVVIV 218
Query: 281 APTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILD 340
PTREL +Q A K Y S+L+ + YGG + M RQ+ GC+IL AT GRL +D
Sbjct: 219 CPTRELAIQAFNEARKLCYRSMLRPGVVYGGGNFMDQIRQIGLGCDILCATPGRLLHFMD 278
Query: 341 RGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
+ + +L VR+VV+DEAD ML + D++ +M S + L+FSATFP+ I+
Sbjct: 279 KPELLNLQRVRYVVIDEADEMLTADWEEDMKKIM--SAGGAAQEIKYLLFSATFPKKIR 335
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 103/257 (40%), Positives = 150/257 (58%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G + +AT GRL D+L+ GR +L V ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 262 RGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ-IRPD-- 318
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGAS----TDVVQTILEVPXXXXXXX 508
RQT M+SAT+P+ +++ NYI + +G + ++ T +V+ I E
Sbjct: 319 -RQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIK 377
Query: 509 XXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
+ +VF T R AD I +L + SIHG + Q +R+ +++FKT K
Sbjct: 378 HLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGK 437
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG 628
++VAT VASRG+D++ I HVINYD P ++YVHRIGRTGR G KG A +F+ D +
Sbjct: 438 SPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTD-NA 496
Query: 629 AIAKDLVRILEQAGQPV 645
A+DLV IL +A Q +
Sbjct: 497 KQARDLVTILSEAKQQI 513
Score = 403 (146.9 bits), Expect = 2.8e-37, P = 2.8e-37
Identities = 97/258 (37%), Positives = 145/258 (56%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G + PRP+E+F+ AG + ++ +K + KPT IQ P L GRD++G A+T
Sbjct: 127 EMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAET 186
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++ +P + H+ P L G P V+I APTREL +QI K+ SS ++
Sbjct: 187 GSGKTLSYCLPAIVHINAQP-LLAPG--DGPIVLILAPTRELAVQIQAEISKFGKSSRIR 243
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGG R L +G + +AT GRL D+L+ GR +L V ++VLDEADRMLDMG
Sbjct: 244 NTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMG 303
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGC----NILVATMGRLKDILDRGR 420
F I+ ++ PD RQT M+SAT+P+ +++ N + +G + D+ R
Sbjct: 304 FEPQIRKIISQ-IRPD---RQTCMWSATWPKEVRQLASDFLNNYIQVNIGSM-DLSANHR 358
Query: 421 ISLASVRFVVLDEADRML 438
I+ ++ DRM+
Sbjct: 359 ITQIVEVISEFEKRDRMI 376
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 279 (103.3 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 76/231 (32%), Positives = 124/231 (53%)
Query: 172 IQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPA 231
++ +N S + + + G N + +ESF+ L+E L++ + + KP+ IQK AI
Sbjct: 4 VKNDVNVSSVVDADGLIEG-NYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVP 62
Query: 232 GLEGRDLMGCAQTGSGKTAAFLIPIMHHL-LESPGELVTGYCAQPEVIICAPTRELVMQI 290
G+D++ AQ+G+GKTA F + I+ + E P + ++ APTREL QI
Sbjct: 63 CTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDP---------HVQALVMAPTRELAQQI 113
Query: 291 HEVAC---KYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLA 347
+V +Y ++L C+ GG S R+LE G +++V T GR+ D+++R + +
Sbjct: 114 QKVMSALGEYLNVNILP-CI--GGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTS 170
Query: 348 SVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP-DVANRQTLMFSATFPETI 397
++ VLDEAD ML GF I V + +MP DV Q ++ SAT P +
Sbjct: 171 RIKMFVLDEADEMLSRGFKDQIYEVFR--SMPQDV---QVVLLSATMPSEV 216
Score = 212 (79.7 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 40/126 (31%), Positives = 72/126 (57%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F +T R D + + E + + +HG Q++R+ + +F++ +VL+ T + +RG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR+GR G KG A +F + D K++
Sbjct: 332 IDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVT-ENDARQLKEIESYYTTQ 390
Query: 642 GQPVPE 647
+ +PE
Sbjct: 391 IEEMPE 396
Score = 122 (48.0 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 38/111 (34%), Positives = 57/111 (51%)
Query: 369 IQHVMQHSTMPDVANRQTL-MFSATFPETIQKK---GCNILVATMGRLKDILDRGRISLA 424
IQ VM S + + N L T Q+K G +++V T GR+ D+++R + +
Sbjct: 113 IQKVM--SALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTS 170
Query: 425 SVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP-DVANRQTLMFSATFPETI 474
++ VLDEAD ML GF I V + +MP DV Q ++ SAT P +
Sbjct: 171 RIKMFVLDEADEMLSRGFKDQIYEVFR--SMPQDV---QVVLLSATMPSEV 216
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 106/255 (41%), Positives = 144/255 (56%)
Query: 404 ILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQT 463
+ +AT GRL D+L++ +SL R++ LDEADRM+DMGF DI+ + + RQT
Sbjct: 167 VKLATPGRLMDLLNKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFK----GQRQT 222
Query: 464 LMFSATFPETIQKNY--------IFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXXXX 515
L+FSAT P+ IQ N+ I I VG G AS DV+Q + E
Sbjct: 223 LLFSATMPKKIQ-NFAKSALVKPITINVGRAGAASLDVIQEV-EYVKEEAKMVYLLECLQ 280
Query: 516 XDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVAT 575
V++F + D I YL + +IHG + Q +R +AI FK K VLVAT
Sbjct: 281 KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVAT 340
Query: 576 AVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLV 635
VAS+GLD I+HV+NYD+P+EI+ YVHRIGRTGR G G AT+F + D ++ DL
Sbjct: 341 DVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDLK 400
Query: 636 RILEQAGQPVPEFLK 650
+L +A Q VP L+
Sbjct: 401 ALLVEAKQKVPPVLQ 415
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 86/230 (37%), Positives = 119/230 (51%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V G+ P PI+SF + ++K LKK PTPIQ IP L GRD++G A TG
Sbjct: 25 ILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTG 84
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQ--PEVIICAPTRELVMQIH----EVACKYAY 299
SGKT F +PI+ LE L +C + P +I P+ + H E CK
Sbjct: 85 SGKTLVFTLPIIMFCLEQEKRLP--FCKREGPYGLIICPSVNVAKHTHHGIIEYYCKLLE 142
Query: 300 SS---VLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDE 356
++ L GG M Q+E + +AT GRL D+L++ +SL R++ LDE
Sbjct: 143 DEGAPQMRCALCIGG---MSVKEQMEV---VKLATPGRLMDLLNKKMVSLDICRYLALDE 196
Query: 357 ADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
ADRM+DMGF DI+ + + RQTL+FSAT P+ IQ + LV
Sbjct: 197 ADRMIDMGFEEDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALV 242
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 423 (154.0 bits), Expect = 7.9e-41, Sum P(2) = 7.9e-41
Identities = 94/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P + GRD++G A+
Sbjct: 239 LNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAK 298
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHSECKRFGKAYNL 355
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 415
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 416 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 454
Score = 397 (144.8 bits), Expect = 9.2e-35, P = 9.2e-35
Identities = 104/260 (40%), Positives = 144/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 374 QEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 431
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXX--X 509
RQTL+FSATF + I+K + I + G IG A+ DV Q + P
Sbjct: 432 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLT 489
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + + +HG QS+R + I +FK K +
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGI 549
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+LVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 550 PILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 608
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 609 FAGDLVRNLEGANQHVSKEL 628
Score = 47 (21.6 bits), Expect = 7.9e-41, Sum P(2) = 7.9e-41
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 398 QKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD 439
+KKG ILVAT D+ RG + + S++ V+ + R +D
Sbjct: 545 KKKGIPILVAT-----DVAARG-LDIPSIKTVINYDVARDID 580
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 423 (154.0 bits), Expect = 8.0e-41, Sum P(2) = 8.0e-41
Identities = 94/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P + GRD++G A+
Sbjct: 241 LNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAK 300
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 301 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHSECKRFGKAYNL 357
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 358 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 417
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 418 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 456
Score = 397 (144.8 bits), Expect = 9.2e-35, P = 9.2e-35
Identities = 104/260 (40%), Positives = 144/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 376 QEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 433
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXX--X 509
RQTL+FSATF + I+K + I + G IG A+ DV Q + P
Sbjct: 434 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLT 491
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + + +HG QS+R + I +FK K +
Sbjct: 492 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGI 551
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+LVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 552 PILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 610
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 611 FAGDLVRNLEGANQHVSKEL 630
Score = 47 (21.6 bits), Expect = 8.0e-41, Sum P(2) = 8.0e-41
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 398 QKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLD 439
+KKG ILVAT D+ RG + + S++ V+ + R +D
Sbjct: 547 KKKGIPILVAT-----DVAARG-LDIPSIKTVINYDVARDID 582
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 107/258 (41%), Positives = 149/258 (57%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +I++AT GRL D+ I+L S+ ++VLDEADRMLDMGF I ++ PD
Sbjct: 175 KGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILI-DVRPD-- 231
Query: 460 NRQTLMFSATFPETIQ---KNYI----FIAVGIIGGASTDVVQTILEVPXXXXX-XXXXX 511
RQT+M SAT+P+ ++ K+Y+ + VG + A + VV L+
Sbjct: 232 -RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAVSGVVLKYLQFDKDIFTWKYMQV 290
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
D V+VFV AD IA L + S+HG R Q REQA+ DFK K+++
Sbjct: 291 NAQSFCTDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRI 350
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT +ASRGLD+ I HV N+D P+ I+EYVHR+GRTGR G G+A + +D A
Sbjct: 351 LVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITK-KDWKAA 409
Query: 632 KDLVRILEQAGQPVPEFL 649
+L+ IL++A Q VP+ L
Sbjct: 410 SELIDILQRAKQVVPDEL 427
Score = 374 (136.7 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 194 PRPIESFESAGLR-EILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAF 252
P P+ FE + ++ N++K+ + KPTPIQ A P L+G DL+G AQTG+GKT A+
Sbjct: 48 PNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAY 107
Query: 253 LIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGA 312
L+P HL P + P +++ APTREL +Q+ KY Y IC++ GG
Sbjct: 108 LMPGFIHLASQP--IPKDKRGGPGMLVLAPTRELALQVEAECLKYTYKGFKSICIYGGGD 165
Query: 313 SSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHV 372
N + KG +I++AT GRL D+ I+L S+ ++VLDEADRMLDMGF I +
Sbjct: 166 RKAQIN-VVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKI 224
Query: 373 MQHSTMPDVANRQTLMFSATFPETIQK 399
+ PD RQT+M SAT+P+ +++
Sbjct: 225 LI-DVRPD---RQTVMMSATWPDGVRR 247
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 433 (157.5 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 103/260 (39%), Positives = 152/260 (58%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
KKG +I++AT GRL D+ ++L ++ ++VLDEAD+MLDMGF I ++ PD
Sbjct: 363 KKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILL-DVRPD- 420
Query: 459 ANRQTLMFSATFPETIQK---NYI----FIAVGIIG-GASTDVVQTILEVPXXXX-XXXX 509
RQT+M SAT+P ++ + +Y+ + VG + A + V Q I+
Sbjct: 421 --RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQ 478
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
D VIVFVS AD ++ L I+ S+HG R Q RE+A+ +FKT K+
Sbjct: 479 TFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKV 538
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
++L+AT +ASRGLD+ + HV N+D P+ I+EYVHRIGRTGR G G + + + D
Sbjct: 539 RILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRN-DWR 597
Query: 630 IAKDLVRILEQAGQPVPEFL 649
+A +L+ ILE+A Q +PE L
Sbjct: 598 VASELINILERANQSIPEEL 617
Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 96/268 (35%), Positives = 151/268 (56%)
Query: 177 NFS-GWENVEVKVSGDNP-PRPIESFESAG--LREILVKNLKKSNYTKPTPIQKYAIPAG 232
NF+ W+ ++K P P P +F+ A E++ +N+KK+ + KPTPIQ A P
Sbjct: 220 NFNITWD--DLKDGEKRPIPNPTCTFDDAFQCYPEVM-ENIKKAGFQKPTPIQSQAWPIV 276
Query: 233 LEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHE 292
L+G DL+G AQTG+GKT +L+P HL+ P + G +P +++ PTREL +Q+
Sbjct: 277 LQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPS--LKGQRNRPGMLVLTPTRELALQVEG 334
Query: 293 VACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFV 352
CKY+Y + +C+ YGG + +L+KG +I++AT GRL D+ ++L ++ ++
Sbjct: 335 ECCKYSYKGLRSVCV-YGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYL 393
Query: 353 VLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRL 412
VLDEAD+MLDMGF I ++ PD RQT+M SAT+P ++ + + L M
Sbjct: 394 VLDEADKMLDMGFEPQIMKILL-DVRPD---RQTVMTSATWPHSVHRLAQSYLKEPMIVY 449
Query: 413 KDILDRGRISLASVRFVVLDEADRMLDM 440
LD +S +V E ++ M
Sbjct: 450 VGTLDLVAVSSVKQNIIVTTEEEKWSHM 477
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 346 (126.9 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 90/265 (33%), Positives = 151/265 (56%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNP-------PRPIESFESAGLR- 206
Y P++++ + N + +T + S E E+++S DN P+P+ + GL
Sbjct: 206 YSPEELEPFQKNFYIES-ETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLST 264
Query: 207 EILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHL-LESPG 265
+ +V +K ++ TPIQ A+PA + GRD++G ++TGSGKT ++L+P++ + + P
Sbjct: 265 DTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRP- 323
Query: 266 ELVTGYCAQPEVIICAPTRELVMQIHEVACKY--AYSSVLKICLHYGGASSMHFNRQLEK 323
++ + P +I APTREL +QIHE K+ A +S+ +C GG+ L++
Sbjct: 324 --LSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCT-GGSEMKKQITDLKR 380
Query: 324 GCNILVATMGRLKDIL--DRGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPD 380
G I+VAT GR DIL + G++ S + FVV+DEADR+ D+GF I +M+ + PD
Sbjct: 381 GTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMK-TVRPD 439
Query: 381 VANRQTLMFSATFPETIQKKGCNIL 405
+Q ++FSATFP ++ +L
Sbjct: 440 ---KQCVLFSATFPNKLRSFAVRVL 461
Score = 155 (59.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
I+FVS+ DFI+ L I T +IH + +R + FK +K +L+ T V SRG
Sbjct: 529 IIFVSSQNICDFISKKLLNAGIVTCAIHAGKPYQERLMNLEKFKREKNSILLCTEVLSRG 588
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ-DGA 629
L++ + VI Y+ + +YVH GRT R G A + D+ GA
Sbjct: 589 LNVPEVSLVIIYNAVKTFAQYVHTTGRTARGSRSGTAITLLLHDELSGA 637
Score = 147 (56.8 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+VAT GR DIL + G++ S + FVV+DEADR+ D+GF I +M+ +
Sbjct: 379 KRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMK-TVR 437
Query: 456 PDVANRQTLMFSATFPETIQ 475
PD +Q ++FSATFP ++
Sbjct: 438 PD---KQCVLFSATFPNKLR 454
Score = 49 (22.3 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 173 QTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
+ G++F E+++ DN P++ F ++ L+E + N K
Sbjct: 114 EIGVSFRSKEHIQKAPEHDNEKDPLDEFMTS-LKEEKMSNSK 154
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 323 (118.8 bits), Expect = 3.4e-40, Sum P(2) = 3.4e-40
Identities = 85/242 (35%), Positives = 136/242 (56%)
Query: 160 VDQSEDNLFSSG-IQTGINFSGWENVEVKVSGDNPPRPIE---SFESAGLREILVKNLKK 215
++ S+D +SG QTG ++V S +N + SF S GL +I++ N+K+
Sbjct: 98 LEMSDDENNASGKTQTG---DDEDDVNEYFSTNNLEKTKHKKGSFPSFGLSKIVLNNIKR 154
Query: 216 SNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQP 275
+ +PTPIQ+ IP L+ RD++G A+TGSGKTAAF++P++ L G++ G A
Sbjct: 155 KGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKI--GARA-- 210
Query: 276 EVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRL 335
+I +P+REL MQ V +A + L+ L GG S + ++++AT GR
Sbjct: 211 --VILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRF 268
Query: 336 KDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
+ + L SV +VV DEADR+ +MGF + ++ +++P RQTL+FSAT P
Sbjct: 269 LHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELL--ASLP--TTRQTLLFSATLPN 324
Query: 396 TI 397
++
Sbjct: 325 SL 326
Score = 183 (69.5 bits), Expect = 3.4e-40, Sum P(2) = 3.4e-40
Identities = 40/103 (38%), Positives = 62/103 (60%)
Query: 518 EDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAV 577
E I+FV T + ++I+ L + + I+G+ Q R++ +++F+ +LV T V
Sbjct: 432 EKATILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDV 491
Query: 578 ASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATS 620
A+RG+DI + +VINY LP +VHR+GRT R GNKG A S
Sbjct: 492 AARGVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYS 534
Score = 132 (51.5 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 403 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 462
++++AT GR + + L SV +VV DEADR+ +MGF + ++ +++P RQ
Sbjct: 259 DVIIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELL--ASLP--TTRQ 314
Query: 463 TLMFSATFPETIQKNYIFIAVGII 486
TL+FSAT P ++ F+ G++
Sbjct: 315 TLLFSATLPNSLVD---FVKAGLV 335
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 428 (155.7 bits), Expect = 3.7e-40, P = 3.7e-40
Identities = 109/295 (36%), Positives = 159/295 (53%)
Query: 369 IQHVMQHST---MPDVANRQTL-MFSATFPETIQ--KKGCNILVATMGRLKDILDRGRIS 422
IQH +H MP++ R L M E + +G +I+VAT GRL D+LD+ ++
Sbjct: 273 IQHYSKHLQACGMPEI--RSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILT 330
Query: 423 LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKNY---- 478
L R++ +DEADRM+DMGF D++ + RQTL+FSAT P+ IQ N+
Sbjct: 331 LDMCRYLCMDEADRMIDMGFEEDVRTIFSFFK----GQRQTLLFSATMPKKIQ-NFARSA 385
Query: 479 ----IFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFI 534
+ I VG G AS +V Q + E V++F ++ D I
Sbjct: 386 LVKPVTINVGRAGAASMNVTQQV-EYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCI 444
Query: 535 ACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYD 594
YL + +IHG + Q +R +A+ ++ K VLVAT VAS+GLD ++HVINYD
Sbjct: 445 HEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYD 504
Query: 595 LPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEFL 649
+P +I+ YVHRIGRTGR KG AT+ + + ++ DL +L + Q VP+FL
Sbjct: 505 MPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFL 559
Score = 341 (125.1 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 83/229 (36%), Positives = 119/229 (51%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ + V G+ P PI SF + ++ L PTPIQ +P L GRDL+G A
Sbjct: 163 LRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAF 222
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS--- 300
TGSGKT F++P++ LE L P +I P+REL Q HE+ Y+
Sbjct: 223 TGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQA 282
Query: 301 ---SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEA 357
++ CL GG + +G +I+VAT GRL D+LD+ ++L R++ +DEA
Sbjct: 283 CGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEA 342
Query: 358 DRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
DRM+DMGF D++ + RQTL+FSAT P+ IQ + LV
Sbjct: 343 DRMIDMGFEEDVRTIFSFFK----GQRQTLLFSATMPKKIQNFARSALV 387
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 430 (156.4 bits), Expect = 4.0e-40, P = 4.0e-40
Identities = 101/259 (38%), Positives = 150/259 (57%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +I++AT GRL D+ + L S+ ++VLDEAD+MLDMGF I ++ PD
Sbjct: 366 KGVDIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIMKILL-DIRPD-- 422
Query: 460 NRQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQT--ILEVPXXXXXXXXX 510
RQT+M SAT+P +++ +Y+ + VG + + V+ I+
Sbjct: 423 -RQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRSHIQT 481
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D VI+FVS AD ++ L I+ S+HG+R Q RE+A+ +FKT K++
Sbjct: 482 FIESMSPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVR 541
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+L+AT +ASRGLD+ + HV NYD P+ I+EYVHR+GRTGR G G + + D I
Sbjct: 542 ILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRS-DWKI 600
Query: 631 AKDLVRILEQAGQPVPEFL 649
A +L+ ILE+A Q +PE L
Sbjct: 601 AGELIHILERANQSIPEDL 619
Score = 363 (132.8 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 89/246 (36%), Positives = 133/246 (54%)
Query: 194 PRPIESFESAG--LREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAA 251
P P FE A E+++ N+KK+ + KPTPIQ A P L+G DL+G AQTG+GKT +
Sbjct: 236 PNPACKFEDAFQCYPEVMI-NIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLS 294
Query: 252 FLIPIMHHLLESPGELVTGYCAQ-PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYG 310
+L+P H+ P P +++ PTREL +Q+ KY+Y + +C+ YG
Sbjct: 295 YLMPGFIHVDSQPVVFSLQRARNGPGMLVLTPTRELALQVEAECSKYSYKGLKSVCV-YG 353
Query: 311 GASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQ 370
G + L KG +I++AT GRL D+ + L S+ ++VLDEAD+MLDMGF I
Sbjct: 354 GGDRDGQIKDLLKGVDIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIM 413
Query: 371 HVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFVV 430
++ PD RQT+M SAT+P +++ + L M LD +S +V
Sbjct: 414 KILL-DIRPD---RQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIV 469
Query: 431 LDEADR 436
E ++
Sbjct: 470 TTEDEK 475
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I++AT GRL D+L+ +L V ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 286 RRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQ-IRPD- 343
Query: 459 ANRQTLMFSATFP---ETIQKNYIFIAV-GIIGG----ASTDVVQTILEVPX-XXXXXXX 509
RQTL++SAT+P ET+ + ++ IIG A+ + Q I VP
Sbjct: 344 --RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLL 401
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
D +++FV T R D + L +IHG + QS+R++ + +FK+ +
Sbjct: 402 TLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRS 461
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
++ AT VA+RGLD+K I+ V+NYD P +++Y+HRIGRTGR G KG A +F+ D +
Sbjct: 462 PIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHD-NAK 520
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A++LV+IL++AGQ VP L
Sbjct: 521 FARELVKILQEAGQVVPPTL 540
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 90/215 (41%), Positives = 132/215 (61%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
++ V G + P+P++ F+ A + +++ + K +T+PTPIQ P L+GRDL+G A+T
Sbjct: 152 DISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAET 211
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAY-SSVL 303
GSGKT A+L+P + H+ P G P V+I APTREL +QI E + K+ S V
Sbjct: 212 GSGKTLAYLLPALVHVSAQPR---LGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVR 268
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
C+ YGGA R L +G I++AT GRL D+L+ +L V ++VLDEADRMLDM
Sbjct: 269 STCI-YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDM 327
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
GF I+ ++ PD RQTL++SAT+P ++
Sbjct: 328 GFEPQIRKIVSQ-IRPD---RQTLLWSATWPREVE 358
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 410 (149.4 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 91/215 (42%), Positives = 130/215 (60%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G + P+PI F A + ++ + K N+T PTPIQ P L G+D++G AQT
Sbjct: 83 EITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQT 142
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y +S +K
Sbjct: 143 GSGKTLSYLLPAIVHINHQPF-LEHG--DGPICLVLAPTRELAQQVQQVAAEYGKASRIK 199
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 200 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG 259
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 260 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 290
Score = 383 (139.9 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 96/265 (36%), Positives = 148/265 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 217 ERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 274
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTILEV----PXXXXX 506
RQTLM+SAT+P+ ++ K YI I VG + A+ +++Q I++V
Sbjct: 275 --RQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQ-IVDVCNDGEKEDKL 331
Query: 507 XXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
E+ I+FV T R D + + IHG + Q +R+ +++FK
Sbjct: 332 IRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKY 391
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K +L+AT VASRGLD++ ++ VIN+D P ++Y+HRIGRT R G A +F+ P+
Sbjct: 392 GKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNN 451
Query: 627 DGAIAKDLVRILEQAGQPV-PEFLK 650
A DLV +L +A Q + P+ ++
Sbjct: 452 MKQ-AHDLVSVLREANQAINPKLIQ 475
Score = 38 (18.4 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 608 RTGRVGNKGRATSFYDPDQDG 628
++G GN+G + P+Q G
Sbjct: 564 QSGGYGNQGYQNQQFPPNQGG 584
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 104/263 (39%), Positives = 150/263 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +I+VAT GRL D LD G ++ ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 250 ERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQ-IRPD- 307
Query: 459 ANRQTLMFSATFPETI-------QKNYIFIAVGIIGGAS----TDVVQTILEVPXXXXXX 507
RQTLMFSAT+P+ + QK+ F+ VG + A+ T VV + E
Sbjct: 308 --RQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLM 365
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E I+FV T R AD + + T IHG + Q +R+ + +FK
Sbjct: 366 ELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAG 425
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +++AT VA+RGLD+ I+ VINYD P ++YVHRIGRTGR KG A +F+ +
Sbjct: 426 KTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFT-HTN 484
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
+ AKDL+++L++A Q VP+ L+
Sbjct: 485 ASKAKDLLKVLDEAKQTVPQALR 507
Score = 382 (139.5 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 89/219 (40%), Positives = 127/219 (57%)
Query: 181 WENV-EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLM 239
W + +V + G PRP+ F A L + L + KPT IQ + P + GRD++
Sbjct: 112 WVSANQVTLEGRGVPRPVFEFNEAPLPG-QIHELLYGKFQKPTVIQSISWPIAMSGRDII 170
Query: 240 GCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAY 299
A+TGSGKT AF++P + H+ + G P V++ PTREL Q+ EV+ + +
Sbjct: 171 SIAKTGSGKTLAFMLPALVHITKQ-AHRQRG--EGPAVLVLLPTRELAQQVQEVSIDFCH 227
Query: 300 SSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
S LK+ +GGAS R LE+G +I+VAT GRL D LD G ++ ++VLDEADR
Sbjct: 228 SLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADR 287
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
MLDMGF I+ ++ PD RQTLMFSAT+P+ ++
Sbjct: 288 MLDMGFEPQIKKIIGQ-IRPD---RQTLMFSATWPKEVR 322
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 98/253 (38%), Positives = 149/253 (58%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K G +IL+AT GRL D+L +SL+++ +V DEADRMLDMGF +I + Q+ +P
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQY--LPKT 181
Query: 459 ANRQTLMFSATFPETI---QKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+QTL+FSATF + I KN + + + A+ DV Q + V
Sbjct: 182 --KQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSF 239
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ V+VF T + AD +A + + + + +IHG + Q RE+A+H+FK K++
Sbjct: 240 LIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRA 299
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
L+AT VA+RG+DIKG+ HVINY+LP ++YVHRIGRT R GN G A S P ++ +
Sbjct: 300 LIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLT 359
Query: 632 --KDL--VRILEQ 640
++L +++L+Q
Sbjct: 360 AIEELLDIQLLQQ 372
Score = 380 (138.8 bits), Expect = 4.2e-35, P = 4.2e-35
Identities = 97/249 (38%), Positives = 146/249 (58%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
+F S L L+K + +S Y +PT IQK +IP L D+M AQTG+GKTAAF +PI+
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 259 HLLE-SPGELVTGYCAQPEV--IICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSM 315
L+ P C +PE+ ++ PTREL Q+H+ C Y + + I + YGG S+
Sbjct: 66 QLISVQP-------C-KPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTK 117
Query: 316 HFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQH 375
+L+ G +IL+AT GRL D+L +SL+++ +V DEADRMLDMGF +I + Q+
Sbjct: 118 KQISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQY 177
Query: 376 STMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEAD 435
+P +QTL+FSATF + I K NILV ++ +I ++ + + + V +AD
Sbjct: 178 --LPKT--KQTLLFSATFADDIYKMSKNILVEP--KMVEIDEKNKAADDVEQLVYGVDAD 231
Query: 436 RMLDM-GFL 443
R ++ FL
Sbjct: 232 RKRELTSFL 240
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 98/253 (38%), Positives = 149/253 (58%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K G +IL+AT GRL D+L +SL+++ +V DEADRMLDMGF +I + Q+ +P
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQY--LPKT 181
Query: 459 ANRQTLMFSATFPETI---QKNYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+QTL+FSATF + I KN + + + A+ DV Q + V
Sbjct: 182 --KQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSF 239
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ V+VF T + AD +A + + + + +IHG + Q RE+A+H+FK K++
Sbjct: 240 LIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRA 299
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
L+AT VA+RG+DIKG+ HVINY+LP ++YVHRIGRT R GN G A S P ++ +
Sbjct: 300 LIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLT 359
Query: 632 --KDL--VRILEQ 640
++L +++L+Q
Sbjct: 360 AIEELLDIQLLQQ 372
Score = 380 (138.8 bits), Expect = 4.2e-35, P = 4.2e-35
Identities = 97/249 (38%), Positives = 146/249 (58%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
+F S L L+K + +S Y +PT IQK +IP L D+M AQTG+GKTAAF +PI+
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 259 HLLE-SPGELVTGYCAQPEV--IICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSM 315
L+ P C +PE+ ++ PTREL Q+H+ C Y + + I + YGG S+
Sbjct: 66 QLISVQP-------C-KPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTK 117
Query: 316 HFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQH 375
+L+ G +IL+AT GRL D+L +SL+++ +V DEADRMLDMGF +I + Q+
Sbjct: 118 KQISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQY 177
Query: 376 STMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEAD 435
+P +QTL+FSATF + I K NILV ++ +I ++ + + + V +AD
Sbjct: 178 --LPKT--KQTLLFSATFADDIYKMSKNILVEP--KMVEIDEKNKAADDVEQLVYGVDAD 231
Query: 436 RMLDM-GFL 443
R ++ FL
Sbjct: 232 RKRELTSFL 240
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 98/260 (37%), Positives = 154/260 (59%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +I++AT GRL D+ ++L S+ ++VLDEAD+MLD+GF I ++ PD
Sbjct: 323 KGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILL-DVRPD-- 379
Query: 460 NRQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQT--ILEVPXXXXXXXXX 510
RQT+M +A++P++ ++ +Y+ + VG + + + V+ I+
Sbjct: 380 -RQTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLVKE 438
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D VIVFVS AD ++ L I S+HG R QS R+QA+ DF+T ++K
Sbjct: 439 FLQSLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVK 498
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+L+AT +A+RGLD+ + HV NY+ P+ I+EYVHR+GRTGR G G + + D D I
Sbjct: 499 ILIATDLAARGLDVSDVTHVYNYNFPRNIEEYVHRVGRTGRAGKIGESITLVTQD-DWKI 557
Query: 631 AKDLVRILEQAGQPVPEFLK 650
A +L++IL++A Q VP L+
Sbjct: 558 ADELIKILQRANQIVPPSLR 577
Score = 348 (127.6 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 85/253 (33%), Positives = 142/253 (56%)
Query: 194 PRPIESFESAGLR--EILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAA 251
P+P +FE A + EI+ ++++++ + KPTPIQ + P L+G DL+G AQTG+GKT +
Sbjct: 196 PKPTCTFEDAFQQYPEIM-QSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLS 254
Query: 252 FLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGG 311
+L+P H+ P + P +++ PTREL +Q+ KY Y + +C+ YGG
Sbjct: 255 YLMPGFIHIHSQP--VSRKQRNGPGMLVLTPTRELALQVEAECSKYLYKGLKSVCI-YGG 311
Query: 312 ASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQH 371
+ + + KG +I++AT GRL D+ ++L S+ ++VLDEAD+MLD+GF I
Sbjct: 312 GNRKGQIQDVTKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMK 371
Query: 372 VMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVL 431
++ PD RQT+M +A++P++ ++ + L M LD ++ +V
Sbjct: 372 ILL-DVRPD---RQTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVT 427
Query: 432 DEAD-RMLDMGFL 443
E + R L FL
Sbjct: 428 TEEEKRSLVKEFL 440
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 436 (158.5 bits), Expect = 7.8e-40, P = 7.8e-40
Identities = 103/263 (39%), Positives = 152/263 (57%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G +I+V T GR+ DIL + RI+ L V F+VLDEADRM DMGF I ++ S
Sbjct: 630 KRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVD-SIR 688
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGIIGGA----STDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + K + + II G S+D+ Q + P
Sbjct: 689 PD---RQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVRPTETRFRR 745
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
G +++F + D + L ++ S+HGS+ Q+ R++ I DFK K
Sbjct: 746 LIELLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNK 805
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
+L+AT +ASRGLDIK + V+N+D P +++YVHR+GRTGR GN+G A +F PD++
Sbjct: 806 VKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEE 865
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
+ +++ LEQ+G VP+ L+
Sbjct: 866 -RFSSSIIKALEQSGSKVPDELR 887
Score = 426 (155.0 bits), Expect = 9.1e-39, P = 9.1e-39
Identities = 111/247 (44%), Positives = 151/247 (61%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
VK++G + P+PI+S+ AGL E + LKK Y KPT IQ IPA + GRDL+G A+TG
Sbjct: 497 VKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTG 556
Query: 246 SGKTAAFLIPIMHHLLESPGELV-TGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
SGKT AFL+P+ H+L P G A +I +PTREL +QIH V CK +S VL
Sbjct: 557 SGKTLAFLLPMFRHILAQPKSAPGEGMIA----LIMSPTRELALQIH-VECK-KFSKVLG 610
Query: 305 I---CLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEAD 358
+ C+ YGGAS +L++G +I+V T GR+ DIL + RI+ L V F+VLDEAD
Sbjct: 611 LRTACV-YGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEAD 669
Query: 359 RMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDR 418
RM DMGF I ++ S PD RQT+MFSATFP ++ N+ + + +I+
Sbjct: 670 RMFDMGFGPQINCIVD-SIRPD---RQTIMFSATFPPKVE----NVAKKILNKPLEIIAG 721
Query: 419 GRISLAS 425
GR ++S
Sbjct: 722 GRSIVSS 728
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 433 (157.5 bits), Expect = 9.3e-40, P = 9.3e-40
Identities = 99/223 (44%), Positives = 133/223 (59%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ +KVSG PP+P SF G E L+ ++KS YT+PTPIQ +P L GRD +G A+
Sbjct: 243 LNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAK 302
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ PI+ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 303 TGSGKTAAFIWPILVHIMDQK-ELEPG--EGPIAVIVCPTRELCQQIHAECKRFGKAYGL 359
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + SL V F+V DEADRM DM
Sbjct: 360 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFDM 419
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +ILV
Sbjct: 420 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILV 458
Score = 408 (148.7 bits), Expect = 4.6e-37, P = 4.6e-37
Identities = 106/260 (40%), Positives = 144/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + SL V F+V DEADRM DMGF ++ + H PD
Sbjct: 378 QEGAEIVVCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIASH-VRPD- 435
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTI--LEVPXXXXXXXX 509
RQTL+FSATF + I+K + I + G IG A+ D+ Q + L+
Sbjct: 436 --RQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQIVEVLQSGQDKWGWLT 493
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V+VFV+ N + +A L + + +HG QS+R + I DFK K +
Sbjct: 494 RRLVEFTSAGSVLVFVTKKANCEELATNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNL 553
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VA+RGLDI IR V+NYD+ ++ID + HRIGRTGR G KG A + +D +
Sbjct: 554 PVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTT-KDTS 612
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 613 FAGDLVRNLEGANQSVSKDL 632
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 97/259 (37%), Positives = 152/259 (58%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G + +AT GRL D+L+ G+ +L V ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 247 RGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQ-IRPD-- 303
Query: 460 NRQTLMFSATFPETIQ-------KNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQTLM+SAT+P+ ++ +++I + +G + ++ + I+EV
Sbjct: 304 -RQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIR 362
Query: 513 XXXXDEDG------VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKT 566
DG +++FV T R AD I +L + SIHG + Q++R+ + FKT
Sbjct: 363 HMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT 422
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
K ++VAT VASRG+D++ I HV+NYD P ++Y+HRIGRTGR G KG A +F+ +
Sbjct: 423 GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTEN 482
Query: 627 DGAIAKDLVRILEQAGQPV 645
A+DL+ +L++A Q +
Sbjct: 483 SKQ-ARDLLGVLQEAKQEI 500
Score = 386 (140.9 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 87/218 (39%), Positives = 126/218 (57%)
Query: 188 VSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSG 247
V G + P+P+E+F+ AG ++ +K + PT IQ P L GRD++G A+TGSG
Sbjct: 115 VQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSG 174
Query: 248 KTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICL 307
KT + +P + H+ P L G P V+I APTREL +QI K+ SS ++
Sbjct: 175 KTLTYCLPAIVHINAQP-LLAPG--DGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTC 231
Query: 308 HYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLG 367
YGG R L +G + +AT GRL D+L+ G+ +L V ++VLDEADRMLDMGF
Sbjct: 232 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEP 291
Query: 368 DIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
I+ ++ PD RQTLM+SAT+P+ ++ + L
Sbjct: 292 QIRKIIGQ-IRPD---RQTLMWSATWPKEVRNMAADFL 325
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 321 (118.1 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
Identities = 72/201 (35%), Positives = 124/201 (61%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF S GL + ++ N+ K Y +PTPIQ+ IP +EGRD++G A+TGSGKTAAF++P++
Sbjct: 100 SFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIE 159
Query: 259 HLLE-SPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGAS-SMH 316
L PG + +I +P+REL +Q ++ ++++ + L+ + GG S
Sbjct: 160 RLKSRQPGGV--------RAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEED 211
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
F++ + K +I+V T GR + + L +V+++V DEADR+ +MGF + ++ +
Sbjct: 212 FSKMMTKP-DIIVCTPGRFLHLKVEMQYDLMTVQYIVFDEADRLFEMGFAEQLNELL--A 268
Query: 377 TMPDVANRQTLMFSATFPETI 397
++P +NRQ+L+FSAT P ++
Sbjct: 269 SLP--SNRQSLLFSATLPRSL 287
Score = 178 (67.7 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
Identities = 38/99 (38%), Positives = 58/99 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVFV T + +++ L + + I+G+ Q R+ ++ F+ VLV T VA+RG
Sbjct: 398 IVFVPTKHHVEYVTKLLRDAGYLVSYIYGTLDQHARKNQLYQFRVGLTNVLVVTDVAARG 457
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATS 620
+DI + +VIN+ LP ++HR+GRT R GNKG A S
Sbjct: 458 IDIPVLANVINFTLPASSKIFIHRVGRTARAGNKGWAYS 496
Score = 126 (49.4 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 403 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 462
+I+V T GR + + L +V+++V DEADR+ +MGF + ++ +++P +NRQ
Sbjct: 220 DIIVCTPGRFLHLKVEMQYDLMTVQYIVFDEADRLFEMGFAEQLNELL--ASLP--SNRQ 275
Query: 463 TLMFSATFPETI 474
+L+FSAT P ++
Sbjct: 276 SLLFSATLPRSL 287
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 433 (157.5 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 106/263 (40%), Positives = 150/263 (57%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ DIL G+I+ L V F+V+DEADRM DMGF I ++Q+
Sbjct: 650 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQN-IR 708
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAST---DVVQTILEVPXXXXXXX 508
P+ RQT++FSATFP ET+ + + V I +GG S D+ Q + P
Sbjct: 709 PE---RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLR 765
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G ++VFV + D + + ++ S+HG + Q+ RE I DFK
Sbjct: 766 LLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKND 825
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
+L+AT+VA+RGLD+K + V+N+D P ++YVHR+GRTGR G KG A +F D D
Sbjct: 826 VCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED-D 884
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A DLV+ LE + QPVP+ LK
Sbjct: 885 AKYAPDLVKALELSEQPVPDDLK 907
Score = 411 (149.7 bits), Expect = 3.8e-37, P = 3.8e-37
Identities = 105/272 (38%), Positives = 156/272 (57%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
+ +E+KV G + PRPI+ + GL ++ +KK NY KP PIQ A+P + GRD +G
Sbjct: 513 KELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGV 572
Query: 242 AQTGSGKTAAFLIPIMHHLLESPG-ELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKT F++P++ H+ + P E G P ++ APTRELV QIH K++
Sbjct: 573 AKTGSGKTLGFVLPMLRHIKDQPPVEAGDG----PIGLVMAPTRELVQQIHSDIRKFSKP 628
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEA 357
++ YGG+ +L++G I+V T GR+ DIL G+I+ L V F+V+DEA
Sbjct: 629 LGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 688
Query: 358 DRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFP---ETIQKKGCNILVATMGRLKD 414
DRM DMGF I ++Q+ P+ RQT++FSATFP ET+ +K N V +
Sbjct: 689 DRMFDMGFEPQITRIIQN-IRPE---RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRS 744
Query: 415 ILDRGRISLASVRFVVLDEADRMLDM-GFLGD 445
++++ L VR E+DR L + LG+
Sbjct: 745 VVNKDITQLVEVR----PESDRFLRLLELLGE 772
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 429 (156.1 bits), Expect = 3.5e-39, P = 3.5e-39
Identities = 95/223 (42%), Positives = 136/223 (60%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V G P+PI+++ G+ ++ LKK NY KPTPIQ AIPA + GRDL+G A+TG
Sbjct: 345 ISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 404
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKI 305
SGKT AFL+P+ H+L+ + G P +I PTREL +QI + K++ S L++
Sbjct: 405 SGKTIAFLLPMFRHILD---QRPVGEAEGPLAVIMTPTRELALQITKECKKFSKSLALRV 461
Query: 306 CLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLD 362
YGG +L++G I+V T GR+ D+L + GR++ L V +VV+DEADRM D
Sbjct: 462 VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFD 521
Query: 363 MGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
MGF + ++ + PD RQT+MFSATFP T++ IL
Sbjct: 522 MGFEPQVMRIVDN-VRPD---RQTVMFSATFPRTMEALARRIL 560
Score = 403 (146.9 bits), Expect = 8.5e-36, P = 8.5e-36
Identities = 101/263 (38%), Positives = 148/263 (56%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VV+DEADRM DMGF + ++ +
Sbjct: 478 KRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDN-VR 536
Query: 456 PDVANRQTLMFSATFPETIQ---KNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP T++ + + V + +GG S +DV Q ++ +
Sbjct: 537 PD---RQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLK 593
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L + S+HG Q R+ I+DFK
Sbjct: 594 LLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNG 653
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
++LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F Q
Sbjct: 654 ACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQ- 712
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
+ D+++ LE +G VP L+
Sbjct: 713 ARYSGDILKALELSGSSVPAELE 735
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 424 (154.3 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 95/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P L GRD++G A+
Sbjct: 239 LNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHAECKRFGKAYNL 355
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDM 415
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 416 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 454
Score = 400 (145.9 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 107/260 (41%), Positives = 143/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 374 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 431
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQT--ILEVPXXXXXXXX 509
RQTL+FSATF + I+K + I + G IG A+ DV Q IL
Sbjct: 432 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + +HG QS+R + I DFK K +
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 550 PVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 608
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 609 FAGDLVRNLEGANQHVSKEL 628
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 424 (154.3 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 95/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P L GRD++G A+
Sbjct: 239 LNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHAECKRFGKAYNL 355
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDM 415
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 416 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 454
Score = 396 (144.5 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 107/260 (41%), Positives = 143/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 374 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 431
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQT--ILEVPXXXXXXXX 509
RQTL+FSATF + I+K + I + G IG A+ DV Q IL
Sbjct: 432 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + +HG QS+R + I DFK K +
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVILDFKKKDI 549
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 550 PVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 608
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 609 FAGDLVRNLEGANQHVSKEL 628
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 424 (154.3 bits), Expect = 9.3e-39, P = 9.3e-39
Identities = 95/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P L GRD++G A+
Sbjct: 239 LNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHAECKRFGKAYNL 355
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDM 415
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 416 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 454
Score = 398 (145.2 bits), Expect = 6.4e-35, P = 6.4e-35
Identities = 107/260 (41%), Positives = 143/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 374 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 431
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQT--ILEVPXXXXXXXX 509
RQTL+FSATF + I+K + I + G IG A+ DV Q IL
Sbjct: 432 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + +HG QS+R + I DFK K +
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 550 PVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 608
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 609 FAGDLVRNLEGANQHVSKEL 628
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 424 (154.3 bits), Expect = 9.4e-39, P = 9.4e-39
Identities = 95/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P L GRD++G A+
Sbjct: 239 LNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHAECKRFGKAYNL 355
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDM 415
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 416 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 454
Score = 398 (145.2 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 107/260 (41%), Positives = 143/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 374 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 431
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQT--ILEVPXXXXXXXX 509
RQTL+FSATF + I+K + I + G IG A+ DV Q IL
Sbjct: 432 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + +HG QS+R + I DFK K +
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 550 PVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 608
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 609 FAGDLVRNLEGANQHVSKEL 628
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 424 (154.3 bits), Expect = 9.5e-39, P = 9.5e-39
Identities = 95/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P L GRD++G A+
Sbjct: 239 LNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHAEGKRFGKAYNL 355
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDM 415
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 416 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 454
Score = 398 (145.2 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 107/260 (41%), Positives = 143/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 374 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 431
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQT--ILEVPXXXXXXXX 509
RQTL+FSATF + I+K + I + G IG A+ DV Q IL
Sbjct: 432 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + +HG QS+R + I DFK K +
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 550 PVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 608
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 609 FAGDLVRNLEGANQHVSKEL 628
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 424 (154.3 bits), Expect = 9.6e-39, P = 9.6e-39
Identities = 95/223 (42%), Positives = 134/223 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++VSG PPRP SF G E L+ ++KS YT+PTPIQ +P L GRD++G A+
Sbjct: 239 LNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHAECKRFGKAYNL 355
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
+ YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDM 415
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
GF ++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 416 GFEYQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 454
Score = 399 (145.5 bits), Expect = 4.7e-35, P = 4.7e-35
Identities = 106/259 (40%), Positives = 144/259 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 374 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 431
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTL+FSATF + I+K + I + G IG A+ DV Q + +
Sbjct: 432 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGSKWNWLTR 489
Query: 512 XXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
G V++FV+ NA+ +A L + +HG QS+R + I DFK K +
Sbjct: 490 RLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIP 549
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
VLVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 550 VLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSNF 608
Query: 631 AKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 609 AGDLVRNLEGANQHVSKEL 627
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 276 (102.2 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 83/262 (31%), Positives = 137/262 (52%)
Query: 183 NVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCA 242
N E + G N +++F++ GL E L++ + + KP+ IQ+ I L G D +G A
Sbjct: 9 NNENDIEG-NTEEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQA 67
Query: 243 QTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSV 302
Q+G+GKTA F+I + L+ + V C + +I APTREL QI +V A
Sbjct: 68 QSGTGKTATFVISSLQ-LINY--DYVA--C---QALILAPTRELAQQIQKVVL--ALGDY 117
Query: 303 LKICLH--YGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
LK+ H GG +L++G +++V T GR+ D++D+ + + ++ +LDEAD M
Sbjct: 118 LKVKCHACVGGTVVREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEM 177
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDIL-DRG 419
L GF I V + +PD+ Q +FSAT P+ I + + M K IL +
Sbjct: 178 LSRGFKAQIYEVFK-KLVPDI---QVALFSATMPQEILE----LTTRFMRDPKTILVKKD 229
Query: 420 RISLASVR--FVVLDEADRMLD 439
++L +R +V +++ + LD
Sbjct: 230 ELTLEGIRQFYVAVEKEEWKLD 251
Score = 193 (73.0 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
I++ +T + D + + + +HG Q R+ + +F++ +VLV T + +RG
Sbjct: 266 IIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARG 325
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILE 639
+D++ + VINYDLP D Y+HRIGR+GR G KG A +F D KD ++ +E
Sbjct: 326 IDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDK---EKDKLKKIE 380
Score = 133 (51.9 bits), Expect = 9.6e-22, Sum P(2) = 9.6e-22
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K+G +++V T GR+ D++D+ + + ++ +LDEAD ML GF I V + +PD+
Sbjct: 139 KQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFK-KLVPDI 197
Query: 459 ANRQTLMFSATFPETI 474
Q +FSAT P+ I
Sbjct: 198 ---QVALFSATMPQEI 210
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 276 (102.2 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 83/262 (31%), Positives = 137/262 (52%)
Query: 183 NVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCA 242
N E + G N +++F++ GL E L++ + + KP+ IQ+ I L G D +G A
Sbjct: 9 NNENDIEG-NTEEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQA 67
Query: 243 QTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSV 302
Q+G+GKTA F+I + L+ + V C + +I APTREL QI +V A
Sbjct: 68 QSGTGKTATFVISSLQ-LINY--DYVA--C---QALILAPTRELAQQIQKVVL--ALGDY 117
Query: 303 LKICLH--YGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
LK+ H GG +L++G +++V T GR+ D++D+ + + ++ +LDEAD M
Sbjct: 118 LKVKCHACVGGTVVREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEM 177
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDIL-DRG 419
L GF I V + +PD+ Q +FSAT P+ I + + M K IL +
Sbjct: 178 LSRGFKAQIYEVFK-KLVPDI---QVALFSATMPQEILE----LTTRFMRDPKTILVKKD 229
Query: 420 RISLASVR--FVVLDEADRMLD 439
++L +R +V +++ + LD
Sbjct: 230 ELTLEGIRQFYVAVEKEEWKLD 251
Score = 193 (73.0 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
I++ +T + D + + + +HG Q R+ + +F++ +VLV T + +RG
Sbjct: 266 IIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARG 325
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILE 639
+D++ + VINYDLP D Y+HRIGR+GR G KG A +F D KD ++ +E
Sbjct: 326 IDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDK---EKDKLKKIE 380
Score = 133 (51.9 bits), Expect = 9.6e-22, Sum P(2) = 9.6e-22
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K+G +++V T GR+ D++D+ + + ++ +LDEAD ML GF I V + +PD+
Sbjct: 139 KQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFK-KLVPDI 197
Query: 459 ANRQTLMFSATFPETI 474
Q +FSAT P+ I
Sbjct: 198 ---QVALFSATMPQEI 210
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 311 (114.5 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 76/199 (38%), Positives = 120/199 (60%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
F+S L + L+K + K + PTPIQ+ +IP L+G D++G A+TGSGKT AF+IP++
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNR 319
L G+ T + +I +PTREL +Q +V ++ + L+ L GG S
Sbjct: 292 L----GDHSTTVGVR--AVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFT 345
Query: 320 QLEKGCNILVATMGRLKD-ILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 378
L + +I++AT GRL +L+ G +SL+ V+++V DEADR+ +MGF + ++ S +
Sbjct: 346 DLARNPDIIIATPGRLMHHLLETG-MSLSKVQYIVFDEADRLFEMGFNEQLTEIL--SKL 402
Query: 379 PDVANRQTLMFSATFPETI 397
+ NRQTL+FSAT P +
Sbjct: 403 SE--NRQTLLFSATLPSLL 419
Score = 183 (69.5 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 40/109 (36%), Positives = 63/109 (57%)
Query: 518 EDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAV 577
+ I+FVST + +FI L IA+T IHG R+ + F++ ++ V+V T +
Sbjct: 497 KSSTIIFVSTKYHVEFIHILLERAGIASTYIHGYLDPVARKINLAKFRSHQVGVMVVTDL 556
Query: 578 ASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
A+RG+DI + +VIN+D P + ++HR+GR R G G A S PD+
Sbjct: 557 AARGIDIPLLDNVINFDFPPKEKIFIHRVGRVARAGRSGIAYSLVSPDE 605
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 47/172 (27%), Positives = 87/172 (50%)
Query: 403 NILVATMGRLKD-ILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANR 461
+I++AT GRL +L+ G +SL+ V+++V DEADR+ +MGF + ++ S + + NR
Sbjct: 352 DIIIATPGRLMHHLLETG-MSLSKVQYIVFDEADRLFEMGFNEQLTEIL--SKLSE--NR 406
Query: 462 QTLMFSATFPETIQKNYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXXXXXDEDGV 521
QTL+FSAT P + F+ G+ + ++ + ++ GV
Sbjct: 407 QTLLFSATLPSLLVD---FVRAGL---NNPKLINLDTDTKISENLSLSFFTLRHEEKLGV 460
Query: 522 IVFVSTIRNADFIACYLCETEIATTSI--HGSRLQSQREQAIHDFKTKKMKV 571
++F+ +++ + L TE TT+ + S Q Q++ + F + K V
Sbjct: 461 LLFL--LKDIIYKKPQLPTTETTTTTTTNNESNQQQQKKSSTIIFVSTKYHV 510
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 424 (154.3 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 104/263 (39%), Positives = 148/263 (56%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 492 KRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDN-VR 550
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + + +GG S +DV Q ++ +
Sbjct: 551 PD---RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLK 607
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L S+HG Q R+ I+DFK
Sbjct: 608 LLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNG 667
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F DQ
Sbjct: 668 TCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQ- 726
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D+++ LE +G P+P L+
Sbjct: 727 ARYAGDIIKALELSGNPIPADLE 749
Score = 412 (150.1 bits), Expect = 2.3e-37, P = 2.3e-37
Identities = 105/282 (37%), Positives = 157/282 (55%)
Query: 173 QTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAG 232
Q +N E + V G P+PI+++ G+ ++ LKK Y KPTPIQ AIPA
Sbjct: 346 QEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQAIPAI 405
Query: 233 LEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHE 292
+ GRDL+G A+TGSGKT AFL+P+ H+++ L G P +I PTREL +QI +
Sbjct: 406 MNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRA-LEEG--EGPIAVIMTPTRELALQITK 462
Query: 293 VACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASV 349
K++ + L++ YGG +L++G I+V T GR+ D+L + GR++ L V
Sbjct: 463 ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRV 522
Query: 350 RFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATM 409
+VVLDEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL +
Sbjct: 523 TYVVLDEADRMFDMGFEPQVMRIVDN-VRPD---RQTVMFSATFPRAMEALARRILSKPI 578
Query: 410 GRLKDILDRGRISLAS---VRFVVLDEADRMLDM-GFLGDIQ 447
++ GR + S +V++E ++ L + LG Q
Sbjct: 579 ----EVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQ 616
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 422 (153.6 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 95/220 (43%), Positives = 132/220 (60%)
Query: 187 KVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGS 246
+VSG PPRP SF G E L+ ++KS YT+PTPIQ +P L GRD++G A+TGS
Sbjct: 242 RVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGS 301
Query: 247 GKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKIC 306
GKTAAF+ P++ H+++ EL G P +I PTREL QIH ++ + L+
Sbjct: 302 GKTAAFIWPMLIHIMDQK-ELEPG--DGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSV 358
Query: 307 LHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFL 366
YGG S + L++G I+V T GRL D + + +L V ++V DEADRM DMGF
Sbjct: 359 AVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFE 418
Query: 367 GDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
++ + H PD RQTL+FSATF + I+K +IL+
Sbjct: 419 YQVRSIASH-VRPD---RQTLLFSATFRKKIEKLARDILI 454
Score = 398 (145.2 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 107/260 (41%), Positives = 143/260 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I+V T GRL D + + +L V ++V DEADRM DMGF ++ + H PD
Sbjct: 374 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH-VRPD- 431
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQT--ILEVPXXXXXXXX 509
RQTL+FSATF + I+K + I + G IG A+ DV Q IL
Sbjct: 432 --RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
V++FV+ NA+ +A L + +HG QS+R + I DFK K +
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VLVAT VA+RGLDI I+ VINYD+ ++ID + HRIGRTGR G KG A + P +D
Sbjct: 550 PVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTP-KDSN 608
Query: 630 IAKDLVRILEQAGQPVPEFL 649
A DLVR LE A Q V + L
Sbjct: 609 FAGDLVRNLEGANQHVSKEL 628
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 419 (152.6 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 99/251 (39%), Positives = 148/251 (58%)
Query: 155 YIPKDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLK 214
Y P + D E+ SG+ + + ++VSG + RP+++FE G ++ +K
Sbjct: 185 YEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIK 244
Query: 215 KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQ 274
K Y KPT IQ A+P L GRD++G A+TGSGKTAAF++P++ H+++ P EL
Sbjct: 245 KQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQP-ELQRD--EG 301
Query: 275 PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGR 334
P +ICAPTREL QI A K++ + L++ YGG S ++L+ GC I+VAT GR
Sbjct: 302 PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGR 361
Query: 335 LKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFP 394
L D+L +++ ++VLDEADRM D+GF ++ ++ PD RQTL+FSAT P
Sbjct: 362 LIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQ-IRPD---RQTLLFSATMP 417
Query: 395 ETIQKKGCNIL 405
++K IL
Sbjct: 418 WKVEKLAREIL 428
Score = 393 (143.4 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 94/257 (36%), Positives = 139/257 (54%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K GC I+VAT GRL D+L +++ ++VLDEADRM D+GF ++ ++ PD
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQ-IRPD- 406
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXX--XX 509
RQTL+FSAT P ++K + I + VG +G A+ D+ Q + +P
Sbjct: 407 --RQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLL 464
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
DE V+VF S D I L ++HG + Q+ R + + FK+
Sbjct: 465 EKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVH 524
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
VL+AT VA+RGLDIK ++ V+NYD+ +++D +VHRIGRTGR G++ ++
Sbjct: 525 HVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREAR 584
Query: 630 IAKDLVRILEQAGQPVP 646
A +LV L AGQ VP
Sbjct: 585 FAGELVNSLVAAGQNVP 601
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 415 (151.1 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 102/259 (39%), Positives = 149/259 (57%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +I++AT GRL D+ I+L S+ ++ +EADRMLDMGF I ++ PD
Sbjct: 362 KGVDIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQIMKILI-DVRPD-- 417
Query: 460 NRQTLMFSATFPETIQ---KNYI----FIAVGIIGGASTDVV-QTILEV-PXXXXXXXXX 510
RQT+M SAT+P+ ++ K+Y+ + VG + A+ + V Q ++ +
Sbjct: 418 -RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVIVINEEEKKAFMEN 476
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
+D I+FV AD IA L + S+HG R Q REQA+ DFK K++
Sbjct: 477 FIDSMKPKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVR 536
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+LVAT +ASRGLD+ I HV N+D P+ I+EYVHR+GRTGR G G+A + +D
Sbjct: 537 ILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITK-KDWKA 595
Query: 631 AKDLVRILEQAGQPVPEFL 649
A +L+ IL++A Q VP+ L
Sbjct: 596 ASELIDILQRAKQVVPDEL 614
Score = 365 (133.5 bits), Expect = 3.8e-31, P = 3.8e-31
Identities = 87/244 (35%), Positives = 135/244 (55%)
Query: 194 PRPIESFESAGLR-EILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAF 252
P P+ FE + ++ N++K+ + KPTPIQ A P L+G DL+G AQTG+GKT A+
Sbjct: 235 PNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAY 294
Query: 253 LIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGA 312
L+P HL P + P +++ APTREL +Q+ KY Y IC++ GG
Sbjct: 295 LMPGFIHLASQP--IPKDKRGGPGMLVLAPTRELALQVEAECLKYTYKGFKSICIYGGGD 352
Query: 313 SSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHV 372
N + KG +I++AT GRL D+ I+L S+ ++ +EADRMLDMGF I +
Sbjct: 353 RKAQIN-VVTKGVDIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQIMKI 410
Query: 373 MQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLD 432
+ PD RQT+M SAT+P+ +++ + L M LD ++ + +V++
Sbjct: 411 LI-DVRPD---RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVIVIN 466
Query: 433 EADR 436
E ++
Sbjct: 467 EEEK 470
>ASPGD|ASPL0000054300 [details] [associations]
symbol:AN0583 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 RefSeq:XP_658187.1 ProteinModelPortal:Q5BFU7
STRING:Q5BFU7 EnsemblFungi:CADANIAT00002094 GeneID:2876361
KEGG:ani:AN0583.2 HOGENOM:HOG000246455 OMA:HLKVEMN
OrthoDB:EOG4JWZP1 Uniprot:Q5BFU7
Length = 936
Score = 295 (108.9 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 71/198 (35%), Positives = 117/198 (59%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
F++ GL L+K + + ++ PTPIQ+ IP +E +D++G A+TGSGKTAAF+IP++
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNR 319
L T + A+ +I +P+REL +Q +V + + LK L GG S
Sbjct: 153 LKSHS----TKFGARG--LILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFG 206
Query: 320 QLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 379
+ +I++AT GR + + L+S+++VV DEADR+ +MGF + ++ H +P
Sbjct: 207 MMAGNPDIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEIL-HG-LP 264
Query: 380 DVANRQTLMFSATFPETI 397
+ RQTL+FSAT P+++
Sbjct: 265 --STRQTLLFSATLPKSL 280
Score = 196 (74.1 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 44/113 (38%), Positives = 65/113 (57%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
IVF +T + D++ L E A + ++GS Q+ R+ + +F+T +LV T VA+RG
Sbjct: 377 IVFAATKHHVDYLYSLLREAGFAVSYVYGSLDQTARKIQVQNFRTGISNILVVTDVAARG 436
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDL 634
+DI + +VINYD P + +VHR+GRT R G KG + S D D DL
Sbjct: 437 IDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVR-DADAPYLLDL 488
Score = 137 (53.3 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 28/72 (38%), Positives = 48/72 (66%)
Query: 403 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 462
+I++AT GR + + L+S+++VV DEADR+ +MGF + ++ H +P + RQ
Sbjct: 213 DIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEIL-HG-LP--STRQ 268
Query: 463 TLMFSATFPETI 474
TL+FSAT P+++
Sbjct: 269 TLLFSATLPKSL 280
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 103/265 (38%), Positives = 151/265 (56%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV- 458
K ++++ T GRL D+++ G I + V ++VLDEADRMLD GF DI++++ H+ P
Sbjct: 284 KNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRN 343
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQT--ILEVPXXXXXXX 508
+RQT+ FSAT+PE+++ K+ + I +G AS ++ Q IL+ P
Sbjct: 344 GSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERML 403
Query: 509 XXXX----XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDF 564
+D +++FV + A + L + IHG Q R QA++DF
Sbjct: 404 DNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLAR-KYNVVGIHGDMSQGARLQALNDF 462
Query: 565 KTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDP 624
K+ K VLVAT VA+RGLDI ++ VIN P I++YVHRIGRTGR KG A +F+ P
Sbjct: 463 KSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTP 522
Query: 625 DQDGAIAKDLVRILEQAGQPVPEFL 649
QD + A +LV +L QA Q +PE L
Sbjct: 523 -QDKSHAGELVNVLRQAKQDIPEGL 546
Score = 345 (126.5 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 83/211 (39%), Positives = 123/211 (58%)
Query: 196 PIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIP 255
PI F+ + L + LK NY +PTPIQ P L GRD++G A+TGSGKT AF IP
Sbjct: 165 PILQFDELDVSAKLREGLK--NYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIP 222
Query: 256 IMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSM 315
+ +L G ++ + P V++ +PTREL +Q +E + LK + YGGA
Sbjct: 223 ALQYL---NG--LSDNKSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKS 277
Query: 316 HFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQH 375
R K ++++ T GRL D+++ G I + V ++VLDEADRMLD GF DI++++ H
Sbjct: 278 EQARAA-KNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISH 336
Query: 376 STMPDV-ANRQTLMFSATFPETIQKKGCNIL 405
+ P +RQT+ FSAT+PE+++ L
Sbjct: 337 TPDPTRNGSRQTVFFSATWPESVRALAATFL 367
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 421 (153.3 bits), Expect = 2.8e-38, P = 2.8e-38
Identities = 104/258 (40%), Positives = 148/258 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +I+VAT GRL DIL+ I V +VLDEADRMLDMGF I+ ++ +P
Sbjct: 555 ERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNE--IPP- 611
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGG-ASTDVVQTILEVPXXXXXXXXX 510
RQTLM++AT+P+ ++K N + + +G + A+ + +EV
Sbjct: 612 -RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRL 670
Query: 511 XXXXXXDEDG--VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
E G VI+F ST R D +A + IHG + Q +R+ ++ F++ K
Sbjct: 671 EQILRSQERGSKVIIFCSTKRLCDHLARSVGR-HFGAVVIHGDKTQGERDWVLNQFRSGK 729
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG 628
VL+AT VA+RGLDIK IR VINYD P +++YVHRIGRTGR G G A +F+ +QD
Sbjct: 730 SCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFT-EQDW 788
Query: 629 AIAKDLVRILEQAGQPVP 646
A DL+++LE A Q VP
Sbjct: 789 KYAPDLIKVLEGANQQVP 806
Score = 403 (146.9 bits), Expect = 9.4e-36, P = 9.4e-36
Identities = 100/259 (38%), Positives = 146/259 (56%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
EV +G+N P P +FES+GL +++ L + + PTPIQ P L+ RD++ A+T
Sbjct: 422 EVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKT 481
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT +LIP L + G P V+I APTREL QI + A ++ SS +
Sbjct: 482 GSGKTLGYLIPAFILLRHCRNDSRNG----PTVLILAPTRELATQIQDEALRFGRSSRIS 537
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA ++LE+G +I+VAT GRL DIL+ I V +VLDEADRMLDMG
Sbjct: 538 CTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMG 597
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV----ATMGRLKDILDRGR 420
F I+ ++ +P RQTLM++AT+P+ ++K ++LV +GR+ ++
Sbjct: 598 FEPQIRKIVNE--IPP--RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKA 653
Query: 421 ISLASVRFVVLDEADRMLD 439
I+ V V E +R L+
Sbjct: 654 IT-QYVEVVPQMEKERRLE 671
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 416 (151.5 bits), Expect = 2.8e-38, P = 2.8e-38
Identities = 95/260 (36%), Positives = 152/260 (58%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++GC I++AT GRL D L G +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 402 QRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQ-IRPD- 459
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEV-----PXXXXX 506
RQTLM+SAT+P+ +++ NYI I +G + ++ ++ +++V
Sbjct: 460 --RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLK 517
Query: 507 XXXXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFK 565
+ G +I+FV T R D + ++ + +IHG + QS+R+ + +F+
Sbjct: 518 TLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFR 577
Query: 566 TKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
+ K +LVAT VA+RGLD+ GI++VIN+D PQ ++Y+HRIGRTGR KG + +F+ +
Sbjct: 578 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 637
Query: 626 QDGAIAKDLVRILEQAGQPV 645
+ AK LV +L +A Q +
Sbjct: 638 -NAKQAKALVDVLREANQEI 656
Score = 374 (136.7 bits), Expect = 4.8e-32, P = 4.8e-32
Identities = 84/219 (38%), Positives = 127/219 (57%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E E+ V G P PI+ F L + ++K +++ Y PT IQ P + G + +G
Sbjct: 266 EEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGI 324
Query: 242 AQTGSGKTAAFLIPIMHHLL-ESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKT +++P + H+ + P + G P ++ APTREL QI +VA ++ S
Sbjct: 325 AKTGSGKTLGYILPAIVHINNQQPLQRGDG----PIALVLAPTRELAQQIQQVATEFGSS 380
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
S ++ +GGA R L++GC I++AT GRL D L G +L ++VLDEADRM
Sbjct: 381 SYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRM 440
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
LDMGF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 441 LDMGFEPQIRKIVSQ-IRPD---RQTLMWSATWPKEVKQ 475
>TAIR|locus:2064844 [details] [associations]
symbol:AT2G40700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0006626 "protein targeting to mitochondrion"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009561 "megagametogenesis" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0042991 "transcription factor
import into nucleus" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HOGENOM:HOG000268799
EMBL:AJ010468 IPI:IPI00518934 PIR:G84832 PIR:T51746
RefSeq:NP_181602.1 UniGene:At.47 ProteinModelPortal:Q7XJN0
SMR:Q7XJN0 STRING:Q7XJN0 PaxDb:Q7XJN0 PRIDE:Q7XJN0
EnsemblPlants:AT2G40700.1 GeneID:818665 KEGG:ath:AT2G40700
GeneFarm:934 TAIR:At2g40700 InParanoid:Q7XJN0 OMA:HRFHWIV
PhylomeDB:Q7XJN0 ProtClustDB:CLSN2683635 Genevestigator:Q7XJN0
GermOnline:AT2G40700 Uniprot:Q7XJN0
Length = 609
Score = 411 (149.7 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 136/459 (29%), Positives = 212/459 (46%)
Query: 199 SFESAGLREILVKNLK-KSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIM 257
SF S GL L LK + + PT +Q AIP L GRD++ A TG+GKT A+L P++
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 258 HHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHY-GGASSMH 316
HHL ++ + VI+ PTREL +Q++E K + + + GG
Sbjct: 90 HHLQGHSPKVDRSHGTFALVIV--PTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAK 147
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLA--SVRFVVLDEADRMLDMGFLGDIQHVMQ 374
+L KG +IL+AT GRL D L + S ++R+V+ DEAD +L++G+ +I+ +++
Sbjct: 148 EKARLRKGISILIATPGRLLDHL-KNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIK 206
Query: 375 HSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEA 434
+ N Q P+ IQK+ +L AT+ + D ++SL + LD
Sbjct: 207 --LLGSGQNEQGEEDDIV-PKGIQKQNL-LLSATLN--DKVNDLAKLSLDDPVMIGLDNT 260
Query: 435 DRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATF--PETIQKNYIFIAVGIIGGASTD 492
++ M N+ S + P + + Y+ + G A
Sbjct: 261 KLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLS 320
Query: 493 VVQTILEVPXXXXXXXXXXXXXXXD-EDGVIVFVSTIRNADFIACYLCET--EIATTSIH 549
V++ + E D ++ N++ E + T +H
Sbjct: 321 VLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLH 380
Query: 550 GSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRT 609
GS Q R A FKT+K VL++T VA+RGLD +R +I YD P E EYVHR+GRT
Sbjct: 381 GSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRT 440
Query: 610 GRVGNKGRATSFYDPDQDGAIAKDLVRILEQAGQPVPEF 648
R+G KG A F P I D ++ L++ G + E+
Sbjct: 441 ARIGEKGEALLFLQP-----IEIDYLKELKKHGASLTEY 474
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 106/272 (38%), Positives = 155/272 (56%)
Query: 394 PETIQ--KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQ 451
PE ++ + G I++AT GRL D+ + G ISLASV +VVLDEADRMLDMGF I+ ++
Sbjct: 203 PEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRIL- 261
Query: 452 HSTMPDVANRQTLMFSATFPETIQK---NYIFIAVGIIGGA----STDVVQTILE-VPXX 503
PD R + SAT+PE ++K Y AV + G+ S V E VP
Sbjct: 262 FEIRPD---RLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHD 318
Query: 504 XXXXXX-----XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQRE 558
+I+FV + AD ++ C I + +HG R QS RE
Sbjct: 319 SRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDRE 378
Query: 559 QAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRA 618
+++ ++ ++++LVAT +ASRG+D+ I HV+NYD P +I+EYVHR+GRTGR G KG A
Sbjct: 379 MSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEA 438
Query: 619 TSFYDPDQDGAIAKDLVRILEQAGQPVPEFLK 650
SF + D + + L++ILE++ Q VP+ L+
Sbjct: 439 MSFLWWN-DRSNFEGLIQILEKSEQEVPDQLR 469
Score = 367 (134.2 bits), Expect = 9.1e-33, P = 9.1e-33
Identities = 88/210 (41%), Positives = 121/210 (57%)
Query: 194 PRPIESFESA-GLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAF 252
P P+ SFE A G ++ ++K+ + KP+PIQ P L G+D +G +QTGSGKT AF
Sbjct: 79 PPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAF 138
Query: 253 LIPIMHHLLESPGELVTGYCAQ---PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHY 309
L+P + H+ + Q P V++ +PTREL QI KY+Y+ +CL Y
Sbjct: 139 LLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCL-Y 197
Query: 310 GGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDI 369
GG S G I++AT GRL D+ + G ISLASV +VVLDEADRMLDMGF I
Sbjct: 198 GGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAI 257
Query: 370 QHVMQHSTMPDVANRQTLMFSATFPETIQK 399
+ ++ PD R + SAT+PE ++K
Sbjct: 258 RRIL-FEIRPD---RLVALTSATWPEGVRK 283
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 417 (151.9 bits), Expect = 3.6e-38, P = 3.6e-38
Identities = 92/216 (42%), Positives = 130/216 (60%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ + GD P P FE G + ++ ++K + KPT IQ P + GRDL+G AQT
Sbjct: 144 EITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQT 203
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS-VL 303
GSGKT A+++P + H+ P L G P ++ APTREL QI +VA ++ ++ V
Sbjct: 204 GSGKTLAYVLPAVVHINNQP-RLERG--DGPIALVLAPTRELAQQIQQVAIEFGSNTHVR 260
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
C+ +GGA R LE+G I++AT GRL D L+RG SL ++VLDEADRMLDM
Sbjct: 261 NTCI-FGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDM 319
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ +MQ PD RQ LM+SAT+P+ +++
Sbjct: 320 GFEPQIRKIMQQ-IRPD---RQVLMWSATWPKEVRQ 351
Score = 395 (144.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 95/263 (36%), Positives = 145/263 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I++AT GRL D L+RG SL ++VLDEADRMLDMGF I+ +MQ PD
Sbjct: 278 ERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQ-IRPD- 335
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIG-GASTDVVQTIL---EVPXXXXXX 507
RQ LM+SAT+P+ +++ NYI + +G + A+ +++Q + E
Sbjct: 336 --RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLI 393
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
+E I+FV T + D I + +IHG + Q +R+ + F+
Sbjct: 394 KLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNG 453
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
+ +LVAT VA+RGLD+ ++ VINYD P ++YVHRIGRTGR N G A + +
Sbjct: 454 RHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNA 513
Query: 628 GAIAKDLVRILEQAGQPV-PEFL 649
A DL+++L +A Q + P+ +
Sbjct: 514 NK-ANDLIQVLREANQTINPKLM 535
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 419 (152.6 bits), Expect = 3.9e-38, P = 3.9e-38
Identities = 102/266 (38%), Positives = 149/266 (56%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+VAT GR+ D+L ++GR+ SL ++VLDEADRM DMGF + + +
Sbjct: 499 KRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIFAN-VR 557
Query: 456 PDVANRQTLMFSATFPETIQ-------KNYIFIAVG---IIGGASTDVVQTILEVPXXXX 505
PD RQT++FSAT P+ + KN + I VG ++ T +V+ I +
Sbjct: 558 PD---RQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVE-IRDEKSKFN 613
Query: 506 XXXXXXXXXXXDEDGV--IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHD 563
D+D V ++FV AD + L S+HG + Q R+ I D
Sbjct: 614 RLLELLGELYKDDDDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGKDQVDRDSTISD 673
Query: 564 FKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYD 623
FK+ V++AT+VA+RGLD+K ++ V+NYD P +++YVHR GRTGR GN G A +F
Sbjct: 674 FKSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVT 733
Query: 624 PDQDGAIAKDLVRILEQAGQPVPEFL 649
+Q+ A + + LEQ+GQPVPE L
Sbjct: 734 EEQENC-AIGIAKALEQSGQPVPEKL 758
Score = 355 (130.0 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 86/214 (40%), Positives = 125/214 (58%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+KVSG + P+P++ + GL ++ + K Y KPT IQ A+P + GRD++G A+TG
Sbjct: 366 IKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTG 425
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSV-LK 304
SGKT AFL+P+ H+ + E V P +I PTREL +QI CK ++ L+
Sbjct: 426 SGKTMAFLLPMFRHIKDQ--EPVKDN-EGPIGLILTPTRELAVQIFR-DCKPFLKTLGLR 481
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRI-SLASVRFVVLDEADRML 361
YGG L++G I+VAT GR+ D+L ++GR+ SL ++VLDEADRM
Sbjct: 482 AVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMF 541
Query: 362 DMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPE 395
DMGF + + + PD RQT++FSAT P+
Sbjct: 542 DMGFEPQVMKIFAN-VRPD---RQTVLFSATMPK 571
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 96/249 (38%), Positives = 148/249 (59%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ G ++LVAT GRL D++ + + + +VLDEADRMLDMGF+ DI+ ++ + +P
Sbjct: 121 RHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKIL--ALLP-- 176
Query: 459 ANRQTLMFSATFPETIQK------NY-IFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
A RQ LMFSATF + I++ N+ + I+V A+T V Q I V
Sbjct: 177 AKRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKSALLIQ 236
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ V+VF T A+ +A L + EI+ +IHG++ Q R +A+ DFK+ +++V
Sbjct: 237 LIKQENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRV 296
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT +A+RGLDI + V+N+DLP ++YVHRIGRTGR G G+A S ++ +
Sbjct: 297 LVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEI-KLL 355
Query: 632 KDLVRILEQ 640
KD+ R++ +
Sbjct: 356 KDIERLINR 364
Score = 348 (127.6 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 81/201 (40%), Positives = 117/201 (58%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF + GL L K + + Y P+PIQ AIPA L G+D+M AQTG+GKTA F +P++
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 259 HLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFN 318
LL + +G Q ++ PTREL Q+ E Y L+ + +GG
Sbjct: 62 -LLAKGHKAKSG---QTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQI 117
Query: 319 RQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 378
+L G ++LVAT GRL D++ + + + +VLDEADRMLDMGF+ DI+ ++ + +
Sbjct: 118 NKLRHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKIL--ALL 175
Query: 379 PDVANRQTLMFSATFPETIQK 399
P A RQ LMFSATF + I++
Sbjct: 176 P--AKRQNLMFSATFSDEIRE 194
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 418 (152.2 bits), Expect = 7.4e-38, P = 7.4e-38
Identities = 102/263 (38%), Positives = 151/263 (57%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 631 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDN-VR 689
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGII-GGAST---DVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + +I GG S +V Q ++ +
Sbjct: 690 PD---RQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFK 746
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G +IVFV NAD + L + S+HG Q R+ I DFK+
Sbjct: 747 LLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSG 806
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+++L+AT+VA+RGLD+K + V+NYD+P ++YVHR GRTGR G KG A +F P+Q
Sbjct: 807 KVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQS 866
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D++R ++ +G +P L+
Sbjct: 867 -RYAGDIIRAMDLSGTLIPAELQ 888
Score = 400 (145.9 bits), Expect = 4.9e-35, P = 4.9e-35
Identities = 98/231 (42%), Positives = 143/231 (61%)
Query: 179 SGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDL 238
S E ++VK G P+PI+++ G+ + ++ L++ + KPTPIQ AIPA + GRDL
Sbjct: 493 SDLEGIQVK--GKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDL 550
Query: 239 MGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA 298
+G A+TGSGKT AF++P+ H+L+ P + G A II APTREL MQI + K++
Sbjct: 551 IGIAKTGSGKTLAFILPMFRHILDQPS-MEDGDGAI--AIIMAPTRELCMQIGKDIRKFS 607
Query: 299 YSSVLK-ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVL 354
S L+ +C+ YGG +L++G I+V T GR+ D+L + GR++ L V +VVL
Sbjct: 608 KSLGLRPVCV-YGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVL 666
Query: 355 DEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
DEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL
Sbjct: 667 DEADRMFDMGFEPQVMRIIDN-VRPD---RQTVMFSATFPRQMEALARRIL 713
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 414 (150.8 bits), Expect = 7.4e-38, P = 7.4e-38
Identities = 90/225 (40%), Positives = 137/225 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+ ++V G PPRP+ SF ++L++ ++KS Y +PTPIQ AIP+ L GRD++G A+
Sbjct: 251 MNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAK 310
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-YSSV 302
TGSGKTAA+L P + H+++ P +L G P +I PTREL +Q+ + A K+ ++
Sbjct: 311 TGSGKTAAYLWPAIVHIMDQP-DLKAG--EGPVAVIVVPTRELAIQVFQEAKKFCKVYNI 367
Query: 303 LKICLHYGGASSMHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRML 361
IC YGG S + +L+ +G ++V T GR+ D++ G + F+V DEADRM
Sbjct: 368 NPICA-YGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMF 426
Query: 362 DMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILV 406
DMGF ++ + H PD RQ LMFSATF + +++ + LV
Sbjct: 427 DMGFEAQVKSISDH-VRPD---RQCLMFSATFKQKVERLARDALV 467
Score = 370 (135.3 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 91/260 (35%), Positives = 144/260 (55%)
Query: 397 IQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 456
+Q +G ++V T GR+ D++ G + F+V DEADRM DMGF ++ + H P
Sbjct: 385 LQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDH-VRP 443
Query: 457 DVANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTI--LEVPXXXXXX 507
D RQ LMFSATF + +++ + + I G +G A+ D+ Q + ++
Sbjct: 444 D---RQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVFVMQNQDVKLHW 500
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
V++FV+ +++ +A L + +HG LQ++R + + F+ K
Sbjct: 501 LIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFR-K 559
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K ++LVAT VA+RGLDI IR VIN+D+ ++ID +VHRIGRTGR G+KG A + ++D
Sbjct: 560 KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVT-EKD 618
Query: 628 GAIAKDLVRILEQAGQPVPE 647
+ LV+ LE Q VP+
Sbjct: 619 IEMVGHLVKNLESVSQEVPK 638
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 416 (151.5 bits), Expect = 7.7e-38, P = 7.7e-38
Identities = 101/257 (39%), Positives = 147/257 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K GC I+VAT GRL D++ L V ++VLDEAD+M D GF + ++ H PD
Sbjct: 426 KAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNH-VRPD- 483
Query: 459 ANRQTLMFSATF-PE------TIQKNYIFIAVGIIGGASTDVVQTI--LEVPXXXXXXXX 509
RQTL+FSATF P TI + I I++G+IG A++D+ Q + L+
Sbjct: 484 --RQTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLT 541
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
+ V++FVST + ++ L + T ++HG + Q +R Q I FK K+
Sbjct: 542 NQLALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKI 601
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+L+AT VA+RGLDI I++V+NYD ++I+ + HRIGRTGR GN G A + P +D
Sbjct: 602 NILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITP-KDIH 660
Query: 630 IAKDLVRILEQAGQPVP 646
+ DL++ LE A Q VP
Sbjct: 661 FSVDLIKNLESASQFVP 677
Score = 401 (146.2 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 91/224 (40%), Positives = 132/224 (58%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
+N++++++G + P+ SF G +IL++ + K + PTPIQK AIP L GRDL+
Sbjct: 289 KNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAI 348
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS 301
A+TGSGKTA F+ P + H+++ P L G P + APTREL QI+ KY+
Sbjct: 349 AKTGSGKTATFIWPSISHIMDQP-YLEKG--DGPIALFLAPTRELAHQIYLETLKYSKYF 405
Query: 302 VLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRML 361
LK + YGG S ++L+ GC I+VAT GRL D++ L V ++VLDEAD+M
Sbjct: 406 KLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMF 465
Query: 362 DMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
D GF + ++ H PD RQTL+FSATF +++ IL
Sbjct: 466 DFGFGPQVLSIVNH-VRPD---RQTLLFSATFKPNVEEFARTIL 505
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 284 (105.0 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 81/211 (38%), Positives = 122/211 (57%)
Query: 188 VSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSG 247
VS P + F GL E ++ +K+ + T IQ+ IP L GRD++G A+TGSG
Sbjct: 118 VSLPQPDGGPKKFTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSG 177
Query: 248 KTAAFLIPIMHHL--LESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKY--AYSSVL 303
KT AFLIP + L L TG VI+ +PTREL +QI VA + A+S
Sbjct: 178 KTLAFLIPAIEMLSALRFKPRNGTG------VIVVSPTRELALQIFGVARELLTAHSQTY 231
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDR--GRISLASVRFVVLDEADRML 361
I + GGA+ +L KG N+L+AT GRL D L G + +++ +V+DEADR+L
Sbjct: 232 GIVI--GGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFV-FKNLKTLVIDEADRIL 288
Query: 362 DMGFLGDIQHVMQHSTMPDVANRQTLMFSAT 392
++GF +++ +++ +P+ +RQT++FSAT
Sbjct: 289 EVGFEDEMRQIIK--ILPN-EDRQTMLFSAT 316
Score = 195 (73.7 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 44/129 (34%), Positives = 69/129 (53%)
Query: 521 VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASR 580
+IVF S+ + A L ++ +HG + Q +R +F K VL+ T VA+R
Sbjct: 378 IIVFFSSCNCVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGVLICTDVAAR 437
Query: 581 GLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGN-KGRATSFYDPDQDGAIAKDLVRILE 639
GLDI + +I +D P + +Y+HR+GRT R N +GR+ F P + G ++ L+
Sbjct: 438 GLDIPAVDWIIQFDPPDDTRDYIHRVGRTARGANGRGRSLMFLQPSEVG-----FLKYLK 492
Query: 640 QAGQPVPEF 648
+A PV EF
Sbjct: 493 EARVPVVEF 501
Score = 124 (48.7 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 29/72 (40%), Positives = 51/72 (70%)
Query: 400 KGCNILVATMGRLKDILDR--GRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPD 457
KG N+L+AT GRL D L G + +++ +V+DEADR+L++GF +++ +++ +P+
Sbjct: 249 KGVNLLIATPGRLLDHLQNTPGFV-FKNLKTLVIDEADRILEVGFEDEMRQIIK--ILPN 305
Query: 458 VANRQTLMFSAT 469
+RQT++FSAT
Sbjct: 306 -EDRQTMLFSAT 316
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 416 (151.5 bits), Expect = 8.5e-38, P = 8.5e-38
Identities = 97/236 (41%), Positives = 139/236 (58%)
Query: 173 QTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAG 232
Q +N E + V G P+PI+S+ G+ ++ +LKK Y KPTPIQ AIPA
Sbjct: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 233 LEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHE 292
+ GRDL+G A+TGSGKT AFL+P+ H+++ L G P +I PTREL +QI +
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS-LEEG--EGPIAVIMTPTRELALQITK 463
Query: 293 VACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASV 349
K++ + L++ YGG +L++G I+V T GR+ D+L + GR++ L V
Sbjct: 464 ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV 523
Query: 350 RFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
+VVLDEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL
Sbjct: 524 TYVVLDEADRMFDMGFEPQVMRIVDN-VRPD---RQTVMFSATFPRAMEALARRIL 575
Score = 416 (151.5 bits), Expect = 8.5e-38, P = 8.5e-38
Identities = 104/263 (39%), Positives = 147/263 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDN-VR 551
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + + +GG S +DV Q ++ +
Sbjct: 552 PD---RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK 608
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L S+HG Q R+ I+DFK
Sbjct: 609 LLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNG 668
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F DQ
Sbjct: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ- 727
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D+++ LE +G VP L+
Sbjct: 728 ARYAGDIIKALELSGTAVPPDLE 750
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 413 (150.4 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 98/257 (38%), Positives = 147/257 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
KKG I++AT GRL DIL+ G+ +L V ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 505 KKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ-IRPD- 562
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEV--PXXXXXXXX 509
RQTLMFSAT+P+ +Q ++I + +G + V+ I+EV
Sbjct: 563 --RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERML 620
Query: 510 XXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKM 569
++ VIVF T + D + L + + IHG++ Q +R+ + FK +
Sbjct: 621 SFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMV 680
Query: 570 KVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
+++AT VASRGLDIK I++V+NYD P I+ Y+HRIGRT R G G + S D +
Sbjct: 681 PIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTD-NAR 739
Query: 630 IAKDLVRILEQAGQPVP 646
+A +L+++L +A Q +P
Sbjct: 740 LANELIKVLTEAKQKIP 756
Score = 405 (147.6 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 95/214 (44%), Positives = 128/214 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
++ V G P PI F A L+K + + + PTPIQ A P L+GRD++G A+T
Sbjct: 371 QMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKT 430
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT AFL+P + H+ P V P V++ APTREL +QI E K+ +S +
Sbjct: 431 GSGKTLAFLLPSIVHINAQP---VLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQIS 487
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGAS L+KG I++AT GRL DIL+ G+ +L V ++VLDEADRMLDMG
Sbjct: 488 NTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMG 547
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
F I+ ++ PD RQTLMFSAT+P+ +Q
Sbjct: 548 FEPQIRKIISQ-IRPD---RQTLMFSATWPKEVQ 577
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 97/236 (41%), Positives = 139/236 (58%)
Query: 173 QTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAG 232
Q +N E + V G P+PI+S+ G+ ++ +LKK Y KPTPIQ AIPA
Sbjct: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 233 LEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHE 292
+ GRDL+G A+TGSGKT AFL+P+ H+++ L G P +I PTREL +QI +
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS-LEEG--EGPIAVIMTPTRELALQITK 463
Query: 293 VACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASV 349
K++ + L++ YGG +L++G I+V T GR+ D+L + GR++ L V
Sbjct: 464 ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV 523
Query: 350 RFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
+VVLDEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL
Sbjct: 524 TYVVLDEADRMFDMGFEPQVMRIVDN-VRPD---RQTVMFSATFPRAMEALARRIL 575
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 104/263 (39%), Positives = 147/263 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDN-VR 551
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + + +GG S +DV Q ++ +
Sbjct: 552 PD---RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK 608
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L S+HG Q R+ I+DFK
Sbjct: 609 LLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNG 668
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F DQ
Sbjct: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ- 727
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D+++ LE +G VP L+
Sbjct: 728 ARYAGDIIKALELSGTAVPPDLE 750
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 97/236 (41%), Positives = 139/236 (58%)
Query: 173 QTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAG 232
Q +N E + V G P+PI+S+ G+ ++ +LKK Y KPTPIQ AIPA
Sbjct: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 233 LEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHE 292
+ GRDL+G A+TGSGKT AFL+P+ H+++ L G P +I PTREL +QI +
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS-LEEG--EGPIAVIMTPTRELALQITK 463
Query: 293 VACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASV 349
K++ + L++ YGG +L++G I+V T GR+ D+L + GR++ L V
Sbjct: 464 ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV 523
Query: 350 RFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
+VVLDEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL
Sbjct: 524 TYVVLDEADRMFDMGFEPQVMRIVDN-VRPD---RQTVMFSATFPRAMEALARRIL 575
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 104/263 (39%), Positives = 147/263 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDN-VR 551
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + + +GG S +DV Q ++ +
Sbjct: 552 PD---RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK 608
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L S+HG Q R+ I+DFK
Sbjct: 609 LLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNG 668
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F DQ
Sbjct: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ- 727
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D+++ LE +G VP L+
Sbjct: 728 ARYAGDIIKALELSGTAVPPDLE 750
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 97/236 (41%), Positives = 139/236 (58%)
Query: 173 QTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAG 232
Q +N E + V G P+PI+S+ G+ ++ +LKK Y KPTPIQ AIPA
Sbjct: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 233 LEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHE 292
+ GRDL+G A+TGSGKT AFL+P+ H+++ L G P +I PTREL +QI +
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS-LEEG--EGPIAVIMTPTRELALQITK 463
Query: 293 VACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASV 349
K++ + L++ YGG +L++G I+V T GR+ D+L + GR++ L V
Sbjct: 464 ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV 523
Query: 350 RFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
+VVLDEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL
Sbjct: 524 TYVVLDEADRMFDMGFEPQVMRIVDN-VRPD---RQTVMFSATFPRAMEALARRIL 575
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 104/263 (39%), Positives = 147/263 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDN-VR 551
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + + +GG S +DV Q ++ +
Sbjct: 552 PD---RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK 608
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L S+HG Q R+ I+DFK
Sbjct: 609 LLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNG 668
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F DQ
Sbjct: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ- 727
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D+++ LE +G VP L+
Sbjct: 728 ARYAGDIIKALELSGTAVPPDLE 750
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 97/236 (41%), Positives = 139/236 (58%)
Query: 173 QTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAG 232
Q +N E + V G P+PI+S+ G+ ++ +LKK Y KPTPIQ AIPA
Sbjct: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 233 LEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHE 292
+ GRDL+G A+TGSGKT AFL+P+ H+++ L G P +I PTREL +QI +
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS-LEEG--EGPIAVIMTPTRELALQITK 463
Query: 293 VACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASV 349
K++ + L++ YGG +L++G I+V T GR+ D+L + GR++ L V
Sbjct: 464 ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV 523
Query: 350 RFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
+VVLDEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL
Sbjct: 524 TYVVLDEADRMFDMGFEPQVMRIVDN-VRPD---RQTVMFSATFPRAMEALARRIL 575
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 104/263 (39%), Positives = 147/263 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDN-VR 551
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + + +GG S +DV Q ++ +
Sbjct: 552 PD---RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK 608
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L S+HG Q R+ I+DFK
Sbjct: 609 LLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNG 668
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F DQ
Sbjct: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ- 727
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D+++ LE +G VP L+
Sbjct: 728 ARYAGDIIKALELSGTAVPPDLE 750
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 97/236 (41%), Positives = 139/236 (58%)
Query: 173 QTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAG 232
Q +N E + V G P+PI+S+ G+ ++ +LKK Y KPTPIQ AIPA
Sbjct: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 233 LEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHE 292
+ GRDL+G A+TGSGKT AFL+P+ H+++ L G P +I PTREL +QI +
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS-LEEG--EGPIAVIMTPTRELALQITK 463
Query: 293 VACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASV 349
K++ + L++ YGG +L++G I+V T GR+ D+L + GR++ L V
Sbjct: 464 ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV 523
Query: 350 RFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
+VVLDEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL
Sbjct: 524 TYVVLDEADRMFDMGFEPQVMRIVDN-VRPD---RQTVMFSATFPRAMEALARRIL 575
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 104/263 (39%), Positives = 147/263 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDN-VR 551
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + + +GG S +DV Q ++ +
Sbjct: 552 PD---RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK 608
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L S+HG Q R+ I+DFK
Sbjct: 609 LLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNG 668
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F DQ
Sbjct: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ- 727
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D+++ LE +G VP L+
Sbjct: 728 ARYAGDIIKALELSGTAVPPDLE 750
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 416 (151.5 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 104/263 (39%), Positives = 147/263 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDN-VR 551
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQTILEVPXXXXXXX 508
PD RQT+MFSATFP E + + + + + +GG S +DV Q ++ +
Sbjct: 552 PD---RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK 608
Query: 509 XXXXXXXXDEDG-VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E G VI+FV +AD + L S+HG Q R+ I+DFK
Sbjct: 609 LLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNG 668
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K+LVAT+VA+RGLD+K + V+NY P ++YVHR GRTGR GNKG A +F DQ
Sbjct: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ- 727
Query: 628 GAIAKDLVRILEQAGQPVPEFLK 650
A D+++ LE +G VP L+
Sbjct: 728 ARYAGDIIKALELSGTAVPPDLE 750
Score = 414 (150.8 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 96/233 (41%), Positives = 138/233 (59%)
Query: 176 INFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEG 235
+N E + V G P+PI+S+ G+ ++ +LKK Y KPTPIQ AIPA + G
Sbjct: 350 VNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSG 409
Query: 236 RDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVAC 295
RDL+G A+TGSGKT AFL+P+ H+++ L G P +I PTREL +QI +
Sbjct: 410 RDLIGIAKTGSGKTIAFLLPMFRHIMDQRS-LEEG--EGPIAVIMTPTRELALQITKECK 466
Query: 296 KYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFV 352
K++ + L++ YGG +L++G I+V T GR+ D+L + GR++ L V +V
Sbjct: 467 KFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV 526
Query: 353 VLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
VLDEADRM DMGF + ++ + PD RQT+MFSATFP ++ IL
Sbjct: 527 VLDEADRMFDMGFEPQVMRIVDN-VRPD---RQTVMFSATFPRAMEALARRIL 575
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 244 (91.0 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 72/262 (27%), Positives = 130/262 (49%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
+ +E V N I++F+ L+ L++ + + +P+ IQ+ AI L RD++
Sbjct: 3 DQLEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQ 62
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS 301
AQ+G+GKTA F I ++ + S Q + +I APTREL QI +V A
Sbjct: 63 AQSGTGKTATFSISVLQKIDTS--------LKQCQALILAPTRELAQQIQKVVV--ALGD 112
Query: 302 VLKICLH--YGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
++ + H GG L+ G +++V T GR+ D++ R + +V+ VLDEAD
Sbjct: 113 LMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADE 172
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRG 419
ML GF I + Q +P A Q ++ SAT P+ + + + ++ ++ +
Sbjct: 173 MLSRGFKDQIYDIFQ--LLPPTA--QVVLLSATMPQDVLEVTTKFM---RDPIRILVKKD 225
Query: 420 RISLASVR--FVVLDEADRMLD 439
++L ++ +V +++ + LD
Sbjct: 226 ELTLEGIKQFYVAVEKEEWKLD 247
Score = 225 (84.3 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 40/104 (38%), Positives = 66/104 (63%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F +T R D++ L E + +S+HG Q+QR+ +H+F+T ++L+ T + +RG
Sbjct: 262 VIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARG 321
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
+D++ + VINYDLP + Y+HRIGR GR G KG + +F D
Sbjct: 322 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTND 365
Score = 120 (47.3 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 366 LGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLAS 425
LGD+ +V H+ + R + +Q G +++V T GR+ D++ R + +
Sbjct: 110 LGDLMNVECHACIGGTLVRDDMA-------ALQA-GVHVVVGTPGRVHDMIQRRALPTDA 161
Query: 426 VRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETI 474
V+ VLDEAD ML GF I + Q +P A Q ++ SAT P+ +
Sbjct: 162 VQMFVLDEADEMLSRGFKDQIYDIFQ--LLPPTA--QVVLLSATMPQDV 206
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 95/264 (35%), Positives = 153/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 211 ERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 268
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ +++ +Y+ I VG + A+ +++Q + +E
Sbjct: 269 --RQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKLI 326
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 327 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 386
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 387 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 446
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 447 KQ-ARELIKVLEEANQAINPKLMQ 469
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 91/216 (42%), Positives = 128/216 (59%)
Query: 185 EVKVSG-DNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ + G + P+P+ +F + ++ L N+T+PTPIQ P L GRD++G AQ
Sbjct: 76 EITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQ 135
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 136 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 192
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 193 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 252
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 253 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 284
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 249 (92.7 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 73/262 (27%), Positives = 134/262 (51%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
ENVE+ S D + SFE L+E L++ + Y P+ +Q AI +GRD++
Sbjct: 7 ENVELTTSED--VNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQ 64
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS 301
AQ+G+GKTA F I I+ + +L + +I +PTREL +QI V A
Sbjct: 65 AQSGTGKTATFSIGILQSI-----DLSV---RDTQALILSPTRELAVQIQNVVL--ALGD 114
Query: 302 VLKICLH--YGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADR 359
+ + H GG S + ++L+ G +++ T GR+ D++ R + +V+ ++LDEAD
Sbjct: 115 HMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADE 174
Query: 360 MLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRG 419
+L+ GF I + ++ +P Q ++ SAT P+ + + T ++ ++ R
Sbjct: 175 LLNQGFKEQIYDIYRY--LPP--GTQVVVVSATLPQDVLEMTNKF---TTNPVRILVKRD 227
Query: 420 RISLASVR--FVVLDEADRMLD 439
++L ++ F+ +++ + D
Sbjct: 228 ELTLEGLKQYFIAVEKEEWKFD 249
Score = 218 (81.8 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 41/113 (36%), Positives = 69/113 (61%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F ++ R D++ + E TS+HG Q +R+ + DF+ +VL+ T + +RG
Sbjct: 264 VIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARG 323
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDL 634
+D++ + VINYDLP + Y+HRIGR+GR G KG A +F ++D I +D+
Sbjct: 324 IDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVT-NEDVRILRDI 375
Score = 102 (41.0 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 401 GCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVAN 460
G +++ T GR+ D++ R + +V+ ++LDEAD +L+ GF I + ++ +P
Sbjct: 139 GQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRY--LPP--G 194
Query: 461 RQTLMFSATFPETI 474
Q ++ SAT P+ +
Sbjct: 195 TQVVVVSATLPQDV 208
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 98/249 (39%), Positives = 142/249 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K+G +I+VAT GRL + L +SL+SV F+VLDEADRMLDMGF DIQ ++Q
Sbjct: 122 KRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNK--- 178
Query: 459 ANRQTLMFSATFPETIQK--NYIFIAVGIIGG----ASTDVV-QTILEVPXXXXXXXXXX 511
RQ L+FSATF ++K N + I +I + D V Q + V
Sbjct: 179 -KRQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSE 237
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ V+VF +T AD + L I + +HG + Q R +A+ +F + K++V
Sbjct: 238 LIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRV 297
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT VA+RGLDI + +V+N+DLP ++YVHRIGRTGR G G A SF +++ +A
Sbjct: 298 LVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLA 357
Query: 632 KDLVRILEQ 640
D+ +++ Q
Sbjct: 358 -DIEKLIGQ 365
Score = 370 (135.3 bits), Expect = 6.7e-34, P = 6.7e-34
Identities = 89/210 (42%), Positives = 125/210 (59%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
FES +++ + Y K TPIQ+ AIPA G+D++ AQTG+GKTAAF +PI+
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHE---VACKYAYSSVLKICLHYGGASSMH 316
++E+P E + + V+I PTREL Q+ E KY SVL I YGG
Sbjct: 63 MVENPSETLK---SNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTI---YGGVKVET 116
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
++L++G +I+VAT GRL + L +SL+SV F+VLDEADRMLDMGF DIQ ++Q
Sbjct: 117 QAQKLKRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAV 176
Query: 377 TMPDVANRQTLMFSATFPETIQKKGCNILV 406
RQ L+FSATF ++K +++
Sbjct: 177 NK----KRQNLLFSATFSSAVKKLANEMMI 202
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 408 (148.7 bits), Expect = 5.0e-37, P = 5.0e-37
Identities = 108/298 (36%), Positives = 167/298 (56%)
Query: 369 IQHVMQ---HSTMPDVANRQTLMF--SATFPETIQ-KKGCNILVATMGRLKDILDRGRIS 422
IQ V++ H P++ R T +F S+ P+ +G +++AT GRL D L+ +
Sbjct: 326 IQSVVRDYGHLCKPEI--RHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTN 383
Query: 423 LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ------- 475
L ++VLDEADRMLDMGF I+ +++ PD RQ +M+SAT+P+ +Q
Sbjct: 384 LQRCTYLVLDEADRMLDMGFEPQIRKIIEQ-IRPD---RQVVMWSATWPKEVQALAGDFL 439
Query: 476 KNYIFIAVGIIGGASTDVVQTILEV------PXXXXXXXXXXX-XXXXDEDG--VIVFVS 526
+YI I +G + ++ ++ I+E+ P +G +IVFV
Sbjct: 440 NDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVE 499
Query: 527 T-IRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIK 585
T I+ D + E AT SIHG + Q++R+ + DF+ K +L+AT VASRGLD++
Sbjct: 500 TKIKVEDILQIIRAEGYNAT-SIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVE 558
Query: 586 GIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQAGQ 643
+++VINYD P + YVHRIGRTGR G A +F+ PD + A++L+ +LE+AGQ
Sbjct: 559 DLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPD-NAKQARELISVLEEAGQ 615
Score = 404 (147.3 bits), Expect = 4.1e-36, P = 4.1e-36
Identities = 87/218 (39%), Positives = 132/218 (60%)
Query: 184 VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
+E+ VSG+ P P+ SFE + L +++ +K+ +TKPT IQ P L GRDL+G AQ
Sbjct: 223 LEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQ 282
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAY---S 300
TGSGKT A+++P + H+ P ++ G P ++ APTREL QI V Y +
Sbjct: 283 TGSGKTLAYMLPAIVHIGNQP-PIIRG--EGPIALVLAPTRELAQQIQSVVRDYGHLCKP 339
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
+ C+ +GG+S + R L++G +++AT GRL D L+ +L ++VLDEADRM
Sbjct: 340 EIRHTCI-FGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRM 398
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
LDMGF I+ +++ PD RQ +M+SAT+P+ +Q
Sbjct: 399 LDMGFEPQIRKIIEQ-IRPD---RQVVMWSATWPKEVQ 432
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 409 (149.0 bits), Expect = 6.2e-37, P = 6.2e-37
Identities = 102/265 (38%), Positives = 146/265 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L V +VVLDEADRM DMGF + ++ +
Sbjct: 662 KRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSN-VR 720
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGII-GGAS------TDVVQTILEVPXXXX 505
PD RQT++FSATFP E + + + + I+ GG S T +V+ E
Sbjct: 721 PD---RQTVLFSATFPRNMEALARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVR 777
Query: 506 XXXXXXXXXXXDEDG---VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIH 562
DE+ ++FV AD + L SIHG + Q R+ I
Sbjct: 778 LLELLGNLYSTDENEDARSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIE 837
Query: 563 DFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFY 622
DFK VL+AT+VA+RGLD+K ++ V+NYD P +++YVHR GRTGR GN G A +F
Sbjct: 838 DFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFL 897
Query: 623 DPDQDGAIAKDLVRILEQAGQPVPE 647
DQ+ + D+ + L+Q+GQ VPE
Sbjct: 898 TEDQE-RYSVDIAKALKQSGQEVPE 921
Score = 362 (132.5 bits), Expect = 3.9e-30, P = 3.9e-30
Identities = 89/218 (40%), Positives = 129/218 (59%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+KV G + P+P++ + GL + + K + T IQ AIPA + GRD++G A+TG
Sbjct: 529 IKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTG 588
Query: 246 SGKTAAFLIPIMHHLLES-PGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSV-L 303
SGKT AFLIP+ H+ + P E + G P +I PTREL QIH+ CK ++ L
Sbjct: 589 SGKTMAFLIPMFRHIKDQRPLENMEG----PIGLIMTPTRELATQIHK-DCKPFLKALNL 643
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRM 360
+ YGGA +L++G I+V T GR+ D+L + GR++ L V +VVLDEADRM
Sbjct: 644 RAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRM 703
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQ 398
DMGF + ++ + PD RQT++FSATFP ++
Sbjct: 704 FDMGFEPQVMKILSN-VRPD---RQTVLFSATFPRNME 737
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 91/201 (45%), Positives = 124/201 (61%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
+F GL E ++K + +S YT PTPIQ+ AIP L G D+ G AQTG+GKTAAF++P++
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQ 64
Query: 259 HLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFN 318
L S G P +I PTREL Q+ E KY L + L GG S
Sbjct: 65 RL--STGR---ARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQE 119
Query: 319 RQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 378
L++G ++L+AT GRL D DRG++ + V +++DEADRMLDMGF+ DI+ + + +
Sbjct: 120 TLLQRGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKIC--AKL 177
Query: 379 PDVANRQTLMFSATFPETIQK 399
P ANRQTL+FSATFP IQ+
Sbjct: 178 P--ANRQTLLFSATFPTDIQR 196
Score = 390 (142.3 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 96/265 (36%), Positives = 145/265 (54%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
ET+ ++G ++L+AT GRL D DRG++ + V +++DEADRMLDMGF+ DI+ + +
Sbjct: 119 ETLLQRGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKIC--AK 176
Query: 455 MPDVANRQTLMFSATFP-------ETIQKNYIFIAVGIIGGASTDVVQTILEVPXXXXXX 507
+P ANRQTL+FSATFP +T QK+ I V + + Q ++++P
Sbjct: 177 LP--ANRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKA 234
Query: 508 XXXXXXXXXDEDGV---IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDF 564
+ V IVF + D +A L + IHG QS R + + F
Sbjct: 235 RRTALRRVIEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRF 294
Query: 565 KTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDP 624
+ K+K+LVA+ VA+RGLDI + HV N+ P + ++YVHRIGRTGR G G + + P
Sbjct: 295 RDGKLKLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTP 354
Query: 625 DQDGAIAKDLVRILEQAGQPVPEFL 649
D K +++ + VPEF+
Sbjct: 355 ADD----KSWGFVVKMIKKDVPEFM 375
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 95/264 (35%), Positives = 149/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 136 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 193
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 194 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 251
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 252 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 311
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 312 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 371
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 372 KQVS-DLISVLREANQAINPKLLQ 394
Score = 248 (92.4 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 56/125 (44%), Positives = 78/125 (62%)
Query: 275 PEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGR 334
P ++ APTREL Q+ +VA +Y + LK YGGA R LE+G I +AT GR
Sbjct: 89 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 148
Query: 335 LKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFP 394
L D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD RQTLM+SAT+P
Sbjct: 149 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD---RQTLMWSATWP 204
Query: 395 ETIQK 399
+ +++
Sbjct: 205 KEVRQ 209
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 87/236 (36%), Positives = 131/236 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K+ +I+V T GR+ D +++G +SL ++++V+DEAD ML+MGF+ ++ ++ +P
Sbjct: 120 KQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDE--LP-- 175
Query: 459 ANRQTLMFSATFPETIQK---NYIFIAVGI---IGGASTDVVQ-TILEVPXXXXXXXXXX 511
R T++FSAT PE +++ Y+ I G +TD ++ T+ EV
Sbjct: 176 TKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKD 235
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ D I+F T N D + L IHG +Q R + DF+ K +
Sbjct: 236 VTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRY 295
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
LVAT VA+RG+DI I HVINYD+P E + YVHR GRTGR GN G+A +F P +D
Sbjct: 296 LVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYED 351
Score = 285 (105.4 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 66/202 (32%), Positives = 114/202 (56%)
Query: 198 ESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIM 257
+SF + L + + + L Y PT +Q IP L+ +DL+ +QTGSGKTA+F IP+
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 258 HHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHF 317
E+V +P+ ++ PTREL +Q+ E +K YG +
Sbjct: 64 --------EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQ 115
Query: 318 NRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
+L++ +I+V T GR+ D +++G +SL ++++V+DEAD ML+MGF+ ++ ++
Sbjct: 116 KLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDE-- 173
Query: 378 MPDVANRQTLMFSATFPETIQK 399
+P R T++FSAT PE +++
Sbjct: 174 LP--TKRMTMLFSATLPEDVER 193
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 87/236 (36%), Positives = 131/236 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K+ +I+V T GR+ D +++G +SL ++++V+DEAD ML+MGF+ ++ ++ +P
Sbjct: 120 KQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDE--LP-- 175
Query: 459 ANRQTLMFSATFPETIQK---NYIFIAVGI---IGGASTDVVQ-TILEVPXXXXXXXXXX 511
R T++FSAT PE +++ Y+ I G +TD ++ T+ EV
Sbjct: 176 TKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKD 235
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ D I+F T N D + L IHG +Q R + DF+ K +
Sbjct: 236 VTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRY 295
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
LVAT VA+RG+DI I HVINYD+P E + YVHR GRTGR GN G+A +F P +D
Sbjct: 296 LVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYED 351
Score = 285 (105.4 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 66/202 (32%), Positives = 114/202 (56%)
Query: 198 ESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIM 257
+SF + L + + + L Y PT +Q IP L+ +DL+ +QTGSGKTA+F IP+
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 258 HHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHF 317
E+V +P+ ++ PTREL +Q+ E +K YG +
Sbjct: 64 --------EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQ 115
Query: 318 NRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
+L++ +I+V T GR+ D +++G +SL ++++V+DEAD ML+MGF+ ++ ++
Sbjct: 116 KLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDE-- 173
Query: 378 MPDVANRQTLMFSATFPETIQK 399
+P R T++FSAT PE +++
Sbjct: 174 LP--TKRMTMLFSATLPEDVER 193
>SGD|S000002651 [details] [associations]
symbol:PRP28 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
complex" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
"U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
Uniprot:P23394
Length = 588
Score = 402 (146.6 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 89/252 (35%), Positives = 151/252 (59%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM-PDV 458
+GC+ILVAT GRL D L+ + + V +VLDEAD+M+D+GF + +++ + D
Sbjct: 309 EGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADS 368
Query: 459 A-NRQTLMFSATFPETIQK---NY----IFIAVGIIGGASTDVVQTILEVPXXXXXXXXX 510
A NRQTLMF+AT I+K Y ++ +G+ G S ++Q ++E
Sbjct: 369 AVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETG-SEPLIQQVVEYADNDEDKFKK 427
Query: 511 XXXXXXDEDG-VIVFVSTIRNADFIA-CYLCETEIATTSIHGSRLQSQREQAIHDFKTKK 568
D +I+F++ + AD++A + ET + T +HGS+ Q QRE ++ F+T K
Sbjct: 428 LKPIVAKYDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNK 487
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG 628
+++++AT VA+RGLDI + V+N+ + +++D+Y+HRIGRTGR N+G A SF +D
Sbjct: 488 VQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDE 547
Query: 629 AIAKDLVRILEQ 640
++ ++L + + +
Sbjct: 548 SLIRELYKYVRK 559
Score = 313 (115.2 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 84/232 (36%), Positives = 126/232 (54%)
Query: 182 ENVEVKVSGDNPPRPIESFESAGL--REILVKNLKKSNYTKPTPIQKYAIP--AGLEG-R 236
E+ + G P+ ++E + R++L +++ + PTPIQ+ IP ++ R
Sbjct: 156 EDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYR 215
Query: 237 DLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQ-PEVIICAPTRELVMQIHEVAC 295
D +G A TGSGKT AF+IPI+ + SP + P+ +I APTRELV QI +
Sbjct: 216 DFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQ 275
Query: 296 KYA--YSSV----LKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASV 349
K +S K+ GG S + L +GC+ILVAT GRL D L+ + + V
Sbjct: 276 KVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQV 335
Query: 350 RFVVLDEADRMLDMGFLGDIQHVMQHSTM-PDVA-NRQTLMFSATFPETIQK 399
+VLDEAD+M+D+GF + +++ + D A NRQTLMF+AT I+K
Sbjct: 336 ETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEK 387
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 400 (145.9 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 95/264 (35%), Positives = 152/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 294 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 351
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ ++Y I VG + A+ +++Q + +E
Sbjct: 352 --RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLI 409
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 410 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 469
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 470 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 529
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 530 KQ-ARELIKVLEEANQAINPKLMQ 552
Score = 400 (145.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 93/216 (43%), Positives = 129/216 (59%)
Query: 185 EVKV-SGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ V GD P+P+ +F A + ++ L ++T+PTPIQ P L GRD++G AQ
Sbjct: 159 EITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQ 218
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 219 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 275
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 276 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDM 335
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 336 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 367
Score = 40 (19.1 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 250 AAFLIPIMHHLLESP 264
AAF+ PI+ LL SP
Sbjct: 5 AAFITPILCVLLPSP 19
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 402 (146.6 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 93/223 (41%), Positives = 137/223 (61%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+ V G + P+PI+++ G+ ++ LKK Y+KPT IQ AIP+ + GRD++G A+TG
Sbjct: 292 ITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTG 351
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKI 305
SGKT AFL+P+ H+L+ P EL G P +I APTREL MQ ++ A K+A LK+
Sbjct: 352 SGKTLAFLLPMFRHILDQP-ELEEG--DGPIAVILAPTRELAMQTYKEANKFAKPLGLKV 408
Query: 306 CLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLD 362
YGG L++G I+V T GR+ D+L + G+++ L V ++VLDEADRM D
Sbjct: 409 ACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFD 468
Query: 363 MGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
GF I V+ ++ PD +QT++FSATFP ++ +L
Sbjct: 469 KGFEPQIMKVV-NNIRPD---KQTVLFSATFPRHMEALARKVL 507
Score = 396 (144.5 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 103/264 (39%), Positives = 147/264 (55%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + G+++ L V ++VLDEADRM D GF I V+ ++
Sbjct: 425 KRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVV-NNIR 483
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAS---TDVVQT-ILEVPXXXXXX 507
PD +QT++FSATFP E + + + V I +GG S +D+ Q ++
Sbjct: 484 PD---KQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCSDITQNAVICAEHQKFLK 540
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTS-IHGSRLQSQREQAIHDFKT 566
+E IVFV AD I L T + + +HG Q R+ +I DFKT
Sbjct: 541 LLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKT 600
Query: 567 KKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
+KVLVAT+VA+RGLD+K + V+NYD P ++YVHR+GRTGR G KG A +F P+
Sbjct: 601 GVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEH 660
Query: 627 DGAIAKDLVRILEQAGQPVPEFLK 650
+A ++ R E AG P LK
Sbjct: 661 QEKMAGEICRAFETAGCKPPADLK 684
Score = 55 (24.4 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKS-NYT 219
D+ E ++ + GI E VE K+ D+ P+++F ++EI KN KK+ N T
Sbjct: 144 DEDEFDIKNEGISEENPVKMEEKVE-KMDTDDEEDPLDAF----MKEIATKNAKKTGNST 198
Query: 220 K 220
+
Sbjct: 199 Q 199
>CGD|CAL0005900 [details] [associations]
symbol:MAK5 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0005900 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14805
RefSeq:XP_714899.1 RefSeq:XP_714962.1 ProteinModelPortal:Q59ZH9
STRING:Q59ZH9 GeneID:3643358 GeneID:3643454 KEGG:cal:CaO19.11024
KEGG:cal:CaO19.3540 Uniprot:Q59ZH9
Length = 782
Score = 266 (98.7 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 84/259 (32%), Positives = 128/259 (49%)
Query: 161 DQSEDNLFSSGIQTGINFSGWENVEVKVSGDNP---PRPIESFESAGLREILVKNLKKSN 217
+ +D L S + +N + N+++ + DN P E + + + L + +
Sbjct: 159 NDKDDKLAESNDE--LNAVSFANLDLPLPDDNEINLPNWQEGDLGSSISAYTLYGLSQLD 216
Query: 218 YTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGY----CA 273
+ KPTPIQK IP L G+D++G A TGSGKT A+ IPI+ ++S +
Sbjct: 217 FKKPTPIQKETIPIALSGKDVIGKATTGSGKTLAYGIPILEKYIQSLNLIKQNNKDKKIN 276
Query: 274 QPEVIICAPTRELVMQI--H-EVACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVA 330
P II APTREL Q+ H KY+ S I GG S R L G I+VA
Sbjct: 277 HPTGIIFAPTRELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVA 336
Query: 331 TMGRLKDILDR-GRIS--LASVRFVVLDEADRMLDMGFLGDIQHVMQ--HSTMPDVANR- 384
T GR+ +++ ++ LAS+ +VLDEADR+L G + + +++ P +
Sbjct: 337 TPGRMLELVQGDSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILELFGKNRPKSKSIE 396
Query: 385 ---QTLMFSATFPETIQKK 400
QTL+FSATF + +K
Sbjct: 397 WKWQTLVFSATFSRDLFRK 415
Score = 206 (77.6 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 47/121 (38%), Positives = 67/121 (55%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK----VLVATAV 577
+VF ++I + + L I SIH S +Q QR +A+ FK K VLVA+ V
Sbjct: 491 LVFANSIDSVKRLVPLLNNLNIPAFSIHSSMIQKQRLRALEKFKEASQKNEVAVLVASDV 550
Query: 578 ASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRI 637
A+RGLDI I HV++Y LP+ D Y+HR GRT R G +G + F P + + L R+
Sbjct: 551 AARGLDIPNIDHVVHYHLPRSADVYIHRSGRTARAGKEGVSAMFCSPQEASGPLRKLRRL 610
Query: 638 L 638
+
Sbjct: 611 V 611
Score = 98 (39.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 395 ETIQKKGCNILVATMGRLKDILDR-GRIS--LASVRFVVLDEADRMLDMGFLGDIQHVMQ 451
+ + + G I+VAT GR+ +++ ++ LAS+ +VLDEADR+L G + + +++
Sbjct: 324 QRLLRHGPGIIVATPGRMLELVQGDSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILE 383
Query: 452 --HSTMPDVANR----QTLMFSATF 470
P + QTL+FSATF
Sbjct: 384 LFGKNRPKSKSIEWKWQTLVFSATF 408
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 99/269 (36%), Positives = 148/269 (55%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ IQ K ++VAT GRL D+L G + L+ V ++VLDEADRML+ GF DI+++++ +
Sbjct: 225 QRIQLKKSQVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRET- 283
Query: 455 MPDVANRQTLMFSATFPE-------TIQKNYIFIAVGIIGGASTDV-VQTILEVPXXXXX 506
D + RQTLMF+AT+P+ T N I +++G + + + I+EV
Sbjct: 284 --DASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGK 341
Query: 507 XXXXXXXXXXDEDG------VIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQA 560
G V++F + A + L +IHG Q QR QA
Sbjct: 342 ERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQA 401
Query: 561 IHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATS 620
+++FK+ K +L+AT VA+RGLDI ++ VIN P +++YVHRIGRTGR G G A +
Sbjct: 402 LNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHT 461
Query: 621 FYDPDQDGAIAKDLVRILEQAGQPVPEFL 649
+ +Q+ +A LV +L A QPVPE L
Sbjct: 462 LFT-EQEKHLAGGLVNVLNGANQPVPEDL 489
Score = 352 (129.0 bits), Expect = 3.6e-30, P = 3.6e-30
Identities = 85/219 (38%), Positives = 130/219 (59%)
Query: 182 EN-VEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMG 240
EN + V+ S D RP+ SF+ L + + K + KPTPIQ A P L G+D++G
Sbjct: 97 ENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FPKPTPIQAVAWPYLLSGKDVVG 154
Query: 241 CAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS 300
A+TGSGKT AF +P + HL+ + G +V++ +PTREL QI++
Sbjct: 155 VAETGSGKTFAFGVPAISHLMNDQKK--RGI----QVLVISPTRELASQIYDNLIVLTDK 208
Query: 301 SVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRM 360
++ C YGG QL+K ++VAT GRL D+L G + L+ V ++VLDEADRM
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRM 267
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
L+ GF DI+++++ + D + RQTLMF+AT+P+ +++
Sbjct: 268 LEKGFEEDIKNIIRET---DASKRQTLMFTATWPKEVRE 303
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 403 (146.9 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 97/264 (36%), Positives = 152/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 216 ERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 273
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ +++ +Y+ I +G + A+ +++Q + +E
Sbjct: 274 --RQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLI 331
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T + D + + IHG + Q +R+ + +F++
Sbjct: 332 QLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSG 391
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 392 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 451
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A+DLVR+LE+A Q + P+ L+
Sbjct: 452 RQ-ARDLVRVLEEARQAINPKLLQ 474
Score = 402 (146.6 bits), Expect = 4.2e-36, P = 4.2e-36
Identities = 91/215 (42%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G P+P+ +F A + ++ L + N+ +PT IQ P L GRD++G AQT
Sbjct: 82 EITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQT 141
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y SS +K
Sbjct: 142 GSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVAFDYGKSSRIK 198
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 199 STCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMG 258
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 259 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 289
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 93/248 (37%), Positives = 147/248 (59%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +ILVAT GRL D++++G ++L+ V F VLDEADRMLDMGFL DI+ +++ +P+
Sbjct: 134 RRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK--LLPE- 190
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+RQ L+FSATF + I++ + I V A+ + + V
Sbjct: 191 -SRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRELLSF 249
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ V+VF T A+ ++ L +++ +IHG++ Q+ R +A+ FK K++V
Sbjct: 250 MIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRV 309
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT VA+RGLDI + HVIN++LP +YVHR+GRTGR N G A S D+ +
Sbjct: 310 LVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEV-RLL 368
Query: 632 KDLVRILE 639
+D+ ++L+
Sbjct: 369 RDIEKLLQ 376
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/203 (43%), Positives = 129/203 (63%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SFE GL L++ +++ Y +PTP+Q+ AIP L+ RD+M AQTG+GKTA F +P++
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 259 HLLESPGELVTGYCAQPEV--IICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMH 316
L S L A+P + +I PTREL +Q+ E Y LK + +GG S
Sbjct: 71 RLFVSRPPLQRS--AKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKP 128
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
L +G +ILVAT GRL D++++G ++L+ V F VLDEADRMLDMGFL DI+ +++
Sbjct: 129 QINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK-- 186
Query: 377 TMPDVANRQTLMFSATFPETIQK 399
+P+ +RQ L+FSATF + I++
Sbjct: 187 LLPE--SRQNLLFSATFSKEIKE 207
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 93/248 (37%), Positives = 147/248 (59%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +ILVAT GRL D++++G ++L+ V F VLDEADRMLDMGFL DI+ +++ +P+
Sbjct: 134 RRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK--LLPE- 190
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+RQ L+FSATF + I++ + I V A+ + + V
Sbjct: 191 -SRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRELLSF 249
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ V+VF T A+ ++ L +++ +IHG++ Q+ R +A+ FK K++V
Sbjct: 250 MIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRV 309
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT VA+RGLDI + HVIN++LP +YVHR+GRTGR N G A S D+ +
Sbjct: 310 LVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEV-RLL 368
Query: 632 KDLVRILE 639
+D+ ++L+
Sbjct: 369 RDIEKLLQ 376
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/203 (43%), Positives = 129/203 (63%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SFE GL L++ +++ Y +PTP+Q+ AIP L+ RD+M AQTG+GKTA F +P++
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 259 HLLESPGELVTGYCAQPEV--IICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMH 316
L S L A+P + +I PTREL +Q+ E Y LK + +GG S
Sbjct: 71 RLFVSRPPLQRS--AKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKP 128
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
L +G +ILVAT GRL D++++G ++L+ V F VLDEADRMLDMGFL DI+ +++
Sbjct: 129 QINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK-- 186
Query: 377 TMPDVANRQTLMFSATFPETIQK 399
+P+ +RQ L+FSATF + I++
Sbjct: 187 LLPE--SRQNLLFSATFSKEIKE 207
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 402 (146.6 bits), Expect = 2.9e-36, P = 2.9e-36
Identities = 93/259 (35%), Positives = 148/259 (57%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +I++AT GRL D+ ++L S+ ++V+DEAD+MLDM F I+ ++ PD
Sbjct: 344 KGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILL-DVRPD-- 400
Query: 460 NRQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQT--ILEVPXXXXXXXXX 510
RQT+M SAT+P+T+++ +Y+ + VG + + + V+ I+
Sbjct: 401 -RQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQE 459
Query: 511 XXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMK 570
D VI+FVS AD ++ I+ S+HG+ QS +E+A+ DFK+ +K
Sbjct: 460 FVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIK 519
Query: 571 VLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
+L+ T + SRGLD+ + HV NYD P+ ID YVHR+G GR G G + + +D +
Sbjct: 520 ILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLIT-QRDSKM 578
Query: 631 AKDLVRILEQAGQPVPEFL 649
A +L++IL++A Q VPE L
Sbjct: 579 AGELIKILDRANQSVPEDL 597
Score = 335 (123.0 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 84/237 (35%), Positives = 133/237 (56%)
Query: 194 PRPIESFESAGLR-EILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAF 252
P+P F+ A + L+K++ + KPTPIQ A P L+G DL+ AQTG+GKT ++
Sbjct: 217 PKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSY 276
Query: 253 LIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGA 312
L+P HL P + P +++ PTREL + + KY+Y + IC+ YGG
Sbjct: 277 LMPGFIHLDSQP--ISREQRNGPGMLVLTPTRELALHVEAECSKYSYKGLKSICI-YGGR 333
Query: 313 SSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHV 372
+ + KG +I++AT GRL D+ ++L S+ ++V+DEAD+MLDM F I+ +
Sbjct: 334 NRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKI 393
Query: 373 MQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGRLKDILDRGRISLASVRFV 429
+ PD RQT+M SAT+P+T+++ + L M I+ G ++L +V V
Sbjct: 394 LL-DVRPD---RQTVMTSATWPDTVRQLALSYLKDPM-----IVYVGNLNLVAVNTV 441
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 393 (143.4 bits), Expect = 3.6e-36, P = 3.6e-36
Identities = 101/266 (37%), Positives = 151/266 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ G +I++ T GRL+D+++ + L+ V FVVLDEADRMLDMGF ++ ++ ++
Sbjct: 239 RSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKV-- 296
Query: 459 ANRQTLMFSATFPETIQK--------NYIFIAVGIIG-GASTDVVQTILEV----PXXXX 505
RQ +MFSAT+P + K N I + +G + A+ DV+Q I+EV
Sbjct: 297 --RQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQ-IIEVLDERARDQR 353
Query: 506 XXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFK 565
++ V+VF A+ + +L + SIHG++ QS+R +++ FK
Sbjct: 354 LIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFK 413
Query: 566 TKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
+LVAT VA+RGLDI + VINY P ++YVHRIGRTGR G KG A +F+ P
Sbjct: 414 EGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPL 473
Query: 626 QDGAIAKDLVRILEQAGQPVP-EFLK 650
G +A +LV +L +AGQ VP + LK
Sbjct: 474 NKG-LAGELVNVLREAGQVVPADLLK 498
Score = 335 (123.0 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 80/205 (39%), Positives = 124/205 (60%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F + L E ++ K + KP+PIQ + P L+GRDL+G A+TGSGKT AF IP
Sbjct: 115 LKTFAESNLPENVLDCCK--TFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172
Query: 257 MHHLLESPGELVTGYC-AQPEVIICAPTRELVMQIHEVACKYAYSSVLK-ICLHYGGASS 314
+ H+L+ ++ G P ++ +PTREL +QI +V + LK IC+ YGG+S
Sbjct: 173 IMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICV-YGGSSK 231
Query: 315 MHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQ 374
+ G +I++ T GRL+D+++ + L+ V FVVLDEADRMLDMGF ++ ++
Sbjct: 232 GPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILS 291
Query: 375 HSTMPDVANRQTLMFSATFPETIQK 399
++ RQ +MFSAT+P + K
Sbjct: 292 NTNKV----RQMVMFSATWPLDVHK 312
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 400 (145.9 bits), Expect = 3.8e-36, P = 3.8e-36
Identities = 91/215 (42%), Positives = 131/215 (60%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
EV V G N P+PI +F A +++ +++ N+T+PT IQ P L G D++G AQT
Sbjct: 69 EVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQT 128
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y+ + LK
Sbjct: 129 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYSRACRLK 185
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 186 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG 245
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 246 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 276
Score = 395 (144.1 bits), Expect = 2.7e-35, P = 2.7e-35
Identities = 94/264 (35%), Positives = 147/264 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 203 ERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 260
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K Y+ I +G + A+ +++Q + +V
Sbjct: 261 --RQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLI 318
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 319 RLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 378
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 379 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 438
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
+ DL+ +L +A Q + P+ L+
Sbjct: 439 KQV-NDLISVLREANQAINPKLLQ 461
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 401 (146.2 bits), Expect = 3.9e-36, P = 3.9e-36
Identities = 93/248 (37%), Positives = 143/248 (57%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G ++LVA GRL D+ +G + L+ V +VLDEADRMLDMGF+ D++ V+ + +P A
Sbjct: 128 RGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVL--ARLP--A 183
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQ L+FSATF + I N I V + Q + +P
Sbjct: 184 KRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALLAHL 243
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
+ V+VF T A+ +A YL + ++ +IHG++ Q+ R +A+ DFK ++++L
Sbjct: 244 ITAGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEVRIL 303
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAK 632
VAT +A+RGLDI + HV+N++LP ++YVHRIGRTGR G G A S PD++ + K
Sbjct: 304 VATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEE-KLLK 362
Query: 633 DLVRILEQ 640
+ R+ +Q
Sbjct: 363 SIERMTKQ 370
Score = 391 (142.7 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 88/202 (43%), Positives = 125/202 (61%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF S GL E LV ++ + YT+PTP+Q+ AIPA L+GRDLM AQTG+GKT F +PI+
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 259 HLLES--PGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS-SVLKICLHYGGASSM 315
L + P + QP V++ PTREL Q+H+ YA + C+ +GG
Sbjct: 62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACI-FGGVGMN 120
Query: 316 HFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQH 375
+ + +G ++LVA GRL D+ +G + L+ V +VLDEADRMLDMGF+ D++ V+
Sbjct: 121 PQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVL-- 178
Query: 376 STMPDVANRQTLMFSATFPETI 397
+ +P A RQ L+FSATF + I
Sbjct: 179 ARLP--AKRQNLLFSATFSKDI 198
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 308 (113.5 bits), Expect = 4.0e-36, Sum P(2) = 4.0e-36
Identities = 79/203 (38%), Positives = 111/203 (54%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
I+ F L + K L +S + PT +Q+ +I L+G+D++G A TGSGKT AFLIP+
Sbjct: 71 IKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPV 130
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMH 316
+ HL + G A II +PTREL QI E K L GG ++
Sbjct: 131 LEHLFMNKWSRTDGVGA----IIISPTRELAYQIFETLKKVGKHHDFSAGLIIGG-KNLK 185
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQH 375
F R CNIL+ T GRL +D + + +++ +VLDEADR LDMGF + ++++
Sbjct: 186 FERTRMDQCNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIEN 245
Query: 376 STMPDVANRQTLMFSATFPETIQ 398
P V RQTL+FSAT T+Q
Sbjct: 246 --FPPV--RQTLLFSATQTNTVQ 264
Score = 158 (60.7 bits), Expect = 4.0e-36, Sum P(2) = 4.0e-36
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 521 VIVFVSTIRNADFIACYLCETEIATT--SIHGSRLQSQREQAIHDFKTKKMKVLVATAVA 578
+IVFV++ + A ++ C+ + +++G+ Q +R DF K V+ +T VA
Sbjct: 335 IIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVA 394
Query: 579 SRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
SRGLD + V+ D P+++ +Y+HR GR+ R +G P ++
Sbjct: 395 SRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEE 443
Score = 142 (55.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 402 CNILVATMGRLKDILDRGRI-SLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVAN 460
CNIL+ T GRL +D + + +++ +VLDEADR LDMGF + ++++ P V
Sbjct: 194 CNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIEN--FPPV-- 249
Query: 461 RQTLMFSATFPETIQ 475
RQTL+FSAT T+Q
Sbjct: 250 RQTLLFSATQTNTVQ 264
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 400 (145.9 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 91/215 (42%), Positives = 131/215 (60%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
EV V G N P+PI +F A +++ +++ N+T+PT IQ P L G D++G AQT
Sbjct: 77 EVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQT 136
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y+ + LK
Sbjct: 137 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYSRACRLK 193
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 194 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG 253
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 254 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 284
Score = 395 (144.1 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 94/264 (35%), Positives = 147/264 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 211 ERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 268
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K Y+ I +G + A+ +++Q + +V
Sbjct: 269 --RQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLI 326
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 327 RLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 386
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 387 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 446
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
+ DL+ +L +A Q + P+ L+
Sbjct: 447 KQV-NDLISVLREANQAINPKLLQ 469
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 97/255 (38%), Positives = 147/255 (57%)
Query: 394 PETIQKKG-CNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQH 452
P+ ++ +G ++LVAT GRL D+ + + L V +VLDEADRMLDMGF+ DI+ V+
Sbjct: 117 PQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL-- 174
Query: 453 STMPDVANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXX 505
+ +P A RQ L+FSATF + I+ N + I V AS V Q + V
Sbjct: 175 TKLP--AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRK 232
Query: 506 XXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFK 565
+ V+VF T A+ +A L + I + +IHG++ Q R +A+ DFK
Sbjct: 233 RELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292
Query: 566 TKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
+ ++VLVAT +A+RGLDI+ + HV+NY+LP ++YVHRIGRTGR G A S D
Sbjct: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352
Query: 626 QDGAIAKDLVRILEQ 640
+ + +D+ ++L++
Sbjct: 353 EH-KLLRDIEKLLKK 366
Score = 375 (137.1 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 89/202 (44%), Positives = 125/202 (61%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF+S GL +++ + + Y +PTPIQ+ AIPA LEGRDLM AQTG+GKTA F +P++
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 259 HLLESPGELVTGYCAQP-EVIICAPTRELVMQIHEVACKYA-YSSVLKICLHYGGASSMH 316
HL+ G +P +I PTREL QI E Y+ Y ++ + + +GG S
Sbjct: 62 HLITRQPH-AKG--RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVV-FGGVSINP 117
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
+L G ++LVAT GRL D+ + + L V +VLDEADRMLDMGF+ DI+ V+ +
Sbjct: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL--T 175
Query: 377 TMPDVANRQTLMFSATFPETIQ 398
+P A RQ L+FSATF + I+
Sbjct: 176 KLP--AKRQNLLFSATFSDDIK 195
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 400 (145.9 bits), Expect = 7.8e-36, P = 7.8e-36
Identities = 93/216 (43%), Positives = 129/216 (59%)
Query: 185 EVKV-SGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ V GD P+P+ +F A + ++ L ++T+PTPIQ P L GRD++G AQ
Sbjct: 78 EITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQ 137
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 138 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 194
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 195 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDM 254
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 255 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 286
Score = 400 (145.9 bits), Expect = 7.8e-36, P = 7.8e-36
Identities = 95/264 (35%), Positives = 152/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 213 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 270
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ ++Y I VG + A+ +++Q + +E
Sbjct: 271 --RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLI 328
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 329 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 388
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 389 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 448
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 449 KQ-ARELIKVLEEANQAINPKLMQ 471
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 400 (145.9 bits), Expect = 7.8e-36, P = 7.8e-36
Identities = 93/216 (43%), Positives = 129/216 (59%)
Query: 185 EVKV-SGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ V GD P+P+ +F A + ++ L ++T+PTPIQ P L GRD++G AQ
Sbjct: 78 EITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQ 137
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 138 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 194
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 195 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDM 254
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 255 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 286
Score = 400 (145.9 bits), Expect = 7.8e-36, P = 7.8e-36
Identities = 95/264 (35%), Positives = 152/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 213 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 270
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ ++Y I VG + A+ +++Q + +E
Sbjct: 271 --RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLI 328
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 329 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 388
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 389 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 448
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 449 KQ-ARELIKVLEEANQAINPKLMQ 471
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 400 (145.9 bits), Expect = 7.8e-36, P = 7.8e-36
Identities = 93/216 (43%), Positives = 129/216 (59%)
Query: 185 EVKV-SGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ V GD P+P+ +F A + ++ L ++T+PTPIQ P L GRD++G AQ
Sbjct: 78 EITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQ 137
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 138 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 194
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 195 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDM 254
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 255 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 286
Score = 400 (145.9 bits), Expect = 7.8e-36, P = 7.8e-36
Identities = 95/264 (35%), Positives = 152/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 213 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 270
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ ++Y I VG + A+ +++Q + +E
Sbjct: 271 --RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLI 328
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 329 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 388
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 389 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 448
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 449 KQ-ARELIKVLEEANQAINPKLMQ 471
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 400 (145.9 bits), Expect = 7.9e-36, P = 7.9e-36
Identities = 93/216 (43%), Positives = 129/216 (59%)
Query: 185 EVKV-SGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ V GD P+P+ +F A + ++ L ++T+PTPIQ P L GRD++G AQ
Sbjct: 78 EITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQ 137
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 138 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 194
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 195 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDM 254
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 255 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 286
Score = 389 (142.0 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 95/266 (35%), Positives = 152/266 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 213 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 270
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ ++Y I VG + A+ +++Q + +E
Sbjct: 271 --RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLI 328
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 329 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 388
Query: 568 KMKVLVATAVASRGL--DIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
K +L+AT VASRGL D++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 389 KAPILIATDVASRGLGFDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPG 448
Query: 626 QDGAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 449 NLKQ-ARELIKVLEEANQAINPKLMQ 473
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 96/251 (38%), Positives = 135/251 (53%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G ++LVAT GRL D+ + I V +VLDEADRMLDMGF+ DI ++++ +P+
Sbjct: 122 EGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEK--LPE-- 177
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQ L+FSAT + ++ + I I + AST + Q + V
Sbjct: 178 QRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHL 237
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
+ ++F+ T A + L + I + H R Q+ REQ + DFK K+ L
Sbjct: 238 IKENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFL 297
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG---A 629
VAT V SRG+DI + VINYDLP E D+Y+HRIGRTGR GN+G A SF D A
Sbjct: 298 VATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCA 357
Query: 630 IAKDLVRILEQ 640
I + L I+E+
Sbjct: 358 IERRLGHIIER 368
Score = 346 (126.9 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 78/199 (39%), Positives = 120/199 (60%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
F GL LVK + + Y PTPIQ AIP+ L G++++ AQTG+GKTA+F++P++H
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNR 319
++P ++ + II PTREL +Q+ + +YA L YGG + +
Sbjct: 63 FADAP-KIRP---KRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKK 118
Query: 320 QLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 379
+L +G ++LVAT GRL D+ + I V +VLDEADRMLDMGF+ DI ++++ +P
Sbjct: 119 RLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEK--LP 176
Query: 380 DVANRQTLMFSATFPETIQ 398
+ RQ L+FSAT + ++
Sbjct: 177 E--QRQNLLFSATLSKQVK 193
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 96/251 (38%), Positives = 135/251 (53%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G ++LVAT GRL D+ + I V +VLDEADRMLDMGF+ DI ++++ +P+
Sbjct: 122 EGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEK--LPE-- 177
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQ L+FSAT + ++ + I I + AST + Q + V
Sbjct: 178 QRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHL 237
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
+ ++F+ T A + L + I + H R Q+ REQ + DFK K+ L
Sbjct: 238 IKENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFL 297
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDG---A 629
VAT V SRG+DI + VINYDLP E D+Y+HRIGRTGR GN+G A SF D A
Sbjct: 298 VATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCA 357
Query: 630 IAKDLVRILEQ 640
I + L I+E+
Sbjct: 358 IERRLGHIIER 368
Score = 346 (126.9 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 78/199 (39%), Positives = 120/199 (60%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
F GL LVK + + Y PTPIQ AIP+ L G++++ AQTG+GKTA+F++P++H
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNR 319
++P ++ + II PTREL +Q+ + +YA L YGG + +
Sbjct: 63 FADAP-KIRP---KRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKK 118
Query: 320 QLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 379
+L +G ++LVAT GRL D+ + I V +VLDEADRMLDMGF+ DI ++++ +P
Sbjct: 119 RLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEK--LP 176
Query: 380 DVANRQTLMFSATFPETIQ 398
+ RQ L+FSAT + ++
Sbjct: 177 E--QRQNLLFSATLSKQVK 193
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 90/232 (38%), Positives = 130/232 (56%)
Query: 401 GCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVAN 460
G +ILVAT GRL D+ + + + +VLDEADRMLDMGF+ DI +++ +P+ +
Sbjct: 128 GVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIER--LPE--H 183
Query: 461 RQTLMFSATFPETIQ---KNYIF----IAVGIIGGASTDVVQTILEVPXXXXXXXXXXXX 513
RQ L+FSAT E ++ K I I++G + + Q ++ V
Sbjct: 184 RQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKSALLSHII 243
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
+ ++F+ T A + L + I SIH R Q RE+ ++DFK+ K+K LV
Sbjct: 244 TTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLV 303
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPD 625
ATA+A+RGLDI + VINYDLP ++D+Y+HRIGRTGR G G A S D
Sbjct: 304 ATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSKD 355
Score = 327 (120.2 bits), Expect = 5.3e-29, P = 5.3e-29
Identities = 77/202 (38%), Positives = 118/202 (58%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF + L ++ + YTKPT IQ+ AIP L G+D++ AQTG+GKTA+F++P++
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61
Query: 259 HLLESPGELVTGYCAQP-EVIICAPTRELVMQIHEVACKYA-YSSVLKICLHYGGASSMH 316
L E A+ +I PTREL +Q+ +YA Y + + + YGG +
Sbjct: 62 QLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAM-YGGVDAQE 120
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
++L G +ILVAT GRL D+ + + + +VLDEADRMLDMGF+ DI +++
Sbjct: 121 QKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIER- 179
Query: 377 TMPDVANRQTLMFSATFPETIQ 398
+P+ +RQ L+FSAT E ++
Sbjct: 180 -LPE--HRQNLLFSATMSEEVR 198
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 247 (92.0 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 67/203 (33%), Positives = 103/203 (50%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+ F+ L+ +V+ + Y P+ IQ+ AI EGRD++ AQ+G+GKTA F I
Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISA 81
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLH--YGGASS 314
+ + E+ E T + +I APTREL +QI V A LK+ +H GG S
Sbjct: 82 LQRINEN--EKAT------QALILAPTRELALQIKNVIT--AIGLYLKVTVHASIGGTSM 131
Query: 315 MHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQ 374
G I+V T GR+ D+++R V+ +LDEAD ML GF I ++ +
Sbjct: 132 SDDIEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFR 191
Query: 375 HSTMPDVANRQTLMFSATFPETI 397
+P+ Q ++ SAT P+ +
Sbjct: 192 --LLPETT--QIVLLSATMPQDV 210
Score = 203 (76.5 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 38/125 (30%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F +T +F+ L E ++IH Q++R+ + +F++ ++L++T + +RG
Sbjct: 266 VIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARG 325
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F D+D + +++ +
Sbjct: 326 IDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVT-DRDVGMMREIEKFYSTQ 384
Query: 642 GQPVP 646
+ +P
Sbjct: 385 IEEMP 389
Score = 114 (45.2 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ G I+V T GR+ D+++R V+ +LDEAD ML GF I ++ + +P+
Sbjct: 139 RSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFR--LLPET 196
Query: 459 ANRQTLMFSATFPETI 474
Q ++ SAT P+ +
Sbjct: 197 T--QIVLLSATMPQDV 210
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 247 (92.0 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 67/203 (33%), Positives = 103/203 (50%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+ F+ L+ +V+ + Y P+ IQ+ AI EGRD++ AQ+G+GKTA F I
Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISA 81
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLH--YGGASS 314
+ + E+ E T + +I APTREL +QI V A LK+ +H GG S
Sbjct: 82 LQRINEN--EKAT------QALILAPTRELALQIKNVIT--AIGLYLKVTVHASIGGTSM 131
Query: 315 MHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQ 374
G I+V T GR+ D+++R V+ +LDEAD ML GF I ++ +
Sbjct: 132 SDDIEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFR 191
Query: 375 HSTMPDVANRQTLMFSATFPETI 397
+P+ Q ++ SAT P+ +
Sbjct: 192 --LLPETT--QIVLLSATMPQDV 210
Score = 203 (76.5 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 38/125 (30%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F +T +F+ L E ++IH Q++R+ + +F++ ++L++T + +RG
Sbjct: 266 VIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARG 325
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F D+D + +++ +
Sbjct: 326 IDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVT-DRDVGMMREIEKFYSTQ 384
Query: 642 GQPVP 646
+ +P
Sbjct: 385 IEEMP 389
Score = 114 (45.2 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
+ G I+V T GR+ D+++R V+ +LDEAD ML GF I ++ + +P+
Sbjct: 139 RSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFR--LLPET 196
Query: 459 ANRQTLMFSATFPETI 474
Q ++ SAT P+ +
Sbjct: 197 T--QIVLLSATMPQDV 210
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 400 (145.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 93/216 (43%), Positives = 129/216 (59%)
Query: 185 EVKV-SGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ V GD P+P+ +F A + ++ L ++T+PTPIQ P L GRD++G AQ
Sbjct: 157 EITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQ 216
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 217 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 273
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 274 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDM 333
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 334 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 365
Score = 400 (145.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 95/264 (35%), Positives = 152/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 292 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 349
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ ++Y I VG + A+ +++Q + +E
Sbjct: 350 --RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLI 407
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 408 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 467
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 468 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 527
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 528 KQ-ARELIKVLEEANQAINPKLMQ 550
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 400 (145.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 93/216 (43%), Positives = 129/216 (59%)
Query: 185 EVKV-SGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ V GD P+P+ +F A + ++ L ++T+PTPIQ P L GRD++G AQ
Sbjct: 157 EITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQ 216
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 217 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 273
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 274 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDM 333
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 334 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 365
Score = 400 (145.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 95/264 (35%), Positives = 152/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 292 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 349
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ ++Y I VG + A+ +++Q + +E
Sbjct: 350 --RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLI 407
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 408 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 467
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 468 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 527
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 528 KQ-ARELIKVLEEANQAINPKLMQ 550
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 398 (145.2 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 89/202 (44%), Positives = 125/202 (61%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF S GL E LV+ ++ + YT+PTP+Q+ AIPA L+GRDLM AQTG+GKT F +PI+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 259 HLLES--PGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYS-SVLKICLHYGGASSM 315
L + P + QP V++ PTREL Q+HE YA + C+ +GG
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACI-FGGVGMN 120
Query: 316 HFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQH 375
+ + +G ++LVA GRL D+ +G + L+ V +VLDEADRMLDMGF+ D++ V+
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVL-- 178
Query: 376 STMPDVANRQTLMFSATFPETI 397
+ +P A RQ L+FSATF I
Sbjct: 179 ARLP--AKRQNLLFSATFSNDI 198
Score = 390 (142.3 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 92/248 (37%), Positives = 140/248 (56%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
+G ++LVA GRL D+ +G + L+ V +VLDEADRMLDMGF+ D++ V+ + +P A
Sbjct: 128 RGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVL--ARLP--A 183
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQ L+FSATF I N I V + Q + +
Sbjct: 184 KRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANHKRSLLAHL 243
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
+ V+VF T A+ +A YL + +A +IHG++ Q+ R +A+ DFK ++++
Sbjct: 244 ITVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIM 303
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAK 632
VAT +A+RGLDI + HV+N++LP ++YVHRIGRTGR G G A S PD++ + K
Sbjct: 304 VATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEE-KLLK 362
Query: 633 DLVRILEQ 640
+ R+ +Q
Sbjct: 363 SIERMTKQ 370
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 400 (145.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 93/216 (43%), Positives = 129/216 (59%)
Query: 185 EVKV-SGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQ 243
E+ V GD P+P+ +F A + ++ L ++T+PTPIQ P L GRD++G AQ
Sbjct: 159 EITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQ 218
Query: 244 TGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVL 303
TGSGKT A+L+P + H+ P L G P ++ APTREL Q+ +VA Y S L
Sbjct: 219 TGSGKTLAYLLPAIVHINHQP-YLERG--DGPICLVLAPTRELAQQVQQVADDYGKCSRL 275
Query: 304 KICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDM 363
K YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDM
Sbjct: 276 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDM 335
Query: 364 GFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
GF I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 336 GFEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 367
Score = 400 (145.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 95/264 (35%), Positives = 152/264 (57%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 294 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 351
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ ++Y I VG + A+ +++Q + +E
Sbjct: 352 --RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLI 409
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ I+FV T R D + + IHG + Q +R+ +++F++
Sbjct: 410 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSG 469
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++YVHRIGRT R NKG A +F+ P
Sbjct: 470 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNL 529
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
A++L+++LE+A Q + P+ ++
Sbjct: 530 KQ-ARELIKVLEEANQAINPKLMQ 552
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 397 (144.8 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 95/264 (35%), Positives = 149/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 215 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 272
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 390
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 451 KQVS-DLISVLREANQAINPKLLQ 473
Score = 392 (143.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 81 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 140
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 141 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 258 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 288
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 397 (144.8 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 95/264 (35%), Positives = 149/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 215 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 272
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 390
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 451 KQVS-DLISVLREANQAINPKLLQ 473
Score = 392 (143.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 81 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 140
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 141 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 258 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 288
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 397 (144.8 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 95/264 (35%), Positives = 149/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 215 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 272
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 390
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 451 KQVS-DLISVLREANQAINPKLLQ 473
Score = 392 (143.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 81 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 140
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 141 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 258 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 288
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 397 (144.8 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 95/264 (35%), Positives = 149/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 215 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 272
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 390
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 451 KQVS-DLISVLREANQAINPKLLQ 473
Score = 392 (143.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 81 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 140
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 141 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 258 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 288
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 397 (144.8 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 95/264 (35%), Positives = 149/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 215 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 272
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 390
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 451 KQVS-DLISVLREANQAINPKLLQ 473
Score = 392 (143.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 81 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 140
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 141 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 258 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 288
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 397 (144.8 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 95/264 (35%), Positives = 149/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 215 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 272
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 390
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 451 KQVS-DLISVLREANQAINPKLLQ 473
Score = 392 (143.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 81 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 140
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 141 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 258 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 288
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 97/253 (38%), Positives = 138/253 (54%)
Query: 401 GCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVAN 460
G +ILVAT GRL D+++ G I+ ++ VLDEAD MLDMGF D+Q ++ S +P +
Sbjct: 125 GLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSII--SKLPK--S 180
Query: 461 RQTLMFSATFPETIQ--KNYIFI---AVGIIGGAST-DVV-QTILEVPXXXXXXXXXXXX 513
RQTL+FSAT P I+ I + I T D+V Q++ +
Sbjct: 181 RQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFNIL 240
Query: 514 XXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLV 573
D + V++F T AD I L + I S+H + Q+ RE+A+ +FK ++VLV
Sbjct: 241 TKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLV 300
Query: 574 ATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKD 633
AT VA+RG+D+ I VINY+LP++ Y+HRIGRT R G G A SF + D +
Sbjct: 301 ATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFA-VEND---IRQ 356
Query: 634 LVRILEQAGQPVP 646
L I GQ +P
Sbjct: 357 LTNIENSIGQVIP 369
Score = 349 (127.9 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 82/202 (40%), Positives = 117/202 (57%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+ F++ L E ++ + Y +PTPIQK IPA + G DL+G AQTG+GKTAAF +PI
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPI 60
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMH 316
++ + ++ +I PTREL QI + Y+ LK + YGG
Sbjct: 61 INKFGRNKIDIKA---KSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQA 117
Query: 317 FNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHS 376
+E G +ILVAT GRL D+++ G I+ ++ VLDEAD MLDMGF D+Q ++ S
Sbjct: 118 QVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSII--S 175
Query: 377 TMPDVANRQTLMFSATFPETIQ 398
+P +RQTL+FSAT P I+
Sbjct: 176 KLPK--SRQTLLFSATMPAEIE 195
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 397 (144.8 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 95/264 (35%), Positives = 149/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 272 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 329
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 330 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 387
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 388 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 447
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 448 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 507
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 508 KQVS-DLISVLREANQAINPKLLQ 530
Score = 392 (143.0 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 138 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 197
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 198 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 254
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 255 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 314
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 315 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 345
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 381 (139.2 bits), Expect = 3.2e-35, P = 3.2e-35
Identities = 88/235 (37%), Positives = 138/235 (58%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +ILVAT GRL D++++ +SL V ++LDEAD+MLD+GF+ ++ + ++ +P
Sbjct: 128 ERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKN--VP-- 183
Query: 459 ANRQTLMFSATFPETIQK-NYIFIA----VGIIGGASTD--VVQTILEVPXXXXXXXXXX 511
+ RQTL FSAT P+ ++ F+ V + A+T + Q + V
Sbjct: 184 SKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASLLIE 243
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ IVF T AD + L + +I + +IHG++ QSQRE+A+ FK ++ +
Sbjct: 244 KIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPI 303
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
LVAT +A+RG+ + + HVINYDLP +++VHRIGRT R GN G A SF D+
Sbjct: 304 LVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDE 358
Score = 371 (135.7 bits), Expect = 5.2e-34, P = 5.2e-34
Identities = 88/211 (41%), Positives = 128/211 (60%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+ F+S GL ++ +L K+ YT PTPIQ+ AIP ++GRD++G AQTG+GKT AF PI
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65
Query: 257 MHHLLE--SPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASS 314
+ L SP V G V++ APTREL QI Y L++ + GGA
Sbjct: 66 LDRLSRNASPAP-VRG----TRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKI 120
Query: 315 MHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQ 374
RQLE+G +ILVAT GRL D++++ +SL V ++LDEAD+MLD+GF+ ++ + +
Sbjct: 121 GGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAK 180
Query: 375 HSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
+ +P + RQTL FSAT P+ ++ L
Sbjct: 181 N--VP--SKRQTLFFSATMPKAVESLAATFL 207
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 381 (139.2 bits), Expect = 3.2e-35, P = 3.2e-35
Identities = 87/228 (38%), Positives = 132/228 (57%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +ILVAT GRL D+ ++ + + +VLDEADRMLDMGF+ DI +++ +P+
Sbjct: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILK--LLPE-- 177
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQ L+FSATF I++ N + I+V + V Q I
Sbjct: 178 KRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKL 237
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
+ V+VF+ T A+ +A YL E + +IHG++ Q R +A+ DFK ++++L
Sbjct: 238 VKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRIL 297
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATS 620
VAT +A+RG+DI + V+N++LP+ ++YVHRIGRTGR G G+A S
Sbjct: 298 VATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAIS 345
Score = 353 (129.3 bits), Expect = 6.2e-32, P = 6.2e-32
Identities = 81/200 (40%), Positives = 116/200 (58%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
F S GL ++K +++ Y P+PIQ AIPA L G+D+M AQTG+GKTA F +PI+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNR 319
L + P Q +I PTREL QI + Y LK + +GG +
Sbjct: 63 LAKGPKVRAN----QVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118
Query: 320 QLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 379
++ KG +ILVAT GRL D+ ++ + + +VLDEADRMLDMGF+ DI +++ +P
Sbjct: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILK--LLP 176
Query: 380 DVANRQTLMFSATFPETIQK 399
+ RQ L+FSATF I++
Sbjct: 177 E--KRQNLLFSATFSTEIRE 194
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 381 (139.2 bits), Expect = 3.2e-35, P = 3.2e-35
Identities = 87/228 (38%), Positives = 132/228 (57%)
Query: 400 KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVA 459
KG +ILVAT GRL D+ ++ + + +VLDEADRMLDMGF+ DI +++ +P+
Sbjct: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILK--LLPE-- 177
Query: 460 NRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXXX 512
RQ L+FSATF I++ N + I+V + V Q I
Sbjct: 178 KRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKL 237
Query: 513 XXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVL 572
+ V+VF+ T A+ +A YL E + +IHG++ Q R +A+ DFK ++++L
Sbjct: 238 VKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRIL 297
Query: 573 VATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATS 620
VAT +A+RG+DI + V+N++LP+ ++YVHRIGRTGR G G+A S
Sbjct: 298 VATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAIS 345
Score = 353 (129.3 bits), Expect = 6.2e-32, P = 6.2e-32
Identities = 81/200 (40%), Positives = 116/200 (58%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
F S GL ++K +++ Y P+PIQ AIPA L G+D+M AQTG+GKTA F +PI+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNR 319
L + P Q +I PTREL QI + Y LK + +GG +
Sbjct: 63 LAKGPKVRAN----QVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118
Query: 320 QLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 379
++ KG +ILVAT GRL D+ ++ + + +VLDEADRMLDMGF+ DI +++ +P
Sbjct: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILK--LLP 176
Query: 380 DVANRQTLMFSATFPETIQK 399
+ RQ L+FSATF I++
Sbjct: 177 E--KRQNLLFSATFSTEIRE 194
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 235 (87.8 bits), Expect = 4.8e-35, Sum P(2) = 4.8e-35
Identities = 45/125 (36%), Positives = 79/125 (63%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F +T + D+++ L ++ A S+HG Q +R++ ++DF+T +VL++T V +RG
Sbjct: 269 VIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARG 328
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP+ I+ Y+HRIGR+GR G KG A +F D A +++ +
Sbjct: 329 IDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITK-ADLAKLREIEKFYSIK 387
Query: 642 GQPVP 646
P+P
Sbjct: 388 INPMP 392
Score = 212 (79.7 bits), Expect = 4.8e-35, Sum P(2) = 4.8e-35
Identities = 72/270 (26%), Positives = 135/270 (50%)
Query: 176 INFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEG 235
++F E+ ++K + +FES L++ L++ + + P+ IQ AI + G
Sbjct: 1 MSFDREEDQKLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISG 60
Query: 236 RDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVAC 295
+D++ AQ+G+GKTA F I ++ + +L + +I +PTREL QI +V
Sbjct: 61 KDVIAQAQSGTGKTATFTIGLLQAIDLRKKDL--------QALILSPTRELASQIGQVVK 112
Query: 296 KYA-YSSVLKICLHYGGASSMHFNRQLEK-GCNILVATMGRLKDILDRGRISLASVRFVV 353
Y +V + GG + ++++K GC + T GR+ D++ + + +V+ +V
Sbjct: 113 NLGDYMNVNAFAIT-GGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLV 171
Query: 354 LDEADRMLD--MGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNILVATMGR 411
LDEAD +L +GF I + + +P N Q ++ SAT + I + +
Sbjct: 172 LDEADELLSETLGFKQQIYDIF--AKLPK--NCQVVVVSATMNKDILEVTRKFM---NDP 224
Query: 412 LKDILDRGRISLASVR-FVV-LDEADRMLD 439
+K ++ R ISL ++ +VV +D+ + D
Sbjct: 225 VKILVKRDEISLEGIKQYVVNVDKEEWKFD 254
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 379 (138.5 bits), Expect = 5.6e-35, P = 5.6e-35
Identities = 98/249 (39%), Positives = 137/249 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
KK NI+V T GRL D ++R I L +V VV+DEAD ML+MGF+ DI+ ++ S +P
Sbjct: 119 KKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESIL--SNVP-- 174
Query: 459 ANRQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
+ QTL+FSAT P I++ ++ + V +++ Q LEV
Sbjct: 175 SEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTR 234
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ IVF T R D +A L A IHG Q++R A+ FK ++V
Sbjct: 235 LLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEV 294
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT VA+RGLDI G+ HV N+D+PQ+ + YVHRIGRTGR G G A +F P +
Sbjct: 295 LVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPRE----- 349
Query: 632 KDLVRILEQ 640
K ++R +EQ
Sbjct: 350 KSMLRAIEQ 358
Score = 335 (123.0 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 82/202 (40%), Positives = 117/202 (57%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
+F+ L L+K + + + + TPIQ IP GL +D++G AQTG+GKTAAF IP++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 259 HLL-ESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHF 317
+ ESP + I+ APTREL +Q+ E K K+ YGG
Sbjct: 64 KINPESPNI---------QAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQ 114
Query: 318 NRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
R L+K NI+V T GRL D ++R I L +V VV+DEAD ML+MGF+ DI+ ++ S
Sbjct: 115 IRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESIL--SN 172
Query: 378 MPDVANRQTLMFSATFPETIQK 399
+P + QTL+FSAT P I++
Sbjct: 173 VP--SEHQTLLFSATMPAPIKR 192
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 393 (143.4 bits), Expect = 7.3e-35, P = 7.3e-35
Identities = 95/264 (35%), Positives = 148/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G I +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 215 ERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 272
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R +++FK
Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHG 390
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 451 KQVS-DLISVLREANQAINPKLLQ 473
Score = 392 (143.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 81 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 140
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 141 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G I +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 258 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 288
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 397 (144.8 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 98/266 (36%), Positives = 152/266 (57%)
Query: 399 KKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 455
K+G I+V T GR+ D+L + GR++ L ++VLDEADRM D+GF + ++ ++
Sbjct: 539 KRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRII-NNIR 597
Query: 456 PDVANRQTLMFSATFP---ETIQKNYIFIAVGI-IGGAST--DVVQTILEV-PXXXXXXX 508
PD RQT++FSATFP E + + + V I +GG S V+ I+EV P
Sbjct: 598 PD---RQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSR 654
Query: 509 XXXXXXXXDEDGV----IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDF 564
+ + +VFV +AD + L + + SIHG + Q R+ I D+
Sbjct: 655 LLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDY 714
Query: 565 KTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDP 624
K VL+AT+V +RGLD+K ++ V+NYD P +++YVHR+GRTGR G+ G A +F P
Sbjct: 715 KAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITP 774
Query: 625 DQDGAIAKDLVRILEQAGQPVPEFLK 650
+Q+ A D+ + L+ + QPVP+ L+
Sbjct: 775 EQE-KYAVDIAKALKMSKQPVPKELQ 799
Score = 369 (135.0 bits), Expect = 4.5e-31, P = 4.5e-31
Identities = 90/225 (40%), Positives = 129/225 (57%)
Query: 186 VKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTG 245
+K+ G + P+P+ S+ GL + + Y KPT IQ AIPA GRD++G A+TG
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465
Query: 246 SGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKI 305
SGKT AFL+P+ H+ + L TG P II PTREL +QI CK + +L I
Sbjct: 466 SGKTIAFLLPMFRHIKDQR-PLKTG--EGPIAIIMTPTRELAVQIFR-ECK-PFLKLLNI 520
Query: 306 --CLHYGGASSMHFNRQLEKGCNILVATMGRLKDIL--DRGRIS-LASVRFVVLDEADRM 360
C YGGA L++G I+V T GR+ D+L + GR++ L ++VLDEADRM
Sbjct: 521 RACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRM 580
Query: 361 LDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKKGCNIL 405
D+GF + ++ ++ PD RQT++FSATFP ++ +L
Sbjct: 581 FDLGFEPQVMRII-NNIRPD---RQTVLFSATFPRAMEALARKVL 621
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 376 (137.4 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 90/238 (37%), Positives = 133/238 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K+G +++V T GRL D L + SL + +V+DEADRM DMGF+ D++ +++ +P
Sbjct: 122 KEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRR--LPPY 179
Query: 459 ANRQTLMFSATFPETIQK-NYIFI----AVGIIGGASTD--VVQTILEVPXXXXXXXXXX 511
RQ LMFSAT + + + Y F+ V + T V Q + V
Sbjct: 180 DKRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKEKFPLLLG 239
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ ++FV+T R A+F+ L + I G Q +R + + DFK+ K+ +
Sbjct: 240 LLRKEGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPI 299
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGA 629
++AT VASRGL I G+ HVINYDLPQ+ ++YVHRIGRT R G +G+A S D+DGA
Sbjct: 300 MIATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISM--ADEDGA 355
Score = 332 (121.9 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 79/200 (39%), Positives = 113/200 (56%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
F L E +++ + + ++ TPIQ+ +P L G+D+ G AQTG+GKTAAFLI +
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNR 319
LL S G G P II APTRELV+QI + A I YGG M
Sbjct: 63 LLRS-GR--GGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKN 119
Query: 320 QLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 379
L++G +++V T GRL D L + SL + +V+DEADRM DMGF+ D++ +++ +P
Sbjct: 120 ALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRR--LP 177
Query: 380 DVANRQTLMFSATFPETIQK 399
RQ LMFSAT + + +
Sbjct: 178 PYDKRQNLMFSATLNQRVME 197
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 376 (137.4 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 98/249 (39%), Positives = 135/249 (54%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
KK +I+V T GRL D ++R + L +V VVLDEAD ML+MGF+ DI+ ++ S +P
Sbjct: 119 KKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESIL--SNVP-- 174
Query: 459 ANRQTLMFSATFPETIQK-------NYIFIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
A QTL+FSAT P I++ N + V +++ Q LEV
Sbjct: 175 AEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTR 234
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ IVF T R D + L IHG Q++R A+ FK ++V
Sbjct: 235 LLDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEV 294
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT VA+RGLDI G+ HV N+D+PQ+ + YVHRIGRTGR G G A +F P +
Sbjct: 295 LVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPRE----- 349
Query: 632 KDLVRILEQ 640
KD++R +EQ
Sbjct: 350 KDMLRAIEQ 358
Score = 330 (121.2 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 82/202 (40%), Positives = 117/202 (57%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
+F+ L L K +K+ + + TPIQ IP GL +D++G AQTG+GKTAAF IP++
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 259 HLL-ESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHF 317
+ ESP + I+ APTREL +Q+ E K ++ YGG
Sbjct: 64 KINPESPNI---------QAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQ 114
Query: 318 NRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
R L+K +I+V T GRL D ++R + L +V VVLDEAD ML+MGF+ DI+ ++ S
Sbjct: 115 IRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESIL--SN 172
Query: 378 MPDVANRQTLMFSATFPETIQK 399
+P A QTL+FSAT P I++
Sbjct: 173 VP--AEHQTLLFSATMPAPIKR 192
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 234 (87.4 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 65/201 (32%), Positives = 109/201 (54%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 91
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ L E+ + + ++ APTREL QI +V Y + C+ GG +
Sbjct: 92 LQQL-----EIDL---KETQALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTNV 141
Query: 315 MHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 142 RNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIF 201
Query: 374 QHSTMPDVANRQTLMFSATFP 394
Q + N Q ++ SAT P
Sbjct: 202 QKLS----TNIQVVLLSATMP 218
Score = 209 (78.6 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 395
Query: 642 GQPVP 646
+ +P
Sbjct: 396 VEEMP 400
Score = 114 (45.2 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q +
Sbjct: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLS 205
Query: 455 MPDVANRQTLMFSATFP 471
N Q ++ SAT P
Sbjct: 206 ----TNIQVVLLSATMP 218
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 390 (142.3 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 94/264 (35%), Positives = 148/264 (56%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G +AT GRL D L+ G+ +L ++VLDEADRMLDMGF I+ ++ PD
Sbjct: 215 ERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ-IRPD- 272
Query: 459 ANRQTLMFSATFPETIQ-------KNYIFIAVGIIG-GASTDVVQTI---LEVPXXXXXX 507
RQTLM+SAT+P+ ++ K+YI I +G + A+ +++Q + +V
Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
E+ IVFV T R D + + IHG + Q +R+ +++FK
Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 390
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
K +L+AT VASRGLD++ ++ VINYD P ++Y+HRIGRT R G A +F+ P+
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
Query: 628 GAIAKDLVRILEQAGQPV-PEFLK 650
++ DL+ +L +A Q + P+ L+
Sbjct: 451 KQVS-DLISVLREANQAINPKLLQ 473
Score = 385 (140.6 bits), Expect = 9.4e-34, P = 9.4e-34
Identities = 88/215 (40%), Positives = 127/215 (59%)
Query: 185 EVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQT 244
E+ V G N P+P+ +F A ++ + + N+T+PT IQ P L G D++G AQT
Sbjct: 81 EITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQT 140
Query: 245 GSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLK 304
GSGKT ++L+P + H+ P L G P ++ APTREL Q+ +VA +Y + LK
Sbjct: 141 GSGKTLSYLLPAIVHINHQPF-LERG--DGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 305 ICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMG 364
YGGA R LE+G +AT GRL D L+ G+ +L ++VLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 365 FLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 399
F I+ ++ PD RQTLM+SAT+P+ +++
Sbjct: 258 FEPQIRKIVDQ-IRPD---RQTLMWSATWPKEVRQ 288
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 374 (136.7 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 88/253 (34%), Positives = 143/253 (56%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ + G ++L+AT GRL D L +G ++L + +V DEADRMLDMGF+ +IQ V++
Sbjct: 119 QAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQ-- 176
Query: 455 MPDVANRQTLMFSATFPETI---QKNYIF----IAVGIIGGASTDVVQTILEVPXXXXXX 507
+P A RQTL+FSAT ++I KN + I V + + Q + +
Sbjct: 177 VP--AQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTE 234
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
+ V++F T + D + L + +AT S HG Q RE+ + +FK
Sbjct: 235 FVSHLVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQG 294
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
++VLVAT VA+RGLDI +++VIN++LP ++Y+HRIGRTGR G+ G A + + +D
Sbjct: 295 LVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFS-QED 353
Query: 628 GAIAKDLVRILEQ 640
+ +++ +L++
Sbjct: 354 ALLLEEVETLLDK 366
Score = 359 (131.4 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 86/208 (41%), Positives = 126/208 (60%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF + L LV L + Y +PTPIQ AIPA L +D+M AQTG+GKTAAF +PI+
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 259 HLLESPGELVTGYCAQP-EVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHF 317
LL + + + + A+ ++ PTREL +Q+ + KYA + +++ + YGG S
Sbjct: 62 -LLMADNQ--SDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQ 118
Query: 318 NRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
G ++L+AT GRL D L +G ++L + +V DEADRMLDMGF+ +IQ V++
Sbjct: 119 QAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQ-- 176
Query: 378 MPDVANRQTLMFSATFPETIQKKGCNIL 405
+P A RQTL+FSAT ++I N+L
Sbjct: 177 VP--AQRQTLLFSATLDDSIFSFSKNLL 202
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 374 (136.7 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 88/253 (34%), Positives = 143/253 (56%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ + G ++L+AT GRL D L +G ++L + +V DEADRMLDMGF+ +IQ V++
Sbjct: 119 QAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQ-- 176
Query: 455 MPDVANRQTLMFSATFPETI---QKNYIF----IAVGIIGGASTDVVQTILEVPXXXXXX 507
+P A RQTL+FSAT ++I KN + I V + + Q + +
Sbjct: 177 VP--AQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTE 234
Query: 508 XXXXXXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTK 567
+ V++F T + D + L + +AT S HG Q RE+ + +FK
Sbjct: 235 FVSHLVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQG 294
Query: 568 KMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQD 627
++VLVAT VA+RGLDI +++VIN++LP ++Y+HRIGRTGR G+ G A + + +D
Sbjct: 295 LVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFS-QED 353
Query: 628 GAIAKDLVRILEQ 640
+ +++ +L++
Sbjct: 354 ALLLEEVETLLDK 366
Score = 359 (131.4 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 86/208 (41%), Positives = 126/208 (60%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
SF + L LV L + Y +PTPIQ AIPA L +D+M AQTG+GKTAAF +PI+
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 259 HLLESPGELVTGYCAQP-EVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHF 317
LL + + + + A+ ++ PTREL +Q+ + KYA + +++ + YGG S
Sbjct: 62 -LLMADNQ--SDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQ 118
Query: 318 NRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 377
G ++L+AT GRL D L +G ++L + +V DEADRMLDMGF+ +IQ V++
Sbjct: 119 QAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQ-- 176
Query: 378 MPDVANRQTLMFSATFPETIQKKGCNIL 405
+P A RQTL+FSAT ++I N+L
Sbjct: 177 VP--AQRQTLLFSATLDDSIFSFSKNLL 202
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 374 (136.7 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 93/239 (38%), Positives = 132/239 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
KK +++V T GR+ D ++RG + L V VVLDEAD ML+MGF+ DI+ ++ H +P
Sbjct: 118 KKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSH--VP-- 173
Query: 459 ANRQTLMFSATFPETIQK---NYI----FIAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
A RQTL+FSAT P+ I++ ++ + V ++ Q LEV
Sbjct: 174 AERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTR 233
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
+ IVF T R D +A L A IHG Q++R + FK +++
Sbjct: 234 LLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEI 293
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAI 630
LVAT VA+RGLDI G+ HV N+D+PQ+ + YVHRIGRTGR G G A +F P + G +
Sbjct: 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQL 352
Score = 340 (124.7 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 79/201 (39%), Positives = 122/201 (60%)
Query: 199 SFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMH 258
+F+ GL + ++K +++ + + TPIQ IP L+ +D++G AQTG+GKTAAF IPI+
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIV- 61
Query: 259 HLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFN 318
E V + + ++ APTREL +Q+ E K +++ YGG
Sbjct: 62 -------EKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQI 114
Query: 319 RQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTM 378
R L+K +++V T GR+ D ++RG + L V VVLDEAD ML+MGF+ DI+ ++ H +
Sbjct: 115 RALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSH--V 172
Query: 379 PDVANRQTLMFSATFPETIQK 399
P A RQTL+FSAT P+ I++
Sbjct: 173 P--AERQTLLFSATMPDPIRR 191
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 233 (87.1 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 65/203 (32%), Positives = 108/203 (53%)
Query: 198 ESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIM 257
++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I+
Sbjct: 37 DNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 96
Query: 258 HHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLH--YGGASSM 315
L E+ + + ++ APTREL QI +V A + H GG +
Sbjct: 97 QQL-----EIEQ---KETQALVLAPTRELAQQIQKVIL--ALGDYMGASCHACIGGTNVR 146
Query: 316 HFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQ 374
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q
Sbjct: 147 NEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQ 206
Query: 375 HSTMPDVANRQTLMFSATFPETI 397
+ N Q ++ SAT P +
Sbjct: 207 KLS----TNIQVVLLSATMPADV 225
Score = 208 (78.3 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 281 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARG 340
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 341 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 399
Query: 642 GQPVP 646
+ +P
Sbjct: 400 VEEMP 404
Score = 115 (45.5 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q +
Sbjct: 150 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLS 209
Query: 455 MPDVANRQTLMFSATFPETI 474
N Q ++ SAT P +
Sbjct: 210 ----TNIQVVLLSATMPADV 225
>ASPGD|ASPL0000042587 [details] [associations]
symbol:AN1750 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:AACD01000027 EMBL:BN001307 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14805 HOGENOM:HOG000290702 RefSeq:XP_659354.1
ProteinModelPortal:Q5BCI0 STRING:Q5BCI0 PRIDE:Q5BCI0
EnsemblFungi:CADANIAT00008396 GeneID:2875695 KEGG:ani:AN1750.2
OMA:VEEGYFA OrthoDB:EOG44J5S7 Uniprot:Q5BCI0
Length = 770
Score = 240 (89.5 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 72/230 (31%), Positives = 116/230 (50%)
Query: 158 KDVDQSEDNLFSSGIQTGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSN 217
KD Q++D I +G++F+ E+ D+ I ++E GL + +L K
Sbjct: 166 KDGAQAKDR----SITSGLSFAALED-----EADDDGADISAWEPLGLSPETLTSLSKLK 216
Query: 218 YTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEV 277
++ PT +QK IP L+G D++G A TGSGKT AF +PI+ H LE + E
Sbjct: 217 FSTPTSVQKSCIPPILDGHDVIGKASTGSGKTLAFGLPILEHYLERERRKTIDSEEEKEK 276
Query: 278 I----ICAPTRELVMQIHEVACKYAYSSV-------LKICLHYGGASSMHFNRQLEKGCN 326
I I +PTREL Q+ K+ Y + + L GG S R LE +
Sbjct: 277 IPIALILSPTRELAHQLQ----KHIYGLISNAPGVNARTALLTGGLSVQKQQRLLETA-D 331
Query: 327 ILVATMGRLKDILDRGR---ISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
I++ T GR+ ++L G+ + ++F+V+DEADR+L G +++ ++
Sbjct: 332 IVIGTPGRVWEVLRTGQGLIRRMQGIKFLVIDEADRLLSEGHFKEVEDIL 381
Score = 184 (69.8 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 480 FIAVGIIGGASTDVVQTILEVPXXXXXXXXXXXXXXXDEDGVIVFVSTIRNADFIACYLC 539
FI V + + + + I+E P + +VF ++I I L
Sbjct: 461 FIDVNPVSQMAEGLKEGIVECPAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRITQLLQ 520
Query: 540 ETEIATTSIHGSRLQSQREQAIHDFKTKKMK---VLVATAVASRGLDIKGIRHVINYDLP 596
++ ++H S Q R +++ F + +LVAT VA+RGLDIKGI VI+Y P
Sbjct: 521 TLQLPALALHSSMAQKARLRSVERFSSSTANPGTILVATDVAARGLDIKGIDFVIHYHAP 580
Query: 597 QEIDEYVHRIGRTGRVGNKGRATSFYDPDQ 626
+ D YVHR GRT R G G++ P++
Sbjct: 581 RTADTYVHRSGRTARAGASGKSVIICSPEE 610
Score = 85 (35.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 376 STMPDVANRQTLMFSATFPETIQK--KGCNILVATMGRLKDILDRGR--IS-LASVRFVV 430
S P V R L+ + Q+ + +I++ T GR+ ++L G+ I + ++F+V
Sbjct: 302 SNAPGVNARTALLTGGLSVQKQQRLLETADIVIGTPGRVWEVLRTGQGLIRRMQGIKFLV 361
Query: 431 LDEADRMLDMGFLGDIQHVM 450
+DEADR+L G +++ ++
Sbjct: 362 IDEADRLLSEGHFKEVEDIL 381
Score = 71 (30.1 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 353 VLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKK 400
+L DR+ D G + + + +P V RQTL+FSATF +Q+K
Sbjct: 380 ILSSLDRVEDGGPPDEEDDSSEENVVPGV-ERQTLVFSATFHRDLQQK 426
Score = 66 (28.3 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 430 VLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQK 476
+L DR+ D G + + + +P V RQTL+FSATF +Q+
Sbjct: 380 ILSSLDRVEDGGPPDEEDDSSEENVVPGV-ERQTLVFSATFHRDLQQ 425
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 372 (136.0 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 90/254 (35%), Positives = 137/254 (53%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
K G ++VA GRL D + +G I L+ + +VLDEAD+M DMGFL DI+ V++H +P
Sbjct: 118 KAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKH--LPP- 174
Query: 459 ANRQTLMFSATFP---ETIQKNYIF----IAVGIIGGASTDVVQTILEVPXXXXXXXXXX 511
RQTL+FSAT P T+ ++ + + VG + A T V + V
Sbjct: 175 -RRQTLLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAVT-VAHALYPVEQHLKTPLLLE 232
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
D + V++F T A + L + S+ G+ Q++R+ A+ F+ ++
Sbjct: 233 LLRHTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQI 292
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIA 631
LVAT +A+RG+D+ + HVINYD+P + Y+HRIGRTGR G A + D DGA+
Sbjct: 293 LVATDIAARGIDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSD-DGAMV 351
Query: 632 KDLVRILEQAGQPV 645
+ + R L G P+
Sbjct: 352 RAIERSL---GAPI 362
Score = 365 (133.5 bits), Expect = 2.6e-33, P = 2.6e-33
Identities = 87/207 (42%), Positives = 122/207 (58%)
Query: 200 FESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHH 259
F+S G + + + Y PTPIQ AIPA + GRD+MG AQTG+GKTAAF +PI+H
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHR 62
Query: 260 LLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNR 319
L + GE + ++ APTREL QI++ + L+ YGG +
Sbjct: 63 LQQ--GER-----GRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQ 115
Query: 320 QLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMP 379
+L+ G ++VA GRL D + +G I L+ + +VLDEAD+M DMGFL DI+ V++H +P
Sbjct: 116 KLKAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKH--LP 173
Query: 380 DVANRQTLMFSATFPETIQKKGCNILV 406
RQTL+FSAT P I+ +ILV
Sbjct: 174 P--RRQTLLFSATMPIDIRTLAQDILV 198
>UNIPROTKB|G4MSR4 [details] [associations]
symbol:MGG_07099 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_003715292.1 EnsemblFungi:MGG_07099T0
GeneID:2682984 KEGG:mgr:MGG_07099 Uniprot:G4MSR4
Length = 717
Score = 286 (105.7 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 84/244 (34%), Positives = 131/244 (53%)
Query: 172 IQTGINF-SGWE-NVEVKVS-GDNPPRPIESFESAGLREILVKNLKKS-NYTKPTPIQKY 227
+QT F SG E E+ V G A + E ++K + Y T +Q
Sbjct: 48 LQTSRLFTSGAEAQQELSVQPGSTKITKFSDLAKANIDESIIKAITVDMRYEDMTDVQSM 107
Query: 228 AIPAGLEGRDLMGCAQTGSGKTAAFLIPIMHHLLES-PG--ELVTGY---CAQPE---VI 278
+ L+G+DL+ A+TG+GKT AFLIP++ +L++ P E+ G AQ + I
Sbjct: 108 TLAPALKGKDLVAQAKTGTGKTLAFLIPVIQKILDADPSLKEVSRGRPRRFAQRQSIKAI 167
Query: 279 ICAPTRELVMQIHEVACKYAYSSVLKICLHYGGASSMHFNRQLE-KGCNILVATMGRLKD 337
I +PTREL QI + A + + + + GG R++ +GC++LV T GRL D
Sbjct: 168 IISPTRELAEQIGKEATRLCQRNGVTVQTAVGGTGKRESLRRIHMEGCHLLVGTPGRLND 227
Query: 338 IL--DRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVAN--RQTLMFSATF 393
+L + I ++V+ +VLDEADRMLD+GF +++ ++ +PD RQTL+FSAT
Sbjct: 228 LLSDELSGIDASNVQALVLDEADRMLDVGFENELRSIVD--MLPDRQQVPRQTLLFSATL 285
Query: 394 PETI 397
P+ +
Sbjct: 286 PKNV 289
Score = 169 (64.5 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 42/105 (40%), Positives = 65/105 (61%)
Query: 397 IQKKGCNILVATMGRLKDIL--DRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
I +GC++LV T GRL D+L + I ++V+ +VLDEADRMLD+GF +++ ++
Sbjct: 210 IHMEGCHLLVGTPGRLNDLLSDELSGIDASNVQALVLDEADRMLDVGFENELRSIVD--M 267
Query: 455 MPDVAN--RQTLMFSATFPETIQKNYIFIAVGIIGGASTDVVQTI 497
+PD RQTL+FSAT P KN + +A + + + VQT+
Sbjct: 268 LPDRQQVPRQTLLFSATLP----KNVVGLARWYVDKQNFEFVQTV 308
Score = 159 (61.0 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 548 IHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIG 607
IH Q+QR +A F+ K +L++T V +RG+D + HVI LP + ++Y+HR+G
Sbjct: 391 IHAQLSQNQRTKAADYFRKSKSGILISTDVTARGMDFPNVTHVIQVGLPPDQEQYIHRLG 450
Query: 608 RTGRVGNKGRATSFYDPDQD 627
RT R G G+ F P D
Sbjct: 451 RTARAGKDGQGWLFV-PHYD 469
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 229 (85.7 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 91
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ L E+ + + ++ APTREL QI +V Y + C+ GG +
Sbjct: 92 LQQL-----EIEF---KETQALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTNV 141
Query: 315 MHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 142 RNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIF 201
Query: 374 QHSTMPDVANRQTLMFSATFPETI 397
Q + Q ++ SAT P +
Sbjct: 202 QKLN----TSIQVVLLSATMPTDV 221
Score = 209 (78.6 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 395
Query: 642 GQPVP 646
+ +P
Sbjct: 396 VEEMP 400
Score = 109 (43.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q
Sbjct: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLN 205
Query: 455 MPDVANRQTLMFSATFPETI 474
+ Q ++ SAT P +
Sbjct: 206 ----TSIQVVLLSATMPTDV 221
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 229 (85.7 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 91
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ L E+ + + ++ APTREL QI +V Y + C+ GG +
Sbjct: 92 LQQL-----EIEF---KETQALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTNV 141
Query: 315 MHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 142 RNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIF 201
Query: 374 QHSTMPDVANRQTLMFSATFPETI 397
Q + Q ++ SAT P +
Sbjct: 202 QKLN----TSIQVVLLSATMPTDV 221
Score = 209 (78.6 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 395
Query: 642 GQPVP 646
+ +P
Sbjct: 396 VEEMP 400
Score = 109 (43.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q
Sbjct: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLN 205
Query: 455 MPDVANRQTLMFSATFPETI 474
+ Q ++ SAT P +
Sbjct: 206 ----TSIQVVLLSATMPTDV 221
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 229 (85.7 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 91
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ L E+ + + ++ APTREL QI +V Y + C+ GG +
Sbjct: 92 LQQL-----EIEF---KETQALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTNV 141
Query: 315 MHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 142 RNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIF 201
Query: 374 QHSTMPDVANRQTLMFSATFPETI 397
Q + Q ++ SAT P +
Sbjct: 202 QKLN----TSIQVVLLSATMPTDV 221
Score = 209 (78.6 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 395
Query: 642 GQPVP 646
+ +P
Sbjct: 396 VEEMP 400
Score = 109 (43.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q
Sbjct: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLN 205
Query: 455 MPDVANRQTLMFSATFPETI 474
+ Q ++ SAT P +
Sbjct: 206 ----TSIQVVLLSATMPTDV 221
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 229 (85.7 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 91
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ L E+ + + ++ APTREL QI +V Y + C+ GG +
Sbjct: 92 LQQL-----EIEF---KETQALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTNV 141
Query: 315 MHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 142 RNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIF 201
Query: 374 QHSTMPDVANRQTLMFSATFPETI 397
Q + Q ++ SAT P +
Sbjct: 202 QKLN----TSIQVVLLSATMPTDV 221
Score = 209 (78.6 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 395
Query: 642 GQPVP 646
+ +P
Sbjct: 396 VEEMP 400
Score = 109 (43.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q
Sbjct: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLN 205
Query: 455 MPDVANRQTLMFSATFPETI 474
+ Q ++ SAT P +
Sbjct: 206 ----TSIQVVLLSATMPTDV 221
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 229 (85.7 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 91
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ L E+ + + ++ APTREL QI +V Y + C+ GG +
Sbjct: 92 LQQL-----EIEF---KETQALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTNV 141
Query: 315 MHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 142 RNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIF 201
Query: 374 QHSTMPDVANRQTLMFSATFPETI 397
Q + Q ++ SAT P +
Sbjct: 202 QKLN----TSIQVVLLSATMPTDV 221
Score = 209 (78.6 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 395
Query: 642 GQPVP 646
+ +P
Sbjct: 396 VEEMP 400
Score = 109 (43.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q
Sbjct: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLN 205
Query: 455 MPDVANRQTLMFSATFPETI 474
+ Q ++ SAT P +
Sbjct: 206 ----TSIQVVLLSATMPTDV 221
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 229 (85.7 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 91
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ L E+ + + ++ APTREL QI +V Y + C+ GG +
Sbjct: 92 LQQL-----EIEF---KETQALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTNV 141
Query: 315 MHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 142 RNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIF 201
Query: 374 QHSTMPDVANRQTLMFSATFPETI 397
Q + Q ++ SAT P +
Sbjct: 202 QKLN----TSIQVVLLSATMPTDV 221
Score = 209 (78.6 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 395
Query: 642 GQPVP 646
+ +P
Sbjct: 396 VEEMP 400
Score = 109 (43.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q
Sbjct: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLN 205
Query: 455 MPDVANRQTLMFSATFPETI 474
+ Q ++ SAT P +
Sbjct: 206 ----TSIQVVLLSATMPTDV 221
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 229 (85.7 bits), Expect = 6.6e-34, Sum P(2) = 6.6e-34
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+++F+ L+E L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 33 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 92
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ L E+ + + ++ APTREL QI +V Y + C+ GG +
Sbjct: 93 LQQL-----EIEF---KETQALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTNV 142
Query: 315 MHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 143 RNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIF 202
Query: 374 QHSTMPDVANRQTLMFSATFPETI 397
Q + Q ++ SAT P +
Sbjct: 203 QKLN----TSIQVVLLSATMPTDV 222
Score = 209 (78.6 bits), Expect = 6.6e-34, Sum P(2) = 6.6e-34
Identities = 39/125 (31%), Positives = 73/125 (58%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 278 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 337
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A +F ++D I +D+
Sbjct: 338 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT-EEDKRILRDIETFYNTT 396
Query: 642 GQPVP 646
+ +P
Sbjct: 397 VEEMP 401
Score = 109 (43.4 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q
Sbjct: 147 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLN 206
Query: 455 MPDVANRQTLMFSATFPETI 474
+ Q ++ SAT P +
Sbjct: 207 ----TSIQVVLLSATMPTDV 222
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 238 (88.8 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 66/205 (32%), Positives = 110/205 (53%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
++SF+ LRE L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 54 VDSFDDMNLRETLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 113
Query: 257 MHHL-LESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGAS 313
+ + +E G + ++ APTREL QI +V Y + C+ GG +
Sbjct: 114 LQQIDIELKGT---------QALVLAPTRELAQQIQKVILALGDYMGATCHACI--GGTN 162
Query: 314 SMHFNRQLE-KGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHV 372
+ ++L+ + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I +
Sbjct: 163 VRNEVQKLQAEAPHIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSRGFKDQIYEI 222
Query: 373 MQHSTMPDVANRQTLMFSATFPETI 397
Q + + Q ++ SAT P +
Sbjct: 223 FQKLS----TSIQVVLLSATMPAEV 243
Score = 199 (75.1 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 38/125 (30%), Positives = 69/125 (55%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q R+ + +F++ +VL+ T + +RG
Sbjct: 299 VIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLARG 358
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A + D D +D+
Sbjct: 359 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTED-DKRTLRDIETFYNTT 417
Query: 642 GQPVP 646
+ +P
Sbjct: 418 VEEMP 422
Score = 112 (44.5 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHST 454
+ +Q + +I+V T GR+ D+L+R +S ++ VLDEAD ML GF I + Q +
Sbjct: 168 QKLQAEAPHIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSRGFKDQIYEIFQKLS 227
Query: 455 MPDVANRQTLMFSATFPETI 474
+ Q ++ SAT P +
Sbjct: 228 ----TSIQVVLLSATMPAEV 243
Score = 44 (20.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 545 TTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHV-INYD 594
+TSI L + + D TK M+ V V L ++GIR IN +
Sbjct: 227 STSIQVVLLSATMPAEVLDVTTKFMREPVRILVKKEELTLEGIRQFYINVE 277
>POMBASE|SPBC4F6.07c [details] [associations]
symbol:SPBC4F6.07c "ATP-dependent RNA helicase Mak5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC4F6.07c
GO:GO:0005524 GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14805 HOGENOM:HOG000290702
OMA:VEEGYFA OrthoDB:EOG44J5S7 PIR:T40504 RefSeq:NP_596107.1
ProteinModelPortal:O74393 STRING:O74393 EnsemblFungi:SPBC4F6.07c.1
GeneID:2540874 KEGG:spo:SPBC4F6.07c NextBio:20801990 Uniprot:O74393
Length = 648
Score = 268 (99.4 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 71/229 (31%), Positives = 119/229 (51%)
Query: 174 TGINFSGWENVEVKVSGDNPPRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGL 233
T N++ + +E + ++ + ++ L ++ +L K+ ++KP PIQ IP
Sbjct: 98 TSKNYNEFSTLEEEDEHNSHGVDVSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEAS 157
Query: 234 EGRDLMGCAQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEV 293
G D++G A TGSGKT AF IPI+ H L + V Q ++ APTREL QI +
Sbjct: 158 IGFDIIGKADTGSGKTLAFGIPILEHCLRN----VDAKYVQ--ALVVAPTRELAHQICQH 211
Query: 294 ACKYAYSSVLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRIS--LASVRF 351
S +++ GG + R L K +++VAT GRL +++ ++ ++
Sbjct: 212 FELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKC 271
Query: 352 VVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETIQKK 400
+VLDEADR+L ++ +++ P RQT +FSATF E +Q++
Sbjct: 272 LVLDEADRLLQKSHFEELSKLLEILGNPMHTQRQTFIFSATFDEGLQQR 320
Score = 175 (66.7 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
+VF + I + I +L E ++ + +H Q +R Q++ FK VLV T VA+RG
Sbjct: 393 MVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAARG 452
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKG 616
+DI + HVI+Y +P D YVHR GRT R G
Sbjct: 453 IDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDG 487
Score = 117 (46.2 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 395 ETIQKKGCNILVATMGRLKDILDRGRIS--LASVRFVVLDEADRMLDMGFLGDIQHVMQH 452
+ + K +++VAT GRL +++ ++ ++ +VLDEADR+L ++ +++
Sbjct: 236 QRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEI 295
Query: 453 STMPDVANRQTLMFSATFPETIQK 476
P RQT +FSATF E +Q+
Sbjct: 296 LGNPMHTQRQTFIFSATFDEGLQQ 319
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 234 (87.4 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 65/204 (31%), Positives = 107/204 (52%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
++SF+ LRE L++ + + KP+ IQ+ AI ++G D++ AQ+G+GKTA F I I
Sbjct: 31 VDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYA-Y-SSVLKICLHYGGASS 314
+ + EL + ++ APTREL QI +V Y + C+ GG +
Sbjct: 91 LQQI---DVELKA-----TQAMVLAPTRELAQQIQKVVLALGDYMGATCHACI--GGTNV 140
Query: 315 MHFNRQLEKGC-NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVM 373
+ ++L+ +I+V T GR+ D+L+R +S ++ LDEAD ML GF I +
Sbjct: 141 RNDVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIF 200
Query: 374 QHSTMPDVANRQTLMFSATFPETI 397
Q + Q ++ SAT P+ +
Sbjct: 201 QKLA----TDTQVILLSATMPQEV 220
Score = 201 (75.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 38/125 (30%), Positives = 70/125 (56%)
Query: 522 IVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKVLVATAVASRG 581
++F++T R D++ + + +++HG Q +R+ + +F++ +VL+ T + +RG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARG 335
Query: 582 LDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQDGAIAKDLVRILEQA 641
+D++ + VINYDLP + Y+HRIGR GR G KG A + D D +D+
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITED-DKRTLRDIETFYNTT 394
Query: 642 GQPVP 646
+ +P
Sbjct: 395 VEEMP 399
Score = 107 (42.7 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 403 NILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQ 462
+I+V T GR+ D+L+R +S ++ LDEAD ML GF I + Q + Q
Sbjct: 153 HIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLA----TDTQ 208
Query: 463 TLMFSATFPETI 474
++ SAT P+ +
Sbjct: 209 VILLSATMPQEV 220
Score = 38 (18.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 553 LQSQREQAIHDFKTKKMKVLVATAVASRGLDIKGIRHV-INYD 594
L + Q + + TK M+ V V L ++GIR IN +
Sbjct: 212 LSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVE 254
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 368 (134.6 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 86/227 (37%), Positives = 126/227 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G ++V T GR+ D + R A ++ V+LDEAD MLDMGF+ DI+ ++ +T+ +
Sbjct: 117 RQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAIL--NTLTN- 173
Query: 459 ANRQTLMFSATFP---ETIQKNYI--FIAVGIIGGAST--DVVQTILEVPXXXXXXXXXX 511
+QTL+FSAT P +TI K ++ + V ++G T + Q E+P
Sbjct: 174 -RQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVS 232
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
IVF T + D + L A +HG Q +R Q I FK K ++
Sbjct: 233 ILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTEL 292
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRA 618
LVAT VA+RGLDI + HVIN+D+PQ + Y+HRIGRTGR G +G+A
Sbjct: 293 LVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKA 339
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 91/225 (40%), Positives = 130/225 (57%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+E F+ GL L+K + + PTPIQK AIP LEG +L+G A TG+GKTAA+L+P+
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQI-HEVACKYAYSSVLKICLHYGGASSM 315
+ + G AQ V+I PTREL +Q+ EVA Y V + + YGG +
Sbjct: 61 LQRIQR-------GKKAQ--VLIVTPTRELALQVADEVAKLGKYLKVRALAV-YGGQAIE 110
Query: 316 HFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQH 375
R L +G ++V T GR+ D + R A ++ V+LDEAD MLDMGF+ DI+ ++
Sbjct: 111 RQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAIL-- 168
Query: 376 STMPDVANRQTLMFSATFP---ETIQKK--GCNILVATMGRLKDI 415
+T+ + +QTL+FSAT P +TI KK G V +GR K +
Sbjct: 169 NTLTN--RQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTV 211
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 368 (134.6 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 86/227 (37%), Positives = 126/227 (55%)
Query: 399 KKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDV 458
++G ++V T GR+ D + R A ++ V+LDEAD MLDMGF+ DI+ ++ +T+ +
Sbjct: 117 RQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAIL--NTLTN- 173
Query: 459 ANRQTLMFSATFP---ETIQKNYI--FIAVGIIGGAST--DVVQTILEVPXXXXXXXXXX 511
+QTL+FSAT P +TI K ++ + V ++G T + Q E+P
Sbjct: 174 -RQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVS 232
Query: 512 XXXXXDEDGVIVFVSTIRNADFIACYLCETEIATTSIHGSRLQSQREQAIHDFKTKKMKV 571
IVF T + D + L A +HG Q +R Q I FK K ++
Sbjct: 233 ILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTEL 292
Query: 572 LVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRA 618
LVAT VA+RGLDI + HVIN+D+PQ + Y+HRIGRTGR G +G+A
Sbjct: 293 LVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKA 339
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 91/225 (40%), Positives = 130/225 (57%)
Query: 197 IESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGCAQTGSGKTAAFLIPI 256
+E F+ GL L+K + + PTPIQK AIP LEG +L+G A TG+GKTAA+L+P+
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 257 MHHLLESPGELVTGYCAQPEVIICAPTRELVMQI-HEVACKYAYSSVLKICLHYGGASSM 315
+ + G AQ V+I PTREL +Q+ EVA Y V + + YGG +
Sbjct: 61 LQRIQR-------GKKAQ--VLIVTPTRELALQVADEVAKLGKYLKVRALAV-YGGQAIE 110
Query: 316 HFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQH 375
R L +G ++V T GR+ D + R A ++ V+LDEAD MLDMGF+ DI+ ++
Sbjct: 111 RQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAIL-- 168
Query: 376 STMPDVANRQTLMFSATFP---ETIQKK--GCNILVATMGRLKDI 415
+T+ + +QTL+FSAT P +TI KK G V +GR K +
Sbjct: 169 NTLTN--RQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTV 211
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 378 (138.1 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 96/264 (36%), Positives = 147/264 (55%)
Query: 404 ILVATMGRLKDILDRGRISLASVRFVVLDEADRMLDMGFLGDIQHVMQHSTMPDVANRQT 463
I+V T GR+ D ++ G +SL ++ F+V+DEADR+++MGF I + +S PD RQ
Sbjct: 265 IVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIF-NSIRPD---RQV 320
Query: 464 LMFSATFPETIQ---KNYIFIAVGI-IGG----ASTDVVQTILEVPXXXXXXXXXXXXX- 514
L +SAT+P+ + + +I + + IG A+ ++ Q VP
Sbjct: 321 LYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVDALMDTLG 380
Query: 515 ---XXDEDG-VIVFVSTIRNADFIACYLCET--EIATTSIHGSRLQSQREQAIHDFKTKK 568
DE ++F T + AD + Y+ + ++HG Q++RE+ + DFK K+
Sbjct: 381 EIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERIVQDFKNKR 440
Query: 569 MKVLVATAVASRGLDIKGIRHVINYDLPQEIDEYVHRIGRTGRVGNKGRATSFYDPDQ-- 626
+ ++VAT VASRGLDIKGI HVIN+ LP + + YVHRIGRTGR G G + S +
Sbjct: 441 LDIVVATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAGALGTSHSILSNNSLD 500
Query: 627 DGAIAKDLVRILEQAGQPVP-EFL 649
D + DL +L+++ Q VP EFL
Sbjct: 501 DMELVGDLTNLLQRSEQEVPSEFL 524
Score = 368 (134.6 bits), Expect = 8.6e-32, P = 8.6e-32
Identities = 80/216 (37%), Positives = 126/216 (58%)
Query: 185 EVKVSGDNP---PRPIESFESAGLREILVKNLKKSNYTKPTPIQKYAIPAGLEGRDLMGC 241
E+ + +N P+PI++ ES + +KN + KPTP+Q P L G D++G
Sbjct: 124 EISIKKENNFYLPKPIDTIESVPFQST-IKNFLSKKFEKPTPVQSLGWPIALSGSDMLGI 182
Query: 242 AQTGSGKTAAFLIPIMHHLLESPGELVTGYCAQPEVIICAPTRELVMQIHEVACKYAYSS 301
++TGSGKT +F++P + H+L P + Y P V++ APTREL QI++ A +Y
Sbjct: 183 SKTGSGKTLSFILPAIEHILAQPRQ---SYYPGPSVLVVAPTRELANQINQEAEQYLRLV 239
Query: 302 VLKICLHYGGASSMHFNRQLEKGCNILVATMGRLKDILDRGRISLASVRFVVLDEADRML 361
++I YGGA QL + I+V T GR+ D ++ G +SL ++ F+V+DEADR++
Sbjct: 240 NIEIATIYGGAPRRSQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLM 299
Query: 362 DMGFLGDIQHVMQHSTMPDVANRQTLMFSATFPETI 397
+MGF I + +S PD RQ L +SAT+P+ +
Sbjct: 300 EMGFEQQIDGIF-NSIRPD---RQVLYWSATWPKKV 331
Score = 38 (18.4 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 155 YIPKDVDQSEDNLFSSGIQ 173
Y+PK +D E F S I+
Sbjct: 134 YLPKPIDTIESVPFQSTIK 152
WARNING: HSPs involving 675 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 693 551 0.00097 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 925
No. of states in DFA: 615 (65 KB)
Total size of DFA: 292 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.01u 0.16s 41.17t Elapsed: 00:00:01
Total cpu time: 41.08u 0.16s 41.24t Elapsed: 00:00:02
Start: Thu Aug 15 14:23:13 2013 End: Thu Aug 15 14:23:15 2013
WARNINGS ISSUED: 2