Your job contains 1 sequence.
>psy16040
MLTKAQLVLSKLKYGVLSLEHTLACTLGFQPPPPIEVTSMEVCYQRNWHKQAVTSVIIGL
DFNVAVTQNSSVLTPKPVTKLSLKELFDTSILWAVPKKVEDAHAENRPDSLQHMCKMIDV
SSDQVPNAMFSNSSLFFISDFNVAVTQISSVLTPKPVTKLSLKELFDTSILWAVPKKRRS
LERRMNRKYGSKDQVWKMLMPRTDLTVCNTCGYTHHSKTLCGKYYSLSISRVKCSFPSLL
KVMYPYGLTTNLEKDKYQSCDIVIQRNCIYNTILFLFTGNCYAKIKEETTRLQDKIVEAL
GLNPVDKEVVVLYKGEKEHASEEFSETHRVIEVEGERPPWFSKNLLQKTTQKPSDSTD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16040
(358 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039835 - symbol:mRpL32 "mitochondrial ribosomal p... 221 4.9e-23 2
UNIPROTKB|F1NAM9 - symbol:MRPL32 "Uncharacterized protein... 114 4.7e-10 2
UNIPROTKB|I3LTC4 - symbol:MRPL32 "Uncharacterized protein... 105 2.0e-09 2
MGI|MGI:2137226 - symbol:Mrpl32 "mitochondrial ribosomal ... 108 2.4e-09 2
RGD|1310541 - symbol:Mrpl32 "mitochondrial ribosomal prot... 108 6.3e-09 2
UNIPROTKB|Q2TBI6 - symbol:MRPL32 "39S ribosomal protein L... 107 1.1e-08 2
UNIPROTKB|Q9BYC8 - symbol:MRPL32 "39S ribosomal protein L... 92 1.0e-06 2
WB|WBGene00016249 - symbol:mrpl-32 species:6239 "Caenorha... 111 0.00013 1
>FB|FBgn0039835 [details] [associations]
symbol:mRpL32 "mitochondrial ribosomal protein L32"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] EMBL:AE014297 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 CTD:64983 eggNOG:NOG297873
GeneTree:ENSGT00390000014996 EMBL:AY118962 RefSeq:NP_524606.1
UniGene:Dm.20638 ProteinModelPortal:Q9V9Z1 SMR:Q9V9Z1
DIP:DIP-20496N MINT:MINT-869601 STRING:Q9V9Z1 PaxDb:Q9V9Z1
PRIDE:Q9V9Z1 EnsemblMetazoa:FBtr0085759 GeneID:43698
KEGG:dme:Dmel_CG12220 FlyBase:FBgn0039835 InParanoid:Q9V9Z1
OMA:PKHRRSV OrthoDB:EOG41ZCSZ PhylomeDB:Q9V9Z1 GenomeRNAi:43698
NextBio:835311 Bgee:Q9V9Z1 GermOnline:CG12220 Uniprot:Q9V9Z1
Length = 195
Score = 221 (82.9 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 50/119 (42%), Positives = 74/119 (62%)
Query: 241 KVMYP-YGLTTNLEKDKYQSCDIVIQRNCIYNTILFLFTGNCYAKIKEETTRLQDKIVEA 299
K YP Y EK +SC +Q C ++ + + CY K+ +ET +Q KI E
Sbjct: 75 KFGYPEYNWKPLREKRNLRSC---LQ--CGHDHEMGVLCPFCYQKVLKETELMQSKIQET 129
Query: 300 LGLNPVDKEVVVLYKGEKEHASEEFSETHRVIEVEGERPPWFSKNLLQKTTQKPSDSTD 358
LGL+PVDKEV+VLY+GEK S + + R++E++ RP WF+KNLLQK+TQ+ S++ +
Sbjct: 130 LGLDPVDKEVIVLYEGEKAEQSTDDLKNKRIVEMKKPRPMWFTKNLLQKSTQQLSETKE 188
Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 153 TPKPVTKLSLKELFDTSILWAVPKKRRSLERRMNRKYGSKDQVWKMLMPRTDLTVCNTCG 212
+PK + SLK+L +LWAVPK RRS+E+R+ RK+G + WK L + +L C CG
Sbjct: 40 SPKSSQEFSLKQLIGDGLLWAVPKHRRSVEKRLKRKFGYPEYNWKPLREKRNLRSCLQCG 99
Query: 213 YTHHSKTLC 221
+ H LC
Sbjct: 100 HDHEMGVLC 108
Score = 64 (27.6 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 74 TPKPVTKLSLKELFDTSILWAVPK 97
+PK + SLK+L +LWAVPK
Sbjct: 40 SPKSSQEFSLKQLIGDGLLWAVPK 63
>UNIPROTKB|F1NAM9 [details] [associations]
symbol:MRPL32 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002677
Pfam:PF01783 HAMAP:MF_00340 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 TIGRFAMs:TIGR01031 GeneTree:ENSGT00390000014996
OMA:VPPWPAA EMBL:AADN02001460 IPI:IPI00596910
Ensembl:ENSGALT00000020160 Uniprot:F1NAM9
Length = 188
Score = 114 (45.2 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 279 GNCYAKIKEETTRLQDKIVEALG--LNPVDKEVVVLYKGEKEHASEEFSETHRVIEVEGE 336
G CYAK+K ET +++ +I + G N E VVLY GEK E E R+IE +
Sbjct: 124 GYCYAKVKAETQQIRREISKKEGGAFNAPTVESVVLYDGEKP---TEKDEGKRIIERARK 180
Query: 337 RPPWFSKN 344
RP WF +N
Sbjct: 181 RPSWFIRN 188
Score = 85 (35.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 170 ILW-AVPKKRRSLE-RRMNRKYGSKDQVWKMLMP-RTDLTVCNTCGYTHHSKTLCGKYYS 226
+LW A PKKRRS+E R R+ SK L+P + ++ VC CG LCG Y+
Sbjct: 75 VLWMAAPKKRRSIEVNRCRRRNPSK------LIPVKRNIDVCPECGNLKLKHVLCGYCYA 128
>UNIPROTKB|I3LTC4 [details] [associations]
symbol:MRPL32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002677
Pfam:PF01783 HAMAP:MF_00340 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 TIGRFAMs:TIGR01031 GeneTree:ENSGT00390000014996
OMA:VPPWPAA EMBL:FP565568 RefSeq:XP_003360256.1 UniGene:Ssc.23474
Ensembl:ENSSSCT00000029923 GeneID:396626 KEGG:ssc:396626
Uniprot:I3LTC4
Length = 188
Score = 105 (42.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 276 LFTGNCYAKIKEETTRLQDKIVEALG--LNPVDKEVVVLYKGEKEHASEEFSETHRVIEV 333
+ G CY K+++ET ++ ++ + G E VVLY GE SE+ + R+IE
Sbjct: 121 ILCGYCYEKVRKETAEIRRQMGKQEGGPFRAPTTETVVLYSGETP--SEQ-DQGKRIIER 177
Query: 334 EGERPPWFSKN 344
E +RP WF++N
Sbjct: 178 ERKRPSWFTQN 188
Score = 91 (37.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 161 SLKELFDTSILW-AVPKKRRSLERRMNRKYGSKDQVWKMLMPRTDLTVCNTCGYTHHSKT 219
++ L D S+ W A PK RRS+E +NR Q K++ + ++ VC CG+
Sbjct: 67 AISSLLD-SVFWMAAPKNRRSIE--VNRCRRRNPQ--KLIKVKNNIDVCPECGHLKQKHI 121
Query: 220 LCGKYY 225
LCG Y
Sbjct: 122 LCGYCY 127
>MGI|MGI:2137226 [details] [associations]
symbol:Mrpl32 "mitochondrial ribosomal protein L32"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISO] [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002677 Pfam:PF01783 MGI:MGI:2137226 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 CTD:64983
eggNOG:NOG297873 GeneTree:ENSGT00390000014996 HOGENOM:HOG000252980
HOVERGEN:HBG036112 OMA:VPPWPAA OrthoDB:EOG4NS3CW EMBL:AB049650
EMBL:AK002753 EMBL:AF279255 EMBL:BC052214 IPI:IPI00120955
RefSeq:NP_083547.1 UniGene:Mm.36511 ProteinModelPortal:Q9DCI9
SMR:Q9DCI9 STRING:Q9DCI9 PhosphoSite:Q9DCI9 PaxDb:Q9DCI9
PRIDE:Q9DCI9 Ensembl:ENSMUST00000015816 GeneID:75398 KEGG:mmu:75398
UCSC:uc007pnj.1 InParanoid:Q9DCI9 ChiTaRS:MRPL32 NextBio:342908
Bgee:Q9DCI9 CleanEx:MM_MRPL32 Genevestigator:Q9DCI9
GermOnline:ENSMUSG00000015672 Uniprot:Q9DCI9
Length = 187
Score = 108 (43.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 279 GNCYAKIKEETTRLQDKIVEALG--LNPVDKEVVVLYKGEKEHASEEFSETHRVIEVEGE 336
G CY K+++ETT+++ +I G E +VLY GEK SE+ + R++E +
Sbjct: 123 GYCYEKVRQETTKIRQQIGAQEGGPFRAPSVETMVLYTGEKP--SEK-DQGKRIVERNIK 179
Query: 337 RPPWFSKN 344
RP WF++N
Sbjct: 180 RPSWFTQN 187
Score = 86 (35.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 147 QISSVLTPKPVTKLSLKE--LFDTSILW-AVPKKRRSLERRMNRKYGSKDQVWKMLMPRT 203
Q S+LT KE F SI W A PK RR++E +NR Q K++ +
Sbjct: 49 QRPSILTELAHDTCENKENSSFLDSIFWMAAPKNRRTIE--VNRCRRRNPQ--KLIKIKN 104
Query: 204 DLTVCNTCGYTHHSKTLCGKYY 225
++ +C CG+ LCG Y
Sbjct: 105 NIDICPECGHLKQKHVLCGYCY 126
>RGD|1310541 [details] [associations]
symbol:Mrpl32 "mitochondrial ribosomal protein L32"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002677
Pfam:PF01783 RGD:1310541 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
CTD:64983 GeneTree:ENSGT00390000014996 OMA:VPPWPAA
OrthoDB:EOG4NS3CW EMBL:CH474030 IPI:IPI00870189
RefSeq:NP_001099586.1 UniGene:Rn.13489 Ensembl:ENSRNOT00000021433
GeneID:291206 KEGG:rno:291206 UCSC:RGD:1310541 NextBio:632261
Uniprot:D4AEG6
Length = 187
Score = 108 (43.1 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 279 GNCYAKIKEETTRLQDKIVEALG--LNPVDKEVVVLYKGEKEHASEEFSETHRVIEVEGE 336
G CY K+ +ETT+++ +I G E VVLY GEK SE+ + R++E +
Sbjct: 123 GYCYEKVSQETTKIRQQIWAQEGGPFKAPSIETVVLYTGEKP--SEK-DQGKRIVERNIK 179
Query: 337 RPPWFSKN 344
RP WF++N
Sbjct: 180 RPSWFTQN 187
Score = 82 (33.9 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 150 SVLTPKPVTKLSL-----KE--LFDTSILW-AVPKKRRSLERRMNRKYGSKDQVWKMLMP 201
+V +P +T+L+ KE F SI W A PK RR++E +NR + K++
Sbjct: 47 AVQSPSTLTELAYDTSKNKENSSFLDSIFWMAAPKNRRTIE--VNRC--RRRNPHKLIKI 102
Query: 202 RTDLTVCNTCGYTHHSKTLCGKYY 225
+ ++ +C CG+ LCG Y
Sbjct: 103 KNNIDICPECGHLKQKHVLCGYCY 126
>UNIPROTKB|Q2TBI6 [details] [associations]
symbol:MRPL32 "39S ribosomal protein L32, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002677 InterPro:IPR011332
Pfam:PF01783 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF57829 TIGRFAMs:TIGR01031 EMBL:BC110139
IPI:IPI00691965 RefSeq:NP_001033768.1 UniGene:Bt.43108
STRING:Q2TBI6 PRIDE:Q2TBI6 Ensembl:ENSBTAT00000001313 GeneID:532842
KEGG:bta:532842 CTD:64983 eggNOG:NOG297873
GeneTree:ENSGT00390000014996 HOGENOM:HOG000252980
HOVERGEN:HBG036112 InParanoid:Q2TBI6 OMA:VPPWPAA OrthoDB:EOG4NS3CW
NextBio:20875819 Uniprot:Q2TBI6
Length = 188
Score = 107 (42.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 279 GNCYAKIKEETTRLQDKIVEALG--LNPVDKEVVVLYKGEKEHASEEFSETHRVIEVEGE 336
G CY K+++ET ++ +I + G E VVLY GE E + R+IE E +
Sbjct: 124 GYCYEKVRKETAEIRRQIGKQEGGPFKAPTVETVVLYSGE---TPSEHDQGKRIIERERK 180
Query: 337 RPPWFSKN 344
RP WF++N
Sbjct: 181 RPSWFTQN 188
Score = 81 (33.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 165 LFDTSILW-AVPKKRRSLERRMNRKYGSKDQVWKMLMPRTDLTVCNTCGYTHHSKTLCGK 223
L D SI W A PK RRS+E +NR + K++ + ++ C CG+ LCG
Sbjct: 71 LLD-SIFWMAAPKNRRSIE--VNRC--RRRNPHKLIKVKNNIDFCPECGHLKQKHVLCGY 125
Query: 224 YY 225
Y
Sbjct: 126 CY 127
>UNIPROTKB|Q9BYC8 [details] [associations]
symbol:MRPL32 "39S ribosomal protein L32, mitochondrial"
species:9606 "Homo sapiens" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0005761 "mitochondrial ribosome" evidence=NAS]
[GO:0006412 "translation" evidence=NAS] InterPro:IPR002677
Pfam:PF01783 EMBL:AB049649 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 GO:GO:0015934 CleanEx:HS_MRPL32 CTD:64983
eggNOG:NOG297873 HOGENOM:HOG000252980 HOVERGEN:HBG036112
OMA:VPPWPAA OrthoDB:EOG4NS3CW EMBL:BC013147 EMBL:AF161401
EMBL:AB051343 IPI:IPI00011077 RefSeq:NP_114109.1 UniGene:Hs.50252
ProteinModelPortal:Q9BYC8 SMR:Q9BYC8 STRING:Q9BYC8
PhosphoSite:Q9BYC8 DMDM:22001923 PaxDb:Q9BYC8 PRIDE:Q9BYC8
DNASU:64983 Ensembl:ENST00000223324 GeneID:64983 KEGG:hsa:64983
UCSC:uc003tia.3 GeneCards:GC07P042971 HGNC:HGNC:14035 HPA:HPA048965
MIM:611839 neXtProt:NX_Q9BYC8 PharmGKB:PA30963 InParanoid:Q9BYC8
PhylomeDB:Q9BYC8 GenomeRNAi:64983 NextBio:67176 ArrayExpress:Q9BYC8
Bgee:Q9BYC8 Genevestigator:Q9BYC8 GermOnline:ENSG00000106591
Uniprot:Q9BYC8
Length = 188
Score = 92 (37.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 281 CYAKIKEETTRLQDKIVEALGLNPVDK---EVVVLYKGEKEHASEEFSETHRVIEVEGER 337
CY K+ +ET ++ +I + G P E VVLY GE SE+ + R+IE + +R
Sbjct: 126 CYEKVCKETAEIRRQIGKQEG-GPFKAPTIETVVLYTGETP--SEQ-DQGKRIIERDRKR 181
Query: 338 PPWFSKN 344
P WF++N
Sbjct: 182 PSWFTQN 188
Score = 81 (33.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 165 LFDTSILW-AVPKKRRSLERRMNRKYGSKDQVWKMLMPRTDLTVCNTCGYTHHSKTLCGK 223
L D SI W A PK RR++E +NR Q K++ + ++ VC CG+ LC
Sbjct: 71 LLD-SIFWMAAPKNRRTIE--VNRCRRRNPQ--KLIKVKNNIDVCPECGHLKQKHVLCAY 125
Query: 224 YY 225
Y
Sbjct: 126 CY 127
>WB|WBGene00016249 [details] [associations]
symbol:mrpl-32 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR002677 Pfam:PF01783 GO:GO:0005739 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0006412
GO:GO:0040035 GO:GO:0003735 GO:GO:0015934 EMBL:FO080722
TIGRFAMs:TIGR01031 eggNOG:NOG297873 GeneTree:ENSGT00390000014996
PIR:S44782 RefSeq:NP_498870.1 ProteinModelPortal:Q04907 SMR:Q04907
STRING:Q04907 PaxDb:Q04907 EnsemblMetazoa:C30C11.1 GeneID:176197
KEGG:cel:CELE_C30C11.1 UCSC:C30C11.1 CTD:176197 WormBase:C30C11.1
HOGENOM:HOG000021395 InParanoid:Q04907 OMA:HPSDTIC NextBio:891540
Uniprot:Q04907
Length = 168
Score = 111 (44.1 bits), Expect = 0.00013, P = 0.00013
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 281 CYAKIKEETTRLQDKIVEALGLNPV-----DKEVVVLYKGEKEHASEEFSETHRVIEVEG 335
CYAK+ + T+ ++ K+++ NP DKEV V ++GE + A + RV+E+E
Sbjct: 100 CYAKVHQLTSEIKKKMMQ---YNPYVGEKQDKEVYVKFRGEPD-APAAVVKGKRVLEIEK 155
Query: 336 ERPPWFSKNLLQK 348
ERP WF K L++
Sbjct: 156 ERPTWFKKLTLKE 168
Score = 107 (42.7 bits), Expect = 0.00047, P = 0.00047
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 149 SSVLTPKPVTKLSLKELFDT-SILWAVPKKRRSLERRMNRKYGSKDQVWKMLMPRTDLTV 207
SS P+T S++E+ D SI++ VPK R S +++ RK+ ++L P +L
Sbjct: 28 SSTAQNLPMTYGSVREMIDDFSIVFGVPKYRTSKPKKVTRKFSFT----RLLQPIDNLVT 83
Query: 208 CNTCGYTHHSKTLCGKYYSLSISRVKCSFPSLLKVMYPYGLTTNLEKDKY 257
C C H S T+C Y+ + ++ + PY + +K+ Y
Sbjct: 84 CPACSNIHPSDTICDACYA-KVHQLTSEIKKKMMQYNPY-VGEKQDKEVY 131
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 358 358 0.00081 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 611 (65 KB)
Total size of DFA: 248 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.16u 0.18s 31.34t Elapsed: 00:00:01
Total cpu time: 31.16u 0.18s 31.34t Elapsed: 00:00:01
Start: Thu Aug 15 14:23:19 2013 End: Thu Aug 15 14:23:20 2013