Query         psy16044
Match_columns 436
No_of_seqs    347 out of 2625
Neff          9.8 
Searched_HMMs 29240
Date          Fri Aug 16 19:26:32 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy16044.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16044hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4f4o_C Haptoglobin; globin fol 100.0 3.6E-51 1.2E-55  388.8  20.1  260   11-432    87-347 (347)
  2 2vnt_A Urokinase-type plasmino 100.0 9.7E-50 3.3E-54  370.4  26.9  257    8-432     7-271 (276)
  3 1t8o_A Chymotrypsin A; chymotr 100.0 2.9E-49 9.9E-54  360.1  27.5  239   14-431     1-244 (245)
  4 2bdy_A Thrombin; thrombin, com 100.0 1.6E-49 5.6E-54  370.6  21.8  249   24-432    28-287 (289)
  5 1bru_P Elastase, PPE; serine p 100.0 1.6E-48 5.5E-53  354.4  27.2  235   27-432     1-241 (241)
  6 1ddj_A Plasminogen; catalytic  100.0 2.2E-48 7.4E-53  354.9  27.2  244   12-431     2-246 (247)
  7 1pyt_D TC, PCPA-TC, chymotryps 100.0 9.8E-49 3.4E-53  358.0  23.9  242   14-268     1-249 (251)
  8 2jde_A Urokinase-type plasmino 100.0 4.4E-49 1.5E-53  365.8  21.9  256    5-270     4-270 (276)
  9 2olg_A Pro-phenoloxidase activ 100.0 2.6E-48 8.9E-53  360.8  25.6  251    7-268     7-276 (278)
 10 1aut_C Activated protein C; se 100.0 3.3E-48 1.1E-52  354.3  25.6  236   27-432     1-241 (250)
 11 2b9l_A Prophenoloxidase activa 100.0   7E-48 2.4E-52  372.1  26.2  257   11-432   115-385 (394)
 12 1fiw_A Beta-acrosin heavy chai 100.0 3.2E-48 1.1E-52  361.4  23.1  238   27-269     1-249 (290)
 13 2oq5_A Transmembrane protease, 100.0 9.3E-48 3.2E-52  347.5  23.5  226   27-268     1-230 (232)
 14 3bg8_A Coagulation factor XIA  100.0 3.5E-48 1.2E-52  351.6  20.3  232   27-269     1-236 (238)
 15 1fxy_A Coagulation factor XA-t 100.0 1.5E-47 5.1E-52  345.0  24.0  224   27-432     1-227 (228)
 16 2f91_A Hepatopancreas trypsin; 100.0 9.5E-48 3.2E-52  348.5  22.7  232   27-268     1-236 (237)
 17 1yc0_A Hepatocyte growth facto 100.0 1.5E-47 5.2E-52  356.3  24.5  246   11-270    19-275 (283)
 18 3ncl_A Suppressor of tumorigen 100.0   2E-47 6.8E-52  347.7  24.6  233   27-268     1-239 (241)
 19 1hj8_A Trypsin I; hydrolase, r 100.0   3E-47   1E-51  341.5  24.6  219   27-431     1-221 (222)
 20 2any_A Kininogenin, plasma kal 100.0 1.1E-47 3.8E-52  349.0  21.8  233   27-270     1-237 (241)
 21 4dgj_A Enteropeptidase catalyt 100.0 2.2E-47 7.5E-52  346.0  22.8  229   27-268     1-234 (235)
 22 1ym0_A Fibrinotic enzyme compo 100.0 1.4E-47 4.7E-52  348.0  21.3  230   27-269     1-236 (238)
 23 1lo6_A Kallikrein 6, HK6; seri 100.0   5E-47 1.7E-51  340.3  24.6  219   27-431     1-222 (223)
 24 3mfj_A Cationic trypsin; serin 100.0 5.2E-47 1.8E-51  340.2  24.6  220   27-431     1-222 (223)
 25 1z8g_A Serine protease hepsin; 100.0 2.2E-47 7.4E-52  367.7  23.6  244   12-271   106-362 (372)
 26 1rtf_B (TC)-T-PA, two chain ti 100.0 3.1E-47 1.1E-51  348.6  23.5  235   27-268     1-250 (252)
 27 1md8_A C1R complement serine p 100.0 2.5E-48 8.5E-53  368.1  16.1  244   12-268    75-327 (329)
 28 2bz6_H Blood coagulation facto 100.0 1.3E-47 4.4E-52  351.5  19.5  232   27-270     1-241 (254)
 29 2zch_P Prostate-specific antig 100.0 9.7E-47 3.3E-51  342.0  24.6  221   27-432     1-236 (237)
 30 3gyl_B Prostasin; ENAC, zymoge 100.0 5.3E-47 1.8E-51  349.1  22.7  230   27-269     1-242 (261)
 31 1spj_A Kallikrein 1; serine pr 100.0 1.5E-46 5.2E-51  341.0  25.2  222   27-432     1-237 (238)
 32 1gvk_B Elastase 1, peptide inh 100.0 7.8E-47 2.7E-51  343.2  23.1  229   27-268     1-237 (240)
 33 1ao5_A Glandular kallikrein-13 100.0 1.1E-46 3.9E-51  341.5  24.1  221   27-432     1-236 (237)
 34 2asu_B Hepatocyte growth facto 100.0 2.4E-46 8.1E-51  338.6  26.0  229   27-435     1-231 (234)
 35 3gov_B MAsp-1; complement, ser 100.0 1.4E-46 4.8E-51  344.2  24.4  233   27-269     1-248 (251)
 36 2psx_A Kallikrein-5; zinc inhi 100.0 1.9E-46 6.6E-51  337.5  24.8  221   27-432     1-226 (227)
 37 2jkh_A Activated factor XA hea 100.0 3.4E-47 1.2E-51  345.9  19.6  228   27-270     1-234 (241)
 38 1mza_A Pro-granzyme K; apoptos 100.0 8.2E-47 2.8E-51  343.1  22.0  227   25-270     1-236 (240)
 39 2r0l_A Hepatocyte growth facto 100.0 1.7E-46 5.8E-51  342.9  23.4  230   27-270     1-240 (248)
 40 4i8h_A Cationic trypsin, beta- 100.0 3.4E-46 1.2E-50  335.3  25.0  219   27-431     1-222 (223)
 41 3mhw_U Urokinase-type plasmino 100.0 1.2E-46   4E-51  343.9  22.2  235   27-269     1-246 (247)
 42 2wph_S Coagulation factor IXA  100.0 3.2E-47 1.1E-51  344.8  18.2  226   27-269     1-233 (235)
 43 2f9n_A Alpha I tryptase; serin 100.0 1.3E-46 4.3E-51  343.0  21.4  229   27-269     1-242 (245)
 44 3fzz_A Granzyme C; hydrolase,  100.0   2E-46 6.9E-51  337.8  22.4  224   27-269     1-226 (227)
 45 1m9u_A Earthworm fibrinolytic  100.0 1.7E-46 5.7E-51  341.4  22.1  228   27-267     1-240 (241)
 46 2zgc_A Granzyme M; serine prot 100.0 1.6E-46 5.3E-51  340.8  21.6  223   27-271     1-231 (240)
 47 1sgf_A 7S NGF, nerve growth fa 100.0 8.6E-47 2.9E-51  342.9  19.7  223   25-432     2-239 (240)
 48 3nxp_A Prethrombin-1; alloster 100.0 2.5E-47 8.4E-52  373.4  16.8  249   24-432   163-422 (424)
 49 3rm2_H Thrombin heavy chain; s 100.0 3.1E-46   1E-50  343.6  22.4  246   27-432     1-257 (259)
 50 1gvz_A Kallikrein-1E2; antigen 100.0 1.5E-46 5.2E-51  340.7  20.0  221   27-432     1-236 (237)
 51 1cgh_A Cathepsin G; inflammati 100.0 3.7E-46 1.3E-50  335.0  21.6  220   27-268     1-222 (224)
 52 1orf_A Granzyme A; hydrolase-h 100.0 3.9E-46 1.3E-50  337.2  21.9  223   27-270     1-232 (234)
 53 2qxi_A Kallikrein-7; S1 pocket 100.0   8E-46 2.7E-50  332.7  23.6  220   27-432     1-223 (224)
 54 1ton_A Tonin; hydrolase(serine 100.0 1.2E-45 4.1E-50  334.4  24.7  219   27-432     1-234 (235)
 55 1elt_A Elastase; serine protei 100.0 4.1E-46 1.4E-50  337.7  21.7  227   27-267     1-235 (236)
 56 2qy0_B Complement C1R subcompo 100.0 5.4E-47 1.9E-51  344.9  15.4  230   27-269     1-239 (242)
 57 1elv_A Complement C1S componen 100.0 9.6E-47 3.3E-51  358.9  17.5  236   12-269    68-325 (333)
 58 1iau_A Granzyme B; hydrolase-h 100.0 6.6E-46 2.3E-50  334.2  21.7  223   27-269     1-225 (227)
 59 2xxl_A GRAM-positive specific  100.0 2.6E-46 8.8E-51  362.8  20.2  239   13-269   110-373 (408)
 60 2xw9_A Complement factor D; im 100.0 4.8E-46 1.6E-50  335.5  20.6  222   27-268     1-227 (228)
 61 1pq7_A Trypsin; ultra-high res 100.0 7.9E-46 2.7E-50  332.9  20.0  219   27-267     1-223 (224)
 62 2bdg_A Kallikrein-4; serine pr 100.0 1.9E-45 6.3E-50  330.1  21.9  215   27-268     1-221 (223)
 63 4ag1_A Chymase; hydrolase-de n 100.0 1.7E-45 5.8E-50  331.5  21.5  221   27-268     1-223 (226)
 64 1eq9_A Chymotrypsin; FIRE ANT, 100.0 1.2E-45 4.1E-50  331.2  20.3  217   27-269     1-221 (222)
 65 1gpz_A Complement C1R componen 100.0 1.4E-46 4.8E-51  367.0  15.4  246   12-270   143-397 (399)
 66 1euf_A Duodenase; serine prote 100.0 3.4E-45 1.2E-49  329.4  22.9  222   27-269     1-224 (227)
 67 1si5_H Scatter factor, hepatoc 100.0   3E-45   1E-49  332.7  22.7  224   27-270     1-228 (240)
 68 3rp2_A RAT MAST cell protease  100.0 1.3E-45 4.4E-50  331.9  20.0  221   27-268     1-223 (224)
 69 1npm_A Neuropsin; serine prote 100.0 1.4E-45 4.7E-50  331.5  20.1  215   27-268     1-224 (225)
 70 1zjk_A Mannan-binding lectin s 100.0 1.2E-45   4E-50  360.7  21.3  241   12-269   149-401 (403)
 71 3tvj_B Mannan-binding lectin s 100.0 1.6E-45 5.6E-50  335.3  20.8  227   27-268     1-239 (242)
 72 1fon_A Procarboxypeptidase A-S 100.0 4.2E-46 1.4E-50  338.5  16.2  227   29-268     1-237 (240)
 73 1azz_A Collagenase; complex (s 100.0 1.9E-45 6.4E-50  330.8  18.6  217   27-269     1-223 (226)
 74 4e7n_A Snake-venom thrombin-li 100.0 2.5E-44 8.5E-49  326.6  25.6  227   27-434     1-233 (238)
 75 2xrc_A Human complement factor 100.0   2E-45 6.7E-50  371.4  18.6  248   10-432   305-558 (565)
 76 2f83_A Coagulation factor XI;  100.0   3E-45   1E-49  374.3  19.4  242   12-269   378-623 (625)
 77 3s9c_A Vipera russelli protein 100.0 3.7E-44 1.3E-48  324.6  24.5  223   27-432     1-227 (234)
 78 4dur_A Plasminogen, serine pro 100.0 3.9E-44 1.3E-48  370.8  27.1  246   11-432   545-791 (791)
 79 1a7s_A Heparin binding protein 100.0 1.2E-44 4.1E-49  325.6  19.5  216   27-271     1-220 (225)
 80 3beu_A Trypsin, SGT; beta shee 100.0 1.3E-44 4.6E-49  325.2  19.3  218   27-269     1-222 (224)
 81 3h7t_A Group 3 allergen smipp- 100.0 1.5E-44   5E-49  327.5  18.5  221   27-270     1-230 (235)
 82 2z7f_E Leukocyte elastase; ser 100.0 1.4E-44 4.9E-49  323.4  18.1  212   27-268     1-217 (218)
 83 2aiq_A Protein C activator; sn 100.0 3.3E-44 1.1E-48  323.9  20.0  216   27-270     1-223 (231)
 84 3s69_A Thrombin-like enzyme de 100.0 9.4E-44 3.2E-48  321.9  20.8  219   27-270     1-226 (234)
 85 3f1s_B Vitamin K-dependent pro 100.0 6.1E-44 2.1E-48  331.5  16.3  216   30-270    56-277 (283)
 86 2hlc_A Collagenase; serine pro 100.0 1.9E-43 6.5E-48  318.8  18.7  222   27-270     1-228 (230)
 87 1fuj_A PR3, myeloblastin; hydr 100.0 5.8E-43   2E-47  313.8  20.7  215   27-268     1-220 (221)
 88 3h7o_A Group 3 allergen smipp- 100.0 4.3E-43 1.5E-47  316.3  17.6  222   28-270     1-227 (228)
 89 3h5c_B Vitamin K-dependent pro 100.0 8.6E-42   3E-46  322.7  17.7  214   30-268    97-316 (317)
 90 2odp_A Complement C2; C3/C5 co 100.0 5.5E-40 1.9E-44  330.8  11.8  235   10-270   216-502 (509)
 91 1rrk_A Complement factor B; BB 100.0 1.4E-39 4.8E-44  327.1  13.7  236   10-270   207-491 (497)
 92 3hrz_D Complement factor B; se 100.0 1.3E-36 4.5E-41  319.9  14.5  227   29-271   459-734 (741)
 93 1p3c_A Glutamyl-endopeptidase; 100.0   5E-36 1.7E-40  267.4   2.9  202   23-268     7-213 (215)
 94 2pka_B Kallikrein A; serine pr 100.0 1.9E-32 6.4E-37  229.9  13.9  144  278-432     4-151 (152)
 95 2oq5_A Transmembrane protease, 100.0 5.4E-32 1.8E-36  244.2  17.3  158  271-430    74-231 (232)
 96 1yph_C Chymotrypsin A, chain B 100.0 6.9E-32 2.4E-36  220.5  15.6  128   27-169     1-130 (131)
 97 1fiw_A Beta-acrosin heavy chai 100.0 6.7E-32 2.3E-36  251.2  17.4  161  271-432    89-251 (290)
 98 3ncl_A Suppressor of tumorigen 100.0 8.5E-32 2.9E-36  244.4  17.1  156  271-430    85-240 (241)
 99 4dgj_A Enteropeptidase catalyt 100.0   1E-31 3.4E-36  243.0  16.5  156  271-430    80-235 (235)
100 3bg8_A Coagulation factor XIA  100.0 8.1E-32 2.8E-36  243.9  15.4  157  271-431    81-237 (238)
101 2any_A Kininogenin, plasma kal 100.0 2.4E-31   8E-36  241.4  17.6  158  271-432    81-238 (241)
102 2f91_A Hepatopancreas trypsin; 100.0 1.3E-31 4.5E-36  242.3  15.0  153  271-429    84-236 (237)
103 2olg_A Pro-phenoloxidase activ 100.0 3.1E-31 1.1E-35  245.8  16.6  156  271-430   119-277 (278)
104 1ym0_A Fibrinotic enzyme compo 100.0 3.1E-31   1E-35  240.3  15.7  157  271-432    79-238 (238)
105 1z8g_A Serine protease hepsin; 100.0 6.7E-31 2.3E-35  252.7  18.2  162  271-434   194-364 (372)
106 1rtf_B (TC)-T-PA, two chain ti 100.0 1.2E-30 3.9E-35  238.6  17.7  157  271-430    84-251 (252)
107 2f9n_A Alpha I tryptase; serin 100.0 3.6E-31 1.2E-35  240.8  14.2  157  271-432    79-244 (245)
108 1pyt_D TC, PCPA-TC, chymotryps 100.0 7.2E-31 2.5E-35  239.6  16.0  156  271-430    93-250 (251)
109 2jkh_A Activated factor XA hea 100.0 4.2E-31 1.4E-35  239.7  13.8  158  271-432    76-235 (241)
110 1gvk_B Elastase 1, peptide inh 100.0 1.2E-30 3.9E-35  236.6  16.4  157  271-431    79-239 (240)
111 2zgc_A Granzyme M; serine prot 100.0 9.4E-31 3.2E-35  237.0  15.5  157  271-434    73-233 (240)
112 1fon_A Procarboxypeptidase A-S 100.0 1.1E-30 3.7E-35  236.8  15.9  157  271-431    79-239 (240)
113 3gov_B MAsp-1; complement, ser 100.0   2E-30 6.8E-35  236.9  17.4  156  271-431    92-249 (251)
114 3gyl_B Prostasin; ENAC, zymoge 100.0 1.4E-30 4.8E-35  239.3  16.5  160  271-433    78-245 (261)
115 2r0l_A Hepatocyte growth facto 100.0 2.5E-30 8.6E-35  235.7  17.6  159  271-432    77-241 (248)
116 2wph_S Coagulation factor IXA  100.0 4.1E-31 1.4E-35  238.9  11.3  157  271-431    75-234 (235)
117 2bz6_H Blood coagulation facto 100.0   1E-30 3.5E-35  239.1  13.1  161  271-433    78-243 (254)
118 3tvj_B Mannan-binding lectin s 100.0 2.5E-30 8.5E-35  234.9  15.5  159  271-431    75-241 (242)
119 3mhw_U Urokinase-type plasmino 100.0 3.4E-30 1.2E-34  234.7  16.4  158  271-431    83-247 (247)
120 1yc0_A Hepatocyte growth facto 100.0 3.5E-30 1.2E-34  239.2  16.8  159  271-432   112-276 (283)
121 2jde_A Urokinase-type plasmino 100.0 3.1E-30 1.1E-34  238.9  16.2  159  271-432   106-271 (276)
122 3cp7_A Alkaline serine proteas 100.0 2.3E-31   8E-36  236.6   7.9  187   34-254     2-199 (218)
123 1m9u_A Earthworm fibrinolytic  100.0 3.9E-30 1.3E-34  233.4  15.9  155  271-429    79-241 (241)
124 2qy0_B Complement C1R subcompo 100.0 2.2E-30 7.5E-35  235.2  13.4  156  271-432    79-241 (242)
125 2bdg_A Kallikrein-4; serine pr 100.0 6.2E-30 2.1E-34  229.0  14.4  148  271-430    74-222 (223)
126 1elt_A Elastase; serine protei 100.0 1.3E-29 4.3E-34  229.2  16.5  154  271-429    79-236 (236)
127 1md8_A C1R complement serine p 100.0 3.8E-30 1.3E-34  243.4  13.4  155  271-431   168-329 (329)
128 1orf_A Granzyme A; hydrolase-h 100.0 8.4E-30 2.9E-34  230.0  15.0  155  271-432    74-233 (234)
129 1si5_H Scatter factor, hepatoc 100.0 1.7E-29 5.9E-34  228.9  16.6  148  281-432    82-229 (240)
130 1zjk_A Mannan-binding lectin s 100.0 9.5E-30 3.3E-34  248.2  15.8  159  271-431   236-402 (403)
131 1iau_A Granzyme B; hydrolase-h 100.0 9.3E-30 3.2E-34  228.7  14.4  151  271-431    76-226 (227)
132 1mza_A Pro-granzyme K; apoptos 100.0 8.9E-30   3E-34  230.8  13.8  155  271-433    80-238 (240)
133 1euf_A Duodenase; serine prote 100.0 1.5E-29 5.3E-34  227.1  15.0  150  271-431    76-225 (227)
134 1elv_A Complement C1S componen 100.0   2E-29 6.9E-34  239.5  15.2  157  271-433   155-328 (333)
135 1eq9_A Chymotrypsin; FIRE ANT, 100.0 2.1E-29 7.1E-34  225.5  13.9  147  271-431    75-222 (222)
136 3beu_A Trypsin, SGT; beta shee 100.0 2.8E-29 9.7E-34  225.1  14.5  152  271-431    72-223 (224)
137 3fzz_A Granzyme C; hydrolase,  100.0 3.1E-29 1.1E-33  225.4  14.5  151  271-431    77-227 (227)
138 2aiq_A Protein C activator; sn 100.0 3.9E-29 1.3E-33  225.1  14.4  153  270-434    72-226 (231)
139 1pq7_A Trypsin; ultra-high res 100.0 5.9E-29   2E-33  222.9  15.0  150  271-429    74-224 (224)
140 2xxl_A GRAM-positive specific  100.0   2E-29 6.7E-34  244.4  12.7  157  271-432   211-375 (408)
141 1cgh_A Cathepsin G; inflammati 100.0 6.5E-29 2.2E-33  222.6  14.9  148  271-430    76-223 (224)
142 1npm_A Neuropsin; serine prote 100.0 2.7E-29 9.3E-34  225.2  12.4  148  271-430    73-225 (225)
143 3s69_A Thrombin-like enzyme de 100.0 7.2E-29 2.5E-33  224.1  14.8  153  271-433    74-228 (234)
144 2xw9_A Complement factor D; im 100.0 4.3E-29 1.5E-33  224.5  13.0  151  271-430    77-228 (228)
145 3f1s_B Vitamin K-dependent pro 100.0 1.7E-29 5.7E-34  234.4  10.3  154  271-434   125-280 (283)
146 4ag1_A Chymase; hydrolase-de n 100.0 9.1E-29 3.1E-33  222.1  14.3  150  271-432    77-226 (226)
147 3h7t_A Group 3 allergen smipp- 100.0 8.2E-29 2.8E-33  223.9  13.9  154  272-433    75-232 (235)
148 2f83_A Coagulation factor XI;  100.0 4.7E-29 1.6E-33  254.8  11.9  157  271-431   468-624 (625)
149 1gpz_A Complement C1R componen 100.0 7.4E-29 2.5E-33  241.7  11.6  156  271-432   236-398 (399)
150 1azz_A Collagenase; complex (s 100.0 2.1E-28 7.3E-33  219.5  13.5  147  271-431    75-224 (226)
151 3rp2_A RAT MAST cell protease  100.0 1.8E-28   6E-33  220.0  12.7  148  271-430    77-224 (224)
152 3h7o_A Group 3 allergen smipp- 100.0 2.5E-28 8.4E-33  219.6  13.5  148  274-431    80-227 (228)
153 2hlc_A Collagenase; serine pro  99.9 1.6E-27 5.4E-32  214.6  14.3  151  271-432    76-229 (230)
154 3h5c_B Vitamin K-dependent pro  99.9 9.9E-28 3.4E-32  226.4  11.9  150  271-430   166-317 (317)
155 2z7f_E Leukocyte elastase; ser  99.9 3.4E-27 1.2E-31  210.5  14.7  139  272-430    78-218 (218)
156 1a7s_A Heparin binding protein  99.9 4.4E-27 1.5E-31  210.9  14.8  141  272-432    79-220 (225)
157 2pka_B Kallikrein A; serine pr  99.9 3.3E-27 1.1E-31  197.8  10.9  139  120-269     5-149 (152)
158 1fuj_A PR3, myeloblastin; hydr  99.9 2.8E-26 9.6E-31  205.1  14.9  139  274-430    82-221 (221)
159 1wcz_A Glutamyl endopeptidase;  99.9   1E-26 3.6E-31  213.2  11.0  198   33-269    12-211 (268)
160 2o8l_A V8 protease, taphylococ  99.9 2.2E-26 7.6E-31  211.7  12.8  198   33-269    12-211 (274)
161 1arb_A Achromobacter protease   99.9 8.1E-27 2.8E-31  212.2   8.6  179   55-265    33-238 (268)
162 1agj_A Epidermolytic toxin A;   99.9 6.2E-26 2.1E-30  205.6  11.7  179   32-248    35-217 (242)
163 1rrk_A Complement factor B; BB  99.9 1.9E-25 6.5E-30  224.2   7.8  160  271-432   288-492 (497)
164 2w7s_A Serine protease SPLA; h  99.9 2.3E-25 7.8E-30  195.9   7.2  185   32-269     7-199 (200)
165 2vid_A Serine protease SPLB; h  99.9 8.4E-25 2.9E-29  193.0  10.5  185   32-269     7-203 (204)
166 1qtf_A Exfoliative toxin B; se  99.9 8.1E-24 2.8E-28  191.9  12.3  177   33-250    29-210 (246)
167 2odp_A Complement C2; C3/C5 co  99.9 3.6E-24 1.2E-28  215.4   8.3  160  271-433   297-504 (509)
168 1yph_E Chymotrypsin A, chain C  99.9 1.1E-23 3.8E-28  161.7   8.9   94  333-431     3-96  (97)
169 2as9_A Serine protease; trypsi  99.9 7.1E-23 2.4E-27  181.1  12.1  165   33-249     9-181 (210)
170 3hrz_D Complement factor B; se  99.9 9.9E-24 3.4E-28  221.9   7.6  161  271-433   530-735 (741)
171 2pka_A Kallikrein A; serine pr  99.9 1.6E-21 5.3E-26  144.2   9.6   79   27-120     1-79  (80)
172 1p3c_A Glutamyl-endopeptidase;  99.9 6.9E-23 2.4E-27  182.2   2.0  131  270-430    83-214 (215)
173 2qa9_E Streptogrisin-B; chymot  99.8 1.3E-21 4.3E-26  169.6   1.3  166   55-267    11-183 (185)
174 1yph_E Chymotrypsin A, chain C  99.7 1.1E-18 3.8E-23  133.7   5.4   90  174-268     3-94  (97)
175 1bru_P Elastase, PPE; serine p  99.7 8.3E-18 2.8E-22  152.0   8.7   93  175-268   142-238 (241)
176 2qa9_E Streptogrisin-B; chymot  99.7 8.4E-19 2.9E-23  151.7   2.0  124  280-429    60-184 (185)
177 3k6y_A Serine protease, possib  99.7   1E-16 3.5E-21  144.2  14.9  166   35-246    38-203 (237)
178 2bdy_A Thrombin; thrombin, com  99.7 1.9E-17 6.4E-22  153.8   9.3   93  175-269   187-285 (289)
179 1t8o_A Chymotrypsin A; chymotr  99.7 1.7E-17 5.7E-22  150.3   7.9   89  175-268   152-242 (245)
180 2sga_A Proteinase A; hydrolase  99.7 2.6E-17   9E-22  141.7   5.6  156   55-264    11-176 (181)
181 1hj8_A Trypsin I; hydrolase, r  99.7 7.8E-17 2.7E-21  143.6   8.0   88  175-269   131-220 (222)
182 1lo6_A Kallikrein 6, HK6; seri  99.7 1.4E-16 4.7E-21  142.2   8.5   88  175-269   131-221 (223)
183 1fxy_A Coagulation factor XA-t  99.7 1.6E-16 5.5E-21  142.2   8.4   87  175-268   136-224 (228)
184 1spj_A Kallikrein 1; serine pr  99.6 1.8E-16 6.3E-21  142.9   8.4  106  157-269   126-235 (238)
185 4e7n_A Snake-venom thrombin-li  99.6 1.9E-16 6.5E-21  142.8   7.9   92  175-271   136-231 (238)
186 2zch_P Prostate-specific antig  99.6 2.2E-16 7.6E-21  142.2   7.9  104  159-269   127-234 (237)
187 3mfj_A Cationic trypsin; serin  99.6 2.8E-16 9.6E-21  140.1   8.2   87  175-268   132-220 (223)
188 1ao5_A Glandular kallikrein-13  99.6 3.4E-16 1.2E-20  141.0   8.6  106  157-269   125-234 (237)
189 2psx_A Kallikrein-5; zinc inhi  99.6 3.3E-16 1.1E-20  140.0   8.4   87  175-269   135-224 (227)
190 1ton_A Tonin; hydrolase(serine  99.6   3E-16   1E-20  141.2   7.8  106  157-269   123-232 (235)
191 3s9c_A Vipera russelli protein  99.6 3.1E-16 1.1E-20  141.0   7.5   90  175-270   134-226 (234)
192 3nxp_A Prethrombin-1; alloster  99.6 2.9E-16 9.9E-21  153.3   7.3   93  175-269   322-420 (424)
193 1l1j_A Heat shock protease HTR  99.6 9.3E-16 3.2E-20  137.4   9.9  148   55-246    55-203 (239)
194 4i8h_A Cationic trypsin, beta-  99.6 5.7E-16 1.9E-20  138.2   8.4   88  175-269   132-221 (223)
195 3tjo_A Serine protease HTRA1;   99.6 4.4E-15 1.5E-19  132.6  14.1  166   36-246    39-209 (231)
196 2qxi_A Kallikrein-7; S1 pocket  99.6 4.9E-16 1.7E-20  138.6   7.6   88  175-269   131-221 (224)
197 1gvz_A Kallikrein-1E2; antigen  99.6 2.6E-16 8.9E-21  141.8   4.9  105  157-268   125-233 (237)
198 1y8t_A Hypothetical protein RV  99.6 9.1E-15 3.1E-19  137.7  14.2  169   36-246    14-189 (324)
199 1sgf_A 7S NGF, nerve growth fa  99.6 3.9E-16 1.3E-20  140.9   4.4   89  174-269   146-237 (240)
200 1arb_A Achromobacter protease   99.6 4.8E-16 1.6E-20  141.2   4.5  119  279-423   109-235 (268)
201 3qo6_A Protease DO-like 1, chl  99.6 1.5E-14   5E-19  137.4  12.0  169   37-249    26-203 (348)
202 1lcy_A HTRA2 serine protease;   99.5   2E-14 6.9E-19  135.1  11.7  164   37-245    24-192 (325)
203 3lgi_A Protease DEGS; stress-s  99.5   8E-14 2.7E-18  125.1  13.7  163   36-246    28-196 (237)
204 3num_A Serine protease HTRA1;   99.5 1.2E-13   4E-18  130.5  14.8  165   37-246    23-192 (332)
205 3cp7_A Alkaline serine proteas  99.5 3.8E-15 1.3E-19  131.9   4.1  130  271-431    78-213 (218)
206 1ddj_A Plasminogen; catalytic   99.5   7E-15 2.4E-19  133.2   5.8   94  175-269   150-245 (247)
207 2vnt_A Urokinase-type plasmino  99.5 1.1E-14 3.8E-19  134.2   6.9  114  156-270   154-270 (276)
208 2asu_B Hepatocyte growth facto  99.5 1.4E-14 4.7E-19  130.1   6.9   92  176-270   134-227 (234)
209 1aut_C Activated protein C; se  99.5   2E-14   7E-19  130.4   7.6   94  174-270   145-240 (250)
210 2w7s_A Serine protease SPLA; h  99.5 1.6E-14 5.5E-19  126.4   5.6  118  281-430    76-199 (200)
211 1te0_A Protease DEGS; two doma  99.5 2.8E-13 9.5E-18  127.1  13.5  162   37-246    18-185 (318)
212 1wcz_A Glutamyl endopeptidase;  99.5 6.8E-14 2.3E-18  127.9   7.2  119  281-431    91-212 (268)
213 2vid_A Serine protease SPLB; h  99.5 3.7E-14 1.3E-18  124.5   5.2  118  281-430    75-203 (204)
214 2o8l_A V8 protease, taphylococ  99.4 1.6E-13 5.5E-18  125.8   9.2  120  281-432    91-213 (274)
215 3rm2_H Thrombin heavy chain; s  99.4   1E-13 3.5E-18  126.4   7.5   93  175-269   157-255 (259)
216 2b9l_A Prophenoloxidase activa  99.4 5.2E-14 1.8E-18  135.6   5.6   92  176-269   282-383 (394)
217 3sti_A Protease DEGQ; serine p  99.4 1.6E-12 5.4E-17  116.6  13.9  144   55-246    62-207 (245)
218 2sga_A Proteinase A; hydrolase  99.4 1.3E-13 4.4E-18  118.5   4.2  121  281-426    53-177 (181)
219 1agj_A Epidermolytic toxin A;   99.4   1E-12 3.5E-17  118.5   7.9  118  280-427   117-238 (242)
220 4dur_A Plasminogen, serine pro  99.3 8.7E-13   3E-17  136.9   5.4   93  175-268   694-788 (791)
221 4f4o_C Haptoglobin; globin fol  99.3 1.7E-11 5.8E-16  116.0  10.4   72  281-356   185-256 (347)
222 2xrc_A Human complement factor  99.2 2.5E-12 8.4E-17  129.8   4.6  106  160-270   449-557 (565)
223 3stj_A Protease DEGQ; serine p  99.2 9.2E-11 3.2E-15  110.7  13.7  145   55-247    62-208 (345)
224 1hpg_A Glutamic acid specific   99.2 5.3E-11 1.8E-15  102.3  10.9  156   55-259    11-177 (187)
225 2as9_A Serine protease; trypsi  99.1 2.2E-10 7.6E-15  100.6   9.2  115  281-426    76-199 (210)
226 2ea3_A Chymotrypsin; celloulom  99.1 6.5E-11 2.2E-15  101.6   5.3  149   55-259    14-171 (189)
227 4a8c_A Periplasmic PH-dependen  99.0 3.6E-09 1.2E-13  103.3  14.0  145   55-247    62-208 (436)
228 1yph_C Chymotrypsin A, chain B  99.0 4.9E-10 1.7E-14   90.5   5.6   56  271-328    75-130 (131)
229 3pv2_A DEGQ; trypsin fold, PDZ  98.9 9.4E-09 3.2E-13  100.5  11.1  147   55-247    76-226 (451)
230 2pfe_A Protease A, alkaline se  98.8 2.8E-09 9.5E-14   91.1   6.0   34  219-257   137-172 (186)
231 1qtf_A Exfoliative toxin B; se  98.8 6.5E-09 2.2E-13   93.6   6.5   93  280-405   111-206 (246)
232 2oua_A Serine protease, protei  98.7 1.8E-08 6.2E-13   86.3   7.5   27  219-250   140-166 (188)
233 1hpg_A Glutamic acid specific   98.7 2.3E-08   8E-13   85.7   7.3  117  281-425    60-182 (187)
234 2ea3_A Chymotrypsin; celloulom  98.7   5E-09 1.7E-13   89.8   2.3  117  281-425    54-176 (189)
235 1ky9_A Protease DO, DEGP, HTRA  98.6 2.1E-07 7.2E-12   90.9  12.7  143   55-245    85-229 (448)
236 3qo6_A Protease DO-like 1, chl  98.6 3.2E-07 1.1E-11   86.8  11.4  128  280-430    98-226 (348)
237 1l1j_A Heat shock protease HTR  98.5 1.5E-07 5.1E-12   84.0   7.6  127  280-429   101-227 (239)
238 3k6y_A Serine protease, possib  98.5 1.6E-07 5.5E-12   83.9   6.7  102  281-405   102-203 (237)
239 3tjo_A Serine protease HTRA1;   98.5 2.2E-07 7.4E-12   82.6   6.9  122  281-430   109-230 (231)
240 2h5c_A Alpha-lytic protease; s  98.4 6.2E-07 2.1E-11   77.3   9.1   27  219-249   140-171 (198)
241 2w5e_A Putative serine proteas  98.3 4.7E-06 1.6E-10   69.3  10.5   79   55-166    20-98  (163)
242 2pfe_A Protease A, alkaline se  98.3 4.1E-07 1.4E-11   77.6   3.5  115  281-423    57-177 (186)
243 1y8t_A Hypothetical protein RV  98.2 5.2E-06 1.8E-10   77.7  10.8  127  280-430    85-222 (324)
244 3lgi_A Protease DEGS; stress-s  98.2 7.8E-06 2.7E-10   72.8  11.0  123  281-430    99-225 (237)
245 1lcy_A HTRA2 serine protease;   98.2 3.8E-06 1.3E-10   78.6   8.3  101  280-404    92-192 (325)
246 1te0_A Protease DEGS; two doma  98.1 2.3E-05 7.8E-10   73.1  11.7  124  280-430    87-214 (318)
247 3num_A Serine protease HTRA1;   98.1   1E-05 3.6E-10   75.9   9.4  121  281-429    92-212 (332)
248 3sti_A Protease DEGQ; serine p  98.0 4.4E-05 1.5E-09   68.1  11.0  124  281-431   110-234 (245)
249 2oua_A Serine protease, protei  97.9 3.7E-06 1.3E-10   71.9   3.0  115  281-423    59-180 (188)
250 4fln_A Protease DO-like 2, chl  97.8 0.00011 3.9E-09   72.5  11.3   86   56-167    74-159 (539)
251 1wxr_A Haemoglobin protease; h  97.8 7.9E-05 2.7E-09   77.6  10.5   84   58-168    58-146 (1048)
252 1zyo_A Serine protease; beta-b  97.8 4.3E-05 1.5E-09   64.8   6.9   31   41-77     18-51  (191)
253 3stj_A Protease DEGQ; serine p  97.2  0.0023 7.7E-08   60.1  11.4  121  281-428   110-231 (345)
254 1mbm_A NSP4 proteinase, chymot  96.1    0.04 1.4E-06   45.5   9.8   23   55-77     14-37  (198)
255 3pv2_A DEGQ; trypsin fold, PDZ  96.1   0.031 1.1E-06   54.3  11.0  124  281-429   124-250 (451)
256 4a8c_A Periplasmic PH-dependen  96.0   0.035 1.2E-06   53.8  10.7   98  281-405   110-207 (436)
257 2h5c_A Alpha-lytic protease; s  96.0  0.0054 1.8E-07   52.5   4.4   40  378-421   140-187 (198)
258 3fan_A Non-structural protein;  95.4    0.16 5.6E-06   42.6  10.6   37   36-78     16-53  (213)
259 3syj_A Adhesion and penetratio  94.7    0.15 5.1E-06   52.6  10.4   31  216-246   212-243 (1011)
260 1wxr_A Haemoglobin protease; h  92.8    0.19 6.5E-06   52.7   7.3   56  375-434   201-257 (1048)
261 1ky9_A Protease DO, DEGP, HTRA  91.8     1.4 4.8E-05   42.5  11.8   98  280-404   132-229 (448)
262 3syj_A Adhesion and penetratio  87.8    0.72 2.4E-05   47.8   6.1   55  375-433   212-267 (1011)
263 2fyq_A Chymotrypsin-like cyste  87.7     2.9  0.0001   32.9   8.1   42  204-246   132-175 (194)
264 4fln_A Protease DO-like 2, chl  86.2     4.3 0.00015   40.0  10.6   40  281-326   120-159 (539)
265 3mmg_A Nuclear inclusion prote  85.6     6.7 0.00023   33.8  10.1   28  216-246   145-172 (241)
266 4ash_A NS6 protease; hydrolase  84.2     2.7 9.2E-05   33.0   6.3   42  204-246   121-164 (185)
267 3h09_A IGA1 protease, immunogl  83.7    0.66 2.3E-05   47.9   3.5   28  217-244   258-286 (989)
268 3sze_A Serine protease ESPP; p  80.3    0.98 3.3E-05   46.7   3.3   27  217-243   203-230 (968)
269 1lvm_A Catalytic domain of the  79.5      16 0.00056   31.2  10.1  137   61-246    42-180 (229)
270 3h09_A IGA1 protease, immunogl  78.5     1.6 5.5E-05   45.1   4.2   56  375-433   257-313 (989)
271 3sze_A Serine protease ESPP; p  74.3     2.3 7.8E-05   44.1   4.0   28  375-402   202-230 (968)
272 1mbm_A NSP4 proteinase, chymot  70.1     1.7 5.7E-05   36.0   1.6   22  378-404   111-132 (198)
273 3fan_A Non-structural protein;  54.6     8.3 0.00028   32.4   3.0   21  379-403   125-145 (213)
274 2w5e_A Putative serine proteas  46.3      13 0.00045   30.0   3.0   25  375-403   121-145 (163)
275 4ash_A NS6 protease; hydrolase  45.8      30   0.001   27.2   4.7   29  375-404   135-163 (185)
276 1fiw_L Beta-acrosin light chai  37.5      17 0.00059   19.0   1.5   24    7-30      2-26  (26)
277 2fyq_A Chymotrypsin-like cyste  34.9      30   0.001   27.3   3.2   29  375-404   146-174 (194)
278 1zyo_A Serine protease; beta-b  33.0      14 0.00049   30.8   1.2   43  377-427   146-188 (191)
279 2hrv_A 2A cysteine proteinase;  32.2      29   0.001   27.0   2.7   34  379-422   104-137 (142)
280 1z8r_A Coxsackievirus B4 polyp  32.0      29 0.00098   27.7   2.7   34  379-422   124-157 (166)
281 1gj7_A Urokinase-type plasmino  25.2      34  0.0011   18.2   1.4   19    9-29      8-26  (26)
282 4dcd_A Protease 3C, genome pol  23.0 3.2E+02   0.011   22.5  10.8   60   56-135    30-89  (190)
283 4agk_A Capsid protein, coat pr  21.0      51  0.0018   25.1   2.2   25  217-245   104-128 (158)
284 2hal_A Hepatitis A protease 3C  20.8 3.7E+02   0.013   22.4  11.8   32  215-246   165-196 (212)
285 3zve_A 3C protease; hydrolase,  20.3 3.6E+02   0.012   22.1   9.6   25  217-246   142-166 (190)
286 2hrv_A 2A cysteine proteinase;  20.2      58   0.002   25.3   2.4   23  219-246   103-125 (142)
287 1z8r_A Coxsackievirus B4 polyp  20.2      57  0.0019   26.0   2.4   23  219-246   123-145 (166)

No 1  
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=100.00  E-value=3.6e-51  Score=388.84  Aligned_cols=260  Identities=24%  Similarity=0.405  Sum_probs=197.8

Q ss_pred             cCCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEE
Q psy16044         11 ARDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTA   90 (436)
Q Consensus        11 ~~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v   90 (436)
                      .+.||++..+....+||+||++|.+++|||+|+|+...      .++|+||||+++||||||||+.....     ....+
T Consensus        87 ~p~CG~p~~~~~~~~RIvGG~~a~~g~~Pw~v~l~~~~------~~~CGGsLIs~~~VLTAAHCv~~~~~-----~~~~~  155 (347)
T 4f4o_C           87 EAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQAKMISHH------NLTSGATLINEQWLLTTAKNLRLGHK-----NDTKA  155 (347)
T ss_dssp             EECCSCCSSCC-----CCSCCBCCSCCCTTCEEEECTT------CCEEECCBCSSSEEEECHHHHTTTSC-----TTCCH
T ss_pred             cCCCCCCCCCCCCCCeEECCEECCCCCCCcEEEEEeCC------CEEEEEEEEcCCEEEeCcccccCCCC-----CcceE
Confidence            45799877766778899999999999999999998643      68999999999999999999965321     11222


Q ss_pred             EeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCC
Q psy16044         91 VLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKP  170 (436)
Q Consensus        91 ~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~  170 (436)
                      ..+...........+.+.|+++++||+|+  .||||||||++|+. ++.+++|||||..+  ....+..++++|||.+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~V~~i~~HP~y~--~nDIALlkL~~~v~-~~~~v~PicLp~~~--~~~~g~~~~v~GWG~~~~  230 (347)
T 4f4o_C          156 KDIAPTLRLYVGKKQEVEIEKVIFHPDNS--TVDIGLIKLKQKVP-VNERVMPICLPSKD--YVNVGLVGYVSGWGRNAN  230 (347)
T ss_dssp             HHHGGGCEEEETTTEEECEEEEEECSCTT--TCCCEEEEESSCCC-CSSSCCCCBCCSSC--CCCTTCEEEEEECSBCTT
T ss_pred             EeeeeeeeecCCCeEEEEEEEEEECcCCC--CCCEEEEEECCCcc-CCCceeeeecCccc--cCCCCcEEEEeccccCCC
Confidence            22322222223345788999999999986  58999999999999 78899999999853  345788999999998763


Q ss_pred             CCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC
Q psy16044        171 KGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV  250 (436)
Q Consensus       171 ~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~  250 (436)
                       +..+..|+++.+++++.+.|...|.......                            .                   
T Consensus       231 -~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~----------------------------~-------------------  262 (347)
T 4f4o_C          231 -LNFTEHLKYVMLPVADQEKCVQYYEGSTVPE----------------------------K-------------------  262 (347)
T ss_dssp             -SSBCSSCEEEEEEEECHHHHHHHHSSCSSGG----------------------------G-------------------
T ss_pred             -CCCCccceEEEEEEeCHHHHHHHhccccccc----------------------------c-------------------
Confidence             4567789999999999999998875321100                            0                   


Q ss_pred             CcccccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCC
Q psy16044        251 GIRYSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK  330 (436)
Q Consensus       251 ~~~y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~  330 (436)
                                                                                                      
T Consensus       263 --------------------------------------------------------------------------------  262 (347)
T 4f4o_C          263 --------------------------------------------------------------------------------  262 (347)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCC
Q psy16044        331 GDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKS  409 (436)
Q Consensus       331 ~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~  409 (436)
                                       ..+.........++++||||+...+++++|+|||||||++.. .+++|+|+||+|||.+|+. 
T Consensus       263 -----------------~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~~-  324 (347)
T 4f4o_C          263 -----------------KTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCRT-  324 (347)
T ss_dssp             -----------------CCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTTT-
T ss_pred             -----------------ccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCCC-
Confidence                             000000000114688999998877778999999999999976 4789999999999999976 


Q ss_pred             CCCeEEEeCcccHHHHHHHHhhh
Q psy16044        410 GYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       410 ~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      ..|+|||||++|++||+++|+++
T Consensus       325 ~~pgVYTrVs~y~~WI~~~i~~N  347 (347)
T 4f4o_C          325 AEYGVYVRVTSILDWIQTTIADN  347 (347)
T ss_dssp             SSCEEEEEHHHHHHHHHHHHTC-
T ss_pred             CCCeEEEEHHHHHHHHHHHHHcC
Confidence            46999999999999999999764


No 2  
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=100.00  E-value=9.7e-50  Score=370.39  Aligned_cols=257  Identities=29%  Similarity=0.551  Sum_probs=197.0

Q ss_pred             ceecCCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcc
Q psy16044          8 VTFARDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPEL   87 (436)
Q Consensus         8 ~~~~~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~   87 (436)
                      ..++.+||++.  .....||+||++|..++|||+|+|+...... ...|+|+||||+++||||||||+.+.    .....
T Consensus         7 ~~~~~~CG~~~--~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~-~~~~~CgGsLIs~~~VLTAAHCv~~~----~~~~~   79 (276)
T 2vnt_A            7 EELKFQCGQKT--LRPRFKIIGGEFTTIENQPWFAAIYRRHRGG-SVTYVCGGSLMSPCWVISATHCFIDY----PKKED   79 (276)
T ss_dssp             ---CCCTTCCC--C-----CCSSEECCGGGSTTEEEEEEECSSS-CEEEEEEEEEEETTEEEECGGGTTTC----CCGGG
T ss_pred             ccCCCCCCCcC--CCCCCcEECCEECCCCCCCcEEEEEEecCCC-cceeEEEEEEeeCCEEEECcccccCC----CCCcc
Confidence            34567899653  4457899999999999999999998765432 23689999999999999999999763    23466


Q ss_pred             eEEEeccccCCccCCceEEEeeeEEEeCCCCC----CCCCceeEEEeCCCCC---CCCCceeeeeecCCCCCCCCCCCcE
Q psy16044         88 WTAVLGDWDRTEEEKSEVRIPVERIRVHEEFH----NYHHDIALLKLSRPTS---ARDKGVRAVCLTDADKRPVNPKQQC  160 (436)
Q Consensus        88 ~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~----~~~~DiAll~L~~~~~---~~~~~v~pi~l~~~~~~~~~~~~~~  160 (436)
                      +.|++|..++.......+.+.|+++++||+|+    ...+|||||+|+.++.   .++..++|||||..           
T Consensus        80 ~~v~~g~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~-----------  148 (276)
T 2vnt_A           80 YIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSM-----------  148 (276)
T ss_dssp             EEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCS-----------
T ss_pred             EEEEeeeeeccCCCCceEEEEEEEEEEccccccccccccchhhhhhhhccccccccCcccccccccccc-----------
Confidence            88999998888777778899999999999997    2468999999998764   14455666666553           


Q ss_pred             EEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEE
Q psy16044        161 VATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGI  240 (436)
Q Consensus       161 ~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI  240 (436)
                                                                                                      
T Consensus       149 --------------------------------------------------------------------------------  148 (276)
T 2vnt_A          149 --------------------------------------------------------------------------------  148 (276)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EeEcCCCCCCCcccccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEE
Q psy16044        241 TSFGSGYCGVGIRYSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCV  320 (436)
Q Consensus       241 ~S~g~~~C~~~~~y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~  320 (436)
                                                                                          .. ....++.|.
T Consensus       149 --------------------------------------------------------------------~~-~~~~~~~~~  159 (276)
T 2vnt_A          149 --------------------------------------------------------------------YN-DPQFGTSCE  159 (276)
T ss_dssp             --------------------------------------------------------------------SC-CCCTTCEEE
T ss_pred             --------------------------------------------------------------------cc-cccccceEE
Confidence                                                                                21 122344455


Q ss_pred             EEecCCCCCCC-CccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEE
Q psy16044        321 ATGWGRVKPKG-DLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGI  399 (436)
Q Consensus       321 ~~Gwg~~~~~~-~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi  399 (436)
                      ++|||.+.... ..+..++.+.+++++.++|++.+.......+.++|+....+..+.|.|||||||++.. +++|+|+||
T Consensus       160 ~~g~G~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~-~~~~~lvGI  238 (276)
T 2vnt_A          160 ITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGI  238 (276)
T ss_dssp             EEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEE-TTEEEEEEE
T ss_pred             EEEeeccccCCCCcchhheeeeeeEecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEee-CCeEEEEEE
Confidence            55555443322 2345678889999999999988765555677888887777777999999999999985 789999999


Q ss_pred             EEecCCCCCCCCCeEEEeCcccHHHHHHHHhhh
Q psy16044        400 TSFGSGCAKSGYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       400 ~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      +|||.+|+..+.|+|||||++|++||+++|+++
T Consensus       239 vS~G~~C~~~~~P~vyt~V~~y~~WI~~~~~~~  271 (276)
T 2vnt_A          239 VSWGRGCALKDKPGVYTRVSHFLPWIRSHTKEE  271 (276)
T ss_dssp             EEECSSSSBTTBCEEEEEGGGGHHHHHHHHSCC
T ss_pred             EEECCCCCCCCCCEEEEEHHHHHHHHHHHhhhh
Confidence            999999998888999999999999999999754


No 3  
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=100.00  E-value=2.9e-49  Score=360.07  Aligned_cols=239  Identities=34%  Similarity=0.724  Sum_probs=192.1

Q ss_pred             CCCCccCCCC--CCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEE
Q psy16044         14 CGVGIRYSHR--QPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAV   91 (436)
Q Consensus        14 CG~~~~~~~~--~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~   91 (436)
                      ||.+...+..  ..||+||++|.+++|||+|+|+...   +  .++|+||||+++||||||||+..        ..+.|+
T Consensus         1 cg~~~~~p~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~---~--~~~CgGtLI~~~~VLTAAHC~~~--------~~~~v~   67 (245)
T 1t8o_A            1 CGVPAIQPVLSGLSRIVNGEEAVPGSWPWQVSLQDKT---G--FHFCGGSLINENWVVTAAHCGVT--------TSDVVV   67 (245)
T ss_dssp             CCCCSSCCCCC----CBTCEECCTTSSTTEEEEECTT---C--CEEEEEEEEETTEEEECGGGCCC--------TTSEEE
T ss_pred             CCCCcccccccCCCceECCEECCCCCCCceEEEEcCC---C--CeEEEEEEeeCCEEEEcHHhCcC--------CCcEEE
Confidence            7755544332  3599999999999999999998642   1  68999999999999999999864        345789


Q ss_pred             eccccCCccCCceEEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccC
Q psy16044         92 LGDWDRTEEEKSEVRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVK  169 (436)
Q Consensus        92 ~g~~~~~~~~~~~~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~  169 (436)
                      +|.++........+.+.|.+++.||+|+  ...||||||||++|+. ++.+++|||||.... ....+..++++|||.+.
T Consensus        68 ~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG~~~  145 (245)
T 1t8o_A           68 AGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAAS-FSQTVSAVCLPSASD-DFAAGTTCVTTGWGLTR  145 (245)
T ss_dssp             ESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCC-CBTTBCCCBCCCTTC-CCCTTCEEEEEESCCSC
T ss_pred             EeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCc-CCCceeeeECCCCcc-CCCCCCEEEEEEeCCCC
Confidence            9988876655566889999999999998  4689999999999999 678899999987432 23345566666666432


Q ss_pred             CCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC
Q psy16044        170 PKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG  249 (436)
Q Consensus       170 ~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~  249 (436)
                                                                                                      
T Consensus       146 --------------------------------------------------------------------------------  145 (245)
T 1t8o_A          146 --------------------------------------------------------------------------------  145 (245)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcccccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCC
Q psy16044        250 VGIRYSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKP  329 (436)
Q Consensus       250 ~~~~y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~  329 (436)
                                                                                                     .
T Consensus       146 -------------------------------------------------------------------------------~  146 (245)
T 1t8o_A          146 -------------------------------------------------------------------------------Y  146 (245)
T ss_dssp             -------------------------------------------------------------------------------C
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           1


Q ss_pred             CC-CccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCC
Q psy16044        330 KG-DLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAK  408 (436)
Q Consensus       330 ~~-~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~  408 (436)
                      .. ..+..|+++.+++++.++|++.+..  .+++.|||++  ..+.+.|.|||||||++.. +++|+|+||+|||..|+.
T Consensus       147 ~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~--~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~c~~  221 (245)
T 1t8o_A          147 TNANTPDRLQQASLPLLSNTNCKKYWGT--KIKDAMICAG--ASGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCS  221 (245)
T ss_dssp             --CCCCSBCEEEEEEEECHHHHHHHHGG--GCCTTEEEEE--CSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCC
T ss_pred             CCCCCcchheEEEEeeEcchhhhHhhcC--cCCCceEEcc--CCCCccCcccCcCCEEEEE-CCEEEEEEEEEeCCCCCC
Confidence            11 1255789999999999999988754  4789999997  3446899999999999985 789999999999999988


Q ss_pred             CCCCeEEEeCcccHHHHHHHHhh
Q psy16044        409 SGYPDVYTKLSFYLPWIRKQINI  431 (436)
Q Consensus       409 ~~~p~v~t~V~~~~~WI~~~i~~  431 (436)
                      .+.|++||||+.|++||+++|+.
T Consensus       222 ~~~p~vyt~V~~~~~WI~~~~~~  244 (245)
T 1t8o_A          222 TSTPGVYARVTALVNWVQQTLAA  244 (245)
T ss_dssp             TTSEEEEEEGGGTHHHHHHHHHT
T ss_pred             CCCCEEEEEHHHHHHHHHHHHcc
Confidence            78899999999999999999975


No 4  
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=100.00  E-value=1.6e-49  Score=370.58  Aligned_cols=249  Identities=31%  Similarity=0.552  Sum_probs=189.3

Q ss_pred             CCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCC-CCCCcceEEEeccccCCccCC
Q psy16044         24 QPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFS-LPIPELWTAVLGDWDRTEEEK  102 (436)
Q Consensus        24 ~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~-~~~~~~~~v~~g~~~~~~~~~  102 (436)
                      ..||+||.+|..++|||+|+|+....    ..++|+||||+++||||||||+...... ......+.|++|.++......
T Consensus        28 ~~rIvgG~~a~~~~~Pw~v~l~~~~~----~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~  103 (289)
T 2bdy_A           28 DGRIVEGSDAEIGMSPWQVMLFRKSP----QELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYER  103 (289)
T ss_dssp             ---CBSCEECCTTSCTTEEEEEETTT----TEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCT
T ss_pred             CCeEECCEECCCCCCCCeEEEEECCC----CCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCC
Confidence            46999999999999999999975421    1689999999999999999998542110 112456899999987654332


Q ss_pred             -ceEEEeeeEEEeCCCCC---CCCCceeEEEeCCCCCCCCCceeeeeecCCCCC--CCCCCCcEEEEecCccCCCCCccc
Q psy16044        103 -SEVRIPVERIRVHEEFH---NYHHDIALLKLSRPTSARDKGVRAVCLTDADKR--PVNPKQQCVATGWGRVKPKGDLVS  176 (436)
Q Consensus       103 -~~~~~~v~~i~~hp~y~---~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~--~~~~~~~~~~~GwG~~~~~~~~~~  176 (436)
                       ..+.+.|+++++||+|+   ...||||||||++|+. ++.+++|||||.....  ....+..++++|||.+......  
T Consensus       104 ~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~-~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~--  180 (289)
T 2bdy_A          104 NIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVA-FSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTA--  180 (289)
T ss_dssp             TTCEEEEEEEEEECTTCBTTTTCBTCCEEEEESSCCC-CBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-----
T ss_pred             CcceeeeeEEEEECCCCCCCCCCCCeEEEEEECCccc-cCCcccccCCCCccccccccCCCCEEEEECCCcCCCcccc--
Confidence             34667899999999997   3579999999999999 7788999999874211  1234566677777644311000  


Q ss_pred             cceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCccccc
Q psy16044        177 KLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSH  256 (436)
Q Consensus       177 ~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~  256 (436)
                                                                            .                         
T Consensus       181 ------------------------------------------------------~-------------------------  181 (289)
T 2bdy_A          181 ------------------------------------------------------N-------------------------  181 (289)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ------------------------------------------------------C-------------------------
Confidence                                                                  0                         


Q ss_pred             ccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCcccc
Q psy16044        257 RQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSK  336 (436)
Q Consensus       257 v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~  336 (436)
                                                                                              .....+..
T Consensus       182 ------------------------------------------------------------------------~~~~~~~~  189 (289)
T 2bdy_A          182 ------------------------------------------------------------------------VGKGQPSV  189 (289)
T ss_dssp             ---------------------------------------------------------------------------CCCSB
T ss_pred             ------------------------------------------------------------------------cccccccc
Confidence                                                                                    00011457


Q ss_pred             ceEEEEEeeCccccccccCCCccCCCCceecccCC---CCCCCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCC
Q psy16044        337 LRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD---GFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYP  412 (436)
Q Consensus       337 l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~---~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p  412 (436)
                      |+++.+++++.+.|+..+..  .++++|||++...   ...+.|+|||||||+|.. .+++|+|+||+|||.+|+..+.|
T Consensus       190 L~~~~v~i~~~~~C~~~~~~--~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p  267 (289)
T 2bdy_A          190 LQVVNLPIVERPVCKDSTRI--RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKY  267 (289)
T ss_dssp             CEEEEEEBCCHHHHHHTCSS--CCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCC
T ss_pred             ceEEEEEEECHHHhhccccC--cCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCC
Confidence            99999999999999988754  4789999997543   246899999999999985 36899999999999999987889


Q ss_pred             eEEEeCcccHHHHHHHHhhh
Q psy16044        413 DVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       413 ~v~t~V~~~~~WI~~~i~~~  432 (436)
                      ++||||+.|++||+++|+..
T Consensus       268 ~vyt~V~~y~~WI~~~i~~~  287 (289)
T 2bdy_A          268 GFYTHVFRLKKWIQKVIDQF  287 (289)
T ss_dssp             EEEEETGGGHHHHHHHHHC-
T ss_pred             EEEEEHHHHHHHHHHHHHhc
Confidence            99999999999999999754


No 5  
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=100.00  E-value=1.6e-48  Score=354.37  Aligned_cols=235  Identities=35%  Similarity=0.706  Sum_probs=187.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+....  +...++|+||||+++||||||||+..       ...+.|++|..++.......+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~--~~~~~~CgGtLI~~~~VLTAAHC~~~-------~~~~~V~~G~~~~~~~~~~~~~   71 (241)
T 1bru_P            1 VVGGEDARPNSWPWQVSLQYDSS--GQWRHTCGGTLVDQSWVLTAAHCISS-------SRTYRVVLGRHSLSTNEPGSLA   71 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEET--TEEEEEEEEEEEETTEEEECGGGCCT-------TSCEEEEESCSBSSSCCTTCEE
T ss_pred             CCCCeECCCCCcCcEEEEEEecC--CceeeEEEeEEeeCCEEEEcHHhccc-------CCceEEEEEcccccCCCCccEE
Confidence            78999999999999999987532  11248999999999999999999862       2567899999887665556688


Q ss_pred             EeeeEEEeCCCCCC--CC--CceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        107 IPVERIRVHEEFHN--YH--HDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~~--~~--~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.|+++++||+|+.  ..  +|||||||++|+. ++..++|||||.... ....+..++++|||                
T Consensus        72 ~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG----------------  133 (241)
T 1bru_P           72 VKVSKLVVHQDWNSNQLSNGNDIALLKLASPVS-LTDKIQLGCLPAAGT-ILPNNYVCYVTGWG----------------  133 (241)
T ss_dssp             EEEEEEEECTTCCTTCGGGCCCCEEEEESSCCC-CCSSCCCCBCCCTTC-CCCTTCEEEEEESC----------------
T ss_pred             EEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcc-cCCccCCcccCCCcC-CCCCCCEEEEEEcc----------------
Confidence            99999999999973  34  9999999999999 677899999987421 12334455555555                


Q ss_pred             eeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceec
Q psy16044        183 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLI  262 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~  262 (436)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (241)
T 1bru_P          134 --------------------------------------------------------------------------------  133 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEE
Q psy16044        263 NGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  342 (436)
Q Consensus       263 ~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~  342 (436)
                                                                                     .+......+..|+++.+
T Consensus       134 ---------------------------------------------------------------~~~~~~~~~~~L~~~~~  150 (241)
T 1bru_P          134 ---------------------------------------------------------------RLQTNGASPDILQQGQL  150 (241)
T ss_dssp             ---------------------------------------------------------------CSSTTSCCCSBCEEEEE
T ss_pred             ---------------------------------------------------------------ccCCCCCCCccceeCEE
Confidence                                                                           43322233567889999


Q ss_pred             EeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC--CCCCCCCCeEEEeCcc
Q psy16044        343 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS--GCAKSGYPDVYTKLSF  420 (436)
Q Consensus       343 ~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~--~c~~~~~p~v~t~V~~  420 (436)
                      ++++.++|+..+.....++++|||++. .+..+.|.|||||||++...+++|+|+||+|||.  +|+..+.|++||||++
T Consensus       151 ~i~~~~~C~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~  229 (241)
T 1bru_P          151 LVVDYATCSKPGWWGSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSN  229 (241)
T ss_dssp             EEECHHHHTSTTTTGGGCCTTEEEECC-SSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGG
T ss_pred             EEecHHHhCcccccCCcCCCceEeecC-CCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHH
Confidence            999999998863222247899999984 4456899999999999986578999999999997  7887778999999999


Q ss_pred             cHHHHHHHHhhh
Q psy16044        421 YLPWIRKQINIA  432 (436)
Q Consensus       421 ~~~WI~~~i~~~  432 (436)
                      |++||+++|+++
T Consensus       230 ~~~WI~~~i~~n  241 (241)
T 1bru_P          230 YIDWINSVIANN  241 (241)
T ss_dssp             SHHHHHHHHHHC
T ss_pred             hHHHHHHHHhcC
Confidence            999999999753


No 6  
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=100.00  E-value=2.2e-48  Score=354.89  Aligned_cols=244  Identities=34%  Similarity=0.668  Sum_probs=192.0

Q ss_pred             CCCCCCccCCC-CCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEE
Q psy16044         12 RDCGVGIRYSH-RQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTA   90 (436)
Q Consensus        12 ~~CG~~~~~~~-~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v   90 (436)
                      .+||++...+. ...||+||++|.+++|||+|+|+...   +  .++|+||||+++||||||||+...    ..+..+.|
T Consensus         2 ~~cg~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~---~--~~~CgGsLIs~~~VLTAAHC~~~~----~~~~~~~v   72 (247)
T 1ddj_A            2 FDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRF---G--MHFCGGTLISPEWVLTAAHCLEKS----PRPSSYKV   72 (247)
T ss_dssp             CCTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECTT---S--CEEEEEEEEETTEEEECGGGGTTC----SCGGGCEE
T ss_pred             CccCCCCCCCcccCCCcCCCEECCCCCCCcEEEEEcCC---C--CeEEEEEEeeCCEEEEcHHHcCCC----CCCccEEE
Confidence            36997654432 24699999999999999999997532   1  689999999999999999999653    12456899


Q ss_pred             EeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCC
Q psy16044         91 VLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKP  170 (436)
Q Consensus        91 ~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~  170 (436)
                      ++|.++........+.+.|.+++.||.    .||||||||++|+. ++.+++|||||..+ .....+..++++|||    
T Consensus        73 ~~G~~~~~~~~~~~~~~~v~~~~~hp~----~~DIALl~L~~~v~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG----  142 (247)
T 1ddj_A           73 ILGAHQEVNLEPHVQEIEVSRLFLEPT----RKDIALLKLSSPAV-ITDKVIPACLPSPN-YVVADRTECFITGWG----  142 (247)
T ss_dssp             EESCSBSSSCCTTCEEEEEEEEEECTT----SCSCEEEEESSCCC-CCSSCCCCBCCCTT-CCCCTTCEEEEEECC----
T ss_pred             EEcccccCccCCceEEEEeeeEEcCCC----CCcEEEEEeCCcee-eCCCEEeeecCCcc-cCCCCCCEEEEEEcc----
Confidence            999887655555567889999999997    48999999999999 67889999998742 222334455555555    


Q ss_pred             CCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC
Q psy16044        171 KGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV  250 (436)
Q Consensus       171 ~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~  250 (436)
                                                                                                      
T Consensus       143 --------------------------------------------------------------------------------  142 (247)
T 1ddj_A          143 --------------------------------------------------------------------------------  142 (247)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcccccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCC
Q psy16044        251 GIRYSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK  330 (436)
Q Consensus       251 ~~~y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~  330 (436)
                                                                                                 .+...
T Consensus       143 ---------------------------------------------------------------------------~~~~~  147 (247)
T 1ddj_A          143 ---------------------------------------------------------------------------ETQGT  147 (247)
T ss_dssp             ---------------------------------------------------------------------------CCSSS
T ss_pred             ---------------------------------------------------------------------------cCCCC
Confidence                                                                                       33211


Q ss_pred             CCccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCC
Q psy16044        331 GDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSG  410 (436)
Q Consensus       331 ~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~  410 (436)
                       ..+..|+++.+++++.++|++.......+.+.|||++...++.+.|.|||||||++.. +++|+|+||+|||.+|+..+
T Consensus       148 -~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~~  225 (247)
T 1ddj_A          148 -FGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFE-KDKYILQGVTSWGLGCARPN  225 (247)
T ss_dssp             -TTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEC-SSSEEEEEEECGGGCCBBTT
T ss_pred             -CCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcCcEEEEE-CCcEEEEEEEEECCCCCCCC
Confidence             1245678888889999999875322224688999998766667899999999999984 68999999999999998777


Q ss_pred             CCeEEEeCcccHHHHHHHHhh
Q psy16044        411 YPDVYTKLSFYLPWIRKQINI  431 (436)
Q Consensus       411 ~p~v~t~V~~~~~WI~~~i~~  431 (436)
                      .|++||||+.|++||+++|++
T Consensus       226 ~p~vyt~V~~y~~WI~~~~~~  246 (247)
T 1ddj_A          226 KPGVYVRVSRFVTWIEGVMRN  246 (247)
T ss_dssp             BCEEEEEGGGSHHHHHHHHHT
T ss_pred             CCEEEEEhHHhHHHHHHHhhc
Confidence            899999999999999999975


No 7  
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=100.00  E-value=9.8e-49  Score=358.02  Aligned_cols=242  Identities=33%  Similarity=0.648  Sum_probs=199.4

Q ss_pred             CCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEec
Q psy16044         14 CGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLG   93 (436)
Q Consensus        14 CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g   93 (436)
                      ||.+...+....||+||++|.+++|||+|+|++....  ...++|+||||+++||||||||+.+       ...+.|++|
T Consensus         1 cg~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~--~~~~~CgGtLIs~~~VLTAAHC~~~-------~~~~~V~~G   71 (251)
T 1pyt_D            1 CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDN--TWRHTCGGTLITPNHVLTAAHCISN-------TLTYRVALG   71 (251)
T ss_dssp             CCCCSSCCCSSSSCCSSCCCCTTSSTTEEEEEEEETT--EEEEEEEEEEEETTEEEECGGGCCT-------TCCEEEEES
T ss_pred             CCCCccCCccCCccCCCEECCCCCCCceEEEEEEcCC--CcceEEEeEEecCCEEEECHHHhCC-------CceEEEEEc
Confidence            7866555556789999999999999999999865321  1268999999999999999999864       356789999


Q ss_pred             cccCCcc-CCceEEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCC
Q psy16044         94 DWDRTEE-EKSEVRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKP  170 (436)
Q Consensus        94 ~~~~~~~-~~~~~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~  170 (436)
                      .++.... ....+.+.|+++++||+|+  ...||||||||++|+. ++.+++|||||.... ....+..++++|||.+..
T Consensus        72 ~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG~~~~  149 (251)
T 1pyt_D           72 KNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVE-LGDTIQVACLPSEGS-LLPQDYPCFVTGWGRLYT  149 (251)
T ss_dssp             CSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCC-CCSSCCCCBCCCTTC-CCCTTCEEEECBCCCSSC
T ss_pred             ccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcc-cCCCeeeeEcCCCcc-cCCCCCEEEEEecccCCC
Confidence            9876532 2345778899999999997  4689999999999999 788899999998633 345688999999999887


Q ss_pred             CCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC-CCC
Q psy16044        171 KGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-YCG  249 (436)
Q Consensus       171 ~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~-~C~  249 (436)
                      .+..+..|++..+++++.+.|...+.......+.||||+. .+..++|.|||||||++.. +++|+|+||+|||.+ .|+
T Consensus       150 ~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~~~C~  227 (251)
T 1pyt_D          150 NGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGG-DGVISACNGDSGGPLNCQA-DGQWDVRGIVSFGSGLSCN  227 (251)
T ss_dssp             CSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECC-SCSSCCCCSCTTCEEEEES-SSSEEEEEEEEECCSSCTT
T ss_pred             CCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecC-CCCCccCCCCCCCceEEEE-CCCEEEEEEEEECCCCCCC
Confidence            6666778999999999999998765433345679999986 4447899999999999974 789999999999973 465


Q ss_pred             ---CCcccccccceecCCcccc
Q psy16044        250 ---VGIRYSHRQPRLINGKESI  268 (436)
Q Consensus       250 ---~~~~y~~v~~~~~~~~~~~  268 (436)
                         .+.+|++|.+|..||.+.+
T Consensus       228 ~~~~p~vyt~V~~~~~WI~~~~  249 (251)
T 1pyt_D          228 TFKKPTVFTRVSAYIDWINQKL  249 (251)
T ss_dssp             BTTBCEEEEEGGGGHHHHHHHT
T ss_pred             CCCCCeEEEEHHHHHHHHHHHh
Confidence               3679999999999998765


No 8  
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=100.00  E-value=4.4e-49  Score=365.81  Aligned_cols=256  Identities=26%  Similarity=0.452  Sum_probs=196.4

Q ss_pred             ccCceecCCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCC
Q psy16044          5 CDTVTFARDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPI   84 (436)
Q Consensus         5 ~~~~~~~~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~   84 (436)
                      +++..++.+||++.  .....||+||++|..++|||+|+|+..... +...++|+||||+++||||||||+.+.    ..
T Consensus         4 ~~~~~~~~~CG~~~--~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~-~~~~~~CgGtLI~~~~VLTAAHC~~~~----~~   76 (276)
T 2jde_A            4 SPPEELKFQCGQKT--LRPRFKIIGGEFTTIENQPWFAAIYRRHRG-GSVTYVCGGSLMSPCWVISATHCFIDY----PK   76 (276)
T ss_dssp             ----------------------CBSSEECCGGGSTTEEEEEEECCC-CCEEEEEEEEEEETTEEEECGGGTTTS----CC
T ss_pred             CCcccccCCCCCCC--CCCCCCeECCEECCCCCCCeEEEEEEecCC-CccceeeeeEEeeCCEEEEcHHhccCC----CC
Confidence            45667788999654  345679999999999999999999876432 222578999999999999999999653    13


Q ss_pred             CcceEEEeccccCCccCCceEEEeeeEEEeCCCCCC----CCCceeEEEeCCC----CCCCCCceeeeeecCCCCCCCCC
Q psy16044         85 PELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHN----YHHDIALLKLSRP----TSARDKGVRAVCLTDADKRPVNP  156 (436)
Q Consensus        85 ~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~----~~~DiAll~L~~~----~~~~~~~v~pi~l~~~~~~~~~~  156 (436)
                      ...+.|++|...........+.+.|+++++||+|+.    ..||||||+|++|    +. ++..++|||||... .....
T Consensus        77 ~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~-~~~~v~picLp~~~-~~~~~  154 (276)
T 2jde_A           77 KEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQ-PSRTIQTICLPSMY-NDPQF  154 (276)
T ss_dssp             GGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTSCCCC-CBTTBCCCBCCBTT-BCCCT
T ss_pred             cccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCccccccc-cCCceEccCCCCcc-cCCCC
Confidence            456899999988877666678899999999999972    4689999999999    66 67889999999753 33456


Q ss_pred             CCcEEEEecCccCCCCC-ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcE
Q psy16044        157 KQQCVATGWGRVKPKGD-LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRW  235 (436)
Q Consensus       157 ~~~~~~~GwG~~~~~~~-~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~  235 (436)
                      +..|+++|||.+..... .+..|+...+++++.+.|...+.......+.||||+...+..++|.|||||||++.. +++|
T Consensus       155 ~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~  233 (276)
T 2jde_A          155 GTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRM  233 (276)
T ss_dssp             TCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEE-TTEE
T ss_pred             CCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCCeEEecCCCCCCcccccccCcceEEEe-CCcE
Confidence            88999999999876553 577899999999999999976543345667999999887778999999999999974 7899


Q ss_pred             EEEEEEeEcCCCCC--CCcccccccceecCCccccCC
Q psy16044        236 YLAGITSFGSGYCG--VGIRYSHRQPRLINGKESIRG  270 (436)
Q Consensus       236 ~l~GI~S~g~~~C~--~~~~y~~v~~~~~~~~~~~~~  270 (436)
                      +|+||+|||.+|+.  .+.+|++|.+|..||.+.+..
T Consensus       234 ~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~  270 (276)
T 2jde_A          234 TLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTKE  270 (276)
T ss_dssp             EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHTC--
T ss_pred             EEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHhhh
Confidence            99999999988542  468999999999999987753


No 9  
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=100.00  E-value=2.6e-48  Score=360.82  Aligned_cols=251  Identities=26%  Similarity=0.579  Sum_probs=201.3

Q ss_pred             CceecCCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCc
Q psy16044          7 TVTFARDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPE   86 (436)
Q Consensus         7 ~~~~~~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~   86 (436)
                      +..++..||.+    ....||+||++|.+++|||+|+|++.... +...++|+||||+++||||||||+...... ....
T Consensus         7 ~~~l~~~CG~~----~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~-~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~-~~~~   80 (278)
T 2olg_A            7 PELLPNDCGYQ----VEADKILNGDDTVPEEFPWTAMIGYKNSS-NFEQFACGGSLINNRYIVTAAHCVAGRVLR-VVGA   80 (278)
T ss_dssp             GGGSCSSCSCC----CCCCCSCCSSBCCTTSSTTEEEEEEECTT-CCEEEEEEEEECSSSEEEECGGGTSTHHHH-HTCE
T ss_pred             cccChhHhCCC----CCCCceECCEECCCCCCCceEEEEEecCC-CCcceeEEEEEEeCCEEEEhHHhCCCcccc-cccc
Confidence            34456689954    24579999999999999999999876432 222689999999999999999998652100 0124


Q ss_pred             ceEEEeccccCCccC-----------CceEEEeeeEEEeCCCCCC----CCCceeEEEeCCCCCCCCCceeeeeecCCCC
Q psy16044         87 LWTAVLGDWDRTEEE-----------KSEVRIPVERIRVHEEFHN----YHHDIALLKLSRPTSARDKGVRAVCLTDADK  151 (436)
Q Consensus        87 ~~~v~~g~~~~~~~~-----------~~~~~~~v~~i~~hp~y~~----~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~  151 (436)
                      .+.|++|.++.....           ...+.+.|+++++||+|+.    ..||||||||++|+. ++.+++|||||....
T Consensus        81 ~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~-~~~~v~picLp~~~~  159 (278)
T 2olg_A           81 LNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVE-FTNYIRPVCLPQPNE  159 (278)
T ss_dssp             EEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCC-CCSSCCCCBCCCTTC
T ss_pred             eeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCc-CCCCcCccCcCCCCC
Confidence            578999988765432           2357789999999999973    269999999999999 788899999998633


Q ss_pred             CCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCC-CcCCcCCeEEeccCCCCCCCccCCCCCeeeeEe
Q psy16044        152 RPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGD-SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL  230 (436)
Q Consensus       152 ~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~  230 (436)
                       ....+..++++|||.+.. +..+..|+++.+++++.+.|...+.. ....++.||||+...+ .++|.|||||||++..
T Consensus       160 -~~~~g~~~~v~GWG~t~~-~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~-~~~C~GDSGGPL~~~~  236 (278)
T 2olg_A          160 -EVQVGQRLTVVGWGRTET-GQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKA-KDSCGGDSGGPLLAER  236 (278)
T ss_dssp             -CCCTTCEEEEEESCCSSS-CCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCCTTEEEECCTTC-TTCCCCCTTCEEEEEE
T ss_pred             -CcCCCCEEEEEcCCcCCC-CCccchhhcccccccCHHHHHHHhccccccCCCceEeeecCCC-CeeCCCccCcceEEEc
Confidence             345789999999998874 34567899999999999999988754 2346779999987554 7899999999999986


Q ss_pred             cCCcEEEEEEEeEcCCCCCC---CcccccccceecCCcccc
Q psy16044        231 KDGRWYLAGITSFGSGYCGV---GIRYSHRQPRLINGKESI  268 (436)
Q Consensus       231 ~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~~~~~~~~~~  268 (436)
                      .+++|+|+||+|||.+ |+.   +.+|++|.+|..||.+.+
T Consensus       237 ~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i  276 (278)
T 2olg_A          237 ANQQFFLEGLVSFGAT-CGTEGWPGIYTKVGKYRDWIEGNI  276 (278)
T ss_dssp             GGGEEEEEEEEEECCB-CSTTCBCEEEEEGGGGHHHHHTTC
T ss_pred             CCCcEEEEEEEEECCC-CCCCCCCcEEeEHHHHHHHHHHhh
Confidence            6789999999999976 543   679999999999998765


No 10 
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=100.00  E-value=3.3e-48  Score=354.34  Aligned_cols=236  Identities=36%  Similarity=0.669  Sum_probs=189.9

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+...     ..++|+||||+++||||||||+..       ...+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~-----~~~~CgGsLI~~~~VLTAAHC~~~-------~~~~~v~~G~~~~~~~~~~~~~   68 (250)
T 1aut_C            1 LIDGKMTRRGDSPWQVVLLDSK-----KKLACGAVLIHPSWVLTAAHCMDE-------SKKLLVRLGEYDLRRWEKWELD   68 (250)
T ss_dssp             CBSCEECCTTSCTTEEEEECTT-----SCEEEEEEEEETTEEEECGGGSSS-------CSCCEEEESCCBTTCCCTTCEE
T ss_pred             CCCCEECCCCCCCCEEEEecCC-----CceEEEEEEeeCCEEEEChHHcCC-------CCceEEEEcccccCCCCCccEE
Confidence            7899999999999999997532     168999999999999999999864       2457899999887665556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCC---CCCCCCCcEEEEecCccCCCCCccccceee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADK---RPVNPKQQCVATGWGRVKPKGDLVSKLRQI  181 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~---~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~  181 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++.+++|||||....   .....+..++++|||.+......       
T Consensus        69 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~-------  140 (250)
T 1aut_C           69 LDIKEVFVHPNYSKSTTDNDIALLHLAQPAT-LSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKE-------  140 (250)
T ss_dssp             EEEEEEEECTTCBTTTTBTCCEEEEESSCCC-CBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSC-------
T ss_pred             EEEEEEEECCCCCCCCCCCcEEEEEECCccc-CCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCcc-------
Confidence            9999999999997  4679999999999999 778899999987421   11234566777777743311000       


Q ss_pred             eeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCccccccccee
Q psy16044        182 RVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRL  261 (436)
Q Consensus       182 ~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~  261 (436)
                                                                                                      
T Consensus       141 --------------------------------------------------------------------------------  140 (250)
T 1aut_C          141 --------------------------------------------------------------------------------  140 (250)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEE
Q psy16044        262 INGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIR  341 (436)
Q Consensus       262 ~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~  341 (436)
                                                                                         .....+..|+++.
T Consensus       141 -------------------------------------------------------------------~~~~~~~~L~~~~  153 (250)
T 1aut_C          141 -------------------------------------------------------------------AKRNRTFVLNFIK  153 (250)
T ss_dssp             -------------------------------------------------------------------CCSSCSSBCEEEE
T ss_pred             -------------------------------------------------------------------ccccccceeeEEE
Confidence                                                                               0001134688999


Q ss_pred             EEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCccc
Q psy16044        342 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFY  421 (436)
Q Consensus       342 ~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~  421 (436)
                      +++++.++|++.+..  .+.++|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|
T Consensus       154 ~~i~~~~~C~~~~~~--~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y  230 (250)
T 1aut_C          154 IPVVPHNECSEVMSN--MVSENMLCAGILGDRQDACEGDSGGPMVASF-HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRY  230 (250)
T ss_dssp             EEEECHHHHHHHCSS--CCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEECGGGT
T ss_pred             EEEecHHHhhHHhcc--CCCCCEEEeCCCCCCCCCCCCCCchheEEEE-CCeEEEEEEEEECCCCCCCCCCEEEEEHHHH
Confidence            999999999988765  4689999998766667899999999999975 7899999999999999877789999999999


Q ss_pred             HHHHHHHHhhh
Q psy16044        422 LPWIRKQINIA  432 (436)
Q Consensus       422 ~~WI~~~i~~~  432 (436)
                      ++||+++|+..
T Consensus       231 ~~WI~~~~~~~  241 (250)
T 1aut_C          231 LDWIHGHIRDK  241 (250)
T ss_dssp             HHHHHHHHC--
T ss_pred             HHHHHHHhhcc
Confidence            99999999754


No 11 
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=100.00  E-value=7e-48  Score=372.14  Aligned_cols=257  Identities=25%  Similarity=0.537  Sum_probs=194.4

Q ss_pred             cCCCCCCccCCCCCCeEeCC-cccCCCCCcceEEEeeeccC--CCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcc
Q psy16044         11 ARDCGVGIRYSHRQPRLING-KESIRGAWPWQVSLQVLHPR--LGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPEL   87 (436)
Q Consensus        11 ~~~CG~~~~~~~~~~~i~~G-~~a~~~~~Pw~v~i~~~~~~--~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~   87 (436)
                      +..||.+... ....||+|| .+|..++|||+|+|+.....  .+...++|+||||+++||||||||+.....   ....
T Consensus       115 ~~~CG~~~~~-~~~~rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~---~~~~  190 (394)
T 2b9l_A          115 PSFCGIRNER-GLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQS---NLDA  190 (394)
T ss_dssp             CCCTTBCCTT-CSSCEEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGTT---CGGG
T ss_pred             CCCCCCCCCC-CCCceeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCCC---Cccc
Confidence            4679954321 124699999 89999999999999875321  112368999999999999999999965311   2356


Q ss_pred             eEEEeccccCCccCC--ceEEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEE
Q psy16044         88 WTAVLGDWDRTEEEK--SEVRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVAT  163 (436)
Q Consensus        88 ~~v~~g~~~~~~~~~--~~~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~  163 (436)
                      +.|++|.++......  ..+.+.|+++++||+|+  ...||||||||++|+. ++.+|+|||||....  ...+..|+++
T Consensus       191 ~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~-~~~~v~PicLp~~~~--~~~~~~~~v~  267 (394)
T 2b9l_A          191 IKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLV-QADNIGTICLPQQSQ--IFDSTECFAS  267 (394)
T ss_dssp             EEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCB-CCTTCCCCBCCCTTC--CCCCSCEEEE
T ss_pred             EEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecCccc-cCCceeeeEcCCccc--CccCCEEEEE
Confidence            899999987654332  35788999999999998  4689999999999999 778899999997532  2234667777


Q ss_pred             ecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeE
Q psy16044        164 GWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSF  243 (436)
Q Consensus       164 GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~  243 (436)
                      |||.+.....                                                                      
T Consensus       268 GWG~t~~~~~----------------------------------------------------------------------  277 (394)
T 2b9l_A          268 GWGKKEFGSR----------------------------------------------------------------------  277 (394)
T ss_dssp             ECCTTTTTCT----------------------------------------------------------------------
T ss_pred             eccCccCCCC----------------------------------------------------------------------
Confidence            7775432110                                                                      


Q ss_pred             cCCCCCCCcccccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEe
Q psy16044        244 GSGYCGVGIRYSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATG  323 (436)
Q Consensus       244 g~~~C~~~~~y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~G  323 (436)
                                                                                                      
T Consensus       278 --------------------------------------------------------------------------------  277 (394)
T 2b9l_A          278 --------------------------------------------------------------------------------  277 (394)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCccccceEEEEEeeCccccccccCC-----CccCCCCceecccCCCCCCCccCCCCceeeeEe--cCCcEEE
Q psy16044        324 WGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGD-----SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL--KDGRWYL  396 (436)
Q Consensus       324 wg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~--~~~~~~l  396 (436)
                             ...+..|+++.+++++.++|+..+..     .+.+++.||||+... +++.|.|||||||+|..  .+++|+|
T Consensus       278 -------~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~-g~d~C~GDSGGPLv~~~~~~~~~~~l  349 (394)
T 2b9l_A          278 -------HRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQ-GKDTCTGDGGSPLFCPDPRNPSRYMQ  349 (394)
T ss_dssp             -------TSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCBS-SCSCCSSCTTCEEEEEETTEEEEEEE
T ss_pred             -------CcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEeeCCC-CCcCCCCCcchhhEEEEcCCCCeEEE
Confidence                   01234567777777777777665422     124688999998654 46899999999999974  3578999


Q ss_pred             EEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHhhh
Q psy16044        397 AGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       397 ~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      +||+|||.+|+..+.|+|||||+.|++||+++|+..
T Consensus       350 vGIvS~G~~C~~~~~PgVYT~V~~y~~WI~~~i~~~  385 (394)
T 2b9l_A          350 MGIVAWGIGCGDENVPGVYANVAHFRNWIDQEMQAK  385 (394)
T ss_dssp             EEEESCTTCCCBSSSCEEEEEGGGGHHHHHHHHHHT
T ss_pred             EEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHHhc
Confidence            999999999987788999999999999999999754


No 12 
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=100.00  E-value=3.2e-48  Score=361.45  Aligned_cols=238  Identities=29%  Similarity=0.528  Sum_probs=193.0

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccC-----
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEE-----  101 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~-----  101 (436)
                      |+||++|..++|||+|+|++.....+...++|+||||+++||||||||+....    ....+.|++|..+.....     
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~----~~~~~~v~~G~~~~~~~~~~~~~   76 (290)
T 1fiw_A            1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKK----KVTDWRLIFGAKEVEWGTNKPVK   76 (290)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSSCC----SGGGEEEEESCSBCCTTCCSCCC
T ss_pred             CCCCEECCCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCCCC----CCcceEEEecceEEeccCCCcCC
Confidence            78999999999999999987532222225899999999999999999996531    235688999987654321     


Q ss_pred             CceEEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC-ccccc
Q psy16044        102 KSEVRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKL  178 (436)
Q Consensus       102 ~~~~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~-~~~~l  178 (436)
                      ...+.+.|+++++||+|+  ...||||||||++|+. ++.+++|||||.........+..|+++|||.+...+. .+..|
T Consensus        77 ~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~~~v~-~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L  155 (290)
T 1fiw_A           77 PPLQERYVEKIIIHEKYSASSEANDIALMKITPPVT-CGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPML  155 (290)
T ss_dssp             TTCEEEEEEEEEECTTCBTTTTBTCCEEEEEESCCC-CBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBC
T ss_pred             CCceEEEEEEEEECCCCCCCCCCCCEEEEEECCccc-cCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCcee
Confidence            235778899999999997  4689999999999999 7888999999975433344578999999998876543 45679


Q ss_pred             eeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEec-CCcEEEEEEEeEcCCCCC--CCcccc
Q psy16044        179 RQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLK-DGRWYLAGITSFGSGYCG--VGIRYS  255 (436)
Q Consensus       179 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~-~~~~~l~GI~S~g~~~C~--~~~~y~  255 (436)
                      +++.+++++.+.|+..+.......+.||||+...+..+.|.|||||||++... +++|+|+||+|||.+|+.  .+.+|+
T Consensus       156 ~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt  235 (290)
T 1fiw_A          156 QEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYT  235 (290)
T ss_dssp             EEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEE
T ss_pred             eEEEEEEecHHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEE
Confidence            99999999999998753222345679999997777689999999999999753 689999999999988542  467999


Q ss_pred             cccceecCCccccC
Q psy16044        256 HRQPRLINGKESIR  269 (436)
Q Consensus       256 ~v~~~~~~~~~~~~  269 (436)
                      +|.+|..||.+.+.
T Consensus       236 ~V~~y~~WI~~~~~  249 (290)
T 1fiw_A          236 STWSYLNWIASKIG  249 (290)
T ss_dssp             ESGGGHHHHHHHHC
T ss_pred             EHHHhHHHHHHHhC
Confidence            99999999988775


No 13 
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=100.00  E-value=9.3e-48  Score=347.52  Aligned_cols=226  Identities=36%  Similarity=0.607  Sum_probs=190.4

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+..+      .++|+||||+++||||||||+...    ..+..+.|++|.....    ..+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAhC~~~~----~~~~~~~v~~G~~~~~----~~~~   66 (232)
T 2oq5_A            1 IVGGTEVEEGEWPWQASLQWDG------SHRCGATLINATWLVSAAHCFTTY----KNPARWTASFGVTIKP----SKMK   66 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECGGGGSSC----CCGGGEEEEESSBSTT----CSEE
T ss_pred             CCCCEECCCCCCCeeEEEEeCC------CeeEEEEEEcCCEEEECHHHcCCC----CCCceEEEEEeeEECC----CceE
Confidence            6899999999999999998643      689999999999999999999753    1245688999976432    3467


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...+|||||||++|+. ++..++|||||... .....+..++++|||.+...+..+..|+++.++
T Consensus        67 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  144 (232)
T 2oq5_A           67 RGLRRIIVHEKYKHPSHDYDISLAELSSPVP-YTNAVHRVCLPDAS-YEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVT  144 (232)
T ss_dssp             EEEEEEEECTTCCTTCCTTCCEEEEESSCCC-CCSSSCCCBCCCTT-CCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEE
T ss_pred             EeEEEEEeCCCCCCCCCCCCEEEEEecCCCc-cCCceeEeECCCcc-ccCCCCCEEEEEECCccCCCCCCCceeeEeEEE
Confidence            8899999999997  4689999999999999 78889999999853 334568899999999988766667889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccceec
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPRLI  262 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~~~  262 (436)
                      +++.+.|+..+.......+.||||+...+..++|.|||||||++...+++|+|+||+|||.+|+.  .+.+|++|.++..
T Consensus       145 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~  224 (232)
T 2oq5_A          145 LIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRD  224 (232)
T ss_dssp             EECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHH
T ss_pred             EeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHH
Confidence            99999998765433345679999998776689999999999999866789999999999987542  4679999999999


Q ss_pred             CCcccc
Q psy16044        263 NGKESI  268 (436)
Q Consensus       263 ~~~~~~  268 (436)
                      ||.+.+
T Consensus       225 WI~~~~  230 (232)
T 2oq5_A          225 WITSKT  230 (232)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998654


No 14 
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=100.00  E-value=3.5e-48  Score=351.62  Aligned_cols=232  Identities=30%  Similarity=0.589  Sum_probs=194.3

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.+|.+++|||+|+|+....   ...++|+||||+++||||||||+...    ..+..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~---~~~~~CgGtLI~~~~VLTAAHC~~~~----~~~~~~~v~~G~~~~~~~~~~~~~   73 (238)
T 3bg8_A            1 IVGGTASVRGEWPWQVTLHTTSP---TQRHLCGGSIIGNQWILTAAHCFYGV----ESPKILRVYSGILNQSEIKEDTSF   73 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEECSS---SCEEEEEEEEEETTEEEECGGGGTTC----CCGGGEEEECSCSBGGGCCTTSCC
T ss_pred             CCCCeECCCCCcCcEEEEEeecC---CCcEEEEEEEeeCCEEEECHHHCCCC----CCCceEEEEEeeccCCcCCCCceE
Confidence            78999999999999999986532   12689999999999999999999653    124568899998876654445577


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||.... ....+..|+++|||.+...+..+..|++..++
T Consensus        74 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  151 (238)
T 3bg8_A           74 FGVQEIIIHDQYKMAESGYDIALLKLETTVN-YTDSQRPISLPSKGE-RNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIP  151 (238)
T ss_dssp             EEEEEEEECTTCCCGGGSCCCEEEEESSCCC-CBTTBCCCBCCCGGG-GSSCCCCEEEEESCCSSSSCCCCSBCEEEECC
T ss_pred             EeeEEEEECCCCCCCCCCCcEEEEEECCccc-cCCCcccCCCCCCcc-CcCCCCeEEEEecCCCCCCCChhhhhcEeeEE
Confidence            8899999999998  3679999999999999 778899999998532 24567899999999988666667889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccceec
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPRLI  262 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~~~  262 (436)
                      +++.+.|+..+... ...+.||||+...+..++|.|||||||++.. +++|+|+||+|||.+|+.  .+.+|++|.+|..
T Consensus       152 ~~~~~~C~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~  229 (238)
T 3bg8_A          152 LVTNEECQKRYRGH-KITHKMICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVD  229 (238)
T ss_dssp             EECHHHHHHHCTTS-CCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred             EECHHHhhhhhcCC-CCCCCeEeecCCCCCCCcCCCCCCcceEEEE-CCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHH
Confidence            99999999887542 3567999999776668999999999999984 789999999999987543  4689999999999


Q ss_pred             CCccccC
Q psy16044        263 NGKESIR  269 (436)
Q Consensus       263 ~~~~~~~  269 (436)
                      ||.+.+.
T Consensus       230 WI~~~~~  236 (238)
T 3bg8_A          230 WILEKTQ  236 (238)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHHh
Confidence            9987653


No 15 
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=100.00  E-value=1.5e-47  Score=345.03  Aligned_cols=224  Identities=31%  Similarity=0.638  Sum_probs=185.2

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...     ..++|+||||+++||||||||+..       ...+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~-----~~~~CgGtLI~~~~VLTAAHC~~~-------~~~~~V~~G~~~~~~~~~~~~~   68 (228)
T 1fxy_A            1 IVGGYNCKDGEVPWQALLINEE-----NEGFCGGTILSEFYILTAAHCLYQ-------AKRFKVRVGDRNTEQEEGGEAV   68 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEECTT-----SCEEEEEEECSSSEEEECGGGTTS-------CSSCEEEEECSCTTTCCCCEEE
T ss_pred             CCCCEECCCCCcCcEEEEEcCC-----CCeeEEEEEeeCCEEEECHHHCCC-------CCcEEEEECccCccccCCCcEE
Confidence            6899999999999999997542     158999999999999999999853       2457899998877665556788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|++++.||+|+  ...||||||||++|+. ++.+++|||||...   ...+..++++|||.+.               
T Consensus        69 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~---~~~~~~~~v~GwG~~~---------------  129 (228)
T 1fxy_A           69 HEVEVVIKHNRFTKETYDFDIAVLRLKTPIT-FRMNVAPASLPTAP---PATGTKCLISGWGNTA---------------  129 (228)
T ss_dssp             EEEEEEEECTTCBTTTTBTCCEEEEESSCCC-CBTTBCCCCCCSSC---CCTTCEEEEEESSCCC---------------
T ss_pred             EEEEEEEECCCCCCCCCcCcEEEEEECCccc-CCCceeccCCCCCC---CCCCCEEEEEecCccC---------------
Confidence            8999999999997  4679999999999999 67789999998742   2356667777776432               


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                                                                                                      
T Consensus       130 --------------------------------------------------------------------------------  129 (228)
T 1fxy_A          130 --------------------------------------------------------------------------------  129 (228)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC-ccccceEEEEE
Q psy16044        265 KESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKLRQIRVP  343 (436)
Q Consensus       265 ~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~-~~~~l~~~~~~  343 (436)
                                                                                      .... .+..|+++.++
T Consensus       130 ----------------------------------------------------------------~~~~~~~~~l~~~~~~  145 (228)
T 1fxy_A          130 ----------------------------------------------------------------SSGADYPDELQCLDAP  145 (228)
T ss_dssp             ----------------------------------------------------------------SSSCCCCSSCEEEEEE
T ss_pred             ----------------------------------------------------------------CCCCCCCccceEEEEE
Confidence                                                                            1111 24568899999


Q ss_pred             eeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHH
Q psy16044        344 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       344 ~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~  423 (436)
                      +++.++|+..+..  .++++|||++...+..+.|.|||||||++++     +|+||+|||.+|+..+.|++||||++|++
T Consensus       146 ~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~  218 (228)
T 1fxy_A          146 VLSQAKCEASYPG--KITSNMFCVGFLEGGKDSCQGDSGGPVVCNG-----QLQGVVSWGDGCAQKNKPGVYTKVYNYVK  218 (228)
T ss_dssp             BCCHHHHHHHSTT--TCCTTEEEESCTTCSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSBTTBCEEEEEGGGGHH
T ss_pred             EeCHHHhHhhcCC--CCCCCEEEeccCCCCCccccCccccceEECC-----EEEEEEEECCCCCCCCCCEEEEEhHHHHH
Confidence            9999999988764  4688999998766667899999999999842     59999999999987778999999999999


Q ss_pred             HHHHHHhhh
Q psy16044        424 WIRKQINIA  432 (436)
Q Consensus       424 WI~~~i~~~  432 (436)
                      ||+++|+.+
T Consensus       219 WI~~~~~~~  227 (228)
T 1fxy_A          219 WIKNTIAAN  227 (228)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHhcc
Confidence            999999764


No 16 
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=100.00  E-value=9.5e-48  Score=348.53  Aligned_cols=232  Identities=32%  Similarity=0.547  Sum_probs=192.9

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.+|.+++|||+|+|+..... +. .++|+||||+++||||||||+.....  ..+..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~-~~-~~~CgGtLIs~~~VLTAAHC~~~~~~--~~~~~~~v~~G~~~~~~~~~~~~~   76 (237)
T 2f91_A            1 IVGGTDATLGEFPYQLSFQETFIG-FS-FHFCGASIYNENYAITAGHCVYGDDY--ENPSGLQIVAGELDMSVNEGSEQI   76 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETT-EE-EEEEEEEEEETTEEEECGGGTTTSCT--TSCCSEEEEESCSBTTSCCSCCEE
T ss_pred             CCCccCCCCCCCCcEEEEEEecCC-CC-cceEEEEEeeCCEEEEcHHhCCCCcc--CCcccEEEEECCeeccCCCCccEE
Confidence            789999999999999999875311 11 13499999999999999999975321  235678999999887655555688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++.+++|||||....   ..+..++++|||.+...+..+..|+++.++
T Consensus        77 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~---~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  152 (237)
T 2f91_A           77 ITVSKIILHENFDYNLLDNDISLLKLSGSLT-FNDNVAPIALPEQGH---TATGDVIVTGWGTTSEGGNTPDVLQKVTVP  152 (237)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CBTTBCCCBCCCTTC---CCCSEEEEEESCCSSTTCCCCSBCEEEEEE
T ss_pred             EEEEEEEECCCCCCCCCCCcEEEEEECCCcc-cCCceeeccCCCCCC---CCCCcEEEEECCcCCCCCCccceeeEEEEe
Confidence            8999999999997  4689999999999999 778899999997532   467889999999988777677889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccceec
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPRLI  262 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~~~  262 (436)
                      +++.+.|+..+.. ....+.|||++...+..+.|.|||||||++. .+++|+|+||+|||.+|+.  .+.+|++|.+|..
T Consensus       153 ~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~-~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~  230 (237)
T 2f91_A          153 LVSDEDCRADYGA-DEILDSMICAGVPEGGKDSCQGDSGGPLAAS-DTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVD  230 (237)
T ss_dssp             EECHHHHHHHHCT-TTSCTTEEEECCTTCCCBCCTTCTTCEEEEC-TTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHH
T ss_pred             EcCHHHhhhhhCC-CCcCCCeEEEecCCCCCCCCCCcCCCCeEEe-cCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHH
Confidence            9999999988752 2356799999977666899999999999997 5789999999999987442  3679999999999


Q ss_pred             CCcccc
Q psy16044        263 NGKESI  268 (436)
Q Consensus       263 ~~~~~~  268 (436)
                      ||.+.+
T Consensus       231 WI~~~~  236 (237)
T 2f91_A          231 WIKANA  236 (237)
T ss_dssp             HHHHHC
T ss_pred             HHHHhc
Confidence            998653


No 17 
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=100.00  E-value=1.5e-47  Score=356.29  Aligned_cols=246  Identities=28%  Similarity=0.535  Sum_probs=198.5

Q ss_pred             cCCCCCCccCCC-CCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceE
Q psy16044         11 ARDCGVGIRYSH-RQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWT   89 (436)
Q Consensus        11 ~~~CG~~~~~~~-~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~   89 (436)
                      ...||.+..... ...||+||++|..++|||+|+|+..       .++|+||||+++||||||||+...    .....+.
T Consensus        19 ~~~CG~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~-------~~~CgGsLIs~~~VLTAAHC~~~~----~~~~~~~   87 (283)
T 1yc0_A           19 RQACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYIG-------DSFCAGSLVHTCWVVSAAHCFSHS----PPRDSVS   87 (283)
T ss_dssp             --CCSCCSCC-------CBSCEECCTTSSTTEEEEEET-------TEEEEEEEEETTEEEECGGGGTTC----CCGGGEE
T ss_pred             CCCcCCcccccccCcCceECCeECCCCCCCeEEEEEcC-------CcEEEEEEeeCCEEEECHHHcCCC----CCCceEE
Confidence            357996644321 2469999999999999999999753       588999999999999999999653    1246789


Q ss_pred             EEeccccCCccCCceEEEeeeEEEeCCCCC---CCCCceeEEEeCCC----CCCCCCceeeeeecCCCCCCCCCCCcEEE
Q psy16044         90 AVLGDWDRTEEEKSEVRIPVERIRVHEEFH---NYHHDIALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVA  162 (436)
Q Consensus        90 v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~---~~~~DiAll~L~~~----~~~~~~~v~pi~l~~~~~~~~~~~~~~~~  162 (436)
                      |++|.++........+.+.|+++++||+|+   ...||||||+|++|    +. ++.+++|||||... .....+..+++
T Consensus        88 V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~~~~v~-~~~~v~picLp~~~-~~~~~g~~~~v  165 (283)
T 1yc0_A           88 VVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCAT-RSQFVQPICLPEPG-STFPAGHKCQI  165 (283)
T ss_dssp             EEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBTTBSSC-CBTTBCCCBCCCTT-CCCCTTCEEEE
T ss_pred             EEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCcccccc-ccCceeeeECCCCc-CCCCCCCEEEE
Confidence            999998877665667889999999999996   36799999999999    66 67889999999853 33457899999


Q ss_pred             EecCccCCCCC-ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEE
Q psy16044        163 TGWGRVKPKGD-LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGIT  241 (436)
Q Consensus       163 ~GwG~~~~~~~-~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~  241 (436)
                      +|||.+..... .+..|+++.+++++.+.|+..+.......+.||||+...+..+.|.|||||||++.. +++|+|+||+
T Consensus       166 ~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GIv  244 (283)
T 1yc0_A          166 AGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGII  244 (283)
T ss_dssp             EESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEE
T ss_pred             EEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEE-CCcEEEEEEE
Confidence            99998875543 467899999999999999875332234567999999876668999999999999985 7899999999


Q ss_pred             eEcCCCC--CCCcccccccceecCCccccCC
Q psy16044        242 SFGSGYC--GVGIRYSHRQPRLINGKESIRG  270 (436)
Q Consensus       242 S~g~~~C--~~~~~y~~v~~~~~~~~~~~~~  270 (436)
                      |||.+|+  +.+.+|++|.+|..||.+.+..
T Consensus       245 S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~  275 (283)
T 1yc0_A          245 SWGDGCGRLHKPGVYTRVANYVDWINDRIRP  275 (283)
T ss_dssp             EECSTTTCTTCCEEEEEGGGGHHHHHHHCC-
T ss_pred             EECCCCCCCCCCeEEEEhhhHHHHHHHHhcC
Confidence            9998743  3468999999999999887764


No 18 
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=100.00  E-value=2e-47  Score=347.66  Aligned_cols=233  Identities=33%  Similarity=0.565  Sum_probs=197.1

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCC-CCCCCcceEEEeccccCCcc-CCce
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIF-SLPIPELWTAVLGDWDRTEE-EKSE  104 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~-~~~~~~~~~v~~g~~~~~~~-~~~~  104 (436)
                      |+||++|.+++|||+|+|+....     .++|+||||+++||||||||+.+... .......+.|++|..+.... ....
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~-----~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~   75 (241)
T 3ncl_A            1 VVGGTDADEGEWPWQVSLHALGQ-----GHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGV   75 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTT-----EEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTC
T ss_pred             CCCCeECCCCCCCcEEEEEcCCC-----ceEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCc
Confidence            78999999999999999976431     48899999999999999999966421 22235678999998876654 3345


Q ss_pred             EEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        105 VRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       105 ~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.+.|+++++||+|+  ...||||||||++|+. ++..++|||||... .....+..++++|||.+...+..+..|++..
T Consensus        76 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~piclp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~  153 (241)
T 3ncl_A           76 QERRLKRIISHPFFNDFTFDYDIALLELEKPAE-YSSMVRPISLPDAS-HVFPAGKAIWVTGWGHTQYGGTGALILQKGE  153 (241)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CCSSCCCCBCCCTT-CCCCTTCEEEEEESSBSSTTSCBCSBCEEEE
T ss_pred             eEEEEEEEEECCCCCCCCCCCcEEEEEECCCCc-ccCccCceEcCCcc-cCCCCCCEEEEEEecccCCCCCcCceeeEEe
Confidence            888999999999998  4679999999999999 78889999999863 3345789999999999987777778899999


Q ss_pred             eeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccce
Q psy16044        183 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPR  260 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~  260 (436)
                      +++++.+.|+..+..  ...+.|+|++...+..++|.|||||||++...+++|+|+||+|||.+||.  .+.+|++|..|
T Consensus       154 ~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y  231 (241)
T 3ncl_A          154 IRVINQTTCENLLPQ--QITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLF  231 (241)
T ss_dssp             EEECCHHHHHHHSTT--TCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGG
T ss_pred             EEEECHHHhhhhccc--CCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHH
Confidence            999999999998764  34569999998777789999999999998877899999999999988553  46799999999


Q ss_pred             ecCCcccc
Q psy16044        261 LINGKESI  268 (436)
Q Consensus       261 ~~~~~~~~  268 (436)
                      ..||.+.+
T Consensus       232 ~~WI~~~~  239 (241)
T 3ncl_A          232 RDWIKENT  239 (241)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998754


No 19 
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=100.00  E-value=3e-47  Score=341.54  Aligned_cols=219  Identities=34%  Similarity=0.672  Sum_probs=181.2

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+.     +  .++|+||||+++||||||||+..         .+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-----~--~~~CgGsLIs~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   64 (222)
T 1hj8_A            1 IVGGYECKAYSQPHQVSLNS-----G--YHFCGGSLVNENWVVSAAHCYKS---------RVEVRLGEHNIKVTEGSEQF   64 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEES-----S--SEEEEEEEEETTEEEECGGGCCS---------SCEEEESCSBTTSCCSCCEE
T ss_pred             CCCCEECCCCCCCEEEEEEc-----C--CcEEEeEEecCCEEEECHHhcCC---------CeEEEEcccccccCCCCcEE
Confidence            68999999999999999963     1  68999999999999999999852         35799999887655556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||...   ...+..++++|||.+                
T Consensus        65 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picL~~~~---~~~~~~~~v~GwG~~----------------  124 (222)
T 1hj8_A           65 ISSSRVIRHPNYSSYNIDNDIMLIKLSKPAT-LNTYVQPVALPTSC---APAGTMCTVSGWGNT----------------  124 (222)
T ss_dssp             EEEEEEEECTTCBTTTTBSCCEEEEESSCCC-CSSSCCCCBCCSSC---CCTTCEEEEEESSCC----------------
T ss_pred             EEEEEEEECCCCCCCCCCCcEEEEEECCccc-CCCceeccCCCCCC---CCCCCEEEEEECCCC----------------
Confidence            8999999999997  4689999999999999 67789999998642   234556666666632                


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                                                                                                      
T Consensus       125 --------------------------------------------------------------------------------  124 (222)
T 1hj8_A          125 --------------------------------------------------------------------------------  124 (222)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEe
Q psy16044        265 KESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPL  344 (436)
Q Consensus       265 ~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~  344 (436)
                                                                                     ......+..|+++.+++
T Consensus       125 ---------------------------------------------------------------~~~~~~~~~L~~~~~~~  141 (222)
T 1hj8_A          125 ---------------------------------------------------------------MSSTADSNKLQCLNIPI  141 (222)
T ss_dssp             ---------------------------------------------------------------CCSSCCTTBCEEEEEEB
T ss_pred             ---------------------------------------------------------------CCCCCCCceeEEEEEEE
Confidence                                                                           22222245688999999


Q ss_pred             eCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHH
Q psy16044        345 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPW  424 (436)
Q Consensus       345 ~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~W  424 (436)
                      ++.++|+..+..  .+.+.|||++...+..+.|.|||||||+++   +  +|+||+|||.+|+..+.|++||||+.|++|
T Consensus       142 ~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~W  214 (222)
T 1hj8_A          142 LSYSDCNNSYPG--MITNAMFCAGYLEGGKDSCQGDSGGPVVCN---G--ELQGVVSWGYGCAEPGNPGVYAKVCIFNDW  214 (222)
T ss_dssp             CCHHHHHHHSTT--CCCTTEEEESCTTSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSSCTTCCEEEEEGGGGHHH
T ss_pred             cCHHHhhhhccC--CCCCCeEEeccCCCCCccCCCCcccceEEC---C--EEEEEEeecCCCCCCCcCcEEEEhHHhHHH
Confidence            999999988765  468999999876666789999999999984   2  599999999999877789999999999999


Q ss_pred             HHHHHhh
Q psy16044        425 IRKQINI  431 (436)
Q Consensus       425 I~~~i~~  431 (436)
                      |+++|+.
T Consensus       215 I~~~~~~  221 (222)
T 1hj8_A          215 LTSTMAS  221 (222)
T ss_dssp             HHHHHHC
T ss_pred             HHHHhhc
Confidence            9999864


No 20 
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=100.00  E-value=1.1e-47  Score=349.04  Aligned_cols=233  Identities=33%  Similarity=0.620  Sum_probs=195.1

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+.....   ..++|+||||+++||||||||+....    .+..+.|++|...........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~---~~~~CgGtLI~~~~VLTAAHC~~~~~----~~~~~~v~~G~~~~~~~~~~~~~   73 (241)
T 2any_A            1 IVGGTESSWGEWPWQVSLQVKLTA---QRHLCGGSLIGHQWVLTAAHCFDGLP----LQDVWRIYSGILELSDITKDTPF   73 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEESSS---EEEEEEEEEEETTEEEECGGGGSSCC----CSTTEEEECSCSBGGGCCTTSCC
T ss_pred             CCCCEECCCCCCCcEEEEEEEcCC---CceEEEEEEecCCEEEECHHHcCCCC----CCccEEEEeeeeeccccccCceE
Confidence            689999999999999999875311   26899999999999999999996531    23567899998776554445567


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||+|++|+. ++.+++|||||.... ....+..|+++|||.+...+..+..|+++.++
T Consensus        74 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  151 (241)
T 2any_A           74 SQIKEIIIHQNYKVSEGNHDIALIKLQAPLE-YTEFQKPISLPSKGD-TSTIYTNCWVTGWGFSKEKGEIQNILQKVNIP  151 (241)
T ss_dssp             BCEEEEEECTTCCTTSSSSCCEEEEESSCCC-CBTTBCCCCCCCSSC-CSTTCSEEEEEESSCSSTTCCCCSBCEEEEEE
T ss_pred             EeeEEEEECCCCCCCCCCCCeEEEEeCCccc-CCCCcceeEcCCccc-CCCCCCeEEEEecccCCCCCCcCchhheeEeE
Confidence            7899999999997  4679999999999999 788899999998533 34578899999999988766667889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccceec
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPRLI  262 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~~~  262 (436)
                      +++.+.|+..+... ...+.|||++...+..++|.|||||||++.. +++|+|+||+|||.+|+.  .+.+|++|..|..
T Consensus       152 ~~~~~~C~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~  229 (241)
T 2any_A          152 LVTNEECQKRYQDY-KITQRMVCAGYKEGGKDACKGDSGGPLVCKH-NGMWRLVGITSWGEGCARREQPGVYTKVAEYMD  229 (241)
T ss_dssp             EECHHHHHTTSCTT-CSCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred             EeCHHHhhhHhccC-CCCcCcEeecCCCCCCccCCCCCCCcEEEEE-CCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHH
Confidence            99999999887542 3567999998776668999999999999984 789999999999998543  4679999999999


Q ss_pred             CCccccCC
Q psy16044        263 NGKESIRG  270 (436)
Q Consensus       263 ~~~~~~~~  270 (436)
                      ||.+.+..
T Consensus       230 WI~~~~~~  237 (241)
T 2any_A          230 WILEKTQS  237 (241)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHHhhc
Confidence            99877653


No 21 
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=100.00  E-value=2.2e-47  Score=345.98  Aligned_cols=229  Identities=28%  Similarity=0.581  Sum_probs=194.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCcc-CCceE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEE-EKSEV  105 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~-~~~~~  105 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+.+..   ..+..+.|++|....... ....+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLI~~~~VLTAAHC~~~~~---~~~~~~~v~~g~~~~~~~~~~~~~   71 (235)
T 4dgj_A            1 IVGGSDAKEGAWPWVVGLYYDD------RLLCGASLVSSDWLVSAAHCVYGRN---LEPSKWTAILGLHMKSNLTSPQTV   71 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEECSSSEEEECHHHHTTSC---SSGGGEEEEESCCBTTCCSCTTCE
T ss_pred             CCCCccCCCCCCCcEEEEeeCC------CeEEEEEEeeCCEEEECHHhcCCCC---CCCccEEEEEeeecccccCCCcee
Confidence            6899999999999999998743      6899999999999999999996532   235678899998765432 33456


Q ss_pred             EEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        106 RIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       106 ~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      .+.|+++++||+|+  ...||||||||++|+. ++..++|||||... .....+..++++|||.+...+..+..|++..+
T Consensus        72 ~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~  149 (235)
T 4dgj_A           72 PRLIDEIVINPHYNRRRKDNDIAMMHLEFKVN-YTDYIQPISLPEEN-QVFPPGRNCSIAGWGTVVYQGTTADILQEADV  149 (235)
T ss_dssp             EEEEEEEEECTTCBTTTTBTCCEEEEESSCCC-CBTTBCCCBCCCTT-CCCCTTCEEEEEESSBSSTTCCBCSBCEEEEE
T ss_pred             EEeEEEEEECCCCCCCCCCCeEEEEEECCccc-cCCcccccCCCCcc-cCCCCCCEEEEEecccCCCCCccchhheEeEe
Confidence            77899999999997  4679999999999999 78889999999863 33457899999999998877777888999999


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCccccccccee
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIRYSHRQPRL  261 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~y~~v~~~~  261 (436)
                      ++++.+.|+..+.. ...++.||||+...+..+.|.|||||||++.. +++|+|+||+|||.+|+  +.+.+|++|.+|.
T Consensus       150 ~~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~  227 (235)
T 4dgj_A          150 PLLSNERCQQQMPE-YNITENMICAGYEEGGIDSCQGDSGGPLMCQE-NNRWFLAGVTSFGYECALPNRPGVYARVSRFT  227 (235)
T ss_dssp             EEECHHHHHHHCTT-SCCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGTH
T ss_pred             eecCHHHhhhhccC-ccCCCCeEeecCCCCCCccCCCCCCCeEEEEE-CCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHH
Confidence            99999999998754 24567999999877778999999999999984 78999999999998855  3468999999999


Q ss_pred             cCCcccc
Q psy16044        262 INGKESI  268 (436)
Q Consensus       262 ~~~~~~~  268 (436)
                      .||++.+
T Consensus       228 ~WI~~~i  234 (235)
T 4dgj_A          228 EWIQSFL  234 (235)
T ss_dssp             HHHHTTC
T ss_pred             HHHHHHh
Confidence            9998765


No 22 
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=100.00  E-value=1.4e-47  Score=347.98  Aligned_cols=230  Identities=27%  Similarity=0.525  Sum_probs=194.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.+|.+++|||+|+|+....    ..++|+||||+++||||||||+...     .+..+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~----~~~~CgGtLIs~~~VLTAAHC~~~~-----~~~~~~v~~G~~~~~~~~~~~~~   71 (238)
T 1ym0_A            1 IVGGIEARPYEFPWQVSVRRKSS----DSHFCGGSIINDRWVVCAAHCMQGE-----APALVSLVVGEHDSSAASTVRQT   71 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEEGGG----TEEEEEEEEEETTEEEECHHHHTTC-----CGGGEEEEESCSBTTSCCSSCEE
T ss_pred             CCCCEECCCCccCCEEEEEeCCC----CceEEEEEEeeCCEEEECHHhCCCC-----CCceEEEEEcccccCCCCCCceE
Confidence            68999999999999999987531    2689999999999999999999663     34678999999887766556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCc-cccceeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDL-VSKLRQIRV  183 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~-~~~l~~~~~  183 (436)
                      +.|+++++||+|+  ...+|||||||++|+. ++..++|||||..... . .+..++++|||.+...+.. +..|++..+
T Consensus        72 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picLp~~~~~-~-~~~~~~~~GwG~~~~~~~~~~~~l~~~~~  148 (238)
T 1ym0_A           72 HDVDSIFVNENYDPATLENDVSVIKTAVAIT-FDINVGPICAPDPAND-Y-VYRKSQCSGWGTINSGGVCCPAVLRYVTL  148 (238)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CSSSCCCCBCCCTTCC-C-TTCEEEEEESCCSSTTCCSCCSBCEEEEE
T ss_pred             EEEEEEEECCCCCCCCCcccEEEEEeCCCcc-ccCcccccCCCCCcCC-C-CCCceEEEeecCCCCCCCcCCccceEEEE
Confidence            9999999999998  4689999999999999 7888999999985432 2 6789999999998766554 678999999


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCC--CCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC-CCCcccccccce
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGF--SGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC-GVGIRYSHRQPR  260 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~--~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C-~~~~~y~~v~~~  260 (436)
                      ++++.+.|+..+... ...+.|||++...+.  .+.|.|||||||++...+++|+|+||+|||.+|. +.+.+|++|..|
T Consensus       149 ~~~~~~~C~~~~~~~-~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~  227 (238)
T 1ym0_A          149 NITTNAFCDAVYTSD-TIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPGVYSRVGFH  227 (238)
T ss_dssp             EECCHHHHHHHCTTS-CCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSSSSSCEEEEEHHHH
T ss_pred             EeeCHHHHhHhhccc-ccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCCCCCCcEEEEHHHh
Confidence            999999999887542 356799999876554  7899999999999986578999999999998733 346799999999


Q ss_pred             ecCCccccC
Q psy16044        261 LINGKESIR  269 (436)
Q Consensus       261 ~~~~~~~~~  269 (436)
                      ..||.+.+.
T Consensus       228 ~~WI~~~i~  236 (238)
T 1ym0_A          228 AGWITDTIT  236 (238)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999987653


No 23 
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=100.00  E-value=5e-47  Score=340.29  Aligned_cols=219  Identities=32%  Similarity=0.607  Sum_probs=179.9

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+..+      .++|+||||+++||||||||+..         .+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   65 (223)
T 1lo6_A            1 LVHGGPCDKTSHPYQAALYTSG------HLLCGGVLIHPLWVLTAAHCKKP---------NLQVFLGKHNLRQRESSQEQ   65 (223)
T ss_dssp             CBSCEECCTTSCTTEEEEEETT------EEEEEEEEEETTEEEECGGGCCT---------TCEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCCCCEEEEecCC------CEEEEeEEecCCEEEECccCCCC---------CeEEEEcceecCCCCCCcEE
Confidence            6899999999999999997532      68999999999999999999742         36899999887665556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|.++++||+|+  ...||||||||++|+. ++..++|||||...   ...+..++++|||                  
T Consensus        66 ~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~-~~~~v~pi~l~~~~---~~~~~~~~v~GwG------------------  123 (223)
T 1lo6_A           66 SSVVRAVIHPDYDAASHDQDIMLLRLARPAK-LSELIQPLPLERDC---SANTTSCHILGWG------------------  123 (223)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CBTTBCCCCBCCCT---TCCCCEEEEEESS------------------
T ss_pred             EEEEEEEECCCCCCCCCcCeEEEEEECCccc-CCCceeecccCCCC---CCCCCEEEEEEEC------------------
Confidence            8999999999997  4689999999999998 67788999987642   1234555555555                  


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                                                                                                      
T Consensus       124 --------------------------------------------------------------------------------  123 (223)
T 1lo6_A          124 --------------------------------------------------------------------------------  123 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEe
Q psy16044        265 KESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPL  344 (436)
Q Consensus       265 ~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~  344 (436)
                                                                                   .+. ....+..|+++.+++
T Consensus       124 -------------------------------------------------------------~~~-~~~~~~~l~~~~~~~  141 (223)
T 1lo6_A          124 -------------------------------------------------------------KTA-DGDFPDTIQCAYIHL  141 (223)
T ss_dssp             -------------------------------------------------------------CCT-TSSCCSBCEEEEEEE
T ss_pred             -------------------------------------------------------------CCC-CCCcCceeeEEEEEE
Confidence                                                                         332 222355688999999


Q ss_pred             eCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccHH
Q psy16044        345 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       345 ~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~~  423 (436)
                      ++.++|+..+..  .++++|||++......+.|.|||||||+++   +  +|+||+||| ..|+..+.|++||||+.|++
T Consensus       142 ~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~  214 (223)
T 1lo6_A          142 VSREECEHAYPG--QITQNMLCAGDEKYGKDSCQGDSGGPLVCG---D--HLRGLVSWGNIPCGSKEKPGVYTNVCRYTN  214 (223)
T ss_dssp             ECHHHHHHHSTT--TCCTTEEEEECTTTCCBCCTTTTTCEEEET---T--EEEEEEEECCSSCCCSSSCEEEEEGGGGHH
T ss_pred             eCHHHhhhhhCC--CCCCCeEEeecCCCCCeeccccCCCcEEeC---C--EEEEEEeeCCCCCCCCCCCcEEEEHHHHHH
Confidence            999999988765  468999999876656789999999999994   2  599999999 68987778999999999999


Q ss_pred             HHHHHHhh
Q psy16044        424 WIRKQINI  431 (436)
Q Consensus       424 WI~~~i~~  431 (436)
                      ||+++|+.
T Consensus       215 WI~~~i~~  222 (223)
T 1lo6_A          215 WIQKTIQA  222 (223)
T ss_dssp             HHHHHHC-
T ss_pred             HHHHHhcc
Confidence            99999975


No 24 
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=100.00  E-value=5.2e-47  Score=340.16  Aligned_cols=220  Identities=35%  Similarity=0.667  Sum_probs=181.4

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.+|.+++|||+|+|+ ..      .++|+||||+++||||||||+.         ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~-~~------~~~CgGsLIs~~~VLTAAHC~~---------~~~~v~~G~~~~~~~~~~~~~   64 (223)
T 3mfj_A            1 IVGGYTCGANTVPYQVSLN-SG------YHFCGGSLINSQWVVSAAHCYK---------SGIQVRLGEDNINVVEGNEQF   64 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-SS------SEEEEEEEEETTEEEECGGGCC---------SSCEEEESCSSTTSCCSCCEE
T ss_pred             CCCCEECCCCcCCEEEEEE-cC------CeEEEEEEecCCEEEEhHHhcC---------CCcEEEECCceecccCCCcEE
Confidence            6899999999999999994 21      6899999999999999999983         246799999877655556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|.++++||+|+  ...||||||||++|+. ++.+++|||||...   ...+..++++|||.+..              
T Consensus        65 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picL~~~~---~~~~~~~~v~GwG~~~~--------------  126 (223)
T 3mfj_A           65 ISASKSIVHPSYNSNTLNNDIMLIKLKSAAS-LNSRVASISLPTSC---ASAGTQCLISGWGNTKS--------------  126 (223)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CBTTBCCCBCCSSC---CCTTCEEEEEESSCCCS--------------
T ss_pred             EEeeEEEECCCCCCCCCCCCEEEEEeCCCcc-cCCcEeeeECCCCC---CCCCCEEEEEeeeccCC--------------
Confidence            8999999999997  4689999999999999 67789999998742   23456667777764320              


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                                                                                                      
T Consensus       127 --------------------------------------------------------------------------------  126 (223)
T 3mfj_A          127 --------------------------------------------------------------------------------  126 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEe
Q psy16044        265 KESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPL  344 (436)
Q Consensus       265 ~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~  344 (436)
                                                                                      .....+..|+++.+++
T Consensus       127 ----------------------------------------------------------------~~~~~~~~L~~~~~~~  142 (223)
T 3mfj_A          127 ----------------------------------------------------------------SGTSYPDVLKCLKAPI  142 (223)
T ss_dssp             ----------------------------------------------------------------SSCCCCSSCEEEEEEB
T ss_pred             ----------------------------------------------------------------CCCcccchheEEEEEE
Confidence                                                                            0111245688999999


Q ss_pred             eCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHH
Q psy16044        345 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPW  424 (436)
Q Consensus       345 ~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~W  424 (436)
                      ++.++|+..+..  .+.++|||++...+..+.|.|||||||+++   +  .|+||+|||.+|+..+.|++||||++|++|
T Consensus       143 ~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~C~~~~~p~vyt~V~~~~~W  215 (223)
T 3mfj_A          143 LSDSSCKSAYPG--QITSNMFCAGYLEGGKDSCQGDSGGPVVCS---G--KLQGIVSWGSGCAQKNKPGVYTKVCNYVSW  215 (223)
T ss_dssp             CCHHHHHHHSTT--TCCTTEEEESCTTSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSSBTTBCEEEEEGGGGHHH
T ss_pred             eCHHHhhhhhcC--cCCCCEEEccCCCCCCCcCCCCcccceEEC---C--EEEEEEEECCCCCCCCCCeEEEEHHHhHHH
Confidence            999999988754  468999999876666789999999999994   2  499999999999877789999999999999


Q ss_pred             HHHHHhh
Q psy16044        425 IRKQINI  431 (436)
Q Consensus       425 I~~~i~~  431 (436)
                      |+++|+.
T Consensus       216 I~~~i~~  222 (223)
T 3mfj_A          216 IKQTIAS  222 (223)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            9999975


No 25 
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=100.00  E-value=2.2e-47  Score=367.73  Aligned_cols=244  Identities=30%  Similarity=0.571  Sum_probs=197.2

Q ss_pred             CCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEE
Q psy16044         12 RDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAV   91 (436)
Q Consensus        12 ~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~   91 (436)
                      ..||++.   ....||+||.+|..++|||+|+|+...      .++|+||||+++||||||||+....   .....+.|+
T Consensus       106 ~~Cg~~~---~~~~rIvgG~~a~~~~~Pw~v~l~~~~------~~~CgGsLIs~~~VLTAAHCv~~~~---~~~~~~~V~  173 (372)
T 1z8g_A          106 QDCGRRK---LPVDRIVGGRDTSLGRWPWQVSLRYDG------AHLCGGSLLSGDWVLTAAHCFPERN---RVLSRWRVF  173 (372)
T ss_dssp             CCCSCCC---CC---CBSCEECCTTSSTTEEEEEETT------EEEEEEEESSSSEEEECGGGCCGGG---CCGGGEEEE
T ss_pred             cccCCcC---CCCCceECCEECCCCCCCcEEEEEeCC------ceEEEEEEecCCEEEEChhhcCCCC---CccceEEEE
Confidence            3578542   245799999999999999999998642      6899999999999999999995321   134668999


Q ss_pred             eccccCCccCCceEEEeeeEEEeCCCC------C--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEE
Q psy16044         92 LGDWDRTEEEKSEVRIPVERIRVHEEF------H--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVAT  163 (436)
Q Consensus        92 ~g~~~~~~~~~~~~~~~v~~i~~hp~y------~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~  163 (436)
                      +|..+....  ..+.+.|+++++||+|      +  ...||||||||++|+. ++.+++|||||... ..+..+..|+++
T Consensus       174 ~G~~~~~~~--~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL~~pv~-~~~~v~PicLp~~~-~~~~~g~~~~v~  249 (372)
T 1z8g_A          174 AGAVAQASP--HGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLP-LTEYIQPVCLPAAG-QALVDGKICTVT  249 (372)
T ss_dssp             ESCSBTTCT--TSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEESSCCC-CCSSCCCCBCCCTT-CCCCTTCEEEEE
T ss_pred             EeeEeccCC--CCcEEEEEEEEECCCccccccCCCCCCCccEEEEEECCCCC-CCCceeccccCCcc-cCCCCCCEEEEE
Confidence            998766543  2356899999999999      4  4679999999999999 78889999999853 334568899999


Q ss_pred             ecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEec---CCcEEEEEE
Q psy16044        164 GWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLK---DGRWYLAGI  240 (436)
Q Consensus       164 GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~---~~~~~l~GI  240 (436)
                      |||.+...+..+..|+++.+++++.+.|+.........++.||||+...+..++|+|||||||++...   +++|+|+||
T Consensus       250 GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGI  329 (372)
T 1z8g_A          250 GWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGI  329 (372)
T ss_dssp             ESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEE
T ss_pred             ecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEE
Confidence            99999876677788999999999999998753222345679999998777789999999999999753   388999999


Q ss_pred             EeEcCCCC--CCCcccccccceecCCccccCCC
Q psy16044        241 TSFGSGYC--GVGIRYSHRQPRLINGKESIRGA  271 (436)
Q Consensus       241 ~S~g~~~C--~~~~~y~~v~~~~~~~~~~~~~~  271 (436)
                      +|||.+|+  +.+.+|++|..|..||.+.+...
T Consensus       330 vS~G~~C~~~~~p~vyt~V~~y~~WI~~~i~~~  362 (372)
T 1z8g_A          330 VSWGTGCALAQKPGVYTKVSDFREWIFQAIKTH  362 (372)
T ss_dssp             EEEBSSSSCTTCCEEEEEGGGGHHHHHHHHHHT
T ss_pred             EEeCCCCCCCCCCeEEEEHHHHHHHHHHHHhcc
Confidence            99998743  24689999999999998877543


No 26 
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=100.00  E-value=3.1e-47  Score=348.63  Aligned_cols=235  Identities=31%  Similarity=0.503  Sum_probs=191.9

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||..|..++|||+|+|+..........++|+||||+++||||||||+...    ..+..+.|++|...........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~----~~~~~~~V~~G~~~~~~~~~~~~~   76 (252)
T 1rtf_B            1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQER----FPPHHLTVILGRTYRVVPGEEEQK   76 (252)
T ss_dssp             CBSSEECCGGGSTTEEEEEEEC----CEEEEEEEEECSSSEEEECGGGGTTC----CCGGGEEEEESCSBSSSCCTTCEE
T ss_pred             CCCCeECCCCCcCCEEEEEEecCCCCCCCEEEEEEEEeCCEEEECHHHCCCC----CCcccEEEEeCcccccCCCCcceE
Confidence            6899999999999999998754222222689999999999999999999653    134678999998877665556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCC----CCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCC-Cccccce
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLR  179 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~----~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~-~~~~~l~  179 (436)
                      +.|+++++||+|+  ...||||||+|++|    +. ++..++|||||... .....+..++++|||.+.... ..+..|+
T Consensus        77 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~  154 (252)
T 1rtf_B           77 FEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQ-ESSVVRTVCLPPAD-LQLPDWTECELSGYGKHEALSPFYSERLK  154 (252)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEECCSSSCCSC-CBTTBCCCBCCCTT-CCCCTTCEEEEEESCCSSTTCSSCCSBCE
T ss_pred             EEEEEEEeCCCCCcCCCCCCEEEEEECCccccccc-cCCceeceeCCCcc-ccCCCCCEEEEEEcCCCCCCCccccchhe
Confidence            9999999999997  46899999999999    77 67889999999853 334567899999999887544 3467899


Q ss_pred             eeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCC------CCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CC
Q psy16044        180 QIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGF------SGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VG  251 (436)
Q Consensus       180 ~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~------~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~  251 (436)
                      +..+++++.+.|+..+.......+.|||++...+.      .++|.|||||||++.. +++|+|+||+|||.+|+.  .+
T Consensus       155 ~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p  233 (252)
T 1rtf_B          155 EAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLN-DGRMTLVGIISWGLGCGQKDVP  233 (252)
T ss_dssp             EEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCC
T ss_pred             EeeeEEecHHHhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEe-CCcEEEEEEEEEcCCCCCCCCC
Confidence            99999999999998764444566799999876544      7899999999999974 789999999999987432  36


Q ss_pred             cccccccceecCCcccc
Q psy16044        252 IRYSHRQPRLINGKESI  268 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~  268 (436)
                      .+|++|..|..||.+.+
T Consensus       234 ~vyt~V~~y~~WI~~~~  250 (252)
T 1rtf_B          234 GVYTKVTNYLDWIRDNM  250 (252)
T ss_dssp             EEEEEGGGGHHHHHHHC
T ss_pred             eEEEEHHHHHHHHHHhc
Confidence            79999999999998765


No 27 
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=100.00  E-value=2.5e-48  Score=368.08  Aligned_cols=244  Identities=25%  Similarity=0.427  Sum_probs=192.6

Q ss_pred             CCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEE
Q psy16044         12 RDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAV   91 (436)
Q Consensus        12 ~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~   91 (436)
                      +.||+.........||+||++|..++|||+|+|..        .++|+||||+++||||||||+............+.|+
T Consensus        75 ~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~--------~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~  146 (329)
T 1md8_A           75 PVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNI--------HGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVF  146 (329)
T ss_dssp             ECCSCCSSCCCCC--CBSCCBCCTTSCTTEEEEES--------SSEEEEEEETTTEEEECGGGTSCTTC-----CCCCEE
T ss_pred             CCCCCCCCcccccccccCCEECCCCCCCCeEeecc--------CCCcceEEecCCEEEecCCEEEeCCcccCCCceEEEE
Confidence            46997655555678999999999999999999864        3469999999999999999997432222234567899


Q ss_pred             eccccCCccCCceEEEeeeEEEeCCCCC-----CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecC
Q psy16044         92 LGDWDRTEEEKSEVRIPVERIRVHEEFH-----NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWG  166 (436)
Q Consensus        92 ~g~~~~~~~~~~~~~~~v~~i~~hp~y~-----~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG  166 (436)
                      +|..+..... ..+.+.|+++++||+|+     ...||||||||++|+. ++.+++|||||... .....+..++++|||
T Consensus       147 ~G~~~~~~~~-~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L~~~v~-~~~~v~PicLp~~~-~~~~~g~~~~v~GWG  223 (329)
T 1md8_A          147 LGHTNVEELM-KLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVT-LGPNLLPICLPDND-TFYDLGLMGYVSGFG  223 (329)
T ss_dssp             ESCSBHHHHH-HHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEESSCCC-CBTTBCCCBCCCSG-GGGCTTCEEEEEECC
T ss_pred             eccccccccc-cccceeeEEEEECCCcccccCCCCCccEEEEEECCccc-CCCceEccccCCCc-cccCCCCEEEEEeCC
Confidence            9987543211 12356799999999997     3578999999999999 78889999999753 223467899999999


Q ss_pred             ccCCCCCccccceeeeeeccchhhhhhhcCC---CcCCcCCeEEeccCCCCCCCccCCCCCeeeeEe-cCCcEEEEEEEe
Q psy16044        167 RVKPKGDLVSKLRQIRVPLHNISVCRDKYGD---SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITS  242 (436)
Q Consensus       167 ~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~-~~~~~~l~GI~S  242 (436)
                      .+...  .+..|+++.+++++.+.|+..+..   ....+++||||+...+..++|.|||||||++.. .+++|+|+||+|
T Consensus       224 ~t~~~--~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS  301 (329)
T 1md8_A          224 VMEEK--IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVS  301 (329)
T ss_dssp             BCSSS--BCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEE
T ss_pred             CCCCC--CCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEE
Confidence            88643  567899999999999999987632   123567999999876668999999999999963 467999999999


Q ss_pred             EcCCCCCCCcccccccceecCCcccc
Q psy16044        243 FGSGYCGVGIRYSHRQPRLINGKESI  268 (436)
Q Consensus       243 ~g~~~C~~~~~y~~v~~~~~~~~~~~  268 (436)
                      ||.+|...+.+|++|..|..||.+.+
T Consensus       302 ~G~~C~~~~gvyT~V~~y~~WI~~~i  327 (329)
T 1md8_A          302 WGIGCSRGYGFYTKVLNYVDWIKKEM  327 (329)
T ss_dssp             ECSSSSSSCEEEEEGGGTHHHHHHHH
T ss_pred             ECCCcCCCCcEEEEHHHHHHHHHHHH
Confidence            99984445789999999999998754


No 28 
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=100.00  E-value=1.3e-47  Score=351.46  Aligned_cols=232  Identities=30%  Similarity=0.525  Sum_probs=195.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+...      .++|+||||+++||||||||+....    ....+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~~~----~~~~~~v~~G~~~~~~~~~~~~~   70 (254)
T 2bz6_H            1 IVGGKVCPKGECPWQVLLLVNG------AQLCGGTLINTIWVVSAAHCFDKIK----NWRNLIAVLGEHDLSEHDGDEQS   70 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEECSSSEEEECGGGGTTCS----CGGGEEEEESCCBTTCCCSCCEE
T ss_pred             CCCCEECCCCCcCCEEEEEeCC------CcEEEEEEecCCEEEECHHHcCCCC----CcceEEEEECCcccCCCCCCcEE
Confidence            7899999999999999998432      6899999999999999999997531    23568999999887766556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCC--CCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKR--PVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~--~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.|.++++||+|+  ...||||||||++|+. ++.+++|||||.....  ....+..++++|||.+...+..+..|++..
T Consensus        71 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~  149 (254)
T 2bz6_H           71 RRVAQVIIPSTYVPGTTNHDIALLRLHQPVV-LTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLN  149 (254)
T ss_dssp             EEEEEEEEETTCCTTSCSSCCEEEEESSCCC-CBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEE
T ss_pred             EEEEEEEECCCCCCCCCcCcEEEEEECCccc-cCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeee
Confidence            9999999999997  4689999999999999 7888999999974211  234578899999999887666778899999


Q ss_pred             eeccchhhhhhhcCCC---cCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCcccccc
Q psy16044        183 VPLHNISVCRDKYGDS---VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIRYSHR  257 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~---~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~y~~v  257 (436)
                      +.+++.++|...+...   ....+.||||+...+..++|.|||||||++. .+++|+|+||+|||.+|+  +.+.+|++|
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~-~~g~~~l~GI~S~g~~C~~~~~p~vyt~V  228 (254)
T 2bz6_H          150 VPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATH-YRGTWYLTGIVSWGQGCATVGHFGVYTRV  228 (254)
T ss_dssp             EEEECHHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEE-ETTEEEEEEEEEECSSSSCTTCCEEEEEG
T ss_pred             eeeecHHHHhhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEe-ECCEEEEEEEEEECCCCCCCCCCeEEEEH
Confidence            9999999999887542   2456799999877666899999999999997 478999999999998844  246799999


Q ss_pred             cceecCCccccCC
Q psy16044        258 QPRLINGKESIRG  270 (436)
Q Consensus       258 ~~~~~~~~~~~~~  270 (436)
                      ..|..||.+.+..
T Consensus       229 ~~~~~WI~~~~~~  241 (254)
T 2bz6_H          229 SQYIEWLQKLMRS  241 (254)
T ss_dssp             GGGHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999987764


No 29 
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=100.00  E-value=9.7e-47  Score=341.98  Aligned_cols=221  Identities=34%  Similarity=0.613  Sum_probs=172.3

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+...         ..|++|...........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGsLIs~~~VLTAAHC~~~~---------~~v~~G~~~~~~~~~~~~~   65 (237)
T 2zch_P            1 IVGGWECEKHSQPWQVLVASRG------RAVCGGVLVHPQWVLTAAHCIRNK---------SVILLGRHSLFHPEDTGQV   65 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEESSS------SEEEEEEEEETTEEEECGGGCCSS---------CEEEESCSBSSSCCTTCEE
T ss_pred             CCCCEECCCCCCCCEEEEeeCC------CeEEEEEEecCCEEEEcHHhcCCC---------ceEEEecccccCCCCCcEE
Confidence            7899999999999999997542      689999999999999999998642         3688998877665556688


Q ss_pred             EeeeEEEeCCCCCC--C-----------CCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC
Q psy16044        107 IPVERIRVHEEFHN--Y-----------HHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD  173 (436)
Q Consensus       107 ~~v~~i~~hp~y~~--~-----------~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~  173 (436)
                      +.|+++++||+|+.  .           .+|||||||++|+. ++..++|||||...   .                   
T Consensus        66 ~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~-~~~~v~pi~Lp~~~---~-------------------  122 (237)
T 2zch_P           66 FQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAE-LTDAVKVMDLPTQE---P-------------------  122 (237)
T ss_dssp             EEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEEEEESSCCC-CCSSCCCCCCCSSC---C-------------------
T ss_pred             EEEEEEecCCCcchhhhcccccccCCCCCcceEEEEeCCCCc-cCCcEeeeECCCCC---C-------------------
Confidence            99999999999963  1           45666666666665 44555666665421   1                   


Q ss_pred             ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcc
Q psy16044        174 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIR  253 (436)
Q Consensus       174 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~  253 (436)
                                                                                                      
T Consensus       123 --------------------------------------------------------------------------------  122 (237)
T 2zch_P          123 --------------------------------------------------------------------------------  122 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC-
Q psy16044        254 YSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-  332 (436)
Q Consensus       254 y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~-  332 (436)
                                                                                  ..++.|+++|||.+..... 
T Consensus       123 ------------------------------------------------------------~~~~~~~v~GwG~~~~~~~~  142 (237)
T 2zch_P          123 ------------------------------------------------------------ALGTTCYASGWGSIEPEEFL  142 (237)
T ss_dssp             ------------------------------------------------------------CTTCEEEEEESCCSSSSSCC
T ss_pred             ------------------------------------------------------------CCCCEEEEEeCCccCCCCCc
Confidence                                                                        2334455555554433222 


Q ss_pred             ccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC-CCCCCCC
Q psy16044        333 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GCAKSGY  411 (436)
Q Consensus       333 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~-~c~~~~~  411 (436)
                      .+..|+++.+++++.++|++.+..  .+++.|||++...+..+.|.|||||||+++.     +|+||+|||. +|+..+.
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~  215 (237)
T 2zch_P          143 TPKKLQCVDLHVISNDVCAQVHPQ--KVTKFMLCAGRWTGGKSTCSGDSGGPLVCNG-----VLQGITSWGSEPCALPER  215 (237)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSS--BCCTTEEEEECTTCSCBCCTTCTTCEEESSS-----SEEEEEEECCSSTTCTTC
T ss_pred             CCcccEEeEEEEeCHHHhcccccC--CCCceEEeecCCCCCCcccCCCccCeEEECC-----EEEEEEEeCcCCCCCCCC
Confidence            256789999999999999988754  4688999998766667999999999999953     5999999998 7987778


Q ss_pred             CeEEEeCcccHHHHHHHHhhh
Q psy16044        412 PDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       412 p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      |++||||++|++||+++|+.+
T Consensus       216 p~vyt~V~~~~~WI~~~i~~~  236 (237)
T 2zch_P          216 PSLYTKVVHYRKWIKDTIVAN  236 (237)
T ss_dssp             CEEEEEGGGGHHHHHHHHHTC
T ss_pred             CcEEEEHHHHHHHHHHHHhcC
Confidence            999999999999999999753


No 30 
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=100.00  E-value=5.3e-47  Score=349.06  Aligned_cols=230  Identities=31%  Similarity=0.604  Sum_probs=195.4

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+...      .++|+||||+++||||||||+...    .....+.|++|...........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLI~~~~VLTAAhC~~~~----~~~~~~~v~~g~~~~~~~~~~~~~   70 (261)
T 3gyl_B            1 ITGGSSAVAGQWPWQVSITYEG------VHVCGGSLVSEQWVLSAAHCFPSE----HHKEAYEVKLGAHQLDSYSEDAKV   70 (261)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEECSSSEEEECGGGSCTT----SCGGGEEEEESCSBTTSCCSSCEE
T ss_pred             CCCCcCCCCCCCCcEEEEeeCC------ceEEEEEEEcCCEEEECHHHCCCC----CCcccEEEEeCceeccCCCCCceE
Confidence            7899999999999999998643      689999999999999999999643    234668999999888776666788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCc--cccceeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDL--VSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~--~~~l~~~~  182 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++.+++|||||... .....+..|+++|||.+......  +..|+++.
T Consensus        71 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~  148 (261)
T 3gyl_B           71 STLKDIIPHPSYLQEGSQGDIALLQLSRPIT-FSRYIRPISLPAAQ-ASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLE  148 (261)
T ss_dssp             ECEEEEEECTTCCSTTCSCCCEEEEESSCCC-CBTTBCCCBCCCTT-CCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEE
T ss_pred             EEEEEEEECCCcCCCCCCCcEEEEEECCCcc-CCCceeccCCCCcc-cCCCCCCEEEEEecCCCCCCCCccCCccceEEE
Confidence            9999999999997  4689999999999999 78889999999853 33557889999999988755433  67899999


Q ss_pred             eeccchhhhhhhcCCC------cCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCccc
Q psy16044        183 VPLHNISVCRDKYGDS------VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIRY  254 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~------~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~y  254 (436)
                      +.+++.+.|+..+...      ....+.|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+  +.+.+|
T Consensus       149 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~lvGI~S~g~~c~~~~~p~vy  227 (261)
T 3gyl_B          149 VPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPV-EGLWYLTGIVSWGDACGARNRPGVY  227 (261)
T ss_dssp             EEEECHHHHHHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEE-TTEEEEEEEECCCCCSSCTTCCEEE
T ss_pred             EEEECHHHhhhhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEe-CCEEEEEEEEecCCCCCCCCCCCEE
Confidence            9999999999887521      23567999999777778999999999999974 78999999999998754  346799


Q ss_pred             ccccceecCCccccC
Q psy16044        255 SHRQPRLINGKESIR  269 (436)
Q Consensus       255 ~~v~~~~~~~~~~~~  269 (436)
                      ++|..|..||.+.+.
T Consensus       228 t~v~~~~~WI~~~i~  242 (261)
T 3gyl_B          228 TLASSYASWIQSKVT  242 (261)
T ss_dssp             EEGGGGHHHHHHHHH
T ss_pred             EEHHHhHHHHHHHHh
Confidence            999999999987765


No 31 
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.5e-46  Score=340.99  Aligned_cols=222  Identities=31%  Similarity=0.646  Sum_probs=172.9

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+.+         .+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGsLIs~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   65 (238)
T 1spj_A            1 IVGGWECEQHSQPWQAALYHFS------TFQCGGILVHRQWVLTAAHCISD---------NYQLWLGRHNLFDDENTAQF   65 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECGGGCCS---------SEEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCCCcEEEEEeCC------CeeEEEEEecCCEEEEcHHhCCC---------CceEEEEeccccCCCCCceE
Confidence            6899999999999999998642      58999999999999999999853         36899999887666566788


Q ss_pred             EeeeEEEeCCCCC-------------CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC
Q psy16044        107 IPVERIRVHEEFH-------------NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD  173 (436)
Q Consensus       107 ~~v~~i~~hp~y~-------------~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~  173 (436)
                      +.|+++++||+|+             ...+|||||||++|+..++..++|+|||.                         
T Consensus        66 ~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~-------------------------  120 (238)
T 1spj_A           66 VHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPT-------------------------  120 (238)
T ss_dssp             ECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCS-------------------------
T ss_pred             EEEEEEEcCCCccccccccccccccccCCCCeEEEEECccccccCCceeeccCCC-------------------------
Confidence            8999999999996             23456666666665542344455555554                         


Q ss_pred             ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcc
Q psy16044        174 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIR  253 (436)
Q Consensus       174 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~  253 (436)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (238)
T 1spj_A          121 --------------------------------------------------------------------------------  120 (238)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC-C
Q psy16044        254 YSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-D  332 (436)
Q Consensus       254 y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~-~  332 (436)
                                                                            ...   ..+..|+++|||.+.... .
T Consensus       121 ------------------------------------------------------~~~---~~~~~~~v~GwG~~~~~~~~  143 (238)
T 1spj_A          121 ------------------------------------------------------EEP---EVGSTCLASGWGSIEPENFS  143 (238)
T ss_dssp             ------------------------------------------------------SCC---CTTCEEEEEESSCSSSSSCC
T ss_pred             ------------------------------------------------------CCC---CCCCEEEEEecCCCCCCCCC
Confidence                                                                  221   234445555555443322 2


Q ss_pred             ccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCC
Q psy16044        333 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGY  411 (436)
Q Consensus       333 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~  411 (436)
                      .+..|+++.+++++.++|+..+..  .+++.|||++...+..+.|.|||||||+++.     +|+||+||| ..|+..+.
T Consensus       144 ~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~  216 (238)
T 1spj_A          144 FPDDLQCVDLKILPNDECKKAHVQ--KVTDFMLCVGHLEGGKDTCVGDSGGPLMCDG-----VLQGVTSWGYVPCGTPNK  216 (238)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSS--CCCTTEEEEECTTCSSBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTC
T ss_pred             CcCcccEEEEeecCHHHhhhhccC--CCCCCeEEeeCCCCCCCCCCCCCCCcEEEcC-----EEEEEEEeCCCCCCCCCC
Confidence            356799999999999999988754  4689999998766667999999999999842     799999999 68987778


Q ss_pred             CeEEEeCcccHHHHHHHHhhh
Q psy16044        412 PDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       412 p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      |++||||++|++||+++|+++
T Consensus       217 p~vyt~V~~y~~WI~~~i~~~  237 (238)
T 1spj_A          217 PSVAVRVLSYVKWIEDTIAEN  237 (238)
T ss_dssp             CEEEEEGGGGHHHHHHHHHHT
T ss_pred             CeEEEEHHHhHHHHHHHhhcC
Confidence            999999999999999999864


No 32 
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=100.00  E-value=7.8e-47  Score=343.17  Aligned_cols=229  Identities=30%  Similarity=0.572  Sum_probs=190.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+....  ....++|+||||+++||||||||+..       ...+.|++|..++.......+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~--~~~~~~CgGsLI~~~~VLTAAHC~~~-------~~~~~v~~G~~~~~~~~~~~~~   71 (240)
T 1gvk_B            1 VVGGTEAQRNSWPSQISLQYRSG--SSWAHTCGGTLIRQNWVMTAAHCVDR-------ELTFRVVVGEHNLNQNNGTEQY   71 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEET--TEEEEEEEEEEEETTEEEECGGGGCS-------CCCEEEEESCSBTTSCCSCCEE
T ss_pred             CCCCeECCCCCcCEEEEEEecCC--CccCceEEEEEeeCCEEEECHHHCCC-------CcceEEEECCeecccCCCcceE
Confidence            78999999999999999986431  11148899999999999999999865       2567899999887766556688


Q ss_pred             EeeeEEEeCCCCCC--C--CCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        107 IPVERIRVHEEFHN--Y--HHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~~--~--~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.|+++++||+|+.  .  .+|||||||++|+. ++.+++|+|||.... .+..+..++++|||.+...+..+..|+++.
T Consensus        72 ~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~-~~~~v~pi~lp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~  149 (240)
T 1gvk_B           72 VGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVT-LNSYVQLGVLPRAGT-ILANNSPCYITGWGLTRTNGQLAQTLQQAY  149 (240)
T ss_dssp             EEEEEEEECTTCCTTCGGGCCCCEEEEESSCCC-CBTTBCCCCCCCTTC-CCCTTCCEEEEESCBSSTTCCBCSBCEEEE
T ss_pred             EEEEEEEECCCCCCCCCCCCCcEEEEEECCccc-cCCCccceecCCCCC-CCCCCCEEEEEecCcCCCCCCcchhccEEE
Confidence            89999999999973  3  78999999999999 778899999998633 345788999999999887777778899999


Q ss_pred             eeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC-CCC---CCccccccc
Q psy16044        183 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-YCG---VGIRYSHRQ  258 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~-~C~---~~~~y~~v~  258 (436)
                      +++++.+.|+..+.......+.||||+. .+..+.|.|||||||++.. +++|+|+||+|||.. .|+   .+.+|++|.
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~  227 (240)
T 1gvk_B          150 LPTVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFTRVS  227 (240)
T ss_dssp             CCEECHHHHTSTTTTGGGCCTTEEEECC-SSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECBTTBSSCTTCCEEEEEGG
T ss_pred             EEEEcHHHhccccccCccCCcceEeecC-CCCCcccCCCCcCceEEEE-CCcEEEEEEEEEeCCCCCCCCCCCcEEEeHH
Confidence            9999999998763222235679999984 4457899999999999974 789999999999963 465   467999999


Q ss_pred             ceecCCcccc
Q psy16044        259 PRLINGKESI  268 (436)
Q Consensus       259 ~~~~~~~~~~  268 (436)
                      .|..||.+.+
T Consensus       228 ~~~~WI~~~i  237 (240)
T 1gvk_B          228 AYISWINNVI  237 (240)
T ss_dssp             GSHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998764


No 33 
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=100.00  E-value=1.1e-46  Score=341.55  Aligned_cols=221  Identities=32%  Similarity=0.639  Sum_probs=172.2

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+.         ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLI~~~~VLTAAHC~~---------~~~~v~~G~~~~~~~~~~~~~   65 (237)
T 1ao5_A            1 VVGGFNCEKNSQPWQVAVYYQK------EHICGGVLLDRNWVLTAAHCYV---------DQYEVWLGKNKLFQEEPSAQH   65 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEETT------EEEEEEEEEETTEEEECTTCCC---------SSCEEEESCCBSSSCCSSCEE
T ss_pred             CCCCeECCCCCcCCEEEEeeCC------CeEEEEEEeeCCEEEECHHHCC---------CCCEEEecccccccCCCCcEE
Confidence            6899999999999999998642      6899999999999999999984         246899999887655555688


Q ss_pred             EeeeEEEeCCCCCC--C-----------CCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC
Q psy16044        107 IPVERIRVHEEFHN--Y-----------HHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD  173 (436)
Q Consensus       107 ~~v~~i~~hp~y~~--~-----------~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~  173 (436)
                      +.|++++.||+|+.  .           .||||||||++|+. ++..++|||||..                        
T Consensus        66 ~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~-~~~~v~picL~~~------------------------  120 (237)
T 1ao5_A           66 RLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPAD-ITDVVKPIALPTK------------------------  120 (237)
T ss_dssp             CCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCC-CCSSSCCCCCCCS------------------------
T ss_pred             EEEEEEEcCCCcCcccccccccccccCCCCCEEEEEeCCccc-cCCceeCCCcCCC------------------------
Confidence            89999999999962  2           45666666666665 4455555555542                        


Q ss_pred             ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcc
Q psy16044        174 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIR  253 (436)
Q Consensus       174 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~  253 (436)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (237)
T 1ao5_A          121 --------------------------------------------------------------------------------  120 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCC-CC
Q psy16044        254 YSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK-GD  332 (436)
Q Consensus       254 y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~-~~  332 (436)
                                                                             ..   ..++.|.++|||.+... ..
T Consensus       121 -------------------------------------------------------~~---~~~~~~~v~GwG~~~~~~~~  142 (237)
T 1ao5_A          121 -------------------------------------------------------EP---KPGSKCLASGWGSITPTRWQ  142 (237)
T ss_dssp             -------------------------------------------------------CC---CTTCEEEEEESCCSSCC-CC
T ss_pred             -------------------------------------------------------CC---CCCCEEEEEECCccCCCCCC
Confidence                                                                   21   23444555555544332 22


Q ss_pred             ccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCC
Q psy16044        333 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGY  411 (436)
Q Consensus       333 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~  411 (436)
                      .+..|+++.+++++.++|++.+..  .+++.|||++...+..+.|.|||||||+++   +  +|+||+||| .+|+..+.
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~  215 (237)
T 1ao5_A          143 KPDDLQCVFITLLPNENCAKVYLQ--KVTDVMLCAGEMGGGKDTCRDDSGGPLICD---G--ILQGTTSYGPVPCGKPGV  215 (237)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSS--CCCTTEEEEECTTCSCBCCTTCTTCEEEET---T--EEEEEEEECCSSTTCTTC
T ss_pred             CCCcccEEEEEecChhHhhhhhcc--cCCCCEEEEccCCCCCCCCCCCCcceEEEC---C--EEeEEEeEcCCCCCCCCC
Confidence            356799999999999999988754  478999999844455689999999999993   2  699999999 78988788


Q ss_pred             CeEEEeCcccHHHHHHHHhhh
Q psy16044        412 PDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       412 p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      |++||||+.|++||+++|+++
T Consensus       216 p~vyt~V~~~~~WI~~~~~~n  236 (237)
T 1ao5_A          216 PAIYTNLIKFNSWIKDTMMKN  236 (237)
T ss_dssp             CEEEECGGGGHHHHHHHHHHC
T ss_pred             CcEEEEHHHHHHHHHHHHhhc
Confidence            999999999999999999764


No 34 
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=100.00  E-value=2.4e-46  Score=338.56  Aligned_cols=229  Identities=29%  Similarity=0.560  Sum_probs=179.8

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCcc--CCce
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEE--EKSE  104 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~--~~~~  104 (436)
                      |+||+   +++|||+|+|+...     ..++|+||||+++||||||||+....   .....+.|++|..+....  ....
T Consensus         1 IvgG~---~~~~Pw~v~l~~~~-----~~~~CgGtLI~~~~VLTAAHC~~~~~---~~~~~~~v~~G~~~~~~~~~~~~~   69 (234)
T 2asu_B            1 VVGGH---PGNSPWTVSLRNRQ-----GQHFCGGSLVKEQWILTARQCFSSCH---MPLTGYEVWLGTLFQNPQHGEPSL   69 (234)
T ss_dssp             CBSCE---ECCCTTEEEEECTT-----SCEEEEEEEEETTEEEEEGGGSSCTT---CCCTTCEEEESCSBSSCCTTCTTC
T ss_pred             CCCcc---cCCCcceEEeeccC-----CCEEEEEEEEeCCEEEECHHHcCCCC---CCcccEEEEEeeeeccCCCCCCce
Confidence            67888   57899999998642     16899999999999999999996531   124668999998876554  4456


Q ss_pred             EEEeeeEEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        105 VRIPVERIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       105 ~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.+.|.+++.||.    .+|||||||++|+. ++.+++|||||... .....+..++++|||.                 
T Consensus        70 ~~~~v~~i~~hp~----~~DiALl~L~~~v~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~-----------------  126 (234)
T 2asu_B           70 QRVPVAKMVCGPS----GSQLVLLKLERSVT-LNQRVALICLPPEW-YVVPPGTKCEIAGWGE-----------------  126 (234)
T ss_dssp             EEEEEEEEEECST----TCCEEEEEESSCCC-CSSSSCCCBCCCTT-CCCCTTCEEEEEESSC-----------------
T ss_pred             EEEEEEEEecCCC----CCCeEEEEeCCcCc-CCCcEeccCCCCcc-ccCCCCCEEEEEeCCc-----------------
Confidence            8889999999997    58999999999999 67789999998742 2233445555555553                 


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                                                                                                      
T Consensus       127 --------------------------------------------------------------------------------  126 (234)
T 2asu_B          127 --------------------------------------------------------------------------------  126 (234)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEe
Q psy16044        265 KESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPL  344 (436)
Q Consensus       265 ~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~  344 (436)
                                                                                    +.... .+..|+++.+++
T Consensus       127 --------------------------------------------------------------~~~~~-~~~~L~~~~~~~  143 (234)
T 2asu_B          127 --------------------------------------------------------------TKGTG-NDTVLNVALLNV  143 (234)
T ss_dssp             --------------------------------------------------------------CTTSS-CTTBCEEEEEEE
T ss_pred             --------------------------------------------------------------cCCCC-CCccceEEEeeE
Confidence                                                                          32211 245688889999


Q ss_pred             eCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHH
Q psy16044        345 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPW  424 (436)
Q Consensus       345 ~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~W  424 (436)
                      ++.++|+..+..  .+.+.|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++|
T Consensus       144 ~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~W  220 (234)
T 2asu_B          144 ISNQECNIKHRG--RVRESEMCTEGLLAPVGACEGDYGGPLACFT-HNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDW  220 (234)
T ss_dssp             ECHHHHHHHTTT--CCCTTEEEECCCSSCCBCCTTCTTCEEEEEE-TTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHH
T ss_pred             EcHHHcccccCC--ccCcceEeecCCCCCCeeccCCCCCceEEEE-CCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHH
Confidence            999999887744  4688999998766567899999999999985 7899999999999999887889999999999999


Q ss_pred             HHHHHhhhhhc
Q psy16044        425 IRKQINIAVDE  435 (436)
Q Consensus       425 I~~~i~~~~~~  435 (436)
                      |+++++...++
T Consensus       221 I~~~~~~~~~~  231 (234)
T 2asu_B          221 IHKVMRLGHHH  231 (234)
T ss_dssp             HHHHC------
T ss_pred             HHHHhhccccc
Confidence            99999876654


No 35 
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=100.00  E-value=1.4e-46  Score=344.23  Aligned_cols=233  Identities=27%  Similarity=0.554  Sum_probs=195.6

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCC---------CCCCCcceEEEeccccC
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIF---------SLPIPELWTAVLGDWDR   97 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~---------~~~~~~~~~v~~g~~~~   97 (436)
                      |+||++|.+++|||+|+|.....     .++|+||||+++||||||||+.....         ....+..+.|++|....
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~-----~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~   75 (251)
T 3gov_B            1 IFNGRPAQKGTTPWIAMLSHLNG-----QPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWR   75 (251)
T ss_dssp             CBTCEECCTTSCTTEEEEEETTC-----CEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBS
T ss_pred             CCCCEECCCCCcCeEEEEeccCC-----CeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceec
Confidence            78999999999999999976421     68899999999999999999965311         11235678999999887


Q ss_pred             CccCCceEEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCcc
Q psy16044         98 TEEEKSEVRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLV  175 (436)
Q Consensus        98 ~~~~~~~~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~  175 (436)
                      .......+.+.|+++++||+|+  ...||||||+|++|+. ++..++|||||....   ..+..++++|||.+... ..+
T Consensus        76 ~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~-~~~~v~picLp~~~~---~~~~~~~v~GwG~~~~~-~~~  150 (251)
T 3gov_B           76 LRSDENEQHLGVKHTTLHPQYDPNTFENDVALVELLESPV-LNAFVMPICLPEGPQ---QEGAMVIVSGWGKQFLQ-RFP  150 (251)
T ss_dssp             SSCCSSCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCC-CSSSCCCCBCCSSCC---CTTCEEEEEECSCCTTS-CCC
T ss_pred             cCCCCcceEeeeEEEEECCCCCCCCCCCCEEEEEeCCccc-CCCceEEeECCCCCC---CCCCEEEEEcCCCCCCC-CCC
Confidence            6666667889999999999997  4679999999999999 788899999998532   46889999999987653 467


Q ss_pred             ccceeeeeeccchhhhhhhcCC-CcCCcCCeEEeccCCCCCCCccCCCCCeeeeEe-cCCcEEEEEEEeEcCCCCC--CC
Q psy16044        176 SKLRQIRVPLHNISVCRDKYGD-SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGYCG--VG  251 (436)
Q Consensus       176 ~~l~~~~~~~~~~~~C~~~~~~-~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~-~~~~~~l~GI~S~g~~~C~--~~  251 (436)
                      ..|+++.+++++.+.|+..+.. ....++.|||++...+..++|.|||||||++.. .+++|+|+||+|||.+|+.  .+
T Consensus       151 ~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p  230 (251)
T 3gov_B          151 ETLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRY  230 (251)
T ss_dssp             SBCEEEEEEEECHHHHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCC
T ss_pred             ccceEEeeEEECHHHhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCC
Confidence            7899999999999999998864 234567999999877778999999999999975 5789999999999987443  35


Q ss_pred             cccccccceecCCccccC
Q psy16044        252 IRYSHRQPRLINGKESIR  269 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~~  269 (436)
                      .+|++|.+|..||.+.+.
T Consensus       231 ~vyt~V~~~~~WI~~~~~  248 (251)
T 3gov_B          231 GVYSYIHHNKDWIQRVTG  248 (251)
T ss_dssp             EEEEETTTTHHHHHHHHC
T ss_pred             EEEEEHHHhHHHHHHHhc
Confidence            799999999999987764


No 36 
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=100.00  E-value=1.9e-46  Score=337.52  Aligned_cols=221  Identities=29%  Similarity=0.625  Sum_probs=181.0

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCcc-CCceE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEE-EKSEV  105 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~-~~~~~  105 (436)
                      |+||++|.+++|||+|+|+...   +  .++|+||||+++||||||||+..         .+.|++|.++.... ....+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~---~--~~~CgGtLIs~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   66 (227)
T 2psx_A            1 IINGSDCDMHTQPWQAALLLRP---N--QLYCGAVLVHPQWLLTAAHCRKK---------VFRVRLGHYSLSPVYESGQQ   66 (227)
T ss_dssp             CBTCEECCTTSCTTEEEEEETT---T--EEEEEEEEEETTEEEECGGGCCS---------SCEEEESCCBSSCCCCTTCE
T ss_pred             CCCCEECCCCCCCCEEEEEecC---C--CceEEEEEEcCCEEEEhHHcCCC---------CcEEEEeeeecccCCCCCcE
Confidence            7899999999999999998642   1  68999999999999999999853         35899998876543 33457


Q ss_pred             EEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        106 RIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       106 ~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      .+.+.++++||+|+  ...||||||||++|+. ++..++|||||..   ....+..++++|||.+.              
T Consensus        67 ~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~-~~~~v~pi~l~~~---~~~~~~~~~v~GwG~~~--------------  128 (227)
T 2psx_A           67 MFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIR-PTKDVRPINVSSH---CPSAGTKCLVSGWGTTK--------------  128 (227)
T ss_dssp             EEEEEEEEECTTCCSSSCTTCCEEEEESSCCC-CCSSSCCCCBCSS---CCCTTCEEEEEESSCSS--------------
T ss_pred             EEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCC-CCCceeeeECCCC---CCCCCCEEEEEeCcccC--------------
Confidence            78999999999997  4689999999999999 6778999999853   23355667777776432              


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecC
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLIN  263 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~  263 (436)
                                                                                                      
T Consensus       129 --------------------------------------------------------------------------------  128 (227)
T 2psx_A          129 --------------------------------------------------------------------------------  128 (227)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC-CccccceEEEE
Q psy16044        264 GKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRV  342 (436)
Q Consensus       264 ~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~-~~~~~l~~~~~  342 (436)
                                                                                       ... ..+..|+++.+
T Consensus       129 -----------------------------------------------------------------~~~~~~~~~L~~~~~  143 (227)
T 2psx_A          129 -----------------------------------------------------------------SPQVHFPKVLQCLNI  143 (227)
T ss_dssp             -----------------------------------------------------------------SSSCCCCSBCEEEEE
T ss_pred             -----------------------------------------------------------------CCCCCCCchheEEEE
Confidence                                                                             111 12456899999


Q ss_pred             EeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCCCeEEEeCccc
Q psy16044        343 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFY  421 (436)
Q Consensus       343 ~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~  421 (436)
                      ++++.++|+..+..  .+.+.|||++. ..+.+.|.|||||||++.+     +|+||+||| .+|+..+.|++||||++|
T Consensus       144 ~i~~~~~C~~~~~~--~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~  215 (227)
T 2psx_A          144 SVLSQKRCEDAYPR--QIDDTMFCAGD-KAGRDSCQGDSGGPVVCNG-----SLQGLVSWGDYPCARPNRPGVYTNLCKF  215 (227)
T ss_dssp             EBCCHHHHHHHSTT--TCCTTEEEECC-STTCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEEGGGC
T ss_pred             EecCHhHhhhhcCC--CCCCCEEcccC-CCCCccCCCCCCcceeeCC-----EEEEEEeecCCCCCCCCCCcEEEEHHHh
Confidence            99999999988765  46899999986 3446899999999999842     699999999 689877789999999999


Q ss_pred             HHHHHHHHhhh
Q psy16044        422 LPWIRKQINIA  432 (436)
Q Consensus       422 ~~WI~~~i~~~  432 (436)
                      ++||+++|+.+
T Consensus       216 ~~WI~~~~~~~  226 (227)
T 2psx_A          216 TKWIQETIQAN  226 (227)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHhcC
Confidence            99999999864


No 37 
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=100.00  E-value=3.4e-47  Score=345.85  Aligned_cols=228  Identities=27%  Similarity=0.504  Sum_probs=192.2

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...     ..++|+||||+++||||||||+...       ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~-----~~~~CgGtLIs~~~VLTAAhC~~~~-------~~~~V~~G~~~~~~~~~~~~~   68 (241)
T 2jkh_A            1 IVGGQECKDGECPWQALLINEE-----NEGFCGGTILSEFYILTAAHCLYQA-------KRFKVRVGDRNTEQEEGGEAV   68 (241)
T ss_dssp             CBSSEECCTTSSTTEEEEECTT-----SCEEEEEEECSSSEEEECGGGGGSC-------SSCEEEESCSBTTCCCSCCEE
T ss_pred             CCCCEECCCCCcCcEEEEEcCC-----CCcEEEEEEeeCCEEEEcHHHcCCC-------CcEEEEECCccCCCCCCCcEE
Confidence            6899999999999999997532     1689999999999999999999652       357899999877665556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCC--CCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKR--PVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~--~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.|+++++||+|+  ...||||||+|++|+. ++.+++|||||..+..  ....+..++++|||.+...+..+..|++..
T Consensus        69 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~  147 (241)
T 2jkh_A           69 HEVEVVIKHNRFTKETYDFDIAVLRLKTPIT-FRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLE  147 (241)
T ss_dssp             ECEEEEEECTTCBTTTTBTCCEEEEESSCCC-CBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEE
T ss_pred             EEeEEEEeCCCCCCCCCCCcEEEEEECCccc-CCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEee
Confidence            8999999999997  4689999999999999 7788999999974211  134578999999999887666778899999


Q ss_pred             eeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccce
Q psy16044        183 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPR  260 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~  260 (436)
                      +++++.+.|+..+..  ...+.||||+...+..++|.|||||||++.. +++|+|+||+|||.+|+.  .+.+|++|..|
T Consensus       148 ~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~  224 (241)
T 2jkh_A          148 VPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF-KDTYFVTGIVSWGEGCARKGKYGIYTKVTAF  224 (241)
T ss_dssp             EEEECHHHHHHHCSS--CCCTTEEEESCSSSSCBCCTTTTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGG
T ss_pred             eccccHHHhcccccC--cCCCCeEEeeCCCCCCccCcCcCCCeeEEEE-CCEEEEEEEEEECCCCCCCCCceEEEEhHHH
Confidence            999999999987753  3567999998766668999999999999974 789999999999988542  46799999999


Q ss_pred             ecCCccccCC
Q psy16044        261 LINGKESIRG  270 (436)
Q Consensus       261 ~~~~~~~~~~  270 (436)
                      ..||.+.+..
T Consensus       225 ~~WI~~~~~~  234 (241)
T 2jkh_A          225 LKWIDRSMKT  234 (241)
T ss_dssp             HHHHHHHTC-
T ss_pred             HHHHHHHhcc
Confidence            9999887764


No 38 
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=100.00  E-value=8.2e-47  Score=343.14  Aligned_cols=227  Identities=28%  Similarity=0.480  Sum_probs=190.7

Q ss_pred             CeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCce
Q psy16044         25 PRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSE  104 (436)
Q Consensus        25 ~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~  104 (436)
                      .||+||++|.+++|||+|+|+...      .++|+||||+++||||||||+...    .....+.|++|..++.......
T Consensus         1 ~rIvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~~----~~~~~~~v~~G~~~~~~~~~~~   70 (240)
T 1mza_A            1 MEIIGGKEVSPHSRPFMASIQYGG------HHVCGGVLIDPQWVLTAAHCQYRF----TKGQSPTVVLGAHSLSKNEASK   70 (240)
T ss_dssp             CCCCCCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECGGGSCTT----CSCSCEEEEESCSBSSSCCTTC
T ss_pred             CceECCEECCCCCCCeEEEEeeCC------ceEEEEEEecCCEEEECHHhCCCC----CCCCCeEEEeCceecCCCCCce
Confidence            389999999999999999998642      689999999999999999998642    1235688999998876655556


Q ss_pred             EEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC-ccccceee
Q psy16044        105 VRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKLRQI  181 (436)
Q Consensus       105 ~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~-~~~~l~~~  181 (436)
                      +.+.|+++++||+|+  ...||||||||++|+. ++..++|||||..  .....+..++++|||.+...+. .+..|+++
T Consensus        71 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~pi~l~~~--~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~  147 (240)
T 1mza_A           71 QTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAK-LNKHVKMLHIRSK--TSLRSGTKCKVTGWGATDPDSLRPSDTLREV  147 (240)
T ss_dssp             EEEEEEEEEECCCSSCSSSSSCCEEEEESSCCC-CBTTBCCCCBCSS--CCCCTTCEEEEEECCCSSTTCSSCCSBCEEE
T ss_pred             EEEEEEEEEeCCCccCCCCCceEEEEEeCCCcc-cCCceeeeecCCc--ccCCCCCEEEEEeCCcCCCCCCCccccceEe
Confidence            889999999999997  4689999999999999 7788999999974  2345788999999999886654 57789999


Q ss_pred             eeeccchhhhh--hhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC---CCccccc
Q psy16044        182 RVPLHNISVCR--DKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG---VGIRYSH  256 (436)
Q Consensus       182 ~~~~~~~~~C~--~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~---~~~~y~~  256 (436)
                      .+++++.+.|+  ..+.......+.||||+...+..++|.|||||||+++   +  +|+||+|||.+ |+   .+.+|++
T Consensus       148 ~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~~---~--~l~Gi~S~g~~-C~~~~~p~vyt~  221 (240)
T 1mza_A          148 TVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICK---G--VFHAIVSGGHE-CGVATKPGIYTL  221 (240)
T ss_dssp             EEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEET---T--EEEEEECSSCC-SSCTTCCEEEEE
T ss_pred             EEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEEC---C--EEEEEEEECCC-CCCCCCCcEEEe
Confidence            99999999998  4454322456799999976666899999999999984   2  69999999987 64   3679999


Q ss_pred             ccc-eecCCccccCC
Q psy16044        257 RQP-RLINGKESIRG  270 (436)
Q Consensus       257 v~~-~~~~~~~~~~~  270 (436)
                      |.. |..||.+.+..
T Consensus       222 v~~~y~~WI~~~~~~  236 (240)
T 1mza_A          222 LTKKYQTWIKSNLVP  236 (240)
T ss_dssp             CCHHHHHHHHHHTCC
T ss_pred             ChHHHHHHHHHhccC
Confidence            998 99999987764


No 39 
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=100.00  E-value=1.7e-46  Score=342.87  Aligned_cols=230  Identities=28%  Similarity=0.519  Sum_probs=192.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.+|..++|||+|+|+..       .++|+||||+++||||||||+....    ....+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-------~~~CgGsLIs~~~VLTAAHC~~~~~----~~~~~~V~~G~~~~~~~~~~~~~   69 (248)
T 2r0l_A            1 IIGGSSSLPGSHPWLAAIYIG-------DSFCAGSLVHTCWVVSAAHCFSHSP----PRDSVSVVLGQHFFNRTTDVTQT   69 (248)
T ss_dssp             CBSCEECCTTSSTTEEEEEET-------TEEEEEEEEETTEEEECGGGGTTCC----CGGGEEEEESCCBTTCCCSSCEE
T ss_pred             CCCCccCCCCCCCeEEEEEcC-------CceEEEEEEcCCEEEECHHHcCCCC----CcCcEEEEEEeEEcCCCCCccEE
Confidence            689999999999999999753       5889999999999999999996531    23678999999887766666788


Q ss_pred             EeeeEEEeCCCCCC---CCCceeEEEeCCC----CCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC-ccccc
Q psy16044        107 IPVERIRVHEEFHN---YHHDIALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKL  178 (436)
Q Consensus       107 ~~v~~i~~hp~y~~---~~~DiAll~L~~~----~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~-~~~~l  178 (436)
                      +.|+++++||.|+.   ..+|||||||++|    +. ++.+++|||||... .....+..++++|||.+..... .+..|
T Consensus        70 ~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~~~~~~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L  147 (248)
T 2r0l_A           70 FGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCAT-RSQFVQPICLPEPG-STFPAGHKCQIAGWGHLDENVSGYSSSL  147 (248)
T ss_dssp             ECEEEEEECTTCCTTSTTTTCCEEEEECCSSSCSSC-CBTTBCCCBCCCTT-CCCCTTCEEEEEESCCSSSSCCSCCSBC
T ss_pred             EeeeEEEeCCccCcCCCCCCCEEEEEeCCccccccc-CCCcEEEEECCCCC-CCCCCCCEEEEEEccccCCCCCCCCchh
Confidence            99999999999963   6799999999999    66 67889999999853 3345789999999998875543 46789


Q ss_pred             eeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCccccc
Q psy16044        179 RQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIRYSH  256 (436)
Q Consensus       179 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~y~~  256 (436)
                      +++.+++++.+.|+..........+.|||++...+..++|.|||||||++.. +++|+|+||+|||.+|+  +.+.+|++
T Consensus       148 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~  226 (248)
T 2r0l_A          148 REALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRLHKPGVYTR  226 (248)
T ss_dssp             EEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCTTCCEEEEE
T ss_pred             eEEEEeeeCHHHhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEE-CCcEEEEEEEEeCCCCCCCCCCcEEEE
Confidence            9999999999999875332234567999999876668999999999999984 78999999999998743  34689999


Q ss_pred             ccceecCCccccCC
Q psy16044        257 RQPRLINGKESIRG  270 (436)
Q Consensus       257 v~~~~~~~~~~~~~  270 (436)
                      |.+|..||.+.+..
T Consensus       227 V~~~~~WI~~~~~~  240 (248)
T 2r0l_A          227 VANYVDWINDRIRP  240 (248)
T ss_dssp             GGGGHHHHHHHHC-
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999887753


No 40 
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=100.00  E-value=3.4e-46  Score=335.33  Aligned_cols=219  Identities=34%  Similarity=0.653  Sum_probs=184.0

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|...       .++|+||||+++||||||||+..         .+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-------~~~C~GtLI~~~~VLTAAhC~~~---------~~~v~~g~~~~~~~~~~~~~   64 (223)
T 4i8h_A            1 IVGGYTCGANTVPYQVSLNSG-------YHFCGGSLINSQWVVSAAHCYKS---------GIQVRLGEDNINVVEGNEQF   64 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEESS-------SEEEEEEECSSSEEEECGGGCCS---------SCEEEESCSSTTSCCSCCEE
T ss_pred             CCCCEECCCCCCCeEEEecCC-------CcEEEEEEEcCCEEEecHHhCCC---------CcEEEEccccccccCCCcEE
Confidence            689999999999999999721       68899999999999999999853         46899999887766666788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|.++++||+|+  ...||||||||++|+. ++..++|||||...   ...+..++++|||.+.               
T Consensus        65 ~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~-~~~~v~pi~l~~~~---~~~~~~~~v~GwG~~~---------------  125 (223)
T 4i8h_A           65 ISASKSIVHPSYNSNTLNNDIMLIKLKSAAS-LNSRVASISLPTSC---ASAGTQCLISGWGNTK---------------  125 (223)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CBTTBCCCBCCSSC---CCTTCEEEEEESSCCC---------------
T ss_pred             EEEeEEEECcCCCCCCCcCCEEEEEECCcCc-CCCceeceECCCCC---CCCCCEEEEEeccccc---------------
Confidence            8999999999997  4679999999999999 67789999998742   3456667777776432               


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (223)
T 4i8h_A          126 --------------------------------------------------------------------------------  125 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCC-CCccccceEEEEE
Q psy16044        265 KESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK-GDLVSKLRQIRVP  343 (436)
Q Consensus       265 ~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~-~~~~~~l~~~~~~  343 (436)
                                                                                      .. ...+..|+++.++
T Consensus       126 ----------------------------------------------------------------~~~~~~~~~l~~~~~~  141 (223)
T 4i8h_A          126 ----------------------------------------------------------------SSGTSYPDVLKCLKAP  141 (223)
T ss_dssp             ----------------------------------------------------------------SSSCCCCSSCEEEEEE
T ss_pred             ----------------------------------------------------------------CCCCCccccceEEEee
Confidence                                                                            11 1124568899999


Q ss_pred             eeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHH
Q psy16044        344 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       344 ~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~  423 (436)
                      +++.++|+..+..  .++++|||++...+..+.|.|||||||++..     +|+||+|||.+|+..+.|++||||+.|++
T Consensus       142 ~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~  214 (223)
T 4i8h_A          142 ILSDSSCKSAYPG--QITSNMFCAGYLEGGKDSCQGDSGGPVVCSG-----KLQGIVSWGSGCAQKNKPGVYTKVCNYVS  214 (223)
T ss_dssp             BCCHHHHHHHSTT--TCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred             ecCHHHHHHhhCC--CCCCCeEeccCCCCCCccCCCCCCCcEEECC-----EEEEEEEcCCCCCCCCCCeEEEEHHHHHH
Confidence            9999999998865  5789999998766667999999999999953     59999999999988788999999999999


Q ss_pred             HHHHHHhh
Q psy16044        424 WIRKQINI  431 (436)
Q Consensus       424 WI~~~i~~  431 (436)
                      ||+++|+.
T Consensus       215 WI~~~i~~  222 (223)
T 4i8h_A          215 WIKQTIAS  222 (223)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhc
Confidence            99999975


No 41 
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=100.00  E-value=1.2e-46  Score=343.93  Aligned_cols=235  Identities=27%  Similarity=0.466  Sum_probs=196.0

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+..... +...++|+||||+++||||||||+.+.    .....+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~-~~~~~~CgGtLI~~~~VLTAAHC~~~~----~~~~~~~v~~g~~~~~~~~~~~~~   75 (247)
T 3mhw_U            1 IIGGEFTTIENQPWFAAIYRRHRG-GSVTYVCGGSLISPCWVISATHCFIDY----PKKEDYIVYLGRSRLNSNTQGEMK   75 (247)
T ss_dssp             CBSSEECCGGGSTTEEEEEEECTT-SCEEEEEEEEEEETTEEEECGGGTTTS----CCGGGEEEEESCCBSSSCCTTCEE
T ss_pred             CCCCEECCCCCCCCEEEEEEecCC-CccceEEEEEEEeCCEEEEcHHhCcCC----CCCccEEEEeccccccCCCCCCEE
Confidence            789999999999999999876432 222578999999999999999999753    134568999999888776667788


Q ss_pred             EeeeEEEeCCCCCC----CCCceeEEEeCCC----CCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC-cccc
Q psy16044        107 IPVERIRVHEEFHN----YHHDIALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSK  177 (436)
Q Consensus       107 ~~v~~i~~hp~y~~----~~~DiAll~L~~~----~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~-~~~~  177 (436)
                      +.|+++++||+|+.    ..||||||||++|    +. ++..++|+|||... .....+..|+++|||.+..... .+..
T Consensus        76 ~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~-~~~~v~pi~lp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~  153 (247)
T 3mhw_U           76 FEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQ-PSRTIQTISLPSMY-NDPQFGTSCEITGFGKENSTDYLYPEQ  153 (247)
T ss_dssp             EEEEEEEECTTCEEC-CCEESCCEEEEEECTTSCCCC-CBTTBCCCBCCCTT-CCCCTTCEEEEEESCCSSTTCSSCCSB
T ss_pred             EEEEEEEECCCCCCCcCCCCCcEEEEEeCCccccccc-cCCcccccccCCCc-CCCCCCCEEEEEecCCcCCCCcccchh
Confidence            99999999999973    4589999999999    56 67789999999853 3345688999999998875543 5678


Q ss_pred             ceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccc
Q psy16044        178 LRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYS  255 (436)
Q Consensus       178 l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~  255 (436)
                      |+...+++++.+.|+..+.......+.|||++...+..++|.|||||||++.. +++|+|+||+|||.+|+.  .+.+|+
T Consensus       154 l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-~~~~~l~Gi~S~g~~c~~~~~p~vyt  232 (247)
T 3mhw_U          154 LKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALKDKPGVYT  232 (247)
T ss_dssp             CEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEE
T ss_pred             heeeEEEEEChHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEE-CCCEEEEEEEEECCCCCCCCCCeEEE
Confidence            99999999999999886543345667999999887778999999999999974 789999999999988542  467999


Q ss_pred             cccceecCCccccC
Q psy16044        256 HRQPRLINGKESIR  269 (436)
Q Consensus       256 ~v~~~~~~~~~~~~  269 (436)
                      +|..|..||++.+.
T Consensus       233 ~V~~~~~WI~~~~~  246 (247)
T 3mhw_U          233 RVSHFLPWIRSHTK  246 (247)
T ss_dssp             EGGGCHHHHHHHTT
T ss_pred             EHHHHHHHHHHHhc
Confidence            99999999987654


No 42 
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=100.00  E-value=3.2e-47  Score=344.83  Aligned_cols=226  Identities=32%  Similarity=0.559  Sum_probs=190.9

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|....      .++|+||||+++||||||||+...       ..+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAhC~~~~-------~~~~v~~G~~~~~~~~~~~~~   67 (235)
T 2wph_S            1 VVGGEDAKPGQFPWQVVLNGKV------DAFCGGSIVNEKWIVTAAHCVETG-------VKITVVAGEHNIEETEHTEQK   67 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEESSS------TTCEEEEEEETTEEEECGGGCCTT-------SCCEEEESCCBTTSCCSCCEE
T ss_pred             CCCCEECCCCCCCeEEEEccCC------CeeEEEEEEeCCEEEECHHHCcCC-------CCEEEEEcccccCCCCCCcEE
Confidence            6899999999999999997542      578999999999999999999652       357899999887766556688


Q ss_pred             EeeeEEEeCCCCCC----CCCceeEEEeCCCCCCCCCceeeeeecCCCCC-CCCCCCcEEEEecCccCCCCCccccceee
Q psy16044        107 IPVERIRVHEEFHN----YHHDIALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGRVKPKGDLVSKLRQI  181 (436)
Q Consensus       107 ~~v~~i~~hp~y~~----~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~-~~~~~~~~~~~GwG~~~~~~~~~~~l~~~  181 (436)
                      +.|.++++||+|+.    ..||||||||++|+. ++.+++|||||..... ....+..++++|||.+...+..+..|++.
T Consensus        68 ~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~-~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~  146 (235)
T 2wph_S           68 RNVIRIIPHHNFNAAINTYNHDIALLELDEPLV-LNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYL  146 (235)
T ss_dssp             EEEEEEEECTTTTSSSSCCTTCCEEEEESSCCC-CBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEE
T ss_pred             eeeEEEEeCCCCcccCCcCCCCEEEEEECCcCc-CCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEe
Confidence            89999999999973    578999999999999 7788999999974211 12246789999999988766777889999


Q ss_pred             eeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCcccccccc
Q psy16044        182 RVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIRYSHRQP  259 (436)
Q Consensus       182 ~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~y~~v~~  259 (436)
                      .+++++.+.|...+..  ...+.||||+...+..+.|.|||||||++. .+++|+|+||+|||.+|+  +.+.+|++|..
T Consensus       147 ~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~-~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~  223 (235)
T 2wph_S          147 RVPLVDRATCLRSTKF--TITNNMFCAGFHEGGRDSCQGDSGGPHVTE-VEGTSFLTGIISWGEECAMKGKYGIYTKVSR  223 (235)
T ss_dssp             EEEEECHHHHHHTCSS--CCCTTEEEESCTTCSCBCCTTCTTCEEEEE-ETTEEEEEEEEEECSSSSCTTCCEEEEEGGG
T ss_pred             eeeeeCHHHhcCcccC--CCCCCEEEeCCCCCCCccCCCCCCCceEEe-ECCeEEEEEEEEECCCCCCCCCCeEEEEHHH
Confidence            9999999999987753  346799999876666899999999999997 478999999999998844  24679999999


Q ss_pred             eecCCccccC
Q psy16044        260 RLINGKESIR  269 (436)
Q Consensus       260 ~~~~~~~~~~  269 (436)
                      |..||.+.+.
T Consensus       224 ~~~WI~~~~~  233 (235)
T 2wph_S          224 YVNWIKEKTK  233 (235)
T ss_dssp             GHHHHHHHCC
T ss_pred             hHHHHHHHHh
Confidence            9999988765


No 43 
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=100.00  E-value=1.3e-46  Score=342.98  Aligned_cols=229  Identities=35%  Similarity=0.641  Sum_probs=187.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+....   ...++|+||||+++||||||||+....   .....+.|++|..+...   ..+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~---~~~~~CgGtLIs~~~VLTAAHC~~~~~---~~~~~~~v~~g~~~~~~---~~~~   71 (245)
T 2f9n_A            1 IVGGQEAPRSKWPWQVSLRVRDR---YWMHFCGGSLIHPQWVLTAAHCVGPDV---KDLATLRVQLREQHLYY---QDQL   71 (245)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESS---SEEEEEEEEEEETTEEEECGGGGCSSC---CCGGGEEEECSCSBTTT---TCCC
T ss_pred             CCCCeECCCCCCCcEEEEEEcCC---CcceEEEEEEeeCCEEEECHHhCCCCC---CCcceEEEEeCCccccc---CceE
Confidence            78999999999999999987532   125899999999999999999996431   13456889999876643   2356


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCc--cccceeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDL--VSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~--~~~l~~~~  182 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||... .....+..|+++|||.+...+..  +..|+++.
T Consensus        72 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~  149 (245)
T 2f9n_A           72 LPVSRIIVHPQFYIIQTGADIALLELEEPVN-ISSRVHTVMLPPAS-ETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVK  149 (245)
T ss_dssp             BCEEEEEECTTCCSSCCTTCCEEEEESSCCC-CCSSSCCCBCCCTT-CCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEE
T ss_pred             EEEEEEEECCCccCCCCCCcEEEEEeCCCCc-CCCCccccCCCCcc-cCCCCCCEEEEEEeCCCCCCCCCCccccceEEE
Confidence            7899999999997  4689999999999999 77889999999753 33457889999999988755433  34799999


Q ss_pred             eeccchhhhhhhcCCC-------cCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCcc
Q psy16044        183 VPLHNISVCRDKYGDS-------VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIR  253 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~-------~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~  253 (436)
                      +++++.+.|+..+...       ....+.||||+.  ...+.|.|||||||++.. +++|+|+||+|||.+|+  +.+.+
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~--~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~v  226 (245)
T 2f9n_A          150 VPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSCQGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQPNRPGI  226 (245)
T ss_dssp             CCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECC--SSSBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEE
T ss_pred             EEEcCHHHhhhhhcccccccccccccccccEeecC--CCCCcCCCCCCCceEEEE-CCEEEEEEEEEeCCCCCCCCCCeE
Confidence            9999999999877431       235679999984  347899999999999985 78999999999998854  24689


Q ss_pred             cccccceecCCccccC
Q psy16044        254 YSHRQPRLINGKESIR  269 (436)
Q Consensus       254 y~~v~~~~~~~~~~~~  269 (436)
                      |++|..|..||.+.+.
T Consensus       227 yt~V~~y~~WI~~~~~  242 (245)
T 2f9n_A          227 YTRVTYYLDWIHHYVP  242 (245)
T ss_dssp             EEEGGGGHHHHHHHSC
T ss_pred             EEEHHHHHHHHHHHhh
Confidence            9999999999987765


No 44 
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=100.00  E-value=2e-46  Score=337.84  Aligned_cols=224  Identities=27%  Similarity=0.508  Sum_probs=193.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||+++.+++|||+|+|+......  ..++|+||||+++||||||||+.         ..+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~--~~~~CgGtLI~~~~VLTAAHC~~---------~~~~v~~G~~~~~~~~~~~~~   69 (227)
T 3fzz_A            1 IIGGNEISPHSRPYMAYYEFLKVGG--KKMFCGGFLVRDKFVLTAAHCKG---------RSMTVTLGAHNIKAKEETQQI   69 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECSSS--CEEEEEEEEEETTEEEECTTCCC---------EEEEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCcCCEEEEEEEeCCC--ceeEEEEEEEeCCEEEECcccCC---------CCcEEEEcccccCCCCCCceE
Confidence            7899999999999999998764322  26899999999999999999973         357899999888776667788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||... .....+..++++|||.+...+..+..|+++.++
T Consensus        70 ~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~  147 (227)
T 3fzz_A           70 IPVAKAIPHPDYNPDDRSNDIMLLKLVRNAK-RTRAVRPLNLPRRN-AHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLT  147 (227)
T ss_dssp             EEEEEEEECTTCBTTTTBTCCEEEEESSCCC-CBTTBCCCCCCCTT-CCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEE
T ss_pred             EEEEEEEECcCCCCCCCcCCEEEEEECCcCC-CCCcccccCCCCcc-cCCCCCCEEEEEECCcccCCCCCCCeeeEEEee
Confidence            9999999999997  4679999999999999 78889999999864 334578999999999988777778899999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                      +++.+.|...+.... ..+.++|++...+..+.|.|||||||++..     +|+||+|||.+|+..+.+|++|.+|..||
T Consensus       148 ~~~~~~C~~~~~~~~-~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~-----~l~Gi~S~g~~c~~~p~vyt~V~~~~~WI  221 (227)
T 3fzz_A          148 VQKDQVCESQFQSSY-NRANEICVGDSKIKGASFEEDSGGPLVCKR-----AAAGIVSYGQTDGSAPQVFTRVLSFVSWI  221 (227)
T ss_dssp             BCCHHHHHHHHTTTC-CTTTEEEECCCSSCBCCTTTTTTCEEEETT-----EEEEEEEECCTTCSSSEEEEEGGGTHHHH
T ss_pred             eecHHHhhhhhcccc-CCCceEEEeCCCCCCcccccCCccceEEec-----CCcEEEEECCCCCCCCeEEEEhHHhHHHH
Confidence            999999998775433 356899999877778999999999999853     69999999998777789999999999999


Q ss_pred             ccccC
Q psy16044        265 KESIR  269 (436)
Q Consensus       265 ~~~~~  269 (436)
                      .+.+.
T Consensus       222 ~~~i~  226 (227)
T 3fzz_A          222 KKTMK  226 (227)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            87654


No 45 
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=100.00  E-value=1.7e-46  Score=341.39  Aligned_cols=228  Identities=28%  Similarity=0.544  Sum_probs=189.8

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+....   ...++|+||||+++||||||||+...     .+..+.|++|..+.... ...+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~---~~~~~CgGtLIs~~~VLTAAHC~~~~-----~~~~~~v~~G~~~~~~~-~~~~~   71 (241)
T 1m9u_A            1 VIGGTNASPGEFPWQLSQQRQSG---SWSHSCGASLLSSTSALSASHCVDGV-----LPNNIRVIAGLWQQSDT-SGTQT   71 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEEESS---SEEEEEEEEECSSSEEEECHHHHTTC-----CGGGEEEEESCSBTTCC-TTCEE
T ss_pred             CCCCeECCCCCcCeEEEEEecCC---ceeeeeEEEEEeCCEEEecHHhCCCC-----CcceEEEEEEeecCCCC-CCceE
Confidence            78999999999999999987531   22589999999999999999999653     35678999998876643 34578


Q ss_pred             EeeeEEEeCCCC--C--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        107 IPVERIRVHEEF--H--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y--~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.|+++++||+|  +  ...||||||||++|+. ++..++|+|||....... .+..++++|||.+...+..+..|+++.
T Consensus        72 ~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~~~~-~~~~~~v~GwG~~~~~~~~~~~L~~~~  149 (241)
T 1m9u_A           72 ANVDSYTMHENYGAGTASYSNDIAILHLATSIS-LGGNIQAAVLPANNNNDY-AGTTCVISGWGRTDGTNNLPDILQKSS  149 (241)
T ss_dssp             EEEEEEEECTTTTCSSSTTTTCCEEEEESSCCC-CCSSCCCCCCCSCSSCCC-TTCEEEEEESSCSSSSSCCCSBCEEEE
T ss_pred             EEEEEEEeCCCcCCCCCcccccEEEEEecCccc-cCCCccccCcCCCcCCCC-CCCEEEEEeCcccCCCCCcccceeEee
Confidence            899999999999  4  4689999999999999 788899999998622223 788999999999887666778899999


Q ss_pred             eeccchhhhhhhcCCCcC--CcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeE--c--CCCC--CCCccc
Q psy16044        183 VPLHNISVCRDKYGDSVE--LHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSF--G--SGYC--GVGIRY  254 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~--~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~--g--~~~C--~~~~~y  254 (436)
                      +++++.++|+..+.....  ..+.|||++...+..+.|.|||||||++..  ++|+|+||+||  +  .+||  +.+.+|
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~--~~~~l~Gi~S~~~~~g~~C~~~~~p~vy  227 (241)
T 1m9u_A          150 IPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPD--GGTRVVGVTSWVVSSGLGACLPDYPSVY  227 (241)
T ss_dssp             EEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEES--SSEEEEEEEEECCBCTTSCBCTTSCEEE
T ss_pred             EEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeC--CCEEEEEEEEEeccCCCCccCCCCCEEE
Confidence            999999999987643222  567999999866668999999999999973  88999999999  4  4544  346899


Q ss_pred             ccccceecCCccc
Q psy16044        255 SHRQPRLINGKES  267 (436)
Q Consensus       255 ~~v~~~~~~~~~~  267 (436)
                      ++|..|..||.+.
T Consensus       228 t~V~~~~~WI~~~  240 (241)
T 1m9u_A          228 TRVSAYLGWIGDN  240 (241)
T ss_dssp             EEGGGTHHHHHHH
T ss_pred             EEhHHhHhHHhhh
Confidence            9999999999764


No 46 
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=100.00  E-value=1.6e-46  Score=340.82  Aligned_cols=223  Identities=28%  Similarity=0.503  Sum_probs=187.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+...      ...+.|++|..+....   .+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~~------~~~~~v~~G~~~~~~~---~~~   65 (240)
T 2zgc_A            1 IIGGREVIPHSRPYMASLQRNG------SHLCGGVLVHPKWVLTAAHCLAQR------MAQLRLVLGLHTLDSP---GLT   65 (240)
T ss_dssp             CBTCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECGGGGCSC------GGGEEEEESCSBSSSC---CEE
T ss_pred             CCCCEECCCCCcCcEEEEEeCC------CeEEEEEEEcCCEEEEcHHhcCCC------CCCEEEEecccccCCC---CeE
Confidence            7899999999999999998632      689999999999999999999653      2368899998776543   377


Q ss_pred             EeeeEEEeCCCCCC---CCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        107 IPVERIRVHEEFHN---YHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       107 ~~v~~i~~hp~y~~---~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      +.|+++++||+|+.   ..||||||||++|+. ++.+++|||||.... ....+..++++|||.+...+..+..|+++.+
T Consensus        66 ~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~  143 (240)
T 2zgc_A           66 FHIKAAIQHPRYKPVPALENDLALLQLDGKVK-PSRTIRPLALPSKRQ-VVAAGTRCSMAGWGLTHQGGRLSRVLRELDL  143 (240)
T ss_dssp             EEEEEEEECTTCBCTTSCBSCCEEEEESSCCC-CCSSCCCCCCCCTTC-CCCTTCEEEEEECCBSSTTCCBCSBCEEEEE
T ss_pred             EEEEEEEECCCCCCCCCCcccEEEEEeCCccc-CCCceeeeEcCCCCC-CCCCCCEEEEEECCcccCCCCcCceeeeeee
Confidence            89999999999973   679999999999999 788899999998533 3457899999999998866677788999999


Q ss_pred             eccchhhhhh--hcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC---CCccccccc
Q psy16044        184 PLHNISVCRD--KYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG---VGIRYSHRQ  258 (436)
Q Consensus       184 ~~~~~~~C~~--~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~---~~~~y~~v~  258 (436)
                      ++++.+.|+.  .+..  ...+.|||++...+..++|.|||||||++.   +.|+|+||+|||...|+   .+.+|++|.
T Consensus       144 ~~~~~~~C~~~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~  218 (240)
T 2zgc_A          144 QVLDTRMCNNSRFWNG--SLSPSMVCLAADSKDQAPCKGDSGGPLVCG---KGRVLAGVLSFSSRVCTDIFKPPVATAVA  218 (240)
T ss_dssp             EECCHHHHTSTTTTTT--CCCTTEEEEECSSTTCBCCTTCTTCEEEET---TTTEEEEEECCCCSSTTCTTSCCEEEESG
T ss_pred             eecCHHHhCCccccCC--CCCCceEeeccCCCCCccCCCCccCeeEEC---CCCEEEEEEEECCCCCCCCCCCcEEEEHH
Confidence            9999999987  4433  345689999877666899999999999984   34899999999955565   368999999


Q ss_pred             ceecCCccccCCC
Q psy16044        259 PRLINGKESIRGA  271 (436)
Q Consensus       259 ~~~~~~~~~~~~~  271 (436)
                      .|..||.+.+...
T Consensus       219 ~y~~WI~~~~~~~  231 (240)
T 2zgc_A          219 PYVSWIRKVTGRS  231 (240)
T ss_dssp             GGHHHHHHHHCCC
T ss_pred             HhHHHHHHHHhhc
Confidence            9999998877643


No 47 
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=100.00  E-value=8.6e-47  Score=342.89  Aligned_cols=223  Identities=32%  Similarity=0.613  Sum_probs=152.9

Q ss_pred             CeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCce
Q psy16044         25 PRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSE  104 (436)
Q Consensus        25 ~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~  104 (436)
                      .||+||++|..++|||+|+|+ ..   +  .++|+||||+++||||||||+..         .+.|++|..+........
T Consensus         2 arIvgG~~a~~~~~Pw~v~l~-~~---~--~~~CgGsLIs~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~   66 (240)
T 1sgf_A            2 APPVQSQVDCENSQPWHVAVY-RF---N--KYQCGGVLLDRNWVLTAAHCYND---------KYQVWLGKNNFLEDEPSD   66 (240)
T ss_dssp             -----------CCCTTEEEEE-CT---T--SCCEEEEECSSSEEEECGGGCCS---------CCEEEECC----C-CTTC
T ss_pred             CcccCCeECCCCCcCCEEEEE-eC---C--CeEEEEEEecCCEEEECHHhCCC---------CceEEeCCcccccCCCCc
Confidence            589999999999999999994 21   1  58899999999999999999853         357999988776555556


Q ss_pred             EEEeeeEEEeCCCCC-------------CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCC
Q psy16044        105 VRIPVERIRVHEEFH-------------NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK  171 (436)
Q Consensus       105 ~~~~v~~i~~hp~y~-------------~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~  171 (436)
                      +.+.|+++++||+|+             ...||||||||++|+. ++..++|||||...   ...+..++++|||     
T Consensus        67 ~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~-~~~~v~picL~~~~---~~~~~~~~v~GwG-----  137 (240)
T 1sgf_A           67 QHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPAD-ITDVVKPITLPTEE---PKLGSTCLASGWG-----  137 (240)
T ss_dssp             EEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEEEEESSCCC-CCSSCCCCCCCCSC---CCTTCEEEEC--------
T ss_pred             eEEEEEEEEcCCCCcccccccccccccCCCCCceEEEEeCCcCc-CCCcccccCCCCCC---CCCCCEEEEEecC-----
Confidence            888999999999996             2356777777777666 55566666666532   1234455555555     


Q ss_pred             CCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCC
Q psy16044        172 GDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVG  251 (436)
Q Consensus       172 ~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~  251 (436)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (240)
T 1sgf_A          138 --------------------------------------------------------------------------------  137 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCC-
Q psy16044        252 IRYSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK-  330 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~-  330 (436)
                                                                                                .+... 
T Consensus       138 --------------------------------------------------------------------------~~~~~~  143 (240)
T 1sgf_A          138 --------------------------------------------------------------------------STTPIK  143 (240)
T ss_dssp             ------------------------------------------------------------------------------C-
T ss_pred             --------------------------------------------------------------------------CCCCCC
Confidence                                                                                      33221 


Q ss_pred             CCccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCC
Q psy16044        331 GDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKS  409 (436)
Q Consensus       331 ~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~  409 (436)
                      ...+..|+++.+++++.++|+..+..  .+++.|||++...+..+.|.|||||||+++   +  +|+||+||| ..|+..
T Consensus       144 ~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~C~~~  216 (240)
T 1sgf_A          144 FKYPDDLQCVNLKLLPNEDCDKAHEM--KVTDAMLCAGEMDGGSYTCEHDSGGPLICD---G--ILQGITSWGPEPCGEP  216 (240)
T ss_dssp             --------CEEEEEECTHHHHTTCSS--BCCTTEEEEEECSSSEEECCCCTTCEEEET---T--EEEEEECCCCSSCCCS
T ss_pred             CCCCccccEEeeeEeCHHHhhhhhCC--CcCCCeEeEccCCCCCCCCCCCCcCcEEEc---c--EEEEEEEECCCCCCCC
Confidence            12255688999999999999987754  468999999876555689999999999983   2  699999999 679877


Q ss_pred             CCCeEEEeCcccHHHHHHHHhhh
Q psy16044        410 GYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       410 ~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      +.|++||||+.|++||+++|+.+
T Consensus       217 ~~p~vyt~V~~~~~WI~~~~~~~  239 (240)
T 1sgf_A          217 TEPSVYTKLIKFSSWIRETMANN  239 (240)
T ss_dssp             SCCEEEEESGGGHHHHHHHHHSC
T ss_pred             CCCeEEEeHHHHHHHHHHHHhcC
Confidence            78999999999999999999754


No 48 
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.5e-47  Score=373.39  Aligned_cols=249  Identities=31%  Similarity=0.550  Sum_probs=193.7

Q ss_pred             CCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCC-CCCCCcceEEEeccccCCccC-
Q psy16044         24 QPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIF-SLPIPELWTAVLGDWDRTEEE-  101 (436)
Q Consensus        24 ~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~-~~~~~~~~~v~~g~~~~~~~~-  101 (436)
                      ..||+||..|..++|||+|+|+....    ..++|+||||+++||||||||+..... .......+.|++|.++..... 
T Consensus       163 ~~RIvgG~~a~~g~~Pw~v~l~~~~~----~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~  238 (424)
T 3nxp_A          163 DGRIVEGSDAEIGMSPWQVMLFRKSP----QELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYER  238 (424)
T ss_dssp             SSCCCCCEECCTTSCTTEEEEEETTT----TEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCT
T ss_pred             CCeeECCEECCCCCCCCEEEEeecCC----CCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCC
Confidence            56999999999999999999976432    168999999999999999999853210 011345789999998776543 


Q ss_pred             CceEEEeeeEEEeCCCCC---CCCCceeEEEeCCCCCCCCCceeeeeecCCCCC--CCCCCCcEEEEecCccCCCCCccc
Q psy16044        102 KSEVRIPVERIRVHEEFH---NYHHDIALLKLSRPTSARDKGVRAVCLTDADKR--PVNPKQQCVATGWGRVKPKGDLVS  176 (436)
Q Consensus       102 ~~~~~~~v~~i~~hp~y~---~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~--~~~~~~~~~~~GwG~~~~~~~~~~  176 (436)
                      ...+.+.|+++++||+|+   ...||||||||++|+. ++.+|+|||||.....  ....+..|+++|||.+.....   
T Consensus       239 ~~~~~~~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~-~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~---  314 (424)
T 3nxp_A          239 NIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVA-FSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWT---  314 (424)
T ss_dssp             TTCEEECEEEEEECTTCBTTTTSBTCCEEEEESSCCC-CCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHH---
T ss_pred             CceeEEEEEEEEeCCCCCCCCCCcCCeEEEEecCccc-cCCcccccCCCCcccccccccCCCeEEEEecCCCCccCc---
Confidence            235667899999999997   3679999999999999 7888999999874210  122456677777775431000   


Q ss_pred             cceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCccccc
Q psy16044        177 KLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSH  256 (436)
Q Consensus       177 ~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~  256 (436)
                                                                            .                         
T Consensus       315 ------------------------------------------------------~-------------------------  315 (424)
T 3nxp_A          315 ------------------------------------------------------A-------------------------  315 (424)
T ss_dssp             ------------------------------------------------------H-------------------------
T ss_pred             ------------------------------------------------------c-------------------------
Confidence                                                                  0                         


Q ss_pred             ccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCcccc
Q psy16044        257 RQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSK  336 (436)
Q Consensus       257 v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~  336 (436)
                                                                                             ......+..
T Consensus       316 -----------------------------------------------------------------------~~~~~~~~~  324 (424)
T 3nxp_A          316 -----------------------------------------------------------------------NVGKGQPSV  324 (424)
T ss_dssp             -----------------------------------------------------------------------C----CCSB
T ss_pred             -----------------------------------------------------------------------ccCCCCCcc
Confidence                                                                                   000112567


Q ss_pred             ceEEEEEeeCccccccccCCCccCCCCceecccCC---CCCCCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCC
Q psy16044        337 LRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD---GFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYP  412 (436)
Q Consensus       337 l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~---~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p  412 (436)
                      |+++.+++++.+.|+..+..  .++++||||+...   ...+.|+|||||||+|.. .+++|+|+||+|||.+|+..+.|
T Consensus       325 L~~~~v~ii~~~~C~~~~~~--~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~p  402 (424)
T 3nxp_A          325 LQVVNLPIVERPVCKDSTRI--RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKY  402 (424)
T ss_dssp             CEEEEEEBCCHHHHHHTCSS--CCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSC
T ss_pred             ceEEEeeEEcHHHhhhhccC--cCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCC
Confidence            99999999999999988754  5789999998643   234899999999999986 37899999999999999988889


Q ss_pred             eEEEeCcccHHHHHHHHhhh
Q psy16044        413 DVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       413 ~v~t~V~~~~~WI~~~i~~~  432 (436)
                      +|||||+.|++||+++|+..
T Consensus       403 gVyT~Vs~y~~WI~~~i~~~  422 (424)
T 3nxp_A          403 GFYTHVFRLKKWIQKVIDQF  422 (424)
T ss_dssp             EEEEECTTCHHHHHHHHHHH
T ss_pred             EEEEEHHHHHHHHHHHHHHh
Confidence            99999999999999999864


No 49 
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=100.00  E-value=3.1e-46  Score=343.64  Aligned_cols=246  Identities=31%  Similarity=0.560  Sum_probs=190.2

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCC-CCCCCcceEEEeccccCCccCC-ce
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIF-SLPIPELWTAVLGDWDRTEEEK-SE  104 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~-~~~~~~~~~v~~g~~~~~~~~~-~~  104 (436)
                      |+||++|.+++|||+|+|+.....    .++|+||||+++||||||||+..... .......+.|++|..+...... ..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~----~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~   76 (259)
T 3rm2_H            1 IVEGSDAEIGMSPWQVMLFRKSPQ----ELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIE   76 (259)
T ss_dssp             CBSCEECCTTSSTTEEEEEEETTE----EEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTC
T ss_pred             CCCCEECCCCCcCCEEEEEECCCC----ceEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcc
Confidence            789999999999999999765321    58999999999999999999853211 1113456889999987754433 34


Q ss_pred             EEEeeeEEEeCCCCC---CCCCceeEEEeCCCCCCCCCceeeeeecCCCCC--CCCCCCcEEEEecCccCCCCCccccce
Q psy16044        105 VRIPVERIRVHEEFH---NYHHDIALLKLSRPTSARDKGVRAVCLTDADKR--PVNPKQQCVATGWGRVKPKGDLVSKLR  179 (436)
Q Consensus       105 ~~~~v~~i~~hp~y~---~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~--~~~~~~~~~~~GwG~~~~~~~~~~~l~  179 (436)
                      +...|+++++||+|+   ...||||||||++|+. ++.+++|||||.....  ....+..++++|||.+......     
T Consensus        77 ~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~-----  150 (259)
T 3rm2_H           77 KISMLEKIYIHPRYNWRENLDRDIALMKLKKPVA-FSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTA-----  150 (259)
T ss_dssp             EEEEEEEEEECTTCBTTTTCBTCCEEEEESSCCC-CBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC--------
T ss_pred             eeeEEEEEEECCCCCCCCCCCCcEEEEEeCCceE-cCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCc-----
Confidence            555699999999997   3578999999999999 7788999999874211  1235677777888754311000     


Q ss_pred             eeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccc
Q psy16044        180 QIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQP  259 (436)
Q Consensus       180 ~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~  259 (436)
                                                                         .                            
T Consensus       151 ---------------------------------------------------~----------------------------  151 (259)
T 3rm2_H          151 ---------------------------------------------------N----------------------------  151 (259)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ---------------------------------------------------c----------------------------
Confidence                                                               0                            


Q ss_pred             eecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceE
Q psy16044        260 RLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQ  339 (436)
Q Consensus       260 ~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~  339 (436)
                                                                                           .....+..|++
T Consensus       152 ---------------------------------------------------------------------~~~~~~~~l~~  162 (259)
T 3rm2_H          152 ---------------------------------------------------------------------VGKGQPSVLQV  162 (259)
T ss_dssp             ------------------------------------------------------------------------CCCSBCEE
T ss_pred             ---------------------------------------------------------------------ccccccccceE
Confidence                                                                                 00111457899


Q ss_pred             EEEEeeCccccccccCCCccCCCCceecccCC---CCCCCccCCCCceeeeEec-CCcEEEEEEEEecCCCCCCCCCeEE
Q psy16044        340 IRVPLHNISVCRDKYGDSVELHGGHLCGGQLD---GFSGACIGDSGGPLQCSLK-DGRWYLAGITSFGSGCAKSGYPDVY  415 (436)
Q Consensus       340 ~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~---~~~~~c~gdsGgpl~~~~~-~~~~~l~Gi~S~~~~c~~~~~p~v~  415 (436)
                      +.+++++.+.|+..+..  .++++|||++...   ...+.|.|||||||+|... +++|+|+||+|||.+|+..+.|++|
T Consensus       163 ~~~~~~~~~~C~~~~~~--~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vy  240 (259)
T 3rm2_H          163 VNLPIVERPVCKDSTRI--RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY  240 (259)
T ss_dssp             EEEEBCCHHHHHHTCSS--CCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEE
T ss_pred             EEEEEeCHHHhhhhhcc--cCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEE
Confidence            99999999999988754  5789999997542   2348999999999999863 7899999999999999987889999


Q ss_pred             EeCcccHHHHHHHHhhh
Q psy16044        416 TKLSFYLPWIRKQINIA  432 (436)
Q Consensus       416 t~V~~~~~WI~~~i~~~  432 (436)
                      |||+.|++||+++|++.
T Consensus       241 t~V~~~~~WI~~~i~~~  257 (259)
T 3rm2_H          241 THVFRLKKWIQKVIDQF  257 (259)
T ss_dssp             EETGGGHHHHHHHHHHH
T ss_pred             EEHHHhHHHHHHHHHHc
Confidence            99999999999999864


No 50 
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=100.00  E-value=1.5e-46  Score=340.69  Aligned_cols=221  Identities=30%  Similarity=0.566  Sum_probs=171.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.+|.+++|||+|+|+..+      .++|+||||+++||||||||+.         ..+.|++|..++.......+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGsLIs~~~VLTAAHC~~---------~~~~v~~G~~~~~~~~~~~~~   65 (237)
T 1gvz_A            1 IIGGWECEKHSKPWQVAVYHQG------HFQCGGVLVHPQWVLTAAHCMS---------DDYQIWLGRHNLSKDEDTAQF   65 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECGGGCC---------SSCEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCCCeEEEEeeCC------ceEEEeEEeeCCEEEEcHHhCC---------CCCeEEEeecccccCCCCceE
Confidence            6899999999999999997542      5889999999999999999984         246899999887766666788


Q ss_pred             EeeeEEEeCCCCCC--C-----------CCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC
Q psy16044        107 IPVERIRVHEEFHN--Y-----------HHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD  173 (436)
Q Consensus       107 ~~v~~i~~hp~y~~--~-----------~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~  173 (436)
                      +.|.++++||+|+.  .           .||||||||++|+. ++..++|||||.                         
T Consensus        66 ~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~-~~~~v~picLp~-------------------------  119 (237)
T 1gvz_A           66 HQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPAR-ITDAVKILDLPT-------------------------  119 (237)
T ss_dssp             ECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCC-CBTTBCCCCCCS-------------------------
T ss_pred             EEeeeEecCCccCcccccccccccccccCCceEEEEeCCCcc-cCCcEeeeECCC-------------------------
Confidence            99999999999862  2           45555555555555 344455555544                         


Q ss_pred             ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcc
Q psy16044        174 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIR  253 (436)
Q Consensus       174 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~  253 (436)
                                                                                                      
T Consensus       120 --------------------------------------------------------------------------------  119 (237)
T 1gvz_A          120 --------------------------------------------------------------------------------  119 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCC-CCCC
Q psy16044        254 YSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVK-PKGD  332 (436)
Q Consensus       254 y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~-~~~~  332 (436)
                                                                            ...   ..++.|.++|||.+. ....
T Consensus       120 ------------------------------------------------------~~~---~~~~~~~v~GwG~~~~~~~~  142 (237)
T 1gvz_A          120 ------------------------------------------------------QEP---KLGSTCYTSGWGLISTFTNR  142 (237)
T ss_dssp             ------------------------------------------------------SCC---CTTCEEEEEEEECSCTTTCS
T ss_pred             ------------------------------------------------------CCC---CCCCEEEEECCCcccCCCCC
Confidence                                                                  321   234455555665542 2223


Q ss_pred             ccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC-CCCCCCC
Q psy16044        333 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GCAKSGY  411 (436)
Q Consensus       333 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~-~c~~~~~  411 (436)
                      .+..|+++.+++++.++|+..+..  .+++.|||++...+..+.|.|||||||+++   +  +|+||+|||. +|+..+.
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~C~~~~~  215 (237)
T 1gvz_A          143 GSGTLQCVELRLQSNEKCARAYPE--KMTEFVLCATHRDDSGSICLGDSGGALICD---G--VFQGITSWGYSECADFND  215 (237)
T ss_dssp             EEEEEEEEEEEEECGGGGCSSCGG--GCCTTEEEEECSSTTCEECGGGTTCEEEET---T--EEEEEECCCSSSCEETTT
T ss_pred             CCCccEEEEEeEeChhHhhhhhhh--cCCCceEEEeeCCCCCccCCCCccCcEeeC---C--EEEEEEEeCCCCCCCCCC
Confidence            456789999999999999988754  478999999876666689999999999984   2  5999999997 7986678


Q ss_pred             CeEEEeCcccHHHHHHHHhhh
Q psy16044        412 PDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       412 p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      |++||||++|++||+++|+++
T Consensus       216 p~vyt~V~~~~~WI~~~~~~~  236 (237)
T 1gvz_A          216 NFVFTKVMPHKKWIKETIEKN  236 (237)
T ss_dssp             SCCEEESGGGHHHHHHHHHHH
T ss_pred             CcEEEEHHHHHHHHHHHHhcc
Confidence            999999999999999999864


No 51 
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=100.00  E-value=3.7e-46  Score=335.01  Aligned_cols=220  Identities=28%  Similarity=0.480  Sum_probs=186.2

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+.....  . .++|+||||+++||||||||+..         .+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~--~-~~~CgGsLI~~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   68 (224)
T 1cgh_A            1 IIGGRESRPHSRPYMAYLQIQSPA--G-QSRCGGFLVREDFVLTAAHCWGS---------NINVTLGAHNIQRRENTQQH   68 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEESTTT--T-SCEEEEEEEETTEEEECGGGCCS---------SEEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCCCcEEEEEEECCC--C-CeEEEEEEeeCCEEEEhHHhCCC---------CCEEEEeecccCCCCCccEE
Confidence            689999999999999999875321  1 58999999999999999999853         36899999887765556788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||.... ....+..++++|||.+. .+..+..|++..++
T Consensus        69 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG~~~-~~~~~~~l~~~~~~  145 (224)
T 1cgh_A           69 ITARRAIRHPQYNQRTIQNDIMLLQLSRRVR-RNRNVNPVALPRAQE-GLRPGTLCTVAGWGRVS-MRRGTDTLREVQLR  145 (224)
T ss_dssp             EEEEEEEECTTCBTTTTBSCCEEEEESSCCC-CBTTBCCCBCCCTTC-CCCTTCEEEEEESCCSS-SSCCCSBCEEEEEE
T ss_pred             EEEEEEEcCCCCCCCCCcCCEEEEEECCCCc-CCCceEeeECCCCCC-CCCCCCEEEEEECCcCC-CCCCCCcceEEEEE
Confidence            9999999999997  4689999999999999 778899999998643 34578999999999887 44556789999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                      +++.++|...+..  ...+.|||++...+..+.|.|||||||++++     +|+||+|||..++..+.+|++|..|..||
T Consensus       146 i~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~~~~p~vyt~V~~~~~WI  218 (224)
T 1cgh_A          146 VQRDRQCLRIFGS--YDPRRQICVGDRRERKAAFKGDSGGPLLCNN-----VAHGIVSYGKSSGVPPEVFTRVSSFLPWI  218 (224)
T ss_dssp             BCCHHHHHHHCTT--CCTTTEEEECCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECCTTCCSCEEEEEGGGGHHHH
T ss_pred             eeCHHHHHHHhCc--CCCcceEeeccCCCCCeEeeCCCccceEEcc-----EEEEEEEEECCCCCCCeEEEEHHHhHHHH
Confidence            9999999988743  2345699999876668999999999999842     79999999985456688999999999999


Q ss_pred             cccc
Q psy16044        265 KESI  268 (436)
Q Consensus       265 ~~~~  268 (436)
                      .+.+
T Consensus       219 ~~~~  222 (224)
T 1cgh_A          219 RTTM  222 (224)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8754


No 52 
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=100.00  E-value=3.9e-46  Score=337.22  Aligned_cols=223  Identities=30%  Similarity=0.503  Sum_probs=186.6

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+..        ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~--------~~~~v~~G~~~~~~~~~~~~~   66 (234)
T 1orf_A            1 IIGGNEVTPHSRPYMVLLSLDR------KTICAGALIAKDWVLTAAHCNLN--------KRSQVILGAHSITREEPTKQI   66 (234)
T ss_dssp             CBSCEECCTTSSTTEEEEECSS------SCEEEEEEEETTEEEECTTCCCC--------TTCEEEESCSBSSSCCTTCEE
T ss_pred             CCCCEECCCCCCCeEEEEccCC------ceEEEEEEeeCCEEEEchhcCCC--------CCceEEEeccccCcCCCceEE
Confidence            7899999999999999998642      68899999999999999999864        346899999887665556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++.+++|||||... .....+..++++|||.+...+..+..|+++.++
T Consensus        67 ~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  144 (234)
T 1orf_A           67 MLVKKEFPYPCYDPATREGDLKLLQLTEKAK-INKYVTILHLPKKG-DDVKPGTMCQVAGWGRTHNSASWSDTLREVEIT  144 (234)
T ss_dssp             ECEEEEEECTTCCTTTCTTCCEEEEESSCCC-CSSSSCCCCCCSSC-CCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEE
T ss_pred             EEEEEEEcCCCCCCCCCCCCEEEEEECCcCc-cCCCeeeeecCCCc-CCCCCCCEEEEEECCcCCCCCCccccceEeEEE
Confidence            9999999999997  4789999999999999 78889999999853 334578899999999988666667889999999


Q ss_pred             ccchhhhh--hhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcC-CCCCC---Cccccccc
Q psy16044        185 LHNISVCR--DKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GYCGV---GIRYSHRQ  258 (436)
Q Consensus       185 ~~~~~~C~--~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~-~~C~~---~~~y~~v~  258 (436)
                      +++.+.|+  ..+.......+.||||+...+..++|.|||||||+++   +  +|+||+|||. ..|+.   +.+|++|.
T Consensus       145 ~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~~C~~~~~p~vyt~v~  219 (234)
T 1orf_A          145 IIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCE---G--VFRGVTSFGLENKCGDPRGPGVYILLS  219 (234)
T ss_dssp             EECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEET---T--EEEEEEEECCTTCTTCTTSCEEEEECC
T ss_pred             eeCHHHcCCccccccCCccCCCEEEecCCCCCCcCCCCCCCCeEEEC---C--EEEEEEEEcCCCCCCCCCCCCEEEEch
Confidence            99999998  4443111233489999976666899999999999984   2  6999999998 24754   68999999


Q ss_pred             -ceecCCccccCC
Q psy16044        259 -PRLINGKESIRG  270 (436)
Q Consensus       259 -~~~~~~~~~~~~  270 (436)
                       .|..||.+.+..
T Consensus       220 ~~~~~WI~~~~~~  232 (234)
T 1orf_A          220 KKHLNWIIMTIKG  232 (234)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHh
Confidence             999999877653


No 53 
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=100.00  E-value=8e-46  Score=332.68  Aligned_cols=220  Identities=33%  Similarity=0.610  Sum_probs=178.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+. +     ..++|+||||+++||||||||+.         ..+.|++|..+...  ...+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-~-----~~~~CgGtLI~~~~VLTAAHC~~---------~~~~v~~G~~~~~~--~~~~~   63 (224)
T 2qxi_A            1 IIDGAPCARGSHPWQVALLS-G-----NQLHCGGVLVNERWVLTAAHCKM---------NEYTVHLGSDTLGD--RRAQR   63 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEE-T-----TEEEEEEEEEETTEEEECGGGCC---------SCEEEEESCSBTTC--TTSEE
T ss_pred             CCCCeECCCCCCCCEEEEee-C-----CCeEEEEEEecCCEEEEhHHcCC---------CCcEEEEeeeecCC--CccEE
Confidence            68999999999999999952 1     13489999999999999999983         34689999877652  33477


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||...   ...+..++++|||.+..              
T Consensus        64 ~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picL~~~~---~~~~~~~~v~GwG~~~~--------------  125 (224)
T 2qxi_A           64 IKASKSFRHPGYSTQTHVNDLMLVKLNSQAR-LSSMVKKVRLPSRC---EPPGTTCTVSGWGTTTS--------------  125 (224)
T ss_dssp             EEECEEEECTTCCTTTCTTCCEEEECSSCCC-CBTTBCCCCCCSSC---CCTTCEEEEEESSCSSS--------------
T ss_pred             EEEEEEEECCCCCCCCCcCcEEEEEeCCCCc-CCCceeeEECCCCC---CCCCCEEEEEeCCccCC--------------
Confidence            8999999999997  4679999999999999 67789999998742   23566677777764320              


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (224)
T 2qxi_A          126 --------------------------------------------------------------------------------  125 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEe
Q psy16044        265 KESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPL  344 (436)
Q Consensus       265 ~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~  344 (436)
                                                                                      .....+..|+++.+++
T Consensus       126 ----------------------------------------------------------------~~~~~~~~L~~~~~~~  141 (224)
T 2qxi_A          126 ----------------------------------------------------------------PDVTFPSDLMCVDVKL  141 (224)
T ss_dssp             ----------------------------------------------------------------SSCCCCSBCEEEEEEE
T ss_pred             ----------------------------------------------------------------CCCCCChhheEEEeee
Confidence                                                                            0011245688999999


Q ss_pred             eCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccHH
Q psy16044        345 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       345 ~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~~  423 (436)
                      ++.++|+..+..  .+.+.|||++...+..+.|.|||||||+++   +  +|+||+||| ..|+..+.|++||||++|++
T Consensus       142 ~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~  214 (224)
T 2qxi_A          142 ISPQDCTKVYKD--LLENSMLCAGIPDSKKNACNGDSGGPLVCR---G--TLQGLVSWGTFPCGQPNDPGVYTQVCKFTK  214 (224)
T ss_dssp             ECHHHHHHHHGG--GCCTTEEEEECTTCCCBCCTTCTTCEEEET---T--EEEEEEEECCSSSCCTTCCEEEEEGGGSHH
T ss_pred             cCHHHhhHHhcC--cCCCCeEEecCCCCCCccCCCCccccEEEC---C--EEEEEEEeCCCCCCCCCCCeEEEEHHHHHH
Confidence            999999988754  468999999876566789999999999994   2  599999999 68987778999999999999


Q ss_pred             HHHHHHhhh
Q psy16044        424 WIRKQINIA  432 (436)
Q Consensus       424 WI~~~i~~~  432 (436)
                      ||+++|+++
T Consensus       215 WI~~~~~~~  223 (224)
T 2qxi_A          215 WINDTMKKH  223 (224)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHhcc
Confidence            999999753


No 54 
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=100.00  E-value=1.2e-45  Score=334.37  Aligned_cols=219  Identities=34%  Similarity=0.665  Sum_probs=169.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+.        .++|+||||+++||||||||+.         ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~--------~~~CgGsLIs~~~VLTAAHC~~---------~~~~v~~G~~~~~~~~~~~~~   63 (235)
T 1ton_A            1 IVGGYKCEKNSQPWQVAVIN--------EYLCGGVLIDPSWVITAAHCYS---------NNYQVLLGRNNLFKDEPFAQR   63 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEES--------SSEEEEEEEETTEEEECGGGCC---------SCCEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCcCcEEEEcc--------CCeEEEEEecCCEEEEcHHhCC---------CCcEEEeCcccccCCCCcceE
Confidence            68999999999999999974        1789999999999999999984         246899999887655555688


Q ss_pred             EeeeEEEeCCCCCC-------------CCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCC
Q psy16044        107 IPVERIRVHEEFHN-------------YHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD  173 (436)
Q Consensus       107 ~~v~~i~~hp~y~~-------------~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~  173 (436)
                      +.|+++++||+|+.             ..+|||||||++|+. ++..++|||||.                         
T Consensus        64 ~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~-~~~~v~picL~~-------------------------  117 (235)
T 1ton_A           64 RLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPAD-ITGGVKVIDLPT-------------------------  117 (235)
T ss_dssp             ECEEEEEECTTCCCC--------CCCCSTTCCEEEEESSCCC-CCSSCCCCCCCC-------------------------
T ss_pred             EEEEEEEeCCCCcccccccccccccCCCcCCEEEEEcCCccc-cCCcceeeeCCC-------------------------
Confidence            89999999999953             245555555555555 444555555554                         


Q ss_pred             ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcc
Q psy16044        174 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIR  253 (436)
Q Consensus       174 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~  253 (436)
                                                                                                      
T Consensus       118 --------------------------------------------------------------------------------  117 (235)
T 1ton_A          118 --------------------------------------------------------------------------------  117 (235)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCC-CC
Q psy16044        254 YSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK-GD  332 (436)
Q Consensus       254 y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~-~~  332 (436)
                                                                            ...   ..++.|.++|||.+... ..
T Consensus       118 ------------------------------------------------------~~~---~~~~~~~v~GwG~~~~~~~~  140 (235)
T 1ton_A          118 ------------------------------------------------------KEP---KVGSTCLASGWGSTNPSEMV  140 (235)
T ss_dssp             ------------------------------------------------------SCC---CTTCEEEEEESSCSSSSSCC
T ss_pred             ------------------------------------------------------CCC---CCCCEEEEEecCCCCCCCCc
Confidence                                                                  221   23444555555544322 22


Q ss_pred             ccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCC
Q psy16044        333 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGY  411 (436)
Q Consensus       333 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~  411 (436)
                      .+..|+++.+++++.++|+..+..  .+++.|||++...+..+.|.|||||||+++   +  +|+||+||| ..|+..+.
T Consensus       141 ~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~  213 (235)
T 1ton_A          141 VSHDLQCVNIHLLSNEKCIETYKD--NVTDVMLCAGEMEGGKDTCAGDSGGPLICD---G--VLQGITSGGATPCAKPKT  213 (235)
T ss_dssp             CCSBCEEEEEEEECGGGCGGGGST--TGGGGEEEEECTTCSCBCCTTCTTCEEEET---T--EEEEEECCCCSSCSCTTC
T ss_pred             cCccceEEEEEEeCHHHHHHHhcC--cCCCCeEeeccCCCCCcCCCCCCccccEEC---C--EEEEEEeeCCCCCCCCCC
Confidence            356799999999999999998865  468899999876566789999999999983   2  699999999 57987778


Q ss_pred             CeEEEeCcccHHHHHHHHhhh
Q psy16044        412 PDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       412 p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      |++||||+.|++||+++|+++
T Consensus       214 p~vyt~V~~~~~WI~~~~~~~  234 (235)
T 1ton_A          214 PAIYAKLIKFTSWIKKVMKEN  234 (235)
T ss_dssp             CEEEEEGGGGHHHHHHHHHHC
T ss_pred             CeEEEEHHHHHHHHHHHHccC
Confidence            999999999999999999764


No 55 
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=100.00  E-value=4.1e-46  Score=337.68  Aligned_cols=227  Identities=30%  Similarity=0.588  Sum_probs=189.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+....  +...++|+||||+++||||||||+..       ...+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~--~~~~~~CgGtLIs~~~VLTAAHC~~~-------~~~~~V~~G~~~~~~~~~~~~~   71 (236)
T 1elt_A            1 VVGGRVAQPNSWPWQISLQYKSG--SSYYHTCGGSLIRQGWVMTAAHCVDS-------ARTWRVVLGEHNLNTNEGKEQI   71 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEET--TEEEEEEEEEEEETTEEEECHHHHSS-------CCCEEEEESCSBTTSCCSCCEE
T ss_pred             CCCCEECCCCCCCCEEEEEEecC--CceeeEEEEEEEeCCEEEECHHhhCC-------cCceEEEEccccCCCCCCCcEE
Confidence            68999999999999999987532  11248899999999999999999864       2567899999887766556688


Q ss_pred             EeeeEEEeCCCCCC--C--CCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        107 IPVERIRVHEEFHN--Y--HHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~~--~--~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.|+++++||+|+.  .  .+|||||||++|+. ++..++|||||.... ....+..++++|||.+...+..+..|++..
T Consensus        72 ~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~-~~~~v~picL~~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~  149 (236)
T 1elt_A           72 MTVNSVFIHSGWNSDDVAGGYDIALLRLNTQAS-LNSAVQLAALPPSNQ-ILPNNNPCYITGWGKTSTGGPLSDSLKQAW  149 (236)
T ss_dssp             ECEEEEEECTTCCTTCGGGCCCCEEEEESSCCC-CSSSCCCCCCCCTTC-CCCTTCCEEEEESCCSSTTCCCCSBCEEEE
T ss_pred             EEEEEEEECCCCCCCCCCCCccEEEEECCCCCc-cCCcEEeccCCCccc-cCCCCCEEEEEeCCCcCCCCCcChhheEeE
Confidence            99999999999973  3  78999999999999 778899999998533 345788999999999876666678899999


Q ss_pred             eeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcC-CCCC---CCccccccc
Q psy16044        183 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GYCG---VGIRYSHRQ  258 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~-~~C~---~~~~y~~v~  258 (436)
                      +++++.+.|+..+.......+.|||++.. + .+.|.|||||||++.. +++|+|+||+|||. ..|+   .+.+|++|.
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~-~-~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~  226 (236)
T 1elt_A          150 LPSVDHATCSSSGWWGSTVKTTMVCAGGG-A-NSGCNGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNASKKPTVFTRVS  226 (236)
T ss_dssp             CCEECHHHHTSTTTTGGGSCTTEEEECCS-S-CBCCTTCTTCEEEEEE-TTEEEEEEEEEECCSSCTTCTTCCEEEEEGG
T ss_pred             eeecCHHHhccccccCCcCCcceEEecCC-C-CccCCCCCCCeeEEEE-CCEEEEEEEEEEeCCCCCCCCCCCeEEEEHH
Confidence            99999999987643223456799999843 3 7899999999999985 78999999999995 2465   468999999


Q ss_pred             ceecCCccc
Q psy16044        259 PRLINGKES  267 (436)
Q Consensus       259 ~~~~~~~~~  267 (436)
                      .|..||.+.
T Consensus       227 ~~~~WI~~~  235 (236)
T 1elt_A          227 AYISWMNGI  235 (236)
T ss_dssp             GGHHHHHHH
T ss_pred             HhHHHHHhh
Confidence            999999764


No 56 
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=100.00  E-value=5.4e-47  Score=344.91  Aligned_cols=230  Identities=26%  Similarity=0.430  Sum_probs=184.8

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|..        .++|+||||+++||||||||+............+.|++|..+..... ..+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~--------~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~-~~~~   71 (242)
T 2qy0_B            1 IIGGQKAKMGNFPWQVFTNI--------HGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELM-KLGN   71 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEES--------SSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHH-HHCC
T ss_pred             CCCCEECCCCCCCcEEEEcc--------CCCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeeccccccc-cccc
Confidence            78999999999999999964        35799999999999999999975322222345678999986643221 1245


Q ss_pred             EeeeEEEeCCCCC-----CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceee
Q psy16044        107 IPVERIRVHEEFH-----NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQI  181 (436)
Q Consensus       107 ~~v~~i~~hp~y~-----~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~  181 (436)
                      +.|+++++||+|+     ...||||||||++|+. ++.+++|||||... .....+..++++|||.+...  .+..|+++
T Consensus        72 ~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~--~~~~L~~~  147 (242)
T 2qy0_B           72 HPIRRVSVHPDYRQDESYNFEGDIALLELENSVT-LGPNLLPICLPDND-TFYDLGLMGYVSGFGVMEEK--IAHDLRFV  147 (242)
T ss_dssp             CCEEEEEECTTCCTTCSSCCTTCCEEEEESSCCC-CBTTBCCCBCCCSG-GGGCTTCEEEEEECCCCSSS--CCSBCEEE
T ss_pred             eeEEEEEECCCCccCcCCCCCCcEEEEEECCCCc-CCCCcceeecCCCc-cccCCCCeEEEEeeccCCCc--CCccceEE
Confidence            6899999999997     3578999999999999 77889999999753 23456889999999988643  56789999


Q ss_pred             eeeccchhhhhhhcCC---CcCCcCCeEEeccCCCCCCCccCCCCCeeeeE-ecCCcEEEEEEEeEcCCCCCCCcccccc
Q psy16044        182 RVPLHNISVCRDKYGD---SVELHGGHLCGGQLDGFSGACIGDSGGPLQCS-LKDGRWYLAGITSFGSGYCGVGIRYSHR  257 (436)
Q Consensus       182 ~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~-~~~~~~~l~GI~S~g~~~C~~~~~y~~v  257 (436)
                      .+++++.+.|+..+..   .....+.||||+...+..++|.|||||||++. ..+++|+|+||+|||.+|...+.+|++|
T Consensus       148 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~vyt~V  227 (242)
T 2qy0_B          148 RLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKV  227 (242)
T ss_dssp             EEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSSCEEEEEG
T ss_pred             EEEEeCHHHHHHHhccccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCCCCcEEEEH
Confidence            9999999999987632   12356799999987666899999999999996 3578999999999998744457899999


Q ss_pred             cceecCCccccC
Q psy16044        258 QPRLINGKESIR  269 (436)
Q Consensus       258 ~~~~~~~~~~~~  269 (436)
                      .+|..||.+.+.
T Consensus       228 ~~y~~WI~~~~~  239 (242)
T 2qy0_B          228 LNYVDWIKKEME  239 (242)
T ss_dssp             GGGHHHHHHHTT
T ss_pred             HHHHHHHHHHhh
Confidence            999999988765


No 57 
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=100.00  E-value=9.6e-47  Score=358.85  Aligned_cols=236  Identities=25%  Similarity=0.497  Sum_probs=183.7

Q ss_pred             CCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEE
Q psy16044         12 RDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAV   91 (436)
Q Consensus        12 ~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~   91 (436)
                      +.||+.........||+||.+|..++|||+|+|.         .++|+||||+++||||||||+...       ....|+
T Consensus        68 ~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~---------~~~CgGsLIs~~~VLTAAHC~~~~-------~~~~v~  131 (333)
T 1elv_A           68 PVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFD---------NPWAGGALINEYWVLTAAHVVEGN-------REPTMY  131 (333)
T ss_dssp             ECCSCCSSCC-----CBTCEECCGGGSTTEEEEE---------TTEEEEEEEETTEEEECHHHHTTC-------SSCCEE
T ss_pred             CCcCCCCCcccccceeecCcccCCCCcCeEEEec---------CCceeEEEecCCEEEehhheeCCC-------CCCeEE
Confidence            4799765544456799999999999999999993         237999999999999999999653       123788


Q ss_pred             eccccCCccCCceEEEee---eEEEeCCCCCC---------CCCceeEEEeCCCCCCCCCceeeeeecCCCCC-CCCCCC
Q psy16044         92 LGDWDRTEEEKSEVRIPV---ERIRVHEEFHN---------YHHDIALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQ  158 (436)
Q Consensus        92 ~g~~~~~~~~~~~~~~~v---~~i~~hp~y~~---------~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~-~~~~~~  158 (436)
                      +|.++...  ...+.+.|   +++++||+|+.         ..||||||||++|+. ++.+++|||||..... .+..+.
T Consensus       132 ~G~~~~~~--~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~~v~-~~~~v~PicLp~~~~~~~~~~g~  208 (333)
T 1elv_A          132 VGSTSVQT--SRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVK-MGPTVSPICLPGTSSDYNLMDGD  208 (333)
T ss_dssp             CSCSBCC---------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCC-CBTTBCCCBCCCSSGGGCCCTTC
T ss_pred             Eeeeeccc--CccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCCCCc-CCCcccceecCCCcccccccCCc
Confidence            99876632  22344555   99999999972         579999999999999 7888999999975322 244688


Q ss_pred             cEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCC-------cCCcCCeEEeccCCCCCCCccCCCCCeeeeEec
Q psy16044        159 QCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDS-------VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLK  231 (436)
Q Consensus       159 ~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~-------~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~  231 (436)
                      .++++|||.+... ..+..|+++.+.+++.+.|+..+...       ...+++||||+... +.++|+|||||||++...
T Consensus       209 ~~~v~GWG~t~~~-~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~-~~~~C~GDSGGPL~~~~~  286 (333)
T 1elv_A          209 LGLISGWGRTEKR-DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEK-GMDSCKGDSGGAFAVQDP  286 (333)
T ss_dssp             EEEEEESCCCSSC-SSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEEEEECST-TCBCCTTCTTCEEEEECS
T ss_pred             EEEEEECcCcCCC-CcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeECccCCC-CCCcCcCcCCCceEEEEC
Confidence            9999999988753 45678999999999999999876432       24567999998766 589999999999999743


Q ss_pred             -CC-cEEEEEEEeEcCCCCCCCcccccccceecCCccccC
Q psy16044        232 -DG-RWYLAGITSFGSGYCGVGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       232 -~~-~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~~~~~~  269 (436)
                       ++ +|+|+||+|||.+ |+.+.+|++|..|..||.+.+.
T Consensus       287 ~~~~~~~l~GIvS~g~~-C~~~~vyt~V~~y~~WI~~~~~  325 (333)
T 1elv_A          287 NDKTKFYAAGLVSWGPQ-CGTYGLYTRVKNYVDWIMKTMQ  325 (333)
T ss_dssp             SCTTCEEEEEEEEECSS-TTSEEEEEEGGGGHHHHHHHHH
T ss_pred             CCCcEEEEEEEEeeCCC-CCCCcEEeEHHHHHHHHHHHHh
Confidence             34 8999999999987 6668999999999999987654


No 58 
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=100.00  E-value=6.6e-46  Score=334.16  Aligned_cols=223  Identities=27%  Similarity=0.475  Sum_probs=186.6

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+.....  . .++|+||||+++||||||||+..         .+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~--~-~~~CgGtLI~~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   68 (227)
T 1iau_A            1 IIGGHEAKPHSRPYMAYLMIWDQK--S-LKRCGGFLIRDDFVLTAAHCWGS---------SINVTLGAHNIKEQEPTQQF   68 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECSS--C-EEEEEEEEEETTEEEECGGGCCS---------EEEEEESCSBTTSCCTTCEE
T ss_pred             CCCCeECCCCCcCcEEEEEEECCC--C-ceEEEEEEEcCCEEEECHHhCCC---------ceEEEEccccccCCCCccEE
Confidence            789999999999999999875321  1 48999999999999999999853         37899999887766566788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||... ..+..+..++++|||.+...+..+..|+++.++
T Consensus        69 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picLp~~~-~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~  146 (227)
T 1iau_A           69 IPVKRPIPHPAYNPKNFSNDIMLLQLERKAK-RTRAVQPLRLPSNK-AQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMT  146 (227)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CBTTBCCCCCCCTT-CCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEE
T ss_pred             EEEEEEECCCCCCCCCCCCCeEEEEECCccc-CCCceecccCCCCC-CCCCCCCEEEEEEcccCCCCCCcCceeeEeeee
Confidence            9999999999997  4689999999999999 77889999999853 334578999999999988666677889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                      +++.+.|+..+.... ..+.|+|++...+..+.|.|||||||++++     +|+||+|||-+....+.+|++|..|..||
T Consensus       147 i~~~~~C~~~~~~~~-~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~gc~~~~~p~vyt~v~~~~~WI  220 (227)
T 1iau_A          147 VQEDRKCESDLRHYY-DSTIELCVGDPEIKKTSFKGDSGGPLVCNK-----VAQGIVSYGRNNGMPPRACTKVSSFVHWI  220 (227)
T ss_dssp             BCCHHHHHHHTTTTC-CTTTEEEESCTTSCCBCCTTCTTSEEEETT-----EEEEEEEEECTTSCSCEEEEEGGGGHHHH
T ss_pred             eechHHhhhHhcccc-CCCcEEEeECCCCCCeeeecCCCchheEee-----EEEEEEeEecCCCCCCeEEEEHHHHHHHH
Confidence            999999998875432 334599999877668999999999999842     79999999921113578999999999999


Q ss_pred             ccccC
Q psy16044        265 KESIR  269 (436)
Q Consensus       265 ~~~~~  269 (436)
                      .+.+.
T Consensus       221 ~~~~~  225 (227)
T 1iau_A          221 KKTMK  225 (227)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            87653


No 59 
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=100.00  E-value=2.6e-46  Score=362.81  Aligned_cols=239  Identities=31%  Similarity=0.517  Sum_probs=195.2

Q ss_pred             CCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEe
Q psy16044         13 DCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVL   92 (436)
Q Consensus        13 ~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~   92 (436)
                      .||.     ....||+||++|..++|||+|+|++...  +...++|+||||+++||||||||+...     ....+.|++
T Consensus       110 ~CG~-----~~~~rIvgG~~a~~~e~Pw~v~L~~~~~--g~~~~~CGGsLIs~~~VLTAAHCv~~~-----~~~~~~V~l  177 (408)
T 2xxl_A          110 DCGN-----FLSQRVSNGYEVKLSSRPWMALLRYQQF--GESRFLCGGAMISERYILTAAHCVHGL-----QNDLYEIRL  177 (408)
T ss_dssp             CCSC-----CCCCCCCSSCBCCTTSSTTEEEEEEECS--SSEEEEEEEEEEETTEEEECGGGTTTC-----TTTEEEEEE
T ss_pred             ccCC-----CCCCceECCEECCCCCCCcEEEEEeecC--CceeEEEEEEEEECCEEEEcHHhcCCC-----CCceEEEEe
Confidence            7992     2357999999999999999999987542  222689999999999999999999653     235689999


Q ss_pred             ccccCCccC------------CceEEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCC--CCCCC
Q psy16044         93 GDWDRTEEE------------KSEVRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADK--RPVNP  156 (436)
Q Consensus        93 g~~~~~~~~------------~~~~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~--~~~~~  156 (436)
                      |.++.....            ...+.+.|+++++||+|+  ...||||||||++|+. ++.+++|||||....  .....
T Consensus       178 G~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~-~~~~V~PICLp~~~~~~~~~~~  256 (408)
T 2xxl_A          178 GEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVP-FQKHIKPICLPITDELKEKAEQ  256 (408)
T ss_dssp             SCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCC-CBTTBCCCBCCCSHHHHHHTTT
T ss_pred             eeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccceEEEEECCccc-cccCccccCCCCcccccccccC
Confidence            998765433            234778899999999997  4689999999999999 788999999997532  11346


Q ss_pred             CCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCee------eeEe
Q psy16044        157 KQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPL------QCSL  230 (436)
Q Consensus       157 ~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl------~~~~  230 (436)
                      +..++++|||.+.... .+..|+++.+++++.+.|+..+....  ...||||+... +.++|.|||||||      ++. 
T Consensus       257 ~~~~~v~GWG~t~~~~-~s~~L~~~~v~iv~~~~C~~~~~~~~--~~~~iCAg~~~-g~d~C~GDSGGPL~~~~~~~~~-  331 (408)
T 2xxl_A          257 ISTYFVTGWGTTENGS-SSDVLLQANVPLQPRSACSQAYRRAV--PLSQLCVGGGD-LQDSCKGDSGGPLQAPAQYLGE-  331 (408)
T ss_dssp             CSEEEEEECCCBTTBC-SCSBCEEEEEEEECHHHHHHHHTSCC--CTTEEEECCSC-SSSGGGSCTTCEEEEEECCTTC-
T ss_pred             CCEEEEEEeCcCCCCC-CCchheEeeeeecCHHHHHHHhcccC--CCceEeecCCC-CCccCCCcccChhhcCccceEE-
Confidence            7899999999987544 57789999999999999999886542  34899998765 4799999999999      544 


Q ss_pred             cCCcEEEEEEEeEcCCCCCC---CcccccccceecCCccccC
Q psy16044        231 KDGRWYLAGITSFGSGYCGV---GIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       231 ~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~~~~~~~~~~~  269 (436)
                      .+++|+|+||+|||...|+.   +.+||+|..|..||.+.+.
T Consensus       332 ~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~  373 (408)
T 2xxl_A          332 YAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTMA  373 (408)
T ss_dssp             SSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHHHHH
T ss_pred             ECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            36789999999999544753   6799999999999987764


No 60 
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=100.00  E-value=4.8e-46  Score=335.46  Aligned_cols=222  Identities=28%  Similarity=0.515  Sum_probs=186.8

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.+|.+++|||+|+|+..+      .++|+||||+++||||||||+...     ....+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~~-----~~~~~~v~~G~~~~~~~~~~~~~   69 (228)
T 2xw9_A            1 ILGGREAEAHARPYMASVQLNG------AHLCGGVLVAEQWVLSAAHCLEDA-----ADGKVQVLLGAHSLSQPEPSKRL   69 (228)
T ss_dssp             CBCC-CCCTTSCTTEEEEEETT------EEEEEEEEEETTEEEECGGGGSSC-----TTCCEEEEESCSBSSSCCTTCEE
T ss_pred             CCCCeECCCCCCCcEEEEEECC------CeEEEEEEEeCCEEEEcHHhCCCC-----CCCceEEEEcccccCCCCCcceE
Confidence            6899999999999999998643      689999999999999999999653     24568999999887765555688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|.++++||+|+  ...||||||||++|+. ++..++|+|||..+ .....+..++++|||.+...+..+..|++..++
T Consensus        70 ~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~-~~~~v~pi~l~~~~-~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~  147 (228)
T 2xw9_A           70 YDVLRAVPHPDSQPDTIDHDLLLLQLSEKAT-LGPAVRPLPWQRVD-RDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLP  147 (228)
T ss_dssp             EEEEEEEECTTCCTTCCTTCCEEEEESSCCC-CBTTBCCCCBCCSC-CCCCTTC-CEEEESSCCSTTCCCCSBCEEEECC
T ss_pred             EEEEEEEeCCCCCCCCCCCcEEEEEeCCCcc-cCCCeeecccCCcc-cCCCCCCEEEEEEecccCCCCCCCchheEEEEE
Confidence            8999999999997  4689999999999999 77889999999853 334578899999999988766667889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---Cccccccccee
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---GIRYSHRQPRL  261 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~~~  261 (436)
                      +++.++|+..+.......+.|||++.  +..+.|.|||||||+++   +  +|+||+|||...|+.   +.+|++|..|.
T Consensus       148 ~~~~~~C~~~~~~~~~~~~~~~Ca~~--~~~~~C~GDsGgPL~~~---~--~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~  220 (228)
T 2xw9_A          148 VLDRATCNRRTHHDGAITERLMCAES--NRRDSCKGDAGGPLVCG---G--VLEGVVTSGSRVCGNRKKPGIYTRVASYA  220 (228)
T ss_dssp             EECHHHHTSTTTTTTCCCTTEEEECC--SSCBCCTTCTTCEEEET---T--EEEEEECCSCCCSSCTTSCEEEEEGGGGH
T ss_pred             EcChhHhcCccccCCcccCCEEecCC--CCCccCCCCCcccEEEC---C--EEEEEEeecCCcCCCCCCCcEEEEHHHHH
Confidence            99999999877643456779999986  34789999999999984   2  799999999855754   67999999999


Q ss_pred             cCCcccc
Q psy16044        262 INGKESI  268 (436)
Q Consensus       262 ~~~~~~~  268 (436)
                      .||.+.+
T Consensus       221 ~WI~~~i  227 (228)
T 2xw9_A          221 AWIDSVL  227 (228)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998754


No 61 
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=100.00  E-value=7.9e-46  Score=332.94  Aligned_cols=219  Identities=26%  Similarity=0.493  Sum_probs=184.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+...     ....+.|++|..+...   ..+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLI~~~~VLTAAHC~~~~-----~~~~~~v~~G~~~~~~---~~~~   66 (224)
T 1pq7_A            1 IVGGTSASAGDFPFIVSISRNG------GPWCGGSLLNANTVLTAAHCVSGY-----AQSGFQIRAGSLSRTS---GGIT   66 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECHHHHTTS-----CGGGEEEEESCSBSSS---SSEE
T ss_pred             CCCCEECCCCCcCeEEEEEECC------CeEEEEEEecCCEEEEcHHccCCC-----CCCceEEEeCcceecC---CCEE
Confidence            6899999999999999998532      689999999999999999999652     2456899999877632   3477


Q ss_pred             EeeeEEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCC-Cccccceeeeeec
Q psy16044        107 IPVERIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRVPL  185 (436)
Q Consensus       107 ~~v~~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~-~~~~~l~~~~~~~  185 (436)
                      +.|+++++||+|+...+|||||||++|+. ++.+++|||||..... ...+..++++|||.+...+ ..+..|+++.+++
T Consensus        67 ~~v~~i~~hp~y~~~~~DiALl~L~~~~~-~~~~v~picL~~~~~~-~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~  144 (224)
T 1pq7_A           67 SSLSSVRVHPSYSGNNNDLAILKLSTSIP-SGGNIGYARLAASGSD-PVAGSSATVAGWGATSEGGSSTPVNLLKVTVPI  144 (224)
T ss_dssp             ECEEEEEECTTCBTTBTCCEEEEESSCCC-CBTTBCCCCBCCTTCC-CCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEE
T ss_pred             EEEEEEEECCCCCCCCCCEEEEEeCCCCc-CCCcccceecCCcccC-CCCCCEEEEEecCCcCCCCCcccceeeEeEEEE
Confidence            89999999999986689999999999999 7788999999953222 3578999999999987655 5567899999999


Q ss_pred             cchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---Ccccccccceec
Q psy16044        186 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---GIRYSHRQPRLI  262 (436)
Q Consensus       186 ~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~~~~  262 (436)
                      ++.+.|+..+.. ....+.|||++...+..++|.|||||||++.  ++  +|+||+|||.+ |+.   +.+|++|..|..
T Consensus       145 ~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~--~g--~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~  218 (224)
T 1pq7_A          145 VSRATCRAQYGT-SAITNQMFCAGVSSGGKDSCQGDSGGPIVDS--SN--TLIGAVSWGNG-CARPNYSGVYASVGALRS  218 (224)
T ss_dssp             ECHHHHHHHHCT-TTSCTTEEEECCTTCCCBCCTTCTTCEEECT--TC--CEEEEEEECSS-SSCTTCCEEEEETTTSHH
T ss_pred             EcHHHhhHhhcC-CCCCCCeEEeecCCCCCCCCcCCCCcceECc--CC--eEEEEEEeCCC-CCCCCCCeEEEEHHHHHH
Confidence            999999988752 2356799999876667899999999999984  33  69999999987 543   679999999999


Q ss_pred             CCccc
Q psy16044        263 NGKES  267 (436)
Q Consensus       263 ~~~~~  267 (436)
                      ||.+.
T Consensus       219 WI~~~  223 (224)
T 1pq7_A          219 FIDTY  223 (224)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            99764


No 62 
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=100.00  E-value=1.9e-45  Score=330.09  Aligned_cols=215  Identities=28%  Similarity=0.559  Sum_probs=181.6

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCcc-CCceE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEE-EKSEV  105 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~-~~~~~  105 (436)
                      |+||++|.+++|||+|+|+..+      .++|+||||+++||||||||+.+         .+.|.+|....... ....+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGsLIs~~~VLTAAHC~~~---------~~~v~~g~~~~~~~~~~~~~   65 (223)
T 2bdg_A            1 IINGEDCSPHSQPWQAALVMEN------ELFCSGVLVHPQWVLSAAHCFQN---------SYTIGLGLHSLEADQEPGSQ   65 (223)
T ss_dssp             CBTCEECCTTSSTTEEEEECSS------CEEEEEEEEETTEEEECGGGCCS---------SEEEEESCSBSCGGGCTTCE
T ss_pred             CCCCEECCCCCCCcEEEEeeCC------CEEEEEEEecCCEEEEhHHhCCC---------CeEEEEeeeecCCCCCCCcE
Confidence            6899999999999999998632      68999999999999999999853         36789998776532 33457


Q ss_pred             EEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        106 RIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       106 ~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      .+.+.++++||+|+  ...||||||||++|+. ++..++|||||...   ...+..++++|||.+... ..+..|+++.+
T Consensus        66 ~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~-~~~~v~pi~l~~~~---~~~~~~~~v~GwG~~~~~-~~~~~L~~~~~  140 (223)
T 2bdg_A           66 MVEASLSVRHPEYNRPLLANDLMLIKLDESVS-ESDTIRSISIASQC---PTAGNSCLVSGWGLLANG-RMPTVLQCVNV  140 (223)
T ss_dssp             EEEEEEEEECTTTTSSTTCSCCEEEEESSCCC-CCSSCCCCCBCSSC---CCTTCEEEEEESCCCTTS-CCCSBCEEEEE
T ss_pred             EEEEEEEEeCCCCCCCCCcCcEEEEEECCccc-CCCceecccCCCCC---CCCCCEEEEEeCcccCCC-CCCCcceEEEE
Confidence            78999999999997  4689999999999999 77889999999742   346889999999988754 55678999999


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---Ccccccccce
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---GIRYSHRQPR  260 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~~  260 (436)
                      ++++.+.|+..+...  ..+.||||+...+..+.|.|||||||+++.     +|+||+|||...|+.   +.+|++|..|
T Consensus       141 ~~~~~~~C~~~~~~~--~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~  213 (223)
T 2bdg_A          141 SVVSEEVCSKLYDPL--YHPSMFCAGGGQDQKDSCNGDSGGPLICNG-----YLQGLVSFGKAPCGQVGVPGVYTNLCKF  213 (223)
T ss_dssp             EBCCHHHHHHHSTTT--CCTTEEEECCSTTCCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEECGGGT
T ss_pred             EEeCHHHhhhhhCCC--CCCCeEeccCCCCCCCcCCCCCCchheEcc-----EEEEEEEecCCCCCCCCCCcEEEEHHHh
Confidence            999999999987543  456999998766668999999999999852     699999999855753   6799999999


Q ss_pred             ecCCcccc
Q psy16044        261 LINGKESI  268 (436)
Q Consensus       261 ~~~~~~~~  268 (436)
                      ..||.+.+
T Consensus       214 ~~WI~~~i  221 (223)
T 2bdg_A          214 TEWIEKTV  221 (223)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998654


No 63 
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=100.00  E-value=1.7e-45  Score=331.51  Aligned_cols=221  Identities=28%  Similarity=0.415  Sum_probs=186.9

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+......  ..++|+||||+++||||||||+.         ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~--~~~~CgGtLI~~~~VLTAAhC~~---------~~~~v~~G~~~~~~~~~~~~~   69 (226)
T 4ag1_A            1 IIGGTECKPHSRPYMAYLEIVTSNG--PSKFCGGFLIRRNFVLTAAHCAG---------RSITVTLGAHNITEEEDTWQK   69 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECSSS--SCEEEEEEEEETTEEEECGGGCC---------SEEEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCCCcEEEEEEEcCCC--cccEEEEEEEeCCEEEECcccCC---------CCeEEEeCCcccCCCCCcceE
Confidence            7899999999999999998764322  26889999999999999999983         357899999888776666788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|.++++||+|+  ...||||||||++|+. ++..++|+|||... .....+..++++|||.+......+..|++..++
T Consensus        70 ~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~pi~l~~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  147 (226)
T 4ag1_A           70 LEVIKQFRHPKYNTSTLHHDIMLLKLKEKAS-LTLAVGTLPFPSQF-NFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLR  147 (226)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CCSSSCCCCCC------CCTTCEEEEEESSBSSTTSCBCSBCEEEEEE
T ss_pred             EEEEEEEeCCCCCCCCCcCcEEEEEECCCCc-cCCceeccccCCcc-cCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEE
Confidence            9999999999997  4679999999999999 78889999999853 334578999999999988766677889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                      +++.+.|.....   ...+.+||++...+..+.|.|||||||++..     +|+||+|||.+|+..+.+|++|..|..||
T Consensus       148 ~~~~~~C~~~~~---~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~p~vyt~v~~~~~WI  219 (226)
T 4ag1_A          148 LMDPQACSHFRD---FDHNLQLCVGNPRKTKSAFKGDSGGPLLCAG-----VAQGIVSYGRSDAKPPAVFTRISHYRPWI  219 (226)
T ss_dssp             EECGGGGTTSTT---CCTTTEEEESCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECBTTCCSCEEEEEHHHHHHHH
T ss_pred             EcChHHcccccC---cCccceEeeccCCCCCcCccCCCCCceEEcC-----EEEEEEEECCCCCCCCCEEEEhHHHHHHH
Confidence            999999983321   2356899999877778999999999999842     79999999998666789999999999999


Q ss_pred             cccc
Q psy16044        265 KESI  268 (436)
Q Consensus       265 ~~~~  268 (436)
                      .+.+
T Consensus       220 ~~~i  223 (226)
T 4ag1_A          220 NQIL  223 (226)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8765


No 64 
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=100.00  E-value=1.2e-45  Score=331.22  Aligned_cols=217  Identities=29%  Similarity=0.501  Sum_probs=182.0

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+..+      .++|+||||+++||||||||+...    .....+.|++|......   ..+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~~----~~~~~~~v~~G~~~~~~---~~~~   67 (222)
T 1eq9_A            1 IVGGKDAPVGKYPYQVSLRLSG------SHRCGASILDNNNVLTAAHCVDGL----SNLNRLKVHVGTNYLSE---SGDV   67 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEETT------EEEEEEEECSSSEEEECHHHHTTC----SCGGGEEEEESCSBTTS---CCEE
T ss_pred             CCCCEECCCCCcceEEEEEeCC------CeEEEEEEeeCCEEEEhhhcCCCC----CCCceEEEEECceecCC---CCeE
Confidence            6899999999999999998642      589999999999999999999653    12466899999876632   3477


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||+|++|+. ++..++|||||.....  ..+..++++|||.+...+..+..|+++.++
T Consensus        68 ~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picL~~~~~~--~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  144 (222)
T 1eq9_A           68 YDVEDAVVNKNYDDFLLRNDVALVHLTNPIK-FNDLVQPIKLSTNDED--LESNPCTLTGWGSTRLGGNTPNALQEIELI  144 (222)
T ss_dssp             EEEEEEEECTTCBTTTTBCCCEEEEESSCCC-CBTTBCCCEECSCCTT--CTTSEEEEEECCCSSTTCCCCSBCEEEEEE
T ss_pred             EEEEEEEECCCCCCCCCCCCEEEEEECCccc-cCCceEccCCCCCCcC--CCCCEEEEEcccccCCCCcccchheEeEEE
Confidence            8999999999997  4679999999999999 7788999999985432  467889999999988766677889999999


Q ss_pred             ccchhhhh-hhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC-CCCcccccccceec
Q psy16044        185 LHNISVCR-DKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC-GVGIRYSHRQPRLI  262 (436)
Q Consensus       185 ~~~~~~C~-~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C-~~~~~y~~v~~~~~  262 (436)
                      +++.+.|+ ..+.    ..+.|+|++.. ...++|.|||||||+++   +  +|+||+|||.+|. +.+.+|++|.+|..
T Consensus       145 ~~~~~~C~~~~~~----~~~~~~Ca~~~-~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~C~~~~p~vyt~V~~~~~  214 (222)
T 1eq9_A          145 VHPQKQCERDQWR----VIDSHICTLTK-RGEGACHGDSGGPLVAN---G--AQIGIVSFGSPCALGEPDVYTRVSSFVS  214 (222)
T ss_dssp             EECHHHHHHHSSS----CCTTEEEECCC-TTCBCCTTCTTCEEEET---T--EEEEEEEECSTTTSSSCEEEEEGGGGHH
T ss_pred             EeCHHHhCcccCC----CCccEEeecCC-CCCeeeeCCccceEEEC---C--EEEEEEEECCCcCCCCCCEEEEHHHHHH
Confidence            99999998 4442    45789999874 34789999999999984   2  7999999998733 35789999999999


Q ss_pred             CCccccC
Q psy16044        263 NGKESIR  269 (436)
Q Consensus       263 ~~~~~~~  269 (436)
                      ||.+.+.
T Consensus       215 WI~~~~~  221 (222)
T 1eq9_A          215 WINANLK  221 (222)
T ss_dssp             HHHHTSC
T ss_pred             HHHHHhh
Confidence            9987664


No 65 
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=100.00  E-value=1.4e-46  Score=367.03  Aligned_cols=246  Identities=24%  Similarity=0.418  Sum_probs=188.0

Q ss_pred             CCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEE
Q psy16044         12 RDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAV   91 (436)
Q Consensus        12 ~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~   91 (436)
                      ..||++........||+||+.|..++|||+|+|..        .++|+||||+++||||||||+............+.|+
T Consensus       143 ~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~--------~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~  214 (399)
T 1gpz_A          143 PVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNI--------HGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVF  214 (399)
T ss_dssp             ECCSCCSSCCCSSCCCCSCEECCTTSSTTEEEEES--------SSEEEEEEETTTEEEECGGGTSCTTC-----CCCEEE
T ss_pred             CCCCCcCCcccCCCEEECCEECCCCCCCCEEEECC--------CCCeEEEEeCCCEEEeChhcccccccccCCcceEEEE
Confidence            47997655445568999999999999999999853        3469999999999999999997543222233567899


Q ss_pred             eccccCCccCCceEEEeeeEEEeCCCCC-----CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecC
Q psy16044         92 LGDWDRTEEEKSEVRIPVERIRVHEEFH-----NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWG  166 (436)
Q Consensus        92 ~g~~~~~~~~~~~~~~~v~~i~~hp~y~-----~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG  166 (436)
                      +|..+..... ..+.+.|+++++||+|+     ...||||||||++|+. ++.+|+|||||.... ....+..++++|||
T Consensus       215 ~G~~~~~~~~-~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG  291 (399)
T 1gpz_A          215 LGHTNVEELM-KLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVT-LGPNLLPICLPDNDT-FYDLGLMGYVSGFG  291 (399)
T ss_dssp             ESCSBHHHHH-HTCCCCEEEEEECSSCCSSSSSCCTTCCEEEEESSCCC-CBTTBCCCBCCCSGG-GGCTTCEEEEEECC
T ss_pred             eccccccccc-cccccceEEEEECCCCCcCCCCCCCCcEEEEEECCcCc-CCCceeeeecCCCcc-ccCCCCEEEEEccC
Confidence            9987643221 12346799999999996     2578999999999999 788899999998532 23467889999999


Q ss_pred             ccCCCCCccccceeeeeeccchhhhhhhcCCC---cCCcCCeEEeccCCCCCCCccCCCCCeeeeEe-cCCcEEEEEEEe
Q psy16044        167 RVKPKGDLVSKLRQIRVPLHNISVCRDKYGDS---VELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITS  242 (436)
Q Consensus       167 ~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~---~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~-~~~~~~l~GI~S  242 (436)
                      .+..  ..+..|+++.+++++.+.|+..+...   ...+++||||+...+..++|+|||||||++.. .+++|+|+||+|
T Consensus       292 ~~~~--~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS  369 (399)
T 1gpz_A          292 VMEE--KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVS  369 (399)
T ss_dssp             -------CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEEC
T ss_pred             CCCC--ccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEE
Confidence            8764  34678999999999999999876431   23467999998766568999999999999875 367899999999


Q ss_pred             EcCCCCCCCcccccccceecCCccccCC
Q psy16044        243 FGSGYCGVGIRYSHRQPRLINGKESIRG  270 (436)
Q Consensus       243 ~g~~~C~~~~~y~~v~~~~~~~~~~~~~  270 (436)
                      ||.+|...+.+|++|..|+.||.+.+..
T Consensus       370 ~g~~C~~~~~vyt~V~~y~~WI~~~~~~  397 (399)
T 1gpz_A          370 WGIGCSRGYGFYTKVLNYVDWIKKEMEE  397 (399)
T ss_dssp             CCTTTTTTEEEEEEGGGGHHHHHHHTC-
T ss_pred             eCCCcCCCCeEEEEhHHhHHHHHHHhcc
Confidence            9998444568999999999999877653


No 66 
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=100.00  E-value=3.4e-45  Score=329.42  Aligned_cols=222  Identities=27%  Similarity=0.481  Sum_probs=186.1

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+....  +. .++|+||||+++||||||||+..         .+.|++|.++........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~--~~-~~~CgGsLI~~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   68 (227)
T 1euf_A            1 IIGGHEAKPHSRPYMAFLLFKTS--GK-SHICGGFLVREDFVLTAAHCLGS---------SINVTLGAHNIMERERTQQV   68 (227)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESS--SS-EEEEEEEEEETTEEEECGGGCCE---------EEEEEESCSBTTSCCTTCEE
T ss_pred             CCCCeECCCCCcCCEEEEEEeCC--CC-ceEEEEEEeeCCEEEECHHHCCC---------CcEEEEcccccCCCCCccEE
Confidence            78999999999999999987532  11 58999999999999999999853         47899999887665556788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||.... ....+..++++|||.+......+..|+++.++
T Consensus        69 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  146 (227)
T 1euf_A           69 IPVRRPIPHPDYNDETLANDIMLLKLTRKAD-ITDKVSPINLPRSLA-EVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLE  146 (227)
T ss_dssp             EEEEEEEECTTCCTTTCTTCCEEEEESSCCC-CCSSCCCCCCCCTTC-CCCTTCEEEEEESCBSSTTCCBCSBCEEEEEE
T ss_pred             EEEEEEEeCCCCCCCCCcCceEEEEECCcCc-CCCceeccCCCCccc-cCCCCCEEEEEEEccCCCCCCCchhheEeEec
Confidence            9999999999997  4689999999999999 778899999998532 34578999999999988666667889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                      +++.+.|...+...  ..+.||||+...+....|.|||||||++++     +|+||+|||-+....+.+|++|..|..||
T Consensus       147 i~~~~~C~~~~~~~--~~~~~~Ca~~~~~~~~~~~GDsGgPL~~~~-----~l~Gi~S~gc~~~~~p~vyt~V~~y~~WI  219 (227)
T 1euf_A          147 VQSEEKCIARFKNY--IPFTQICAGDPSKRKNSFSGDSGGPLVCNG-----VAQGIVSYGRNDGTTPDVYTRISSFLSWI  219 (227)
T ss_dssp             BCCTHHHHTTCTTC--CTTTEEEESCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECCTTCCSCEEEEEGGGTHHHH
T ss_pred             cccHHHhhHhhcCc--CCCcEEEccCCCCCCcccccCCCCceEECC-----EEEEEEEEeCCCCCCCeEEEEHHHhHHHH
Confidence            99999999877543  456899998766545678999999999842     79999999922223478999999999999


Q ss_pred             ccccC
Q psy16044        265 KESIR  269 (436)
Q Consensus       265 ~~~~~  269 (436)
                      .+.+.
T Consensus       220 ~~~~~  224 (227)
T 1euf_A          220 HSTMR  224 (227)
T ss_dssp             HHHTC
T ss_pred             HHHHh
Confidence            88764


No 67 
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=100.00  E-value=3e-45  Score=332.75  Aligned_cols=224  Identities=27%  Similarity=0.395  Sum_probs=186.0

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCcc--CCce
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEE--EKSE  104 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~--~~~~  104 (436)
                      |+||++|.. +|||+|+|+..+      .++|+||||+++||||||||+...     ....+.|++|..+....  ....
T Consensus         1 IvgG~~a~~-~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~~-----~~~~~~v~~G~~~~~~~~~~~~~   68 (240)
T 1si5_H            1 VVNGIPTRT-NIGWMVSLRYRN------KHICGGSLIKESWVLTARQCFPSR-----DLKDYEAWLGIHDVHGRGDEKCK   68 (240)
T ss_dssp             CBSCEECSS-CCTTEEEEEESS------SEEEEEEEEETTEEEEEGGGCSSS-----CGGGEEEEESCSBSSCSTTTTTC
T ss_pred             CCCCeeCCC-CCCeEEEEEeCC------CeEEEEEEeeCCEEEEhHHhcCCC-----CCccEEEEEeeeecCCCCCCCcc
Confidence            689999999 999999998752      689999999999999999999763     24678999999877654  3446


Q ss_pred             EEEeeeEEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        105 VRIPVERIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       105 ~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.+.|.+++.||.    .+|||||+|++|+. ++..++|||||... .....+..++++|||.+.... .+..|++..++
T Consensus        69 ~~~~v~~~~~~p~----~~DiALl~L~~~v~-~~~~v~picLp~~~-~~~~~~~~~~v~GwG~~~~~~-~~~~L~~~~~~  141 (240)
T 1si5_H           69 QVLNVSQLVYGPE----GSDLVLMKLARPAV-LDDFVSTIDLPNYG-STIPEKTSCSVYGWGYTGLIN-YDGLLRVAHLY  141 (240)
T ss_dssp             EEEEEEEEEECSS----TTCEEEEEESSCCC-CSSSCCCCBCCCTT-CCCCTTCEEEEEESSCCCCSS-CCCBCEEEEEE
T ss_pred             eEEEEEEEEcCCC----CCcEEEEEECCccc-cCCceeccCcCCcC-CCCCCCCEEEEEEeCCCCCCC-CCCeeEEEEEe
Confidence            7889999999987    69999999999999 77889999999853 334578899999999887543 46789999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCcccccccceec
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIRYSHRQPRLI  262 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~y~~v~~~~~  262 (436)
                      +++.+.|...+.......+.|||++...+..++|.|||||||++.. +++|+|+||+|||.+|+  +.+.+|++|..|..
T Consensus       142 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~  220 (240)
T 1si5_H          142 IMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQ-HKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAK  220 (240)
T ss_dssp             EECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTTCEEEEEC-SSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHH
T ss_pred             ecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCCCcEEEEE-CCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHH
Confidence            9999999987754433667999999877668999999999999984 78999999999998743  34689999999999


Q ss_pred             CCccccCC
Q psy16044        263 NGKESIRG  270 (436)
Q Consensus       263 ~~~~~~~~  270 (436)
                      ||.+.+..
T Consensus       221 WI~~~i~~  228 (240)
T 1si5_H          221 WIHKIILT  228 (240)
T ss_dssp             HHHHHHSS
T ss_pred             HHHHHHhc
Confidence            99887764


No 68 
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=100.00  E-value=1.3e-45  Score=331.88  Aligned_cols=221  Identities=29%  Similarity=0.461  Sum_probs=189.6

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+......  ..++|+||||+++||||||||+.         ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~--~~~~CgGtLI~~~~VLTAAhC~~---------~~~~v~~g~~~~~~~~~~~~~   69 (224)
T 3rp2_A            1 IIGGVESIPHSRPYMAHLDIVTEKG--LRVICGGFLISRQFVLTAAHCKG---------REITVILGAHDVRKRESTQQK   69 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTS--CEEEEEEEESSSSEEEECGGGCC---------SEEEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCC--cEEEEEeEEeeCCEEEEchhcCC---------CCcEEEEeccccCcCCCCcEE
Confidence            7899999999999999998765322  26889999999999999999973         357899999887776667788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|+++++||+|+  +..||||||||++|+. ++..++|+|||... .....+..++++|||.+...+..+..|++..++
T Consensus        70 ~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~pi~l~~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~  147 (224)
T 3rp2_A           70 IKVEKQIIHESYNSVPNLHDIMLLKLEKKVE-LTPAVNVVPLPSPS-DFIHPGAMCWAAGWGKTGVRDPTSYTLREVELR  147 (224)
T ss_dssp             EEEEEEEECTTCCSSSCCSCCEEEEESSCCC-CBTTBCCCCCCCTT-CCCCTTCEEEEEESSEEETTEEECSBCEEEEEE
T ss_pred             EEEEEEEECCCccCCCCCccEEEEEcCCCcc-cCCcccceecCCcc-cCCCCCCEEEEEeCCCCCCCCCCCceeeEeeee
Confidence            9999999999997  4679999999999999 78889999999864 334578999999999987666667789999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLING  264 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~  264 (436)
                      +++.+.|....   ....+.++|++...+..+.|.|||||||++..     +|+||+|||.+|+..+.+|++|..|..||
T Consensus       148 ~~~~~~C~~~~---~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~p~vyt~v~~y~~WI  219 (224)
T 3rp2_A          148 IMDEKACVDYR---YYEYKFQVCVGSPTTLRAAFMGDSGGPLLCAG-----VAHGIVSYGHPDAKPPAIFTRVSTYVPWI  219 (224)
T ss_dssp             EECGGGTTTTT---CCCTTTEEEECCTTSCCBCCTTTTTCEEEETT-----EEEEEEEECCTTCCSCEEEEEHHHHHHHH
T ss_pred             ecChHHhcccc---ccCcCCEEEecCCCCCCeeccCCCCCeEEEcc-----eeeEEEEECCCCCCCCcEEEEHHHhHHHH
Confidence            99999998722   22356899999877778999999999999843     79999999998777789999999999999


Q ss_pred             cccc
Q psy16044        265 KESI  268 (436)
Q Consensus       265 ~~~~  268 (436)
                      .+.+
T Consensus       220 ~~~i  223 (224)
T 3rp2_A          220 NAVI  223 (224)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8754


No 69 
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=100.00  E-value=1.4e-45  Score=331.54  Aligned_cols=215  Identities=32%  Similarity=0.597  Sum_probs=180.3

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.+|.+++|||+|+|+...      .++|+||||+++||||||||+.         ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGsLI~~~~VLTAAHC~~---------~~~~v~~G~~~~~~~~~~~~~   65 (225)
T 1npm_A            1 ILEGRECIPHSQPWQAALFQGE------RLICGGVLVGDRWVLTAAHCKK---------QKYSVRLGDHSLQSRDQPEQE   65 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECGGGCC---------SSCEEEESCSBTTC--CCCEE
T ss_pred             CCCCEECCCCCcCcEEEEeeCC------ceEEEEEEECCCEEEEhHHcCC---------CCceEEEeeeEcCCCCCCcEE
Confidence            6899999999999999997532      6899999999999999999984         236899999887665556688


Q ss_pred             EeeeEEEeCCCC-C----CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccC-CCCCcccccee
Q psy16044        107 IPVERIRVHEEF-H----NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVK-PKGDLVSKLRQ  180 (436)
Q Consensus       107 ~~v~~i~~hp~y-~----~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~-~~~~~~~~l~~  180 (436)
                      +.|.++++||+| +    ...||||||||++|+. ++..++|||||...   ...+..++++|||.+. ..+..+..|++
T Consensus        66 ~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~-~~~~v~pi~L~~~~---~~~~~~~~v~GwG~~~~~~~~~~~~L~~  141 (225)
T 1npm_A           66 IQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSAN-LGDKVKPVQLANLC---PKVGQKCIISGWGTVTSPQENFPNTLNC  141 (225)
T ss_dssp             ECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCC-CSSSSCCCEECSSC---CCTTCEEEEEESSCSSSSSCCCCSBCEE
T ss_pred             EEEEEEEECCCCCCCCccCccccEEEEeeCCccc-CCCceeceECCCCC---CCCCCEEEEEeCCcccCCCCCCCccceE
Confidence            999999999999 3    3579999999999999 77889999999753   3468899999999874 34556778999


Q ss_pred             eeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC---CCcccccc
Q psy16044        181 IRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG---VGIRYSHR  257 (436)
Q Consensus       181 ~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~---~~~~y~~v  257 (436)
                      +.+++++.+.|+..+..  ...+.||||+... ..+.|.|||||||+++   +  +|+||+|||...|+   .+.+|++|
T Consensus       142 ~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~-~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~C~~~~~p~vyt~V  213 (225)
T 1npm_A          142 AEVKIYSQNKCERAYPG--KITEGMVCAGSSN-GADTCQGDSGGPLVCD---G--MLQGITSWGSDPCGKPEKPGVYTKI  213 (225)
T ss_dssp             EEEEECCHHHHHHHSTT--TCCTTEEEEECTT-CCBCCTTCTTCEEEET---T--EEEEEEEECCSSSCBTTBCEEEEEH
T ss_pred             eEEeeecHHHhhHHhCC--CCCCCEEeecCCC-CCeecCCCCCchheEC---C--EEEEEEEeCCCCCCCCCCCeEEEEH
Confidence            99999999999998864  3457999998765 4799999999999984   2  59999999955565   46799999


Q ss_pred             cceecCCcccc
Q psy16044        258 QPRLINGKESI  268 (436)
Q Consensus       258 ~~~~~~~~~~~  268 (436)
                      ..|..||.+.+
T Consensus       214 ~~y~~WI~~~~  224 (225)
T 1npm_A          214 CRYTTWIKKTM  224 (225)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999998654


No 70 
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=100.00  E-value=1.2e-45  Score=360.73  Aligned_cols=241  Identities=25%  Similarity=0.459  Sum_probs=197.4

Q ss_pred             CCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEE
Q psy16044         12 RDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAV   91 (436)
Q Consensus        12 ~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~   91 (436)
                      ..||....  ....||+||++|..++|||+|+|+.        .++|+||||+++||||||||+.....   ....+.|+
T Consensus       149 ~~CG~~~~--~~~~rIvgG~~a~~~~~Pw~v~l~~--------~~~CgGsLIs~~~VLTAAHC~~~~~~---~~~~~~V~  215 (403)
T 1zjk_A          149 PVCGLSAR--TTGGQIYGGQKAKPGDFPWQVLILG--------GTTAAGALLYDNWVLTAAHAVYEQKH---DASALDIR  215 (403)
T ss_dssp             ECCCCCSS--CCSCCCSSCEECCTTSSTTEEEEEE--------SCCEEEEEETTTEEEECHHHHGGGTT---CSTTEEEE
T ss_pred             CCCCCCCC--CCCccccCCcCCCCCCcCCEeEecc--------CCceEEEEecCCEEEEcHHhCCCCCC---CcceEEEE
Confidence            47996543  2467999999999999999999975        35799999999999999999965321   24668899


Q ss_pred             eccccCCccCCceEEEeeeEEEeCCCCCC---CCCceeEEEeCCCCCCCCCceeeeeecCCCCC-CCCCCCcEEEEecCc
Q psy16044         92 LGDWDRTEEEKSEVRIPVERIRVHEEFHN---YHHDIALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGR  167 (436)
Q Consensus        92 ~g~~~~~~~~~~~~~~~v~~i~~hp~y~~---~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~-~~~~~~~~~~~GwG~  167 (436)
                      +|.++..  ....+.+.|+++++||+|+.   ..||||||||++|+. ++.+|+|||||..... .+..+..++++|||.
T Consensus       216 ~G~~~~~--~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~  292 (403)
T 1zjk_A          216 MGTLKRL--SPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVV-INSNITPICLPRKEAESFMRTDDIGTASGWGL  292 (403)
T ss_dssp             ESCSBTT--CSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCC-CBTTBCCCBCCCGGGGGGSSTTCEEEEEESCT
T ss_pred             ccccccC--CCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCc-CCCceecccCCCcccccccCCCCeEEEEcCCc
Confidence            9987532  23457789999999999973   579999999999999 7888999999975322 145688999999998


Q ss_pred             cCCCCCccccceeeeeeccchhhhhhhcCCCc----CCcCCeEEeccCCCCCCCccCCCCCeeeeEe-cCCcEEEEEEEe
Q psy16044        168 VKPKGDLVSKLRQIRVPLHNISVCRDKYGDSV----ELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITS  242 (436)
Q Consensus       168 ~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~----~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~-~~~~~~l~GI~S  242 (436)
                      +... ..+..|+++.+++++.+.|+..+....    ..+++||||+...+..++|.|||||||++.. .+++|+|+||+|
T Consensus       293 ~~~~-~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS  371 (403)
T 1zjk_A          293 TQRG-FLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVS  371 (403)
T ss_dssp             TSSS-CCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEE
T ss_pred             CCCC-ccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEE
Confidence            8754 557789999999999999998875421    4677999999877678999999999999975 467999999999


Q ss_pred             EcCCCCC---CCcccccccceecCCccccC
Q psy16044        243 FGSGYCG---VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       243 ~g~~~C~---~~~~y~~v~~~~~~~~~~~~  269 (436)
                      ||...|+   .+.+|++|..|..||.+.+.
T Consensus       372 ~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~  401 (403)
T 1zjk_A          372 WGSMNCGEAGQYGVYTKVINYIPWIENIIS  401 (403)
T ss_dssp             EECSCC--CCCCEEEEEGGGGHHHHHHHHT
T ss_pred             ECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            9944475   36799999999999987654


No 71 
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=100.00  E-value=1.6e-45  Score=335.29  Aligned_cols=227  Identities=26%  Similarity=0.471  Sum_probs=189.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+  .      .++|+||||+++||||||||+....   .....+.|++|........  .+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~--~------~~~CgGtLI~~~~VLTAAhC~~~~~---~~~~~~~v~~g~~~~~~~~--~~~   67 (242)
T 3tvj_B            1 IYGGQKAKPGDFPWQVLIL--G------GTTAAGALLYDNWVLTAAHAVYEQK---HDASALDIRMGTLKRLSPH--YTQ   67 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEE--S------SEEEEEEEETTTEEEECHHHHSTTT---TCSSCCEEEESCSBTTCSC--CEE
T ss_pred             CcCCeeCCCCCCCCEEEEe--c------CCcEEEEEecCCEEEECHHHCCCCC---CCcceEEEEeccccccCcc--cce
Confidence            7899999999999999997  1      6889999999999999999996531   2346688999987765443  267


Q ss_pred             EeeeEEEeCCCCCC---CCCceeEEEeCCCCCCCCCceeeeeecCCCCC-CCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        107 IPVERIRVHEEFHN---YHHDIALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~~---~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~-~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.++++++||+|+.   ..||||||||++|+. ++.+++|||||..... ....+..++++|||.+.. +..+..|+++.
T Consensus        68 ~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~-~~~~~~l~~~~  145 (242)
T 3tvj_B           68 AWSEAVFIHEGYTHDAGFDNDIALIKLNNKVV-INSNITPICLPRKEAESFMRTDDIGTASGWGLTQR-GFLARNLMYVD  145 (242)
T ss_dssp             EEEEEEEECTTCCTTSCSTTCCEEEEESSCCC-CBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTT-SSCCSBCEEEE
T ss_pred             eeEEEEEeCCCCCCCCCCcCcEEEEEECCccc-cCCCEecCCcCCCcccccccCCCEEEEEEeCCCCC-CCcCccceEEe
Confidence            78999999999974   579999999999999 7888999999986421 355788999999998874 56677899999


Q ss_pred             eeccchhhhhhhcCCC----cCCcCCeEEeccCCCCCCCccCCCCCeeeeEe-cCCcEEEEEEEeEcCCCCCC---Cccc
Q psy16044        183 VPLHNISVCRDKYGDS----VELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGYCGV---GIRY  254 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~----~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~-~~~~~~l~GI~S~g~~~C~~---~~~y  254 (436)
                      +.+++.+.|+..+...    ....+.|||++...+..+.|.|||||||++.. .+++|+|+||+|||...|+.   +.+|
T Consensus       146 ~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vy  225 (242)
T 3tvj_B          146 IPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVY  225 (242)
T ss_dssp             EEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEE
T ss_pred             eeEEcHHHHHHhhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEE
Confidence            9999999999887542    23567999999877778999999999999975 57899999999999544654   5799


Q ss_pred             ccccceecCCcccc
Q psy16044        255 SHRQPRLINGKESI  268 (436)
Q Consensus       255 ~~v~~~~~~~~~~~  268 (436)
                      ++|.+|..||.+.+
T Consensus       226 t~V~~y~~WI~~~i  239 (242)
T 3tvj_B          226 TKVINYIPWIENII  239 (242)
T ss_dssp             EEGGGGHHHHHHHH
T ss_pred             EEHHHHHHHHHHHH
Confidence            99999999998765


No 72 
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=100.00  E-value=4.2e-46  Score=338.48  Aligned_cols=227  Identities=35%  Similarity=0.611  Sum_probs=179.8

Q ss_pred             CCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCce--EE
Q psy16044         29 NGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSE--VR  106 (436)
Q Consensus        29 ~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~--~~  106 (436)
                      ||++|.+++|||+|+|+....  +...++|+||||+++||||||||+..       ...+.|++|..+........  +.
T Consensus         1 gG~~a~~~~~Pw~v~l~~~~~--~~~~~~CgGtLIs~~~VLTAAhC~~~-------~~~~~v~~G~~~~~~~~~~~~~~~   71 (240)
T 1fon_A            1 NGEDAVPYSWSWQVSLQYEKD--GAFHHTCGGSLIAPDWVVTAGHCIST-------SRTYQVVLGEYDRSVLEGSEQVIP   71 (240)
T ss_dssp             --------CEEEEEEEEEEET--TEEEEEECCEEEETTEEEECGGGCCT-------TSCEEEEEEEEETTEEEEEEEEEE
T ss_pred             CCccCCcCCcccEEEEEEecC--CcEeeEEEEEEeeCCEEEECHHHCCC-------CCceEEEeeeeeccccCCCceeEe
Confidence            689999999999999987431  11258999999999999999999865       25678999988776543333  67


Q ss_pred             EeeeEEEeCCCCCC--CC--CceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeee
Q psy16044        107 IPVERIRVHEEFHN--YH--HDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~~--~~--~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~  182 (436)
                      +.|+++++||+|+.  ..  ||||||||++|+. ++..++|||||.... .+..+..++++|||.+...+..+..|+++.
T Consensus        72 ~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~  149 (240)
T 1fon_A           72 INAGDLFVHPLWNSNCVACGNDIALVKLSRSAQ-LGDKVQLANLPPAGD-ILPNEAPCYISGWGRLYTGGPLPDKLQQAL  149 (240)
T ss_dssp             ECTTSEEECTTCCTTCGGGCCCCEEEECSSCCC-CTTSCCCCBCCCTTC-CCCTTCCCEEEECTTCCCSSSCCSBCEEEE
T ss_pred             eeeeEEEECCCCcCCCccCCCCEEEEEecCccc-cCCcccccCCCCccc-CCCCCCeEEEEEEeEcCCCCCCChhheEEE
Confidence            88999999999983  45  9999999999999 778899999998643 345688999999999887666778899999


Q ss_pred             eeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcC-CCCC---CCccccccc
Q psy16044        183 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GYCG---VGIRYSHRQ  258 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~-~~C~---~~~~y~~v~  258 (436)
                      +++++.+.|+..+.......+.|||++.. + .+.|.|||||||++...+++|+|+||+|||. ..|+   .+.+|++|.
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~-~-~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~  227 (240)
T 1fon_A          150 LPTVDYEHCSQWDWWGITVKKTMVCAGGD-T-RSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVS  227 (240)
T ss_dssp             CCEECHHHHTSTTTTGGGCCTTEEEECCS-S-SCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGG
T ss_pred             EeeeCHHHhccceecCCccccceEeecCC-C-CcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhH
Confidence            99999999987643223456799999853 3 7899999999999986588999999999997 2465   468999999


Q ss_pred             ceecCCcccc
Q psy16044        259 PRLINGKESI  268 (436)
Q Consensus       259 ~~~~~~~~~~  268 (436)
                      .|..||.+.+
T Consensus       228 ~~~~WI~~~~  237 (240)
T 1fon_A          228 AFIDWIDETI  237 (240)
T ss_dssp             GSHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998765


No 73 
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=100.00  E-value=1.9e-45  Score=330.77  Aligned_cols=217  Identities=31%  Similarity=0.585  Sum_probs=184.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+..       ...+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLI~~~~VLTAAHC~~~-------~~~~~v~~G~~~~~~~~~~~~~   67 (226)
T 1azz_A            1 IVGGVEAVPNSWPHQAALFIDD------MYFCGGSLISPEWILTAAHCMDG-------AGFVDVVLGAHNIREDEATQVT   67 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------TEEEEEEEEETTEEEECHHHHTT-------CSCEEEEESCSBSSSCCTTCEE
T ss_pred             CCCCEECCCCCcCCEEEEEECC------cEEEEEEEecCCEEEEhHHhcCC-------CCceEEEEcceEcCCCCCccEE
Confidence            7899999999999999998732      68999999999999999999864       3567899999887765555688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCC-Cccccceeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRV  183 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~-~~~~~l~~~~~  183 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++..++|||||..+.   ..+..++++|||.+...+ ..+..|++..+
T Consensus        68 ~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~-~~~~v~picL~~~~~---~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~  143 (226)
T 1azz_A           68 IQSTDFTVHENYNSFVISNDIAVIRLPVPVT-LTAAIATVGLPSTDV---GVGTVVTPTGWGLPSDSALGISDVLRQVDV  143 (226)
T ss_dssp             EEECCEEECTTCBTTTTBSCCEEEECSSCCC-CCSSSCCCBCCSSCC---CTTCEEEEEESSCSSTTCSSSCSBCEECCE
T ss_pred             EEEEEEEECCCCCCCCCCCceEEEEECCccc-cCCCcccccCCCCCC---CCCCEEEEEeCCccCCCCCCCCchhEEeeE
Confidence            8999999999997  4689999999999999 788899999998542   568899999999887543 45778999999


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC-CCC--CCcccccccce
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-YCG--VGIRYSHRQPR  260 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~-~C~--~~~~y~~v~~~  260 (436)
                      ++++.+.|+..+.   ...+.|||++.. +..++|.|||||||+++   +  +|+||+|||.. .|+  .+.+|++|..|
T Consensus       144 ~i~~~~~C~~~~~---~~~~~~~Ca~~~-~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~~C~~~~p~vyt~V~~~  214 (226)
T 1azz_A          144 PIMSNADCDAVYG---IVTDGNICIDST-GGKGTCNGDSGGPLNYN---G--LTYGITSFGAAAGCEAGYPDAFTRVTYF  214 (226)
T ss_dssp             EEECHHHHHHHHS---CCCTTEEEECCT-TTCBCCTTCTTCEEEET---T--EEEEEEEEEETTCTTSCCCEEEEESGGG
T ss_pred             EEEChhHhhhhhC---cCCCceEeecCC-CCCccCCCCCCcceEEC---C--EEEEEEEEECCCCCCCCCCCEEEEHHHH
Confidence            9999999999885   356799999864 44789999999999963   2  79999999974 475  35799999999


Q ss_pred             ecCCccccC
Q psy16044        261 LINGKESIR  269 (436)
Q Consensus       261 ~~~~~~~~~  269 (436)
                      ..||.+.+.
T Consensus       215 ~~WI~~~~~  223 (226)
T 1azz_A          215 LDWIQTQTG  223 (226)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999987654


No 74 
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=100.00  E-value=2.5e-44  Score=326.59  Aligned_cols=227  Identities=30%  Similarity=0.571  Sum_probs=181.1

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCc-eE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKS-EV  105 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~-~~  105 (436)
                      |+||++|..++|||+|+|+....    ..++|+||||+++||||||||+..         .+.|++|.......... ..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~----~~~~CgGtLI~~~~VLTAAHC~~~---------~~~v~~g~~~~~~~~~~~~~   67 (238)
T 4e7n_A            1 IIGGDECNINEHRFLVALYTSRS----RTLFCGGTLINQEWVLTAAHCDRK---------NFRIKLGMHSKKVPNEDEQT   67 (238)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTT----CCEEEEEEECSSSEEEECGGGCCS---------SCEEEESCSCSSSCCTTCEE
T ss_pred             CCCCeeCCCCCcCcEEEEEECCC----CCEEEEEEEecCCEEEEhHHcCCC---------CCeEEeceeeccccCCCcee
Confidence            78999999999999999976531    168999999999999999999743         35789998776644333 34


Q ss_pred             EEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        106 RIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       106 ~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      ...+..++.||.|+  ...||||||||++|+. ++..++|||||...   ...+..++++|||.+.              
T Consensus        68 ~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~-~~~~v~pi~l~~~~---~~~~~~~~v~GwG~~~--------------  129 (238)
T 4e7n_A           68 RVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVK-NSKHIAPFSLPSSP---PSVGSVCRIMGWGRIS--------------  129 (238)
T ss_dssp             ECEEEEECSSTTCCCCSSSCCCEEEEESSCCC-CBTTBCCCCCCSSC---CCTTCEEEEEESSCSS--------------
T ss_pred             EeeeeeEEcCCCCCCCCCCCcEEEEEeCCCcc-CCCceeeeeCCCCC---CCCCCEEEEEECCCCC--------------
Confidence            45567777899997  4689999999999998 67789999998742   2236667777776432              


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecC
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLIN  263 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~  263 (436)
                                                                                                      
T Consensus       130 --------------------------------------------------------------------------------  129 (238)
T 4e7n_A          130 --------------------------------------------------------------------------------  129 (238)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCC-CCccccceEEEE
Q psy16044        264 GKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK-GDLVSKLRQIRV  342 (436)
Q Consensus       264 ~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~-~~~~~~l~~~~~  342 (436)
                                                                                       .. ...+..|+++.+
T Consensus       130 -----------------------------------------------------------------~~~~~~~~~l~~~~~  144 (238)
T 4e7n_A          130 -----------------------------------------------------------------PTEGTYPDVPHCVNI  144 (238)
T ss_dssp             -----------------------------------------------------------------SSSCCCCSSCEEEEE
T ss_pred             -----------------------------------------------------------------CCCCCCCccceEeec
Confidence                                                                             11 122456889999


Q ss_pred             EeeCccccccccCCC-ccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcc
Q psy16044        343 PLHNISVCRDKYGDS-VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSF  420 (436)
Q Consensus       343 ~~~~~~~C~~~~~~~-~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~  420 (436)
                      ++++.++|+..+... ..++++|||++...+..+.|.|||||||+++.     .|+||+|||.. |+..+.|++||||+.
T Consensus       145 ~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~  219 (238)
T 4e7n_A          145 NLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLICNG-----QFQGIASWGDDPCAQPHKPAAYTKVFD  219 (238)
T ss_dssp             EEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEESGG
T ss_pred             cccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCCCCCcceEECC-----EEEEEEEEeCCCCCCCCCCeEEEEhHH
Confidence            999999999887531 24688999998767677999999999999953     39999999987 887788999999999


Q ss_pred             cHHHHHHHHhhhhh
Q psy16044        421 YLPWIRKQINIAVD  434 (436)
Q Consensus       421 ~~~WI~~~i~~~~~  434 (436)
                      |++||+++|+...+
T Consensus       220 ~~~WI~~~i~~~~~  233 (238)
T 4e7n_A          220 HLDWIENIIAGNTD  233 (238)
T ss_dssp             GHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHhcCCC
Confidence            99999999987654


No 75 
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=100.00  E-value=2e-45  Score=371.41  Aligned_cols=248  Identities=31%  Similarity=0.595  Sum_probs=145.3

Q ss_pred             ecCCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceE
Q psy16044         10 FARDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWT   89 (436)
Q Consensus        10 ~~~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~   89 (436)
                      ++..||++........||+||++|.+++|||+|+|+...      .++|+||||+++||||||||+...     ....+.
T Consensus       305 ~~~~CG~~~~~~~~~~rIvgG~~a~~g~~Pw~v~l~~~~------~~~CGGsLIs~~~VLTAAHCv~~~-----~~~~~~  373 (565)
T 2xrc_A          305 PKLSCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDAS------GITCGGIYIGGCWILTAAHCLRAS-----KTHRYQ  373 (565)
T ss_dssp             CCCCCCC--------------------CCTTBCEEEESS------SCCCCCEEEETTEEEECHHHHTTC-----SSCCEE
T ss_pred             CccccCCCCCcccCCCceECCEECCCCCCCcEEEEecCC------ceeeeEEEEeCCEEEEChhhcccC-----CCcceE
Confidence            345799766544567899999999999999999997532      578999999999999999999653     245688


Q ss_pred             EEeccccCCccC-CceEEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCC---CCceeeeeecCCCCCCCCCCCcEEEE
Q psy16044         90 AVLGDWDRTEEE-KSEVRIPVERIRVHEEFH--NYHHDIALLKLSRPTSAR---DKGVRAVCLTDADKRPVNPKQQCVAT  163 (436)
Q Consensus        90 v~~g~~~~~~~~-~~~~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~---~~~v~pi~l~~~~~~~~~~~~~~~~~  163 (436)
                      |++|.++..... ...+.+.|+++++||+|+  +..||||||||++|+.+.   ...++|||||... ....        
T Consensus       374 V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~-~~~~--------  444 (565)
T 2xrc_A          374 IWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSP-YLFQ--------  444 (565)
T ss_dssp             EEC-------------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCT-TSSC--------
T ss_pred             EEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccceeeeeccccccccccccceeeeecCCcc-cccC--------
Confidence            999987765433 345678899999999998  478999999999998731   1245666666431 1122        


Q ss_pred             ecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeE
Q psy16044        164 GWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSF  243 (436)
Q Consensus       164 GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~  243 (436)
                                                                                                      
T Consensus       445 --------------------------------------------------------------------------------  444 (565)
T 2xrc_A          445 --------------------------------------------------------------------------------  444 (565)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCcccccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEe
Q psy16044        244 GSGYCGVGIRYSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATG  323 (436)
Q Consensus       244 g~~~C~~~~~y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~G  323 (436)
                                                                                             .++.++++|
T Consensus       445 -----------------------------------------------------------------------~g~~~~v~G  453 (565)
T 2xrc_A          445 -----------------------------------------------------------------------PNDTCIVSG  453 (565)
T ss_dssp             -----------------------------------------------------------------------TTCEEEEEC
T ss_pred             -----------------------------------------------------------------------CCCEEEEEe
Confidence                                                                                   334455555


Q ss_pred             cCCCCCCCCccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec
Q psy16044        324 WGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG  403 (436)
Q Consensus       324 wg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~  403 (436)
                      ||.+... ..+..|+++.+++++  .|+..+... .....||||+...+..++|+|||||||++...+++|+|+||+|||
T Consensus       454 WG~t~~~-~~~~~L~~~~v~i~~--~C~~~~~~~-~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G  529 (565)
T 2xrc_A          454 WGREKDN-ERVFSLQWGEVKLIS--NCSKFYGNR-FYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWG  529 (565)
T ss_dssp             --------------CEEEEEECS--CTHHHHTTS-CCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC-
T ss_pred             CccCCCC-CccceeeEEeeeehH--HhHHhhccC-cCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeC
Confidence            5544322 234567888888887  398877542 234559999877666789999999999998667899999999999


Q ss_pred             CCCCCCCCCeEEEeCcccHHHHHHHHhhh
Q psy16044        404 SGCAKSGYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       404 ~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      .+|+..+.|+|||||++|++||+++|+..
T Consensus       530 ~~C~~~~~PgVYTrVs~y~~WI~~~i~~~  558 (565)
T 2xrc_A          530 ENCGKPEFPGVYTKVANYFDWISYHVGRP  558 (565)
T ss_dssp             -----CCCCEEEEEGGGGHHHHHHHC---
T ss_pred             CCCCCCCCCEEEEEHHHHHHHHHHHhccc
Confidence            99988788999999999999999999654


No 76 
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=100.00  E-value=3e-45  Score=374.33  Aligned_cols=242  Identities=31%  Similarity=0.611  Sum_probs=186.4

Q ss_pred             CCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEE
Q psy16044         12 RDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAV   91 (436)
Q Consensus        12 ~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~   91 (436)
                      ..||..     ...||+||.+|..++|||+|+|+.....   ..++|+||||+++||||||||+...    ..+..+.|+
T Consensus       378 ~~Cg~~-----~~~rIvgG~~a~~~~~Pw~v~L~~~~~~---~~~~CgGsLIs~~~VLTAAHC~~~~----~~~~~~~V~  445 (625)
T 2f83_A          378 NECTTK-----IKPRIVGGTASVRGEWPWQVTLHTTSPT---QRHLCGGSIIGNQWILTAAHCFYGV----ESPKILRVY  445 (625)
T ss_dssp             CSSCSC-----CCSCCCSSSSCCTTSSTTEEEEEECSSS---SEEEEEEEECSSSEEEECGGGGSSC----CCGGGEEEE
T ss_pred             cccCCC-----CCCceECCEECCCCCCCeEEEEEEecCC---CcEEEEEEEECCCEEEEcHHhCCCC----CCCceEEEE
Confidence            368843     4579999999999999999999875321   2689999999999999999999653    134568899


Q ss_pred             eccccCCccCCceEEEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccC
Q psy16044         92 LGDWDRTEEEKSEVRIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVK  169 (436)
Q Consensus        92 ~g~~~~~~~~~~~~~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~  169 (436)
                      +|..+........+.+.|+++++||+|+  ...||||||||++|+. ++.+++|||||.... ....+..++++|||.+.
T Consensus       446 ~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~-~~~~v~PicLp~~~~-~~~~~~~~~v~GWG~~~  523 (625)
T 2f83_A          446 SGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN-YTDSQRPICLPSKGD-RNVIYTDCWVTGWGYRK  523 (625)
T ss_dssp             ESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCC-CBTTBCCCBCCCGGG-TTCCCCCEEECBCC---
T ss_pred             EEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCccc-CCCceeeeEcCCccC-CccCCCEEEEEEecCCC
Confidence            9987765444444567899999999998  4679999999999999 788899999998532 33467889999999987


Q ss_pred             CCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC-
Q psy16044        170 PKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC-  248 (436)
Q Consensus       170 ~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C-  248 (436)
                      ..+..+..|+++.+++++.++|+..+.. ..+.+.||||+...++.++|.|||||||++.. +++|+|+||+|||.+|+ 
T Consensus       524 ~~~~~s~~L~~~~v~i~~~~~C~~~~~~-~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~-~~~~~lvGIvS~G~~C~~  601 (625)
T 2f83_A          524 LRDKIQNTLQKAKIPLVTNEECQKRYRG-HKITHKMICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQ  601 (625)
T ss_dssp             ---CCCSBCBCCEECCCCHHHHHTTCTT-SCCCTTBCCC----------CCCTTCEEEEEE-TTEEEEEEEEEECCC---
T ss_pred             CCCcCCcccEEEEEEEcCHHHHHHHhcc-CCCCCCeEEeecCCCCCcCCCCCcccceEEEE-CCeEEEEEEEEeCCCCCC
Confidence            6666778899999999999999988753 23567999998776668999999999999974 78999999999998843 


Q ss_pred             -CCCcccccccceecCCccccC
Q psy16044        249 -GVGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       249 -~~~~~y~~v~~~~~~~~~~~~  269 (436)
                       +.+.+|++|..|+.||.+.+.
T Consensus       602 ~~~P~vyT~V~~y~~WI~~~~~  623 (625)
T 2f83_A          602 RERPGVYTNVVEYVDWILEKTQ  623 (625)
T ss_dssp             -CCCCEEEEGGGGHHHHHHTC-
T ss_pred             CCCCeEEEEHHHHHHHHHHHHh
Confidence             346899999999999987653


No 77 
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=100.00  E-value=3.7e-44  Score=324.57  Aligned_cols=223  Identities=28%  Similarity=0.485  Sum_probs=177.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCce-E
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSE-V  105 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~-~  105 (436)
                      |+||++|..++|||+|+|+....    ..++|+||||+++||||||||+..         .+.|++|........... .
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~----~~~~CgGtLI~~~~VLTAAHC~~~---------~~~v~~g~~~~~~~~~~~~~   67 (234)
T 3s9c_A            1 VVGGDECNINEHPFLVALYTSAS----STIHCAGALINREWVLTAAHCDRR---------NIRIKLGMHSKNIRNEDEQI   67 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTE----EEEEEEEEEEETTEEEECGGGCCT---------TEEEEESCSSSSSCCTTCEE
T ss_pred             CCCCeeCCCCCCCeEEEEEECCC----CcEEEeeEEeeCCEEEEchhhcCC---------CceEEEeecccccccCCcce
Confidence            78999999999999999986521    168899999999999999999743         468999988766544333 4


Q ss_pred             EEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        106 RIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       106 ~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      ...+..++.||.|+  ...||||||||++|+. ++..++|||||....   ..+..++++|||.                
T Consensus        68 ~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~-~~~~v~pi~L~~~~~---~~~~~~~v~GwG~----------------  127 (234)
T 3s9c_A           68 RVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVT-YSTHIAPVSLPSRSR---GVGSRCRIMGWGK----------------  127 (234)
T ss_dssp             ECEEEEECCSSCSSTTCGGGCCEEEEESSCCC-CBTTBCCCBCCSSCC---CTTCEEEEEESSC----------------
T ss_pred             EEeeeEEEeCCCCCCCCCcCceEEEEECCccc-cCCcccccccCCCCC---CCCCeEEEEeeCC----------------
Confidence            44566677799997  4578999999999998 677899999987421   2355666666653                


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecC
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLIN  263 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~  263 (436)
                                                                                                      
T Consensus       128 --------------------------------------------------------------------------------  127 (234)
T 3s9c_A          128 --------------------------------------------------------------------------------  127 (234)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEE
Q psy16044        264 GKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  343 (436)
Q Consensus       264 ~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~  343 (436)
                                                                                     +... ..+..|+.+.+.
T Consensus       128 ---------------------------------------------------------------~~~~-~~~~~l~~~~~~  143 (234)
T 3s9c_A          128 ---------------------------------------------------------------ISTT-TYPDVPHCTNIF  143 (234)
T ss_dssp             ---------------------------------------------------------------SBTT-BCCSSCEEEEEE
T ss_pred             ---------------------------------------------------------------CCCC-CCCccccccceE
Confidence                                                                           2211 224568899999


Q ss_pred             eeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccH
Q psy16044        344 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYL  422 (436)
Q Consensus       344 ~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~  422 (436)
                      +++.++|+..+... .+.++|||++...+..+.|.|||||||+++.     .|+||+|||.. |+..+.|++||||+.|+
T Consensus       144 ~~~~~~C~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~  217 (234)
T 3s9c_A          144 IVKHKWCEPLYPWV-PADSRTLCAGILKGGRDTCHGDSGGPLICNG-----EMHGIVAGGSEPCGQHLKPAVYTKVFDYN  217 (234)
T ss_dssp             EECGGGTTTTCTTS-CTTSSEEEEECTTSSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEEGGGGH
T ss_pred             ecCHHHhhhcccCC-CCCcceEEeecCCCCCccCCCCCCCeEEEeC-----CcEEEEEEeCCCCCCCCCCcEEEEhHHhH
Confidence            99999999987632 4689999998766677999999999999953     29999999976 88777899999999999


Q ss_pred             HHHHHHHhhh
Q psy16044        423 PWIRKQINIA  432 (436)
Q Consensus       423 ~WI~~~i~~~  432 (436)
                      +||+++|+..
T Consensus       218 ~WI~~~i~~~  227 (234)
T 3s9c_A          218 NWIQSIIAGN  227 (234)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHcCC
Confidence            9999999765


No 78 
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=100.00  E-value=3.9e-44  Score=370.75  Aligned_cols=246  Identities=34%  Similarity=0.645  Sum_probs=197.0

Q ss_pred             cCCCCCCccCCC-CCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceE
Q psy16044         11 ARDCGVGIRYSH-RQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWT   89 (436)
Q Consensus        11 ~~~CG~~~~~~~-~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~   89 (436)
                      ...||++...+. ...||+||..|..++|||+|+|+...     ..++|+||||+++||||||||+...    .....+.
T Consensus       545 ~~~CG~~~~~~~~~~~RIvGG~~a~~~~~PW~VsL~~~~-----~~~~CGGSLIs~~wVLTAAHCv~~~----~~~~~~~  615 (791)
T 4dur_A          545 SFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRF-----GMHFCGGTLISPEWVLTAAHCLEKS----PRPSSYK  615 (791)
T ss_dssp             SCCTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECTT-----SCEEEEEEEEETTEEEECGGGGSSC----CCGGGCE
T ss_pred             ccCcCCcccccccCCCceECCEECCCCCCCeEEEEEecC-----CCeEEEEEEEeCCEEEECHHHcCCc----CCCceEE
Confidence            457997654432 25799999999999999999997542     1689999999999999999999653    1346789


Q ss_pred             EEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccC
Q psy16044         90 AVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVK  169 (436)
Q Consensus        90 v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~  169 (436)
                      |++|.+.........+.+.|.++++||.+    ||||||||++|+. ++..|+|||||... .....+..++++|||   
T Consensus       616 V~lG~~~~~~~~~~~q~~~V~~i~~hp~~----nDIALLkL~~pv~-~s~~V~PIcLP~~~-~~~~~g~~~~vsGWG---  686 (791)
T 4dur_A          616 VILGAHQEVNLEPHVQEIEVSRLFLEPTR----KDIALLKLSSPAV-ITDKVIPACLPSPN-YVVADRTECFITGWG---  686 (791)
T ss_dssp             EEESCCBSSSCCTTCEEEEEEEEEECTTC----CSCEEEEESSCCC-CCSSCCCCBCCCTT-CCCCTTCEEEEEECC---
T ss_pred             EEeccccccCCCCccEEEEEEEEECCCCC----CceEEEEecCccc-cCCceeeeeccCcc-cccCCCCEEEEEEeC---
Confidence            99999887766666788999999999984    8999999999999 77889999998742 223344555555555   


Q ss_pred             CCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC
Q psy16044        170 PKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG  249 (436)
Q Consensus       170 ~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~  249 (436)
                                                                                                      
T Consensus       687 --------------------------------------------------------------------------------  686 (791)
T 4dur_A          687 --------------------------------------------------------------------------------  686 (791)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcccccccceecCCccccCCCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCC
Q psy16044        250 VGIRYSHRQPRLINGKESIRGAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKP  329 (436)
Q Consensus       250 ~~~~y~~v~~~~~~~~~~~~~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~  329 (436)
                                                                                                  .+..
T Consensus       687 ----------------------------------------------------------------------------~t~~  690 (791)
T 4dur_A          687 ----------------------------------------------------------------------------ETQG  690 (791)
T ss_dssp             ----------------------------------------------------------------------------CC--
T ss_pred             ----------------------------------------------------------------------------CCCC
Confidence                                                                                        3321


Q ss_pred             CCCccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCC
Q psy16044        330 KGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKS  409 (436)
Q Consensus       330 ~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~  409 (436)
                       ...+..|+++.+++++.+.|+........+.+.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       691 -~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~-~~~~~LvGIvS~G~gC~~~  768 (791)
T 4dur_A          691 -TFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFE-KDKYILQGVTSWGLGCARP  768 (791)
T ss_dssp             --CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEE-TTEEEEEEECCTTTCCBBT
T ss_pred             -CCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCcccceEEEe-CCeEEEEEEEEeCCCCCCC
Confidence             11245688889999999999875322235789999998877778999999999999985 7899999999999999987


Q ss_pred             CCCeEEEeCcccHHHHHHHHhhh
Q psy16044        410 GYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       410 ~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      +.|+|||||+.|++||+++|+++
T Consensus       769 ~~PgVYTrVs~y~dWI~~~i~~N  791 (791)
T 4dur_A          769 NKPGVYVRVSRFVTWIEGVMRNN  791 (791)
T ss_dssp             TBCEEEEEGGGTHHHHHHHHHHC
T ss_pred             CCCeEEEEHHHHHHHHHHHHHhC
Confidence            88999999999999999999753


No 79 
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=100.00  E-value=1.2e-44  Score=325.55  Aligned_cols=216  Identities=27%  Similarity=0.513  Sum_probs=182.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCce-E
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSE-V  105 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~-~  105 (436)
                      |+||++|..++|||+|+|+...      .++|+||||+++||||||||+...     ....+.|++|.++........ +
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLI~~~~VLTAAHC~~~~-----~~~~~~V~~G~~~~~~~~~~~~~   69 (225)
T 1a7s_A            1 IVGGRKARPRQFPFLASIQNQG------RHFCGGALIHARFVMTAASCFQSQ-----NPGVSTVVLGAYDLRRRERQSRQ   69 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECGGGC---------CCSEEEEESCSSTTSCCTTTCE
T ss_pred             CCCCEECCCCCCCcEEEEecCC------CcEEEEEEeeCCEEEEchhccCCC-----CCCceEEEEeeeECCCCCCccee
Confidence            6899999999999999998652      689999999999999999999652     345689999998776544333 7


Q ss_pred             EEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        106 RIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       106 ~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      .+.|++++.| +|+  ...||||||||++|+. ++..++|+|||.... ....+..++++|||.+...+..+..|++..+
T Consensus        70 ~~~v~~i~~h-~y~~~~~~~DIALl~L~~~~~-~~~~v~pi~L~~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~  146 (225)
T 1a7s_A           70 TFSISSMSEN-GYDPQQNLNDLMLLQLDREAN-LTSSVTILPLPLQNA-TVEAGTRCQVAGWGSQRSGGRLSRFPRFVNV  146 (225)
T ss_dssp             EEEEEEEECS-SCBTTTTBSCCEEEEESSCCC-CBTTBCCCCCCCTTC-CCCTTCEEEEEESCCSSTTCCCCSSCEEEEE
T ss_pred             EEeEEEEecc-cccCCCCcCCEEEEEcCCccc-CCCceeEEEcCCCcC-CCCCCCEEEEEeCCcCCCCCCcccccceeee
Confidence            8899999999 997  4679999999999999 778899999998643 3457889999999998877777788999999


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC-Ccccccccceec
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV-GIRYSHRQPRLI  262 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~-~~~y~~v~~~~~  262 (436)
                      ++++.+.|+.          .|+|++...+..+.|.|||||||++.   +  +|+||+|||...|+. +.+|++|..|..
T Consensus       147 ~~~~~~~C~~----------~~~Ca~~~~~~~~~C~GDSGgPl~~~---g--~l~Gi~S~g~~~C~~~p~vyt~V~~~~~  211 (225)
T 1a7s_A          147 TVTPEDQCRP----------NNVCTGVLTRRGGICNGDGGTPLVCE---G--LAHGVASFSLGPCGRGPDFFTRVALFRD  211 (225)
T ss_dssp             EECCGGGSCT----------TEEEEECSSSSCBCCTTCTTCEEEET---T--EEEEEEEEECSSTTSSCEEEEEGGGGHH
T ss_pred             EECCHHHhcc----------CceEEeccCCCCCcccCCCcchheeC---C--EEEEEEEEccCCcCCCCcEEEEhHHhHH
Confidence            9999999965          79999987766899999999999985   2  799999999555765 789999999999


Q ss_pred             CCccccCCC
Q psy16044        263 NGKESIRGA  271 (436)
Q Consensus       263 ~~~~~~~~~  271 (436)
                      ||.+.+...
T Consensus       212 WI~~~~~~~  220 (225)
T 1a7s_A          212 WIDGVLNNP  220 (225)
T ss_dssp             HHHHHHHSC
T ss_pred             HHHHHhcCC
Confidence            998877543


No 80 
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=100.00  E-value=1.3e-44  Score=325.18  Aligned_cols=218  Identities=25%  Similarity=0.420  Sum_probs=181.0

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|.          +.|+||||+++||||||||+....    ....+.|++|..+....  ..+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~----------~~CgGtLI~~~~VLTAAHC~~~~~----~~~~~~v~~G~~~~~~~--~~~~   64 (224)
T 3beu_A            1 VVGGTRAAQGEFPFMVRLS----------MGCGGALYAQDIVLTAAHCVSGSG----NNTSITATGGVVDLQSS--SAVK   64 (224)
T ss_dssp             CBTCEECCTTTSTTEEEET----------TTEEEEEEETTEEEECGGGSCSSE----EBCCCEEEESCSBTTCT--TCEE
T ss_pred             CCCCeECCCCCCCEEEEEC----------CceeEEEeeCCEEEEChhhcCCCC----CcceEEEEeeEeecCCC--CceE
Confidence            6899999999999999984          359999999999999999997531    23567899998776543  2367


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.+.++++||+|+  ...||||||||++|+.     +.|+||+....   ..+..++++|||.+...+..+..|++..++
T Consensus        65 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~-----~~~i~l~~~~~---~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~  136 (224)
T 3beu_A           65 VRSTKVLQAPGFTKETYGKDWALIKLAQPIN-----QPTLKIATTTA---YNQGTFTVAGWGANREGGSQQRYLLKANVP  136 (224)
T ss_dssp             EEEEEEEECTTCCCGGGSCCCEEEEESSCCC-----SCCCEECCSST---TSSSEEEEEESSCSSTTCCCCSBCEEEEEE
T ss_pred             EEEEEEEeCCCcCCCcCCCCEEEEEeCCCCC-----CCccccccccc---cCCCEEEEEecCccCCCCcccceeeEeeCc
Confidence            8899999999997  4689999999999986     35788886422   234589999999988777777889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCcccccccceec
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIRYSHRQPRLI  262 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~y~~v~~~~~  262 (436)
                      +++.+.|+..+.. ....+.|||++...+..+.|.|||||||++...+++|+|+||+|||.+|+  +.+.+|++|.+|..
T Consensus       137 ~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~  215 (224)
T 3beu_A          137 FVSDAACRSSSSF-ILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFAS  215 (224)
T ss_dssp             EECHHHHHHHCSS-CCCGGGEEEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHH
T ss_pred             ccCHHHhhhhcCC-ccCCCCeEEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHH
Confidence            9999999988753 23456899999776668999999999999986678999999999998744  24679999999999


Q ss_pred             CCccccC
Q psy16044        263 NGKESIR  269 (436)
Q Consensus       263 ~~~~~~~  269 (436)
                      ||.+.+.
T Consensus       216 WI~~~~~  222 (224)
T 3beu_A          216 AIASAAR  222 (224)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9987654


No 81 
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=100.00  E-value=1.5e-44  Score=327.49  Aligned_cols=221  Identities=21%  Similarity=0.377  Sum_probs=188.4

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|..++|||+|+|+...      .++|+||||+++||||||||+...     ....+.|++|..+....   .+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLIs~~~VLTAAHC~~~~-----~~~~~~v~~G~~~~~~~---~~~   66 (235)
T 3h7t_A            1 IIGGKKSDITKEPWAVGVLVDE------KPFCGGSILTANFVITAAQCVDGT-----KPSDISIHYGSSYRTTK---GTS   66 (235)
T ss_dssp             CBTCEECCTTTSTTEEEEEETT------SCCEEEEESSSSEEEECHHHHTTC-----CGGGEEEEESCSBSSSS---SEE
T ss_pred             CCCCEECCCCCCCcEEEEecCC------CceEeEEEeeCCEEEECHHHCCCC-----CCCeeEEEcCccccccC---Cce
Confidence            7899999999999999998753      678999999999999999999642     35678999998876532   377


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCC-ceeeeeecCCCCCCCCCCCcEEEEecCccCCCC-Cccccceeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDK-GVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIR  182 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~-~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~-~~~~~l~~~~  182 (436)
                      +.+.++++| .|+  ...||||||+|++|+. ++. .++|||||... .....+..++++|||.+...+ ..+..|+++.
T Consensus        67 ~~v~~i~~h-~y~~~~~~~DiAll~L~~~v~-~~~~~v~pi~Lp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~  143 (235)
T 3h7t_A           67 VMAKKIYIV-RYHPLTMQNNYAVIETEMPIK-LDDKTTKKIELPSLL-YDPEPDTSVLVSGWGSTNFKSLEYSGDLMEAN  143 (235)
T ss_dssp             EEEEEEEEC-SCBTTTTBTCCEEEEESSCCC-CCSSSCCCCBCCCTT-CCCCTTCEEEEEECCCSSTTCCCCCSBCEEEE
T ss_pred             eeeeeEEee-ecCCCCCCCCeEEEEeccccc-cCCccccceecCccc-cCCCCCCeEEEEecCCCCCCCCchhHHHhhCC
Confidence            899999999 997  4689999999999999 566 89999999864 335678999999999988665 6678899999


Q ss_pred             eeccchhhhhhhcCCC---cCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccc
Q psy16044        183 VPLHNISVCRDKYGDS---VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHR  257 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~---~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v  257 (436)
                      +++++.+.|+..+...   ....+.||||+...+..+.|.|||||||++++     .|+||+|||.+ |+  .+.+|++|
T Consensus       144 ~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~-C~~~~p~vyt~v  217 (235)
T 3h7t_A          144 FTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNG-----TLVGVASYISS-MPSEFPSVFLRV  217 (235)
T ss_dssp             EEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEETT-----EEEEEECCCTT-CCTTSCEEEEEG
T ss_pred             CceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCccccCCCCCceeeCC-----eEEEEEEecCC-CCCCCCceEEEH
Confidence            9999999999887542   23567999999887779999999999999843     39999999988 75  67799999


Q ss_pred             cceecCCccccCC
Q psy16044        258 QPRLINGKESIRG  270 (436)
Q Consensus       258 ~~~~~~~~~~~~~  270 (436)
                      .+|..||.+.+..
T Consensus       218 ~~~~~WI~~~i~~  230 (235)
T 3h7t_A          218 GYYVLDIKDIISG  230 (235)
T ss_dssp             GGGHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999887754


No 82 
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=100.00  E-value=1.4e-44  Score=323.38  Aligned_cols=212  Identities=30%  Similarity=0.546  Sum_probs=181.1

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...      .++|+||||+++||||||||+...     ....+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLI~~~~VLTAAHC~~~~-----~~~~~~v~~G~~~~~~~~~~~~~   69 (218)
T 2z7f_E            1 IVGGRRARPHAWPFMVSLQLRG------GHFCGATLIAPNFVMSAAHCVANV-----NVRAVRVVLGAHNLSRREPTRQV   69 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEETT------EEEEEEEEEETTEEEECHHHHTTS-----CGGGCEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCccCcEEEEEeCC------CcEEEEEEccCCEEEEcHHhcCCC-----CcCcEEEEEeceecCCCCCceEE
Confidence            6899999999999999998752      689999999999999999999653     24568999999887766666688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|++++.| +|+  ...||||||||++|+. ++..++|||||.... ....+..++++|||.+...+..+..|++..++
T Consensus        70 ~~v~~i~~h-~y~~~~~~~DIALl~L~~~~~-~~~~v~picL~~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~  146 (218)
T 2z7f_E           70 FAVQRIFEN-GYDPVNLLNDIVILQLNGSAT-INANVQVAQLPAQGR-RLGNGVQCLAMGWGLLGRNRGIASVLQELNVT  146 (218)
T ss_dssp             EEEEEEEES-CCBTTTTBSCCEEEEESSCCC-CSSSCCCCCCCCTTC-CCCTTCEEEEEESSBCSSSCCBCSBCEEEEEE
T ss_pred             EEEEEEEcc-CCCCCCCCCCEEEEEECCcCc-CCCceeccCcCCCCC-CCCCCCEEEEEEeCCCCCCCCccchheEeeeE
Confidence            999999999 997  4689999999999999 788899999998643 34578899999999998776677889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---Cccccccccee
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---GIRYSHRQPRL  261 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~~~  261 (436)
                      ++ .+.|...          ++|++...+..++|.|||||||+++.     +|+||+||+.+.|+.   +.+|++|..|.
T Consensus       147 ~~-~~~C~~~----------~~Ca~~~~~~~~~C~GDSGgPl~~~~-----~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~  210 (218)
T 2z7f_E          147 VV-TSLCRRS----------NVCTLVRGRQAGVCFGDSGSPLVCNG-----LIHGIASFVRGGCASGLYPDAFAPVAQFV  210 (218)
T ss_dssp             EE-CTTCCTT----------SEEEECTTSCCBCCTTCTTCEEEETT-----EEEEEEEEESSSTTCSSSCEEEEEGGGGH
T ss_pred             Ee-hhHcCcc----------eeeeccCCCCCeeCCCcCCCceEEcc-----EEEEEEEeCCccCCCCCCCeEEEEHHHhH
Confidence            99 8999753          89999877668999999999999842     699999994433764   57999999999


Q ss_pred             cCCcccc
Q psy16044        262 INGKESI  268 (436)
Q Consensus       262 ~~~~~~~  268 (436)
                      .||.+.+
T Consensus       211 ~WI~~~~  217 (218)
T 2z7f_E          211 NWIDSII  217 (218)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998754


No 83 
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=100.00  E-value=3.3e-44  Score=323.86  Aligned_cols=216  Identities=26%  Similarity=0.462  Sum_probs=181.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCcc-CCceE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEE-EKSEV  105 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~-~~~~~  105 (436)
                      |+||++|..++|||+|+|+. +      .++|+||||+++||||||||+..         .+.|++|..+.... ....+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-~------~~~CgGsLIs~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   64 (231)
T 2aiq_A            1 VIGGDECNINEHRFLALVYA-N------GSLCGGTLINQEWVLTARHCDRG---------NMRIYLGMHNLKVLNKDALR   64 (231)
T ss_dssp             CBSCEECCTTSCTTEEEEEE-T------TEEEEEEECSSSEEEECGGGCCS---------SCEEEESCSCTTSCCTTCEE
T ss_pred             CCCCeECCCCCCCeEEEEEc-C------CCeEEEEEEeCCEEEEcHHcCCC---------CCEEEEecccccccCCCceE
Confidence            78999999999999999973 1      58899999999999999999854         35799998876543 23457


Q ss_pred             EEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCC-CCccccceeee
Q psy16044        106 RIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPK-GDLVSKLRQIR  182 (436)
Q Consensus       106 ~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~-~~~~~~l~~~~  182 (436)
                      .+.+.+++.||+|+  ...||||||||++|+. ++..++|||||....   ..+..++++|||.+... ...+..|+++.
T Consensus        65 ~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~-~~~~v~picL~~~~~---~~~~~~~v~GwG~~~~~~~~~~~~l~~~~  140 (231)
T 2aiq_A           65 RFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVR-NSAHIAPLSLPSNPP---SVGSVCRIMGWGTITSPNATLPDVPHCAN  140 (231)
T ss_dssp             ECEEEEECCSSCCSSSTTTTCCEEEEESSCCC-CBTTBCCCCCCSSCC---CTTCEEEEEESSCSSSSSCCCCSSCEEEE
T ss_pred             EEEEEEEEECCCCCCCCCCCCEEEEEecCCCC-CCCcEEeeECCCCCC---CCCCEEEEEeCCccCCCCCccCchhhhcc
Confidence            78899999999997  4689999999999999 778899999998532   46889999999987644 34577899999


Q ss_pred             eeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---Ccccccccc
Q psy16044        183 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---GIRYSHRQP  259 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~  259 (436)
                      +++++.+.|+..+..   ..+.|||++...+..+.|.|||||||+++   +  +|+||+|||...|+.   +.+|++|..
T Consensus       141 ~~~~~~~~C~~~~~~---~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~  212 (231)
T 2aiq_A          141 INILDYAVCQAAYKG---LAATTLCAGILEGGKDTCKGDSGGPLICN---G--QFQGILSVGGNPCAQPRKPGIYTKVFD  212 (231)
T ss_dssp             EEEECHHHHHHHCTT---CCSSEEEEECTTCSCBCCTTCTTCEEEET---T--EEEEEEEEECSSTTCTTCCEEEEEGGG
T ss_pred             ceecchhhhhhhhcC---CCcCcEEeccCCCCCcccCCcCCCcEEEC---C--EEEEEEEEeCCCCCCCCCCEEEEEHHH
Confidence            999999999988754   56799999876666899999999999984   2  699999999555654   679999999


Q ss_pred             eecCCccccCC
Q psy16044        260 RLINGKESIRG  270 (436)
Q Consensus       260 ~~~~~~~~~~~  270 (436)
                      |..||.+.+..
T Consensus       213 ~~~WI~~~~~~  223 (231)
T 2aiq_A          213 YTDWIQSIISG  223 (231)
T ss_dssp             GHHHHHHHHHT
T ss_pred             HHHHHHHHHcC
Confidence            99999877653


No 84 
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=100.00  E-value=9.4e-44  Score=321.92  Aligned_cols=219  Identities=27%  Similarity=0.427  Sum_probs=181.5

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceE-
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEV-  105 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~-  105 (436)
                      |+||+++..++|||+|+|+...      .++|+||||+++||||||||+..         .+.|++|...........+ 
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGtLI~~~~VLTAAHC~~~---------~~~v~~g~~~~~~~~~~~~~   65 (234)
T 3s69_A            1 VIGGDECNINEHRSLVAFFNST------GFFCSGTLINEEWVLTAAHCDNT---------NFQMKLGVHSKKVLNEDEQT   65 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEECSS------CEEEEEEEEETTEEEECGGGCCS---------SCEEEESCCCSSSCCTTCEE
T ss_pred             CCCCccCCCCCCceEEEEeeCC------CeEEeEEEeeCCEEEEchhhCCC---------CceEEecccccccccCCcce
Confidence            7899999999999999997642      68999999999999999999743         3678899877654443333 


Q ss_pred             EEeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCC-Cccccceeee
Q psy16044        106 RIPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIR  182 (436)
Q Consensus       106 ~~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~-~~~~~l~~~~  182 (436)
                      ...+..++.||.|+  ...||||||||++|+. ++..++|||||...   ...+..++++|||.+.... ..+..|+...
T Consensus        66 ~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~-~~~~v~pi~l~~~~---~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~  141 (234)
T 3s69_A           66 RNPKEKFICPNKKNDEVLDKDIMLIKLDSRVS-NSEHIVPLSLPSSP---PSVGSVCHIMGWGSITPIKVTYPDVPYCAY  141 (234)
T ss_dssp             ECEEEEEECTTCCTTCTTSSCCEEEEESSCCC-CBTTBCCCCCCSSC---CCTTCEEEEEESSCSSSSSCCCCSSCEEEE
T ss_pred             eeceEEEECCCccCCCCCcccEEEEeeCCcCC-CCCcceeeecCCCC---CCCCCEEEEEECCCCCCCCcCcccccceeE
Confidence            44566677799997  4679999999999999 78889999999853   2348899999999887544 5567899999


Q ss_pred             eeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---Ccccccccc
Q psy16044        183 VPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---GIRYSHRQP  259 (436)
Q Consensus       183 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~  259 (436)
                      +.+++.+.|+..+.. ....+.+||++...+..+.|.|||||||++..     .|+||+|||.+.|+.   +.+|++|.+
T Consensus       142 ~~~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~  215 (234)
T 3s69_A          142 INLLDDAVCQAGYPE-LLTEYRTLCAGILEGGKDTCGGDSGGPLICNG-----QFQGIVSFGAHPCGQGLKPGVYTKVFD  215 (234)
T ss_dssp             EEEECHHHHHHHCTT-CCTTSCEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEEGGG
T ss_pred             EeecCHHHHhhhccc-ccCCcceEeccCCCCCCccCCCCCccceEEcC-----EEEEEEEEcccccCCCCCCcEEeeHHH
Confidence            999999999998764 33456899999877778999999999999853     399999999876764   579999999


Q ss_pred             eecCCccccCC
Q psy16044        260 RLINGKESIRG  270 (436)
Q Consensus       260 ~~~~~~~~~~~  270 (436)
                      |..||.+.+..
T Consensus       216 ~~~WI~~~i~~  226 (234)
T 3s69_A          216 YNHWIQSIIAG  226 (234)
T ss_dssp             GHHHHHHHHHT
T ss_pred             HHHHHHHHhcC
Confidence            99999877653


No 85 
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=100.00  E-value=6.1e-44  Score=331.54  Aligned_cols=216  Identities=20%  Similarity=0.298  Sum_probs=167.8

Q ss_pred             CcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEee
Q psy16044         30 GKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPV  109 (436)
Q Consensus        30 G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v  109 (436)
                      |..+..++|||+|+|+...     ..++|+||||+++||||||||+..       ...+.|++|.++...   ..+.+.|
T Consensus        56 g~~a~~~~~Pw~v~l~~~~-----~~~~CgGtLI~~~~VLTAAHC~~~-------~~~~~V~~G~~~~~~---~~~~~~v  120 (283)
T 3f1s_B           56 KRAPDLQDLPWQVKLTNSE-----GKDFCGGVIIRENFVLTTAKCSLL-------HRNITVKTYFNRTSQ---DPLMIKI  120 (283)
T ss_dssp             -------CCTTEEEEECTT-----SCEEEEEEEEETTEEEECHHHHTS-------CSSCEEEECTTC-CC---CCEEEEE
T ss_pred             CccccccccCCEEEEEecC-----CCeeeccEEecCCEEEEcHHhcCc-------cCceEEEEeeeeCCC---CcEEEEe
Confidence            9999999999999998632     168999999999999999999954       246789999865533   4578899


Q ss_pred             eEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCC--CCCCCCCcEEEEecCccCCCCCccccceeeeeec
Q psy16044        110 ERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADK--RPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPL  185 (436)
Q Consensus       110 ~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~--~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~  185 (436)
                      +++++||+|+  +..||||||||++|+. ++.+++|||||....  ..+..+..++++|||.  ..+..+..|+++.+++
T Consensus       121 ~~i~~Hp~y~~~~~~nDIALl~L~~pv~-~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~--~~~~~~~~L~~~~v~~  197 (283)
T 3f1s_B          121 THVHVHMRYDADAGENDLSLLELEWPIQ-CPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTRPVTL  197 (283)
T ss_dssp             EEEEECTTCBTTTTBTCCEEEEESSCCC-TTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBC--C-------CEEEEEEE
T ss_pred             EEEEECCCCCCCCCCCCEEEEEeCCccc-CCCCEEeEECCCCccccccccCCCEEEEEECCC--CCCCCCceeeEEEEeE
Confidence            9999999997  4689999999999999 788999999998531  2345688999999998  3455677899999999


Q ss_pred             cchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccceecC
Q psy16044        186 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPRLIN  263 (436)
Q Consensus       186 ~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~~~~  263 (436)
                      ++.+.|+..+..  ..+++||||+...+   .|.|||||||++. .+++|+|+||+|||. +|.  .+.+||+|..|+.|
T Consensus       198 ~~~~~C~~~~~~--~~~~~~~Ca~~~~~---~~~gDSGgPlv~~-~~~~~~l~GIvS~g~-c~~~~~p~vyt~V~~y~~W  270 (283)
T 3f1s_B          198 VEGEECGQVLNV--TVTTRTYCERSSVA---AMHWMDGSVVTRE-HRGSWFLTGVLGSQP-VGGQAHMVLVTKVSRYSLW  270 (283)
T ss_dssp             ECHHHHHHHHTS--CCCTTEEEEECSSC---GGGBCTTCEEEEE-CSSCEEEEEEECCCS-GGGCSSEEEEEEGGGGHHH
T ss_pred             eCHHHHhhhhcC--CCCCCeEcccCCCC---CCCCCCCCcEEEE-ECCEEEEEEEEEeCC-CCCCCcceEEEEhHHhHHH
Confidence            999999998864  35679999985543   5677999999997 578999999999985 343  34599999999999


Q ss_pred             CccccCC
Q psy16044        264 GKESIRG  270 (436)
Q Consensus       264 ~~~~~~~  270 (436)
                      |.+.+..
T Consensus       271 I~~~~~~  277 (283)
T 3f1s_B          271 FKQIMNA  277 (283)
T ss_dssp             HHHHHTC
T ss_pred             HHHHhhc
Confidence            9887764


No 86 
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=100.00  E-value=1.9e-43  Score=318.82  Aligned_cols=222  Identities=27%  Similarity=0.470  Sum_probs=181.6

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+......  ..++|+||||+++||||||||+.+       ...+.|++|.......   .+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~--~~~~CgGtLIs~~~VLTAAHC~~~-------~~~~~v~~G~~~~~~~---~~~   68 (230)
T 2hlc_A            1 IINGYEAYTGLFPYQAGLDITLQDQ--RRVWCGGSLIDNKWILTAAHCVHD-------AVSVVVYLGSAVQYEG---EAV   68 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTS--CEEEEEEEEEETTEEEECHHHHTT-------EEEEEEEESCSBTTCC---SEE
T ss_pred             CCCCeECCCCCCCcEEEEEEEecCC--CCEEEEEEEeeCCEEEECHHHCCC-------CcceEEEEeeeecCCC---CeE
Confidence            6899999999999999998753222  268999999999999999999864       3567899998766542   377


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCC-CCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~-~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      +.++++++||+|+  ...||||||||+ |+. ++..++|||||..... ....+..++++|||.+....   ..|++..+
T Consensus        69 ~~v~~i~~hp~y~~~~~~~DiALl~L~-~~~-~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~---~~l~~~~~  143 (230)
T 2hlc_A           69 VNSERIISHSMFNPDTYLNDVALIKIP-HVE-YTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDT---VILQYTYN  143 (230)
T ss_dssp             EECSEEEECTTCBTTTTBTCCEEEECS-CCC-CCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCC---CBCEEEEE
T ss_pred             EEEEEEEECCCCCCCCccccEEEEEec-CCC-cCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCC---ceeEEEEE
Confidence            8999999999997  468999999999 998 7788999999985321 23467889999999876443   67999999


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcC-CCCCC--Ccccccccce
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GYCGV--GIRYSHRQPR  260 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~-~~C~~--~~~y~~v~~~  260 (436)
                      .+++.+.|+..+... ...+.|||++... ..++|.|||||||++..   +++|+||+|||. ..|..  +.+|++|..+
T Consensus       144 ~~~~~~~C~~~~~~~-~~~~~~~Ca~~~~-~~~~C~GDSGgPl~~~~---~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~  218 (230)
T 2hlc_A          144 LVIDNDRCAQEYPPG-IIVESTICGDTSD-GKSPCFGDSGGPFVLSD---KNLLIGVVSFVSGAGCESGKPVGFSRVTSY  218 (230)
T ss_dssp             EEECHHHHHTTSCTT-SSCTTEEEECCTT-SCBCCTTCTTCEEEEGG---GTEEEEEEEECCTTCTTSCCCEEEEEGGGG
T ss_pred             EEeCHHHhhhhhCCC-cccCCeEEecCCC-CCCcCCCCCCCeeEECc---CCEEEEEEEEeCCCCCCCCCCCEEEEhHHh
Confidence            999999999887542 3567999998744 47899999999999863   348999999997 35753  5789999999


Q ss_pred             ecCCccccCC
Q psy16044        261 LINGKESIRG  270 (436)
Q Consensus       261 ~~~~~~~~~~  270 (436)
                      ..||.+.+..
T Consensus       219 ~~WI~~~~~~  228 (230)
T 2hlc_A          219 MDWIQQNTGI  228 (230)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHhhCc
Confidence            9999887653


No 87 
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=100.00  E-value=5.8e-43  Score=313.76  Aligned_cols=215  Identities=32%  Similarity=0.575  Sum_probs=180.9

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+..... +  .++|+||||+++||||||||+...     ....+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~-~--~~~CgGtLIs~~~VLTAAHC~~~~-----~~~~~~v~~G~~~~~~~~~~~~~   72 (221)
T 1fuj_A            1 IVGGHEAQPHSRPYMASLQMRGNP-G--SHFCGGTLIHPSFVLTAAHCLRDI-----PQRLVNVVLGAHNVRTQEPTQQH   72 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTBT-T--CCCEEEEEEETTEEEECGGGGSSS-----CGGGEEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCcCCEEEEEEecCC-C--CEEEEEEEecCCEEEEchHhcCcC-----CCCceEEEEeeeeccCCCCceEE
Confidence            689999999999999999875321 1  588999999999999999999763     23568999999887766666788


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.|.+++.| +|+  ...||||||||++|+. ++..++|||||.... ....+..++++|||.+...+..+..|++..++
T Consensus        73 ~~v~~i~~h-~y~~~~~~~DiALl~L~~~~~-~~~~v~picL~~~~~-~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  149 (221)
T 1fuj_A           73 FSVAQVFLN-NYDAENKLNDILLIQLSSPAN-LSASVATVQLPQQDQ-PVPHGTQCLAMGWGRVGAHDPPAQVLQELNVT  149 (221)
T ss_dssp             EEEEEEEEC-CCBTTTTBCCCEEEEESSCCC-CCSSCCCCBCCCTTC-CCCTTCEEEEEESSBSCSSSCBCSBCEEEEEE
T ss_pred             EEEEEEEeC-CCCCCCCcccEEEEEeCCccc-cCCcceeeECCCCcC-CCCCCCEEEEEEeCCCCCCCCHHHHhhcccce
Confidence            999999999 997  4689999999999999 788899999998643 34578999999999988766677889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---Cccccccccee
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---GIRYSHRQPRL  261 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---~~~y~~v~~~~  261 (436)
                      ++ ...|..          .++|++...+..+.|.|||||||+++   +  +|+||+||+...|+.   +.+|++|..|.
T Consensus       150 ~~-~~~C~~----------~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~  213 (221)
T 1fuj_A          150 VV-TFFCRP----------HNICTFVPRRKAGICFGDSGGPLICD---G--IIQGIDSFVIWGCATRLFPDFFTRVALYV  213 (221)
T ss_dssp             EE-CTTCCT----------TEEEEECSSSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSTTCSSSCEEEEEGGGGH
T ss_pred             EE-eeecCC----------ceeeeccCCCCCCCCCCCCCCeeEEC---C--EEeEEEEEeccCCCCCCCCcEEEeHHHHH
Confidence            99 888865          38999987766899999999999984   2  699999996522653   67999999999


Q ss_pred             cCCcccc
Q psy16044        262 INGKESI  268 (436)
Q Consensus       262 ~~~~~~~  268 (436)
                      .||.+.+
T Consensus       214 ~WI~~~i  220 (221)
T 1fuj_A          214 DWIRSTL  220 (221)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998754


No 88 
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=100.00  E-value=4.3e-43  Score=316.29  Aligned_cols=222  Identities=20%  Similarity=0.322  Sum_probs=185.2

Q ss_pred             eCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEE
Q psy16044         28 INGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRI  107 (436)
Q Consensus        28 ~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~  107 (436)
                      .||++|.+++|||+|+|+.....   ..++|+||||+++||||||||+...     ....+.|++|..+...... .+.+
T Consensus         1 ~gG~~a~~~~~Pw~v~l~~~~~~---~~~~CgGtLI~~~~VLTAAHC~~~~-----~~~~~~v~~g~~~~~~~~~-~~~~   71 (228)
T 3h7o_A            1 KGGEKTDIKQVPWTVAVRTYPGE---ESLTCGGAILSQWFVLTAAHCVFDQ-----KPETIVIQYESTNLWEDPG-KSDP   71 (228)
T ss_dssp             CCCEECCGGGSTTEEEEEECGGG---CCEEEEEEESSSSEEEECHHHHTTS-----CGGGCEEEESCSBTTTBCC-EEEC
T ss_pred             CCCccCCcCCCCeEEEEeecCCC---CceEeeeEEeeCCEEEEcHHhcccC-----CCCcEEEEecccccccCCC-ceee
Confidence            37999999999999999875421   1348999999999999999999652     3567899999887664333 3778


Q ss_pred             eeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCC-ceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        108 PVERIRVHEEFH--NYHHDIALLKLSRPTSARDK-GVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       108 ~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~-~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      .+++++.| .|+  ...||||||||++|+. ++. .++|+|||... .....+..++++|||.+...+..+..|+++.++
T Consensus        72 ~v~~i~~h-~y~~~~~~~DIALl~L~~~v~-~~~~~v~pi~lp~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~  148 (228)
T 3h7o_A           72 YVSHVYLS-FYRQETMENDIAILELSRPLK-LDGLKSKPAKLPDIE-FRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLT  148 (228)
T ss_dssp             CEEEEEES-SCBTTTTBTCCEEEEESSCCC-CCSSSSCCCBCCCTT-CCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEE
T ss_pred             eEEEEEcc-ccCCCCccCCEEEEEECCccc-ccccccccccCCccc-cCCCCCCeeEEEEEecCCCCCCcccccccceeE
Confidence            89999999 997  4689999999999999 566 89999999863 335678999999999988777777889999999


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccceec
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPRLI  262 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~~~  262 (436)
                      +++.+.|+..+.. ....+.+||++...  .+.|.|||||||+++.     .|+||+|||.+ |+  .+.+|++|..|..
T Consensus       149 ~~~~~~C~~~~~~-~~~~~~~~Ca~~~~--~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~-c~~~~p~vyt~v~~~~~  219 (228)
T 3h7o_A          149 VVDLDECRTKYGP-IFLSLQVFCAQKVG--VSLESGDAGDPTVQQD-----TLVGVAAYFPK-RPEGAPEVFTKVGSYVS  219 (228)
T ss_dssp             EECHHHHHHHHTT-SCCCSSEEEEECTT--CCCCGGGTTCEEEETT-----EEEEEECCCTT-CCTTCCEEEEEGGGTHH
T ss_pred             EEcHHHHHHHhcC-ccCCceEEecCCCC--CcCCCCCCCCcceecC-----eEEEEEeecCc-CCCCCCcEEEEHHHHHH
Confidence            9999999998865 33567999998765  7899999999999843     39999999987 54  5679999999999


Q ss_pred             CCccccCC
Q psy16044        263 NGKESIRG  270 (436)
Q Consensus       263 ~~~~~~~~  270 (436)
                      ||.+.+.+
T Consensus       220 WI~~~i~~  227 (228)
T 3h7o_A          220 WIQDIIKK  227 (228)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhhc
Confidence            99887653


No 89 
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=100.00  E-value=8.6e-42  Score=322.74  Aligned_cols=214  Identities=21%  Similarity=0.300  Sum_probs=177.9

Q ss_pred             CcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEee
Q psy16044         30 GKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPV  109 (436)
Q Consensus        30 G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v  109 (436)
                      |+.+..++|||+|+|+...     ..++|+||||+++||||||||+..       ...+.|++|......   ..+.+.|
T Consensus        97 G~~a~~~~~Pw~v~l~~~~-----~~~~CgGtLIs~~~VLTAAHC~~~-------~~~~~V~~G~~~~~~---~~~~~~v  161 (317)
T 3h5c_B           97 KRAPDLQDLPWQVKLTNSE-----GKDFCGGVIIRENFVLTTAKCSLL-------HRNITVKTYFNRTSQ---DPLMIKI  161 (317)
T ss_dssp             CSSCCTTCCTTEEEEECSS-----SCEEEEEEEEETTEEEECHHHHHS-------CSSCEEEECTTSCTT---SCEEEEE
T ss_pred             cccCccCCCCcEEEEeccC-----CceeeeeEEeeCCEEEEChHhcCc-------CCceEEEEeeecCCC---CcEEEEe
Confidence            8999999999999998532     168999999999999999999854       245789999875533   4578899


Q ss_pred             eEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCC--CCCCCCCcEEEEecCccCCCCCccccceeeeeec
Q psy16044        110 ERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADK--RPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPL  185 (436)
Q Consensus       110 ~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~--~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~  185 (436)
                      +++++||+|+  +..||||||||++|+. ++.+++|||||....  ..+..+..++++|||.  ..+..+..|+++.+++
T Consensus       162 ~~i~~Hp~y~~~~~~~DIALl~L~~pv~-~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~--~~~~~~~~L~~~~v~~  238 (317)
T 3h5c_B          162 THVHVHMRYDADAGENDLSLLELEWPIQ-CPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTRPVTL  238 (317)
T ss_dssp             EEEEECTTCBTTTTBSCCEEEEESSCCC-TTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCT--TCCSSSCCCBCCEEEE
T ss_pred             eEEEECCCCCCCCCCCCeEEEEeCCccc-CCCCccceeCCCcccccccccCCCeEEEEecCC--CCCCCCccceEEEEEE
Confidence            9999999997  4679999999999999 788999999998531  2345688999999998  3456677899999999


Q ss_pred             cchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccceecC
Q psy16044        186 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPRLIN  263 (436)
Q Consensus       186 ~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~~~~  263 (436)
                      ++.++|+..+..  ..++.||||+...   +.|.|||||||++. .+++|+|+||+|||. +|.  .+.+|++|..|..|
T Consensus       239 ~~~~~C~~~~~~--~~~~~~~Ca~~~~---~~~~gDsGgPl~~~-~~~~~~l~Gi~S~g~-~~~~~~p~vyt~V~~y~~W  311 (317)
T 3h5c_B          239 VEGEECGQVLNV--TVTTRTYCERSSV---AAMHWMDGSVVTRE-HRGSWFLTGVLGSQP-VGGQAHMVLVTKVSRYSLW  311 (317)
T ss_dssp             ECHHHHHHHHTC--CCCTTEEEEECSC---CCCCCCTTCEEEEE-ETTEEEEEEEECCCC-SSCCTTEEEEEEGGGCHHH
T ss_pred             ECHHHHhhhhcC--cCCCceeECCCCC---CCcCCCCCCCEEEe-cCCEEEEEEEEEECC-CCCCCcceEEEEhHHhHHH
Confidence            999999998864  3567999998543   46789999999997 478999999999985 343  34599999999999


Q ss_pred             Ccccc
Q psy16044        264 GKESI  268 (436)
Q Consensus       264 ~~~~~  268 (436)
                      |.+.+
T Consensus       312 I~~~i  316 (317)
T 3h5c_B          312 FKQIM  316 (317)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98754


No 90 
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=100.00  E-value=5.5e-40  Score=330.84  Aligned_cols=235  Identities=22%  Similarity=0.341  Sum_probs=173.1

Q ss_pred             ecCCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceE
Q psy16044         10 FARDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWT   89 (436)
Q Consensus        10 ~~~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~   89 (436)
                      ....||.+         .++|.++.+++|||+|+|+...      .++|+||||+++||||||||+...    .....+.
T Consensus       216 ~~~~CG~~---------~~~g~~a~~~~~Pw~v~l~~~~------~~~CgGsLIs~~~VLTAAHC~~~~----~~~~~~~  276 (509)
T 2odp_A          216 TDTICGVG---------NMSANASDQERTPWHVTIKPKS------QETCRGALISDQWVLTAAHCFRDG----NDHSLWR  276 (509)
T ss_dssp             CSCCSSCC---------CCCTTSCHHHHCTTEEEEEC----------CEEEEECSSSEEEECGGGC------------CE
T ss_pred             CCcccCCc---------CCCCCccccCCCCcEEEEEeCC------CcEEEEEEEcCCEEEEcHHHcCCC----CCcceEE
Confidence            44679944         2578999999999999997532      688999999999999999999652    1235678


Q ss_pred             EEeccccCCccCCceEEEeeeEEEeCCCCCC-----------CCCceeEEEeCCCCCCCCCceeeeeecCCCC----CCC
Q psy16044         90 AVLGDWDRTEEEKSEVRIPVERIRVHEEFHN-----------YHHDIALLKLSRPTSARDKGVRAVCLTDADK----RPV  154 (436)
Q Consensus        90 v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~-----------~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~----~~~  154 (436)
                      |++|.++..    ..+.+.|+++++||+|+.           ..||||||||++|+. ++.+++|||||....    ...
T Consensus       277 V~~G~~~~~----~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~  351 (509)
T 2odp_A          277 VNVGDPKSQ----WGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVK-MSTHARPICLPCTMEANLALRR  351 (509)
T ss_dssp             EEECCTTCT----TCEEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEEESSCCC-CBTTBCCCBCTTBHHHHHHTTC
T ss_pred             EEeCCcccC----CCceeeeEEEEECCCCccccccccccccccCCCeEEEEECCccc-CCCCcccccCCCCcccchhhcc
Confidence            999987642    347789999999999973           479999999999999 788899999997421    123


Q ss_pred             CCCCcEEEEecCccCCCCCcc----ccceeeeeec---cchhhhhhhc-------CC----CcCCcCCeEEeccCCCCCC
Q psy16044        155 NPKQQCVATGWGRVKPKGDLV----SKLRQIRVPL---HNISVCRDKY-------GD----SVELHGGHLCGGQLDGFSG  216 (436)
Q Consensus       155 ~~~~~~~~~GwG~~~~~~~~~----~~l~~~~~~~---~~~~~C~~~~-------~~----~~~~~~~~~Ca~~~~~~~~  216 (436)
                      ..+..|++.|||.........    ...+...+.+   ++.+.|...+       ..    ....++.||||+. .++.+
T Consensus       352 ~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~-~~~~~  430 (509)
T 2odp_A          352 PQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGT-QEDES  430 (509)
T ss_dssp             CTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECC-TTCCC
T ss_pred             CCCCccccccccccccccceeeeecccCceeeEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCC-CCCCc
Confidence            457788889999765322111    1123445555   4789998853       21    1235679999986 34589


Q ss_pred             CccCCCCCeeeeEecCCcEEEEEEEeEcCC-CCCC------------C------cccccccceecCCccccCC
Q psy16044        217 ACIGDSGGPLQCSLKDGRWYLAGITSFGSG-YCGV------------G------IRYSHRQPRLINGKESIRG  270 (436)
Q Consensus       217 ~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~-~C~~------------~------~~y~~v~~~~~~~~~~~~~  270 (436)
                      +|+|||||||+|.. +++|+|+||+|||.. .|+.            +      .+|++|.+|..||.+.+..
T Consensus       431 ~C~GDSGGPL~~~~-~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~~~~~  502 (509)
T 2odp_A          431 PCKGESGGAVFLER-RFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHLGD  502 (509)
T ss_dssp             CCGGGTTCEEEEEE-TTEEEEEEEEEEESCCTTC-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHHHHTT
T ss_pred             ccCCCccCceEEEE-CCeEEEEEEEEEcCCCCCCCcccccccccCcccCCCCCCceeeeHHHHhHHHHHHhCC
Confidence            99999999999985 789999999999984 5752            1      4789999999999887753


No 91 
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=100.00  E-value=1.4e-39  Score=327.07  Aligned_cols=236  Identities=24%  Similarity=0.366  Sum_probs=179.8

Q ss_pred             ecCCCCCCccCCCCCCeEeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceE
Q psy16044         10 FARDCGVGIRYSHRQPRLINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWT   89 (436)
Q Consensus        10 ~~~~CG~~~~~~~~~~~i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~   89 (436)
                      ....||+...         .+..+..++|||+|+|++.....  ..++|+||||+++||||||||+....    ....+.
T Consensus       207 ~~~~CG~~~~---------~~~~~~~~~~Pw~v~l~~~~~~~--~~~~CgGsLIs~~~VLTAAHC~~~~~----~~~~~~  271 (497)
T 1rrk_A          207 SLSLCGMVWE---------HRKGTDYHKQPWQAKISVIRPSK--GHESCMGAVVSEYFVLTAAHCFTVDD----KEHSIK  271 (497)
T ss_dssp             GTTCTTCCCC---------CTTCCHHHHSTTEEEEEECC--C--CCEEEEEEECSSSEEEECGGGCCTTC----CGGGEE
T ss_pred             CcCCCCCCCC---------CCCCCCccccCcEEEEEEEcCCC--CCceeEEEEecCCEEEECHHhCCCCC----CceEEE
Confidence            3457995432         14567789999999998753222  26899999999999999999996531    245688


Q ss_pred             EEeccccCCccCCceEEEeeeEEEeCCCCCC-----------CCCceeEEEeCCCCCCCCCceeeeeecCCCC----CCC
Q psy16044         90 AVLGDWDRTEEEKSEVRIPVERIRVHEEFHN-----------YHHDIALLKLSRPTSARDKGVRAVCLTDADK----RPV  154 (436)
Q Consensus        90 v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~-----------~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~----~~~  154 (436)
                      |++|..        .+.+.|+++++||+|+.           ..||||||||++|+. ++.+++|||||....    ...
T Consensus       272 v~~G~~--------~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~  342 (497)
T 1rrk_A          272 VSVGGE--------KRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLK-YGQTIRPICLPCTEGTTRALRL  342 (497)
T ss_dssp             EEETTC--------SSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCC-CBTTBCCCBCTTBHHHHHHTTC
T ss_pred             EEeCCc--------cceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCCc-CCCCeeeeeCCCCCcccccccc
Confidence            999864        24578999999999973           479999999999999 788999999997421    124


Q ss_pred             CCCCcEEEEecCccCCCC-------Cccccceeeeeeccc---hhhhhhhc------CC----CcCCcCCeEEeccCCC-
Q psy16044        155 NPKQQCVATGWGRVKPKG-------DLVSKLRQIRVPLHN---ISVCRDKY------GD----SVELHGGHLCGGQLDG-  213 (436)
Q Consensus       155 ~~~~~~~~~GwG~~~~~~-------~~~~~l~~~~~~~~~---~~~C~~~~------~~----~~~~~~~~~Ca~~~~~-  213 (436)
                      ..+..|++.|||......       ..+..|++..+.+++   .+.|+..+      ..    ....++.||||+...+ 
T Consensus       343 ~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~  422 (497)
T 1rrk_A          343 PPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPY  422 (497)
T ss_dssp             CTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSS
T ss_pred             CCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCC
Confidence            467888889998764321       134678999999998   68998742      11    1235679999987653 


Q ss_pred             -CCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC-CCC-------CCc----ccccccceecCCccccCC
Q psy16044        214 -FSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-YCG-------VGI----RYSHRQPRLINGKESIRG  270 (436)
Q Consensus       214 -~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~-~C~-------~~~----~y~~v~~~~~~~~~~~~~  270 (436)
                       ..++|+|||||||+|.. +++|+|+||+|||.. .|+       .+.    +|++|.+|..||.+.+..
T Consensus       423 ~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~~  491 (497)
T 1rrk_A          423 ADPNTCRGDSGGPLIVHK-RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQD  491 (497)
T ss_dssp             CCCCCCGGGTTCEEEEEE-TTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTT
T ss_pred             CCCcCCCCCCCCeeEEEe-CCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHHHHHHHHHHHhCc
Confidence             46899999999999974 789999999999984 477       233    789999999999887754


No 92 
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=100.00  E-value=1.3e-36  Score=319.94  Aligned_cols=227  Identities=23%  Similarity=0.363  Sum_probs=172.7

Q ss_pred             CCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEe
Q psy16044         29 NGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIP  108 (436)
Q Consensus        29 ~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~  108 (436)
                      .|..+..++|||+|+|.......  ..++|+||||+++||||||||+...    .....+.|++|...        +.+.
T Consensus       459 ~~~~~~~~~~Pw~~~v~~~~~~~--~~~~CgGsLIs~~~VLTAAHC~~~~----~~~~~~~V~~G~~~--------~~~~  524 (741)
T 3hrz_D          459 HRKGTDYHKQPWQAKISVIRPSK--GHESCMGAVVSEYFVLTAAHCFTVD----DKEHSIKVSVGGEK--------RDLE  524 (741)
T ss_dssp             C---CCTTTCTTEEEEEECCCC-------EEEEECSSSEEEECGGGCC---------CCEEEEETTCS--------CCEE
T ss_pred             cCCcccccCcCCeEEEEEEeCCC--CCCEEEEEEecCCEEEEchhhcccc----CCcceEEEEeCCCc--------eEEE
Confidence            48899999999999987752221  2689999999999999999998653    13456889999543        4578


Q ss_pred             eeEEEeCCCCCC-----------CCCceeEEEeCCCCCCCCCceeeeeecCCC----CCCCCCCCcEEEEecCccCCCC-
Q psy16044        109 VERIRVHEEFHN-----------YHHDIALLKLSRPTSARDKGVRAVCLTDAD----KRPVNPKQQCVATGWGRVKPKG-  172 (436)
Q Consensus       109 v~~i~~hp~y~~-----------~~~DiAll~L~~~~~~~~~~v~pi~l~~~~----~~~~~~~~~~~~~GwG~~~~~~-  172 (436)
                      |+++++||+|+.           ..||||||||++|+. ++.+++|||||...    ......+..|.+.|||.+.... 
T Consensus       525 v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv~-~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~  603 (741)
T 3hrz_D          525 IEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLK-YGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDI  603 (741)
T ss_dssp             EEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCCC-CCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEE
T ss_pred             EEEEEECCCCCcccccccccCCccCCcEEEEEECCcCc-CCCCccccccCCcccccchhccCCCCccccccccccccccc
Confidence            999999999973           478999999999999 78889999999642    1234567889999999876443 


Q ss_pred             ------Cccccceeeeeeccc---hhhhhhhcC------C----CcCCcCCeEEeccCCC--CCCCccCCCCCeeeeEec
Q psy16044        173 ------DLVSKLRQIRVPLHN---ISVCRDKYG------D----SVELHGGHLCGGQLDG--FSGACIGDSGGPLQCSLK  231 (436)
Q Consensus       173 ------~~~~~l~~~~~~~~~---~~~C~~~~~------~----~~~~~~~~~Ca~~~~~--~~~~C~gDsGgPl~~~~~  231 (436)
                            .....|+...+.+++   ...|...+.      .    ....++.||||+...+  ..++|+|||||||++.. 
T Consensus       604 ~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~-  682 (741)
T 3hrz_D          604 KALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHK-  682 (741)
T ss_dssp             EEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEE-
T ss_pred             cceeccccccccccceeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEee-
Confidence                  125668899999988   789988432      1    1246789999987653  47899999999999985 


Q ss_pred             CCcEEEEEEEeEcC-CCCCC------C-----cccccccceecCCccccCCC
Q psy16044        232 DGRWYLAGITSFGS-GYCGV------G-----IRYSHRQPRLINGKESIRGA  271 (436)
Q Consensus       232 ~~~~~l~GI~S~g~-~~C~~------~-----~~y~~v~~~~~~~~~~~~~~  271 (436)
                      +++|+|+||+|||. ..|+.      +     .+|++|..+..||.+.+...
T Consensus       683 ~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~~  734 (741)
T 3hrz_D          683 RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE  734 (741)
T ss_dssp             TTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTTTS
T ss_pred             CCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhcCC
Confidence            78999999999997 34765      3     68999999999999888764


No 93 
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=100.00  E-value=5e-36  Score=267.38  Aligned_cols=202  Identities=13%  Similarity=0.082  Sum_probs=154.9

Q ss_pred             CCCeEeCCcccCCCCCcc--eEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCcc
Q psy16044         23 RQPRLINGKESIRGAWPW--QVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEE  100 (436)
Q Consensus        23 ~~~~i~~G~~a~~~~~Pw--~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~  100 (436)
                      ...||++|.+     +||  ++.+.  .   +  .++|+||||+++||||||||+.+.... .....+.|++|..+....
T Consensus         7 ~~~rI~~g~~-----~P~~~~~~~~--~---~--~~~CgGtLIs~~~VLTAAHCv~~~~~~-~~~~~~~v~~G~~~~~~~   73 (215)
T 1p3c_A            7 GRTKVANTRV-----APYNSIAYIT--F---G--GSSCTGTLIAPNKILTNGHCVYNTASR-SYSAKGSVYPGMNDSTAV   73 (215)
T ss_dssp             CCEECSCTTS-----TTGGGEEEEE--C---S--SCEEEEEEEETTEEEECHHHHEETTTT-EECCCCEEEETCBTTBCT
T ss_pred             CCEEecCCCc-----CCCeEEEEEE--c---C--CceEEEEEEeCCEEEECccEeccCCCC-ccccceEEEEcccCCCCC
Confidence            4568888875     688  34443  1   1  689999999999999999999653110 111234899998876543


Q ss_pred             CCceEEEeeeEEEeCCCCC---CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCcccc
Q psy16044        101 EKSEVRIPVERIRVHEEFH---NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSK  177 (436)
Q Consensus       101 ~~~~~~~~v~~i~~hp~y~---~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~  177 (436)
                      .   +.+.|+++++||+|+   ...+|||||||++|+   +..++|+|||...   ...+..++++|||.+.. ...+..
T Consensus        74 ~---~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~~---~~~v~pi~l~~~~---~~~g~~~~~~Gwg~~~~-~~~~~~  143 (215)
T 1p3c_A           74 N---GSANMTEFYVPSGYINTGASQYDFAVIKTDTNI---GNTVGYRSIRQVT---NLTGTTIKISGYPGDKM-RSTGKV  143 (215)
T ss_dssp             T---CCEEEEEEECCHHHHHHCCGGGCCEEEEESSCH---HHHHCCCCBCCCS---CCTTCEEEEEECCHHHH-HHHSSC
T ss_pred             C---CeEEEEEEEeCCccccCCCcccCEEEEEECCCC---cccceeeecCCCc---ccCCCeEEEecCCCCCc-ccccce
Confidence            2   357899999999993   568999999999974   4679999999853   25789999999997653 233466


Q ss_pred             ceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccc
Q psy16044        178 LRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHR  257 (436)
Q Consensus       178 l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v  257 (436)
                      |++..+.+++.+.|...+.                 ..++|.|||||||++.  ++  +|+||+|||.+|+..+.+|++|
T Consensus       144 l~~~~~~~~~~~~c~~~~~-----------------~~~~C~GDSGgPl~~~--~g--~lvGi~S~g~~c~~~p~v~t~v  202 (215)
T 1p3c_A          144 SQWEMSGSVTREDTNLAYY-----------------TIDTFSGNSGSAMLDQ--NQ--QIVGVHNAGYSNGTINGGPKAT  202 (215)
T ss_dssp             CCEEEEEECCEECSSEEEE-----------------CCCCCTTCTTCEEECT--TS--CEEEECCEEEGGGTEEEEEBCC
T ss_pred             echhccCccCcccchheee-----------------ccccCCCCCCCeeEcc--CC--eEEEEEecccCCCccCceeEec
Confidence            8899999999999976541                 2689999999999984  33  7999999998854556799999


Q ss_pred             cceecCCcccc
Q psy16044        258 QPRLINGKESI  268 (436)
Q Consensus       258 ~~~~~~~~~~~  268 (436)
                      .++..||.+..
T Consensus       203 ~~~~~WI~~~~  213 (215)
T 1p3c_A          203 AAFVEFINYAK  213 (215)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hHHHHHHHHHh
Confidence            99999998754


No 94 
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=99.98  E-value=1.9e-32  Score=229.87  Aligned_cols=144  Identities=34%  Similarity=0.702  Sum_probs=125.7

Q ss_pred             cccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC---CccccceEEEEEeeCcccccccc
Q psy16044        278 ITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG---DLVSKLRQIRVPLHNISVCRDKY  354 (436)
Q Consensus       278 ~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~---~~~~~l~~~~~~~~~~~~C~~~~  354 (436)
                      .+..||||||||++|+.++.. |+|||||....   ..++.|+++|||.+....   ..+..|+++.+++++.++|++.+
T Consensus         4 ~~~~nDIALl~L~~~v~~~~~-v~picLp~~~~---~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~   79 (152)
T 2pka_B            4 KDYSHDLMLLRLQSPAKITDA-VKVLELPTQEP---ELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAH   79 (152)
T ss_dssp             SBCTTCCEEEEESSCCCCCSS-CCCCCCCSSCC---CTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHC
T ss_pred             CCCCCCEEEEEECCCCcCCCC-EEeEECCCCCC---CCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhh
Confidence            456799999999999999988 99999997654   468999999999887654   45788999999999999999987


Q ss_pred             CCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccHHHHHHHHhhh
Q psy16044        355 GDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       355 ~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      ..  .++++|||++...+..+.|.|||||||++.   +  +|+||+||| ..|+..+.|++||||+.|++||+++|+.+
T Consensus        80 ~~--~~~~~~iCa~~~~~~~~~C~GDsGgPL~~~---g--~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~~  151 (152)
T 2pka_B           80 PD--KVTESMLCAGYLPGGKDTCMGDSGGPLICN---G--MWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTITEN  151 (152)
T ss_dssp             SS--BCCTTEEEEECTTSSCBCCTTCTTCEEEET---T--EEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHHHC
T ss_pred             cC--CCCCCEEeeccCCCCCcccCCccccceEEC---C--EEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhccC
Confidence            64  468999999876556789999999999995   3  499999999 78987778999999999999999999753


No 95 
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.98  E-value=5.4e-32  Score=244.16  Aligned_cols=158  Identities=34%  Similarity=0.585  Sum_probs=138.3

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....+|||||||++|+.++.. ++|||||.... ....++.|.++|||.+......+..|+++.+++++.++|
T Consensus        74 ~hp~y~~~~~~~DIALl~L~~~~~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  151 (232)
T 2oq5_A           74 VHEKYKHPSHDYDISLAELSSPVPYTNA-VHRVCLPDASY-EFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTC  151 (232)
T ss_dssp             ECTTCCTTCCTTCCEEEEESSCCCCCSS-SCCCBCCCTTC-CCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHH
T ss_pred             eCCCCCCCCCCCCEEEEEecCCCccCCc-eeEeECCCccc-cCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHc
Confidence            5899998889999999999999999988 99999997654 345789999999998876655678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+.....+.++|||++...+..+.|.|||||||++...+++|+|+||+|||.+|+..+.|++||||+.|++||+++++
T Consensus       152 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~  231 (232)
T 2oq5_A          152 NEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKTG  231 (232)
T ss_dssp             TSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHHHC
T ss_pred             CCccccCCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHHhC
Confidence            88643333578899999876666789999999999998667899999999999999877789999999999999999875


No 96 
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=99.98  E-value=6.9e-32  Score=220.54  Aligned_cols=128  Identities=38%  Similarity=0.723  Sum_probs=109.2

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||++|.+++|||+|+|+...     ..++|+||||+++||||||||+..        ..+.|++|..+........+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~-----~~~~CgGsLIs~~~VLTAAHC~~~--------~~~~v~~G~~~~~~~~~~~~~   67 (131)
T 1yph_C            1 IVNGEEAVPGSWPWQVSLQDKT-----GFHFCGGSLINENWVVTAAHCGVT--------TSDVVVAGEFDQGSSSEKIQK   67 (131)
T ss_dssp             CBTCEECCTTSSTTEEEEECTT-----SCEEEEEEEEETTEEEECGGGCCC--------TTSEEEESCSBTTCSSSCCEE
T ss_pred             CCCCEECCCCCcCcEEEEEeCC-----CCEEEEEEEeeCCEEEECHHHCCC--------CCeEEEEeEccCCCCCCceEE
Confidence            6899999999999999998632     168999999999999999999854        346899999887655556688


Q ss_pred             EeeeEEEeCCCCC--CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccC
Q psy16044        107 IPVERIRVHEEFH--NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVK  169 (436)
Q Consensus       107 ~~v~~i~~hp~y~--~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~  169 (436)
                      +.|+++++||+|+  ...||||||||++|+. ++.+++|||||.... ....+..|+++|||.+.
T Consensus        68 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~-~~~~v~picLp~~~~-~~~~g~~~~v~GWG~t~  130 (131)
T 1yph_C           68 LKIAKVFKNSKYNSLTINNDITLLKLSTAAS-FSQTVSAVCLPSASD-DFAAGTTCVTTGWGLTR  130 (131)
T ss_dssp             EEEEEEEECTTCCTTTCCSCCEEEEESSCCC-CBTTBCCCBCCCTTC-CCCTTCEEEEEESCCSC
T ss_pred             EEEEEEEeCCCCCCCCCCCCEEEEEECCccc-CCCcCcceECCCccc-CCCCCCEEEEEcCCccC
Confidence            8999999999998  4689999999999999 778899999998643 34578999999999764


No 97 
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.98  E-value=6.7e-32  Score=251.24  Aligned_cols=161  Identities=29%  Similarity=0.551  Sum_probs=138.1

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC-ccccceEEEEEeeCccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKLRQIRVPLHNISV  349 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~-~~~~l~~~~~~~~~~~~  349 (436)
                      .||.|+.....||||||||++|+.++.. |+|||||.........+..|+++|||.+..... .+..|+++.+++++.++
T Consensus        89 ~Hp~y~~~~~~nDIALl~L~~~v~~~~~-v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~  167 (290)
T 1fiw_A           89 IHEKYSASSEANDIALMKITPPVTCGHF-IGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGL  167 (290)
T ss_dssp             ECTTCBTTTTBTCCEEEEEESCCCCBTT-BCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHH
T ss_pred             ECCCCCCCCCCCCEEEEEECCccccCCc-cccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHH
Confidence            5999999899999999999999999988 999999976553445689999999998765443 45689999999999999


Q ss_pred             cccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEec-CCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHH
Q psy16044        350 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLK-DGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       350 C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~-~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      |+........+.+.|||++...+..+.|.|||||||+|... +++|+|+||+|||.+|+..+.|++||||++|++||+++
T Consensus       168 C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~  247 (290)
T 1fiw_A          168 CNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASK  247 (290)
T ss_dssp             HTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHHHHH
T ss_pred             hccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence            98753222247899999987666679999999999999863 68999999999999998777899999999999999999


Q ss_pred             Hhhh
Q psy16044        429 INIA  432 (436)
Q Consensus       429 i~~~  432 (436)
                      |+..
T Consensus       248 ~~~~  251 (290)
T 1fiw_A          248 IGST  251 (290)
T ss_dssp             HCHH
T ss_pred             hCcc
Confidence            9754


No 98 
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.98  E-value=8.5e-32  Score=244.44  Aligned_cols=156  Identities=32%  Similarity=0.589  Sum_probs=140.5

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....+|||||||++|+.++.. ++|||||.... ..+.+..|+++|||.+......+..|+++.+++++.++|
T Consensus        85 ~hp~y~~~~~~~DIALl~L~~~~~~~~~-v~piclp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C  162 (241)
T 3ncl_A           85 SHPFFNDFTFDYDIALLELEKPAEYSSM-VRPISLPDASH-VFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTC  162 (241)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCCSS-CCCCBCCCTTC-CCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHH
T ss_pred             ECCCCCCCCCCCcEEEEEECCCCcccCc-cCceEcCCccc-CCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHh
Confidence            4899998888999999999999999988 99999998765 455789999999999876666678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+..  .+++.|||++...+..+.|.|||||||++...+++|+|+||+|||.+|+..+.|++||||++|++||+++++
T Consensus       163 ~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~~~  240 (241)
T 3ncl_A          163 ENLLPQ--QITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENTG  240 (241)
T ss_dssp             HHHSTT--TCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHHHC
T ss_pred             hhhccc--CCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHhC
Confidence            998865  578999999876666799999999999998778899999999999999887889999999999999999875


No 99 
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.97  E-value=1e-31  Score=243.01  Aligned_cols=156  Identities=30%  Similarity=0.626  Sum_probs=139.3

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||+|++|+.++.. ++|||||.... ....+..|.++|||.+......+..|+++.+++++.++|
T Consensus        80 ~hp~y~~~~~~~DiALl~L~~~~~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  157 (235)
T 4dgj_A           80 INPHYNRRRKDNDIAMMHLEFKVNYTDY-IQPISLPEENQ-VFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERC  157 (235)
T ss_dssp             ECTTCBTTTTBTCCEEEEESSCCCCBTT-BCCCBCCCTTC-CCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHH
T ss_pred             ECCCCCCCCCCCeEEEEEECCccccCCc-ccccCCCCccc-CCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHh
Confidence            4899999899999999999999999988 99999998765 456789999999998876666678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+... .++++|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++||+++|+
T Consensus       158 ~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~i~  235 (235)
T 4dgj_A          158 QQQMPEY-NITENMICAGYEEGGIDSCQGDSGGPLMCQE-NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSFLH  235 (235)
T ss_dssp             HHHCTTS-CCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHTTCC
T ss_pred             hhhccCc-cCCCCeEeecCCCCCCccCCCCCCCeEEEEE-CCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHHHhC
Confidence            9987543 4789999998766667999999999999985 7899999999999999987889999999999999998764


No 100
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.97  E-value=8.1e-32  Score=243.92  Aligned_cols=157  Identities=32%  Similarity=0.610  Sum_probs=138.5

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....+|||||||++|+.++.. ++|||||.... ....+..|+++|||.+......+..|+++.+++++.++|
T Consensus        81 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  158 (238)
T 3bg8_A           81 IHDQYKMAESGYDIALLKLETTVNYTDS-QRPISLPSKGE-RNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEEC  158 (238)
T ss_dssp             ECTTCCCGGGSCCCEEEEESSCCCCBTT-BCCCBCCCGGG-GSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHH
T ss_pred             ECCCCCCCCCCCcEEEEEECCccccCCC-cccCCCCCCcc-CcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHh
Confidence            5899998889999999999999999988 99999997654 345788999999998876655678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+... .+++.|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||++|++||+++|+
T Consensus       159 ~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~  236 (238)
T 3bg8_A          159 QKRYRGH-KITHKMICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ  236 (238)
T ss_dssp             HHHCTTS-CCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred             hhhhcCC-CCCCCeEeecCCCCCCCcCCCCCCcceEEEE-CCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence            9887543 3689999998766667899999999999985 7899999999999999887889999999999999999986


Q ss_pred             h
Q psy16044        431 I  431 (436)
Q Consensus       431 ~  431 (436)
                      .
T Consensus       237 ~  237 (238)
T 3bg8_A          237 A  237 (238)
T ss_dssp             C
T ss_pred             c
Confidence            4


No 101
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.97  E-value=2.4e-31  Score=241.38  Aligned_cols=158  Identities=33%  Similarity=0.653  Sum_probs=139.6

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....+|||||+|++|+.++.. ++|||||.... ....+..|+++|||.+......+..|+++.+++++.++|
T Consensus        81 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  158 (241)
T 2any_A           81 IHQNYKVSEGNHDIALIKLQAPLEYTEF-QKPISLPSKGD-TSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEEC  158 (241)
T ss_dssp             ECTTCCTTSSSSCCEEEEESSCCCCBTT-BCCCCCCCSSC-CSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHH
T ss_pred             ECCCCCCCCCCCCeEEEEeCCcccCCCC-cceeEcCCccc-CCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHh
Confidence            5899998888999999999999999988 99999997765 456789999999998876655678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+... .+++.|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||++|++||+++|+
T Consensus       159 ~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~  236 (241)
T 2any_A          159 QKRYQDY-KITQRMVCAGYKEGGKDACKGDSGGPLVCKH-NGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQ  236 (241)
T ss_dssp             HTTSCTT-CSCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred             hhHhccC-CCCcCcEeecCCCCCCccCCCCCCCcEEEEE-CCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence            9887543 3689999998766667899999999999985 7899999999999999877789999999999999999997


Q ss_pred             hh
Q psy16044        431 IA  432 (436)
Q Consensus       431 ~~  432 (436)
                      ..
T Consensus       237 ~~  238 (241)
T 2any_A          237 SS  238 (241)
T ss_dssp             CC
T ss_pred             cc
Confidence            53


No 102
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.97  E-value=1.3e-31  Score=242.35  Aligned_cols=153  Identities=35%  Similarity=0.657  Sum_probs=135.8

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||||++|+.++.. |+|||||....   ..+..|+++|||.+......+..|+++.+++++.++|
T Consensus        84 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~---~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  159 (237)
T 2f91_A           84 LHENFDYNLLDNDISLLKLSGSLTFNDN-VAPIALPEQGH---TATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDC  159 (237)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTT-BCCCBCCCTTC---CCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHH
T ss_pred             ECCCCCCCCCCCcEEEEEECCCcccCCc-eeeccCCCCCC---CCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHh
Confidence            5899998889999999999999999988 99999997654   5788999999998876666678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      +..+.. ..+.+.|||++...+..+.|.|||||||++. .+++|+|+||+|||.+|+..+.|++||||++|++||+++|
T Consensus       160 ~~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~-~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~  236 (237)
T 2f91_A          160 RADYGA-DEILDSMICAGVPEGGKDSCQGDSGGPLAAS-DTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANA  236 (237)
T ss_dssp             HHHHCT-TTSCTTEEEECCTTCCCBCCTTCTTCEEEEC-TTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred             hhhhCC-CCcCCCeEEEecCCCCCCCCCCcCCCCeEEe-cCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHHhc
Confidence            988752 2468899999876666799999999999997 4789999999999999988788999999999999999876


No 103
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.97  E-value=3.1e-31  Score=245.82  Aligned_cols=156  Identities=29%  Similarity=0.639  Sum_probs=135.2

Q ss_pred             CCCccccccc--ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITS--FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~--~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+....  .||||||||++|+.++.. |+|||||.... ....++.|+++|||.+..+ ..+..|+++.+++++.+
T Consensus       119 ~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~-v~picLp~~~~-~~~~g~~~~v~GWG~t~~~-~~~~~l~~~~~~i~~~~  195 (278)
T 2olg_A          119 QHPDYVDGSKDRYHDIALIRLNRQVEFTNY-IRPVCLPQPNE-EVQVGQRLTVVGWGRTETG-QYSTIKQKLAVPVVHAE  195 (278)
T ss_dssp             ECTTCCTTCSSCTTCCEEEEESSCCCCCSS-CCCCBCCCTTC-CCCTTCEEEEEESCCSSSC-CCCSBCEEEEEEBCCGG
T ss_pred             ECCCCcCCCCCCCCeEEEEEECCCCcCCCC-cCccCcCCCCC-CcCCCCEEEEEcCCcCCCC-CccchhhcccccccCHH
Confidence            4899987654  799999999999999988 99999998765 4567899999999988643 35778999999999999


Q ss_pred             ccccccCCC-ccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHH
Q psy16044        349 VCRDKYGDS-VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       349 ~C~~~~~~~-~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~  427 (436)
                      +|++.+... ..++++|||++... +.+.|+|||||||++...+++|+|+||+|||.+|+..+.|++||||+.|++||++
T Consensus       196 ~C~~~~~~~~~~~~~~~~Ca~~~~-~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~  274 (278)
T 2olg_A          196 QCAKTFGAAGVRVRSSQLCAGGEK-AKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIEG  274 (278)
T ss_dssp             GGGGGGSSTTCCCCTTEEEECCTT-CTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGGGGHHHHHT
T ss_pred             HHHHHhccccccCCCceEeeecCC-CCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHHHHHHHHHH
Confidence            999887542 24789999998654 4689999999999998657899999999999999887789999999999999999


Q ss_pred             HHh
Q psy16044        428 QIN  430 (436)
Q Consensus       428 ~i~  430 (436)
                      +|+
T Consensus       275 ~i~  277 (278)
T 2olg_A          275 NIR  277 (278)
T ss_dssp             TCC
T ss_pred             hhC
Confidence            875


No 104
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.97  E-value=3.1e-31  Score=240.25  Aligned_cols=157  Identities=27%  Similarity=0.520  Sum_probs=136.8

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCc-cccceEEEEEeeCccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDL-VSKLRQIRVPLHNISV  349 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~-~~~l~~~~~~~~~~~~  349 (436)
                      .||.|+.....+|||||||++|+.++.. ++|||||.....  ..+..|.++|||.+...... +..|+++.+++++.++
T Consensus        79 ~hp~y~~~~~~~DIALl~L~~~~~~~~~-v~picLp~~~~~--~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~  155 (238)
T 1ym0_A           79 VNENYDPATLENDVSVIKTAVAITFDIN-VGPICAPDPAND--YVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAF  155 (238)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCSSS-CCCCBCCCTTCC--CTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHH
T ss_pred             ECCCCCCCCCcccEEEEEeCCCccccCc-ccccCCCCCcCC--CCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHH
Confidence            4899998889999999999999999987 999999976652  27889999999988765443 7789999999999999


Q ss_pred             cccccCCCccCCCCceecccCCCC--CCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHH
Q psy16044        350 CRDKYGDSVELHGGHLCGGQLDGF--SGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       350 C~~~~~~~~~~~~~~~C~~~~~~~--~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~  427 (436)
                      |+..+... .+.+.|||++...+.  .+.|.|||||||++...+++|+|+||+|||.+|+ .+.|++||||+.|++||++
T Consensus       156 C~~~~~~~-~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~-~~~p~vyt~v~~~~~WI~~  233 (238)
T 1ym0_A          156 CDAVYTSD-TIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCA-SGYPGVYSRVGFHAGWITD  233 (238)
T ss_dssp             HHHHCTTS-CCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSS-SSSCEEEEEHHHHHHHHHH
T ss_pred             HhHhhccc-ccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCC-CCCCcEEEEHHHhHHHHHH
Confidence            99887543 468999999876544  6899999999999986578999999999999998 5779999999999999999


Q ss_pred             HHhhh
Q psy16044        428 QINIA  432 (436)
Q Consensus       428 ~i~~~  432 (436)
                      +|+++
T Consensus       234 ~i~~n  238 (238)
T 1ym0_A          234 TITNN  238 (238)
T ss_dssp             HHHCC
T ss_pred             HhcCC
Confidence            99753


No 105
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.97  E-value=6.7e-31  Score=252.75  Aligned_cols=162  Identities=33%  Similarity=0.575  Sum_probs=138.6

Q ss_pred             CCCcc------cccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEe
Q psy16044        271 AWPWQ------NLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPL  344 (436)
Q Consensus       271 ~~p~~------~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~  344 (436)
                      .||.|      +.....||||||||++|+.++.. |+|||||.... ....++.|+++|||.+......+..|+++.+++
T Consensus       194 ~Hp~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~-v~PicLp~~~~-~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~i  271 (372)
T 1z8g_A          194 YHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEY-IQPVCLPAAGQ-ALVDGKICTVTGWGNTQYYGQQAGVLQEARVPI  271 (372)
T ss_dssp             EETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSS-CCCCBCCCTTC-CCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEE
T ss_pred             ECCCccccccCCCCCCCccEEEEEECCCCCCCCc-eeccccCCccc-CCCCCCEEEEEecCCCCCCCCCCceeeEEEEEe
Confidence            48888      56678899999999999999988 99999997654 446789999999999876656678999999999


Q ss_pred             eCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEec---CCcEEEEEEEEecCCCCCCCCCeEEEeCccc
Q psy16044        345 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLK---DGRWYLAGITSFGSGCAKSGYPDVYTKLSFY  421 (436)
Q Consensus       345 ~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~---~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~  421 (436)
                      ++.++|+........++++|||++...+..+.|+|||||||++...   +++|+|+||+|||.+|+..+.|++||||+.|
T Consensus       272 i~~~~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y  351 (372)
T 1z8g_A          272 ISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDF  351 (372)
T ss_dssp             ECHHHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGG
T ss_pred             cChHHhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHH
Confidence            9999998742212247899999987666679999999999999863   3899999999999999887889999999999


Q ss_pred             HHHHHHHHhhhhh
Q psy16044        422 LPWIRKQINIAVD  434 (436)
Q Consensus       422 ~~WI~~~i~~~~~  434 (436)
                      ++||+++|+...+
T Consensus       352 ~~WI~~~i~~~~~  364 (372)
T 1z8g_A          352 REWIFQAIKTHSE  364 (372)
T ss_dssp             HHHHHHHHHHTTT
T ss_pred             HHHHHHHHhccCC
Confidence            9999999986543


No 106
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.97  E-value=1.2e-30  Score=238.55  Aligned_cols=157  Identities=34%  Similarity=0.537  Sum_probs=134.7

Q ss_pred             CCCcccccccccccceeecccc----cccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC-CccccceEEEEEee
Q psy16044        271 AWPWQNLITSFLSAALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRVPLH  345 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~----~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~-~~~~~l~~~~~~~~  345 (436)
                      .||.|+.....||||||+|++|    +.++.. |+|||||.... ....+..|.++|||.+.... ..+..|+++.++++
T Consensus        84 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~  161 (252)
T 1rtf_B           84 VHKEFDDDTYDNDIALLQLKSDSSRCAQESSV-VRTVCLPPADL-QLPDWTECELSGYGKHEALSPFYSERLKEAHVRLY  161 (252)
T ss_dssp             ECTTCCTTTCTTCCEEEEECCSSSCCSCCBTT-BCCCBCCCTTC-CCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEC
T ss_pred             eCCCCCcCCCCCCEEEEEECCccccccccCCc-eeceeCCCccc-cCCCCCEEEEEEcCCCCCCCccccchheEeeeEEe
Confidence            5899998889999999999999    888887 99999997654 45578899999999876543 24678999999999


Q ss_pred             CccccccccCCCccCCCCceecccCCCC------CCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCc
Q psy16044        346 NISVCRDKYGDSVELHGGHLCGGQLDGF------SGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLS  419 (436)
Q Consensus       346 ~~~~C~~~~~~~~~~~~~~~C~~~~~~~------~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~  419 (436)
                      +.++|+..+.....+.++|||++...+.      .+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+
T Consensus       162 ~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~  240 (252)
T 1rtf_B          162 PSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLN-DGRMTLVGIISWGLGCGQKDVPGVYTKVT  240 (252)
T ss_dssp             CGGGSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGG
T ss_pred             cHHHhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEe-CCcEEEEEEEEEcCCCCCCCCCeEEEEHH
Confidence            9999998764333578999999865543      6899999999999985 78999999999999998777899999999


Q ss_pred             ccHHHHHHHHh
Q psy16044        420 FYLPWIRKQIN  430 (436)
Q Consensus       420 ~~~~WI~~~i~  430 (436)
                      .|++||+++|+
T Consensus       241 ~y~~WI~~~~~  251 (252)
T 1rtf_B          241 NYLDWIRDNMR  251 (252)
T ss_dssp             GGHHHHHHHCC
T ss_pred             HHHHHHHHhcC
Confidence            99999999885


No 107
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.97  E-value=3.6e-31  Score=240.78  Aligned_cols=157  Identities=34%  Similarity=0.722  Sum_probs=134.1

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCc--cccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDL--VSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~--~~~l~~~~~~~~~~~  348 (436)
                      .||.|+.....||||||||++|+.++.. ++|||||.... ....+..|+++|||.+......  +..|+++.+++++.+
T Consensus        79 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~  156 (245)
T 2f9n_A           79 VHPQFYIIQTGADIALLELEEPVNISSR-VHTVMLPPASE-TFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENH  156 (245)
T ss_dssp             ECTTCCSSCCTTCCEEEEESSCCCCCSS-SCCCBCCCTTC-CCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHH
T ss_pred             ECCCccCCCCCCcEEEEEeCCCCcCCCC-ccccCCCCccc-CCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHH
Confidence            5999998889999999999999999988 99999997654 4567899999999987654332  347999999999999


Q ss_pred             ccccccCCC-------ccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCccc
Q psy16044        349 VCRDKYGDS-------VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFY  421 (436)
Q Consensus       349 ~C~~~~~~~-------~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~  421 (436)
                      +|+..+...       ..++++|||++.  ...+.|.|||||||+|.. +++|+|+||+|||.+|+..+.|++||||+.|
T Consensus       157 ~C~~~~~~~~~~~~~~~~~~~~~~Ca~~--~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y  233 (245)
T 2f9n_A          157 ICDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSCQGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQPNRPGIYTRVTYY  233 (245)
T ss_dssp             HHHHHHHTTCCSCTTSCCSCTTEEEECC--SSSBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEEEGGGG
T ss_pred             HhhhhhcccccccccccccccccEeecC--CCCCcCCCCCCCceEEEE-CCEEEEEEEEEeCCCCCCCCCCeEEEEHHHH
Confidence            998876321       246889999974  346899999999999985 7899999999999999877789999999999


Q ss_pred             HHHHHHHHhhh
Q psy16044        422 LPWIRKQINIA  432 (436)
Q Consensus       422 ~~WI~~~i~~~  432 (436)
                      ++||+++|+++
T Consensus       234 ~~WI~~~~~~~  244 (245)
T 2f9n_A          234 LDWIHHYVPKK  244 (245)
T ss_dssp             HHHHHHHSCC-
T ss_pred             HHHHHHHhhcC
Confidence            99999998754


No 108
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.97  E-value=7.2e-31  Score=239.56  Aligned_cols=156  Identities=32%  Similarity=0.649  Sum_probs=135.4

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||+|++|+.++.. |+|||||.... ..+.+..|+++|||.+..+...+..|+++.+++++.++|
T Consensus        93 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  170 (251)
T 1pyt_D           93 VHEKWNSFLVRNDIALIKLAETVELGDT-IQVACLPSEGS-LLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATC  170 (251)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCCCSS-CCCCBCCCTTC-CCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHH
T ss_pred             ECCCCCCCCCCCCEEEEEECCCcccCCC-eeeeEcCCCcc-cCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHc
Confidence            5999998889999999999999999988 99999998765 345688999999999876655677899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC--CCCCCCCCeEEEeCcccHHHHHHH
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS--GCAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~--~c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      +..+.....+++.|||++. .+..+.|.|||||||++.. +++|+|+||+|||.  .|+..+.|++||||+.|++||+++
T Consensus       171 ~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~  248 (251)
T 1pyt_D          171 SQRDWWGTTVKETMVCAGG-DGVISACNGDSGGPLNCQA-DGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQK  248 (251)
T ss_dssp             TSTTTTTTTCCTTEEEECC-SCSSCCCCSCTTCEEEEES-SSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHH
T ss_pred             chhhccCCCcCCCeEEecC-CCCCccCCCCCCCceEEEE-CCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence            8865322357899999986 4446899999999999985 78999999999996  688767899999999999999998


Q ss_pred             Hh
Q psy16044        429 IN  430 (436)
Q Consensus       429 i~  430 (436)
                      |+
T Consensus       249 ~~  250 (251)
T 1pyt_D          249 LQ  250 (251)
T ss_dssp             TT
T ss_pred             hc
Confidence            85


No 109
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.97  E-value=4.2e-31  Score=239.71  Aligned_cols=158  Identities=27%  Similarity=0.545  Sum_probs=136.6

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCC--CCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKR--PVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~--~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+.....||||||+|++|+.++.. |+|||||.....  ....+..|.++|||.+......+..|+++.+++++.+
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~  154 (241)
T 2jkh_A           76 KHNRFTKETYDFDIAVLRLKTPITFRMN-VAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRN  154 (241)
T ss_dssp             ECTTCBTTTTBTCCEEEEESSCCCCBTT-BCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHH
T ss_pred             eCCCCCCCCCCCcEEEEEECCcccCCCC-EeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHH
Confidence            4999998889999999999999999988 999999975421  1346789999999988765556788999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      +|+..+..  .++++|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++||+++
T Consensus       155 ~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~  231 (241)
T 2jkh_A          155 SCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF-KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRS  231 (241)
T ss_dssp             HHHHHCSS--CCCTTEEEESCSSSSCBCCTTTTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred             HhcccccC--cCCCCeEEeeCCCCCCccCcCcCCCeeEEEE-CCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHH
Confidence            99987654  4789999998765557899999999999985 78999999999999998777899999999999999999


Q ss_pred             Hhhh
Q psy16044        429 INIA  432 (436)
Q Consensus       429 i~~~  432 (436)
                      |+..
T Consensus       232 ~~~~  235 (241)
T 2jkh_A          232 MKTR  235 (241)
T ss_dssp             TC--
T ss_pred             hccc
Confidence            9754


No 110
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.97  E-value=1.2e-30  Score=236.62  Aligned_cols=157  Identities=31%  Similarity=0.618  Sum_probs=134.9

Q ss_pred             CCCccccccc--ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITS--FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~--~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+....  .+|||||+|++|+.++.. ++|||||.... ....+..|+++|||.+......+..|+++.+++++.+
T Consensus        79 ~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~-v~pi~lp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~  156 (240)
T 1gvk_B           79 VHPYWNTDDVAAGYDIALLRLAQSVTLNSY-VQLGVLPRAGT-ILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYA  156 (240)
T ss_dssp             ECTTCCTTCGGGCCCCEEEEESSCCCCBTT-BCCCCCCCTTC-CCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHH
T ss_pred             ECCCCCCCCCCCCCcEEEEEECCccccCCC-ccceecCCCCC-CCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHH
Confidence            5899987766  899999999999999988 99999998765 3457889999999998766666788999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC--CCCCCCCCeEEEeCcccHHHHH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS--GCAKSGYPDVYTKLSFYLPWIR  426 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~--~c~~~~~p~v~t~V~~~~~WI~  426 (436)
                      .|+..+.....+++.|||++. .+..+.|.|||||||++.. +++|+|+||+||+.  +|+..+.|++||||+.|++||+
T Consensus       157 ~C~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~  234 (240)
T 1gvk_B          157 ICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWIN  234 (240)
T ss_dssp             HHTSTTTTGGGCCTTEEEECC-SSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHH
T ss_pred             HhccccccCccCCcceEeecC-CCCCcccCCCCcCceEEEE-CCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHH
Confidence            998863222247899999984 4456899999999999985 78999999999995  7887778999999999999999


Q ss_pred             HHHhh
Q psy16044        427 KQINI  431 (436)
Q Consensus       427 ~~i~~  431 (436)
                      ++|+.
T Consensus       235 ~~i~~  239 (240)
T 1gvk_B          235 NVIAS  239 (240)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99975


No 111
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.97  E-value=9.4e-31  Score=236.98  Aligned_cols=157  Identities=27%  Similarity=0.472  Sum_probs=134.3

Q ss_pred             CCCcccccc-cccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccc
Q psy16044        271 AWPWQNLIT-SFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISV  349 (436)
Q Consensus       271 ~~p~~~~~~-~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~  349 (436)
                      .||.|+... ..||||||||++|+.++.. ++|||||.... ....++.|+++|||.+......+..|+++.+++++.++
T Consensus        73 ~Hp~y~~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~  150 (240)
T 2zgc_A           73 QHPRYKPVPALENDLALLQLDGKVKPSRT-IRPLALPSKRQ-VVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRM  150 (240)
T ss_dssp             ECTTCBCTTSCBSCCEEEEESSCCCCCSS-CCCCCCCCTTC-CCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHH
T ss_pred             ECCCCCCCCCCcccEEEEEeCCcccCCCc-eeeeEcCCCCC-CCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHH
Confidence            589998876 8899999999999999988 99999998765 45678999999999987655667889999999999999


Q ss_pred             ccc--ccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccHHHHH
Q psy16044        350 CRD--KYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYLPWIR  426 (436)
Q Consensus       350 C~~--~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~~WI~  426 (436)
                      |+.  .+..  .+.++|||++...+..+.|.|||||||+|.   +.|+|+||+||| ..|+..+.|++||||+.|++||+
T Consensus       151 C~~~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~  225 (240)
T 2zgc_A          151 CNNSRFWNG--SLSPSMVCLAADSKDQAPCKGDSGGPLVCG---KGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIR  225 (240)
T ss_dssp             HTSTTTTTT--CCCTTEEEEECSSTTCBCCTTCTTCEEEET---TTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHH
T ss_pred             hCCccccCC--CCCCceEeeccCCCCCccCCCCccCeeEEC---CCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHH
Confidence            988  4543  468899999876656789999999999994   347899999999 67987778999999999999999


Q ss_pred             HHHhhhhh
Q psy16044        427 KQINIAVD  434 (436)
Q Consensus       427 ~~i~~~~~  434 (436)
                      ++|+...+
T Consensus       226 ~~~~~~~~  233 (240)
T 2zgc_A          226 KVTGRSAL  233 (240)
T ss_dssp             HHHCCC--
T ss_pred             HHHhhcch
Confidence            99976554


No 112
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.97  E-value=1.1e-30  Score=236.85  Aligned_cols=157  Identities=34%  Similarity=0.607  Sum_probs=135.4

Q ss_pred             CCCcccccccc--cccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITSF--LSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~~--~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+.....  +|||||+|++|+.++.. |+|||||.... ....+..|+++|||.+......+..|+++.+++++.+
T Consensus        79 ~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~  156 (240)
T 1fon_A           79 VHPLWNSNCVACGNDIALVKLSRSAQLGDK-VQLANLPPAGD-ILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYE  156 (240)
T ss_dssp             ECTTCCTTCGGGCCCCEEEECSSCCCCTTS-CCCCBCCCTTC-CCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHH
T ss_pred             ECCCCcCCCccCCCCEEEEEecCccccCCc-ccccCCCCccc-CCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHH
Confidence            59999887777  99999999999999988 99999998765 3467889999999988766566788999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC--CCCCCCCCeEEEeCcccHHHHH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS--GCAKSGYPDVYTKLSFYLPWIR  426 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~--~c~~~~~p~v~t~V~~~~~WI~  426 (436)
                      +|++.+.....+.+.|||++. .+ .+.|.|||||||++...+++|+|+||+||+.  +|+..+.|++||||+.|++||+
T Consensus       157 ~C~~~~~~~~~~~~~~~Ca~~-~~-~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~  234 (240)
T 1fon_A          157 HCSQWDWWGITVKKTMVCAGG-DT-RSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWID  234 (240)
T ss_dssp             HHTSTTTTGGGCCTTEEEECC-SS-SCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHH
T ss_pred             HhccceecCCccccceEeecC-CC-CcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHH
Confidence            998864322246899999984 33 6899999999999986578999999999996  7987678999999999999999


Q ss_pred             HHHhh
Q psy16044        427 KQINI  431 (436)
Q Consensus       427 ~~i~~  431 (436)
                      ++|+.
T Consensus       235 ~~~~~  239 (240)
T 1fon_A          235 ETIAS  239 (240)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99975


No 113
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.97  E-value=2e-30  Score=236.89  Aligned_cols=156  Identities=26%  Similarity=0.547  Sum_probs=138.3

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....+|||||+|++|+.++.. ++|||||....   ..+..|+++|||.+... ..+..|+++.+++++.++|
T Consensus        92 ~hp~y~~~~~~~DIAll~L~~~~~~~~~-v~picLp~~~~---~~~~~~~v~GwG~~~~~-~~~~~L~~~~~~~~~~~~C  166 (251)
T 3gov_B           92 LHPQYDPNTFENDVALVELLESPVLNAF-VMPICLPEGPQ---QEGAMVIVSGWGKQFLQ-RFPETLMEIEIPIVDHSTC  166 (251)
T ss_dssp             ECTTCBTTTTBTCCEEEEESSCCCCSSS-CCCCBCCSSCC---CTTCEEEEEECSCCTTS-CCCSBCEEEEEEEECHHHH
T ss_pred             ECCCCCCCCCCCCEEEEEeCCcccCCCc-eEEeECCCCCC---CCCCEEEEEcCCCCCCC-CCCccceEEeeEEECHHHh
Confidence            5899999899999999999999999988 99999997765   67899999999987653 3578899999999999999


Q ss_pred             ccccCCC-ccCCCCceecccCCCCCCCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHH
Q psy16044        351 RDKYGDS-VELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       351 ~~~~~~~-~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      +..+... ..++++|||++...+..+.|.|||||||++.. .+++|+|+||+|||.+|+..+.|++||+|+.|++||+++
T Consensus       167 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~  246 (251)
T 3gov_B          167 QKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRV  246 (251)
T ss_dssp             HHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHHH
T ss_pred             hhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHH
Confidence            9887542 34789999998877667999999999999985 578999999999999999878899999999999999999


Q ss_pred             Hhh
Q psy16044        429 INI  431 (436)
Q Consensus       429 i~~  431 (436)
                      |+.
T Consensus       247 ~~~  249 (251)
T 3gov_B          247 TGV  249 (251)
T ss_dssp             HCC
T ss_pred             hcc
Confidence            864


No 114
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.97  E-value=1.4e-30  Score=239.31  Aligned_cols=160  Identities=35%  Similarity=0.647  Sum_probs=139.1

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC--ccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD--LVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~--~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+.....||||||||++|+.++.. ++|||||.... ....+..|+++|||.+.....  .+..|+++.+++++.+
T Consensus        78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~  155 (261)
T 3gyl_B           78 PHPSYLQEGSQGDIALLQLSRPITFSRY-IRPISLPAAQA-SFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRE  155 (261)
T ss_dssp             ECTTCCSTTCSCCCEEEEESSCCCCBTT-BCCCBCCCTTC-CCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHH
T ss_pred             ECCCcCCCCCCCcEEEEEECCCccCCCc-eeccCCCCccc-CCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHH
Confidence            5899998889999999999999999988 99999997765 455789999999998765433  2678999999999999


Q ss_pred             ccccccCC------CccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccH
Q psy16044        349 VCRDKYGD------SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYL  422 (436)
Q Consensus       349 ~C~~~~~~------~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~  422 (436)
                      .|+..+..      ...+.++|||++...+..+.|.|||||||+|.. +++|+|+||+|||.+|+..+.|++||+|+.|+
T Consensus       156 ~C~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~  234 (261)
T 3gyl_B          156 TCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPV-EGLWYLTGIVSWGDACGARNRPGVYTLASSYA  234 (261)
T ss_dssp             HHHHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEE-TTEEEEEEEECCCCCSSCTTCCEEEEEGGGGH
T ss_pred             HhhhhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEe-CCEEEEEEEEecCCCCCCCCCCCEEEEHHHhH
Confidence            99987652      124789999998766667999999999999985 78999999999999998878899999999999


Q ss_pred             HHHHHHHhhhh
Q psy16044        423 PWIRKQINIAV  433 (436)
Q Consensus       423 ~WI~~~i~~~~  433 (436)
                      +||+++|++..
T Consensus       235 ~WI~~~i~~~~  245 (261)
T 3gyl_B          235 SWIQSKVTELQ  245 (261)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHhhcc
Confidence            99999997643


No 115
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.97  E-value=2.5e-30  Score=235.69  Aligned_cols=159  Identities=31%  Similarity=0.609  Sum_probs=135.0

Q ss_pred             CCCcccc-cccccccceeecccc----cccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC-ccccceEEEEEe
Q psy16044        271 AWPWQNL-ITSFLSAALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKLRQIRVPL  344 (436)
Q Consensus       271 ~~p~~~~-~~~~~diali~l~~~----~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~-~~~~l~~~~~~~  344 (436)
                      .||.|+. ....+|||||+|++|    +.++.. |+|||||.... ....+..|+++|||.+..... .+..|+++.+++
T Consensus        77 ~hp~y~~~~~~~~DiALl~L~~~~~~~~~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~  154 (248)
T 2r0l_A           77 PYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQF-VQPICLPEPGS-TFPAGHKCQIAGWGHLDENVSGYSSSLREALVPL  154 (248)
T ss_dssp             ECTTCCTTSTTTTCCEEEEECCSSSCSSCCBTT-BCCCBCCCTTC-CCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEB
T ss_pred             eCCccCcCCCCCCCEEEEEeCCcccccccCCCc-EEEEECCCCCC-CCCCCCEEEEEEccccCCCCCCCCchheEEEEee
Confidence            4888887 678899999999999    788887 99999997654 456789999999998765433 467899999999


Q ss_pred             eCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHH
Q psy16044        345 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPW  424 (436)
Q Consensus       345 ~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~W  424 (436)
                      ++.++|+........+++.|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++|
T Consensus       155 ~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~W  233 (248)
T 2r0l_A          155 VADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDW  233 (248)
T ss_dssp             CCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHH
T ss_pred             eCHHHhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEE-CCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHH
Confidence            999999875322224689999998766567899999999999985 7899999999999999877789999999999999


Q ss_pred             HHHHHhhh
Q psy16044        425 IRKQINIA  432 (436)
Q Consensus       425 I~~~i~~~  432 (436)
                      |+++|+..
T Consensus       234 I~~~~~~~  241 (248)
T 2r0l_A          234 INDRIRPP  241 (248)
T ss_dssp             HHHHHC--
T ss_pred             HHHHhcCC
Confidence            99999754


No 116
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.97  E-value=4.1e-31  Score=238.90  Aligned_cols=157  Identities=31%  Similarity=0.536  Sum_probs=135.3

Q ss_pred             CCCcccc--cccccccceeecccccccCCCCeeeeccCCCCCC-CCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCc
Q psy16044        271 AWPWQNL--ITSFLSAALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNI  347 (436)
Q Consensus       271 ~~p~~~~--~~~~~diali~l~~~~~~~~~~v~picl~~~~~~-~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~  347 (436)
                      .||.|+.  ....||||||+|++|+.++.. ++|||||..... ....+..|+++|||.+......+..|+++.+++++.
T Consensus        75 ~Hp~y~~~~~~~~~DIALl~L~~~~~~~~~-v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~  153 (235)
T 2wph_S           75 PHHNFNAAINTYNHDIALLELDEPLVLNSY-VTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDR  153 (235)
T ss_dssp             ECTTTTSSSSCCTTCCEEEEESSCCCCBTT-BCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECH
T ss_pred             eCCCCcccCCcCCCCEEEEEECCcCcCCCC-ccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCH
Confidence            4899987  677899999999999999987 999999965431 123468899999998876666678899999999999


Q ss_pred             cccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHH
Q psy16044        348 SVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       348 ~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~  427 (436)
                      ++|++.+..  .++++|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++||++
T Consensus       154 ~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~  230 (235)
T 2wph_S          154 ATCLRSTKF--TITNNMFCAGFHEGGRDSCQGDSGGPHVTEV-EGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKE  230 (235)
T ss_dssp             HHHHHTCSS--CCCTTEEEESCTTCSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHH
T ss_pred             HHhcCcccC--CCCCCEEEeCCCCCCCccCCCCCCCceEEeE-CCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHH
Confidence            999987754  4689999998766667899999999999984 7899999999999999887889999999999999999


Q ss_pred             HHhh
Q psy16044        428 QINI  431 (436)
Q Consensus       428 ~i~~  431 (436)
                      +|+.
T Consensus       231 ~~~~  234 (235)
T 2wph_S          231 KTKL  234 (235)
T ss_dssp             HCCC
T ss_pred             HHhc
Confidence            8863


No 117
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.97  E-value=1e-30  Score=239.09  Aligned_cols=161  Identities=30%  Similarity=0.544  Sum_probs=138.1

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCC--CCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKR--PVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~--~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+.....||||||+|++|+.++.. |+|||||.....  ....+..|+++|||.+......+..|+++.+++++.+
T Consensus        78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~  156 (254)
T 2bz6_H           78 IPSTYVPGTTNHDIALLRLHQPVVLTDH-VVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQ  156 (254)
T ss_dssp             EETTCCTTSCSSCCEEEEESSCCCCBTT-BCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHH
T ss_pred             ECCCCCCCCCcCcEEEEEECCccccCCC-ccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHH
Confidence            4899998889999999999999999988 999999965421  2345789999999988766566788999999999999


Q ss_pred             ccccccCC---CccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHH
Q psy16044        349 VCRDKYGD---SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWI  425 (436)
Q Consensus       349 ~C~~~~~~---~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI  425 (436)
                      +|...+..   ...+++.|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++||
T Consensus       157 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI  235 (254)
T 2bz6_H          157 DCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHY-RGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWL  235 (254)
T ss_dssp             HHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHH
T ss_pred             HHhhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEeE-CCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHH
Confidence            99887643   124688999998766667899999999999985 78999999999999998777899999999999999


Q ss_pred             HHHHhhhh
Q psy16044        426 RKQINIAV  433 (436)
Q Consensus       426 ~~~i~~~~  433 (436)
                      +++|+...
T Consensus       236 ~~~~~~~~  243 (254)
T 2bz6_H          236 QKLMRSEP  243 (254)
T ss_dssp             HHHHTSCC
T ss_pred             HHHHhccC
Confidence            99997543


No 118
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.97  E-value=2.5e-30  Score=234.93  Aligned_cols=159  Identities=28%  Similarity=0.524  Sum_probs=137.2

Q ss_pred             CCCcccc-cccccccceeecccccccCCCCeeeeccCCCCCC-CCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNL-ITSFLSAALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~-~~~~~diali~l~~~~~~~~~~v~picl~~~~~~-~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+. ....||||||||++|+.++.. ++|||||..... ....+..|.++|||.+.. ...+..|+++.+++++.+
T Consensus        75 ~hp~y~~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~~~~~~~~~~~~~~GwG~~~~-~~~~~~l~~~~~~i~~~~  152 (242)
T 3tvj_B           75 IHEGYTHDAGFDNDIALIKLNNKVVINSN-ITPICLPRKEAESFMRTDDIGTASGWGLTQR-GFLARNLMYVDIPIVDHQ  152 (242)
T ss_dssp             ECTTCCTTSCSTTCCEEEEESSCCCCBTT-BCCCBCCCTTGGGGSCTTCEEEEEESCCCTT-SSCCSBCEEEEEEBCCHH
T ss_pred             eCCCCCCCCCCcCcEEEEEECCccccCCC-EecCCcCCCcccccccCCCEEEEEEeCCCCC-CCcCccceEEeeeEEcHH
Confidence            4898887 667899999999999999988 999999976542 356789999999998764 455788999999999999


Q ss_pred             ccccccCCC----ccCCCCceecccCCCCCCCccCCCCceeeeEe-cCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccH
Q psy16044        349 VCRDKYGDS----VELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYL  422 (436)
Q Consensus       349 ~C~~~~~~~----~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~  422 (436)
                      +|+..+...    ..++++|||++...+..+.|.|||||||++.. .+++|+|+||+||| .+|+..+.|++||||+.|+
T Consensus       153 ~C~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~  232 (242)
T 3tvj_B          153 KCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYI  232 (242)
T ss_dssp             HHHHHHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGH
T ss_pred             HHHHhhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHH
Confidence            999876432    23789999998766667999999999999986 57899999999999 7898878899999999999


Q ss_pred             HHHHHHHhh
Q psy16044        423 PWIRKQINI  431 (436)
Q Consensus       423 ~WI~~~i~~  431 (436)
                      +||+++|++
T Consensus       233 ~WI~~~i~~  241 (242)
T 3tvj_B          233 PWIENIISD  241 (242)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999999875


No 119
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.97  E-value=3.4e-30  Score=234.73  Aligned_cols=158  Identities=30%  Similarity=0.501  Sum_probs=135.5

Q ss_pred             CCCcccccc--cccccceeecccc----cccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC-ccccceEEEEE
Q psy16044        271 AWPWQNLIT--SFLSAALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKLRQIRVP  343 (436)
Q Consensus       271 ~~p~~~~~~--~~~diali~l~~~----~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~-~~~~l~~~~~~  343 (436)
                      .||.|+...  ..||||||+|++|    +.++.. ++|||||.... ....+..|+++|||.+..... .+..|+++.++
T Consensus        83 ~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~-v~pi~lp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~  160 (247)
T 3mhw_U           83 LHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRT-IQTISLPSMYN-DPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK  160 (247)
T ss_dssp             ECTTCEEC-CCEESCCEEEEEECTTSCCCCCBTT-BCCCBCCCTTC-CCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEE
T ss_pred             ECCCCCCCcCCCCCcEEEEEeCCccccccccCCc-ccccccCCCcC-CCCCCCEEEEEecCCcCCCCcccchhheeeEEE
Confidence            489998766  6799999999999    778877 99999998654 456789999999998765543 47789999999


Q ss_pred             eeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHH
Q psy16044        344 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       344 ~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~  423 (436)
                      +++.++|+..+.....+.++|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++
T Consensus       161 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~  239 (247)
T 3mhw_U          161 LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLP  239 (247)
T ss_dssp             EECHHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHH
T ss_pred             EEChHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEE-CCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHH
Confidence            9999999986433335789999998776667999999999999985 789999999999999998788999999999999


Q ss_pred             HHHHHHhh
Q psy16044        424 WIRKQINI  431 (436)
Q Consensus       424 WI~~~i~~  431 (436)
                      ||+++|++
T Consensus       240 WI~~~~~e  247 (247)
T 3mhw_U          240 WIRSHTKE  247 (247)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHhcC
Confidence            99999864


No 120
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.97  E-value=3.5e-30  Score=239.18  Aligned_cols=159  Identities=31%  Similarity=0.609  Sum_probs=135.0

Q ss_pred             CCCcccc-cccccccceeecccc----cccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC-ccccceEEEEEe
Q psy16044        271 AWPWQNL-ITSFLSAALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKLRQIRVPL  344 (436)
Q Consensus       271 ~~p~~~~-~~~~~diali~l~~~----~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~-~~~~l~~~~~~~  344 (436)
                      .||.|+. ....+|||||+|++|    +.++.. |+|||||.... ....+..|+++|||.+..... .+..|+++.+++
T Consensus       112 ~hp~y~~~~~~~~DIALl~L~~~~~~~v~~~~~-v~picLp~~~~-~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i  189 (283)
T 1yc0_A          112 PYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQF-VQPICLPEPGS-TFPAGHKCQIAGWGHLDENVSGYSSSLREALVPL  189 (283)
T ss_dssp             ECTTCCTTSTTTTCCEEEEECCBTTBSSCCBTT-BCCCBCCCTTC-CCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEB
T ss_pred             ecCccccCCCCCCceEEEEeCCCccccccccCc-eeeeECCCCcC-CCCCCCEEEEEEeCccCCCCCccCchheEeEEEE
Confidence            4899987 778899999999999    788887 99999997654 446789999999998765432 467899999999


Q ss_pred             eCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHH
Q psy16044        345 HNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPW  424 (436)
Q Consensus       345 ~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~W  424 (436)
                      ++.++|+........+++.|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++|
T Consensus       190 ~~~~~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~W  268 (283)
T 1yc0_A          190 VADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDW  268 (283)
T ss_dssp             CCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHH
T ss_pred             ECHHHhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEE-CCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHH
Confidence            999999875322234789999998766567899999999999985 7899999999999999877889999999999999


Q ss_pred             HHHHHhhh
Q psy16044        425 IRKQINIA  432 (436)
Q Consensus       425 I~~~i~~~  432 (436)
                      |+++|+..
T Consensus       269 I~~~i~~~  276 (283)
T 1yc0_A          269 INDRIRPP  276 (283)
T ss_dssp             HHHHCC--
T ss_pred             HHHHhcCC
Confidence            99999754


No 121
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.97  E-value=3.1e-30  Score=238.94  Aligned_cols=159  Identities=31%  Similarity=0.522  Sum_probs=135.5

Q ss_pred             CCCcccccc--cccccceeecccc----cccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC-ccccceEEEEE
Q psy16044        271 AWPWQNLIT--SFLSAALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKLRQIRVP  343 (436)
Q Consensus       271 ~~p~~~~~~--~~~diali~l~~~----~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~-~~~~l~~~~~~  343 (436)
                      .||.|+..+  ..||||||+|++|    +.++.. |+|||||.... ....+..|+++|||.+..... .+..|+++.++
T Consensus       106 ~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~  183 (276)
T 2jde_A          106 LHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRT-IQTICLPSMYN-DPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK  183 (276)
T ss_dssp             ECTTCEECSSCEESCCEEEEEECTTSCCCCCBTT-BCCCBCCBTTB-CCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEE
T ss_pred             ECCCCCCCCCcCCCcEEEEEeCCccccccccCCc-eEccCCCCccc-CCCCCCEEEEEECCccCCCCcccchhhhhceec
Confidence            489998776  6799999999999    778887 99999997654 456789999999998865543 47889999999


Q ss_pred             eeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHH
Q psy16044        344 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       344 ~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~  423 (436)
                      +++.++|+..+.....+.++|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||+|+.|++
T Consensus       184 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~  262 (276)
T 2jde_A          184 LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLP  262 (276)
T ss_dssp             EECHHHHTSTTTTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred             ccChHHhCcccccCccCCCCeEEecCCCCCCcccccccCcceEEEe-CCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHH
Confidence            9999999986433335789999998776667999999999999985 789999999999999998788999999999999


Q ss_pred             HHHHHHhhh
Q psy16044        424 WIRKQINIA  432 (436)
Q Consensus       424 WI~~~i~~~  432 (436)
                      ||+++|+..
T Consensus       263 WI~~~~~~~  271 (276)
T 2jde_A          263 WIRSHTKEE  271 (276)
T ss_dssp             HHHHTC---
T ss_pred             HHHHHhhhh
Confidence            999998753


No 122
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.97  E-value=2.3e-31  Score=236.64  Aligned_cols=187  Identities=19%  Similarity=0.192  Sum_probs=131.6

Q ss_pred             CCCCCcceEEEeeeccCCCCCCeeeEEEEec---CCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeee
Q psy16044         34 IRGAWPWQVSLQVLHPRLGLMPHWCGAVLIH---PSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVE  110 (436)
Q Consensus        34 ~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs---~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~  110 (436)
                      .+++|||+++|++...  + ..++|+||||+   ++||||||||+...... .....+.|++|..+....   ...+.|+
T Consensus         2 ~~~~~p~~g~l~~~~~--~-~~~~CgGslI~s~s~~~VLTAAHC~~~~~~~-~~~~~~~v~~G~~~~~~~---~~~~~v~   74 (218)
T 3cp7_A            2 NPADSPHIGKVFFSTN--Q-GDFVCSANIVASANQSTVATAGHCLHDGNGG-QFARNFVFAPAYDYGESE---HGVWAAE   74 (218)
T ss_dssp             -CTTCTTEEEEEEEET--T-EEEEEEEEEBCCTTSCEEEECGGGTBCCTTC-BBCEEEEEEETCSSSCCT---TCCEEEE
T ss_pred             CCCCCceEEEEEEEcC--C-CCeEEEEEEEecCCCCEEEEChHhcCcCCCC-eeecCEEEECcccCCCCC---ccEEEEE
Confidence            3578999999988532  1 26899999999   99999999998652100 113457788887654322   2356799


Q ss_pred             EEEeCCCCC---CCCCceeEEEeCCC--CCCCCCcee-eeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        111 RIRVHEEFH---NYHHDIALLKLSRP--TSARDKGVR-AVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       111 ~i~~hp~y~---~~~~DiAll~L~~~--~~~~~~~v~-pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      ++++||+|+   ...||||||||++|  +. ++..++ +++|+..  .  ..+..++++|||.+.....  ..|      
T Consensus        75 ~~~~hp~y~~~~~~~~DiAll~L~~~~~~~-~~~~v~~~~~l~~~--~--~~g~~~~v~GwG~~~~~~~--~~l------  141 (218)
T 3cp7_A           75 ELVTSAEWANRGDFEHDYAFAVLETKGGTT-VQQQVGTASPIAFN--Q--PRGQYYSAYGYPAAAPFNG--QEL------  141 (218)
T ss_dssp             EEEECHHHHHHCCGGGCCEEEEECCBTTBC-HHHHHSCCBCBCCS--C--CSSCEEEEEECCCSTTCCS--SSC------
T ss_pred             EEEECcccccCCCCcCCEEEEEEeCCCCcC-hhHhcCcccceeec--C--CCCCEEEEEeCCCCCCCCC--cee------
Confidence            999999995   36799999999999  66 556788 8999763  1  3578899999998653111  112      


Q ss_pred             ccchhhhhhh-cCCC-cCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCccc
Q psy16044        185 LHNISVCRDK-YGDS-VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRY  254 (436)
Q Consensus       185 ~~~~~~C~~~-~~~~-~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y  254 (436)
                          ..|... +... ......|+|+.        |.|||||||++. .+++++|+||+|||.+ |+....|
T Consensus       142 ----~~C~~~~~~~~~~~~~~~~~Ca~--------~~GDSGGPlv~~-~~g~~~lvGIvS~G~g-c~~~~~~  199 (218)
T 3cp7_A          142 ----HSCHGTATNDPMGSSTQGIPCNM--------TGGSSGGPWFLG-NGTGGAQNSTNSYGYT-FLPNVMF  199 (218)
T ss_dssp             ----EEEEEECEECTTSSSCEEEECCC--------CTTCTTCEEEES-SSSSSCEEEECCEEET-TEEEEEE
T ss_pred             ----eEeeeeEEcCCCCCceEEecCCC--------CCCCcCCeeEEc-cCCCeEEEEEEccccC-CCCCcEE
Confidence                356542 1111 11223789982        569999999997 4667899999999987 6654443


No 123
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.97  E-value=3.9e-30  Score=233.36  Aligned_cols=155  Identities=30%  Similarity=0.551  Sum_probs=132.5

Q ss_pred             CCCcc--cccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQ--NLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~--~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|  +.....+|||||+|++|+.++.. ++|||||....... .++.|+++|||.+......+..|+++.+++++.+
T Consensus        79 ~hp~y~~~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~~~~-~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~  156 (241)
T 1m9u_A           79 MHENYGAGTASYSNDIAILHLATSISLGGN-IQAAVLPANNNNDY-AGTTCVISGWGRTDGTNNLPDILQKSSIPVITTA  156 (241)
T ss_dssp             ECTTTTCSSSTTTTCCEEEEESSCCCCCSS-CCCCCCCSCSSCCC-TTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHH
T ss_pred             eCCCcCCCCCcccccEEEEEecCccccCCC-ccccCcCCCcCCCC-CCCEEEEEeCcccCCCCCcccceeEeeEEEEcHH
Confidence            48999  67778999999999999999988 99999998733223 7899999999998765556789999999999999


Q ss_pred             ccccccCCCcc--CCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEe----cCCCCCCCCCeEEEeCcccH
Q psy16044        349 VCRDKYGDSVE--LHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSF----GSGCAKSGYPDVYTKLSFYL  422 (436)
Q Consensus       349 ~C~~~~~~~~~--~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~----~~~c~~~~~p~v~t~V~~~~  422 (436)
                      +|+..+.....  +.++|||++...+..+.|.|||||||++..  ++|+|+||+||    +.+|+..+.|++||||++|+
T Consensus       157 ~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~--~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~  234 (241)
T 1m9u_A          157 QCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPD--GGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYL  234 (241)
T ss_dssp             HHHHHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEES--SSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTH
T ss_pred             HhhhhhcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeC--CCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhH
Confidence            99987643222  789999998766667899999999999973  88999999999    46788777899999999999


Q ss_pred             HHHHHHH
Q psy16044        423 PWIRKQI  429 (436)
Q Consensus       423 ~WI~~~i  429 (436)
                      +||+++|
T Consensus       235 ~WI~~~~  241 (241)
T 1m9u_A          235 GWIGDNS  241 (241)
T ss_dssp             HHHHHHC
T ss_pred             hHHhhhC
Confidence            9999875


No 124
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.97  E-value=2.2e-30  Score=235.21  Aligned_cols=156  Identities=27%  Similarity=0.465  Sum_probs=131.8

Q ss_pred             CCCccccc---ccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCc
Q psy16044        271 AWPWQNLI---TSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNI  347 (436)
Q Consensus       271 ~~p~~~~~---~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~  347 (436)
                      .||.|+..   ...||||||||++|+.++.. |+|||||.... ....+..|+++|||.+...  .+..|+++.+++++.
T Consensus        79 ~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~--~~~~L~~~~~~~~~~  154 (242)
T 2qy0_B           79 VHPDYRQDESYNFEGDIALLELENSVTLGPN-LLPICLPDNDT-FYDLGLMGYVSGFGVMEEK--IAHDLRFVRLPVANP  154 (242)
T ss_dssp             ECTTCCTTCSSCCTTCCEEEEESSCCCCBTT-BCCCBCCCSGG-GGCTTCEEEEEECCCCSSS--CCSBCEEEEEEBCCH
T ss_pred             ECCCCccCcCCCCCCcEEEEEECCCCcCCCC-cceeecCCCcc-ccCCCCeEEEEeeccCCCc--CCccceEEEEEEeCH
Confidence            58999865   67899999999999999988 99999997653 3457889999999987643  567899999999999


Q ss_pred             cccccccCC---CccCCCCceecccCCCCCCCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHH
Q psy16044        348 SVCRDKYGD---SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       348 ~~C~~~~~~---~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~  423 (436)
                      ++|+..+..   ...++++|||++...+..+.|.|||||||++.. .+++|+|+||+|||.+|+.  .|++||||++|++
T Consensus       155 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~--~~~vyt~V~~y~~  232 (242)
T 2qy0_B          155 QACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVD  232 (242)
T ss_dssp             HHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS--SCEEEEEGGGGHH
T ss_pred             HHHHHHhccccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCC--CCcEEEEHHHHHH
Confidence            999986532   124688999998765567999999999999964 5789999999999999975  3899999999999


Q ss_pred             HHHHHHhhh
Q psy16044        424 WIRKQINIA  432 (436)
Q Consensus       424 WI~~~i~~~  432 (436)
                      ||+++|+++
T Consensus       233 WI~~~~~~~  241 (242)
T 2qy0_B          233 WIKKEMEEE  241 (242)
T ss_dssp             HHHHHTTC-
T ss_pred             HHHHHhhcc
Confidence            999999754


No 125
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.96  E-value=6.2e-30  Score=229.02  Aligned_cols=148  Identities=30%  Similarity=0.601  Sum_probs=130.3

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||||++|+.++.. ++|||||....   ..++.|.++|||.+... ..+..|+++.+++++.++|
T Consensus        74 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~-v~pi~l~~~~~---~~~~~~~v~GwG~~~~~-~~~~~L~~~~~~~~~~~~C  148 (223)
T 2bdg_A           74 RHPEYNRPLLANDLMLIKLDESVSESDT-IRSISIASQCP---TAGNSCLVSGWGLLANG-RMPTVLQCVNVSVVSEEVC  148 (223)
T ss_dssp             ECTTTTSSTTCSCCEEEEESSCCCCCSS-CCCCCBCSSCC---CTTCEEEEEESCCCTTS-CCCSBCEEEEEEBCCHHHH
T ss_pred             eCCCCCCCCCcCcEEEEEECCcccCCCc-eecccCCCCCC---CCCCEEEEEeCcccCCC-CCCCcceEEEEEEeCHHHh
Confidence            5999998889999999999999999988 99999997543   67889999999987654 4577899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC-CCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~-~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      ++.+..  .+.+.|||++...+..+.|.|||||||++++     +|+||+|||. .|+..+.|++||||+.|++||+++|
T Consensus       149 ~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i  221 (223)
T 2bdg_A          149 SKLYDP--LYHPSMFCAGGGQDQKDSCNGDSGGPLICNG-----YLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV  221 (223)
T ss_dssp             HHHSTT--TCCTTEEEECCSTTCCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHH
T ss_pred             hhhhCC--CCCCCeEeccCCCCCCCcCCCCCCchheEcc-----EEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHh
Confidence            998765  4689999998755567899999999999942     6999999997 6987788999999999999999998


Q ss_pred             h
Q psy16044        430 N  430 (436)
Q Consensus       430 ~  430 (436)
                      +
T Consensus       222 ~  222 (223)
T 2bdg_A          222 Q  222 (223)
T ss_dssp             H
T ss_pred             c
Confidence            6


No 126
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.96  E-value=1.3e-29  Score=229.25  Aligned_cols=154  Identities=30%  Similarity=0.579  Sum_probs=132.0

Q ss_pred             CCCccccccc--ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITS--FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~--~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+....  .+|||||||++|+.++.. ++|||||.... ..+.++.|.++|||.+......+..|+++.+++++.+
T Consensus        79 ~hp~y~~~~~~~~~DiALl~L~~~~~~~~~-v~picL~~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~  156 (236)
T 1elt_A           79 IHSGWNSDDVAGGYDIALLRLNTQASLNSA-VQLAALPPSNQ-ILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHA  156 (236)
T ss_dssp             ECTTCCTTCGGGCCCCEEEEESSCCCCSSS-CCCCCCCCTTC-CCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHH
T ss_pred             ECCCCCCCCCCCCccEEEEECCCCCccCCc-EEeccCCCccc-cCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHH
Confidence            4899987766  899999999999999987 99999997664 3467889999999988766566788999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC--CCCCCCCCeEEEeCcccHHHHH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS--GCAKSGYPDVYTKLSFYLPWIR  426 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~--~c~~~~~p~v~t~V~~~~~WI~  426 (436)
                      +|+..+.....+++.|||++. .+ .+.|.|||||||++.. +++|+|+||+||+.  +|+..+.|++||||++|++||+
T Consensus       157 ~C~~~~~~~~~~~~~~~Ca~~-~~-~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~  233 (236)
T 1elt_A          157 TCSSSGWWGSTVKTTMVCAGG-GA-NSGCNGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMN  233 (236)
T ss_dssp             HHTSTTTTGGGSCTTEEEECC-SS-CBCCTTCTTCEEEEEE-TTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHH
T ss_pred             HhccccccCCcCCcceEEecC-CC-CccCCCCCCCeeEEEE-CCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHH
Confidence            999863222247899999984 33 6899999999999985 78999999999985  7987778999999999999999


Q ss_pred             HHH
Q psy16044        427 KQI  429 (436)
Q Consensus       427 ~~i  429 (436)
                      ++|
T Consensus       234 ~~i  236 (236)
T 1elt_A          234 GIM  236 (236)
T ss_dssp             HHC
T ss_pred             hhC
Confidence            875


No 127
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.96  E-value=3.8e-30  Score=243.37  Aligned_cols=155  Identities=27%  Similarity=0.468  Sum_probs=131.6

Q ss_pred             CCCccccc---ccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCc
Q psy16044        271 AWPWQNLI---TSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNI  347 (436)
Q Consensus       271 ~~p~~~~~---~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~  347 (436)
                      .||.|+..   ...||||||+|++|+.++.. |+|||||.... ....+..|+++|||.+...  .+..|+++.+++++.
T Consensus       168 ~Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~-v~PicLp~~~~-~~~~g~~~~v~GWG~t~~~--~~~~L~~~~v~i~~~  243 (329)
T 1md8_A          168 VHPDYRQDESYNFEGDIALLELENSVTLGPN-LLPICLPDNDT-FYDLGLMGYVSGFGVMEEK--IAHDLRFVRLPVANP  243 (329)
T ss_dssp             ECSSCCSSCTTCCTTCCEEEEESSCCCCBTT-BCCCBCCCSGG-GGCTTCEEEEEECCBCSSS--BCSBCEEEEEEBCCH
T ss_pred             ECCCcccccCCCCCccEEEEEECCcccCCCc-eEccccCCCcc-ccCCCCEEEEEeCCCCCCC--CCccceEEEEEEcCH
Confidence            58999864   67899999999999999988 99999997653 3356889999999987643  577899999999999


Q ss_pred             cccccccCC---CccCCCCceecccCCCCCCCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHH
Q psy16044        348 SVCRDKYGD---SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       348 ~~C~~~~~~---~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~  423 (436)
                      ++|++.+..   ...++++||||+...+..+.|+|||||||++.. .+++|+|+||+|||.+|+.  .|++||||+.|++
T Consensus       244 ~~C~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~--~~gvyT~V~~y~~  321 (329)
T 1md8_A          244 QACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVD  321 (329)
T ss_dssp             HHHHHHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSS--SCEEEEEGGGTHH
T ss_pred             HHHHHHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCC--CCcEEEEHHHHHH
Confidence            999886532   124688999998765567999999999999964 5689999999999999984  3899999999999


Q ss_pred             HHHHHHhh
Q psy16044        424 WIRKQINI  431 (436)
Q Consensus       424 WI~~~i~~  431 (436)
                      ||+++|++
T Consensus       322 WI~~~i~~  329 (329)
T 1md8_A          322 WIKKEMEE  329 (329)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999863


No 128
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.96  E-value=8.4e-30  Score=230.02  Aligned_cols=155  Identities=32%  Similarity=0.569  Sum_probs=131.2

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+..+..||||||+|++|+.++.. ++|||||.... ....++.|+++|||.+......+..|+++.+++++.++|
T Consensus        74 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  151 (234)
T 1orf_A           74 PYPCYDPATREGDLKLLQLTEKAKINKY-VTILHLPKKGD-DVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVC  151 (234)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCSSS-SCCCCCCSSCC-CCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHH
T ss_pred             cCCCCCCCCCCCCEEEEEECCcCccCCC-eeeeecCCCcC-CCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHc
Confidence            4999998899999999999999999988 99999997665 456789999999998876555678899999999999999


Q ss_pred             cc--ccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC--CCCCCCCCeEEEeCc-ccHHHH
Q psy16044        351 RD--KYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS--GCAKSGYPDVYTKLS-FYLPWI  425 (436)
Q Consensus       351 ~~--~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~--~c~~~~~p~v~t~V~-~~~~WI  425 (436)
                      ++  .+.....+.++|||++...+..+.|.|||||||+++   +  +|+||+|||.  +|+..+.|++||||+ +|++||
T Consensus       152 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI  226 (234)
T 1orf_A          152 NDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCE---G--VFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWI  226 (234)
T ss_dssp             TSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEET---T--EEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHH
T ss_pred             CCccccccCCccCCCEEEecCCCCCCcCCCCCCCCeEEEC---C--EEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHH
Confidence            84  332111234599999876556799999999999994   2  6999999997  798777899999999 999999


Q ss_pred             HHHHhhh
Q psy16044        426 RKQINIA  432 (436)
Q Consensus       426 ~~~i~~~  432 (436)
                      +++|+..
T Consensus       227 ~~~~~~~  233 (234)
T 1orf_A          227 IMTIKGA  233 (234)
T ss_dssp             HHHHCC-
T ss_pred             HHHHHhc
Confidence            9999764


No 129
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.96  E-value=1.7e-29  Score=228.89  Aligned_cols=148  Identities=28%  Similarity=0.505  Sum_probs=125.9

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVEL  360 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~  360 (436)
                      .+|||||+|++|+.++.. ++|||||.... ....+..|.++|||.+.... .+..|+++.+++++.++|+..+.....+
T Consensus        82 ~~DiALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~-~~~~L~~~~~~~~~~~~C~~~~~~~~~~  158 (240)
T 1si5_H           82 GSDLVLMKLARPAVLDDF-VSTIDLPNYGS-TIPEKTSCSVYGWGYTGLIN-YDGLLRVAHLYIMGNEKCSQHHRGKVTL  158 (240)
T ss_dssp             TTCEEEEEESSCCCCSSS-CCCCBCCCTTC-CCCTTCEEEEEESSCCCCSS-CCCBCEEEEEEEECGGGTCC-------C
T ss_pred             CCcEEEEEECCccccCCc-eeccCcCCcCC-CCCCCCEEEEEEeCCCCCCC-CCCeeEEEEEeecCHHHhhhhhcCCccC
Confidence            799999999999999987 99999997654 45678999999999876543 4678999999999999999887543337


Q ss_pred             CCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHhhh
Q psy16044        361 HGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       361 ~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                      .+.|||++...+..+.|.|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++||+++|+..
T Consensus       159 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~~  229 (240)
T 1si5_H          159 NESEICAGAEKIGSGPCEGDYGGPLVCEQ-HKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTY  229 (240)
T ss_dssp             CTTEEEEECSSSCCBCCTTCTTCEEEEEC-SSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred             CCCEEeecCCCCCCEeccCCCCCcEEEEE-CCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHhcc
Confidence            89999998766567999999999999985 789999999999999987778999999999999999999754


No 130
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.96  E-value=9.5e-30  Score=248.17  Aligned_cols=159  Identities=27%  Similarity=0.502  Sum_probs=135.8

Q ss_pred             CCCccccc-ccccccceeecccccccCCCCeeeeccCCCCCC-CCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLI-TSFLSAALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~-~~~~diali~l~~~~~~~~~~v~picl~~~~~~-~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+.. ...||||||||++|+.++.. |+|||||..... .+..+..++++|||.+... ..+..|+++.+++++.+
T Consensus       236 ~Hp~y~~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~-~~~~~L~~~~v~v~~~~  313 (403)
T 1zjk_A          236 IHEGYTHDAGFDNDIALIKLNNKVVINSN-ITPICLPRKEAESFMRTDDIGTASGWGLTQRG-FLARNLMYVDIPIVDHQ  313 (403)
T ss_dssp             ECTTCCTTSCCTTCCEEEEESSCCCCBTT-BCCCBCCCGGGGGGSSTTCEEEEEESCTTSSS-CCCSBCEEEEEEEECHH
T ss_pred             ECCCCCCCCCCcccEEEEEeCCcCcCCCc-eecccCCCcccccccCCCCeEEEEcCCcCCCC-ccCcccEEEEEeEeCHH
Confidence            48999877 78899999999999999988 999999976542 2457889999999987654 45788999999999999


Q ss_pred             ccccccCCC----ccCCCCceecccCCCCCCCccCCCCceeeeEe-cCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccH
Q psy16044        349 VCRDKYGDS----VELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYL  422 (436)
Q Consensus       349 ~C~~~~~~~----~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~  422 (436)
                      +|+..+...    ..++++||||+...+.++.|+|||||||++.. .+++|+|+||+||| .+|+..+.|++||||+.|+
T Consensus       314 ~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~  393 (403)
T 1zjk_A          314 KCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYI  393 (403)
T ss_dssp             HHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGH
T ss_pred             HHhhhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHH
Confidence            999877532    14789999998776667999999999999986 46899999999999 7898777899999999999


Q ss_pred             HHHHHHHhh
Q psy16044        423 PWIRKQINI  431 (436)
Q Consensus       423 ~WI~~~i~~  431 (436)
                      +||+++|+.
T Consensus       394 ~WI~~~i~~  402 (403)
T 1zjk_A          394 PWIENIISD  402 (403)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHhc
Confidence            999999975


No 131
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.96  E-value=9.3e-30  Score=228.65  Aligned_cols=151  Identities=27%  Similarity=0.461  Sum_probs=130.4

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||||++|+.++.. ++|||||.... ....++.|+++|||.+......+..|+++.+++++.++|
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~-v~picLp~~~~-~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C  153 (227)
T 1iau_A           76 PHPAYNPKNFSNDIMLLQLERKAKRTRA-VQPLRLPSNKA-QVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKC  153 (227)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTT-BCCCCCCCTTC-CCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHH
T ss_pred             CCCCCCCCCCCCCeEEEEECCcccCCCc-eecccCCCCCC-CCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHh
Confidence            5999998889999999999999999988 99999997664 446789999999998876556678999999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+... ...+.|||++...+..+.|.|||||||+++   +  +|+||+|||  |+....|++||||+.|++||+++|+
T Consensus       154 ~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g--c~~~~~p~vyt~v~~~~~WI~~~~~  225 (227)
T 1iau_A          154 ESDLRHY-YDSTIELCVGDPEIKKTSFKGDSGGPLVCN---K--VAQGIVSYG--RNNGMPPRACTKVSSFVHWIKKTMK  225 (227)
T ss_dssp             HHHTTTT-CCTTTEEEESCTTSCCBCCTTCTTSEEEET---T--EEEEEEEEE--CTTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred             hhHhccc-cCCCcEEEeECCCCCCeeeecCCCchheEe---e--EEEEEEeEe--cCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            9887542 234559999877656799999999999994   2  699999999  7665679999999999999999997


Q ss_pred             h
Q psy16044        431 I  431 (436)
Q Consensus       431 ~  431 (436)
                      +
T Consensus       226 ~  226 (227)
T 1iau_A          226 R  226 (227)
T ss_dssp             C
T ss_pred             h
Confidence            5


No 132
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.96  E-value=8.9e-30  Score=230.82  Aligned_cols=155  Identities=25%  Similarity=0.511  Sum_probs=132.6

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCC-ccccceEEEEEeeCccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGD-LVSKLRQIRVPLHNISV  349 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~-~~~~l~~~~~~~~~~~~  349 (436)
                      .||.|+.....||||||+|++|+.++.. |+|||||...  ....++.|+++|||.+..... .+..|+++.+++++.++
T Consensus        80 ~hp~y~~~~~~~DIALl~L~~~~~~~~~-v~pi~l~~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~  156 (240)
T 1mza_A           80 PFSRVTSDPQSNDIMLVKLQTAAKLNKH-VKMLHIRSKT--SLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKL  156 (240)
T ss_dssp             ECCCSSCSSSSSCCEEEEESSCCCCBTT-BCCCCBCSSC--CCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHH
T ss_pred             eCCCccCCCCCceEEEEEeCCCcccCCc-eeeeecCCcc--cCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHH
Confidence            4899988888999999999999999988 9999999753  246789999999998876544 57889999999999999


Q ss_pred             cc--cccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcc-cHHHHH
Q psy16044        350 CR--DKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSF-YLPWIR  426 (436)
Q Consensus       350 C~--~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~-~~~WI~  426 (436)
                      |+  ..+.....++++|||++...+..+.|.|||||||+|+   +  +|+||+|||.+|+..+.|++||+|+. |++||+
T Consensus       157 C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~~---~--~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~  231 (240)
T 1mza_A          157 CNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICK---G--VFHAIVSGGHECGVATKPGIYTLLTKKYQTWIK  231 (240)
T ss_dssp             HTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEET---T--EEEEEECSSCCSSCTTCCEEEEECCHHHHHHHH
T ss_pred             cCCcceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEEC---C--EEEEEEEECCCCCCCCCCcEEEeChHHHHHHHH
Confidence            98  4454322468999999876566789999999999994   2  69999999999988788999999999 999999


Q ss_pred             HHHhhhh
Q psy16044        427 KQINIAV  433 (436)
Q Consensus       427 ~~i~~~~  433 (436)
                      ++|+...
T Consensus       232 ~~~~~~~  238 (240)
T 1mza_A          232 SNLVPPH  238 (240)
T ss_dssp             HHTCCSC
T ss_pred             HhccCCC
Confidence            9997654


No 133
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.96  E-value=1.5e-29  Score=227.14  Aligned_cols=150  Identities=31%  Similarity=0.545  Sum_probs=129.7

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+..+..||||||||++|+.++.. ++|||||.... ....++.|.++|||.+......+..|+++.+++++.++|
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C  153 (227)
T 1euf_A           76 PHPDYNDETLANDIMLLKLTRKADITDK-VSPINLPRSLA-EVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKC  153 (227)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCCSS-CCCCCCCCTTC-CCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHH
T ss_pred             eCCCCCCCCCcCceEEEEECCcCcCCCc-eeccCCCCccc-cCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHh
Confidence            5999998889999999999999999988 99999997655 456789999999999876556678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+..  .++++|||++...+....|.|||||||+|+   +  +|+||+|||  |+....|++||||+.|++||+++|+
T Consensus       154 ~~~~~~--~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~~---~--~l~Gi~S~g--c~~~~~p~vyt~V~~y~~WI~~~~~  224 (227)
T 1euf_A          154 IARFKN--YIPFTQICAGDPSKRKNSFSGDSGGPLVCN---G--VAQGIVSYG--RNDGTTPDVYTRISSFLSWIHSTMR  224 (227)
T ss_dssp             HTTCTT--CCTTTEEEESCTTSCCBCCTTCTTCEEEET---T--EEEEEEEEC--CTTCCSCEEEEEGGGTHHHHHHHTC
T ss_pred             hHhhcC--cCCCcEEEccCCCCCCcccccCCCCceEEC---C--EEEEEEEEe--CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence            988765  468899999876543467899999999994   2  699999998  7666679999999999999999987


Q ss_pred             h
Q psy16044        431 I  431 (436)
Q Consensus       431 ~  431 (436)
                      .
T Consensus       225 ~  225 (227)
T 1euf_A          225 R  225 (227)
T ss_dssp             -
T ss_pred             h
Confidence            4


No 134
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.96  E-value=2e-29  Score=239.46  Aligned_cols=157  Identities=25%  Similarity=0.510  Sum_probs=130.3

Q ss_pred             CCCcccc-------cccccccceeecccccccCCCCeeeeccCCCCCC-CCCCCCeEEEEecCCCCCCCCccccceEEEE
Q psy16044        271 AWPWQNL-------ITSFLSAALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  342 (436)
Q Consensus       271 ~~p~~~~-------~~~~~diali~l~~~~~~~~~~v~picl~~~~~~-~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~  342 (436)
                      .||.|+.       .+..||||||||++|+.++.. |+|||||..... ....+..|+++|||.+... ..+..|+++.+
T Consensus       155 ~Hp~y~~~~~~~~~~~~~nDIALl~L~~~v~~~~~-v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~-~~~~~L~~~~v  232 (333)
T 1elv_A          155 IHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPT-VSPICLPGTSSDYNLMDGDLGLISGWGRTEKR-DRAVRLKAARL  232 (333)
T ss_dssp             ECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTT-BCCCBCCCSSGGGCCCTTCEEEEEESCCCSSC-SSCSBCEEEEE
T ss_pred             ECCCCcccccccccCCCcceEEEEEeCCCCcCCCc-ccceecCCCcccccccCCcEEEEEECcCcCCC-CcCceeEEEEE
Confidence            5888884       467899999999999999988 999999976542 2456899999999987653 35778999999


Q ss_pred             EeeCccccccccCCC-------ccCCCCceecccCCCCCCCccCCCCceeeeEec-CC-cEEEEEEEEecCCCCCCCCCe
Q psy16044        343 PLHNISVCRDKYGDS-------VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLK-DG-RWYLAGITSFGSGCAKSGYPD  413 (436)
Q Consensus       343 ~~~~~~~C~~~~~~~-------~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~-~~-~~~l~Gi~S~~~~c~~~~~p~  413 (436)
                      ++++.++|++.+...       ..++++||||+... +++.|+|||||||++... ++ +|+|+||+|||.+|+.   |+
T Consensus       233 ~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~-~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~~---~~  308 (333)
T 1elv_A          233 PVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEK-GMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT---YG  308 (333)
T ss_dssp             EEECHHHHHTC----------CCCCCTTEEEEECST-TCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTTS---EE
T ss_pred             EEEcHHHhhhhhhcccccccccccCCCCeECccCCC-CCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCCC---Cc
Confidence            999999999876431       24789999998655 568999999999999752 35 9999999999999974   89


Q ss_pred             EEEeCcccHHHHHHHHhhhh
Q psy16044        414 VYTKLSFYLPWIRKQINIAV  433 (436)
Q Consensus       414 v~t~V~~~~~WI~~~i~~~~  433 (436)
                      +||||+.|++||+++|+...
T Consensus       309 vyt~V~~y~~WI~~~~~~~~  328 (333)
T 1elv_A          309 LYTRVKNYVDWIMKTMQENS  328 (333)
T ss_dssp             EEEEGGGGHHHHHHHHHHTC
T ss_pred             EEeEHHHHHHHHHHHHhccC
Confidence            99999999999999997653


No 135
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.96  E-value=2.1e-29  Score=225.49  Aligned_cols=147  Identities=33%  Similarity=0.603  Sum_probs=127.7

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||+|++|+.++.. ++|||||.....  ..+..|.++|||.+......+..|+++.+++++.++|
T Consensus        75 ~hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picL~~~~~~--~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  151 (222)
T 1eq9_A           75 VNKNYDDFLLRNDVALVHLTNPIKFNDL-VQPIKLSTNDED--LESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQC  151 (222)
T ss_dssp             ECTTCBTTTTBCCCEEEEESSCCCCBTT-BCCCEECSCCTT--CTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHH
T ss_pred             ECCCCCCCCCCCCEEEEEECCccccCCc-eEccCCCCCCcC--CCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHh
Confidence            5899998889999999999999999988 999999977652  5788999999998876555678899999999999999


Q ss_pred             c-cccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        351 R-DKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       351 ~-~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      + ..+.    +.+.|||++. ..+.+.|.|||||||+++   +  +|+||+|||.+|+. +.|++||||+.|++||+++|
T Consensus       152 ~~~~~~----~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~C~~-~~p~vyt~V~~~~~WI~~~~  220 (222)
T 1eq9_A          152 ERDQWR----VIDSHICTLT-KRGEGACHGDSGGPLVAN---G--AQIGIVSFGSPCAL-GEPDVYTRVSSFVSWINANL  220 (222)
T ss_dssp             HHHSSS----CCTTEEEECC-CTTCBCCTTCTTCEEEET---T--EEEEEEEECSTTTS-SSCEEEEEGGGGHHHHHHTS
T ss_pred             CcccCC----CCccEEeecC-CCCCeeeeCCccceEEEC---C--EEEEEEEECCCcCC-CCCCEEEEHHHHHHHHHHHh
Confidence            8 4442    5789999976 344689999999999984   2  69999999999987 67999999999999999988


Q ss_pred             hh
Q psy16044        430 NI  431 (436)
Q Consensus       430 ~~  431 (436)
                      ++
T Consensus       221 ~~  222 (222)
T 1eq9_A          221 KK  222 (222)
T ss_dssp             CC
T ss_pred             hC
Confidence            63


No 136
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.96  E-value=2.8e-29  Score=225.12  Aligned_cols=152  Identities=26%  Similarity=0.407  Sum_probs=131.2

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....+|||||||++|+.     +.|+||+....   ..+..|.++|||.+......+..|+++.+++++.++|
T Consensus        72 ~hp~y~~~~~~~DIALl~L~~~v~-----~~~i~l~~~~~---~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C  143 (224)
T 3beu_A           72 QAPGFTKETYGKDWALIKLAQPIN-----QPTLKIATTTA---YNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAAC  143 (224)
T ss_dssp             ECTTCCCGGGSCCCEEEEESSCCC-----SCCCEECCSST---TSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHH
T ss_pred             eCCCcCCCcCCCCEEEEEeCCCCC-----CCccccccccc---cCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHh
Confidence            589999888999999999999986     56888886543   3456899999998876666678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+... .+.+.|||++...+..+.|.|||||||++...+++|+|+||+|||.+|+..+.|++||||++|++||+++|+
T Consensus       144 ~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~  222 (224)
T 3beu_A          144 RSSSSFI-LVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAAR  222 (224)
T ss_dssp             HHHCSSC-CCGGGEEEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred             hhhcCCc-cCCCCeEEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            9877532 467899999876666789999999999998667899999999999999877789999999999999999997


Q ss_pred             h
Q psy16044        431 I  431 (436)
Q Consensus       431 ~  431 (436)
                      +
T Consensus       223 ~  223 (224)
T 3beu_A          223 T  223 (224)
T ss_dssp             T
T ss_pred             c
Confidence            5


No 137
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.96  E-value=3.1e-29  Score=225.38  Aligned_cols=151  Identities=28%  Similarity=0.552  Sum_probs=132.7

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||+|++|+.++.. ++|||||.... ....++.|+++|||.+......+..|+++.+++++.+.|
T Consensus        77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C  154 (227)
T 3fzz_A           77 PHPDYNPDDRSNDIMLLKLVRNAKRTRA-VRPLNLPRRNA-HVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVC  154 (227)
T ss_dssp             ECTTCBTTTTBTCCEEEEESSCCCCBTT-BCCCCCCCTTC-CCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHH
T ss_pred             ECcCCCCCCCcCCEEEEEECCcCCCCCc-ccccCCCCccc-CCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHh
Confidence            4999999999999999999999999988 99999998765 456789999999998876666678999999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+... ...++|||++......+.|.|||||||+++.     +|+||+|||..|+..  |++||||++|++||+++|+
T Consensus       155 ~~~~~~~-~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~-----~l~Gi~S~g~~c~~~--p~vyt~V~~~~~WI~~~i~  226 (227)
T 3fzz_A          155 ESQFQSS-YNRANEICVGDSKIKGASFEEDSGGPLVCKR-----AAAGIVSYGQTDGSA--PQVFTRVLSFVSWIKKTMK  226 (227)
T ss_dssp             HHHHTTT-CCTTTEEEECCCSSCBCCTTTTTTCEEEETT-----EEEEEEEECCTTCSS--SEEEEEGGGTHHHHHHHHT
T ss_pred             hhhhccc-cCCCceEEEeCCCCCCcccccCCccceEEec-----CCcEEEEECCCCCCC--CeEEEEhHHhHHHHHHHHh
Confidence            9877543 3478999998766667899999999999953     699999999988754  9999999999999999987


Q ss_pred             h
Q psy16044        431 I  431 (436)
Q Consensus       431 ~  431 (436)
                      +
T Consensus       227 ~  227 (227)
T 3fzz_A          227 H  227 (227)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 138
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.96  E-value=3.9e-29  Score=225.10  Aligned_cols=153  Identities=29%  Similarity=0.540  Sum_probs=132.9

Q ss_pred             CCCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC-CccccceEEEEEeeCcc
Q psy16044        270 GAWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       270 ~~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~-~~~~~l~~~~~~~~~~~  348 (436)
                      ..||.|+.....+|||||||++|+.++.. ++|||||....   ..++.|+++|||.+.... ..+..|+++.+++++.+
T Consensus        72 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picL~~~~~---~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~  147 (231)
T 2aiq_A           72 FCLNTRNDTIWDKDIMLIRLNRPVRNSAH-IAPLSLPSNPP---SVGSVCRIMGWGTITSPNATLPDVPHCANINILDYA  147 (231)
T ss_dssp             CCSSCCSSSTTTTCCEEEEESSCCCCBTT-BCCCCCCSSCC---CTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHH
T ss_pred             EECCCCCCCCCCCCEEEEEecCCCCCCCc-EEeeECCCCCC---CCCCEEEEEeCCccCCCCCccCchhhhccceecchh
Confidence            35899998889999999999999999988 99999997665   568999999999876433 34678999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccHHHHHH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~~WI~~  427 (436)
                      +|+..+..   +.+.|||++...+..+.|.|||||||+++   +  +|+||+||| ..|+..+.|++||||+.|++||++
T Consensus       148 ~C~~~~~~---~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~  219 (231)
T 2aiq_A          148 VCQAAYKG---LAATTLCAGILEGGKDTCKGDSGGPLICN---G--QFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQS  219 (231)
T ss_dssp             HHHHHCTT---CCSSEEEEECTTCSCBCCTTCTTCEEEET---T--EEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHH
T ss_pred             hhhhhhcC---CCcCcEEeccCCCCCcccCCcCCCcEEEC---C--EEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHH
Confidence            99988754   68899999866666799999999999994   2  599999999 789877789999999999999999


Q ss_pred             HHhhhhh
Q psy16044        428 QINIAVD  434 (436)
Q Consensus       428 ~i~~~~~  434 (436)
                      +|+.+.+
T Consensus       220 ~~~~~~~  226 (231)
T 2aiq_A          220 IISGNTD  226 (231)
T ss_dssp             HHHTCSS
T ss_pred             HHcCCCC
Confidence            9987543


No 139
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.96  E-value=5.9e-29  Score=222.93  Aligned_cols=150  Identities=27%  Similarity=0.494  Sum_probs=128.3

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC-CccccceEEEEEeeCccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRVPLHNISV  349 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~-~~~~~l~~~~~~~~~~~~  349 (436)
                      .||.|+..  .+|||||||++|+.++.. ++|||||.... ....++.|+++|||.+.... ..+..|+++.+++++.++
T Consensus        74 ~hp~y~~~--~~DiALl~L~~~~~~~~~-v~picL~~~~~-~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~  149 (224)
T 1pq7_A           74 VHPSYSGN--NNDLAILKLSTSIPSGGN-IGYARLAASGS-DPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRAT  149 (224)
T ss_dssp             ECTTCBTT--BTCCEEEEESSCCCCBTT-BCCCCBCCTTC-CCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHH
T ss_pred             ECCCCCCC--CCCEEEEEeCCCCcCCCc-ccceecCCccc-CCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHH
Confidence            48888765  899999999999999988 99999996443 34678999999999887554 456789999999999999


Q ss_pred             cccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        350 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       350 C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      |+..+... .+.+.|||++...+..+.|.|||||||++.  ++  +|+||+|||.+|+..+.|++||||+.|++||+++|
T Consensus       150 C~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~--~g--~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i  224 (224)
T 1pq7_A          150 CRAQYGTS-AITNQMFCAGVSSGGKDSCQGDSGGPIVDS--SN--TLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA  224 (224)
T ss_dssp             HHHHHCTT-TSCTTEEEECCTTCCCBCCTTCTTCEEECT--TC--CEEEEEEECSSSSCTTCCEEEEETTTSHHHHHHHC
T ss_pred             hhHhhcCC-CCCCCeEEeecCCCCCCCCcCCCCcceECc--CC--eEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHhhC
Confidence            99887522 468999999876666799999999999984  33  69999999999988778999999999999999875


No 140
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.96  E-value=2e-29  Score=244.41  Aligned_cols=157  Identities=29%  Similarity=0.504  Sum_probs=133.7

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCC--CCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADK--RPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~--~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+..+..||||||+|++|+.++.. |+|||||....  .....+..|+++|||.+.... .+..|+++.+++++.+
T Consensus       211 ~Hp~y~~~~~~nDIALL~L~~~v~~~~~-V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~-~s~~L~~~~v~iv~~~  288 (408)
T 2xxl_A          211 IHEKYDARHIMHDIALLKLNRSVPFQKH-IKPICLPITDELKEKAEQISTYFVTGWGTTENGS-SSDVLLQANVPLQPRS  288 (408)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCCBTT-BCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBC-SCSBCEEEEEEEECHH
T ss_pred             eCCCCCccccccceEEEEECCccccccC-ccccCCCCcccccccccCCCEEEEEEeCcCCCCC-CCchheEeeeeecCHH
Confidence            4999998899999999999999999988 99999997642  113568899999999887544 5788999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEe-----cCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-----KDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYL  422 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-----~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~  422 (436)
                      +|++.+...  +..+||||+... +++.|.|||||||++..     .+++|+|+||+||| .+|+..+.|+|||||+.|+
T Consensus       289 ~C~~~~~~~--~~~~~iCAg~~~-g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~  365 (408)
T 2xxl_A          289 ACSQAYRRA--VPLSQLCVGGGD-LQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYV  365 (408)
T ss_dssp             HHHHHHTSC--CCTTEEEECCSC-SSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGH
T ss_pred             HHHHHhccc--CCCceEeecCCC-CCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHH
Confidence            999988653  456999998754 46999999999994432     35799999999999 7898878899999999999


Q ss_pred             HHHHHHHhhh
Q psy16044        423 PWIRKQINIA  432 (436)
Q Consensus       423 ~WI~~~i~~~  432 (436)
                      +||+++|+..
T Consensus       366 ~WI~~~i~~~  375 (408)
T 2xxl_A          366 QWITDTMASN  375 (408)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHhhc
Confidence            9999999753


No 141
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.96  E-value=6.5e-29  Score=222.58  Aligned_cols=148  Identities=32%  Similarity=0.557  Sum_probs=127.2

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||||++|+.++.. ++|||||.... ....++.|.++|||.+. ....+..|+++.+++++.++|
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~-~~~~~~~l~~~~~~i~~~~~C  152 (224)
T 1cgh_A           76 RHPQYNQRTIQNDIMLLQLSRRVRRNRN-VNPVALPRAQE-GLRPGTLCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQC  152 (224)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCCBTT-BCCCBCCCTTC-CCCTTCEEEEEESCCSS-SSCCCSBCEEEEEEBCCHHHH
T ss_pred             cCCCCCCCCCcCCEEEEEECCCCcCCCc-eEeeECCCCCC-CCCCCCEEEEEECCcCC-CCCCCCcceEEEEEeeCHHHH
Confidence            4999998889999999999999999987 99999997765 45678999999999887 344577899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+..  ...+.|||++...+..+.|.|||||||+++   +  +|+||+|||. |.. ..|++||||+.|++||+++|+
T Consensus       153 ~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~-~~~-~~p~vyt~V~~~~~WI~~~~~  223 (224)
T 1cgh_A          153 LRIFGS--YDPRRQICVGDRRERKAAFKGDSGGPLLCN---N--VAHGIVSYGK-SSG-VPPEVFTRVSSFLPWIRTTMR  223 (224)
T ss_dssp             HHHCTT--CCTTTEEEECCTTSCCBCCTTCTTCEEEET---T--EEEEEEEECC-TTC-CSCEEEEEGGGGHHHHHHHHH
T ss_pred             HHHhCc--CCCcceEeeccCCCCCeEeeCCCccceEEc---c--EEEEEEEEEC-CCC-CCCeEEEEHHHhHHHHHHHhh
Confidence            988743  345669999876656789999999999994   2  6999999998 433 459999999999999999986


No 142
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.96  E-value=2.7e-29  Score=225.24  Aligned_cols=148  Identities=34%  Similarity=0.674  Sum_probs=126.9

Q ss_pred             CCCcc-cc--cccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCC-CCCCccccceEEEEEeeC
Q psy16044        271 AWPWQ-NL--ITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVK-PKGDLVSKLRQIRVPLHN  346 (436)
Q Consensus       271 ~~p~~-~~--~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~-~~~~~~~~l~~~~~~~~~  346 (436)
                      .||.| +.  ....+|||||||++|+.++.. ++|||||....   ..++.|+++|||.+. .....+..|+++.+++++
T Consensus        73 ~Hp~y~~~~~~~~~~DIALl~L~~~~~~~~~-v~pi~L~~~~~---~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~  148 (225)
T 1npm_A           73 QHPCYNNSNPEDHSHDIMLIRLQNSANLGDK-VKPVQLANLCP---KVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYS  148 (225)
T ss_dssp             ECTTCCSSCTTCCTTCCEEEEESSCCCCSSS-SCCCEECSSCC---CTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECC
T ss_pred             ECCCCCCCCccCccccEEEEeeCCcccCCCc-eeceECCCCCC---CCCCEEEEEeCCcccCCCCCCCccceEeEEeeec
Confidence            48988 54  677899999999999999987 99999997643   578999999999874 334457889999999999


Q ss_pred             ccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccHHHH
Q psy16044        347 ISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYLPWI  425 (436)
Q Consensus       347 ~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~~WI  425 (436)
                      .++|+..+..  .++++|||++... +.+.|.|||||||+++   +  +|+||+||| ..|+..+.|++||||++|++||
T Consensus       149 ~~~C~~~~~~--~~~~~~~Ca~~~~-~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI  220 (225)
T 1npm_A          149 QNKCERAYPG--KITEGMVCAGSSN-GADTCQGDSGGPLVCD---G--MLQGITSWGSDPCGKPEKPGVYTKICRYTTWI  220 (225)
T ss_dssp             HHHHHHHSTT--TCCTTEEEEECTT-CCBCCTTCTTCEEEET---T--EEEEEEEECCSSSCBTTBCEEEEEHHHHHHHH
T ss_pred             HHHhhHHhCC--CCCCCEEeecCCC-CCeecCCCCCchheEC---C--EEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHH
Confidence            9999998865  4689999998654 4689999999999984   2  599999999 5798767899999999999999


Q ss_pred             HHHHh
Q psy16044        426 RKQIN  430 (436)
Q Consensus       426 ~~~i~  430 (436)
                      +++|+
T Consensus       221 ~~~~~  225 (225)
T 1npm_A          221 KKTMD  225 (225)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            99874


No 143
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.96  E-value=7.2e-29  Score=224.08  Aligned_cols=153  Identities=29%  Similarity=0.446  Sum_probs=133.2

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC-CccccceEEEEEeeCccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRVPLHNISV  349 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~-~~~~~l~~~~~~~~~~~~  349 (436)
                      .||.|+.....||||||+|++|+.++.. ++|||||....   ..+..|+++|||.+.... ..+..|+.+.+++++.+.
T Consensus        74 ~h~~~~~~~~~~DIALl~L~~~v~~~~~-v~pi~l~~~~~---~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~  149 (234)
T 3s69_A           74 CPNKKNDEVLDKDIMLIKLDSRVSNSEH-IVPLSLPSSPP---SVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAV  149 (234)
T ss_dssp             CTTCCTTCTTSSCCEEEEESSCCCCBTT-BCCCCCCSSCC---CTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHH
T ss_pred             CCCccCCCCCcccEEEEeeCCcCCCCCc-ceeeecCCCCC---CCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHH
Confidence            4899998889999999999999999988 99999998765   458999999999876543 456789999999999999


Q ss_pred             cccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccHHHHHHH
Q psy16044        350 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       350 C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      |+..+... .+.++|||++...+..+.|.|||||||+++.     .|+||+|||.. |+..+.|++||||+.|++||+++
T Consensus       150 C~~~~~~~-~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~  223 (234)
T 3s69_A          150 CQAGYPEL-LTEYRTLCAGILEGGKDTCGGDSGGPLICNG-----QFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSI  223 (234)
T ss_dssp             HHHHCTTC-CTTSCEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred             Hhhhcccc-cCCcceEeccCCCCCCccCCCCCccceEEcC-----EEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHH
Confidence            99987642 4678999998776677999999999999953     39999999976 88777899999999999999999


Q ss_pred             Hhhhh
Q psy16044        429 INIAV  433 (436)
Q Consensus       429 i~~~~  433 (436)
                      |+.+.
T Consensus       224 i~~~~  228 (234)
T 3s69_A          224 IAGNT  228 (234)
T ss_dssp             HHTCT
T ss_pred             hcCCc
Confidence            98654


No 144
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.96  E-value=4.3e-29  Score=224.53  Aligned_cols=151  Identities=27%  Similarity=0.533  Sum_probs=130.4

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....+|||||+|++|+.++.. ++|||||.... ....++.|.++|||.+......+..|+++.+++++.++|
T Consensus        77 ~hp~y~~~~~~~DIAll~L~~~~~~~~~-v~pi~l~~~~~-~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C  154 (228)
T 2xw9_A           77 PHPDSQPDTIDHDLLLLQLSEKATLGPA-VRPLPWQRVDR-DVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATC  154 (228)
T ss_dssp             ECTTCCTTCCTTCCEEEEESSCCCCBTT-BCCCCBCCSCC-CCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHH
T ss_pred             eCCCCCCCCCCCcEEEEEeCCCcccCCC-eeecccCCccc-CCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHh
Confidence            4899998889999999999999999887 99999998654 456788999999998876656678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC-CCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~-~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      ++.+.....+.+.|||++.  ...+.|.|||||||+++   +  +|+||+||+. .|+..+.|++||||++|++||+++|
T Consensus       155 ~~~~~~~~~~~~~~~Ca~~--~~~~~C~GDsGgPL~~~---~--~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i  227 (228)
T 2xw9_A          155 NRRTHHDGAITERLMCAES--NRRDSCKGDAGGPLVCG---G--VLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL  227 (228)
T ss_dssp             TSTTTTTTCCCTTEEEECC--SSCBCCTTCTTCEEEET---T--EEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred             cCccccCCcccCCEEecCC--CCCccCCCCCcccEEEC---C--EEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence            9887643357899999975  44689999999999994   2  6999999997 7987778999999999999999987


Q ss_pred             h
Q psy16044        430 N  430 (436)
Q Consensus       430 ~  430 (436)
                      +
T Consensus       228 ~  228 (228)
T 2xw9_A          228 A  228 (228)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 145
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.96  E-value=1.7e-29  Score=234.36  Aligned_cols=154  Identities=19%  Similarity=0.270  Sum_probs=126.0

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCC--CCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADK--RPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~--~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+..+..||||||||++|+.++.. |+|||||....  ..+..+..++++|||.  .....+..|+++.+++++.+
T Consensus       125 ~Hp~y~~~~~~nDIALl~L~~pv~~~~~-v~picLp~~~~~~~~~~~~~~~~v~GwG~--~~~~~~~~L~~~~v~~~~~~  201 (283)
T 3f1s_B          125 VHMRYDADAGENDLSLLELEWPIQCPGA-GLPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTRPVTLVEGE  201 (283)
T ss_dssp             ECTTCBTTTTBTCCEEEEESSCCCTTTT-CCCCBCCCHHHHHHTTTTTSCEEEEECBC--C-------CEEEEEEEECHH
T ss_pred             ECCCCCCCCCCCCEEEEEeCCcccCCCC-EEeEECCCCccccccccCCCEEEEEECCC--CCCCCCceeeEEEEeEeCHH
Confidence            5899999899999999999999999998 99999997652  2346789999999998  33455788999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      +|++.+..  .++++|||++...   ..|.|||||||++. .+++|+|+||+||+. |+..+.|+|||||+.|++||+++
T Consensus       202 ~C~~~~~~--~~~~~~~Ca~~~~---~~~~gDSGgPlv~~-~~~~~~l~GIvS~g~-c~~~~~p~vyt~V~~y~~WI~~~  274 (283)
T 3f1s_B          202 ECGQVLNV--TVTTRTYCERSSV---AAMHWMDGSVVTRE-HRGSWFLTGVLGSQP-VGGQAHMVLVTKVSRYSLWFKQI  274 (283)
T ss_dssp             HHHHHHTS--CCCTTEEEEECSS---CGGGBCTTCEEEEE-CSSCEEEEEEECCCS-GGGCSSEEEEEEGGGGHHHHHHH
T ss_pred             HHhhhhcC--CCCCCeEcccCCC---CCCCCCCCCcEEEE-ECCEEEEEEEEEeCC-CCCCCcceEEEEhHHhHHHHHHH
Confidence            99998865  5789999997543   35678999999998 478999999999986 66667899999999999999999


Q ss_pred             Hhhhhh
Q psy16044        429 INIAVD  434 (436)
Q Consensus       429 i~~~~~  434 (436)
                      |++..+
T Consensus       275 ~~~~~~  280 (283)
T 3f1s_B          275 MNAHHH  280 (283)
T ss_dssp             HTC---
T ss_pred             hhcchh
Confidence            986654


No 146
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.96  E-value=9.1e-29  Score=222.12  Aligned_cols=150  Identities=31%  Similarity=0.477  Sum_probs=127.5

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||||++|+.++.. ++|||||.... ....+..|.++|||.+......+..|+++.+++++.++|
T Consensus        77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~-v~pi~l~~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C  154 (226)
T 4ag1_A           77 RHPKYNTSTLHHDIMLLKLKEKASLTLA-VGTLPFPSQFN-FVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQAC  154 (226)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCCSS-SCCCCCC------CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGG
T ss_pred             eCCCCCCCCCcCcEEEEEECCCCccCCc-eeccccCCccc-CCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHc
Confidence            4999999899999999999999999988 99999997655 456799999999999876666678999999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +... .  ...+.|||++...+..+.|.|||||||++..     +|+||+|||..|+..  |++||||+.|++||+++|+
T Consensus       155 ~~~~-~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~--p~vyt~v~~~~~WI~~~i~  224 (226)
T 4ag1_A          155 SHFR-D--FDHNLQLCVGNPRKTKSAFKGDSGGPLLCAG-----VAQGIVSYGRSDAKP--PAVFTRISHYRPWINQILQ  224 (226)
T ss_dssp             TTST-T--CCTTTEEEESCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECBTTCCS--CEEEEEHHHHHHHHHHHHH
T ss_pred             cccc-C--cCccceEeeccCCCCCcCccCCCCCceEEcC-----EEEEEEEECCCCCCC--CCEEEEhHHHHHHHHHHHh
Confidence            8432 2  3478999998766667999999999999942     699999999988764  9999999999999999997


Q ss_pred             hh
Q psy16044        431 IA  432 (436)
Q Consensus       431 ~~  432 (436)
                      .+
T Consensus       225 ~n  226 (226)
T 4ag1_A          225 AN  226 (226)
T ss_dssp             HC
T ss_pred             cC
Confidence            53


No 147
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.96  E-value=8.2e-29  Score=223.87  Aligned_cols=154  Identities=20%  Similarity=0.337  Sum_probs=132.5

Q ss_pred             CCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC-CccccceEEEEEeeCcccc
Q psy16044        272 WPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       272 ~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~-~~~~~l~~~~~~~~~~~~C  350 (436)
                      | .|+.....||||||+|++|+.++...++|||||.... ....++.|+++|||.+.... ..+..|+++.+++++.++|
T Consensus        75 h-~y~~~~~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C  152 (235)
T 3h7t_A           75 V-RYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLY-DPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSC  152 (235)
T ss_dssp             C-SCBTTTTBTCCEEEEESSCCCCCSSSCCCCBCCCTTC-CCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHH
T ss_pred             e-ecCCCCCCCCeEEEEeccccccCCccccceecCcccc-CCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHH
Confidence            5 6677788899999999999999983399999998764 45789999999999987655 5678999999999999999


Q ss_pred             ccccCCC---ccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHH
Q psy16044        351 RDKYGDS---VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       351 ~~~~~~~---~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~  427 (436)
                      +..+...   ..+.++|||++...+..+.|.|||||||++++   +  |+||+||+.+|.. +.|++||||++|++||++
T Consensus       153 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~---~--l~Gi~S~g~~C~~-~~p~vyt~v~~~~~WI~~  226 (235)
T 3h7t_A          153 EEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNG---T--LVGVASYISSMPS-EFPSVFLRVGYYVLDIKD  226 (235)
T ss_dssp             HHHHHTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEETT---E--EEEEECCCTTCCT-TSCEEEEEGGGGHHHHHH
T ss_pred             HHHhhhcccCccccCCeEecCCCCCCCccccCCCCCceeeCC---e--EEEEEEecCCCCC-CCCceEEEHHHHHHHHHH
Confidence            9887542   23789999998877667999999999999843   2  9999999999987 789999999999999999


Q ss_pred             HHhhhh
Q psy16044        428 QINIAV  433 (436)
Q Consensus       428 ~i~~~~  433 (436)
                      +|+...
T Consensus       227 ~i~~~~  232 (235)
T 3h7t_A          227 IISGKV  232 (235)
T ss_dssp             HHTTCS
T ss_pred             HHhCCc
Confidence            998654


No 148
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.96  E-value=4.7e-29  Score=254.76  Aligned_cols=157  Identities=32%  Similarity=0.632  Sum_probs=121.9

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+.....||||||+|++|+.++.. |+|||||.... ....++.|+++|||.+......+..|+++.+++++.++|
T Consensus       468 ~Hp~y~~~~~~nDIALlkL~~pv~~~~~-v~PicLp~~~~-~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C  545 (625)
T 2f83_A          468 IHDQYKMAESGYDIALLKLETTVNYTDS-QRPICLPSKGD-RNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEEC  545 (625)
T ss_dssp             ECTTCCBTTTBCCCEEEEESSCCCCBTT-BCCCBCCCGGG-TTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHH
T ss_pred             ECCccCcCCccccEEEEEECCcccCCCc-eeeeEcCCccC-CccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHH
Confidence            4999998889999999999999999988 99999997654 345678999999998876555678899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +..+... .+++.|||++...++.+.|.|||||||++.. +++|+|+||+|||.+|+..+.|+|||||+.|++||+++|+
T Consensus       546 ~~~~~~~-~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~-~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~~~~  623 (625)
T 2f83_A          546 QKRYRGH-KITHKMICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ  623 (625)
T ss_dssp             HTTCTTS-CCCTTBCCC----------CCCTTCEEEEEE-TTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHHTC-
T ss_pred             HHHhccC-CCCCCeEEeecCCCCCcCCCCCcccceEEEE-CCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            9887542 4789999998766667899999999999985 7899999999999999877889999999999999999886


Q ss_pred             h
Q psy16044        431 I  431 (436)
Q Consensus       431 ~  431 (436)
                      .
T Consensus       624 ~  624 (625)
T 2f83_A          624 A  624 (625)
T ss_dssp             -
T ss_pred             c
Confidence            3


No 149
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.95  E-value=7.4e-29  Score=241.73  Aligned_cols=156  Identities=26%  Similarity=0.462  Sum_probs=124.1

Q ss_pred             CCCccccc---ccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCc
Q psy16044        271 AWPWQNLI---TSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNI  347 (436)
Q Consensus       271 ~~p~~~~~---~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~  347 (436)
                      .||.|+..   ...||||||||++|+.++.. |+|||||.... ....+..++++|||.+..  ..+..|+++.+++++.
T Consensus       236 ~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~-v~picLp~~~~-~~~~~~~~~v~GwG~~~~--~~~~~L~~~~~~i~~~  311 (399)
T 1gpz_A          236 VHPDYRQDESYNFEGDIALLELENSVTLGPN-LLPICLPDNDT-FYDLGLMGYVSGFGVMEE--KIAHDLRFVRLPVANP  311 (399)
T ss_dssp             ECSSCCSSSSSCCTTCCEEEEESSCCCCBTT-BCCCBCCCSGG-GGCTTCEEEEEECC-------CCSBCEEEEEEEECH
T ss_pred             ECCCCCcCCCCCCCCcEEEEEECCcCcCCCc-eeeeecCCCcc-ccCCCCEEEEEccCCCCC--ccCccceEEEEEEcCH
Confidence            48999753   56799999999999999988 99999997654 334688999999998763  3467899999999999


Q ss_pred             cccccccCCC---ccCCCCceecccCCCCCCCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHH
Q psy16044        348 SVCRDKYGDS---VELHGGHLCGGQLDGFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       348 ~~C~~~~~~~---~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~  423 (436)
                      ++|++.+...   ..++++||||+...+..+.|+|||||||++.. .+++|+|+||+|||.+|+.  .|++||||+.|++
T Consensus       312 ~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~--~~~vyt~V~~y~~  389 (399)
T 1gpz_A          312 QACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVD  389 (399)
T ss_dssp             HHHHC-----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTT--TEEEEEEGGGGHH
T ss_pred             HHhhhhhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCC--CCeEEEEhHHhHH
Confidence            9999876431   23688999998765557899999999999976 4679999999999999975  3899999999999


Q ss_pred             HHHHHHhhh
Q psy16044        424 WIRKQINIA  432 (436)
Q Consensus       424 WI~~~i~~~  432 (436)
                      ||+++|+++
T Consensus       390 WI~~~~~~~  398 (399)
T 1gpz_A          390 WIKKEMEEE  398 (399)
T ss_dssp             HHHHHTC--
T ss_pred             HHHHHhccC
Confidence            999999764


No 150
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.95  E-value=2.1e-28  Score=219.49  Aligned_cols=147  Identities=34%  Similarity=0.667  Sum_probs=127.5

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCC-CccccceEEEEEeeCccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG-DLVSKLRQIRVPLHNISV  349 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~-~~~~~l~~~~~~~~~~~~  349 (436)
                      .||.|+.....||||||||++|+.++.. ++|||||....   ..++.|.++|||.+.... ..+..|+++.+++++.++
T Consensus        75 ~hp~y~~~~~~~DiALl~L~~~~~~~~~-v~picL~~~~~---~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~  150 (226)
T 1azz_A           75 VHENYNSFVISNDIAVIRLPVPVTLTAA-IATVGLPSTDV---GVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNAD  150 (226)
T ss_dssp             ECTTCBTTTTBSCCEEEECSSCCCCCSS-SCCCBCCSSCC---CTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHH
T ss_pred             ECCCCCCCCCCCceEEEEECCccccCCC-cccccCCCCCC---CCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhH
Confidence            5999998889999999999999999988 99999997664   678999999999876533 457789999999999999


Q ss_pred             cccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC--CCCCCCCCeEEEeCcccHHHHHH
Q psy16044        350 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS--GCAKSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       350 C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~--~c~~~~~p~v~t~V~~~~~WI~~  427 (436)
                      |+..+.   .+++.|||++. .+..+.|.|||||||+++   +  +|+||+|||.  +|.. +.|++||||+.|++||++
T Consensus       151 C~~~~~---~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~~C~~-~~p~vyt~V~~~~~WI~~  220 (226)
T 1azz_A          151 CDAVYG---IVTDGNICIDS-TGGKGTCNGDSGGPLNYN---G--LTYGITSFGAAAGCEA-GYPDAFTRVTYFLDWIQT  220 (226)
T ss_dssp             HHHHHS---CCCTTEEEECC-TTTCBCCTTCTTCEEEET---T--EEEEEEEEEETTCTTS-CCCEEEEESGGGHHHHHH
T ss_pred             hhhhhC---cCCCceEeecC-CCCCccCCCCCCcceEEC---C--EEEEEEEEECCCCCCC-CCCCEEEEHHHHHHHHHH
Confidence            998875   36899999976 344689999999999963   3  7999999997  5654 679999999999999999


Q ss_pred             HHhh
Q psy16044        428 QINI  431 (436)
Q Consensus       428 ~i~~  431 (436)
                      +|+.
T Consensus       221 ~~~~  224 (226)
T 1azz_A          221 QTGI  224 (226)
T ss_dssp             HHCC
T ss_pred             HhCC
Confidence            9875


No 151
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.95  E-value=1.8e-28  Score=219.99  Aligned_cols=148  Identities=30%  Similarity=0.516  Sum_probs=129.1

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  350 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C  350 (436)
                      .||.|+..+..||||||||++|+.++.. ++|||||.... ....+..|+++|||.+......+..|+++.+++++.++|
T Consensus        77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~-v~pi~l~~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C  154 (224)
T 3rp2_A           77 IHESYNSVPNLHDIMLLKLEKKVELTPA-VNVVPLPSPSD-FIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKAC  154 (224)
T ss_dssp             ECTTCCSSSCCSCCEEEEESSCCCCBTT-BCCCCCCCTTC-CCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGT
T ss_pred             ECCCccCCCCCccEEEEEcCCCcccCCc-ccceecCCccc-CCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHh
Confidence            5899999889999999999999999988 99999997765 456789999999998876555677899999999999999


Q ss_pred             ccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        351 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       351 ~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      +.. ..  ...+.+||++......+.|.|||||||++..     +|+||+|||..|+..  |++||||+.|++||+++|+
T Consensus       155 ~~~-~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~--p~vyt~v~~y~~WI~~~i~  224 (224)
T 3rp2_A          155 VDY-RY--YEYKFQVCVGSPTTLRAAFMGDSGGPLLCAG-----VAHGIVSYGHPDAKP--PAIFTRVSTYVPWINAVIN  224 (224)
T ss_dssp             TTT-TC--CCTTTEEEECCTTSCCBCCTTTTTCEEEETT-----EEEEEEEECCTTCCS--CEEEEEHHHHHHHHHHHHC
T ss_pred             ccc-cc--cCcCCEEEecCCCCCCeeccCCCCCeEEEcc-----eeeEEEEECCCCCCC--CcEEEEHHHhHHHHHHHhC
Confidence            873 22  3578899998776667999999999999942     699999999988764  9999999999999999874


No 152
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.95  E-value=2.5e-28  Score=219.65  Aligned_cols=148  Identities=23%  Similarity=0.378  Sum_probs=129.0

Q ss_pred             cccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccc
Q psy16044        274 WQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDK  353 (436)
Q Consensus       274 ~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~  353 (436)
                      .|+..+..||||||+|++|+.++...++|||||.... ....++.|.++|||.+......+..|+++.+++++.++|+..
T Consensus        80 ~y~~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~  158 (228)
T 3h7o_A           80 FYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEF-RPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTK  158 (228)
T ss_dssp             SCBTTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTC-CCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHH
T ss_pred             ccCCCCccCCEEEEEECCcccccccccccccCCcccc-CCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHH
Confidence            6777788999999999999999983399999998764 457889999999999877666678899999999999999998


Q ss_pred             cCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHhh
Q psy16044        354 YGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQINI  431 (436)
Q Consensus       354 ~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~  431 (436)
                      +... .+.++|||++...  .+.|.|||||||+++.     .|+||+||+..|.. +.|++||||+.|++||+++|++
T Consensus       159 ~~~~-~~~~~~~Ca~~~~--~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~-~~p~vyt~v~~~~~WI~~~i~~  227 (228)
T 3h7o_A          159 YGPI-FLSLQVFCAQKVG--VSLESGDAGDPTVQQD-----TLVGVAAYFPKRPE-GAPEVFTKVGSYVSWIQDIIKK  227 (228)
T ss_dssp             HTTS-CCCSSEEEEECTT--CCCCGGGTTCEEEETT-----EEEEEECCCTTCCT-TCCEEEEEGGGTHHHHHHHHTT
T ss_pred             hcCc-cCCceEEecCCCC--CcCCCCCCCCcceecC-----eEEEEEeecCcCCC-CCCcEEEEHHHHHHHHHHHhhc
Confidence            8652 4689999997654  6899999999999843     39999999998887 7799999999999999999975


No 153
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.95  E-value=1.6e-27  Score=214.55  Aligned_cols=151  Identities=25%  Similarity=0.455  Sum_probs=127.0

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCC-CCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKR-PVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISV  349 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~-~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~  349 (436)
                      .||.|+.....||||||+|+ |+.++.. ++|||||..... ....+..|.++|||.+...   ...|+++.+++++.++
T Consensus        76 ~hp~y~~~~~~~DiALl~L~-~~~~~~~-v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~---~~~l~~~~~~~~~~~~  150 (230)
T 2hlc_A           76 SHSMFNPDTYLNDVALIKIP-HVEYTDN-IQPIRLPSGEELNNKFENIWATVSGWGQSNTD---TVILQYTYNLVIDNDR  150 (230)
T ss_dssp             ECTTCBTTTTBTCCEEEECS-CCCCCSS-CCCCBCCCGGGGGCCCTTCEEEEEESSCCSSC---CCBCEEEEEEEECHHH
T ss_pred             ECCCCCCCCccccEEEEEec-CCCcCCc-EeeeEcCCccccccccCCcEEEEEeeeecCCC---CceeEEEEEEEeCHHH
Confidence            49999998999999999999 9999888 999999976542 2357889999999987543   2679999999999999


Q ss_pred             cccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC--CCCCCCCCeEEEeCcccHHHHHH
Q psy16044        350 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS--GCAKSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       350 C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~--~c~~~~~p~v~t~V~~~~~WI~~  427 (436)
                      |++.+... .+.+.|||++.. .+.+.|.|||||||++..   +++|+||+||+.  +| ..+.|.+||||++|++||++
T Consensus       151 C~~~~~~~-~~~~~~~Ca~~~-~~~~~C~GDSGgPl~~~~---~~~l~Gi~S~g~~~~C-~~~~p~vyt~V~~~~~WI~~  224 (230)
T 2hlc_A          151 CAQEYPPG-IIVESTICGDTS-DGKSPCFGDSGGPFVLSD---KNLLIGVVSFVSGAGC-ESGKPVGFSRVTSYMDWIQQ  224 (230)
T ss_dssp             HHTTSCTT-SSCTTEEEECCT-TSCBCCTTCTTCEEEEGG---GTEEEEEEEECCTTCT-TSCCCEEEEEGGGGHHHHHH
T ss_pred             hhhhhCCC-cccCCeEEecCC-CCCCcCCCCCCCeeEECc---CCEEEEEEEEeCCCCC-CCCCCCEEEEhHHhHHHHHH
Confidence            99887542 468899999764 346899999999999853   348999999987  67 44679999999999999999


Q ss_pred             HHhhh
Q psy16044        428 QINIA  432 (436)
Q Consensus       428 ~i~~~  432 (436)
                      +++..
T Consensus       225 ~~~~~  229 (230)
T 2hlc_A          225 NTGIK  229 (230)
T ss_dssp             HHCCC
T ss_pred             hhCcC
Confidence            99764


No 154
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.95  E-value=9.9e-28  Score=226.38  Aligned_cols=150  Identities=20%  Similarity=0.279  Sum_probs=129.4

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCC--CCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADK--RPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~--~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      .||.|+..+..||||||||++|+.++.. |+|||||....  ..+..++.++++|||.  .....+..|+++.+++++.+
T Consensus       166 ~Hp~y~~~~~~~DIALl~L~~pv~~~~~-v~picLp~~~~~~~~~~~~~~~~v~GwG~--~~~~~~~~L~~~~v~~~~~~  242 (317)
T 3h5c_B          166 VHMRYDADAGENDLSLLELEWPIQCPGA-GLPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTRPVTLVEGE  242 (317)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCTTTS-CCCCBCCCHHHHHHTTTTTSCEEEEBCCT--TCCSSSCCCBCCEEEEECHH
T ss_pred             ECCCCCCCCCCCCeEEEEeCCcccCCCC-ccceeCCCcccccccccCCCeEEEEecCC--CCCCCCccceEEEEEEECHH
Confidence            5899999899999999999999999988 99999997642  2346789999999998  33455788999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      +|++.+..  .++++|||++...   ..|.|||||||++.. +++|+|+||+||+. |+..+.|++||||+.|++||+++
T Consensus       243 ~C~~~~~~--~~~~~~~Ca~~~~---~~~~gDsGgPl~~~~-~~~~~l~Gi~S~g~-~~~~~~p~vyt~V~~y~~WI~~~  315 (317)
T 3h5c_B          243 ECGQVLNV--TVTTRTYCERSSV---AAMHWMDGSVVTREH-RGSWFLTGVLGSQP-VGGQAHMVLVTKVSRYSLWFKQI  315 (317)
T ss_dssp             HHHHHHTC--CCCTTEEEEECSC---CCCCCCTTCEEEEEE-TTEEEEEEEECCCC-SSCCTTEEEEEEGGGCHHHHHHH
T ss_pred             HHhhhhcC--cCCCceeECCCCC---CCcCCCCCCCEEEec-CCEEEEEEEEEECC-CCCCCcceEEEEhHHhHHHHHHH
Confidence            99998865  5789999997543   468899999999984 78999999999975 66667899999999999999998


Q ss_pred             Hh
Q psy16044        429 IN  430 (436)
Q Consensus       429 i~  430 (436)
                      |+
T Consensus       316 i~  317 (317)
T 3h5c_B          316 MN  317 (317)
T ss_dssp             HC
T ss_pred             hC
Confidence            74


No 155
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.95  E-value=3.4e-27  Score=210.53  Aligned_cols=139  Identities=28%  Similarity=0.586  Sum_probs=120.8

Q ss_pred             CCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccc
Q psy16044        272 WPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCR  351 (436)
Q Consensus       272 ~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~  351 (436)
                      | .|+.....||||||||++|+.++.. ++|||||.... ....+..|.++|||.+......+..|+++.++++ .+.|+
T Consensus        78 h-~y~~~~~~~DIALl~L~~~~~~~~~-v~picL~~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~  153 (218)
T 2z7f_E           78 N-GYDPVNLLNDIVILQLNGSATINAN-VQVAQLPAQGR-RLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCR  153 (218)
T ss_dssp             S-CCBTTTTBSCCEEEEESSCCCCSSS-CCCCCCCCTTC-CCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCC
T ss_pred             c-CCCCCCCCCCEEEEEECCcCcCCCc-eeccCcCCCCC-CCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcC
Confidence            5 7777778899999999999999988 99999997765 3467899999999998766666788999999999 89997


Q ss_pred             cccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEe--cCCCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        352 DKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSF--GSGCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       352 ~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~--~~~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      ..          |||++...+..+.|.|||||||++++     +|+||+||  +. |+....|++||||+.|++||+++|
T Consensus       154 ~~----------~~Ca~~~~~~~~~C~GDSGgPl~~~~-----~l~Gi~S~~~g~-C~~~~~p~vyt~V~~~~~WI~~~~  217 (218)
T 2z7f_E          154 RS----------NVCTLVRGRQAGVCFGDSGSPLVCNG-----LIHGIASFVRGG-CASGLYPDAFAPVAQFVNWIDSII  217 (218)
T ss_dssp             TT----------SEEEECTTSCCBCCTTCTTCEEEETT-----EEEEEEEEESSS-TTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred             cc----------eeeeccCCCCCeeCCCcCCCceEEcc-----EEEEEEEeCCcc-CCCCCCCeEEEEHHHhHHHHHHHh
Confidence            64          89998766567899999999999842     69999999  65 887677999999999999999987


Q ss_pred             h
Q psy16044        430 N  430 (436)
Q Consensus       430 ~  430 (436)
                      +
T Consensus       218 ~  218 (218)
T 2z7f_E          218 Q  218 (218)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 156
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.94  E-value=4.4e-27  Score=210.92  Aligned_cols=141  Identities=28%  Similarity=0.562  Sum_probs=122.9

Q ss_pred             CCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccc
Q psy16044        272 WPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCR  351 (436)
Q Consensus       272 ~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~  351 (436)
                      | .|+.....||||||+|++|+.++.. ++|||||.... ....+..|.++|||.+......+..|+++.+++++.++|+
T Consensus        79 h-~y~~~~~~~DIALl~L~~~~~~~~~-v~pi~L~~~~~-~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~  155 (225)
T 1a7s_A           79 N-GYDPQQNLNDLMLLQLDREANLTSS-VTILPLPLQNA-TVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCR  155 (225)
T ss_dssp             S-SCBTTTTBSCCEEEEESSCCCCBTT-BCCCCCCCTTC-CCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSC
T ss_pred             c-cccCCCCcCCEEEEEcCCcccCCCc-eeEEEcCCCcC-CCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhc
Confidence            5 6777778899999999999999987 99999997765 4467899999999998766666789999999999999997


Q ss_pred             cccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEec-CCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        352 DKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFG-SGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       352 ~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~-~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      .          +|+|++...+..+.|.|||||||++.   +  +|+||+||| ..|+..  |++||||+.|++||+++|+
T Consensus       156 ~----------~~~Ca~~~~~~~~~C~GDSGgPl~~~---g--~l~Gi~S~g~~~C~~~--p~vyt~V~~~~~WI~~~~~  218 (225)
T 1a7s_A          156 P----------NNVCTGVLTRRGGICNGDGGTPLVCE---G--LAHGVASFSLGPCGRG--PDFFTRVALFRDWIDGVLN  218 (225)
T ss_dssp             T----------TEEEEECSSSSCBCCTTCTTCEEEET---T--EEEEEEEEECSSTTSS--CEEEEEGGGGHHHHHHHHH
T ss_pred             c----------CceEEeccCCCCCcccCCCcchheeC---C--EEEEEEEEccCCcCCC--CcEEEEhHHhHHHHHHHhc
Confidence            6          69999876656789999999999995   2  799999999 678764  9999999999999999997


Q ss_pred             hh
Q psy16044        431 IA  432 (436)
Q Consensus       431 ~~  432 (436)
                      ..
T Consensus       219 ~~  220 (225)
T 1a7s_A          219 NP  220 (225)
T ss_dssp             SC
T ss_pred             CC
Confidence            54


No 157
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=99.94  E-value=3.3e-27  Score=197.84  Aligned_cols=139  Identities=32%  Similarity=0.628  Sum_probs=116.7

Q ss_pred             CCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCC---CccccceeeeeeccchhhhhhhcC
Q psy16044        120 NYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKG---DLVSKLRQIRVPLHNISVCRDKYG  196 (436)
Q Consensus       120 ~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~---~~~~~l~~~~~~~~~~~~C~~~~~  196 (436)
                      +..||||||||++|+. ++.+++|||||....   ..+..++++|||.+...+   ..+..|+++.+++++.+.|+..+.
T Consensus         5 ~~~nDIALl~L~~~v~-~~~~v~picLp~~~~---~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~   80 (152)
T 2pka_B            5 DYSHDLMLLRLQSPAK-ITDAVKVLELPTQEP---ELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHP   80 (152)
T ss_dssp             BCTTCCEEEEESSCCC-CCSSCCCCCCCSSCC---CTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCS
T ss_pred             CCCCCEEEEEECCCCc-CCCCEEeEECCCCCC---CCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhc
Confidence            4579999999999999 788899999998532   358899999999988665   567889999999999999999875


Q ss_pred             CCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC---CCcccccccceecCCccccC
Q psy16044        197 DSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG---VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       197 ~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~---~~~~y~~v~~~~~~~~~~~~  269 (436)
                      .  ...+.||||+...+..++|.|||||||++.   +  +|+||+|||...|+   .+.+|++|.+|..||.+.+.
T Consensus        81 ~--~~~~~~iCa~~~~~~~~~C~GDsGgPL~~~---g--~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~  149 (152)
T 2pka_B           81 D--KVTESMLCAGYLPGGKDTCMGDSGGPLICN---G--MWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT  149 (152)
T ss_dssp             S--BCCTTEEEEECTTSSCBCCTTCTTCEEEET---T--EEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             C--CCCCCEEeeccCCCCCcccCCccccceEEC---C--EEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence            4  346799999976666899999999999985   2  59999999943464   36899999999999987653


No 158
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.94  E-value=2.8e-26  Score=205.11  Aligned_cols=139  Identities=35%  Similarity=0.688  Sum_probs=119.8

Q ss_pred             cccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccc
Q psy16044        274 WQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDK  353 (436)
Q Consensus       274 ~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~  353 (436)
                      .|+.....+|||||+|++|+.++.. ++|||||.... ....++.|.++|||.+......+..|+++.++++ .+.|+..
T Consensus        82 ~y~~~~~~~DiALl~L~~~~~~~~~-v~picL~~~~~-~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~~  158 (221)
T 1fuj_A           82 NYDAENKLNDILLIQLSSPANLSAS-VATVQLPQQDQ-PVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCRPH  158 (221)
T ss_dssp             CCBTTTTBCCCEEEEESSCCCCCSS-CCCCBCCCTTC-CCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCCTT
T ss_pred             CCCCCCCcccEEEEEeCCccccCCc-ceeeECCCCcC-CCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecCCc
Confidence            6666778899999999999999988 99999998765 4567899999999998766666788999999999 8888753


Q ss_pred             cCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC-CCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        354 YGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       354 ~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~-~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                                |+|++...+..+.|.|||||||+++   +  +|+||+||+. +|+..+.|++||||++|++||+++|+
T Consensus       159 ----------~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i~  221 (221)
T 1fuj_A          159 ----------NICTFVPRRKAGICFGDSGGPLICD---G--IIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR  221 (221)
T ss_dssp             ----------EEEEECSSSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             ----------eeeeccCCCCCCCCCCCCCCeeEEC---C--EEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHhC
Confidence                      8999876656789999999999993   2  6999999964 48877789999999999999999885


No 159
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.94  E-value=1e-26  Score=213.18  Aligned_cols=198  Identities=14%  Similarity=0.054  Sum_probs=132.5

Q ss_pred             cCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEE
Q psy16044         33 SIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERI  112 (436)
Q Consensus        33 a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i  112 (436)
                      +..++|||++.+........ ..++|+|+||+++||||||||+....   .....+.|++|..........  .+.+.++
T Consensus        12 ~~~~~~P~~~~v~l~~~~~~-g~~~CgG~lI~~~~VLTAAHCv~~~~---~~~~~i~V~~G~~~~~~~~~g--~~~~~~i   85 (268)
T 1wcz_A           12 TDTTNGHYAPVTYIQVEAPT-GTFIASGVVVGKDTLLTNKHVVDATH---GDPHALKAFPSAINQDNYPNG--GFTAEQI   85 (268)
T ss_dssp             SCTTSGGGTTEEEEEEEC-C-CEEEEEEEECSSSEEEECHHHHGGGT---TCGGGEEEEETCCBTTBCTTC--CEEEEEE
T ss_pred             cCCCCCCccEEEEEEEEcCC-CCEEEEEEEEECCEEEEChhhCCCcc---CCcceEEEEecccCcccccCC--cEEEEEE
Confidence            56688898876443321111 15899999999999999999996531   112458899997765432222  3567778


Q ss_pred             EeCCCCCCCCCceeEEEeCCCCC--CCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhh
Q psy16044        113 RVHEEFHNYHHDIALLKLSRPTS--ARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISV  190 (436)
Q Consensus       113 ~~hp~y~~~~~DiAll~L~~~~~--~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~  190 (436)
                      +.|+.    .+|||||||++++.  .++..++|+||+..  .....+..++++|||....     ..++.....++..  
T Consensus        86 ~~~~~----~~DIALLkL~~~~~~~~~~~~v~pi~L~~~--~~~~~g~~v~v~Gwg~~~~-----~~~~~~~~g~i~~--  152 (268)
T 1wcz_A           86 TKYSG----EGDLAIVKFSPNEQNKHIGEVVKPATMSNN--AETQVNQNITVTGYPGDKP-----VATMWESKGKITY--  152 (268)
T ss_dssp             EECSS----SSCCEEEEECCCTTSCCHHHHSCCCCBCCC--SSCCTTCEEEEEECCTTSS-----TTCEEEEEEEEEE--
T ss_pred             ecCCC----CCcEEEEEecCcccccccccccceeecccc--cccCCCCEEEEEECCCCCC-----CceEEeecceEEe--
Confidence            88763    58999999999973  13456899999863  2345789999999996542     1233333332221  


Q ss_pred             hhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCCccccC
Q psy16044        191 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       191 C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~~~~~~  269 (436)
                                ....++|.+     .++|.|||||||++.  +  +.|+||+|||.+|+. ...|..+..+..||.+.+.
T Consensus       153 ----------~~~~~i~~~-----~~~c~GdSGGPLv~~--~--g~lvGIvS~G~~~~~-~~~~~~~~~~~~wI~~~i~  211 (268)
T 1wcz_A          153 ----------LKGEAMQYD-----LSTTGGNSGSPVFNE--K--NEVIGIHWGGVPNEF-NGAVFINENVRNFLKQNIE  211 (268)
T ss_dssp             ----------EETTEEEES-----BCCCTTCTTCEEECT--T--SCEEEEEEEEETTTE-EEEEECCHHHHHHHHHHCT
T ss_pred             ----------eCCCeEEEe-----cccCCCCccCeEEcc--C--CEEEEEEeCCccCCc-ceeEEcCHHHHHHHHHHHH
Confidence                      113577763     689999999999963  2  359999999987443 3334445667888876554


No 160
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.93  E-value=2.2e-26  Score=211.72  Aligned_cols=198  Identities=14%  Similarity=0.056  Sum_probs=131.5

Q ss_pred             cCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEE
Q psy16044         33 SIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERI  112 (436)
Q Consensus        33 a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i  112 (436)
                      +..++|||++.++....... ..++|+|+||+++||||||||+....   .....+.|++|..........  .+.+.++
T Consensus        12 ~~~~~~P~~~~v~i~~~~~~-~~~~C~G~lI~~~~VLTAAHCv~~~~---~~~~~i~V~~G~~~~~~~~~g--~~~~~~i   85 (274)
T 2o8l_A           12 TDTTNGHYAPVTYIQVEAPT-GTFIASGVVVGKDTLLTNKHVVDATH---GDPHALKAFPSAINQDNYPNG--GFTAEQI   85 (274)
T ss_dssp             SSTTSGGGTTEEEEEEEETT-EEEEEEEEEEETTEEEECHHHHHTTT---TCGGGEEEEETCCBTTBCTTC--CEEEEEE
T ss_pred             cCCCCCCcceEEEEEEEcCC-CCEEEEEEEEECCEEEEChhhCcccC---CCcceEEEEecccCcccccCc--cEEEEEE
Confidence            55678888866443211111 15899999999999999999996531   112458899997654332222  3567888


Q ss_pred             EeCCCCCCCCCceeEEEeCCCCC--CCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhh
Q psy16044        113 RVHEEFHNYHHDIALLKLSRPTS--ARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISV  190 (436)
Q Consensus       113 ~~hp~y~~~~~DiAll~L~~~~~--~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~  190 (436)
                      +.|+.    .+|||||||++++.  .++..++|+||+..  .....+..++++|||.....     .++.....++..  
T Consensus        86 ~~~~~----~~DIALLkL~~~~~~~~~~~~v~pi~L~~~--~~~~~g~~v~v~Gwg~~~~~-----~~~~~~~g~i~~--  152 (274)
T 2o8l_A           86 TKYSG----EGDLAIVKFSPNEQNKHIGEVVKPATMSNN--AETQTNQNITVTGYPGDKPV-----ATMWESKGKITY--  152 (274)
T ss_dssp             EECSS----SSCCEEEEECCCTTSCCTTTSSCCCEECCC--TTCCTTCEEEEEECCTTSST-----TCEEEEEEEEEE--
T ss_pred             EeCCC----CCcEEEEEecCccccccccccccccccccc--ccccCCCEEEEEECCCCCCC-----ceEEecCceEEe--
Confidence            88864    58999999999973  24667999999863  23457899999999965421     122222222211  


Q ss_pred             hhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCCcccccccceecCCccccC
Q psy16044        191 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       191 C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~~~y~~v~~~~~~~~~~~~  269 (436)
                                ....++|..     .++|.|||||||++.  +  +.|+||+|||.+|+. ...|..+..+..||.+.+.
T Consensus       153 ----------~~~~~i~~~-----~~~c~GdSGGPLv~~--~--g~lvGIvS~G~~~~~-~~~~~~~~~~~~wI~~~i~  211 (274)
T 2o8l_A          153 ----------LKGEAMQYD-----LSTTGGNSGSPVFNE--K--NEVIGIHWGGVPNEF-NGAVFINENVRNFLKQNIE  211 (274)
T ss_dssp             ----------EETTEEEES-----CCCCTTCTTCEEECT--T--SCEEEEEEEEETTTE-EEEEECCHHHHHHHHHHCT
T ss_pred             ----------cCCCeEEeC-----cccCCCCchhheecc--C--CeEEEEEeCcccCCC-CceEEecHHHHHHHHHHHh
Confidence                      112566653     689999999999963  2  359999999987543 3333345667788876554


No 161
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.93  E-value=8.1e-27  Score=212.19  Aligned_cols=179  Identities=16%  Similarity=0.141  Sum_probs=116.9

Q ss_pred             CeeeEEEEecC------CEEEecCCCcCCCCCCCCCCcceEEEeccccCCccC-----------CceEEEeeeEEEeCCC
Q psy16044         55 PHWCGAVLIHP------SWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEE-----------KSEVRIPVERIRVHEE  117 (436)
Q Consensus        55 ~~~C~GtLIs~------~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~-----------~~~~~~~v~~i~~hp~  117 (436)
                      .|+|+|+||++      +||||||||+....   .....+.|.++........           .......+..++.|+.
T Consensus        33 ~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~---~~~~~~~v~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~i~h~~  109 (268)
T 1arb_A           33 TLACTGSLVNNTANDRKMYFLTAHHCGMGTA---STAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSGSTVKATY  109 (268)
T ss_dssp             EEEEEEEEBCCTTCCCCCEEEEEGGGSCCSH---HHHHTCEEEESCCCSSCCCTTSGGGGSCCCCCCCCEEECEEEEEEE
T ss_pred             ccEEeEEEEcCCCCCCCCEEEEcHHhCCCcc---CcceEEEEEeCCCCCccccccccccccccCCcceEEeccceEecCC
Confidence            68999999998      69999999986410   0123467777653321110           0111123677788883


Q ss_pred             CCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCcc--ccceeeeeeccchhhhhh--
Q psy16044        118 FHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLV--SKLRQIRVPLHNISVCRD--  193 (436)
Q Consensus       118 y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~--~~l~~~~~~~~~~~~C~~--  193 (436)
                         ..||||||||++|+.                    .+..++++|||.+.......  ..++...++.++...|..  
T Consensus       110 ---~~nDIALLrL~~~v~--------------------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l~~i~~~~~~~~~  166 (268)
T 1arb_A          110 ---ATSDFTLLELNNAAN--------------------PAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNSTSPTSF  166 (268)
T ss_dssp             ---TTTTEEEEEESSCCC--------------------GGGCCEEBCEECCSCCCSCEEEEECGGGCSCEEEEECSCCEE
T ss_pred             ---CCCceEEEEecCCCC--------------------CCCceEEeCcCccCCCCCcceeeccCCcccEEEEeecccccc
Confidence               579999999998753                    12346899999987543311  112233455566666652  


Q ss_pred             -hcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC-----CcccccccceecCCc
Q psy16044        194 -KYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV-----GIRYSHRQPRLINGK  265 (436)
Q Consensus       194 -~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~-----~~~y~~v~~~~~~~~  265 (436)
                       .|..  ...+.|+|++...+..++|.|||||||++.    .++|+||+|||...|+.     +.+|++|..+...+.
T Consensus       167 ~~~~~--~~~~~~iCag~~~~~gdtC~gdsGgPl~~~----~~~~~Gi~s~g~~~C~~~~~~~p~vyt~v~~~~~~~~  238 (268)
T 1arb_A          167 VAWGG--GAGTTHLNVQWQPSGGVTEPGSSGSPIYSP----EKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGG  238 (268)
T ss_dssp             ECTTS--SSCSSEEEEECCTTSCCCCTTCTTCEEECT----TSCEEEEEEECSCCTTCCGGGSEEEEEEHHHHHHTTS
T ss_pred             ccccc--cccCCeEEEeeecCCCCCccCcccCCcEee----CCEEEEEEeecCcccCCCCCCCCceEEEeeeeeccCC
Confidence             2321  234689999754222479999999999973    24599999999866863     578999987766553


No 162
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.93  E-value=6.2e-26  Score=205.59  Aligned_cols=179  Identities=17%  Similarity=0.118  Sum_probs=122.0

Q ss_pred             ccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccC--CceEEEee
Q psy16044         32 ESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEE--KSEVRIPV  109 (436)
Q Consensus        32 ~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~--~~~~~~~v  109 (436)
                      ++..++|||++.+......    .++|+|+||+++||||||||+.....   ....+.+..|........  ...+.+.+
T Consensus        35 ~a~~~~~p~~~~v~i~~~~----~~~c~G~lI~~~~VLTAaHcv~~~~~---~~~~v~~~~G~~~~~~~~~~~~~~~~~~  107 (242)
T 1agj_A           35 EKDRQKYPYNTIGNVFVKG----QTSATGVLIGKNTVLTNRHIAKFANG---DPSKVSFRPSINTDDNGNTETPYGEYEV  107 (242)
T ss_dssp             TTGGGSTTGGGEEEEEETT----TEEEEEEECSSSEEEECHHHHGGGTT---CGGGEEEEETCEECTTSCEECTTCCEEE
T ss_pred             cccccccccceEEEEEECC----CccEEEEEEeCCEEEEChhhcccCCC---CceEEEEecCccccccccccccCCceeE
Confidence            4778899999776554311    58999999999999999999965311   112344444765432110  01134667


Q ss_pred             eEEEeCCCCCCCCCceeEEEeCCCCCC--CCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccc
Q psy16044        110 ERIRVHEEFHNYHHDIALLKLSRPTSA--RDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHN  187 (436)
Q Consensus       110 ~~i~~hp~y~~~~~DiAll~L~~~~~~--~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~  187 (436)
                      +.+..|| |+ ..+|||||||+.|+..  ++..++|+||+..  .....+..++++|||.....    ..++...+.+++
T Consensus       108 ~~i~~~~-~~-~~~DiAll~l~~~~~~~~~~~~v~~i~L~~~--~~~~~g~~~~v~Gwg~~~~~----~~l~~~~~~~~~  179 (242)
T 1agj_A          108 KEILQEP-FG-AGVDLALIRLKPDQNGVSLGDKISPAKIGTS--NDLKDGDKLELIGYPFDHKV----NQMHRSEIELTT  179 (242)
T ss_dssp             EEEESCT-TC-TTSCCEEEEECCCTTSCCHHHHSCCCEECCS--TTCCTTCEEEEEECCTTTST----TCCEEEEEEECC
T ss_pred             EEEEeCC-CC-CCCcEEEEEEcCCCccccccccccceecCcc--ccCCCCCEEEEEeCCCCCCC----ccceeeeeeEec
Confidence            8888999 75 5789999999999641  2346899999863  23457899999999976532    245666665554


Q ss_pred             hhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC
Q psy16044        188 ISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC  248 (436)
Q Consensus       188 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C  248 (436)
                      ..              ..++..     .++|.|||||||++.  ++  .|+||+|||.+|+
T Consensus       180 ~~--------------~~~~~~-----~~~c~GdSGGPl~~~--~g--~lvGI~s~g~~c~  217 (242)
T 1agj_A          180 LS--------------RGLRYY-----GFTVPGNSGSGIFNS--NG--ELVGIHSSKVSHL  217 (242)
T ss_dssp             GG--------------GSEEEE-----CCCCGGGTTCEEECT--TS--EEEEEEEEEEECS
T ss_pred             CC--------------ceEEEe-----CCcCCCCCchHhccc--CC--EEEEEEecccccc
Confidence            21              112221     468999999999963  23  6999999998844


No 163
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.91  E-value=1.9e-25  Score=224.15  Aligned_cols=160  Identities=24%  Similarity=0.402  Sum_probs=125.3

Q ss_pred             CCCccccc---------ccccccceeecccccccCCCCeeeeccCCCCC----CCCCCCCeEEEEecCCCCCCC------
Q psy16044        271 AWPWQNLI---------TSFLSAALLKLSRPTSARDKGVRAVCLTDADK----RPVNPKQQCVATGWGRVKPKG------  331 (436)
Q Consensus       271 ~~p~~~~~---------~~~~diali~l~~~~~~~~~~v~picl~~~~~----~~~~~~~~~~~~Gwg~~~~~~------  331 (436)
                      .||.|+..         +..||||||+|++|+.++.. |+|||||....    ...+.+..|++.|||......      
T Consensus       288 ~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~-v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~  366 (497)
T 1rrk_A          288 FHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQT-IRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFV  366 (497)
T ss_dssp             ECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCCCBTT-BCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEE
T ss_pred             eCCCccccccccccccccCCCcEEEEEECCCCcCCCC-eeeeeCCCCCccccccccCCCCchhcccccccCCccccceee
Confidence            58999864         56899999999999999988 99999997532    134568889999999654321      


Q ss_pred             -CccccceEEEEEeeC---cccccccc------CC----CccCCCCceecccCCC--CCCCccCCCCceeeeEecCCcEE
Q psy16044        332 -DLVSKLRQIRVPLHN---ISVCRDKY------GD----SVELHGGHLCGGQLDG--FSGACIGDSGGPLQCSLKDGRWY  395 (436)
Q Consensus       332 -~~~~~l~~~~~~~~~---~~~C~~~~------~~----~~~~~~~~~C~~~~~~--~~~~c~gdsGgpl~~~~~~~~~~  395 (436)
                       ..+..|+++.+++++   .++|++.+      ..    ...++++|||++...+  .++.|+|||||||+|.. +++|+
T Consensus       367 ~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~-~~~~~  445 (497)
T 1rrk_A          367 SEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHK-RSRFI  445 (497)
T ss_dssp             EESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEE-TTEEE
T ss_pred             ccCCCcceeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEe-CCEEE
Confidence             134679999999998   68998642      11    1137899999987543  36899999999999985 78999


Q ss_pred             EEEEEEecC--CCC----CCCCCe----EEEeCcccHHHHHHHHhhh
Q psy16044        396 LAGITSFGS--GCA----KSGYPD----VYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       396 l~Gi~S~~~--~c~----~~~~p~----v~t~V~~~~~WI~~~i~~~  432 (436)
                      |+||+|||.  +|+    ..+.|+    +||+|++|++||+++|+..
T Consensus       446 l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~~~  492 (497)
T 1rrk_A          446 QVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE  492 (497)
T ss_dssp             EEEEEEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTTS
T ss_pred             EEEEEEecCCCCCCCccccCCCCCccceeeeeHHHHHHHHHHHhCcc
Confidence            999999997  698    445675    9999999999999999754


No 164
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.91  E-value=2.3e-25  Score=195.90  Aligned_cols=185  Identities=16%  Similarity=0.056  Sum_probs=118.6

Q ss_pred             ccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeE
Q psy16044         32 ESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVER  111 (436)
Q Consensus        32 ~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~  111 (436)
                      .+..++|||+|++.         .++|+|+||+++||||||||+....     .....+.++....   ....+.+.+.+
T Consensus         7 i~~~~~~P~~v~~~---------~~~c~G~lI~~~~VLTaaHcv~~~~-----~~~~~v~v~~~~~---~~~~~~~~~~~   69 (200)
T 2w7s_A            7 ITDATKEPYNSVVA---------FVGGTGVVVGKNTIVTNKHIAKSND-----IFKNRVSAHHSSK---GKGGGNYDVKD   69 (200)
T ss_dssp             ESCTTSTTGGGEEE---------ETTEEEEEEETTEEEECHHHHHHHH-----HTTCCEEETCCSS---SCCCCEECEEE
T ss_pred             eeccccCCcccccc---------cceEEEEEEECCEEEEChhhcCCcc-----cCCcEEEEEecCc---cCCCcEEEEEE
Confidence            37789999999874         2469999999999999999985421     0012344443221   11224466666


Q ss_pred             EEeCCCCCCCCCceeEEEeCCC----CCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccc
Q psy16044        112 IRVHEEFHNYHHDIALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHN  187 (436)
Q Consensus       112 i~~hp~y~~~~~DiAll~L~~~----~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~  187 (436)
                      ++.+..    .+|||||||+.+    +. ++..++|+||+.    ....+..++++||+......    ..+.....+++
T Consensus        70 i~~~~~----~~DiAll~l~~~~~~~~~-~~~~v~pi~l~~----~~~~g~~v~v~G~p~g~~~~----~~~~~~~g~v~  136 (200)
T 2w7s_A           70 IVEYPG----KEDLAIVHVHETSTEGLN-FNKNVSYTKFAD----GAKVKDRISVIGYPKGAQTK----YKMFESTGTIN  136 (200)
T ss_dssp             EEECSS----SSSCEEEEECSBCTTSCB-GGGSCCCCCBCC----CCCTTCEEEEEECTTHHHHT----SCEEEEEEEEE
T ss_pred             EecCCC----cceEEEEEECCCCCCccc-ccccccceeccc----cCCCCCEEEEEECCCCCCCc----cceEEeEEEEE
Confidence            664432    589999999986    66 566799999973    24568899999986321110    01223333333


Q ss_pred             hhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC-CCC--cc-cccccceecC
Q psy16044        188 ISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC-GVG--IR-YSHRQPRLIN  263 (436)
Q Consensus       188 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C-~~~--~~-y~~v~~~~~~  263 (436)
                      .  +          ...++|..     .+.|.|||||||++.  ++  .|+||+|||.++| ...  .+ |+  ..+..|
T Consensus       137 ~--~----------~~~~~~~~-----~~~~~GdSGGPl~~~--~g--~lvGI~s~g~~~~~~~~~~~v~~~--~~~~~w  193 (200)
T 2w7s_A          137 H--I----------SGTFMEFD-----AYAQPGNSGSPVLNS--KH--ELIGILYAGSGKDESEKNFGVYFT--PQLKEF  193 (200)
T ss_dssp             E--E----------ETTEEEEC-----SCCCTTCTTCEEECT--TS--CEEEEEEEEC----CCCEEEEECC--HHHHHH
T ss_pred             c--c----------CCCEEEEc-----ceeCCCCccCeEECc--CC--EEEEEEeccccCCCCccceeeecH--HHHHHH
Confidence            2  1          12567763     578999999999963  23  5999999998753 322  33 44  667888


Q ss_pred             CccccC
Q psy16044        264 GKESIR  269 (436)
Q Consensus       264 ~~~~~~  269 (436)
                      |.+.+.
T Consensus       194 I~~~~~  199 (200)
T 2w7s_A          194 IQNNIE  199 (200)
T ss_dssp             HHHTSC
T ss_pred             HHhhcc
Confidence            876553


No 165
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.91  E-value=8.4e-25  Score=193.01  Aligned_cols=185  Identities=13%  Similarity=0.068  Sum_probs=119.2

Q ss_pred             ccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeE
Q psy16044         32 ESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVER  111 (436)
Q Consensus        32 ~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~  111 (436)
                      .+..++|||+|.+.         .++|+|+||+++||||||||+....    ....+.+..+. .  .  .....+.+.+
T Consensus         7 ~~~~~~~P~~~~~~---------~~~c~G~lI~~~~VLTaaHcv~~~~----~~~~v~v~~~~-~--~--~~~~~~~~~~   68 (204)
T 2vid_A            7 VKDTNIFPYTGVVA---------FKSATGFVVGKNTILTNKHVSKNYK----VGDRITAHPNS-D--K--GNGGIYSIKK   68 (204)
T ss_dssp             CSCTTSTTGGGEEE---------CSSCEEEEEETTEEEECHHHHTTCC----TTCEEEESCCS-S--S--CCSCEEEEEE
T ss_pred             eccCCcCchhheEE---------eeeEEEEEEECCEEEEChhHCCCcc----CCceEEEEecc-c--c--CCCcEEEeeE
Confidence            47789999999764         2469999999999999999996531    11223332211 1  1  1223466777


Q ss_pred             EEeCCCCCCCCCceeEEEeCC--------CCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeee
Q psy16044        112 IRVHEEFHNYHHDIALLKLSR--------PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRV  183 (436)
Q Consensus       112 i~~hp~y~~~~~DiAll~L~~--------~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~  183 (436)
                      ++.|+.    .+|||||||+.        ++. ++..++|+||+.    ....+..++++|||......   ..+. ...
T Consensus        69 i~~~~~----~~DiAll~l~~~~~~~~~~~~~-~~~~v~pi~l~~----~~~~g~~~~~~G~g~~~~~~---~~~~-~~~  135 (204)
T 2vid_A           69 IINYPG----KEDVSVIQVEERAIERGPKGFN-FNDNVTPFKYAA----GAKAGERIKVIGYPHPYKNK---YVLY-EST  135 (204)
T ss_dssp             EEECSS----SSCCEEEEECSEEEEEETTEEE-HHHHCCCCCBCS----CCCTTCEEEEEECCCCCC-----CCCE-EEE
T ss_pred             EecCCC----CCeEEEEEEcCccccccccccc-ccccccccccCC----cCCCCCEEEEEeCCCCCCCC---cceE-eec
Confidence            777653    57999999995        454 445689999975    24578899999999754221   1111 111


Q ss_pred             eccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC--CCCCC--cccccccc
Q psy16044        184 PLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG--YCGVG--IRYSHRQP  259 (436)
Q Consensus       184 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~--~C~~~--~~y~~v~~  259 (436)
                      ..+..            ....++|..     .++|.|||||||++.  +  +.|+||+|+|.+  .|...  .+|.. ..
T Consensus       136 g~v~~------------~~~~~~~~~-----~~~~~GdSGGPl~~~--~--g~lvGI~s~g~~~~~~~~~~~~~~~~-~~  193 (204)
T 2vid_A          136 GPVMS------------VEGSSIVYS-----AHTESGNSGSPVLNS--N--NELVGIHFASDVKNDDNRNAYGVYFT-PE  193 (204)
T ss_dssp             EEEEE------------EETTEEEEC-----CCCCGGGTTCEEECT--T--SCEEEEEEEECC---CCCCEEEECCC-HH
T ss_pred             cEEee------------ccCCeEEEe-----cccCCCCccCcEECC--C--CeEEEEEecCccCCCcccccceeEeC-HH
Confidence            11111            123678873     679999999999953  2  359999999985  34432  23333 66


Q ss_pred             eecCCccccC
Q psy16044        260 RLINGKESIR  269 (436)
Q Consensus       260 ~~~~~~~~~~  269 (436)
                      +..||.+.+.
T Consensus       194 ~~~wI~~~~~  203 (204)
T 2vid_A          194 IKKFIAENID  203 (204)
T ss_dssp             HHHHHHHHSC
T ss_pred             HHHHHHhhcC
Confidence            7888876543


No 166
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.90  E-value=8.1e-24  Score=191.86  Aligned_cols=177  Identities=18%  Similarity=0.177  Sum_probs=117.1

Q ss_pred             cCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCc-c--CCceEEEee
Q psy16044         33 SIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTE-E--EKSEVRIPV  109 (436)
Q Consensus        33 a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~-~--~~~~~~~~v  109 (436)
                      +..++|||++.+.....  +  .++|+|+||+++||||||||+.+...   ....+.+..|...... .  ......+.+
T Consensus        29 ~~~~~~P~~~~~~i~~~--~--~~~c~G~lI~~~~VLTAaHcv~~~~~---~~~~v~v~~G~~~~~~~~~~~~~~~~~~~  101 (246)
T 1qtf_A           29 TDNARSPYNSVGTVFVK--G--STLATGVLIGKNTIVTNYHVAREAAK---NPSNIIFTPAQNRDAEKNEFPTPYGKFEA  101 (246)
T ss_dssp             SCCSSTTGGGEEEEEET--T--TEEEEEEEEETTEEEECHHHHGGGTT---CGGGEEEEETCCCCTTTTCCCCTTCCEEE
T ss_pred             hhcCcCchhcEEEEEEC--C--CceEEEEEEECCEEEECHHhCCCCCC---CceEEEEecCccccccccccccCCceEEE
Confidence            56789999987543221  1  68999999999999999999965311   1245778888654321 0  001135678


Q ss_pred             eEEEeCCCCCCCCCceeEEEeCCCCC--CCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccc
Q psy16044        110 ERIRVHEEFHNYHHDIALLKLSRPTS--ARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHN  187 (436)
Q Consensus       110 ~~i~~hp~y~~~~~DiAll~L~~~~~--~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~  187 (436)
                      +.+..|| |+ ..+|||||+|+.++.  .++..++|++|+...  ....+..++++||+.....    ..+....+.+.+
T Consensus       102 ~~i~~hp-~~-~~~DiALLkl~~~~~~~~~~~~v~~i~L~~~~--~~~~g~~v~v~G~p~g~~~----~~~~~~~~~~~~  173 (246)
T 1qtf_A          102 EEIKESP-YG-QGLDLAIIKLKPNEKGESAGDLIQPANIPDHI--DIAKGDKYSLLGYPYNYSA----YSLYQSQIEMFN  173 (246)
T ss_dssp             EEEESCT-TC-TTSCCEEEEECCCTTSCCHHHHSCCCCCCSSC--CCCTTCEEEEEECCTTTST----TCCEEEEEEESS
T ss_pred             EEEEeCC-CC-CCCCEEEEEEeCCccccccccceeeeecCCcc--ccCCCCEEEEEECCCCCCC----ceeEeeeeeecC
Confidence            8889999 54 468999999999972  134468999998642  3457899999999753321    122222333322


Q ss_pred             hhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC
Q psy16044        188 ISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV  250 (436)
Q Consensus       188 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~  250 (436)
                      .          .    ..        ..++|.|||||||+..  +|  .|+||+|||...+..
T Consensus       174 ~----------~----~~--------~~~~~~GdSGGPlv~~--~g--~lvGI~s~g~~~~~i  210 (246)
T 1qtf_A          174 D----------S----QY--------FGYTEVGNSGSGIFNL--KG--ELIGIHSGKGGQHNL  210 (246)
T ss_dssp             S----------S----BE--------ESCCCGGGTTCEEECT--TC--CEEEEEEEEETTTTE
T ss_pred             c----------E----EE--------eCCCCCCCchhheECC--CC--EEEEEEeccccCccc
Confidence            0          0    00        1468999999999952  33  499999999754433


No 167
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.90  E-value=3.6e-24  Score=215.44  Aligned_cols=160  Identities=19%  Similarity=0.307  Sum_probs=121.4

Q ss_pred             CCCccccc---------ccccccceeecccccccCCCCeeeeccCCCCC----CCCCCCCeEEEEecCCCCCCCCcc---
Q psy16044        271 AWPWQNLI---------TSFLSAALLKLSRPTSARDKGVRAVCLTDADK----RPVNPKQQCVATGWGRVKPKGDLV---  334 (436)
Q Consensus       271 ~~p~~~~~---------~~~~diali~l~~~~~~~~~~v~picl~~~~~----~~~~~~~~~~~~Gwg~~~~~~~~~---  334 (436)
                      .||.|+..         +..||||||+|++|+.++.. |+|||||....    .....+..|.+.|||.........   
T Consensus       297 ~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~-v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~  375 (509)
T 2odp_A          297 ISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTH-ARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFV  375 (509)
T ss_dssp             ECTTCCTTTTGGGTCCCCCTTCCEEEEESSCCCCBTT-BCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEE
T ss_pred             ECCCCccccccccccccccCCCeEEEEECCcccCCCC-cccccCCCCcccchhhccCCCCccccccccccccccceeeee
Confidence            49999864         56799999999999999988 99999996532    123568889999999764321111   


Q ss_pred             -ccceEEEEEee---Ccccccccc-------CC----CccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEE
Q psy16044        335 -SKLRQIRVPLH---NISVCRDKY-------GD----SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGI  399 (436)
Q Consensus       335 -~~l~~~~~~~~---~~~~C~~~~-------~~----~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi  399 (436)
                       ...+++.+.++   +.++|+..+       ..    ...++++|||++. .++.+.|+|||||||+|.. +++|+|+||
T Consensus       376 ~l~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~-~~~~~~C~GDSGGPL~~~~-~~~~~l~GI  453 (509)
T 2odp_A          376 ALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGT-QEDESPCKGESGGAVFLER-RFRFFQVGL  453 (509)
T ss_dssp             CTTSCEEEEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECC-TTCCCCCGGGTTCEEEEEE-TTEEEEEEE
T ss_pred             cccCceeeEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCC-CCCCcccCCCccCceEEEE-CCeEEEEEE
Confidence             11245566664   689998752       21    1247899999986 4456899999999999985 689999999


Q ss_pred             EEecC--CCCC---------CCCC------eEEEeCcccHHHHHHHHhhhh
Q psy16044        400 TSFGS--GCAK---------SGYP------DVYTKLSFYLPWIRKQINIAV  433 (436)
Q Consensus       400 ~S~~~--~c~~---------~~~p------~v~t~V~~~~~WI~~~i~~~~  433 (436)
                      +|||.  +|+.         ...|      ++||||++|++||+++|+...
T Consensus       454 vS~G~~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~~~~~~~  504 (509)
T 2odp_A          454 VSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHLGDVL  504 (509)
T ss_dssp             EEEESCCTTC-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHHHHTTTS
T ss_pred             EEEcCCCCCCCcccccccccCcccCCCCCCceeeeHHHHhHHHHHHhCCcc
Confidence            99997  6862         3345      599999999999999997653


No 168
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=99.89  E-value=1.1e-23  Score=161.69  Aligned_cols=94  Identities=31%  Similarity=0.769  Sum_probs=83.6

Q ss_pred             ccccceEEEEEeeCccccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCC
Q psy16044        333 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYP  412 (436)
Q Consensus       333 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p  412 (436)
                      .+..|+++.++++++++|++.+..  .++++|||++.  .+.+.|.|||||||++.. +++|+|+||+|||..|+..+.|
T Consensus         3 ~~~~L~~~~v~i~~~~~C~~~~~~--~i~~~~iCa~~--~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~g~~c~~~~~p   77 (97)
T 1yph_E            3 TPDRLQQASLPLLSNTNCKKYWGT--KIKDAMICAGA--SGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTSTP   77 (97)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHGG--GCCTTEEEEEC--SSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCCTTSE
T ss_pred             cCccceEEEEEECCHHHhhHHhcC--CCCCceEeecC--CCCCCCcCCCCCcEEEEe-CCeEEEEEEEEeCCCCCCCCCC
Confidence            367899999999999999988754  47899999983  346899999999999986 7899999999999998877889


Q ss_pred             eEEEeCcccHHHHHHHHhh
Q psy16044        413 DVYTKLSFYLPWIRKQINI  431 (436)
Q Consensus       413 ~v~t~V~~~~~WI~~~i~~  431 (436)
                      ++||||++|++||+++|+.
T Consensus        78 ~vyt~V~~y~~WI~~~~~~   96 (97)
T 1yph_E           78 GVYARVTALVNWVQQTLAA   96 (97)
T ss_dssp             EEEEEHHHHHHHHHHHHHH
T ss_pred             eEEEEHHHhHHHHHHHHcc
Confidence            9999999999999999875


No 169
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.89  E-value=7.1e-23  Score=181.12  Aligned_cols=165  Identities=14%  Similarity=0.094  Sum_probs=112.4

Q ss_pred             cCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEE
Q psy16044         33 SIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERI  112 (436)
Q Consensus        33 a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i  112 (436)
                      +..++|||+|++.         .++|+|+||+++||||||||+.+..    ....+.|.+|...     ...+.+.+.++
T Consensus         9 ~~~~~~P~~v~~~---------~~~c~G~lI~~~~VLTaaHcv~~~~----~~~~i~v~~~~~~-----~~g~~~~~~~v   70 (210)
T 2as9_A            9 KDTNNFPYNGVVS---------FKDATGFVIGKNTIITNKHVSKDYK----VGDRITAHPNGDK-----GNGGIYKIKSI   70 (210)
T ss_dssp             SCTTSTTGGGEEE---------CSSCEEEEEETTEEEECHHHHHHCC----TTCEEEESCCGGG-----CCSCEEEEEEE
T ss_pred             ecCCcCCeEEEEE---------eeeEEEEEEeCCEEEECHhHCCccC----CCCEEEEEeCccc-----CCCCEEEEEEE
Confidence            5578999999763         3569999999999999999986521    1234566555421     11234556666


Q ss_pred             EeCCCCCCCCCceeEEEeCC--------CCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeee
Q psy16044        113 RVHEEFHNYHHDIALLKLSR--------PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVP  184 (436)
Q Consensus       113 ~~hp~y~~~~~DiAll~L~~--------~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~  184 (436)
                      +.+.    ..+|||||||+.        |+. ++..++|++|+.    ....+..++++||+......   ..+ .....
T Consensus        71 ~~~~----~~~DiAll~l~~~~~~~~~~~~~-~~~~v~~i~l~~----~~~~g~~v~v~G~p~~~~~~---~~l-~~~~g  137 (210)
T 2as9_A           71 SDYP----GDEDISVMNIEEQAVERGPKGFN-FNENVQAFNFAK----DAKVDDKIKVIGYPLPAQNS---FKQ-FESTG  137 (210)
T ss_dssp             EECS----SSSSCEEEEECSEEEEEETTEEE-GGGSCCCCCBCS----CCCTTCEEEEEECSSTTTTT---SCC-EEEEE
T ss_pred             EeCC----CCCcEEEEEecCccccccccccc-cccccceeecCC----CCCCCCEEEEEeCCCCCCCC---cce-EEeee
Confidence            5533    258999999998        566 566789999963    24578999999998643221   122 33444


Q ss_pred             ccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC
Q psy16044        185 LHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG  249 (436)
Q Consensus       185 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~  249 (436)
                      +++..            ...++|+.     ...|.|||||||++.  +|  .|+||+|||...++
T Consensus       138 ~v~~~------------~~~~i~~~-----~~~~~GdSGGPlv~~--~g--~lvGI~s~g~~~~~  181 (210)
T 2as9_A          138 TIKRI------------KDNILNFD-----AYIEPGNSGSPVLNS--NN--EVIGVVYGGIGKIG  181 (210)
T ss_dssp             EEEEE------------ETTEEEEE-----CCCCTTCTTCEEECT--TS--CEEEEECCSCCCTT
T ss_pred             EEccc------------cCCeEEEc-----CccCCCCccCcEECC--CC--eEEEEEecccccCC
Confidence            44332            12578874     578999999999963  34  49999999987554


No 170
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.88  E-value=9.9e-24  Score=221.87  Aligned_cols=161  Identities=24%  Similarity=0.382  Sum_probs=129.2

Q ss_pred             CCCcccccc---------cccccceeecccccccCCCCeeeeccCCCCC----CCCCCCCeEEEEecCCCCCCC------
Q psy16044        271 AWPWQNLIT---------SFLSAALLKLSRPTSARDKGVRAVCLTDADK----RPVNPKQQCVATGWGRVKPKG------  331 (436)
Q Consensus       271 ~~p~~~~~~---------~~~diali~l~~~~~~~~~~v~picl~~~~~----~~~~~~~~~~~~Gwg~~~~~~------  331 (436)
                      .||.|+...         ..||||||+|++|+.++.. |+|||||....    .....+..|.+.|||......      
T Consensus       530 ~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv~~s~~-v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~  608 (741)
T 3hrz_D          530 FHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQT-IRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFV  608 (741)
T ss_dssp             ECTTCCTTTTGGGTCSCCCTTCCEEEEESSCCCCCSS-CCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEE
T ss_pred             ECCCCCcccccccccCCccCCcEEEEEECCcCcCCCC-ccccccCCcccccchhccCCCCccccccccccccccccceec
Confidence            489998654         6899999999999999988 99999996432    235678899999999765432      


Q ss_pred             -CccccceEEEEEeeC---ccccccccC------C----CccCCCCceecccCCC--CCCCccCCCCceeeeEecCCcEE
Q psy16044        332 -DLVSKLRQIRVPLHN---ISVCRDKYG------D----SVELHGGHLCGGQLDG--FSGACIGDSGGPLQCSLKDGRWY  395 (436)
Q Consensus       332 -~~~~~l~~~~~~~~~---~~~C~~~~~------~----~~~~~~~~~C~~~~~~--~~~~c~gdsGgpl~~~~~~~~~~  395 (436)
                       .....|+.+.+.+++   .+.|+..+.      .    ...++++|||++...+  ..+.|+|||||||++.. +++|+
T Consensus       609 ~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~-~~~~~  687 (741)
T 3hrz_D          609 SEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHK-RSRFI  687 (741)
T ss_dssp             EESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEE-TTEEE
T ss_pred             cccccccccceeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEee-CCeEE
Confidence             125578999999998   788987421      1    1247899999987652  46899999999999986 78999


Q ss_pred             EEEEEEecC--CCCC---CCCC-----eEEEeCcccHHHHHHHHhhhh
Q psy16044        396 LAGITSFGS--GCAK---SGYP-----DVYTKLSFYLPWIRKQINIAV  433 (436)
Q Consensus       396 l~Gi~S~~~--~c~~---~~~p-----~v~t~V~~~~~WI~~~i~~~~  433 (436)
                      |+||+|||.  +|+.   .+.|     ++||+|+.|++||+++|+.+.
T Consensus       688 lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~~~  735 (741)
T 3hrz_D          688 QVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDED  735 (741)
T ss_dssp             EEEEEEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTTTSS
T ss_pred             EEEEEeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhcCCC
Confidence            999999997  8987   5778     999999999999999998753


No 171
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=99.86  E-value=1.6e-21  Score=144.24  Aligned_cols=79  Identities=33%  Similarity=0.611  Sum_probs=67.7

Q ss_pred             EeCCcccCCCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEE
Q psy16044         27 LINGKESIRGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVR  106 (436)
Q Consensus        27 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~  106 (436)
                      |+||.++..++|||+|+|+...      .++|+||||+++||||||||+..         .+.|++|..++.......+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~------~~~CgGslIs~~~VLTAAHC~~~---------~~~v~~G~~~~~~~~~~~~~   65 (80)
T 2pka_A            1 IIGGRECEKNSHPWQVAIYHYS------SFQCGGVLVNPKWVLTAAHCKND---------NYEVWLGRHNLFENENTAQF   65 (80)
T ss_dssp             CBSCEECCTTSCTTEEEEEETT------EEEEEEEEEETTEEEECGGGCCS---------CCEEEESCSBTTSCCTTCEE
T ss_pred             CCCCEECCCCCCCcEEEEEECC------ceEEEEEEEcCCEEEECHHHCCC---------CcEEEEeeeEcCCCCCCcEE
Confidence            6899999999999999998542      68999999999999999999854         24699999887765555688


Q ss_pred             EeeeEEEeCCCCCC
Q psy16044        107 IPVERIRVHEEFHN  120 (436)
Q Consensus       107 ~~v~~i~~hp~y~~  120 (436)
                      +.|+++++||+|+.
T Consensus        66 ~~v~~i~~Hp~y~~   79 (80)
T 2pka_A           66 FGVTADFPHPGFNL   79 (80)
T ss_dssp             EEEEEEEECTTTTT
T ss_pred             EEEEEEEECcCCCC
Confidence            89999999999963


No 172
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.85  E-value=6.9e-23  Score=182.19  Aligned_cols=131  Identities=10%  Similarity=-0.040  Sum_probs=107.8

Q ss_pred             CCCCccc-ccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcc
Q psy16044        270 GAWPWQN-LITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  348 (436)
Q Consensus       270 ~~~p~~~-~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~  348 (436)
                      ..||.|+ .....+|||||+|++|  ++.. ++|||||....   ..++.|+++|||.+.. ...+..|+++.+.+++.+
T Consensus        83 ~~hp~y~~~~~~~~DiAll~L~~~--~~~~-v~pi~l~~~~~---~~g~~~~~~Gwg~~~~-~~~~~~l~~~~~~~~~~~  155 (215)
T 1p3c_A           83 YVPSGYINTGASQYDFAVIKTDTN--IGNT-VGYRSIRQVTN---LTGTTIKISGYPGDKM-RSTGKVSQWEMSGSVTRE  155 (215)
T ss_dssp             ECCHHHHHHCCGGGCCEEEEESSC--HHHH-HCCCCBCCCSC---CTTCEEEEEECCHHHH-HHHSSCCCEEEEEECCEE
T ss_pred             EeCCccccCCCcccCEEEEEECCC--Cccc-ceeeecCCCcc---cCCCeEEEecCCCCCc-ccccceechhccCccCcc
Confidence            3589994 5677899999999997  4444 99999997653   6789999999996543 223567999999999999


Q ss_pred             ccccccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHH
Q psy16044        349 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       349 ~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      .|...+.                 ..+.|.|||||||++.  ++  +|+||+|||..|+  ..|.+||+|++|++||+++
T Consensus       156 ~c~~~~~-----------------~~~~C~GDSGgPl~~~--~g--~lvGi~S~g~~c~--~~p~v~t~v~~~~~WI~~~  212 (215)
T 1p3c_A          156 DTNLAYY-----------------TIDTFSGNSGSAMLDQ--NQ--QIVGVHNAGYSNG--TINGGPKATAAFVEFINYA  212 (215)
T ss_dssp             CSSEEEE-----------------CCCCCTTCTTCEEECT--TS--CEEEECCEEEGGG--TEEEEEBCCHHHHHHHHHH
T ss_pred             cchheee-----------------ccccCCCCCCCeeEcc--CC--eEEEEEecccCCC--ccCceeEechHHHHHHHHH
Confidence            9987641                 2478999999999984  33  6999999998887  5699999999999999998


Q ss_pred             Hh
Q psy16044        429 IN  430 (436)
Q Consensus       429 i~  430 (436)
                      ++
T Consensus       213 ~~  214 (215)
T 1p3c_A          213 KA  214 (215)
T ss_dssp             HT
T ss_pred             hc
Confidence            75


No 173
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.82  E-value=1.3e-21  Score=169.56  Aligned_cols=166  Identities=19%  Similarity=0.253  Sum_probs=109.7

Q ss_pred             CeeeE-EEEec---CCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEe
Q psy16044         55 PHWCG-AVLIH---PSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKL  130 (436)
Q Consensus        55 ~~~C~-GtLIs---~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L  130 (436)
                      ...|+ |.++.   ++||||||||+...       ..+.+..+  ..       +...  . ..+..|  ..+|||||||
T Consensus        11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~~-------~~~~v~~~--~~-------~~~g--~-~~~~~~--~~~DiAll~l   69 (185)
T 2qa9_E           11 TGRCSLGFNVRSGSTYYFLTAGHCTDGA-------TTWWANSA--RT-------TVLG--T-TSGSSF--PNNDYGIVRY   69 (185)
T ss_dssp             SCEEECCEEEEETTEEEEEECHHHHTTC-------SEEESSTT--SC-------SEEE--E-EEEEEC--SBSCEEEEEE
T ss_pred             CCcEeccEEEEECCceEEEECcccCCCC-------CcEEecCC--Cc-------eEeE--E-Eecccc--CCCCEEEEEe
Confidence            35799 99987   47999999998653       22222111  00       0000  0 011111  3489999999


Q ss_pred             CC-CCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEec
Q psy16044        131 SR-PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGG  209 (436)
Q Consensus       131 ~~-~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~  209 (436)
                      ++ ++. ++..++|++|+..  .....+..+.++||+..    .....|+...+++ ....|. .+.   .....++|+ 
T Consensus        70 ~~~~~~-~~~~v~~~~l~~~--~~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v-~~~~~~-~~~---~~~~~~~ca-  136 (185)
T 2qa9_E           70 TNTTIP-KDGTVGGQDITSA--ANATVGMAVTRRGSTTG----THSGSVTALNATV-NYGGGD-VVY---GMIRTNVCA-  136 (185)
T ss_dssp             CCSSSC-CCCEETTEECCEE--CCCCTTCEEEEEETTTE----EEEEEEEEEEEEE-ECSTTC-EEE---EEEEESCCC-
T ss_pred             cCCCcc-ccCccceeeeCCc--ccCCCCCEEEEecCCCc----eeEeEEEEEEEEE-EcCCCC-EEe---ceEEecccC-
Confidence            99 887 6778899998753  23457899999999642    2234577766664 333332 111   112356665 


Q ss_pred             cCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCcccccccceecCCccc
Q psy16044        210 QLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGIRYSHRQPRLINGKES  267 (436)
Q Consensus       210 ~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~~y~~v~~~~~~~~~~  267 (436)
                              |+|||||||++.   +  .|+||+|||.++|.  .+.+|++|..+..||...
T Consensus       137 --------c~GDSGGPlv~~---~--~~vGI~s~g~~~~~~~~p~vyt~v~~~~~wI~~~  183 (185)
T 2qa9_E          137 --------EPGDSGGPLYSG---T--RAIGLTSGGSGNCSSGGTTFFQPVTEALSAYGVS  183 (185)
T ss_dssp             --------CTTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHTCE
T ss_pred             --------CCCCccceEEEC---C--EEEEEEEecCCCCCCCCcEEEEEHHHHHHhhCcE
Confidence                    999999999974   2  69999999988785  457899999999998654


No 174
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=99.74  E-value=1.1e-18  Score=133.67  Aligned_cols=90  Identities=30%  Similarity=0.659  Sum_probs=76.8

Q ss_pred             ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CC
Q psy16044        174 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VG  251 (436)
Q Consensus       174 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~  251 (436)
                      .+..|+++.+++++.++|+..+..  ...+.||||+.  ...++|.|||||||++.. +++|+|+||+|||.+||.  .+
T Consensus         3 ~~~~L~~~~v~i~~~~~C~~~~~~--~i~~~~iCa~~--~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~g~~c~~~~~p   77 (97)
T 1yph_E            3 TPDRLQQASLPLLSNTNCKKYWGT--KIKDAMICAGA--SGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTSTP   77 (97)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHGG--GCCTTEEEEEC--SSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCCTTSE
T ss_pred             cCccceEEEEEECCHHHhhHHhcC--CCCCceEeecC--CCCCCCcCCCCCcEEEEe-CCeEEEEEEEEeCCCCCCCCCC
Confidence            356799999999999999988753  35679999983  346899999999999985 789999999999998775  36


Q ss_pred             cccccccceecCCcccc
Q psy16044        252 IRYSHRQPRLINGKESI  268 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~  268 (436)
                      .+|++|.+|..||.+.+
T Consensus        78 ~vyt~V~~y~~WI~~~~   94 (97)
T 1yph_E           78 GVYARVTALVNWVQQTL   94 (97)
T ss_dssp             EEEEEHHHHHHHHHHHH
T ss_pred             eEEEEHHHhHHHHHHHH
Confidence            79999999999998654


No 175
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.72  E-value=8.3e-18  Score=151.97  Aligned_cols=93  Identities=28%  Similarity=0.501  Sum_probs=76.6

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC-CCC---C
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-YCG---V  250 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~-~C~---~  250 (436)
                      +..|++..+++++.+.|+..+.......+.||||+. .+..++|.|||||||++...+++|+|+||+|||.. .|+   .
T Consensus       142 ~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~  220 (241)
T 1bru_P          142 PDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHK  220 (241)
T ss_dssp             CSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECC-SSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTC
T ss_pred             CccceeCEEEEecHHHhCcccccCCcCCCceEeecC-CCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCC
Confidence            467999999999999998864322345679999984 44578999999999999866889999999999973 365   4


Q ss_pred             CcccccccceecCCcccc
Q psy16044        251 GIRYSHRQPRLINGKESI  268 (436)
Q Consensus       251 ~~~y~~v~~~~~~~~~~~  268 (436)
                      +.+|++|.+|..||.+.+
T Consensus       221 p~vyt~V~~~~~WI~~~i  238 (241)
T 1bru_P          221 PSVFTRVSNYIDWINSVI  238 (241)
T ss_dssp             CEEEEEGGGSHHHHHHHH
T ss_pred             CcEEEEHHHhHHHHHHHH
Confidence            689999999999998764


No 176
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.72  E-value=8.4e-19  Score=151.72  Aligned_cols=124  Identities=18%  Similarity=0.180  Sum_probs=93.6

Q ss_pred             cccccceeeccc-ccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCc
Q psy16044        280 SFLSAALLKLSR-PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSV  358 (436)
Q Consensus       280 ~~~diali~l~~-~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~  358 (436)
                      ..+|||||||+. ++.++.. ++|++|+...  .+..++.+.++||+..    .....|+.+.+++ +...|. .+.   
T Consensus        60 ~~~DiAll~l~~~~~~~~~~-v~~~~l~~~~--~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v-~~~~~~-~~~---  127 (185)
T 2qa9_E           60 PNNDYGIVRYTNTTIPKDGT-VGGQDITSAA--NATVGMAVTRRGSTTG----THSGSVTALNATV-NYGGGD-VVY---  127 (185)
T ss_dssp             SBSCEEEEEECCSSSCCCCE-ETTEECCEEC--CCCTTCEEEEEETTTE----EEEEEEEEEEEEE-ECSTTC-EEE---
T ss_pred             CCCCEEEEEecCCCccccCc-cceeeeCCcc--cCCCCCEEEEecCCCc----eeEeEEEEEEEEE-EcCCCC-EEe---
Confidence            358999999999 8888877 8999997532  3467899999999641    2345677777775 333442 121   


Q ss_pred             cCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        359 ELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       359 ~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      .+...|+|+         |+|||||||++.   +  .|+||+||+.+|+..+.|++|++|+.|++||+..+
T Consensus       128 ~~~~~~~ca---------c~GDSGGPlv~~---~--~~vGI~s~g~~~~~~~~p~vyt~v~~~~~wI~~~l  184 (185)
T 2qa9_E          128 GMIRTNVCA---------EPGDSGGPLYSG---T--RAIGLTSGGSGNCSSGGTTFFQPVTEALSAYGVSV  184 (185)
T ss_dssp             EEEEESCCC---------CTTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHTCEE
T ss_pred             ceEEecccC---------CCCCccceEEEC---C--EEEEEEEecCCCCCCCCcEEEEEHHHHHHhhCcEE
Confidence            123467886         999999999974   2  69999999988776677999999999999997543


No 177
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.71  E-value=1e-16  Score=144.25  Aligned_cols=166  Identities=20%  Similarity=0.213  Sum_probs=105.2

Q ss_pred             CCCCcceEEEeeeccCCCCCCeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEe
Q psy16044         35 RGAWPWQVSLQVLHPRLGLMPHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRV  114 (436)
Q Consensus        35 ~~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~  114 (436)
                      ..-.|.+|.|.......+ ....|+|+||+++||||||||+.+       ...+.|.++.          ..+..+.+..
T Consensus        38 ~~~~~svV~I~~~~~~~~-~~~~GsG~iI~~~~VlTaaH~v~~-------~~~~~V~~~~----------~~~~~~~v~~   99 (237)
T 3k6y_A           38 AATEPSVVKIRSLAPRCQ-KVLEGTGFVISPDRVMTNAHVVAG-------SNNVTVYAGD----------KPFEATVVSY   99 (237)
T ss_dssp             HHHGGGEEEEEEEEGGGT-EEEEEEEEEEETTEEEECGGGTTT-------CSEEEEEETT----------EEEECEEEEE
T ss_pred             HHhcCCEEEEEEEecCCC-cceeEEEEEEECCEEEECHHHcCC-------CceEEEEECC----------cEEEEEEEEE
Confidence            345789999987542222 146799999999999999999865       2456777764          1334455566


Q ss_pred             CCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhh
Q psy16044        115 HEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDK  194 (436)
Q Consensus       115 hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~  194 (436)
                      |+.     +|||||||+.      ..++|++|+.   .....+..++++||+.....     .+....+.......|...
T Consensus       100 ~~~-----~DiAll~l~~------~~~~~~~l~~---~~~~~G~~v~v~G~p~g~~~-----~~~~g~v~~~~~~~~~~~  160 (237)
T 3k6y_A          100 DPS-----VDVAILAVPH------LPPPPLVFAA---EPAKTGADVVVLGYPGGGNF-----TATPARIREAIRLSGPDI  160 (237)
T ss_dssp             ETT-----TTEEEEECTT------CCSCCCCBCS---SCCCTTCEEEEEECGGGCSC-----EEEEEEEEEEEEEEECCT
T ss_pred             cCC-----CCEEEEEeCC------CCCCceecCC---CCCCCCCEEEEEECCCCCCC-----ccceeEEEeeEeeccccc
Confidence            665     7999999982      2478889973   33557899999999864321     122222222222233332


Q ss_pred             cCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        195 YGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       195 ~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      +.........+++.     ....|.|||||||++.  +|+  |+||+|++..
T Consensus       161 ~~~~~~~~~~~~~~-----~~~~~~GdSGGPLv~~--~G~--vvGI~s~~~~  203 (237)
T 3k6y_A          161 YGDPEPVTRDVYTI-----RADVEQGDSGGPLIDL--NGQ--VLGVVFGAAI  203 (237)
T ss_dssp             TCCSSCEEEEEEEE-----ESCCCTTCTTCEEECT--TSC--EEEEEEEECS
T ss_pred             ccCCCcccccEEEe-----cCccCCCccHHHEECC--CCE--EEEEEEeecc
Confidence            22110000123333     2578999999999963  343  9999999865


No 178
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.71  E-value=1.9e-17  Score=153.80  Aligned_cols=93  Identities=29%  Similarity=0.457  Sum_probs=77.0

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCC---CCCCCccCCCCCeeeeEec-CCcEEEEEEEeEcCCCCC-
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD---GFSGACIGDSGGPLQCSLK-DGRWYLAGITSFGSGYCG-  249 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~---~~~~~C~gDsGgPl~~~~~-~~~~~l~GI~S~g~~~C~-  249 (436)
                      +..|+++.+++++.+.|+..+..  ..++.||||+...   ...++|.|||||||++... +++|+|+||+|||.+|+. 
T Consensus       187 ~~~L~~~~v~i~~~~~C~~~~~~--~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~  264 (289)
T 2bdy_A          187 PSVLQVVNLPIVERPVCKDSTRI--RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  264 (289)
T ss_dssp             CSBCEEEEEEBCCHHHHHHTCSS--CCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCT
T ss_pred             cccceEEEEEEECHHHhhccccC--cCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCC
Confidence            46799999999999999988753  3567999998643   2578999999999999752 789999999999987432 


Q ss_pred             -CCcccccccceecCCccccC
Q psy16044        250 -VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       250 -~~~~y~~v~~~~~~~~~~~~  269 (436)
                       .+.+|++|..|..||.+.+.
T Consensus       265 ~~p~vyt~V~~y~~WI~~~i~  285 (289)
T 2bdy_A          265 GKYGFYTHVFRLKKWIQKVID  285 (289)
T ss_dssp             TCCEEEEETGGGHHHHHHHHH
T ss_pred             CCCEEEEEHHHHHHHHHHHHH
Confidence             46799999999999987653


No 179
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.70  E-value=1.7e-17  Score=150.31  Aligned_cols=89  Identities=30%  Similarity=0.671  Sum_probs=76.0

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCc
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGI  252 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~  252 (436)
                      +..|+++.+++++.+.|+..+..  ...+.|||++  ....+.|.|||||||++.. +++|+|+||+|||.+||.  .+.
T Consensus       152 ~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~--~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~c~~~~~p~  226 (245)
T 1t8o_A          152 PDRLQQASLPLLSNTNCKKYWGT--KIKDAMICAG--ASGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTSTPG  226 (245)
T ss_dssp             CSBCEEEEEEEECHHHHHHHHGG--GCCTTEEEEE--CSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCCTTSEE
T ss_pred             cchheEEEEeeEcchhhhHhhcC--cCCCceEEcc--CCCCccCcccCcCCEEEEE-CCEEEEEEEEEeCCCCCCCCCCE
Confidence            45799999999999999988753  3467999998  3447899999999999985 789999999999998764  357


Q ss_pred             ccccccceecCCcccc
Q psy16044        253 RYSHRQPRLINGKESI  268 (436)
Q Consensus       253 ~y~~v~~~~~~~~~~~  268 (436)
                      +|++|..|..||.+.+
T Consensus       227 vyt~V~~~~~WI~~~~  242 (245)
T 1t8o_A          227 VYARVTALVNWVQQTL  242 (245)
T ss_dssp             EEEEGGGTHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHH
Confidence            9999999999998765


No 180
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.67  E-value=2.6e-17  Score=141.69  Aligned_cols=156  Identities=20%  Similarity=0.185  Sum_probs=100.0

Q ss_pred             CeeeE-EEEec---CCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEe
Q psy16044         55 PHWCG-AVLIH---PSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKL  130 (436)
Q Consensus        55 ~~~C~-GtLIs---~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L  130 (436)
                      ...|+ |.||+   ++||||||||+...         ..+.+|...               -..+     ..+|||||||
T Consensus        11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~~---------~~~~~G~~~---------------~~~~-----~~~DiAlikl   61 (181)
T 2sga_A           11 GSRCSLGFNVSVNGVAHALTAGHCTNIS---------ASWSIGTRT---------------GTSF-----PNNDYGIIRH   61 (181)
T ss_dssp             TEEEECCEEEEETTEEEEEECHHHHTTC---------SEETTEEEE---------------EEEC-----SBSCEEEEEE
T ss_pred             CCcEeccEEEEECCceEEEECcccCCCC---------Cceeeccee---------------CCcC-----CCCCEEEEEc
Confidence            35799 99998   78999999998542         123333321               0111     2479999999


Q ss_pred             CCCCCCCCCceeee----eecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeE
Q psy16044        131 SRPTSARDKGVRAV----CLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHL  206 (436)
Q Consensus       131 ~~~~~~~~~~v~pi----~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~  206 (436)
                      ++++. ++..++++    +++.. ...+..+..+.+.||....    ....++...+.+ +...+. .+       ..++
T Consensus        62 ~~~~~-~~~~v~~i~~~~~~~~~-~~~~~~G~~v~~~G~~~~~----t~G~v~~~~~~v-~~~~~~-~~-------~~~i  126 (181)
T 2sga_A           62 SNPAA-ADGRVYLYNGSYQDITT-AGNAFVGQAVQRSGSTTGL----RSGSVTGLNATV-NYGSSG-IV-------YGMI  126 (181)
T ss_dssp             SCGGG-CCCEEECSSSCEEECCE-ECCCCTTCEEEEEETTTEE----EEEEEEEEEEEE-ECGGGC-EE-------EEEE
T ss_pred             cCCCc-ccceEEecCCcceeecc-cccCCCCCEEEEeecCCCc----cEEEEEEeEEEE-ECCCCC-EE-------eeeE
Confidence            99887 56678887    66642 2335678899999987431    122355555553 322221 01       1233


Q ss_pred             EeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC--CcccccccceecCC
Q psy16044        207 CGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV--GIRYSHRQPRLING  264 (436)
Q Consensus       207 Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~--~~~y~~v~~~~~~~  264 (436)
                      +..     .-.|+|||||||++.   +  .++||+|||.++|+.  +..|+++..+..|.
T Consensus       127 ~~~-----~c~~~GDSGGPlv~~---~--~~vGI~s~g~~~~~~~~~~v~~~v~~~~~~l  176 (181)
T 2sga_A          127 QTN-----VCAQPGDSGGSLFAG---S--TALGLTSGGSGNCRTGGTTFYQPVTEALSAY  176 (181)
T ss_dssp             EES-----CCCCTTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHHHHHHH
T ss_pred             ecc-----cccCCCCCCCEEEEC---C--EEEEEEEeeCCCCcCCCceEEEEHHHHHHhc
Confidence            321     234689999999964   2  699999999887863  46788887766553


No 181
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.67  E-value=7.8e-17  Score=143.64  Aligned_cols=88  Identities=30%  Similarity=0.549  Sum_probs=73.5

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCc
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGI  252 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~  252 (436)
                      +..|++..+++++.++|+..+..  ...+.|||++...+..+.|.|||||||+++   +  +|+||+|||.+|+  +.+.
T Consensus       131 ~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~C~~~~~p~  203 (222)
T 1hj8_A          131 SNKLQCLNIPILSYSDCNNSYPG--MITNAMFCAGYLEGGKDSCQGDSGGPVVCN---G--ELQGVVSWGYGCAEPGNPG  203 (222)
T ss_dssp             TTBCEEEEEEBCCHHHHHHHSTT--CCCTTEEEESCTTSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSSCTTCCE
T ss_pred             CceeEEEEEEEcCHHHhhhhccC--CCCCCeEEeccCCCCCccCCCCcccceEEC---C--EEEEEEeecCCCCCCCcCc
Confidence            45799999999999999998754  345799999876666899999999999984   2  5999999998743  2468


Q ss_pred             ccccccceecCCccccC
Q psy16044        253 RYSHRQPRLINGKESIR  269 (436)
Q Consensus       253 ~y~~v~~~~~~~~~~~~  269 (436)
                      +|++|.+|..||.+.+.
T Consensus       204 vyt~v~~~~~WI~~~~~  220 (222)
T 1hj8_A          204 VYAKVCIFNDWLTSTMA  220 (222)
T ss_dssp             EEEEGGGGHHHHHHHHH
T ss_pred             EEEEhHHhHHHHHHHhh
Confidence            99999999999987653


No 182
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.66  E-value=1.4e-16  Score=142.15  Aligned_cols=88  Identities=26%  Similarity=0.427  Sum_probs=74.0

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC---CC
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG---VG  251 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~---~~  251 (436)
                      +..|++..+++++.++|+..+..  ...+.|||++...+..+.|.|||||||++++     +|+||+|||...|+   .+
T Consensus       131 ~~~l~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p  203 (223)
T 1lo6_A          131 PDTIQCAYIHLVSREECEHAYPG--QITQNMLCAGDEKYGKDSCQGDSGGPLVCGD-----HLRGLVSWGNIPCGSKEKP  203 (223)
T ss_dssp             CSBCEEEEEEEECHHHHHHHSTT--TCCTTEEEEECTTTCCBCCTTTTTCEEEETT-----EEEEEEEECCSSCCCSSSC
T ss_pred             CceeeEEEEEEeCHHHhhhhhCC--CCCCCeEEeecCCCCCeeccccCCCcEEeCC-----EEEEEEeeCCCCCCCCCCC
Confidence            46799999999999999998754  3457999999876668999999999999842     59999999954575   36


Q ss_pred             cccccccceecCCccccC
Q psy16044        252 IRYSHRQPRLINGKESIR  269 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~~  269 (436)
                      .+|++|.+|..||.+.+.
T Consensus       204 ~vyt~V~~~~~WI~~~i~  221 (223)
T 1lo6_A          204 GVYTNVCRYTNWIQKTIQ  221 (223)
T ss_dssp             EEEEEGGGGHHHHHHHHC
T ss_pred             cEEEEHHHHHHHHHHHhc
Confidence            799999999999987654


No 183
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.65  E-value=1.6e-16  Score=142.21  Aligned_cols=87  Identities=28%  Similarity=0.518  Sum_probs=73.2

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCc
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGI  252 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~  252 (436)
                      +..|++..+++++.+.|+..+..  ...+.|||++...+..+.|.|||||||+++.     +|+||+|||.+|+  +.+.
T Consensus       136 ~~~l~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~C~~~~~p~  208 (228)
T 1fxy_A          136 PDELQCLDAPVLSQAKCEASYPG--KITSNMFCVGFLEGGKDSCQGDSGGPVVCNG-----QLQGVVSWGDGCAQKNKPG  208 (228)
T ss_dssp             CSSCEEEEEEBCCHHHHHHHSTT--TCCTTEEEESCTTCSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSBTTBCE
T ss_pred             CccceEEEEEEeCHHHhHhhcCC--CCCCCEEEeccCCCCCccccCccccceEECC-----EEEEEEEECCCCCCCCCCE
Confidence            45799999999999999998754  3456899998766668999999999999852     6999999998743  2468


Q ss_pred             ccccccceecCCcccc
Q psy16044        253 RYSHRQPRLINGKESI  268 (436)
Q Consensus       253 ~y~~v~~~~~~~~~~~  268 (436)
                      +|++|.+|..||.+.+
T Consensus       209 vyt~V~~y~~WI~~~~  224 (228)
T 1fxy_A          209 VYTKVYNYVKWIKNTI  224 (228)
T ss_dssp             EEEEGGGGHHHHHHHH
T ss_pred             EEEEhHHHHHHHHHHH
Confidence            9999999999998765


No 184
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.65  E-value=1.8e-16  Score=142.85  Aligned_cols=106  Identities=28%  Similarity=0.559  Sum_probs=88.2

Q ss_pred             CCcEEEEecCccCCCC-CccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcE
Q psy16044        157 KQQCVATGWGRVKPKG-DLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRW  235 (436)
Q Consensus       157 ~~~~~~~GwG~~~~~~-~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~  235 (436)
                      +..++++|||.+...+ ..+..|+++.+++++.++|+..+...  ..+.|||++...+..++|.|||||||+++.     
T Consensus       126 ~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~--~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----  198 (238)
T 1spj_A          126 GSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQK--VTDFMLCVGHLEGGKDTCVGDSGGPLMCDG-----  198 (238)
T ss_dssp             TCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSC--CCTTEEEEECTTCSSBCCTTCTTCEEEETT-----
T ss_pred             CCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCC--CCCCeEEeeCCCCCCCCCCCCCCCcEEEcC-----
Confidence            5679999999887554 45678999999999999999887543  467999999866668999999999999842     


Q ss_pred             EEEEEEeEcCCCCC---CCcccccccceecCCccccC
Q psy16044        236 YLAGITSFGSGYCG---VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       236 ~l~GI~S~g~~~C~---~~~~y~~v~~~~~~~~~~~~  269 (436)
                      +|+||+|||...|+   .+.+|++|.+|..||.+.+.
T Consensus       199 ~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~  235 (238)
T 1spj_A          199 VLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIA  235 (238)
T ss_dssp             EEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             EEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence            79999999954465   46799999999999987653


No 185
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.64  E-value=1.9e-16  Score=142.77  Aligned_cols=92  Identities=29%  Similarity=0.516  Sum_probs=77.1

Q ss_pred             cccceeeeeeccchhhhhhhcCCC-cCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDS-VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---  250 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~-~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---  250 (436)
                      +..|+...+.+++.+.|+..+... ....+.|||++...+..++|.|||||||+++.     .|+||+|||.+.|+.   
T Consensus       136 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~  210 (238)
T 4e7n_A          136 PDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLICNG-----QFQGIASWGDDPCAQPHK  210 (238)
T ss_dssp             CSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTC
T ss_pred             CccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCCCCCcceEECC-----EEEEEEEEeCCCCCCCCC
Confidence            457899999999999999887531 34567999999877778999999999999853     399999999886754   


Q ss_pred             CcccccccceecCCccccCCC
Q psy16044        251 GIRYSHRQPRLINGKESIRGA  271 (436)
Q Consensus       251 ~~~y~~v~~~~~~~~~~~~~~  271 (436)
                      +.+|++|.+|..||.+.+...
T Consensus       211 p~vyt~V~~~~~WI~~~i~~~  231 (238)
T 4e7n_A          211 PAAYTKVFDHLDWIENIIAGN  231 (238)
T ss_dssp             CEEEEESGGGHHHHHHHHTTC
T ss_pred             CeEEEEhHHHHHHHHHHHhcC
Confidence            679999999999999877643


No 186
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.64  E-value=2.2e-16  Score=142.23  Aligned_cols=104  Identities=34%  Similarity=0.568  Sum_probs=86.8

Q ss_pred             cEEEEecCccCCCCCc-cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEE
Q psy16044        159 QCVATGWGRVKPKGDL-VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYL  237 (436)
Q Consensus       159 ~~~~~GwG~~~~~~~~-~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l  237 (436)
                      .++++|||.+...+.. +..|+++.+++++.+.|...+..  ...+.||||+...+..++|.|||||||+++.     +|
T Consensus       127 ~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l  199 (237)
T 2zch_P          127 TCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQ--KVTKFMLCAGRWTGGKSTCSGDSGGPLVCNG-----VL  199 (237)
T ss_dssp             EEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSS--BCCTTEEEEECTTCSCBCCTTCTTCEEESSS-----SE
T ss_pred             EEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccC--CCCceEEeecCCCCCCcccCCCccCeEEECC-----EE
Confidence            5789999998755443 67899999999999999988754  3456999999876678999999999999853     69


Q ss_pred             EEEEeEcCCCCC---CCcccccccceecCCccccC
Q psy16044        238 AGITSFGSGYCG---VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       238 ~GI~S~g~~~C~---~~~~y~~v~~~~~~~~~~~~  269 (436)
                      +||+|||...|+   .+.+|++|.+|..||.+.+.
T Consensus       200 ~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~  234 (237)
T 2zch_P          200 QGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIV  234 (237)
T ss_dssp             EEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             EEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence            999999985564   46899999999999987654


No 187
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.64  E-value=2.8e-16  Score=140.10  Aligned_cols=87  Identities=32%  Similarity=0.571  Sum_probs=72.5

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCc
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGI  252 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~  252 (436)
                      +..|+++.+++++.+.|+..+..  ...+.|||++...+..++|.|||||||+++.     +|+||+|||.+|+  +.+.
T Consensus       132 ~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~C~~~~~p~  204 (223)
T 3mfj_A          132 PDVLKCLKAPILSDSSCKSAYPG--QITSNMFCAGYLEGGKDSCQGDSGGPVVCSG-----KLQGIVSWGSGCAQKNKPG  204 (223)
T ss_dssp             CSSCEEEEEEBCCHHHHHHHSTT--TCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSBTTBCE
T ss_pred             cchheEEEEEEeCHHHhhhhhcC--cCCCCEEEccCCCCCCCcCCCCcccceEECC-----EEEEEEEECCCCCCCCCCe
Confidence            35699999999999999988754  3456999998766668999999999999842     5999999998743  2468


Q ss_pred             ccccccceecCCcccc
Q psy16044        253 RYSHRQPRLINGKESI  268 (436)
Q Consensus       253 ~y~~v~~~~~~~~~~~  268 (436)
                      +|++|.+|..||.+.+
T Consensus       205 vyt~V~~~~~WI~~~i  220 (223)
T 3mfj_A          205 VYTKVCNYVSWIKQTI  220 (223)
T ss_dssp             EEEEGGGGHHHHHHHH
T ss_pred             EEEEHHHhHHHHHHHH
Confidence            9999999999998754


No 188
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.64  E-value=3.4e-16  Score=141.03  Aligned_cols=106  Identities=30%  Similarity=0.569  Sum_probs=87.2

Q ss_pred             CCcEEEEecCccCCC-CCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcE
Q psy16044        157 KQQCVATGWGRVKPK-GDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRW  235 (436)
Q Consensus       157 ~~~~~~~GwG~~~~~-~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~  235 (436)
                      +..++++|||.+... ...+..|+++.+++++.+.|...+..  ...+.||||+...+..++|.|||||||+++   +  
T Consensus       125 ~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--  197 (237)
T 1ao5_A          125 GSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQ--KVTDVMLCAGEMGGGKDTCRDDSGGPLICD---G--  197 (237)
T ss_dssp             TCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSS--CCCTTEEEEECTTCSCBCCTTCTTCEEEET---T--
T ss_pred             CCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcc--cCCCCEEEEccCCCCCCCCCCCCcceEEEC---C--
Confidence            467899999988765 45677899999999999999998754  346799999854555899999999999984   2  


Q ss_pred             EEEEEEeEcCCCCCC---CcccccccceecCCccccC
Q psy16044        236 YLAGITSFGSGYCGV---GIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       236 ~l~GI~S~g~~~C~~---~~~y~~v~~~~~~~~~~~~  269 (436)
                      +|+||+|||...|+.   +.+|++|..|..||.+.+.
T Consensus       198 ~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~  234 (237)
T 1ao5_A          198 ILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMM  234 (237)
T ss_dssp             EEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHH
T ss_pred             EEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence            699999999544653   6799999999999987653


No 189
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.63  E-value=3.3e-16  Score=140.04  Aligned_cols=87  Identities=25%  Similarity=0.452  Sum_probs=71.6

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC---CC
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG---VG  251 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~---~~  251 (436)
                      +..|++..+++++.+.|+..+..  ...+.|||++.. ...+.|.|||||||++..     +|+||+|||...|+   .+
T Consensus       135 ~~~L~~~~~~i~~~~~C~~~~~~--~~~~~~~Ca~~~-~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p  206 (227)
T 2psx_A          135 PKVLQCLNISVLSQKRCEDAYPR--QIDDTMFCAGDK-AGRDSCQGDSGGPVVCNG-----SLQGLVSWGDYPCARPNRP  206 (227)
T ss_dssp             CSBCEEEEEEBCCHHHHHHHSTT--TCCTTEEEECCS-TTCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCC
T ss_pred             CchheEEEEEecCHhHhhhhcCC--CCCCCEEcccCC-CCCccCCCCCCcceeeCC-----EEEEEEeecCCCCCCCCCC
Confidence            45799999999999999988764  346799999863 347899999999999853     69999999954454   46


Q ss_pred             cccccccceecCCccccC
Q psy16044        252 IRYSHRQPRLINGKESIR  269 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~~  269 (436)
                      .+|++|..|..||.+.+.
T Consensus       207 ~vyt~V~~~~~WI~~~~~  224 (227)
T 2psx_A          207 GVYTNLCKFTKWIQETIQ  224 (227)
T ss_dssp             EEEEEGGGCHHHHHHHHH
T ss_pred             cEEEEHHHhHHHHHHHHh
Confidence            799999999999987653


No 190
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.63  E-value=3e-16  Score=141.19  Aligned_cols=106  Identities=32%  Similarity=0.615  Sum_probs=88.1

Q ss_pred             CCcEEEEecCccCCC-CCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcE
Q psy16044        157 KQQCVATGWGRVKPK-GDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRW  235 (436)
Q Consensus       157 ~~~~~~~GwG~~~~~-~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~  235 (436)
                      +..|+++|||.+... ...+..|+++.+++++.+.|...+..  ...+.||||+...+..++|.|||||||+++   +  
T Consensus       123 ~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--  195 (235)
T 1ton_A          123 GSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKD--NVTDVMLCAGEMEGGKDTCAGDSGGPLICD---G--  195 (235)
T ss_dssp             TCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGST--TGGGGEEEEECTTCSCBCCTTCTTCEEEET---T--
T ss_pred             CCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcC--cCCCCeEeeccCCCCCcCCCCCCccccEEC---C--
Confidence            578999999998754 44567899999999999999998864  345689999976666899999999999984   2  


Q ss_pred             EEEEEEeEcCCCCC---CCcccccccceecCCccccC
Q psy16044        236 YLAGITSFGSGYCG---VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       236 ~l~GI~S~g~~~C~---~~~~y~~v~~~~~~~~~~~~  269 (436)
                      +|+||+|||...|+   .+.+|++|.+|..||.+.+.
T Consensus       196 ~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~  232 (235)
T 1ton_A          196 VLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK  232 (235)
T ss_dssp             EEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             EEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence            69999999965575   46799999999999987653


No 191
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.63  E-value=3.1e-16  Score=140.96  Aligned_cols=90  Identities=29%  Similarity=0.381  Sum_probs=76.1

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---C
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---G  251 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---~  251 (436)
                      +..|+...+.+++.+.|+..+.. ....+.|||++...+..++|.|||||||+++.     .|+||+|||.+.|+.   +
T Consensus       134 ~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-----~l~Gi~S~g~~~C~~~~~p  207 (234)
T 3s9c_A          134 PDVPHCTNIFIVKHKWCEPLYPW-VPADSRTLCAGILKGGRDTCHGDSGGPLICNG-----EMHGIVAGGSEPCGQHLKP  207 (234)
T ss_dssp             CSSCEEEEEEEECGGGTTTTCTT-SCTTSSEEEEECTTSSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCC
T ss_pred             CccccccceEecCHHHhhhcccC-CCCCcceEEeecCCCCCccCCCCCCCeEEEeC-----CcEEEEEEeCCCCCCCCCC
Confidence            45789999999999999988753 34567999999877778999999999999853     399999999886764   5


Q ss_pred             cccccccceecCCccccCC
Q psy16044        252 IRYSHRQPRLINGKESIRG  270 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~~~  270 (436)
                      .+|++|.+|..||.+.+..
T Consensus       208 ~vyt~V~~y~~WI~~~i~~  226 (234)
T 3s9c_A          208 AVYTKVFDYNNWIQSIIAG  226 (234)
T ss_dssp             EEEEEGGGGHHHHHHHHHT
T ss_pred             cEEEEhHHhHHHHHHHHcC
Confidence            7999999999999877653


No 192
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.62  E-value=2.9e-16  Score=153.34  Aligned_cols=93  Identities=29%  Similarity=0.447  Sum_probs=77.2

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCC---CCCCCccCCCCCeeeeEe-cCCcEEEEEEEeEcCCCCC-
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD---GFSGACIGDSGGPLQCSL-KDGRWYLAGITSFGSGYCG-  249 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~---~~~~~C~gDsGgPl~~~~-~~~~~~l~GI~S~g~~~C~-  249 (436)
                      +..|+++.+.+++.+.|...+..  ..++.||||+...   ...++|+|||||||++.. .+++|+|+||+|||.+|+. 
T Consensus       322 ~~~L~~~~v~ii~~~~C~~~~~~--~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~  399 (424)
T 3nxp_A          322 PSVLQVVNLPIVERPVCKDSTRI--RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  399 (424)
T ss_dssp             CSBCEEEEEEBCCHHHHHHTCSS--CCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTC
T ss_pred             CccceEEEeeEEcHHHhhhhccC--cCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCC
Confidence            56799999999999999988753  4567999998643   236899999999999975 3789999999999988442 


Q ss_pred             -CCcccccccceecCCccccC
Q psy16044        250 -VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       250 -~~~~y~~v~~~~~~~~~~~~  269 (436)
                       .+.+|++|..|..||.+++.
T Consensus       400 ~~pgVyT~Vs~y~~WI~~~i~  420 (424)
T 3nxp_A          400 GKYGFYTHVFRLKKWIQKVID  420 (424)
T ss_dssp             CSCEEEEECTTCHHHHHHHHH
T ss_pred             CCCEEEEEHHHHHHHHHHHHH
Confidence             36799999999999987653


No 193
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=99.62  E-value=9.3e-16  Score=137.40  Aligned_cols=148  Identities=20%  Similarity=0.195  Sum_probs=93.4

Q ss_pred             CeeeEEEEecCC-EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCC
Q psy16044         55 PHWCGAVLIHPS-WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRP  133 (436)
Q Consensus        55 ~~~C~GtLIs~~-~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~  133 (436)
                      .+.|+|+||+++ ||||+|||+.+.       ..+.|.++..         +.+.++-+..+     ..+|||||||+.+
T Consensus        55 ~~~gsG~iI~~~g~ILTnaHvv~~~-------~~i~V~~~~g---------~~~~a~vv~~d-----~~~DlAllkl~~~  113 (239)
T 1l1j_A           55 ASLGSGFIFDPEGYILTNYHVVGGA-------DNITVTMLDG---------SKYDAEYIGGD-----EELDIAVIKIKAS  113 (239)
T ss_dssp             EEEEEEEEEETTTEEEEEHHHHSSC-------SSCEEECTTS---------CEEEBCCCEEE-----TTTTEEEEEBCCS
T ss_pred             CceEEEEEEeCCCEEEEChHHhCCC-------CEEEEEECCC---------CEEEEEEEEEc-----CCCCEEEEEEcCC
Confidence            467999999986 999999998652       3567777631         12233322222     3589999999987


Q ss_pred             CCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCC
Q psy16044        134 TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDG  213 (436)
Q Consensus       134 ~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~  213 (436)
                      +    ..+++++|+..  ..+..++.++++||+.....        ....-+++...|.............++|+.    
T Consensus       114 ~----~~~~~~~l~~s--~~~~~G~~v~~iG~p~g~~~--------~vt~Givs~~~r~~~~~~~~~~~~~~i~td----  175 (239)
T 1l1j_A          114 D----KKFPYLEFGDS--DKVKIGEWAIAIGNPLGFQH--------TVTVGVVSATNRRIPKPDGSGYYVGLIQTD----  175 (239)
T ss_dssp             S----SCCCCCEECCG--GGCCTTCEEEEEECTTSSSC--------EEEEEEEEEEEEEEECTTSSCEEEEEEEES----
T ss_pred             C----CCCceEEecCc--cCCccccEEEEEECCCCCCC--------cEEEEEEeccccccccCCCccccCCEEEEC----
Confidence            5    23778899863  23457899999999764311        111222222222100000000123678874    


Q ss_pred             CCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        214 FSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       214 ~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                       ...|.|||||||+..  +|  .|+||+|++..
T Consensus       176 -a~i~~G~SGGPLv~~--~G--~vvGI~s~~~~  203 (239)
T 1l1j_A          176 -AAINPGNSGGPLLNI--HG--EVIGINTAIVN  203 (239)
T ss_dssp             -SCCCTTTTTSEEECS--SS--EEEEEECCCSC
T ss_pred             -CCCCCCCccHHhccC--CC--eEEEEEeeeec
Confidence             678999999999953  33  49999999864


No 194
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.62  E-value=5.7e-16  Score=138.20  Aligned_cols=88  Identities=32%  Similarity=0.557  Sum_probs=74.4

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC--CCc
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG--VGI  252 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~--~~~  252 (436)
                      +..|++..+.+++.+.|+..+..  ...+.|||++...+..+.|.|||||||++..     +|+||+|||.+|+.  .+.
T Consensus       132 ~~~l~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~~~p~  204 (223)
T 4i8h_A          132 PDVLKCLKAPILSDSSCKSAYPG--QITSNMFCAGYLEGGKDSCQGDSGGPVVCSG-----KLQGIVSWGSGCAQKNKPG  204 (223)
T ss_dssp             CSSCEEEEEEBCCHHHHHHHSTT--TCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSCTTCCE
T ss_pred             cccceEEEeeecCHHHHHHhhCC--CCCCCeEeccCCCCCCccCCCCCCCcEEECC-----EEEEEEEcCCCCCCCCCCe
Confidence            35699999999999999998864  3456999998777778999999999999853     69999999998553  367


Q ss_pred             ccccccceecCCccccC
Q psy16044        253 RYSHRQPRLINGKESIR  269 (436)
Q Consensus       253 ~y~~v~~~~~~~~~~~~  269 (436)
                      +|++|.+|..||.+.+.
T Consensus       205 vyt~v~~~~~WI~~~i~  221 (223)
T 4i8h_A          205 VYTKVCNYVSWIKQTIA  221 (223)
T ss_dssp             EEEEGGGGHHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHHh
Confidence            99999999999987653


No 195
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.62  E-value=4.4e-15  Score=132.63  Aligned_cols=166  Identities=18%  Similarity=0.168  Sum_probs=98.8

Q ss_pred             CCCcceEEEeeeccC--C--CCCCeeeEEEEecCC-EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeee
Q psy16044         36 GAWPWQVSLQVLHPR--L--GLMPHWCGAVLIHPS-WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVE  110 (436)
Q Consensus        36 ~~~Pw~v~i~~~~~~--~--~~~~~~C~GtLIs~~-~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~  110 (436)
                      .--|.+|.|......  .  ......++|+||+++ ||||||||+.+       ...+.|.++..         ..+.++
T Consensus        39 ~~~~sVV~I~~~~~~~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~-------~~~i~V~~~~g---------~~~~a~  102 (231)
T 3tjo_A           39 KIAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTN-------KHRVKVELKNG---------ATYEAK  102 (231)
T ss_dssp             HHGGGEEEEEEEEECTTSSCEEEEEEEEEEECSTTCEEEEETTTCCS-------SSEEEEECTTS---------CEEEEE
T ss_pred             HhcCcEEEEEEEeccccCCCccccceEEEEEEeCCCEEEEchhcccC-------CceEEEEcCCC---------CEEEEE
Confidence            346888998764421  0  011257999999998 99999999965       24566665421         234444


Q ss_pred             EEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhh
Q psy16044        111 RIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISV  190 (436)
Q Consensus       111 ~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~  190 (436)
                      .+..++.     +|||||||+.+..     +.++.|+..  ..+..+..++++||+....     ..+....+.-.....
T Consensus       103 v~~~d~~-----~DlAlL~l~~~~~-----~~~~~l~~~--~~~~~G~~v~~~G~p~g~~-----~~~~~g~vs~~~~~~  165 (231)
T 3tjo_A          103 IKDVDEK-----ADIALIKIDHQGK-----LPVLLLGRS--SELRPGEFVVAIGSPFSLQ-----NTVTTGIVSTTQRGG  165 (231)
T ss_dssp             EEEEETT-----TTEEEEECCCSSC-----CCCCCBCCG--GGCCTTCEEEEEEEEETTE-----EEEEEEEEEECC---
T ss_pred             EEEecCC-----CCEEEEEecCCCC-----CCceecCCc--CCCCCCCEEEEEECCCCCC-----CceeeEEEeeccccc
Confidence            5555654     7999999997633     567777653  2355789999999985321     111111121111111


Q ss_pred             hhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        191 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       191 C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      +...+.   .....++++.     ...|.|||||||+..  +|+  |+||+||+..
T Consensus       166 ~~~~~~---~~~~~~i~~d-----a~i~~G~SGGPLv~~--~G~--vVGI~s~~~~  209 (231)
T 3tjo_A          166 KELGLR---NSDMDYIQTD-----AIINYGNAGGPLVNL--DGE--VIGINTLKVT  209 (231)
T ss_dssp             -------------CCEEES-----SCCCTTTTTSEEECT--TSC--EEEEEEEEEE
T ss_pred             cccccC---CCcccEEEEc-----CCcCCCCchhHeecC--CCe--EEEEEeEEec
Confidence            111000   0111345543     568899999999942  343  9999999753


No 196
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.62  E-value=4.9e-16  Score=138.61  Aligned_cols=88  Identities=33%  Similarity=0.482  Sum_probs=73.0

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC---CC
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG---VG  251 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~---~~  251 (436)
                      +..|+++.+++++.++|+..+..  ...+.|||++...+..+.|.|||||||+++.     +|+||+|||...|+   .+
T Consensus       131 ~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p  203 (224)
T 2qxi_A          131 PSDLMCVDVKLISPQDCTKVYKD--LLENSMLCAGIPDSKKNACNGDSGGPLVCRG-----TLQGLVSWGTFPCGQPNDP  203 (224)
T ss_dssp             CSBCEEEEEEEECHHHHHHHHGG--GCCTTEEEEECTTCCCBCCTTCTTCEEEETT-----EEEEEEEECCSSSCCTTCC
T ss_pred             ChhheEEEeeecCHHHhhHHhcC--cCCCCeEEecCCCCCCccCCCCccccEEECC-----EEEEEEEeCCCCCCCCCCC
Confidence            35699999999999999988753  3456999999766668999999999999842     59999999954575   36


Q ss_pred             cccccccceecCCccccC
Q psy16044        252 IRYSHRQPRLINGKESIR  269 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~~  269 (436)
                      .+|++|.+|..||.+.+.
T Consensus       204 ~vyt~V~~~~~WI~~~~~  221 (224)
T 2qxi_A          204 GVYTQVCKFTKWINDTMK  221 (224)
T ss_dssp             EEEEEGGGSHHHHHHHHH
T ss_pred             eEEEEHHHHHHHHHHHHh
Confidence            799999999999987653


No 197
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.61  E-value=2.6e-16  Score=141.78  Aligned_cols=105  Identities=29%  Similarity=0.561  Sum_probs=87.3

Q ss_pred             CCcEEEEecCccC-CCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcE
Q psy16044        157 KQQCVATGWGRVK-PKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRW  235 (436)
Q Consensus       157 ~~~~~~~GwG~~~-~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~  235 (436)
                      +..++++|||.+. ..+..+..|+++.+++++.+.|+..+..  ...+.|||++...+..++|.|||||||+++   +  
T Consensus       125 ~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--  197 (237)
T 1gvz_A          125 GSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPE--KMTEFVLCATHRDDSGSICLGDSGGALICD---G--  197 (237)
T ss_dssp             TCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGG--GCCTTEEEEECSSTTCEECGGGTTCEEEET---T--
T ss_pred             CCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhh--cCCCceEEEeeCCCCCccCCCCccCcEeeC---C--
Confidence            5789999999874 3455677899999999999999987753  346799999986666889999999999984   2  


Q ss_pred             EEEEEEeEcCCCCC---CCcccccccceecCCcccc
Q psy16044        236 YLAGITSFGSGYCG---VGIRYSHRQPRLINGKESI  268 (436)
Q Consensus       236 ~l~GI~S~g~~~C~---~~~~y~~v~~~~~~~~~~~  268 (436)
                      +|+||+|||...|+   .+.+|++|..|..||.+.+
T Consensus       198 ~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~  233 (237)
T 1gvz_A          198 VFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETI  233 (237)
T ss_dssp             EEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHH
T ss_pred             EEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence            69999999984475   4679999999999998765


No 198
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=99.59  E-value=9.1e-15  Score=137.73  Aligned_cols=169  Identities=17%  Similarity=0.142  Sum_probs=101.0

Q ss_pred             CCCcceEEEeeeccCCCCCCeeeEEEEecC-CEEEecCCCcCCCCCC--CCCCcceEEEeccccCCccCCceEEEeeeEE
Q psy16044         36 GAWPWQVSLQVLHPRLGLMPHWCGAVLIHP-SWVVTAAHCIHNDIFS--LPIPELWTAVLGDWDRTEEEKSEVRIPVERI  112 (436)
Q Consensus        36 ~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~-~~VLTAAhC~~~~~~~--~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i  112 (436)
                      ...|++|.|......   ....|+|+||++ .||||||||+.+....  ......+.|.++..         +.+.++-+
T Consensus        14 ~~~~svV~I~~~~~~---~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g---------~~~~a~vv   81 (324)
T 1y8t_A           14 KVVPSVVMLETDLGR---QSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDG---------RTAPFTVV   81 (324)
T ss_dssp             HHGGGEEEEEEEC-------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTC---------CEECEEEE
T ss_pred             HhcCcEEEEEEEccC---CCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCC---------CEEEEEEE
Confidence            457999999865321   157899999998 6999999999653100  00023567777631         22333322


Q ss_pred             EeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhh
Q psy16044        113 RVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCR  192 (436)
Q Consensus       113 ~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~  192 (436)
                      ..+     ..+|||||||+.+.     .++|++|+..  ..+..+..++++||......     ..   ...+++...+.
T Consensus        82 ~~d-----~~~DlAllkl~~~~-----~~~~~~l~~~--~~~~~G~~v~~~G~p~g~~~-----~~---~~G~vs~~~~~  141 (324)
T 1y8t_A           82 GAD-----PTSDIAVVRVQGVS-----GLTPISLGSS--SDLRVGQPVLAIGSPLGLEG-----TV---TTGIVSALNRP  141 (324)
T ss_dssp             ECC-----TTTTEEEEEECSCC-----SCCCCEECCS--TTCCTTCEEEEEECGGGCTT-----EE---EEEEEEEEEEE
T ss_pred             EeC-----CCCCEEEEEECCCC-----CCceEEecCc--ccCCCCCEEEEEEcCCCCCC-----cE---eeeEEeecccc
Confidence            222     35899999999762     3678899763  33557899999999543211     00   11111111110


Q ss_pred             hh----cCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        193 DK----YGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       193 ~~----~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      ..    .+. ......++|+.     ...|.|||||||+..  +|  .|+||+|++..
T Consensus       142 ~~~~~~~g~-~~~~~~~i~~d-----~~~~~G~SGGPlv~~--~G--~vvGI~s~~~~  189 (324)
T 1y8t_A          142 VSTTGEAGN-QNTVLDAIQTD-----AAINPGNSGGALVNM--NA--QLVGVNSAIAT  189 (324)
T ss_dssp             ECC--------CCCEEEEEEC-----SCCCTTCTTEEEECT--TS--EEEEEEEEECC
T ss_pred             cccccccCc-ccccCCEEEEc-----CCCCCCCccCcEECC--CC--eEEEEEeeecc
Confidence            00    000 01123688884     678999999999963  34  59999999754


No 199
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.59  E-value=3.9e-16  Score=140.87  Aligned_cols=89  Identities=31%  Similarity=0.500  Sum_probs=70.0

Q ss_pred             ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC---
Q psy16044        174 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV---  250 (436)
Q Consensus       174 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~---  250 (436)
                      .+..|+++.+++++.++|+..+..  ...+.|||++...+..+.|.|||||||+++   +  +|+||+|||...|+.   
T Consensus       146 ~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~C~~~~~  218 (240)
T 1sgf_A          146 YPDDLQCVNLKLLPNEDCDKAHEM--KVTDAMLCAGEMDGGSYTCEHDSGGPLICD---G--ILQGITSWGPEPCGEPTE  218 (240)
T ss_dssp             ------CEEEEEECTHHHHTTCSS--BCCTTEEEEEECSSSEEECCCCTTCEEEET---T--EEEEEECCCCSSCCCSSC
T ss_pred             CCccccEEeeeEeCHHHhhhhhCC--CcCCCeEeEccCCCCCCCCCCCCcCcEEEc---c--EEEEEEEECCCCCCCCCC
Confidence            346799999999999999987753  346799999986666789999999999984   2  699999999655753   


Q ss_pred             CcccccccceecCCccccC
Q psy16044        251 GIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       251 ~~~y~~v~~~~~~~~~~~~  269 (436)
                      +.+|++|..|..||.+.+.
T Consensus       219 p~vyt~V~~~~~WI~~~~~  237 (240)
T 1sgf_A          219 PSVYTKLIKFSSWIRETMA  237 (240)
T ss_dssp             CEEEEESGGGHHHHHHHHH
T ss_pred             CeEEEeHHHHHHHHHHHHh
Confidence            6799999999999987654


No 200
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.59  E-value=4.8e-16  Score=141.20  Aligned_cols=119  Identities=17%  Similarity=0.164  Sum_probs=80.3

Q ss_pred             ccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCcc--ccceEEEEEeeCcccccc---c
Q psy16044        279 TSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLV--SKLRQIRVPLHNISVCRD---K  353 (436)
Q Consensus       279 ~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~--~~l~~~~~~~~~~~~C~~---~  353 (436)
                      ...||||||||++|+.                    .+..++++|||++.......  ..++...++.++...|..   .
T Consensus       109 ~~~nDIALLrL~~~v~--------------------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~  168 (268)
T 1arb_A          109 YATSDFTLLELNNAAN--------------------PAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNSTSPTSFVA  168 (268)
T ss_dssp             ETTTTEEEEEESSCCC--------------------GGGCCEEBCEECCSCCCSCEEEEECGGGCSCEEEEECSCCEEEC
T ss_pred             CCCCceEEEEecCCCC--------------------CCCceEEeCcCccCCCCCcceeeccCCcccEEEEeecccccccc
Confidence            4579999999999742                    24468999999886543211  112223444555555642   2


Q ss_pred             cCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC-CCCCC--CCCeEEEeCcccHH
Q psy16044        354 YGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS-GCAKS--GYPDVYTKLSFYLP  423 (436)
Q Consensus       354 ~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~-~c~~~--~~p~v~t~V~~~~~  423 (436)
                      +..  .+.+.|+|++...+..++|.|||||||++.  +  ++|+||+|||. .|...  ..|++||||+.|.+
T Consensus       169 ~~~--~~~~~~iCag~~~~~gdtC~gdsGgPl~~~--~--~~~~Gi~s~g~~~C~~~~~~~p~vyt~v~~~~~  235 (268)
T 1arb_A          169 WGG--GAGTTHLNVQWQPSGGVTEPGSSGSPIYSP--E--KRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWT  235 (268)
T ss_dssp             TTS--SSCSSEEEEECCTTSCCCCTTCTTCEEECT--T--SCEEEEEEECSCCTTCCGGGSEEEEEEHHHHHH
T ss_pred             ccc--cccCCeEEEeeecCCCCCccCcccCCcEee--C--CEEEEEEeecCcccCCCCCCCCceEEEeeeeec
Confidence            322  356899999643112269999999999973  2  35999999997 68765  37999999986654


No 201
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=99.56  E-value=1.5e-14  Score=137.42  Aligned_cols=169  Identities=19%  Similarity=0.185  Sum_probs=103.9

Q ss_pred             CCcceEEEeeeccCCCCC--------CeeeEEEEecCC-EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEE
Q psy16044         37 AWPWQVSLQVLHPRLGLM--------PHWCGAVLIHPS-WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRI  107 (436)
Q Consensus        37 ~~Pw~v~i~~~~~~~~~~--------~~~C~GtLIs~~-~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~  107 (436)
                      --|-+|.|.........+        ...++|+||+++ ||||||||+.+       ...+.|.+...         ..+
T Consensus        26 ~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~-------~~~i~V~~~~g---------~~~   89 (348)
T 3qo6_A           26 NTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRG-------ASDLRVTLADQ---------TTF   89 (348)
T ss_dssp             HGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTT-------CSEEEEECTTS---------CEE
T ss_pred             hCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCC-------CcEEEEEECCC---------CEE
Confidence            346777776532211110        246999999998 99999999865       24566665421         223


Q ss_pred             eeeEEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccc
Q psy16044        108 PVERIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHN  187 (436)
Q Consensus       108 ~v~~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~  187 (436)
                      ..+.+..++.     +|||||||+.|.    ..++|++|+..  ..+..+..++++||+.....     .+....+..+.
T Consensus        90 ~a~~v~~d~~-----~DlAlLkl~~~~----~~~~~i~l~~s--~~~~~G~~v~~iG~p~g~~~-----~~~~g~vs~~~  153 (348)
T 3qo6_A           90 DAKVVGFDQD-----KDVAVLRIDAPK----NKLRPIPVGVS--ADLLVGQKVFAIGNPFGLDH-----TLTTGVISGLR  153 (348)
T ss_dssp             EEEEEEEEGG-----GTEEEEECCCCG----GGCCCCCBCCS--TTCCTTCEEEEEECGGGCTT-----EEEEEEEEEEE
T ss_pred             EEEEEEEcCc-----CCEEEEEEcCCC----CCceeEEecCc--ccCCCCCEEEEEECCCCCCC-----cEeEEEEEeec
Confidence            4444455554     699999999863    24788888764  33567899999999865422     22222233222


Q ss_pred             hhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCC
Q psy16044        188 ISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCG  249 (436)
Q Consensus       188 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~  249 (436)
                      ...|......   ....+++..     ...|.|||||||+..  +|+  |+||+|++...++
T Consensus       154 ~~~~~~~~~~---~~~~~i~~d-----a~i~~G~SGGPLvn~--~G~--vvGI~s~~~~~~~  203 (348)
T 3qo6_A          154 REISSAATGR---PIQDVIQTD-----AAINPGNSGGPLLDS--SGT--LIGINTAIYSPSG  203 (348)
T ss_dssp             EEECCSSSSS---CEEEEEEEC-----SCCCTTCTTCEEECT--TSC--EEEEEEEEECSSS
T ss_pred             cccccccCCC---cccCEEEEe-----CCcCCCCcHHHhhCC--CCe--EEEEEEeeecCCC
Confidence            2222211110   001234432     578999999999953  443  9999999876554


No 202
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=99.55  E-value=2e-14  Score=135.14  Aligned_cols=164  Identities=18%  Similarity=0.159  Sum_probs=103.4

Q ss_pred             CCcceEEEeeeccC--CC--CCCeeeEEEEecCC-EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeE
Q psy16044         37 AWPWQVSLQVLHPR--LG--LMPHWCGAVLIHPS-WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVER  111 (436)
Q Consensus        37 ~~Pw~v~i~~~~~~--~~--~~~~~C~GtLIs~~-~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~  111 (436)
                      --|.+|.|......  .+  .....|+|+||+++ ||||+|||+.+.       ..+.|.++..         ..+.++-
T Consensus        24 ~~~sVV~I~~~~~~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~-------~~i~V~~~~g---------~~~~a~v   87 (325)
T 1lcy_A           24 TAPAVVYIEILDRHPFLGREVPISNGSGFVVAADGLIVTNAHVVADR-------RRVRVRLLSG---------DTYEAVV   87 (325)
T ss_dssp             HGGGEEEEEEEEEETTTTEEEEEEEEEEEEEETTTEEEECHHHHTTC-------SEEEEECTTS---------CEEEEEE
T ss_pred             hCCcEEEEEEEecCccCCCccccccEEEEEEeCCCEEEECHHHcCCC-------CEEEEEeCCC---------CEEEEEE
Confidence            35788888643211  11  11367999999998 999999999652       4567766531         1223322


Q ss_pred             EEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhh
Q psy16044        112 IRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  191 (436)
Q Consensus       112 i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C  191 (436)
                      +...     ..+||||||++.+.     .+.+++|+..  ..+..++.++++||+....        +.....+++...|
T Consensus        88 ~~~d-----~~~DlAllkl~~~~-----~~~~~~l~~~--~~~~~G~~v~~~G~p~~~~--------~~v~~G~vs~~~~  147 (325)
T 1lcy_A           88 TAVD-----PVADIATLRIQTKE-----PLPTLPLGRS--ADVRQGEFVVAMGSPFALQ--------NTITSGIVSSAQR  147 (325)
T ss_dssp             EEEE-----TTTTEEEEECCCSS-----CCCCCCBCCG--GGCCTTCEEEECCCTTSSS--------SCCEEEEBCSCSC
T ss_pred             EEEC-----CCCCEEEEEEcCCC-----CCceEEeccc--ccCCCCCEEEEEECCCCCC--------CcEEeEEEecccc
Confidence            2222     35899999998763     2567888763  2355789999999986432        1234455555555


Q ss_pred             hhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcC
Q psy16044        192 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS  245 (436)
Q Consensus       192 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~  245 (436)
                      .............++|+.     ...|.|||||||+..  +|+  |+||++++.
T Consensus       148 ~~~~~g~~~~~~~~i~~d-----~~~~~G~SGGPl~~~--~G~--vVGI~s~~~  192 (325)
T 1lcy_A          148 PARDLGLPQTNVEYIQTD-----AAIDFGNAGGPLVNL--DGE--VIGVNTMKV  192 (325)
T ss_dssp             C---------CCCCEEES-----SCCSTTTTTSEEEET--TSC--EEEEEEEEE
T ss_pred             cccccCCCCCCCCEEEEc-----CCCCCCCccccEECC--CCE--EEEEEeEee
Confidence            421111011234789985     578999999999953  443  999999975


No 203
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.53  E-value=8e-14  Score=125.13  Aligned_cols=163  Identities=17%  Similarity=0.155  Sum_probs=101.9

Q ss_pred             CCCcceEEEeeeccCCC-----CCCeeeEEEEecCC-EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEee
Q psy16044         36 GAWPWQVSLQVLHPRLG-----LMPHWCGAVLIHPS-WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPV  109 (436)
Q Consensus        36 ~~~Pw~v~i~~~~~~~~-----~~~~~C~GtLIs~~-~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v  109 (436)
                      .--|-+|.|........     .....++|+||+++ ||||+|||+.+.       ..+.|.+..         ...+..
T Consensus        28 ~~~~sVV~I~~~~~~~~~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~-------~~~~V~~~~---------g~~~~a   91 (237)
T 3lgi_A           28 RAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA-------DQIIVALQD---------GRVFEA   91 (237)
T ss_dssp             HHGGGEEEEEEECCTTTCTTSCCEEEEEEEEEEETTTEEEEEHHHHTTC-------SEEEEECTT---------SCEEEE
T ss_pred             HhCCcEEEEEEEecccCcccccccceEEEEEEEeCCCEEEEeeeecCCC-------CEEEEEeCC---------CCEEEE
Confidence            34688888876543211     01347999999998 999999999652       445665532         123445


Q ss_pred             eEEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchh
Q psy16044        110 ERIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNIS  189 (436)
Q Consensus       110 ~~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~  189 (436)
                      +.+..||.     +|||||||+.+..     +.++.|+..  ..+..+..++++||+.....     .+....+..+...
T Consensus        92 ~vv~~d~~-----~DlAll~l~~~~~-----~~~~~l~~~--~~~~~G~~v~~~G~p~~~~~-----~~~~g~vs~~~~~  154 (237)
T 3lgi_A           92 LLVGSDSL-----TDLAVLKINATGG-----LPTIPINAR--RVPHIGDVVLAIGNPYNLGQ-----TITQGIISATGRI  154 (237)
T ss_dssp             EEEEEETT-----TTEEEEECCCSSC-----CCCCCCCTT--CCCCTTBEEEEEECGGGSCS-----EEEEEEEEEECCS
T ss_pred             EEEEEcCC-----CCEEEEEecCCCC-----CceEeccCc--ccCCCCCEEEEEECCCCCCC-----cEEEEEEEecccc
Confidence            55566665     6999999987642     567777753  34567899999999864311     1222222222211


Q ss_pred             hhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        190 VCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       190 ~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      .+..      ......++..     ...|.|||||||+..  +|+  |+||+|++..
T Consensus       155 ~~~~------~~~~~~i~~d-----~~i~~G~SGGPlv~~--~G~--vvGI~s~~~~  196 (237)
T 3lgi_A          155 GLNP------TGRQNFLQTD-----ASINHGNSGGALVNS--LGE--LMGINTLSFD  196 (237)
T ss_dssp             SCCT------TSCSCCEEEC-----SCCCTTCTTCEEECT--TCC--EEEEECCCCC
T ss_pred             cccC------CCcCCEEEEc-----CccCCCCchHHeeCC--CCe--EEEEEeeeec
Confidence            1111      0112345543     567999999999953  443  9999999754


No 204
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=99.52  E-value=1.2e-13  Score=130.50  Aligned_cols=165  Identities=18%  Similarity=0.174  Sum_probs=96.8

Q ss_pred             CCcceEEEeeeccC--C--CCCCeeeEEEEecCC-EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeE
Q psy16044         37 AWPWQVSLQVLHPR--L--GLMPHWCGAVLIHPS-WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVER  111 (436)
Q Consensus        37 ~~Pw~v~i~~~~~~--~--~~~~~~C~GtLIs~~-~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~  111 (436)
                      -.|.+|.|......  .  ......++|+||+++ ||||||||+.+       ...+.|.++..         ..+.++.
T Consensus        23 ~~~sVV~I~~~~~~~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~-------~~~i~V~~~~g---------~~~~a~~   86 (332)
T 3num_A           23 IAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTN-------KHRVKVELKNG---------ATYEAKI   86 (332)
T ss_dssp             HGGGEEEEEEEEECTTSSCEEEEEEEEEEEEETTTEEEECTTTCCT-------TSEEEEEETTS---------CEEEEEE
T ss_pred             hcCcEEEEEEEeccccCCCcceeeeEEEEEEeCCCEEEEChHHcCC-------CCEEEEEECCC---------CEEEEEE
Confidence            35778888653211  0  011357999999998 99999999965       24566666431         2345566


Q ss_pred             EEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhh
Q psy16044        112 IRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVC  191 (436)
Q Consensus       112 i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C  191 (436)
                      +..||.     +|||||+|+.+..     +.++.|+..  ..+..+..++++||+.....     .+....+.......+
T Consensus        87 ~~~d~~-----~DlAlL~l~~~~~-----~~~~~l~~~--~~~~~G~~v~~~G~p~g~~~-----~~~~g~vs~~~~~~~  149 (332)
T 3num_A           87 KDVDEK-----ADIALIKIDHQGK-----LPVLLLGRS--SELRPGEFVVAIGSPFSLQN-----TVTTGIVSTTQRGGK  149 (332)
T ss_dssp             EEEETT-----TTEEEEEECCSSC-----CCCCCBCCT--TSCCTTCEEEEECC-----C-----CEEEEEEEEC-----
T ss_pred             EEecCC-----CCeEEEEEcCCCC-----CceeeecCc--ccCCCCCEEEEEECCCCCCc-----ceeeeEEEeeccccc
Confidence            677776     6999999997632     567777653  34567899999999864321     112222222222111


Q ss_pred             hhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        192 RDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       192 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      ...+..   ....+++..     ...|.|||||||+..  +|+  |+||+||+..
T Consensus       150 ~~~~~~---~~~~~i~~d-----~~i~~G~SGGPlv~~--~G~--vvGI~s~~~~  192 (332)
T 3num_A          150 ELGLRN---SDMDYIQTD-----AIINYGNAGGPLVNL--DGE--VIGINTLKVT  192 (332)
T ss_dssp             ------------CCEEES-----SCCCTTTTTSEEEET--TSC--EEEEEEEEEE
T ss_pred             ccCcCC---CcCCEEEEE-----CCcCCCCcHHHhhCC--CCc--EEEEEeeEec
Confidence            111110   111344543     467899999999953  343  9999999754


No 205
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.52  E-value=3.8e-15  Score=131.92  Aligned_cols=130  Identities=17%  Similarity=0.124  Sum_probs=89.6

Q ss_pred             CCCcccc-cccccccceeecccc--cccCCCCee-eeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeC
Q psy16044        271 AWPWQNL-ITSFLSAALLKLSRP--TSARDKGVR-AVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHN  346 (436)
Q Consensus       271 ~~p~~~~-~~~~~diali~l~~~--~~~~~~~v~-picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~  346 (436)
                      .||.|+. ....||||||||++|  +.++.. ++ +++|+...    ..++.|.++|||.+.....  ..|         
T Consensus        78 ~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~-v~~~~~l~~~~----~~g~~~~v~GwG~~~~~~~--~~l---------  141 (218)
T 3cp7_A           78 TSAEWANRGDFEHDYAFAVLETKGGTTVQQQ-VGTASPIAFNQ----PRGQYYSAYGYPAAAPFNG--QEL---------  141 (218)
T ss_dssp             ECHHHHHHCCGGGCCEEEEECCBTTBCHHHH-HSCCBCBCCSC----CSSCEEEEEECCCSTTCCS--SSC---------
T ss_pred             ECcccccCCCCcCCEEEEEEeCCCCcChhHh-cCcccceeecC----CCCCEEEEEeCCCCCCCCC--cee---------
Confidence            5888874 467899999999999  777666 88 89998532    3678999999997642111  111         


Q ss_pred             cccccccc-CCC-ccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHH
Q psy16044        347 ISVCRDKY-GDS-VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPW  424 (436)
Q Consensus       347 ~~~C~~~~-~~~-~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~W  424 (436)
                       ..|.... ... ......|+|+.        |.|||||||++. .+++++|+||+|||.+|...   .+|  -..|-+.
T Consensus       142 -~~C~~~~~~~~~~~~~~~~~Ca~--------~~GDSGGPlv~~-~~g~~~lvGIvS~G~gc~~~---~~~--~p~~~~~  206 (218)
T 3cp7_A          142 -HSCHGTATNDPMGSSTQGIPCNM--------TGGSSGGPWFLG-NGTGGAQNSTNSYGYTFLPN---VMF--GPYFGSG  206 (218)
T ss_dssp             -EEEEEECEECTTSSSCEEEECCC--------CTTCTTCEEEES-SSSSSCEEEECCEEETTEEE---EEE--ECCCCHH
T ss_pred             -eEeeeeEEcCCCCCceEEecCCC--------CCCCcCCeeEEc-cCCCeEEEEEEccccCCCCC---cEE--cCcCCHH
Confidence             4676532 211 11233789982        569999999996 36677899999999988641   233  3445677


Q ss_pred             HHHHHhh
Q psy16044        425 IRKQINI  431 (436)
Q Consensus       425 I~~~i~~  431 (436)
                      |+...+.
T Consensus       207 ~~~l~~~  213 (218)
T 3cp7_A          207 AQQNYNY  213 (218)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7665544


No 206
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.52  E-value=7e-15  Score=133.18  Aligned_cols=94  Identities=27%  Similarity=0.478  Sum_probs=77.8

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCc
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGI  252 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~  252 (436)
                      +..|+++.+++++.+.|+..........+.||||+...++.++|.|||||||++. .+++|+|+||+|||.+|+  +.+.
T Consensus       150 ~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~-~~~~~~l~GI~S~g~~C~~~~~p~  228 (247)
T 1ddj_A          150 AGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCF-EKDKYILQGVTSWGLGCARPNKPG  228 (247)
T ss_dssp             TTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEE-CSSSEEEEEEECGGGCCBBTTBCE
T ss_pred             CccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcCcEEEE-ECCcEEEEEEEEECCCCCCCCCCE
Confidence            3579999999999999987533233456799999977666899999999999997 478999999999998854  3468


Q ss_pred             ccccccceecCCccccC
Q psy16044        253 RYSHRQPRLINGKESIR  269 (436)
Q Consensus       253 ~y~~v~~~~~~~~~~~~  269 (436)
                      +|++|..|..||.+.+.
T Consensus       229 vyt~V~~y~~WI~~~~~  245 (247)
T 1ddj_A          229 VYVRVSRFVTWIEGVMR  245 (247)
T ss_dssp             EEEEGGGSHHHHHHHHH
T ss_pred             EEEEhHHhHHHHHHHhh
Confidence            99999999999987653


No 207
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.51  E-value=1.1e-14  Score=134.25  Aligned_cols=114  Identities=28%  Similarity=0.401  Sum_probs=96.2

Q ss_pred             CCCcEEEEecCccCCCC-CccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCc
Q psy16044        156 PKQQCVATGWGRVKPKG-DLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGR  234 (436)
Q Consensus       156 ~~~~~~~~GwG~~~~~~-~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~  234 (436)
                      .+..+.++|||.+...+ .....|+.+.+.+++.++|...+.......+.++|++...+..++|.|||||||++.. +++
T Consensus       154 ~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~-~~~  232 (276)
T 2vnt_A          154 FGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGR  232 (276)
T ss_dssp             TTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEE-TTE
T ss_pred             ccceEEEEEeeccccCCCCcchhheeeeeeEecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEee-CCe
Confidence            35778999999886554 3456788999999999999988766556667899988888778999999999999984 789


Q ss_pred             EEEEEEEeEcCCCCC--CCcccccccceecCCccccCC
Q psy16044        235 WYLAGITSFGSGYCG--VGIRYSHRQPRLINGKESIRG  270 (436)
Q Consensus       235 ~~l~GI~S~g~~~C~--~~~~y~~v~~~~~~~~~~~~~  270 (436)
                      |+|+||+|||.+||.  .+.+||+|.+|..||++.+..
T Consensus       233 ~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~WI~~~~~~  270 (276)
T 2vnt_A          233 MTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTKE  270 (276)
T ss_dssp             EEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHSC
T ss_pred             EEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhhh
Confidence            999999999998653  457999999999999987764


No 208
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.51  E-value=1.4e-14  Score=130.13  Aligned_cols=92  Identities=22%  Similarity=0.286  Sum_probs=77.8

Q ss_pred             ccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCcc
Q psy16044        176 SKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGIR  253 (436)
Q Consensus       176 ~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~~  253 (436)
                      ..|++..+++++.+.|+..+..  ...+.+||++...+..++|.|||||||++.. +++|+|+||+|||.+|+  +.+.+
T Consensus       134 ~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~v  210 (234)
T 2asu_B          134 TVLNVALLNVISNQECNIKHRG--RVRESEMCTEGLLAPVGACEGDYGGPLACFT-HNSWVLEGIIIPNRVCARSRWPAV  210 (234)
T ss_dssp             TBCEEEEEEEECHHHHHHHTTT--CCCTTEEEECCCSSCCBCCTTCTTCEEEEEE-TTEEEEEEEECCCSSSSCTTCCEE
T ss_pred             ccceEEEeeEEcHHHcccccCC--ccCcceEeecCCCCCCeeccCCCCCceEEEE-CCeEEEEEEEEcCCCCCCCCCCeE
Confidence            5799999999999999988743  3467999998876668999999999999985 78999999999998744  24689


Q ss_pred             cccccceecCCccccCC
Q psy16044        254 YSHRQPRLINGKESIRG  270 (436)
Q Consensus       254 y~~v~~~~~~~~~~~~~  270 (436)
                      |++|..|..||.+.+..
T Consensus       211 yt~V~~~~~WI~~~~~~  227 (234)
T 2asu_B          211 FTRVSVFVDWIHKVMRL  227 (234)
T ss_dssp             EEEGGGSHHHHHHHC--
T ss_pred             EEEHHHHHHHHHHHhhc
Confidence            99999999999887754


No 209
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.50  E-value=2e-14  Score=130.36  Aligned_cols=94  Identities=30%  Similarity=0.487  Sum_probs=79.0

Q ss_pred             ccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCC
Q psy16044        174 LVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVG  251 (436)
Q Consensus       174 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~  251 (436)
                      ....|+++.+++++.++|+..+..  ...+.||||+...+..++|.|||||||++. .+++|+|+||+|||.+|+  +.+
T Consensus       145 ~~~~L~~~~~~i~~~~~C~~~~~~--~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~-~~g~~~l~GI~S~g~~C~~~~~p  221 (250)
T 1aut_C          145 RTFVLNFIKIPVVPHNECSEVMSN--MVSENMLCAGILGDRQDACEGDSGGPMVAS-FHGTWFLVGLVSWGEGCGLLHNY  221 (250)
T ss_dssp             CSSBCEEEEEEEECHHHHHHHCSS--CCCTTEEEECCTTCCCBCCTTCTTCEEEEE-ETTEEEEEEEEEECSSSSCTTCC
T ss_pred             ccceeeEEEEEEecHHHhhHHhcc--CCCCCEEEeCCCCCCCCCCCCCCchheEEE-ECCeEEEEEEEEECCCCCCCCCC
Confidence            345799999999999999988754  345799999877666899999999999997 478999999999998743  246


Q ss_pred             cccccccceecCCccccCC
Q psy16044        252 IRYSHRQPRLINGKESIRG  270 (436)
Q Consensus       252 ~~y~~v~~~~~~~~~~~~~  270 (436)
                      .+|++|.+|..||.+.+..
T Consensus       222 ~vyt~V~~y~~WI~~~~~~  240 (250)
T 1aut_C          222 GVYTKVSRYLDWIHGHIRD  240 (250)
T ss_dssp             EEEECGGGTHHHHHHHHC-
T ss_pred             EEEEEHHHHHHHHHHHhhc
Confidence            7999999999999877653


No 210
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.49  E-value=1.6e-14  Score=126.43  Aligned_cols=118  Identities=19%  Similarity=0.148  Sum_probs=79.6

Q ss_pred             ccccceeecccc----cccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCC
Q psy16044        281 FLSAALLKLSRP----TSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGD  356 (436)
Q Consensus       281 ~~diali~l~~~----~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~  356 (436)
                      .+|||||||+.+    +.++.. ++|+||+.    ....++.+++.||+.-...   . ..+.+...+++.  +      
T Consensus        76 ~~DiAll~l~~~~~~~~~~~~~-v~pi~l~~----~~~~g~~v~v~G~p~g~~~---~-~~~~~~~g~v~~--~------  138 (200)
T 2w7s_A           76 KEDLAIVHVHETSTEGLNFNKN-VSYTKFAD----GAKVKDRISVIGYPKGAQT---K-YKMFESTGTINH--I------  138 (200)
T ss_dssp             SSSCEEEEECSBCTTSCBGGGS-CCCCCBCC----CCCTTCEEEEEECTTHHHH---T-SCEEEEEEEEEE--E------
T ss_pred             cceEEEEEECCCCCCccccccc-ccceeccc----cCCCCCEEEEEECCCCCCC---c-cceEEeEEEEEc--c------
Confidence            589999999996    777776 99999973    2457899999998642111   1 112334444432  1      


Q ss_pred             CccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCC-CCCCCeE-EEeCcccHHHHHHHHh
Q psy16044        357 SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCA-KSGYPDV-YTKLSFYLPWIRKQIN  430 (436)
Q Consensus       357 ~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~-~~~~p~v-~t~V~~~~~WI~~~i~  430 (436)
                          ...++|..     ...|.|||||||++.  ++  .|+||+||+..|+ ....+++ |+  +.|++||+++|+
T Consensus       139 ----~~~~~~~~-----~~~~~GdSGGPl~~~--~g--~lvGI~s~g~~~~~~~~~~~v~~~--~~~~~wI~~~~~  199 (200)
T 2w7s_A          139 ----SGTFMEFD-----AYAQPGNSGSPVLNS--KH--ELIGILYAGSGKDESEKNFGVYFT--PQLKEFIQNNIE  199 (200)
T ss_dssp             ----ETTEEEEC-----SCCCTTCTTCEEECT--TS--CEEEEEEEEC----CCCEEEEECC--HHHHHHHHHTSC
T ss_pred             ----CCCEEEEc-----ceeCCCCccCeEECc--CC--EEEEEEeccccCCCCccceeeecH--HHHHHHHHhhcc
Confidence                13456652     378999999999963  33  3999999998774 2222356 55  899999999875


No 211
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=99.48  E-value=2.8e-13  Score=127.08  Aligned_cols=162  Identities=17%  Similarity=0.146  Sum_probs=99.7

Q ss_pred             CCcceEEEeeeccCCC-----CCCeeeEEEEecCC-EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeee
Q psy16044         37 AWPWQVSLQVLHPRLG-----LMPHWCGAVLIHPS-WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVE  110 (436)
Q Consensus        37 ~~Pw~v~i~~~~~~~~-----~~~~~C~GtLIs~~-~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~  110 (436)
                      -.|.+|.|........     .....|+|+||+++ ||||+|||+.+.       ..+.|.++..         ..+..+
T Consensus        18 ~~~sVV~I~~~~~~~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~-------~~i~V~~~~g---------~~~~a~   81 (318)
T 1te0_A           18 AAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA-------DQIIVALQDG---------RVFEAL   81 (318)
T ss_dssp             HGGGEEEEEEEEECSSSSCCEEEEEEEEEEECSTTCEEEEEHHHHTTC-------SEEEEECTTS---------CEEEEE
T ss_pred             cCCcEEEEEeEeccCCcccccccCccEEEEEEeCCCEEEECHHHcCCC-------CEEEEEeCCC---------CEEEEE
Confidence            3578888866532211     01478999999998 999999999652       3456665431         122333


Q ss_pred             EEEeCCCCCCCCCceeEEEeCCCCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhh
Q psy16044        111 RIRVHEEFHNYHHDIALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISV  190 (436)
Q Consensus       111 ~i~~hp~y~~~~~DiAll~L~~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~  190 (436)
                      -+..++     .+||||||++.+-     .+.+++|+..  ..+..+..++++||.....     .   .....+++...
T Consensus        82 v~~~d~-----~~DlAllk~~~~~-----~~~~~~l~~~--~~~~~G~~v~~~G~p~g~~-----~---~~~~g~vs~~~  141 (318)
T 1te0_A           82 LVGSDS-----LTDLAVLIIKATG-----GLPTIPINAR--RVPHIGDVVLAIGNPYNLG-----Q---TITQGIISATG  141 (318)
T ss_dssp             EEEEET-----TTTEEEEECCCSS-----CCCCCCCCTT--CCCCTTCEEEEECCCSSSS-----C---CEEEEEEEECC
T ss_pred             EEEeCC-----CceEEEEEEeCCC-----CCceEEeeCc--cCCCCCCEEEEEEcCCCCC-----C---cEEeeEEeccc
Confidence            222333     4899999998762     3677888753  3456789999999753221     1   11122222111


Q ss_pred             hhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        191 CRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       191 C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      . ..+..  .....++|+.     ...|.|+|||||+..  +|  .|+||++++..
T Consensus       142 ~-~~~~~--~~~~~~i~~d-----~~~~~G~SGGPl~~~--~G--~vvGI~s~~~~  185 (318)
T 1te0_A          142 R-IGLNP--TGRQNFLQTD-----ASINHGNSGGALVNS--LG--ELMGINTLSFD  185 (318)
T ss_dssp             C-CCCCT--TCSCCSEEES-----SCCCTTTTTSEEECT--TC--CEEEEEECCSS
T ss_pred             c-cccCC--CCcCCEEEEC-----CCCCCCCCcCceECC--CC--eEEEEEeeeec
Confidence            1 01110  1123678874     578999999999963  44  39999999865


No 212
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.46  E-value=6.8e-14  Score=127.88  Aligned_cols=119  Identities=16%  Similarity=0.113  Sum_probs=84.5

Q ss_pred             ccccceeecccccc---cCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCC
Q psy16044        281 FLSAALLKLSRPTS---ARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDS  357 (436)
Q Consensus       281 ~~diali~l~~~~~---~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~  357 (436)
                      .+|||||||.+++.   ++.. ++|+||+...  ....++.++++|||...     ...++.....++..          
T Consensus        91 ~~DIALLkL~~~~~~~~~~~~-v~pi~L~~~~--~~~~g~~v~v~Gwg~~~-----~~~~~~~~~g~i~~----------  152 (268)
T 1wcz_A           91 EGDLAIVKFSPNEQNKHIGEV-VKPATMSNNA--ETQVNQNITVTGYPGDK-----PVATMWESKGKITY----------  152 (268)
T ss_dssp             SSCCEEEEECCCTTSCCHHHH-SCCCCBCCCS--SCCTTCEEEEEECCTTS-----STTCEEEEEEEEEE----------
T ss_pred             CCcEEEEEecCcccccccccc-cceeeccccc--ccCCCCEEEEEECCCCC-----CCceEEeecceEEe----------
Confidence            58999999999973   4445 8999998643  24578999999999643     12233333333321          


Q ss_pred             ccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHhh
Q psy16044        358 VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQINI  431 (436)
Q Consensus       358 ~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~  431 (436)
                        +...++|..     ..+|.|||||||++.  .+  .|+||+|||..|+. . +.+|+ ++.|++||+++|+.
T Consensus       153 --~~~~~i~~~-----~~~c~GdSGGPLv~~--~g--~lvGIvS~G~~~~~-~-~~~~~-~~~~~~wI~~~i~~  212 (268)
T 1wcz_A          153 --LKGEAMQYD-----LSTTGGNSGSPVFNE--KN--EVIGIHWGGVPNEF-N-GAVFI-NENVRNFLKQNIED  212 (268)
T ss_dssp             --EETTEEEES-----BCCCTTCTTCEEECT--TS--CEEEEEEEEETTTE-E-EEEEC-CHHHHHHHHHHCTT
T ss_pred             --eCCCeEEEe-----cccCCCCccCeEEcc--CC--EEEEEEeCCccCCc-c-eeEEc-CHHHHHHHHHHHHh
Confidence              234567752     478999999999963  23  49999999988864 2 45554 78999999998854


No 213
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.45  E-value=3.7e-14  Score=124.53  Aligned_cols=118  Identities=15%  Similarity=0.163  Sum_probs=79.5

Q ss_pred             ccccceeeccc--------ccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccccc
Q psy16044        281 FLSAALLKLSR--------PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRD  352 (436)
Q Consensus       281 ~~diali~l~~--------~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~  352 (436)
                      .+|||||||+.        ++.++.. ++|+||+.    ....++.+++.|||.....   ...+ ......+..     
T Consensus        75 ~~DiAll~l~~~~~~~~~~~~~~~~~-v~pi~l~~----~~~~g~~~~~~G~g~~~~~---~~~~-~~~~g~v~~-----  140 (204)
T 2vid_A           75 KEDVSVIQVEERAIERGPKGFNFNDN-VTPFKYAA----GAKAGERIKVIGYPHPYKN---KYVL-YESTGPVMS-----  140 (204)
T ss_dssp             SSCCEEEEECSEEEEEETTEEEHHHH-CCCCCBCS----CCCTTCEEEEEECCCCCC-----CCC-EEEEEEEEE-----
T ss_pred             CCeEEEEEEcCccccccccccccccc-ccccccCC----cCCCCCEEEEEeCCCCCCC---Ccce-EeeccEEee-----
Confidence            57999999995        4556655 89999974    2457899999999974321   1112 111112211     


Q ss_pred             ccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC---CCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        353 KYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG---CAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       353 ~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~---c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                             +...++|..     ...|.|||||||++.  ++  .|+||+||+..   |...+. .+|.. +.|++||+++|
T Consensus       141 -------~~~~~~~~~-----~~~~~GdSGGPl~~~--~g--~lvGI~s~g~~~~~~~~~~~-~~~~~-~~~~~wI~~~~  202 (204)
T 2vid_A          141 -------VEGSSIVYS-----AHTESGNSGSPVLNS--NN--ELVGIHFASDVKNDDNRNAY-GVYFT-PEIKKFIAENI  202 (204)
T ss_dssp             -------EETTEEEEC-----CCCCGGGTTCEEECT--TS--CEEEEEEEECC---CCCCEE-EECCC-HHHHHHHHHHS
T ss_pred             -------ccCCeEEEe-----cccCCCCccCcEECC--CC--eEEEEEecCccCCCcccccc-eeEeC-HHHHHHHHhhc
Confidence                   134578863     378999999999963  23  49999999973   444332 34444 88999999987


Q ss_pred             h
Q psy16044        430 N  430 (436)
Q Consensus       430 ~  430 (436)
                      +
T Consensus       203 ~  203 (204)
T 2vid_A          203 D  203 (204)
T ss_dssp             C
T ss_pred             C
Confidence            5


No 214
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.45  E-value=1.6e-13  Score=125.83  Aligned_cols=120  Identities=17%  Similarity=0.137  Sum_probs=84.2

Q ss_pred             ccccceeecccccc---cCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCC
Q psy16044        281 FLSAALLKLSRPTS---ARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDS  357 (436)
Q Consensus       281 ~~diali~l~~~~~---~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~  357 (436)
                      .+|||||||++++.   +... ++|+||+...  ....++.|+++|||....     ..++......+..          
T Consensus        91 ~~DIALLkL~~~~~~~~~~~~-v~pi~L~~~~--~~~~g~~v~v~Gwg~~~~-----~~~~~~~~g~i~~----------  152 (274)
T 2o8l_A           91 EGDLAIVKFSPNEQNKHIGEV-VKPATMSNNA--ETQTNQNITVTGYPGDKP-----VATMWESKGKITY----------  152 (274)
T ss_dssp             SSCCEEEEECCCTTSCCTTTS-SCCCEECCCT--TCCTTCEEEEEECCTTSS-----TTCEEEEEEEEEE----------
T ss_pred             CCcEEEEEecCcccccccccc-cccccccccc--cccCCCEEEEEECCCCCC-----CceEEecCceEEe----------
Confidence            58999999999973   6666 9999998543  346789999999996431     1122222222211          


Q ss_pred             ccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHhhh
Q psy16044        358 VELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQINIA  432 (436)
Q Consensus       358 ~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  432 (436)
                        +...++|..     ...|.|||||||++.  .+  .|+||+|||..|+. . +.+| .++.|++||++.|+..
T Consensus       153 --~~~~~i~~~-----~~~c~GdSGGPLv~~--~g--~lvGIvS~G~~~~~-~-~~~~-~~~~~~~wI~~~i~~~  213 (274)
T 2o8l_A          153 --LKGEAMQYD-----LSTTGGNSGSPVFNE--KN--EVIGIHWGGVPNEF-N-GAVF-INENVRNFLKQNIEDI  213 (274)
T ss_dssp             --EETTEEEES-----CCCCTTCTTCEEECT--TS--CEEEEEEEEETTTE-E-EEEE-CCHHHHHHHHHHCTTC
T ss_pred             --cCCCeEEeC-----cccCCCCchhheecc--CC--eEEEEEeCcccCCC-C-ceEE-ecHHHHHHHHHHHhhh
Confidence              124466652     478999999999963  23  49999999988864 2 4554 4789999999988653


No 215
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.44  E-value=1e-13  Score=126.43  Aligned_cols=93  Identities=29%  Similarity=0.457  Sum_probs=77.0

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCC---CCCCCccCCCCCeeeeEec-CCcEEEEEEEeEcCCCCC-
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD---GFSGACIGDSGGPLQCSLK-DGRWYLAGITSFGSGYCG-  249 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~---~~~~~C~gDsGgPl~~~~~-~~~~~l~GI~S~g~~~C~-  249 (436)
                      +..|+.+.+++++.+.|...+..  ...+.|||++...   ...++|.|||||||++... +++|+|+||+|||.+|+. 
T Consensus       157 ~~~l~~~~~~~~~~~~C~~~~~~--~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~  234 (259)
T 3rm2_H          157 PSVLQVVNLPIVERPVCKDSTRI--RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  234 (259)
T ss_dssp             CSBCEEEEEEBCCHHHHHHTCSS--CCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCT
T ss_pred             cccceEEEEEEeCHHHhhhhhcc--cCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCC
Confidence            56799999999999999998743  4567999997542   2358999999999999853 789999999999987543 


Q ss_pred             -CCcccccccceecCCccccC
Q psy16044        250 -VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       250 -~~~~y~~v~~~~~~~~~~~~  269 (436)
                       .+.+|++|..|..||.+.+.
T Consensus       235 ~~p~vyt~V~~~~~WI~~~i~  255 (259)
T 3rm2_H          235 GKYGFYTHVFRLKKWIQKVID  255 (259)
T ss_dssp             TCCEEEEETGGGHHHHHHHHH
T ss_pred             CCCeEEEEHHHhHHHHHHHHH
Confidence             45799999999999987653


No 216
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.44  E-value=5.2e-14  Score=135.57  Aligned_cols=92  Identities=26%  Similarity=0.534  Sum_probs=76.6

Q ss_pred             ccceeeeeeccchhhhhhhcCC-----CcCCcCCeEEeccCCCCCCCccCCCCCeeeeEe--cCCcEEEEEEEeEcCCCC
Q psy16044        176 SKLRQIRVPLHNISVCRDKYGD-----SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSL--KDGRWYLAGITSFGSGYC  248 (436)
Q Consensus       176 ~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~--~~~~~~l~GI~S~g~~~C  248 (436)
                      ..|+++.+++++.+.|+..+..     .+.+.+.||||+...+ .++|.|||||||++..  .+++|+|+||+|||.+ |
T Consensus       282 ~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~g-~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~-C  359 (394)
T 2b9l_A          282 NILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQG-KDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIG-C  359 (394)
T ss_dssp             CBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCBSS-CSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTC-C
T ss_pred             ccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEeeCCCC-CcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCC-C
Confidence            4699999999999999987642     2346779999986554 7999999999999963  3578999999999987 6


Q ss_pred             C---CCcccccccceecCCccccC
Q psy16044        249 G---VGIRYSHRQPRLINGKESIR  269 (436)
Q Consensus       249 ~---~~~~y~~v~~~~~~~~~~~~  269 (436)
                      +   .+.+|++|..|+.||.+.+.
T Consensus       360 ~~~~~PgVYT~V~~y~~WI~~~i~  383 (394)
T 2b9l_A          360 GDENVPGVYANVAHFRNWIDQEMQ  383 (394)
T ss_dssp             CBSSSCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCCCeEEEEHHHhHHHHHHHHH
Confidence            4   46899999999999987764


No 217
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=99.43  E-value=1.6e-12  Score=116.60  Aligned_cols=144  Identities=21%  Similarity=0.256  Sum_probs=87.3

Q ss_pred             CeeeEEEEecCC--EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCC
Q psy16044         55 PHWCGAVLIHPS--WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSR  132 (436)
Q Consensus        55 ~~~C~GtLIs~~--~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~  132 (436)
                      ...++|+||+++  ||||+|||+.+.       ..+.|.+..         ...+..+-+..++.     +|||||||+.
T Consensus        62 ~~~GSGfiI~~~~G~IlTnaHvv~~a-------~~i~V~~~d---------g~~~~a~vv~~d~~-----~DlAlLkv~~  120 (245)
T 3sti_A           62 EGLGSGVIINASKGYVLTNNHVINQA-------QKISIQLND---------GREFDAKLIGSDDQ-----SDIALLQIQN  120 (245)
T ss_dssp             --CCEEEEEETTTTEEEECGGGC-----------CEEEECTT---------SCEEEEEEEEEETT-----TTEEEEEESS
T ss_pred             cceEEEEEEeCCCCEEEEcHHHhCCC-------CEEEEEECC---------CCEEEEEEEEecCC-----CCEEEEEecc
Confidence            356999999998  999999999652       445666542         12344555556665     7999999986


Q ss_pred             CCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCC
Q psy16044        133 PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD  212 (436)
Q Consensus       133 ~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~  212 (436)
                      +..     +.++.|...  ..+..++.++++||......        ....-+++...+.. +.  ......++|+.   
T Consensus       121 ~~~-----~~~~~l~~s--~~~~~G~~v~aiG~P~g~~~--------~vt~G~vs~~~~~~-~~--~~~~~~~i~td---  179 (245)
T 3sti_A          121 PSK-----LTQIAIADS--DKLRVGDFAVAVGNPFGLGQ--------TATSGIVSALGRSG-LN--LEGLENFIQTD---  179 (245)
T ss_dssp             CCS-----CCCCCBCCG--GGCCTTBEEEEEECGGGSCC--------EEEEEEEEECSSCS-SC--CTTCSSCEEES---
T ss_pred             CCC-----CceeeecCc--CCCCCCCEEEEEECCCCCCC--------cEEeeEEeeecccc-cC--CCCccCEEEEc---
Confidence            533     567777653  33567899999998543211        11112222221210 11  11123456663   


Q ss_pred             CCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        213 GFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       213 ~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                        ...|.|+|||||+..  +|+  |+||+|+...
T Consensus       180 --a~i~~G~SGGPLvn~--~G~--vVGI~s~~~~  207 (245)
T 3sti_A          180 --ASINRGNSGGALLNL--NGE--LIGINTAILA  207 (245)
T ss_dssp             --SCCCTTTTTSEEECT--TSC--EEEEEECCC-
T ss_pred             --CCcCCCcchhHeecC--CCe--EEEEEEeEEC
Confidence              568999999999942  343  9999999754


No 218
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.39  E-value=1.3e-13  Score=118.52  Aligned_cols=121  Identities=19%  Similarity=0.169  Sum_probs=83.5

Q ss_pred             ccccceeecccccccCCCCeeee----ccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAV----CLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGD  356 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~pi----cl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~  356 (436)
                      .+|||||||+.++.+... |+++    +++.... .+..++.+.+.||...    .....++.+.+.+ +...+.. +..
T Consensus        53 ~~DiAlikl~~~~~~~~~-v~~i~~~~~~~~~~~-~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v-~~~~~~~-~~~  124 (181)
T 2sga_A           53 NNDYGIIRHSNPAAADGR-VYLYNGSYQDITTAG-NAFVGQAVQRSGSTTG----LRSGSVTGLNATV-NYGSSGI-VYG  124 (181)
T ss_dssp             BSCEEEEEESCGGGCCCE-EECSSSCEEECCEEC-CCCTTCEEEEEETTTE----EEEEEEEEEEEEE-ECGGGCE-EEE
T ss_pred             CCCEEEEEccCCCcccce-EEecCCcceeecccc-cCCCCCEEEEeecCCC----ccEEEEEEeEEEE-ECCCCCE-Eee
Confidence            579999999999888766 8988    7764322 4578999999998742    1234466666664 3333321 111


Q ss_pred             CccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHH
Q psy16044        357 SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIR  426 (436)
Q Consensus       357 ~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~  426 (436)
                        .+ ..++|+         |.|||||||++.   +  .++||+||+..|+....|++|++|..|++|+.
T Consensus       125 --~i-~~~~c~---------~~GDSGGPlv~~---~--~~vGI~s~g~~~~~~~~~~v~~~v~~~~~~l~  177 (181)
T 2sga_A          125 --MI-QTNVCA---------QPGDSGGSLFAG---S--TALGLTSGGSGNCRTGGTTFYQPVTEALSAYG  177 (181)
T ss_dssp             --EE-EESCCC---------CTTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHT
T ss_pred             --eE-eccccc---------CCCCCCCEEEEC---C--EEEEEEEeeCCCCcCCCceEEEEHHHHHHhcC
Confidence              01 113443         579999999974   2  59999999976444456999999999999985


No 219
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.36  E-value=1e-12  Score=118.49  Aligned_cols=118  Identities=17%  Similarity=0.169  Sum_probs=82.7

Q ss_pred             cccccceeecccccc---cCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCC
Q psy16044        280 SFLSAALLKLSRPTS---ARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGD  356 (436)
Q Consensus       280 ~~~diali~l~~~~~---~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~  356 (436)
                      ..+|||||+|+.|+.   ++.. ++|+||+...  ....++.++++|||.....    ..++...+.+++...       
T Consensus       117 ~~~DiAll~l~~~~~~~~~~~~-v~~i~L~~~~--~~~~g~~~~v~Gwg~~~~~----~~l~~~~~~~~~~~~-------  182 (242)
T 1agj_A          117 AGVDLALIRLKPDQNGVSLGDK-ISPAKIGTSN--DLKDGDKLELIGYPFDHKV----NQMHRSEIELTTLSR-------  182 (242)
T ss_dssp             TTSCCEEEEECCCTTSCCHHHH-SCCCEECCST--TCCTTCEEEEEECCTTTST----TCCEEEEEEECCGGG-------
T ss_pred             CCCcEEEEEEcCCCcccccccc-ccceecCccc--cCCCCCEEEEEeCCCCCCC----ccceeeeeeEecCCc-------
Confidence            579999999999964   4444 8999998543  3467899999999975432    246666666554211       


Q ss_pred             CccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCC-CCCCCeEEEeCcccHHHHHH
Q psy16044        357 SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCA-KSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       357 ~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~-~~~~p~v~t~V~~~~~WI~~  427 (436)
                             .++..     ..+|.|||||||++.  ++  .|+||+||+.+|. ......+.+.|...+.|+.+
T Consensus       183 -------~~~~~-----~~~c~GdSGGPl~~~--~g--~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~  238 (242)
T 1agj_A          183 -------GLRYY-----GFTVPGNSGSGIFNS--NG--ELVGIHSSKVSHLDREHQINYGVGIGNYVKRIIN  238 (242)
T ss_dssp             -------SEEEE-----CCCCGGGTTCEEECT--TS--EEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHH
T ss_pred             -------eEEEe-----CCcCCCCCchHhccc--CC--EEEEEEeccccccCcCCCceeeEEehHHHHHHHH
Confidence                   12211     268999999999963  33  5999999999987 33346778999866665543


No 220
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.31  E-value=8.7e-13  Score=136.85  Aligned_cols=93  Identities=27%  Similarity=0.456  Sum_probs=78.8

Q ss_pred             cccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCC--CCCc
Q psy16044        175 VSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYC--GVGI  252 (436)
Q Consensus       175 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C--~~~~  252 (436)
                      +..|+++.+.+++.+.|+........+.+.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+  +.+.
T Consensus       694 s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~-~~~~~LvGIvS~G~gC~~~~~Pg  772 (791)
T 4dur_A          694 AGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFE-KDKYILQGVTSWGLGCARPNKPG  772 (791)
T ss_dssp             TTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEE-TTEEEEEEECCTTTCCBBTTBCE
T ss_pred             CCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCcccceEEEe-CCeEEEEEEEEeCCCCCCCCCCe
Confidence            45799999999999999876433345677999999887778999999999999974 78999999999998854  2468


Q ss_pred             ccccccceecCCcccc
Q psy16044        253 RYSHRQPRLINGKESI  268 (436)
Q Consensus       253 ~y~~v~~~~~~~~~~~  268 (436)
                      +|++|..|+.||.+++
T Consensus       773 VYTrVs~y~dWI~~~i  788 (791)
T 4dur_A          773 VYVRVSRFVTWIEGVM  788 (791)
T ss_dssp             EEEEGGGTHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHH
Confidence            9999999999998765


No 221
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.26  E-value=1.7e-11  Score=116.01  Aligned_cols=72  Identities=24%  Similarity=0.484  Sum_probs=62.7

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGD  356 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~  356 (436)
                      .||||||||++|+.++.. |+|||||..+.  ...+..++++|||.+.. ...+..|+++.+++++.++|++.+..
T Consensus       185 ~nDIALlkL~~~v~~~~~-v~PicLp~~~~--~~~g~~~~v~GWG~~~~-~~~s~~L~~~~v~iv~~~~C~~~~~~  256 (347)
T 4f4o_C          185 TVDIGLIKLKQKVPVNER-VMPICLPSKDY--VNVGLVGYVSGWGRNAN-LNFTEHLKYVMLPVADQEKCVQYYEG  256 (347)
T ss_dssp             TCCCEEEEESSCCCCSSS-CCCCBCCSSCC--CCTTCEEEEEECSBCTT-SSBCSSCEEEEEEEECHHHHHHHHSS
T ss_pred             CCCEEEEEECCCccCCCc-eeeeecCcccc--CCCCcEEEEeccccCCC-CCCCccceEEEEEEeCHHHHHHHhcc
Confidence            489999999999999998 99999997654  45789999999998754 34578899999999999999998765


No 222
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.25  E-value=2.5e-12  Score=129.79  Aligned_cols=106  Identities=32%  Similarity=0.569  Sum_probs=64.8

Q ss_pred             EEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCccCCCCCeeeeEecCCcEEEEE
Q psy16044        160 CVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAG  239 (436)
Q Consensus       160 ~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~G  239 (436)
                      ++++|||.+... ..+..|+.+.+++++.  |+..+...+ ..+.||||+...+..++|+|||||||++...+++|+|+|
T Consensus       449 ~~v~GWG~t~~~-~~~~~L~~~~v~i~~~--C~~~~~~~~-~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvG  524 (565)
T 2xrc_A          449 CIVSGWGREKDN-ERVFSLQWGEVKLISN--CSKFYGNRF-YEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWG  524 (565)
T ss_dssp             EEEEC--------------CEEEEEECSC--THHHHTTSC-CTTTEEEEEEC----------CCCEEEEECTTCCEEEEE
T ss_pred             EEEEeCccCCCC-CccceeeEEeeeehHH--hHHhhccCc-CCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEE
Confidence            689999988753 3567799999999874  998876532 234599999877778999999999999986678999999


Q ss_pred             EEeEcCCCCC---CCcccccccceecCCccccCC
Q psy16044        240 ITSFGSGYCG---VGIRYSHRQPRLINGKESIRG  270 (436)
Q Consensus       240 I~S~g~~~C~---~~~~y~~v~~~~~~~~~~~~~  270 (436)
                      |+|||.+ |+   .+.+|++|..|+.||.+.+..
T Consensus       525 IvS~G~~-C~~~~~PgVYTrVs~y~~WI~~~i~~  557 (565)
T 2xrc_A          525 VVSWGEN-CGKPEFPGVYTKVANYFDWISYHVGR  557 (565)
T ss_dssp             EECC-------CCCCEEEEEGGGGHHHHHHHC--
T ss_pred             EEeeCCC-CCCCCCCEEEEEHHHHHHHHHHHhcc
Confidence            9999987 54   467999999999999887753


No 223
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=99.22  E-value=9.2e-11  Score=110.73  Aligned_cols=145  Identities=21%  Similarity=0.247  Sum_probs=91.1

Q ss_pred             CeeeEEEEecCC--EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCC
Q psy16044         55 PHWCGAVLIHPS--WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSR  132 (436)
Q Consensus        55 ~~~C~GtLIs~~--~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~  132 (436)
                      ...++|.||+++  ||||+|||+.+.       ..+.|.+..         ...+..+-+..||.     +||||||++.
T Consensus        62 ~~~GSGfiI~~~~G~IlTnaHVv~~~-------~~i~V~~~d---------g~~~~a~vv~~d~~-----~DlAlLkv~~  120 (345)
T 3stj_A           62 EGLGSGVIINASKGYVLTNNHVINQA-------QKISIQLND---------GREFDAKLIGSDDQ-----SDIALLQIQN  120 (345)
T ss_dssp             EEEEEEEEEETTTTEEEECHHHHTTE-------EEEEEECTT---------SCEEEEEEEEEETT-----TTEEEEEESS
T ss_pred             ceeEEEEEEECCCCEEEEChHHhCCC-------CEEEEEeCC---------CcEEEEEEEEEcCC-----CCEEEEEEcc
Confidence            357999999997  999999998652       445565532         13455666677776     6999999976


Q ss_pred             CCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCC
Q psy16044        133 PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD  212 (436)
Q Consensus       133 ~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~  212 (436)
                      +..     +.++.|...  ..+..+..++++||......        ....-+++...+.. ..  ......++++.   
T Consensus       121 ~~~-----~~~~~l~~s--~~~~~G~~V~aiG~p~g~~~--------~vt~G~Vs~~~~~~-~~--~~~~~~~iq~d---  179 (345)
T 3stj_A          121 PSK-----LTQIAIADS--DKLRVGDFAVAVGNPFGLGQ--------TATSGIVSALGRSG-LN--LEGLENFIQTD---  179 (345)
T ss_dssp             CCS-----CCCCCBCCG--GGCCTTBEEEEEECGGGCSC--------EEEEEEEEEEEECC-SS--SSSSCCEEEEC---
T ss_pred             cCC-----CceEeecCc--ccCCCCCEEEEEECCCCCCC--------cEEeeEEeeecccc-cC--CCCccCEEEEe---
Confidence            533     456666653  33567899999999643211        11111222111110 00  01112455553   


Q ss_pred             CCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCC
Q psy16044        213 GFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGY  247 (436)
Q Consensus       213 ~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~  247 (436)
                        ...|.|+|||||+..  +|+  ++||.++....
T Consensus       180 --a~i~~GnSGGPLvn~--~G~--vVGI~s~~~~~  208 (345)
T 3stj_A          180 --ASINRGNSGGALLNL--NGE--LIGINTAILAP  208 (345)
T ss_dssp             --SCCCTTCTTCEEECT--TSC--EEEEEEEEECT
T ss_pred             --cccCCCcCccceeCC--CCE--EEEEEeccccC
Confidence              568999999999953  444  99999986543


No 224
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.22  E-value=5.3e-11  Score=102.34  Aligned_cols=156  Identities=19%  Similarity=0.172  Sum_probs=89.4

Q ss_pred             CeeeE-EEEecC---CEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEe
Q psy16044         55 PHWCG-AVLIHP---SWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKL  130 (436)
Q Consensus        55 ~~~C~-GtLIs~---~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L  130 (436)
                      ...|+ |.++++   .+||||+||+...       .  .+.++...       ...-.+.. ..+|     .+|+|||||
T Consensus        11 ~~~CT~Gfiv~~~g~~~ilT~~Hv~~~~-------~--~v~~~~~~-------~~~g~~~~-~~~~-----~~DiAlikl   68 (187)
T 1hpg_A           11 GSRCSAAFNVTKGGARYFVTAGHCTNIS-------A--NWSASSGG-------SVVGVREG-TSFP-----TNDYGIVRY   68 (187)
T ss_dssp             TEEEECCEEEEETTEEEEEECHHHHTTC-------S--EEESSTTC-------CEEEEEEE-EECS-----BSCEEEEEE
T ss_pred             CCcCcceEEEEECCeeEEEECcccCCCC-------C--eEEeCCCc-------eeEEEEeC-ccCC-----CCCEEEEEe
Confidence            46799 888887   4999999998652       1  22222100       00000110 1113     379999999


Q ss_pred             CCCCCCCCCceee-----eeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCe
Q psy16044        131 SRPTSARDKGVRA-----VCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGH  205 (436)
Q Consensus       131 ~~~~~~~~~~v~p-----i~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~  205 (436)
                      +.++. ....+..     +.+..  ...+..++.+..+||....    ....+......+.        +...  ....+
T Consensus        69 ~~~~~-~~~~v~~~~g~~~~i~~--~~~~~~G~~v~~~G~~~g~----t~G~v~~~~~~v~--------~~~~--~~~~~  131 (187)
T 1hpg_A           69 TDGSS-PAGTVDLYNGSTQDISS--AANAVVGQAIKKSGSTTKV----TSGTVTAVNVTVN--------YGDG--PVYNM  131 (187)
T ss_dssp             CSSCC-CCSEEECSSSCEEECCE--ECCCCTTCEEEEEETTTEE----EEEEEEEEEEEEE--------ETTE--EEEEE
T ss_pred             CCCCC-cCceEEecCCceeeecc--ccCCCCCCEEEEEEcCCCE----eEEEEEEeEEEEE--------eCCC--eEeee
Confidence            98765 3332221     22322  2345678899999987421    1112333332221        1100  12368


Q ss_pred             EEeccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC--Ccccccccc
Q psy16044        206 LCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV--GIRYSHRQP  259 (436)
Q Consensus       206 ~Ca~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~--~~~y~~v~~  259 (436)
                      +|+.     ...|.|||||||++.   +  .++||+|++...|..  ...|+++..
T Consensus       132 i~t~-----~~~~~GdSGgpl~~~---~--~~vGi~s~~~~~~~~~~~~~~~~i~~  177 (187)
T 1hpg_A          132 VRTT-----ACSAGGDSGGAHFAG---S--VALGIHSGSSGCSGTAGSAIHQPVTE  177 (187)
T ss_dssp             EEEC-----CCCCTTCTTCEEEET---T--EEEEEEEEESCCBTTBCCCEEEEHHH
T ss_pred             EEec-----cccCCCCCCCeEEEC---C--EEEEEEEeeCCCCCCCCceEEEEHHH
Confidence            8874     567899999999964   2  699999999876753  345665543


No 225
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.10  E-value=2.2e-10  Score=100.65  Aligned_cols=115  Identities=14%  Similarity=0.098  Sum_probs=74.9

Q ss_pred             ccccceeeccc--------ccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccccc
Q psy16044        281 FLSAALLKLSR--------PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRD  352 (436)
Q Consensus       281 ~~diali~l~~--------~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~  352 (436)
                      .+|||||+|+.        |+.++.. ++|+||+.    ....++.+++.||+.....   ...+ .+...+++..    
T Consensus        76 ~~DiAll~l~~~~~~~~~~~~~~~~~-v~~i~l~~----~~~~g~~v~v~G~p~~~~~---~~~l-~~~~g~v~~~----  142 (210)
T 2as9_A           76 DEDISVMNIEEQAVERGPKGFNFNEN-VQAFNFAK----DAKVDDKIKVIGYPLPAQN---SFKQ-FESTGTIKRI----  142 (210)
T ss_dssp             SSSCEEEEECSEEEEEETTEEEGGGS-CCCCCBCS----CCCTTCEEEEEECSSTTTT---TSCC-EEEEEEEEEE----
T ss_pred             CCcEEEEEecCccccccccccccccc-cceeecCC----CCCCCCEEEEEeCCCCCCC---Ccce-EEeeeEEccc----
Confidence            58999999998        5777776 99999973    3467899999999863321   1122 4444454432    


Q ss_pred             ccCCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCc-ccHHHHH
Q psy16044        353 KYGDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLS-FYLPWIR  426 (436)
Q Consensus       353 ~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~-~~~~WI~  426 (436)
                              ...++|..     ...|.|||||||++.  +|+  |+||+||+........ ..|+.+. ..+.|++
T Consensus       143 --------~~~~i~~~-----~~~~~GdSGGPlv~~--~g~--lvGI~s~g~~~~~~~~-~~~~~~~~~i~~f~~  199 (210)
T 2as9_A          143 --------KDNILNFD-----AYIEPGNSGSPVLNS--NNE--VIGVVYGGIGKIGSEY-NGAVYFTPQIKDFIQ  199 (210)
T ss_dssp             --------ETTEEEEE-----CCCCTTCTTCEEECT--TSC--EEEEECCSCCCTTCSS-EEEEECCHHHHHHHH
T ss_pred             --------cCCeEEEc-----CccCCCCccCcEECC--CCe--EEEEEecccccCCccc-cccEEEcHHHHHHHH
Confidence                    13567763     368999999999973  343  9999999975322122 2355553 2444443


No 226
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.09  E-value=6.5e-11  Score=101.59  Aligned_cols=149  Identities=22%  Similarity=0.264  Sum_probs=79.6

Q ss_pred             CeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCC
Q psy16044         55 PHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPT  134 (436)
Q Consensus        55 ~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~  134 (436)
                      ...|+.-.+-.++||||+||+...       .  .|.+.  +       ...       .+..|  ..+|||||||+.+.
T Consensus        14 ~~~CT~Gf~~~~~ilTa~Hc~~~~-------~--~v~~~--d-------g~v-------~~~~~--~~~DiAlikl~~~~   66 (189)
T 2ea3_A           14 RSRCSIGFAVNGGFITAGHCGRTG-------A--TTANP--T-------GTF-------AGSSF--PGNDYAFVRTGAGV   66 (189)
T ss_dssp             EEEEECCEEETTEEEECGGGCCTT-------C--EEETT--T-------EEE-------EEEEC--SBSCEEEEEECTTC
T ss_pred             CCCCccCEEccCeEEEchhcCCCC-------C--EEEeC--C-------cEE-------EeeCC--CCCCEEEEEECCCC
Confidence            357995555555999999998542       1  12221  0       111       11111  23799999999886


Q ss_pred             CCCCCcee-----eeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCC--cCCcCCeEE
Q psy16044        135 SARDKGVR-----AVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDS--VELHGGHLC  207 (436)
Q Consensus       135 ~~~~~~v~-----pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~--~~~~~~~~C  207 (436)
                      . ....++     ++.|+..  ..+..++.+.  .||.+.       .+....+..++...+   +...  ......++|
T Consensus        67 ~-~~~~v~~~~g~~v~l~~s--~~~~vG~~v~--~~G~~t-------G~t~G~Vs~~~~~v~---~~~~~~~~~~~~~~~  131 (189)
T 2ea3_A           67 N-LLAQVNNYSGGRVQVAGH--TAAPVGSAVC--RSGSTT-------GWHCGTITALNSSVT---YPEGTVRGLIRTTVC  131 (189)
T ss_dssp             E-EEEEEECSSSCEEECCBC--CCCCTTCEEE--EEETTT-------EEEEEEEEEEEEEEE---ETTEEEEEEEEESCC
T ss_pred             c-cccceEecCCceeecCCC--cCCCCCCEEE--EEEeCC-------ccEEEEEEecceEEE---eCCccCcceEEeeee
Confidence            5 333444     5666652  2344566544  444332       122222332222211   1000  001113344


Q ss_pred             eccCCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCC--cccccccc
Q psy16044        208 GGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVG--IRYSHRQP  259 (436)
Q Consensus       208 a~~~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~--~~y~~v~~  259 (436)
                      +.         +|||||||++.   +  .++||+||+.++|+..  ..|+++..
T Consensus       132 ~~---------~GDSGgpl~~~---~--~~vGi~s~~~~~c~~~~~~~~~pi~~  171 (189)
T 2ea3_A          132 AE---------PGDSGGSLLAG---N--QAQGVTSGGSGNCRTGGTTFFQPVNP  171 (189)
T ss_dssp             CC---------TTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHH
T ss_pred             cc---------CCCccCeEEEC---C--EEEEEEeecCCCCCCCCcEEEEEHHH
Confidence            42         79999999963   3  5999999998767643  45555544


No 227
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.00  E-value=3.6e-09  Score=103.26  Aligned_cols=145  Identities=20%  Similarity=0.223  Sum_probs=91.1

Q ss_pred             CeeeEEEEecCC--EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCC
Q psy16044         55 PHWCGAVLIHPS--WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSR  132 (436)
Q Consensus        55 ~~~C~GtLIs~~--~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~  132 (436)
                      ...++|.+|+++  ||||+|||+.+.       ..+.|.+..         ...+..+-+..||.     +||||||++.
T Consensus        62 ~~~GSGfii~~~~G~IlTn~Hvv~~a-------~~i~V~~~d---------g~~~~a~vv~~d~~-----~DlAllkv~~  120 (436)
T 4a8c_A           62 EGLGSGVIINASKGYVLTNNHVINQA-------QKISIQLND---------GREFDAKLIGSDDQ-----SDIALLQIQN  120 (436)
T ss_pred             ceEEEEEEEECCCCEEEECHHHhCCC-------CEEEEEeCC---------CCEEEEEEEEEcCC-----CCEEEEEecC
Confidence            467999999997  999999999652       455666532         13455666677776     6999999976


Q ss_pred             CCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCC
Q psy16044        133 PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD  212 (436)
Q Consensus       133 ~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~  212 (436)
                      +..     +.++.|.+.  ..+..+..+.++||.....     .....   -+++...+.. +..  .....++.+.   
T Consensus       121 ~~~-----l~~~~l~~s--~~~~~G~~v~aiG~P~g~~-----~~vt~---G~vs~~~r~~-~~~--~~~~~~iq~d---  179 (436)
T 4a8c_A          121 PSK-----LTQIAIADS--DKLRVGDFAVAVGNPFGLG-----QTATS---GIVSALGRSG-LNL--EGLENFIQTD---  179 (436)
T ss_pred             CCC-----CceEeccCc--ccCCCCCEEEEEEcCCCCC-----ccEEE---EEEeeecccc-cCC--CCccCEEEEc---
Confidence            532     567777753  3456789999999854321     11111   1222111110 000  0011344442   


Q ss_pred             CCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCC
Q psy16044        213 GFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGY  247 (436)
Q Consensus       213 ~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~  247 (436)
                        ...|.|+|||||+..  +|  .++||.++....
T Consensus       180 --a~i~~GnSGGPl~n~--~G--~vvGI~~~~~~~  208 (436)
T 4a8c_A          180 --ASINRGNAGGALLNL--NG--ELIGINTAILAP  208 (436)
T ss_pred             --CccCCCCCcCcccCC--CC--EEEEEEeeeccC
Confidence              567899999999953  34  499999987553


No 228
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.97  E-value=4.9e-10  Score=90.54  Aligned_cols=56  Identities=36%  Similarity=0.490  Sum_probs=49.4

Q ss_pred             CCCcccccccccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCC
Q psy16044        271 AWPWQNLITSFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVK  328 (436)
Q Consensus       271 ~~p~~~~~~~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~  328 (436)
                      .||.|+..+..||||||||++|+.++.. |+|||||.... ....++.|+++|||.+.
T Consensus        75 ~hp~y~~~~~~~DIALl~L~~~~~~~~~-v~picLp~~~~-~~~~g~~~~v~GWG~t~  130 (131)
T 1yph_C           75 KNSKYNSLTINNDITLLKLSTAASFSQT-VSAVCLPSASD-DFAAGTTCVTTGWGLTR  130 (131)
T ss_dssp             ECTTCCTTTCCSCCEEEEESSCCCCBTT-BCCCBCCCTTC-CCCTTCEEEEEESCCSC
T ss_pred             eCCCCCCCCCCCCEEEEEECCcccCCCc-CcceECCCccc-CCCCCCEEEEEcCCccC
Confidence            4899998889999999999999999988 99999997665 35678999999999763


No 229
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.86  E-value=9.4e-09  Score=100.54  Aligned_cols=147  Identities=24%  Similarity=0.258  Sum_probs=86.4

Q ss_pred             CeeeEEEEecC--CEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCC
Q psy16044         55 PHWCGAVLIHP--SWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSR  132 (436)
Q Consensus        55 ~~~C~GtLIs~--~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~  132 (436)
                      ...++|.+|++  .||||+|||+.+.       ..+.|.+..         ...+..+-+..||.     .||||||++.
T Consensus        76 ~~~GSGfiI~~~~G~IlTn~HVv~~a-------~~i~V~~~d---------g~~~~a~vv~~d~~-----~DlAlLkv~~  134 (451)
T 3pv2_A           76 ESIGSGVIIDPNNGVIITNDHVIRNA-------SLITVTLQD---------GRRLKARLIGGDSE-----TDLAVLKIDA  134 (451)
T ss_dssp             EEEEEEEEEETTTTEEEECHHHHTTE-------EEEEEECTT---------SCEEECEEEEEETT-----TTEEEEECCC
T ss_pred             ceeEEEEEEECCCCEEEEChHHhCCC-------CEEEEEEcC---------CCEEEEEEEecCcC-----CcEEEEEEcC
Confidence            45799999997  4999999999652       445666532         13455666677776     6999999964


Q ss_pred             CCCCCCCceeeeeecCCCCCCCCCCCcEEEEe--cCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEecc
Q psy16044        133 PTSARDKGVRAVCLTDADKRPVNPKQQCVATG--WGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQ  210 (436)
Q Consensus       133 ~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~G--wG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~  210 (436)
                            ..+.++.|.+.  ..+..++.++++|  ||.....  .........+.-+.....    ..  .....++++. 
T Consensus       135 ------~~l~~~~l~~s--~~~~~G~~V~aiG~P~G~~~~~--~~~~vt~Givs~~~r~~~----~~--~~~~~~iqtd-  197 (451)
T 3pv2_A          135 ------KNLKSLVIGDS--DKLEVGDFVVAIGNPFGLNSFG--NSQSATFGIVSALKRSDL----NI--EGVENFIQTD-  197 (451)
T ss_dssp             ------SSCCCCCBCCG--GGCCTTCEEEEEECCCCC-------CCEEEEEEEEEEC----------------CCEEES-
T ss_pred             ------cCCceeEecCc--ccCCCCCEEEEEECCCCccccc--cCCceeEEEEeecccccc----CC--CCcceEEEEe-
Confidence                  12456666542  3456789999999  5543211  011122222222211100    00  0112445553 


Q ss_pred             CCCCCCCccCCCCCeeeeEecCCcEEEEEEEeEcCCC
Q psy16044        211 LDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGY  247 (436)
Q Consensus       211 ~~~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~~  247 (436)
                          ...+.|+|||||+..  +|+  |+||.++....
T Consensus       198 ----a~i~~GnSGGPl~n~--~G~--VIGI~t~~~~~  226 (451)
T 3pv2_A          198 ----AAINPGNSGGALVNA--KGE--LIGINTAILSP  226 (451)
T ss_dssp             ----SCCCGGGTTSEEEET--TCC--EEEEEECCC--
T ss_pred             ----cccCCCCCcCcccCC--CCe--EEEEEeEeecC
Confidence                567899999999953  444  99999987543


No 230
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=98.85  E-value=2.8e-09  Score=91.08  Aligned_cols=34  Identities=38%  Similarity=0.588  Sum_probs=25.2

Q ss_pred             cCCCCCeeeeEecCCcEEEEEEEeEcCCCCCCC--cccccc
Q psy16044        219 IGDSGGPLQCSLKDGRWYLAGITSFGSGYCGVG--IRYSHR  257 (436)
Q Consensus       219 ~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~~--~~y~~v  257 (436)
                      +|||||||++.   +  .++||+||+.+.|...  ..|+++
T Consensus       137 ~GDSGgpl~~~---~--~~vGi~s~g~~~c~~~~~~~~~pi  172 (186)
T 2pfe_A          137 GGDSGGPWLTG---S--QAQGVTSGGTGDCRSGGITFFQPI  172 (186)
T ss_dssp             TTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEH
T ss_pred             CCCccCeEEEC---C--EEEEEEeecCCCCCCCCcEEEEEH
Confidence            69999999963   2  5999999998767543  344444


No 231
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=98.78  E-value=6.5e-09  Score=93.59  Aligned_cols=93  Identities=24%  Similarity=0.268  Sum_probs=62.0

Q ss_pred             cccccceeeccccc---ccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCC
Q psy16044        280 SFLSAALLKLSRPT---SARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGD  356 (436)
Q Consensus       280 ~~~diali~l~~~~---~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~  356 (436)
                      ..+|||||+|+.++   .++.. ++|+||+....  ...++.+++.||+.....   + .+....+.+.+      ..  
T Consensus       111 ~~~DiALLkl~~~~~~~~~~~~-v~~i~L~~~~~--~~~g~~v~v~G~p~g~~~---~-~~~~~~~~~~~------~~--  175 (246)
T 1qtf_A          111 QGLDLAIIKLKPNEKGESAGDL-IQPANIPDHID--IAKGDKYSLLGYPYNYSA---Y-SLYQSQIEMFN------DS--  175 (246)
T ss_dssp             TTSCCEEEEECCCTTSCCHHHH-SCCCCCCSSCC--CCTTCEEEEEECCTTTST---T-CCEEEEEEESS------SS--
T ss_pred             CCCCEEEEEEeCCccccccccc-eeeeecCCccc--cCCCCEEEEEECCCCCCC---c-eeEeeeeeecC------cE--
Confidence            47899999999997   44444 89999986532  467899999999753211   1 12222333332      00  


Q ss_pred             CccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC
Q psy16044        357 SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  405 (436)
Q Consensus       357 ~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~  405 (436)
                             .      . ....|.|||||||++.  ++  .|+||+||+..
T Consensus       176 -------~------~-~~~~~~GdSGGPlv~~--~g--~lvGI~s~g~~  206 (246)
T 1qtf_A          176 -------Q------Y-FGYTEVGNSGSGIFNL--KG--ELIGIHSGKGG  206 (246)
T ss_dssp             -------B------E-ESCCCGGGTTCEEECT--TC--CEEEEEEEEET
T ss_pred             -------E------E-eCCCCCCCchhheECC--CC--EEEEEEecccc
Confidence                   0      0 1257999999999963  33  39999999864


No 232
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=98.74  E-value=1.8e-08  Score=86.33  Aligned_cols=27  Identities=44%  Similarity=0.674  Sum_probs=22.0

Q ss_pred             cCCCCCeeeeEecCCcEEEEEEEeEcCCCCCC
Q psy16044        219 IGDSGGPLQCSLKDGRWYLAGITSFGSGYCGV  250 (436)
Q Consensus       219 ~gDsGgPl~~~~~~~~~~l~GI~S~g~~~C~~  250 (436)
                      +|||||||++.   +  .++||+|++.+.|+.
T Consensus       140 ~GDSGgpl~~~---~--~~vGi~s~~~~~~~~  166 (188)
T 2oua_A          140 PGDSGGSFISG---T--QAQGVTSGGSGNCRT  166 (188)
T ss_dssp             TTCTTCEEEET---T--EEEEEEEEEEEETTT
T ss_pred             CCCccceEEEC---C--EEEEEEeccCCCCCC
Confidence            79999999953   3  599999999766754


No 233
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=98.70  E-value=2.3e-08  Score=85.72  Aligned_cols=117  Identities=16%  Similarity=0.120  Sum_probs=74.8

Q ss_pred             ccccceeecccccccCCCCeee-----eccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRA-----VCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYG  355 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~p-----icl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~  355 (436)
                      .+|+||||++.+...... +..     +.+..  ...+..++.+...||..-    .....+..+...+.        +.
T Consensus        60 ~~DiAlikl~~~~~~~~~-v~~~~g~~~~i~~--~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~--------~~  124 (187)
T 1hpg_A           60 TNDYGIVRYTDGSSPAGT-VDLYNGSTQDISS--AANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVN--------YG  124 (187)
T ss_dssp             BSCEEEEEECSSCCCCSE-EECSSSCEEECCE--ECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE--------ET
T ss_pred             CCCEEEEEeCCCCCcCce-EEecCCceeeecc--ccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEE--------eC
Confidence            479999999986554322 221     33322  224578999999998731    11223333333321        11


Q ss_pred             CCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccHHHH
Q psy16044        356 DSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYLPWI  425 (436)
Q Consensus       356 ~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~~WI  425 (436)
                      .  ....+++|+.     ...|.|||||||++.   +  .++||.||+.. |.. ..|.+|++|..+++.+
T Consensus       125 ~--~~~~~~i~t~-----~~~~~GdSGgpl~~~---~--~~vGi~s~~~~~~~~-~~~~~~~~i~~~~~~l  182 (187)
T 1hpg_A          125 D--GPVYNMVRTT-----ACSAGGDSGGAHFAG---S--VALGIHSGSSGCSGT-AGSAIHQPVTEALSAY  182 (187)
T ss_dssp             T--EEEEEEEEEC-----CCCCTTCTTCEEEET---T--EEEEEEEEESCCBTT-BCCCEEEEHHHHHHHH
T ss_pred             C--CeEeeeEEec-----cccCCCCCCCeEEEC---C--EEEEEEEeeCCCCCC-CCceEEEEHHHHHHHc
Confidence            1  1134578874     257899999999974   2  59999999975 654 5699999999887765


No 234
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=98.68  E-value=5e-09  Score=89.81  Aligned_cols=117  Identities=21%  Similarity=0.223  Sum_probs=71.8

Q ss_pred             ccccceeecccccccCCCCee-----eeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVR-----AVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYG  355 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~-----picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~  355 (436)
                      .+|+|||||+.+...... ++     +++|+...  .+..++.+.  .||++.       -++...+..++...+... .
T Consensus        54 ~~DiAlikl~~~~~~~~~-v~~~~g~~v~l~~s~--~~~vG~~v~--~~G~~t-------G~t~G~Vs~~~~~v~~~~-~  120 (189)
T 2ea3_A           54 GNDYAFVRTGAGVNLLAQ-VNNYSGGRVQVAGHT--AAPVGSAVC--RSGSTT-------GWHCGTITALNSSVTYPE-G  120 (189)
T ss_dssp             BSCEEEEEECTTCEEEEE-EECSSSCEEECCBCC--CCCTTCEEE--EEETTT-------EEEEEEEEEEEEEEEETT-E
T ss_pred             CCCEEEEEECCCCccccc-eEecCCceeecCCCc--CCCCCCEEE--EEEeCC-------ccEEEEEEecceEEEeCC-c
Confidence            579999999988654443 54     66776533  245666554  455321       133344444433322100 0


Q ss_pred             CCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccHHHH
Q psy16044        356 DSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYLPWI  425 (436)
Q Consensus       356 ~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~~WI  425 (436)
                      ....+...++|+.         .|||||||++.   +  .++||.||+.. |.. ..+.+|++|..+++|.
T Consensus       121 ~~~~~~~~~~~~~---------~GDSGgpl~~~---~--~~vGi~s~~~~~c~~-~~~~~~~pi~~~l~~~  176 (189)
T 2ea3_A          121 TVRGLIRTTVCAE---------PGDSGGSLLAG---N--QAQGVTSGGSGNCRT-GGTTFFQPVNPILQAY  176 (189)
T ss_dssp             EEEEEEEESCCCC---------TTCTTCEEEET---T--EEEEEEEEEEEETTT-EEEEEEEEHHHHHHHH
T ss_pred             cCcceEEeeeecc---------CCCccCeEEEC---C--EEEEEEeecCCCCCC-CCcEEEEEHHHHHHHC
Confidence            0001233456653         69999999963   3  49999999976 544 4589999999999887


No 235
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.64  E-value=2.1e-07  Score=90.89  Aligned_cols=143  Identities=21%  Similarity=0.238  Sum_probs=84.8

Q ss_pred             CeeeEEEEecCC--EEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCC
Q psy16044         55 PHWCGAVLIHPS--WVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSR  132 (436)
Q Consensus        55 ~~~C~GtLIs~~--~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~  132 (436)
                      ...|+|.+|+++  ||||++||+.+.       ..+.|.+...         ..+..+-+..++.     .||||||++.
T Consensus        85 ~~~GSG~ii~~~~g~IlTn~HVv~~a-------~~i~V~~~dg---------~~~~a~vv~~d~~-----~DlAvlkv~~  143 (448)
T 1ky9_A           85 MALGSGVIIDADKGYVVTNNHVVDNA-------TVIKVQLSDG---------RKFDAKMVGKDPR-----SDIALIQIQN  143 (448)
T ss_dssp             EEEEEEEEEETTTTEEEEEHHHHTTE-------EEEEEEETTS---------CEEEEEEEEEETT-----TTEEEEEESS
T ss_pred             ccEEEEEEEECCCCEEEEChHHhCCC-------CEEEEEECCC---------CEEEEEEEEEcCC-----CCEEEEEecC
Confidence            467999999985  999999999652       4566666421         2233333344444     7999999986


Q ss_pred             CCCCCCCceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCC
Q psy16044        133 PTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLD  212 (436)
Q Consensus       133 ~~~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~  212 (436)
                      +-.     +.++.|.+.  ..+..++.+.++||.....     .......+.-+....    ..  ......++++.   
T Consensus       144 ~~~-----~~~~~l~~s--~~~~~G~~V~aiG~P~g~~-----~tvt~Givs~~~r~~----~~--~~~~~~~iqtd---  202 (448)
T 1ky9_A          144 PKN-----LTAIKMADS--DALRVGDYTVAIGNPFGLG-----ETVTSGIVSALGRSG----LN--AENYENFIQTD---  202 (448)
T ss_dssp             CCS-----CCCCCBCCG--GGCCTTCEEEEEECTTSSS-----CEEEEEEEEEESSCC-----------CCCCEEES---
T ss_pred             CCC-----CceEEeccc--ccCCCCCEEEEEECCCCCC-----CeEEeEEEeeccccc----cC--CCCccCEEEEc---
Confidence            422     455666542  3456789999999753221     111111121111110    00  00112445553   


Q ss_pred             CCCCCccCCCCCeeeeEecCCcEEEEEEEeEcC
Q psy16044        213 GFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS  245 (436)
Q Consensus       213 ~~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~  245 (436)
                        ...+.|+|||||+..  +|+  ++||.+...
T Consensus       203 --a~i~~GnSGGpl~n~--~G~--vvGI~~~~~  229 (448)
T 1ky9_A          203 --AAINRGNAGGALVNL--NGE--LIGINTAIL  229 (448)
T ss_dssp             --CCCTTSCCCSEEECT--TSC--EEEEEECSS
T ss_pred             --CCCCCCCCCCeeECC--CCE--EEEEEEEee
Confidence              567899999999953  453  999999764


No 236
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.56  E-value=3.2e-07  Score=86.83  Aligned_cols=128  Identities=17%  Similarity=0.122  Sum_probs=83.7

Q ss_pred             cccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCcc
Q psy16044        280 SFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVE  359 (436)
Q Consensus       280 ~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~  359 (436)
                      ..+||||||++.|..   . ++|++|+....  +..++.+++.||+....     ..+....+..+....|......   
T Consensus        98 ~~~DlAlLkl~~~~~---~-~~~i~l~~s~~--~~~G~~v~~iG~p~g~~-----~~~~~g~vs~~~~~~~~~~~~~---  163 (348)
T 3qo6_A           98 QDKDVAVLRIDAPKN---K-LRPIPVGVSAD--LLVGQKVFAIGNPFGLD-----HTLTTGVISGLRREISSAATGR---  163 (348)
T ss_dssp             GGGTEEEEECCCCGG---G-CCCCCBCCSTT--CCTTCEEEEEECGGGCT-----TEEEEEEEEEEEEEECCSSSSS---
T ss_pred             CcCCEEEEEEcCCCC---C-ceeEEecCccc--CCCCCEEEEEECCCCCC-----CcEeEEEEEeeccccccccCCC---
Confidence            357999999998732   2 78899976543  56899999999986432     2233334444433333322111   


Q ss_pred             CCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        360 LHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       360 ~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      ....+++..     ...|.|||||||+..  +|+  |+||.|++.. ++.....+.+..+...++||++.++
T Consensus       164 ~~~~~i~~d-----a~i~~G~SGGPLvn~--~G~--vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~  226 (348)
T 3qo6_A          164 PIQDVIQTD-----AAINPGNSGGPLLDS--SGT--LIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVR  226 (348)
T ss_dssp             CEEEEEEEC-----SCCCTTCTTCEEECT--TSC--EEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHH
T ss_pred             cccCEEEEe-----CCcCCCCcHHHhhCC--CCe--EEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHh
Confidence            011233331     367899999999963  444  9999999753 4433457888999999999988765


No 237
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=98.53  E-value=1.5e-07  Score=83.98  Aligned_cols=127  Identities=17%  Similarity=0.138  Sum_probs=77.6

Q ss_pred             cccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCcc
Q psy16044        280 SFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVE  359 (436)
Q Consensus       280 ~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~  359 (436)
                      ..+||||||++.+.   .. +.|++|+...  .+..++.+++.||+....     .   .+..-+++...|.-.......
T Consensus       101 ~~~DlAllkl~~~~---~~-~~~~~l~~s~--~~~~G~~v~~iG~p~g~~-----~---~vt~Givs~~~r~~~~~~~~~  166 (239)
T 1l1j_A          101 EELDIAVIKIKASD---KK-FPYLEFGDSD--KVKIGEWAIAIGNPLGFQ-----H---TVTVGVVSATNRRIPKPDGSG  166 (239)
T ss_dssp             TTTTEEEEEBCCSS---SC-CCCCEECCGG--GCCTTCEEEEEECTTSSS-----C---EEEEEEEEEEEEEEECTTSSC
T ss_pred             CCCCEEEEEEcCCC---CC-CceEEecCcc--CCccccEEEEEECCCCCC-----C---cEEEEEEeccccccccCCCcc
Confidence            46899999999875   23 8889998643  246899999999985321     1   222223333333211100000


Q ss_pred             CCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        360 LHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       360 ~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      ....++|+.     ...|.|||||||+..  +|  .|+||.|++..-......+...-+...++++++.+
T Consensus       167 ~~~~~i~td-----a~i~~G~SGGPLv~~--~G--~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~  227 (239)
T 1l1j_A          167 YYVGLIQTD-----AAINPGNSGGPLLNI--HG--EVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTIL  227 (239)
T ss_dssp             EEEEEEEES-----SCCCTTTTTSEEECS--SS--EEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGC
T ss_pred             ccCCEEEEC-----CCCCCCCccHHhccC--CC--eEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHH
Confidence            124578873     368999999999963  34  39999999865111112455666666666665544


No 238
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=98.49  E-value=1.6e-07  Score=83.91  Aligned_cols=102  Identities=19%  Similarity=0.184  Sum_probs=62.5

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVEL  360 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~  360 (436)
                      .+|||||||+.     .. ++|++|+..   ....++.+++.||+....     ..+....+.......|...+......
T Consensus       102 ~~DiAll~l~~-----~~-~~~~~l~~~---~~~~G~~v~v~G~p~g~~-----~~~~~g~v~~~~~~~~~~~~~~~~~~  167 (237)
T 3k6y_A          102 SVDVAILAVPH-----LP-PPPLVFAAE---PAKTGADVVVLGYPGGGN-----FTATPARIREAIRLSGPDIYGDPEPV  167 (237)
T ss_dssp             TTTEEEEECTT-----CC-SCCCCBCSS---CCCTTCEEEEEECGGGCS-----CEEEEEEEEEEEEEEECCTTCCSSCE
T ss_pred             CCCEEEEEeCC-----CC-CCceecCCC---CCCCCCEEEEEECCCCCC-----CccceeEEEeeEeecccccccCCCcc
Confidence            58999999982     23 889999832   457899999999985321     12233333333333444433221001


Q ss_pred             CCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC
Q psy16044        361 HGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  405 (436)
Q Consensus       361 ~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~  405 (436)
                      ...+++.     ....|.|||||||++.  +|+  |+||+|++..
T Consensus       168 ~~~~~~~-----~~~~~~GdSGGPLv~~--~G~--vvGI~s~~~~  203 (237)
T 3k6y_A          168 TRDVYTI-----RADVEQGDSGGPLIDL--NGQ--VLGVVFGAAI  203 (237)
T ss_dssp             EEEEEEE-----ESCCCTTCTTCEEECT--TSC--EEEEEEEECS
T ss_pred             cccEEEe-----cCccCCCccHHHEECC--CCE--EEEEEEeecc
Confidence            1122332     1368999999999963  344  9999999753


No 239
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=98.46  E-value=2.2e-07  Score=82.58  Aligned_cols=122  Identities=15%  Similarity=0.116  Sum_probs=70.1

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVEL  360 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~  360 (436)
                      .+|||||+++.+..     +.+++|+...  ....++.+++.||+...     ...+....+.-.....+...+.   ..
T Consensus       109 ~~DlAlL~l~~~~~-----~~~~~l~~~~--~~~~G~~v~~~G~p~g~-----~~~~~~g~vs~~~~~~~~~~~~---~~  173 (231)
T 3tjo_A          109 KADIALIKIDHQGK-----LPVLLLGRSS--ELRPGEFVVAIGSPFSL-----QNTVTTGIVSTTQRGGKELGLR---NS  173 (231)
T ss_dssp             TTTEEEEECCCSSC-----CCCCCBCCGG--GCCTTCEEEEEEEEETT-----EEEEEEEEEEECC--------------
T ss_pred             CCCEEEEEecCCCC-----CCceecCCcC--CCCCCCEEEEEECCCCC-----CCceeeEEEeeccccccccccC---CC
Confidence            58999999997632     6777776543  24679999999998532     1112222222222111111111   01


Q ss_pred             CCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHh
Q psy16044        361 HGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       361 ~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      ...+++..     ...|.|||||||+..  +|+  |+||.||+..++    ......+...++|+++..+
T Consensus       174 ~~~~i~~d-----a~i~~G~SGGPLv~~--~G~--vVGI~s~~~~~g----~~~aip~~~i~~~l~~~~~  230 (231)
T 3tjo_A          174 DMDYIQTD-----AIINYGNAGGPLVNL--DGE--VIGINTLKVTAG----ISFAIPSDKIKKFLTESHD  230 (231)
T ss_dssp             --CCEEES-----SCCCTTTTTSEEECT--TSC--EEEEEEEEEETT----EEEEEEHHHHHHHHHHHHT
T ss_pred             cccEEEEc-----CCcCCCCchhHeecC--CCe--EEEEEeEEecCC----eEEEEEHHHHHHHHHHHhh
Confidence            12345542     257889999999953  344  999999986432    3455666667777766543


No 240
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=98.45  E-value=6.2e-07  Score=77.35  Aligned_cols=27  Identities=44%  Similarity=0.713  Sum_probs=21.1

Q ss_pred             cCCCCCeeeeEecCCcEEEEEEEeEcC-----CCCC
Q psy16044        219 IGDSGGPLQCSLKDGRWYLAGITSFGS-----GYCG  249 (436)
Q Consensus       219 ~gDsGgPl~~~~~~~~~~l~GI~S~g~-----~~C~  249 (436)
                      +|||||||+..  ++  .++||+|++.     +.|.
T Consensus       140 ~GDSGGPl~~~--~g--~~vGI~s~~~~~~~~~~c~  171 (198)
T 2h5c_A          140 RGDSGGSWITS--AG--QAQGVMSGGNVQSNGNNCG  171 (198)
T ss_dssp             TTCTTCEEECT--TC--BEEEEEEEECCCTTSBSTT
T ss_pred             CCcceeEEEee--CC--EEEEEEEeecCccCCCccc
Confidence            79999999931  33  4999999986     6673


No 241
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=98.29  E-value=4.7e-06  Score=69.27  Aligned_cols=79  Identities=14%  Similarity=0.119  Sum_probs=48.5

Q ss_pred             CeeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCC
Q psy16044         55 PHWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPT  134 (436)
Q Consensus        55 ~~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~  134 (436)
                      ...++|.+| +.+|||++||+.+.       ..+.|.++          ...+..+ +...|     ..||||||++.+.
T Consensus        20 ~~~GSGfii-~g~IlTn~HVV~~~-------~~i~V~~d----------g~~~~a~-vv~d~-----~~DlAlLkv~~~~   75 (163)
T 2w5e_A           20 EGKGTGFFS-GNDIVTAAHVVGNN-------TFVNVCYE----------GLMYEAK-VRYMP-----EKDIAFITCPGDL   75 (163)
T ss_dssp             TEEEEEEEE-TTEEEEEHHHHTTC-------SEEEEEET----------TEEEEEE-EEECC-----SSSEEEEECCTTC
T ss_pred             ceeEEEEEE-CCEEEecHHHhCCC-------ceEEEEEC----------CEEEEEE-EEEEC-----CCCEEEEEecCCC
Confidence            567999999 89999999999653       34555541          1223333 22333     4799999998643


Q ss_pred             CCCCCceeeeeecCCCCCCCCCCCcEEEEecC
Q psy16044        135 SARDKGVRAVCLTDADKRPVNPKQQCVATGWG  166 (436)
Q Consensus       135 ~~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG  166 (436)
                          ..+.|+.|....     ......++|+.
T Consensus        76 ----~~~~~l~l~~~~-----~~~~v~~~G~p   98 (163)
T 2w5e_A           76 ----HPTARLKLSKNP-----DYSCVTVMAYV   98 (163)
T ss_dssp             ----CCSCCCCBCSSC-----CTTEEEEEEEE
T ss_pred             ----CCcceEEcCCCC-----CCCEEEEEEeC
Confidence                123444554421     12566777764


No 242
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=98.26  E-value=4.1e-07  Score=77.57  Aligned_cols=115  Identities=18%  Similarity=0.276  Sum_probs=64.1

Q ss_pred             ccccceeecccccccCCCCee-----eeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVR-----AVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYG  355 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~-----picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~  355 (436)
                      .+|+||||++.+...... ++     ++.+....  .+..++.+...|.-.    .........+...+.-   ....+.
T Consensus        57 ~~D~Alikl~~~~~~~~~-v~~~~g~~~~i~~~~--~~~vG~~vc~~G~~t----G~t~G~vs~~~~tv~~---~~~~~~  126 (186)
T 2pfe_A           57 GRDMGWVRITSADTVTPL-VNRYNGGTVTVTGSQ--EAATGSSVCRSGATT----GWRCGTIQSKNQTVRY---AEGTVT  126 (186)
T ss_dssp             BSCEEEEEECTTSEEEEE-EECSSSCEEECCBCC--CCCTTCEEEEEETTT----EEEEEEEEEEEEEEEE---TTEEEE
T ss_pred             CCCEEEEEeCCCcccccc-eeccCCceEecCCCC--CCCCCCeEEEEEeCC----ceEEEEEEEEeeeEEe---CCceEe
Confidence            479999999987543332 33     34444322  345677655444321    0011122222222210   011111


Q ss_pred             CCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccHH
Q psy16044        356 DSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       356 ~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~~  423 (436)
                         .+...++|+.         .|||||||++.   +  .++||+||+.. |.. ..+.+|++|...++
T Consensus       127 ---~~~~~~~c~~---------~GDSGgpl~~~---~--~~vGi~s~g~~~c~~-~~~~~~~pi~~~l~  177 (186)
T 2pfe_A          127 ---GLTRTTACAE---------GGDSGGPWLTG---S--QAQGVTSGGTGDCRS-GGITFFQPINPLLS  177 (186)
T ss_dssp             ---EEEEESCCCC---------TTCTTCEEEET---T--EEEEEEEEEEEETTT-EEEEEEEEHHHHHH
T ss_pred             ---ceEeccEEec---------CCCccCeEEEC---C--EEEEEEeecCCCCCC-CCcEEEEEHHHHHH
Confidence               1234567764         59999999973   2  49999999875 544 44899999886654


No 243
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.24  E-value=5.2e-06  Score=77.72  Aligned_cols=127  Identities=12%  Similarity=0.013  Sum_probs=75.7

Q ss_pred             cccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccC---C
Q psy16044        280 SFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYG---D  356 (436)
Q Consensus       280 ~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~---~  356 (436)
                      ..+|||||+++.+    .. +.|++|+...  .+..++.+++.||..-...        .+..-+++...+.....   .
T Consensus        85 ~~~DlAllkl~~~----~~-~~~~~l~~~~--~~~~G~~v~~~G~p~g~~~--------~~~~G~vs~~~~~~~~~~~~g  149 (324)
T 1y8t_A           85 PTSDIAVVRVQGV----SG-LTPISLGSSS--DLRVGQPVLAIGSPLGLEG--------TVTTGIVSALNRPVSTTGEAG  149 (324)
T ss_dssp             TTTTEEEEEECSC----CS-CCCCEECCST--TCCTTCEEEEEECGGGCTT--------EEEEEEEEEEEEEECC-----
T ss_pred             CCCCEEEEEECCC----CC-CceEEecCcc--cCCCCCEEEEEEcCCCCCC--------cEeeeEEeecccccccccccC
Confidence            3689999999987    22 7899997543  3468999999999532111        11111222111111000   0


Q ss_pred             CccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCC--------CCCCCeEEEeCcccHHHHHHH
Q psy16044        357 SVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCA--------KSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       357 ~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~--------~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      .......++|+.     ...|.|||||||+..  +|  .|+||.||+..-.        .......+.-+...++++.+.
T Consensus       150 ~~~~~~~~i~~d-----~~~~~G~SGGPlv~~--~G--~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l  220 (324)
T 1y8t_A          150 NQNTVLDAIQTD-----AAINPGNSGGALVNM--NA--QLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADEL  220 (324)
T ss_dssp             --CCCEEEEEEC-----SCCCTTCTTEEEECT--TS--EEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHH
T ss_pred             cccccCCEEEEc-----CCCCCCCccCcEECC--CC--eEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHH
Confidence            001235688873     368999999999963  34  3999999975321        111245667777777777665


Q ss_pred             Hh
Q psy16044        429 IN  430 (436)
Q Consensus       429 i~  430 (436)
                      ++
T Consensus       221 ~~  222 (324)
T 1y8t_A          221 IS  222 (324)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 244
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=98.22  E-value=7.8e-06  Score=72.81  Aligned_cols=123  Identities=15%  Similarity=0.094  Sum_probs=74.1

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVEL  360 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~  360 (436)
                      .+|||||+++.+..     +.+++|+...  ....++.+++.||+....     ..+....+..+....+..      ..
T Consensus        99 ~~DlAll~l~~~~~-----~~~~~l~~~~--~~~~G~~v~~~G~p~~~~-----~~~~~g~vs~~~~~~~~~------~~  160 (237)
T 3lgi_A           99 LTDLAVLKINATGG-----LPTIPINARR--VPHIGDVVLAIGNPYNLG-----QTITQGIISATGRIGLNP------TG  160 (237)
T ss_dssp             TTTEEEEECCCSSC-----CCCCCCCTTC--CCCTTBEEEEEECGGGSC-----SEEEEEEEEEECCSSCCT------TS
T ss_pred             CCCEEEEEecCCCC-----CceEeccCcc--cCCCCCEEEEEECCCCCC-----CcEEEEEEEecccccccC------CC
Confidence            47999999998652     6777887532  356899999999985321     122223333222222211      11


Q ss_pred             CCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCC----CCCCeEEEeCcccHHHHHHHHh
Q psy16044        361 HGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAK----SGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       361 ~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~----~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      ....++..     ...|.|||||||+..  +|+  |+||.||+..-..    .........+...++++++.++
T Consensus       161 ~~~~i~~d-----~~i~~G~SGGPlv~~--~G~--vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~  225 (237)
T 3lgi_A          161 RQNFLQTD-----ASINHGNSGGALVNS--LGE--LMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIR  225 (237)
T ss_dssp             CSCCEEEC-----SCCCTTCTTCEEECT--TCC--EEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHH
T ss_pred             cCCEEEEc-----CccCCCCchHHeeCC--CCe--EEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHH
Confidence            23345442     257999999999963  444  9999999754321    1123555666666777766664


No 245
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.17  E-value=3.8e-06  Score=78.58  Aligned_cols=101  Identities=16%  Similarity=0.167  Sum_probs=67.7

Q ss_pred             cccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCcc
Q psy16044        280 SFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVE  359 (436)
Q Consensus       280 ~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~  359 (436)
                      ..+|+||||++.+.    . +.|++|+...  ....++.+++.||+....        +.+..-+++...|.........
T Consensus        92 ~~~DlAllkl~~~~----~-~~~~~l~~~~--~~~~G~~v~~~G~p~~~~--------~~v~~G~vs~~~~~~~~~g~~~  156 (325)
T 1lcy_A           92 PVADIATLRIQTKE----P-LPTLPLGRSA--DVRQGEFVVAMGSPFALQ--------NTITSGIVSSAQRPARDLGLPQ  156 (325)
T ss_dssp             TTTTEEEEECCCSS----C-CCCCCBCCGG--GCCTTCEEEECCCTTSSS--------SCCEEEEBCSCSCC--------
T ss_pred             CCCCEEEEEEcCCC----C-CceEEecccc--cCCCCCEEEEEECCCCCC--------CcEEeEEEecccccccccCCCC
Confidence            46899999999763    2 7788887542  346799999999996421        2344556666667532111112


Q ss_pred             CCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC
Q psy16044        360 LHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS  404 (436)
Q Consensus       360 ~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~  404 (436)
                      ....++|+.     ...|.|||||||+..  +|+  |+||.||+.
T Consensus       157 ~~~~~i~~d-----~~~~~G~SGGPl~~~--~G~--vVGI~s~~~  192 (325)
T 1lcy_A          157 TNVEYIQTD-----AAIDFGNAGGPLVNL--DGE--VIGVNTMKV  192 (325)
T ss_dssp             -CCCCEEES-----SCCSTTTTTSEEEET--TSC--EEEEEEEEE
T ss_pred             CCCCEEEEc-----CCCCCCCccccEECC--CCE--EEEEEeEee
Confidence            356789984     367999999999853  444  999999975


No 246
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.08  E-value=2.3e-05  Score=73.08  Aligned_cols=124  Identities=15%  Similarity=0.082  Sum_probs=77.1

Q ss_pred             cccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCcc
Q psy16044        280 SFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVE  359 (436)
Q Consensus       280 ~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~  359 (436)
                      ..+|+|||+++.+    .. +.|++|+...  .+..++.+++.||..-..     .   .+..-+++.... ..+..  .
T Consensus        87 ~~~DlAllk~~~~----~~-~~~~~l~~~~--~~~~G~~v~~~G~p~g~~-----~---~~~~g~vs~~~~-~~~~~--~  148 (318)
T 1te0_A           87 SLTDLAVLIIKAT----GG-LPTIPINARR--VPHIGDVVLAIGNPYNLG-----Q---TITQGIISATGR-IGLNP--T  148 (318)
T ss_dssp             TTTTEEEEECCCS----SC-CCCCCCCTTC--CCCTTCEEEEECCCSSSS-----C---CEEEEEEEECCC-CCCCT--T
T ss_pred             CCceEEEEEEeCC----CC-CceEEeeCcc--CCCCCCEEEEEEcCCCCC-----C---cEEeeEEecccc-cccCC--C
Confidence            4689999999986    22 7788887533  356899999999764211     1   122223322221 11111  1


Q ss_pred             CCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCC----CCCCCeEEEeCcccHHHHHHHHh
Q psy16044        360 LHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCA----KSGYPDVYTKLSFYLPWIRKQIN  430 (436)
Q Consensus       360 ~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~----~~~~p~v~t~V~~~~~WI~~~i~  430 (436)
                      ....++|..     ...|.|||||||+..  +|+  |+||.||+..-.    .......+.-+.....|+++.++
T Consensus       149 ~~~~~i~~d-----~~~~~G~SGGPl~~~--~G~--vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~  214 (318)
T 1te0_A          149 GRQNFLQTD-----ASINHGNSGGALVNS--LGE--LMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIR  214 (318)
T ss_dssp             CSCCSEEES-----SCCCTTTTTSEEECT--TCC--EEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHH
T ss_pred             CcCCEEEEC-----CCCCCCCCcCceECC--CCe--EEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHH
Confidence            245688873     367999999999963  444  999999986421    11224566777777777776553


No 247
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.08  E-value=1e-05  Score=75.86  Aligned_cols=121  Identities=15%  Similarity=0.118  Sum_probs=66.8

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVEL  360 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~  360 (436)
                      .+|||||+++.+..     +.++.|+...  .+..++.+++.||+....     ..+....+.......+...+..   .
T Consensus        92 ~~DlAlL~l~~~~~-----~~~~~l~~~~--~~~~G~~v~~~G~p~g~~-----~~~~~g~vs~~~~~~~~~~~~~---~  156 (332)
T 3num_A           92 KADIALIKIDHQGK-----LPVLLLGRSS--ELRPGEFVVAIGSPFSLQ-----NTVTTGIVSTTQRGGKELGLRN---S  156 (332)
T ss_dssp             TTTEEEEEECCSSC-----CCCCCBCCTT--SCCTTCEEEEECC----------CCEEEEEEEEC---------------
T ss_pred             CCCeEEEEEcCCCC-----CceeeecCcc--cCCCCCEEEEEECCCCCC-----cceeeeEEEeecccccccCcCC---C
Confidence            47999999998622     6677776543  356799999999985321     1222222332222222221111   1


Q ss_pred             CCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        361 HGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       361 ~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      ...+++..     ...|.|||||||+..  +|+  |+||.||+...+    .+....+.....|+.+.+
T Consensus       157 ~~~~i~~d-----~~i~~G~SGGPlv~~--~G~--vvGI~s~~~~~g----~~~aip~~~i~~~l~~~~  212 (332)
T 3num_A          157 DMDYIQTD-----AIINYGNAGGPLVNL--DGE--VIGINTLKVTAG----ISFAIPSDKIKKFLTESH  212 (332)
T ss_dssp             --CCEEES-----SCCCTTTTTSEEEET--TSC--EEEEEEEEEETT----EEEEEEHHHHHHHHHHHC
T ss_pred             cCCEEEEE-----CCcCCCCcHHHhhCC--CCc--EEEEEeeEeccc----ceEEECHHHHHHHHHHHh
Confidence            12344442     256789999999963  344  999999976422    345566666666666543


No 248
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=97.98  E-value=4.4e-05  Score=68.07  Aligned_cols=124  Identities=17%  Similarity=0.109  Sum_probs=72.2

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVEL  360 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~  360 (436)
                      .+||||||++.+..     +.++.|....  .+..++.+++.||..-..     .   .+..-+++...+.. +..  ..
T Consensus       110 ~~DlAlLkv~~~~~-----~~~~~l~~s~--~~~~G~~v~aiG~P~g~~-----~---~vt~G~vs~~~~~~-~~~--~~  171 (245)
T 3sti_A          110 QSDIALLQIQNPSK-----LTQIAIADSD--KLRVGDFAVAVGNPFGLG-----Q---TATSGIVSALGRSG-LNL--EG  171 (245)
T ss_dssp             TTTEEEEEESSCCS-----CCCCCBCCGG--GCCTTBEEEEEECGGGSC-----C---EEEEEEEEECSSCS-SCC--TT
T ss_pred             CCCEEEEEeccCCC-----CceeeecCcC--CCCCCCEEEEEECCCCCC-----C---cEEeeEEeeecccc-cCC--CC
Confidence            57999999986532     5667776432  356899999999753211     1   12222333222221 111  12


Q ss_pred             CCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCCCC-CCCCCeEEEeCcccHHHHHHHHhh
Q psy16044        361 HGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSGCA-KSGYPDVYTKLSFYLPWIRKQINI  431 (436)
Q Consensus       361 ~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~-~~~~p~v~t~V~~~~~WI~~~i~~  431 (436)
                      ...++|..     ...|.|+|||||+..  +|+  |+||.|+..... .....+...-+...++++++.++.
T Consensus       172 ~~~~i~td-----a~i~~G~SGGPLvn~--~G~--vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~  234 (245)
T 3sti_A          172 LENFIQTD-----ASINRGNSGGALLNL--NGE--LIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDF  234 (245)
T ss_dssp             CSSCEEES-----SCCCTTTTTSEEECT--TSC--EEEEEECCC------CCCEEEEEHHHHHHHHHHHHHH
T ss_pred             ccCEEEEc-----CCcCCCcchhHeecC--CCe--EEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHc
Confidence            34556653     257889999999853  444  999999976432 112245556666667777666643


No 249
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=97.94  E-value=3.7e-06  Score=71.88  Aligned_cols=115  Identities=20%  Similarity=0.259  Sum_probs=62.6

Q ss_pred             ccccceeecccccccCCCCeee------eccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCcccccccc
Q psy16044        281 FLSAALLKLSRPTSARDKGVRA------VCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKY  354 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~p------icl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~  354 (436)
                      .+|+||||++.+...... +++      +.|+...  .+..++.+...|.-.    ......+..+...+...+   ..+
T Consensus        59 ~~DiAlikl~~~~~~~~~-v~~~g~~~~~~l~~~~--~~~vG~~v~~~G~~t----G~t~G~v~~~~~~v~~~~---~~~  128 (188)
T 2oua_A           59 GNDAAFVRGTSNFTLTNL-VSRYNSGGYATVSGSS--TAPIGSQVCRSGSTT----GWYCGTIQARNQTVSYPQ---GTV  128 (188)
T ss_dssp             BSCEEEEEEEESCEEEEE-EECGGGCSEEECCBCC--CCCTTCEEEEEETTT----EEEEEEEEEEEEEEEETT---EEE
T ss_pred             CCCEEEEEeCCCCccccc-eeecCCcceEeccCcc--CCCCCCeEEEEEcCC----CeEEEEEEEEeeEEEeCC---CcE
Confidence            379999999887543222 332      3454322  355677666654210    001112222222221000   001


Q ss_pred             CCCccCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccHH
Q psy16044        355 GDSVELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYLP  423 (436)
Q Consensus       355 ~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~~  423 (436)
                      .   .+...++|+.         .|||||||++.   +  .++||.||+.. |.. ..+.+|++|...++
T Consensus       129 ~---~~~~~~~~~~---------~GDSGgpl~~~---~--~~vGi~s~~~~~~~~-~~~~~~~pi~~~l~  180 (188)
T 2oua_A          129 H---SLTRTSVCAE---------PGDSGGSFISG---T--QAQGVTSGGSGNCRT-GGTTFYQEVNPMLN  180 (188)
T ss_dssp             E---EEEEESCCCC---------TTCTTCEEEET---T--EEEEEEEEEEEETTT-EEEEEEEESHHHHH
T ss_pred             e---eeEeeeeecC---------CCCccceEEEC---C--EEEEEEeccCCCCCC-CCceEEEEHHHHHH
Confidence            0   1223456653         59999999963   3  49999999874 654 34789999876554


No 250
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.80  E-value=0.00011  Score=72.49  Aligned_cols=86  Identities=19%  Similarity=0.212  Sum_probs=53.2

Q ss_pred             eeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCCC
Q psy16044         56 HWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPTS  135 (436)
Q Consensus        56 ~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~  135 (436)
                      ..-+|.+|++.+|||.+|++.+.       ..+.|.+-.    .    ...+..+-+...|.     .||||||++.+-.
T Consensus        74 s~GSGfiI~dG~IlTN~HVV~~a-------~~i~V~~~~----d----g~~~~A~vv~~D~~-----~DLAvLkv~~~~~  133 (539)
T 4fln_A           74 STGSAFMIGDGKLLTNAHCVEHD-------TQVKVKRRG----D----DRKYVAKVLVRGVD-----CDIALLSVESEDF  133 (539)
T ss_dssp             EEEEEEEEETTEEEECGGGGTTE-------EEEEEECTT----C----CCCEEEEEEEEETT-----TTEEEEEECCSSS
T ss_pred             eEEEEEEEECCEEEEChHHcCCC-------CeEEEEEcc----C----CEEEEEEEEEECCC-----CCEEEEEEeCCcC
Confidence            45789999999999999998652       445554421    0    11223333334444     6999999986532


Q ss_pred             CCCCceeeeeecCCCCCCCCCCCcEEEEecCc
Q psy16044        136 ARDKGVRAVCLTDADKRPVNPKQQCVATGWGR  167 (436)
Q Consensus       136 ~~~~~v~pi~l~~~~~~~~~~~~~~~~~GwG~  167 (436)
                        ...+.|+.+..    ....+..+.++|+-.
T Consensus       134 --~~~~~pl~~g~----~~~vGd~V~aiG~P~  159 (539)
T 4fln_A          134 --WKGAEPLRLGH----LPRLQDSVTVVGYPL  159 (539)
T ss_dssp             --STTCCCCCBCC----CCCTTCEEEEEECCS
T ss_pred             --CcCCceeecCC----cCcCCCeEEEEEcCC
Confidence              12244555543    234578899999753


No 251
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=97.79  E-value=7.9e-05  Score=77.60  Aligned_cols=84  Identities=19%  Similarity=0.161  Sum_probs=54.2

Q ss_pred             eEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCCCCC
Q psy16044         58 CGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPTSAR  137 (436)
Q Consensus        58 C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~~~  137 (436)
                      =.+|||+|+||+|+||=. ..         -.|.+|..        ...+   +++.|++|..  .|+++.||.+.+.- 
T Consensus        58 G~aTLI~pqYiVSvaHn~-gy---------~~v~fG~~--------~n~Y---~iV~rnn~~~--~Dy~~pRL~K~VTE-  113 (1048)
T 1wxr_A           58 GVATLINPQYIASVKHNG-GY---------TNVSFGDG--------ENRY---NIVDRNNAPS--LDFHAPRLDKLVTE-  113 (1048)
T ss_dssp             CCCEEEETTEEEBCTTCC-SC---------CEECCTTS--------CCCE---EEEECCBCSS--SSCBCCEESSCCCS-
T ss_pred             ceEEEEcCcEEEEeeecC-CC---------ceEEeCCC--------cceE---EEEeeCCCCC--CCeeeeeccccccc-
Confidence            468999999999999932 11         24556640        0122   2367777753  49999999998872 


Q ss_pred             CCceeeeeecCCC-----CCCCCCCCcEEEEecCcc
Q psy16044        138 DKGVRAVCLTDAD-----KRPVNPKQQCVATGWGRV  168 (436)
Q Consensus       138 ~~~v~pi~l~~~~-----~~~~~~~~~~~~~GwG~~  168 (436)
                         +.|+.+....     ..........+-+|=|..
T Consensus       114 ---vaP~~~t~~g~~~~~y~d~ery~~f~RvGsG~q  146 (1048)
T 1wxr_A          114 ---VAPTAVTAQGAVAGAYLDKERYPVFYRLGSGTQ  146 (1048)
T ss_dssp             ---SCCCCBCSSCSCTTGGGCTTTCCCEEEEECSCE
T ss_pred             ---ccceeeccccCccccccccccCceEEEECCcEE
Confidence               7787776542     111234556677787765


No 252
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=97.78  E-value=4.3e-05  Score=64.80  Aligned_cols=31  Identities=16%  Similarity=0.015  Sum_probs=24.1

Q ss_pred             eEEEeeeccCCCCCCeeeEEEEe---cCCEEEecCCCcCC
Q psy16044         41 QVSLQVLHPRLGLMPHWCGAVLI---HPSWVVTAAHCIHN   77 (436)
Q Consensus        41 ~v~i~~~~~~~~~~~~~C~GtLI---s~~~VLTAAhC~~~   77 (436)
                      ++.|+..+      .|+|.|+.+   ..+++||||||+..
T Consensus        18 vv~l~~~d------~h~G~g~~V~~~G~~~LlTA~Hv~~~   51 (191)
T 1zyo_A           18 LVAIKSGP------TTIGFGCRTKIDGEDCLLTAHHVWCN   51 (191)
T ss_dssp             EEEEEETT------EEEEEEEEEEC--CEEEEECHHHHTS
T ss_pred             EEEEEeCC------eEEEEEEEEEECCCcEEEEChhhCcC
Confidence            66665532      789999999   56899999999855


No 253
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.21  E-value=0.0023  Score=60.06  Aligned_cols=121  Identities=17%  Similarity=0.099  Sum_probs=66.2

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVEL  360 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~  360 (436)
                      ..||||||++.+..     +.++.|....  .+..++.+++.||..-..        ..+..-+++...+.. +..  ..
T Consensus       110 ~~DlAlLkv~~~~~-----~~~~~l~~s~--~~~~G~~V~aiG~p~g~~--------~~vt~G~Vs~~~~~~-~~~--~~  171 (345)
T 3stj_A          110 QSDIALLQIQNPSK-----LTQIAIADSD--KLRVGDFAVAVGNPFGLG--------QTATSGIVSALGRSG-LNL--EG  171 (345)
T ss_dssp             TTTEEEEEESSCCS-----CCCCCBCCGG--GCCTTBEEEEEECGGGCS--------CEEEEEEEEEEEECC-SSS--SS
T ss_pred             CCCEEEEEEcccCC-----CceEeecCcc--cCCCCCEEEEEECCCCCC--------CcEEeeEEeeecccc-cCC--CC
Confidence            47999999976532     5566665432  356899999999964221        112222232222221 111  11


Q ss_pred             CCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccHHHHHHH
Q psy16044        361 HGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYLPWIRKQ  428 (436)
Q Consensus       361 ~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~~WI~~~  428 (436)
                      ...+++..     ...|.|+|||||+..  +|+  ++||.|+... .+.....+...-+.....++++.
T Consensus       172 ~~~~iq~d-----a~i~~GnSGGPLvn~--~G~--vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l  231 (345)
T 3stj_A          172 LENFIQTD-----ASINRGNSGGALLNL--NGE--LIGINTAILAPGGGSVGIGFAIPSNMARTLAQQL  231 (345)
T ss_dssp             SCCEEEEC-----SCCCTTCTTCEEECT--TSC--EEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHH
T ss_pred             ccCEEEEe-----cccCCCcCccceeCC--CCE--EEEEEeccccCCCCcceeEEEEehHHHHHHHHHH
Confidence            23445542     257899999999863  454  9999998643 22211233444444444444443


No 254
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=96.14  E-value=0.04  Score=45.51  Aligned_cols=23  Identities=17%  Similarity=0.021  Sum_probs=19.0

Q ss_pred             CeeeEEEEecCC-EEEecCCCcCC
Q psy16044         55 PHWCGAVLIHPS-WVVTAAHCIHN   77 (436)
Q Consensus        55 ~~~C~GtLIs~~-~VLTAAhC~~~   77 (436)
                      ...++|-.|+.+ +||||+|-+.+
T Consensus        14 ~G~GsgF~i~~~g~vVTA~HVv~~   37 (198)
T 1mbm_A           14 YGTGSVWTRNNEVVVLTASHVVGR   37 (198)
T ss_dssp             EEEEEEEEETTEEEEEEEHHHHCT
T ss_pred             CCccceEEECCCeEEEEeeeEEcc
Confidence            466999999976 69999998854


No 255
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=96.13  E-value=0.031  Score=54.30  Aligned_cols=124  Identities=18%  Similarity=0.127  Sum_probs=63.2

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEe--cCCCCCCCCccccceEEEEEeeCccccccccCCCc
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATG--WGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSV  358 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~G--wg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~  358 (436)
                      ..|+||||++.     .. +.++.|....  .+..++.+++.|  ||.....  .........+.-+...    .+..  
T Consensus       124 ~~DlAlLkv~~-----~~-l~~~~l~~s~--~~~~G~~V~aiG~P~G~~~~~--~~~~vt~Givs~~~r~----~~~~--  187 (451)
T 3pv2_A          124 ETDLAVLKIDA-----KN-LKSLVIGDSD--KLEVGDFVVAIGNPFGLNSFG--NSQSATFGIVSALKRS----DLNI--  187 (451)
T ss_dssp             TTTEEEEECCC-----SS-CCCCCBCCGG--GCCTTCEEEEEECCCCC-------CCEEEEEEEEEEC------------
T ss_pred             CCcEEEEEEcC-----cC-CceeEecCcc--cCCCCCEEEEEECCCCccccc--cCCceeEEEEeecccc----ccCC--
Confidence            57999999964     12 5566665432  356899999999  6643211  1122222223222221    0110  


Q ss_pred             cCCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC-CCCCCCCeEEEeCcccHHHHHHHH
Q psy16044        359 ELHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG-CAKSGYPDVYTKLSFYLPWIRKQI  429 (436)
Q Consensus       359 ~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~-c~~~~~p~v~t~V~~~~~WI~~~i  429 (436)
                      .....+++..     ...+.|+|||||+..  +|+  ++||.++... .+.....+...-+.....++++.+
T Consensus       188 ~~~~~~iqtd-----a~i~~GnSGGPl~n~--~G~--VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~  250 (451)
T 3pv2_A          188 EGVENFIQTD-----AAINPGNSGGALVNA--KGE--LIGINTAILSPYGGNVGIGFAIPINMVKDVAQQII  250 (451)
T ss_dssp             ----CCEEES-----SCCCGGGTTSEEEET--TCC--EEEEEECCC------CCCEEEEEHHHHHHHHHHHH
T ss_pred             CCcceEEEEe-----cccCCCCCcCcccCC--CCe--EEEEEeEeecCCCCccceeeeehhHHHHHHHHHHH
Confidence            1123455542     256789999999853  454  9999998653 212122344455555555555444


No 256
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=96.02  E-value=0.035  Score=53.77  Aligned_cols=98  Identities=18%  Similarity=0.166  Sum_probs=56.8

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCccC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVEL  360 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~  360 (436)
                      ..|+||||++.+..     +.++.|....  .+..++.+++.||.....     ......   +++...+.. +..  .-
T Consensus       110 ~~DlAllkv~~~~~-----l~~~~l~~s~--~~~~G~~v~aiG~P~g~~-----~~vt~G---~vs~~~r~~-~~~--~~  171 (436)
T 4a8c_A          110 QSDIALLQIQNPSK-----LTQIAIADSD--KLRVGDFAVAVGNPFGLG-----QTATSG---IVSALGRSG-LNL--EG  171 (436)
T ss_pred             CCCEEEEEecCCCC-----CceEeccCcc--cCCCCCEEEEEEcCCCCC-----ccEEEE---EEeeecccc-cCC--CC
Confidence            47999999976432     6677776433  356899999999964221     111122   222222211 110  01


Q ss_pred             CCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecCC
Q psy16044        361 HGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  405 (436)
Q Consensus       361 ~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~  405 (436)
                      ....+...     ...|.|+|||||+..  +|+  ++||.++...
T Consensus       172 ~~~~iq~d-----a~i~~GnSGGPl~n~--~G~--vvGI~~~~~~  207 (436)
T 4a8c_A          172 LENFIQTD-----ASINRGNAGGALLNL--NGE--LIGINTAILA  207 (436)
T ss_pred             ccCEEEEc-----CccCCCCCcCcccCC--CCE--EEEEEeeecc
Confidence            12344432     256889999999864  343  9999988653


No 257
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=96.01  E-value=0.0054  Score=52.52  Aligned_cols=40  Identities=33%  Similarity=0.518  Sum_probs=25.6

Q ss_pred             cCCCCceeeeEecCCcEEEEEEEEecC-----C-CC--CCCCCeEEEeCccc
Q psy16044        378 IGDSGGPLQCSLKDGRWYLAGITSFGS-----G-CA--KSGYPDVYTKLSFY  421 (436)
Q Consensus       378 ~gdsGgpl~~~~~~~~~~l~Gi~S~~~-----~-c~--~~~~p~v~t~V~~~  421 (436)
                      .|||||||+..  ++  .++||.|++.     + |.  .......|+.|...
T Consensus       140 ~GDSGGPl~~~--~g--~~vGI~s~~~~~~~~~~c~~~~~~g~~f~~Pi~~v  187 (198)
T 2h5c_A          140 RGDSGGSWITS--AG--QAQGVMSGGNVQSNGNNCGIPASQRSSLFERLQPI  187 (198)
T ss_dssp             TTCTTCEEECT--TC--BEEEEEEEECCCTTSBSTTSCGGGCCEEEEEHHHH
T ss_pred             CCcceeEEEee--CC--EEEEEEEeecCccCCCccccccCCceEEEEEHHHH
Confidence            59999999931  33  3999999984     3 41  11124667766543


No 258
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=95.35  E-value=0.16  Score=42.62  Aligned_cols=37  Identities=22%  Similarity=0.045  Sum_probs=23.6

Q ss_pred             CCCcceEEEeeeccCCCCCCeeeEEEEecC-CEEEecCCCcCCC
Q psy16044         36 GAWPWQVSLQVLHPRLGLMPHWCGAVLIHP-SWVVTAAHCIHND   78 (436)
Q Consensus        36 ~~~Pw~v~i~~~~~~~~~~~~~C~GtLIs~-~~VLTAAhC~~~~   78 (436)
                      +.-|-.|.+.-..      ....+|.-|+. ..||||+|-+.+.
T Consensus        16 ~~~~N~v~V~G~~------~GsGt~F~i~g~~~VvTA~HVVg~~   53 (213)
T 3fan_A           16 KPSLNTVNVVGSS------MGSGGVFTIDGKIKCVTAAHVLTGN   53 (213)
T ss_dssp             SCCTTEEEEESSS------EEEEEEEEETTEEEEEEEGGGSBTT
T ss_pred             CCCCCeEEEeecC------CCceEEEEECCcEEEEEeccEeCCC
Confidence            3445566664322      34566777773 4899999988663


No 259
>3syj_A Adhesion and penetration protein autotransporter; bacterial aggregation and biofilm formation, SELF-associatin autotransporter (SAAT); 2.20A {Haemophilus influenzae}
Probab=94.74  E-value=0.15  Score=52.62  Aligned_cols=31  Identities=29%  Similarity=0.584  Sum_probs=23.2

Q ss_pred             CCccCCCCCeeeeE-ecCCcEEEEEEEeEcCC
Q psy16044        216 GACIGDSGGPLQCS-LKDGRWYLAGITSFGSG  246 (436)
Q Consensus       216 ~~C~gDsGgPl~~~-~~~~~~~l~GI~S~g~~  246 (436)
                      ..-.||||+||+.- ...++|+|+|+.+.+.+
T Consensus       212 yg~~GDSGSPLFayD~~~~KWvl~Gv~~~~~~  243 (1011)
T 3syj_A          212 AGSKGDSGSPMFIYDAEKQKWLINGILREGNP  243 (1011)
T ss_dssp             BCCTTCTTCEEEEEETTTTEEEEEEEECC---
T ss_pred             CCCCCCCCCcceeeEcCCCeEEEEEEeecccc
Confidence            35689999999874 45779999999987654


No 260
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=92.81  E-value=0.19  Score=52.74  Aligned_cols=56  Identities=27%  Similarity=0.506  Sum_probs=38.8

Q ss_pred             CCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHhhhhh
Q psy16044        375 GACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQINIAVD  434 (436)
Q Consensus       375 ~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~~~~  434 (436)
                      ..-.||||+||+.-+ +.++|+|+|+.|.+..-+..+  --|.-+..  +|+++++++..+
T Consensus       201 ~~~~GDSGSPlF~yD~~~kKWvLvGv~s~g~~~g~~~--~~~~~~~~--~f~~~~~~~d~~  257 (1048)
T 1wxr_A          201 YGEAGDSGSPLFAFDTVQNKWVLVGVLTAGNGAGGRG--NNWAVIPL--DFIGQKFNEDND  257 (1048)
T ss_dssp             BCCTTCTTCEEEEEETTTTEEEEEEEEEEESSTTCSC--EEEEECCH--HHHHHHHHTTBC
T ss_pred             CCCCCCCCCeeeEEEcCCCeEEEEEEecccccCCccc--ceEEEeCH--HHhhhhhhcccc
Confidence            455699999998876 578999999998554312211  45555553  898888765543


No 261
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=91.80  E-value=1.4  Score=42.53  Aligned_cols=98  Identities=20%  Similarity=0.196  Sum_probs=55.3

Q ss_pred             cccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCCCCCCCCccccceEEEEEeeCccccccccCCCcc
Q psy16044        280 SFLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVE  359 (436)
Q Consensus       280 ~~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~  359 (436)
                      ...|+|||+++.+.    . +.++.|....  .+..++.+++.||..-..     .....-.+.-+...    ....  .
T Consensus       132 ~~~DlAvlkv~~~~----~-~~~~~l~~s~--~~~~G~~V~aiG~P~g~~-----~tvt~Givs~~~r~----~~~~--~  193 (448)
T 1ky9_A          132 PRSDIALIQIQNPK----N-LTAIKMADSD--ALRVGDYTVAIGNPFGLG-----ETVTSGIVSALGRS----GLNA--E  193 (448)
T ss_dssp             TTTTEEEEEESSCC----S-CCCCCBCCGG--GCCTTCEEEEEECTTSSS-----CEEEEEEEEEESSC----C------
T ss_pred             CCCCEEEEEecCCC----C-CceEEecccc--cCCCCCEEEEEECCCCCC-----CeEEeEEEeecccc----ccCC--C
Confidence            35899999998642    1 4555554332  356899999999754211     11222222222211    0000  0


Q ss_pred             CCCCceecccCCCCCCCccCCCCceeeeEecCCcEEEEEEEEecC
Q psy16044        360 LHGGHLCGGQLDGFSGACIGDSGGPLQCSLKDGRWYLAGITSFGS  404 (436)
Q Consensus       360 ~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~  404 (436)
                      -...++++.     ...+.|+|||||+..  +|+  ++||.++..
T Consensus       194 ~~~~~iqtd-----a~i~~GnSGGpl~n~--~G~--vvGI~~~~~  229 (448)
T 1ky9_A          194 NYENFIQTD-----AAINRGNAGGALVNL--NGE--LIGINTAIL  229 (448)
T ss_dssp             -CCCCEEES-----CCCTTSCCCSEEECT--TSC--EEEEEECSS
T ss_pred             CccCEEEEc-----CCCCCCCCCCeeECC--CCE--EEEEEEEee
Confidence            123445542     256789999999863  454  999999764


No 262
>3syj_A Adhesion and penetration protein autotransporter; bacterial aggregation and biofilm formation, SELF-associatin autotransporter (SAAT); 2.20A {Haemophilus influenzae}
Probab=87.85  E-value=0.72  Score=47.75  Aligned_cols=55  Identities=16%  Similarity=0.341  Sum_probs=35.2

Q ss_pred             CCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHhhhh
Q psy16044        375 GACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQINIAV  433 (436)
Q Consensus       375 ~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~~~  433 (436)
                      ..-.||||+||+.-+ +.++|+|+|+.+.+.+....  ---|+-+.  .+|+.+++.+..
T Consensus       212 yg~~GDSGSPLFayD~~~~KWvl~Gv~~~~~~~~g~--~n~~~i~~--~~f~~~~~~~D~  267 (1011)
T 3syj_A          212 AGSKGDSGSPMFIYDAEKQKWLINGILREGNPFEGK--ENGFQLVR--KSYFDEIFERDL  267 (1011)
T ss_dssp             BCCTTCTTCEEEEEETTTTEEEEEEEECC----------EEEEECC--HHHHHHHHHHHC
T ss_pred             CCCCCCCCCcceeeEcCCCeEEEEEEeeccccccCc--ccceEEec--hHHhhhhhhccc
Confidence            345699999998876 67899999999875433221  12355443  589988887554


No 263
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=87.71  E-value=2.9  Score=32.94  Aligned_cols=42  Identities=24%  Similarity=0.449  Sum_probs=26.4

Q ss_pred             CeEEeccCCC--CCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        204 GHLCGGQLDG--FSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       204 ~~~Ca~~~~~--~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      .|+-++....  .-++-.||-|.|.++. .++.|+++||-.-+..
T Consensus       132 GmlltganaK~mdLGT~PGDCGcPYvyk-rgndwvv~GVH~Aatr  175 (194)
T 2fyq_A          132 GMLLTGANAKGMDLGTIPGDCGAPYVHK-RGNDWVVCGVHAAATK  175 (194)
T ss_dssp             EEECC-----------CGGGTTCEEEEE-ETTEEEEEEEEEEECS
T ss_pred             eeEEecCCcccCcCCCCCCCCCCceEEe-eCCceEEEEEEEeecc
Confidence            4555443332  2456799999999987 5899999999876643


No 264
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=86.21  E-value=4.3  Score=39.98  Aligned_cols=40  Identities=13%  Similarity=0.087  Sum_probs=25.3

Q ss_pred             ccccceeecccccccCCCCeeeeccCCCCCCCCCCCCeEEEEecCC
Q psy16044        281 FLSAALLKLSRPTSARDKGVRAVCLTDADKRPVNPKQQCVATGWGR  326 (436)
Q Consensus       281 ~~diali~l~~~~~~~~~~v~picl~~~~~~~~~~~~~~~~~Gwg~  326 (436)
                      ..|+||||++.+-.+..  +.|+.+...    ...++.+.+.|+-.
T Consensus       120 ~~DLAvLkv~~~~~~~~--~~pl~~g~~----~~vGd~V~aiG~P~  159 (539)
T 4fln_A          120 DCDIALLSVESEDFWKG--AEPLRLGHL----PRLQDSVTVVGYPL  159 (539)
T ss_dssp             TTTEEEEEECCSSSSTT--CCCCCBCCC----CCTTCEEEEEECCS
T ss_pred             CCCEEEEEEeCCcCCcC--CceeecCCc----CcCCCeEEEEEcCC
Confidence            47999999986532211  344444322    34688899998753


No 265
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=85.61  E-value=6.7  Score=33.84  Aligned_cols=28  Identities=32%  Similarity=0.478  Sum_probs=21.5

Q ss_pred             CCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        216 GACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       216 ~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      ++=.|+-|.||+.. .+|.  ++||-|.+..
T Consensus       145 sT~~G~CGlPlVs~-~Dg~--IVGiHsl~~~  172 (241)
T 3mmg_A          145 TTKDGQAGSPLVSI-IDGN--ILGIHSLTHT  172 (241)
T ss_dssp             CCCTTCTTCEEEET-TTCC--EEEEEEEEET
T ss_pred             CCCCCcCCCeEEEc-CCCc--EEEEEecccC
Confidence            45578999999986 3554  9999998754


No 266
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=84.24  E-value=2.7  Score=33.01  Aligned_cols=42  Identities=26%  Similarity=0.425  Sum_probs=28.5

Q ss_pred             CeEEeccCCC--CCCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        204 GHLCGGQLDG--FSGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       204 ~~~Ca~~~~~--~~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      .|+-++....  .-++-.||-|.|.++. .++.|+++||..-+..
T Consensus       121 GmlltganaK~mdLGT~PGDCGcPYvyk-rgn~~vv~GVHtAatr  164 (185)
T 4ash_A          121 GMLLTGSNAKAQDLGTIPGDAGCPYVYK-KGNTWVVIGVHVAATR  164 (185)
T ss_dssp             EEECC-------CCSCCTTCTTCEEEEE-ETTEEEEEEEEEEECS
T ss_pred             eeEEecCCcccCcCCCCCCCCCCceEEe-eCCceEEEEEEEeecc
Confidence            4444433322  2456799999999987 5899999999877643


No 267
>3h09_A IGA1 protease, immunoglobulin A1 protease; serine protease, beta helix, hydrolase, M protease, secreted, transmembrane, virulence; 1.75A {Haemophilus influenzae}
Probab=83.74  E-value=0.66  Score=47.90  Aligned_cols=28  Identities=39%  Similarity=0.750  Sum_probs=23.4

Q ss_pred             CccCCCCCeeeeE-ecCCcEEEEEEEeEc
Q psy16044        217 ACIGDSGGPLQCS-LKDGRWYLAGITSFG  244 (436)
Q Consensus       217 ~C~gDsGgPl~~~-~~~~~~~l~GI~S~g  244 (436)
                      .-.||||+||+.- ...++|+|+||.++.
T Consensus       258 ~~~GDSGSPlF~yD~~~~kWvl~Gvl~~~  286 (989)
T 3h09_A          258 AVLGDSGSPLFVYDREKGKWLFLGSYDFW  286 (989)
T ss_dssp             CCTTCTTCEEEEEETTTTEEEEEEEEEEE
T ss_pred             CCcCCCCCccceeecccceEEEEEEeecc
Confidence            4689999999875 457799999999874


No 268
>3sze_A Serine protease ESPP; parallel beta-helix, hydrolase; 2.50A {Escherichia coli O157}
Probab=80.29  E-value=0.98  Score=46.72  Aligned_cols=27  Identities=30%  Similarity=0.436  Sum_probs=22.0

Q ss_pred             CccCCCCCeeeeE-ecCCcEEEEEEEeE
Q psy16044        217 ACIGDSGGPLQCS-LKDGRWYLAGITSF  243 (436)
Q Consensus       217 ~C~gDsGgPl~~~-~~~~~~~l~GI~S~  243 (436)
                      .-.||||+||+.- ...++|+|+||.+-
T Consensus       203 ~~~GDSGSPlFaYD~~~~KWvl~GVl~~  230 (968)
T 3sze_A          203 ASQGDAGSALFVYDNQKKKWVVAGTVWG  230 (968)
T ss_dssp             CCTTCTTCEEEEEETTTTEEEEEEEEEE
T ss_pred             CCcCCCCCcceeEEcCCCeEEEEEEEec
Confidence            4689999999874 45779999999754


No 269
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=79.47  E-value=16  Score=31.21  Aligned_cols=137  Identities=12%  Similarity=0.129  Sum_probs=68.2

Q ss_pred             EEecCCEEEecCCCcCCCCCCCCCCcceEEE--eccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCCCCCC
Q psy16044         61 VLIHPSWVVTAAHCIHNDIFSLPIPELWTAV--LGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPTSARD  138 (436)
Q Consensus        61 tLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~--~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~~~~  138 (436)
                      -|.--.||||-+|-+....      ..+.+.  .|.+......       -.++..-     ...||.||||.+.++-+.
T Consensus        42 gigyG~~iItn~HLf~~nn------G~L~I~s~hG~f~v~nt~-------~lki~~i-----~g~DiiiIrmPkDfpPf~  103 (229)
T 1lvm_A           42 GIGFGPFIITNKHLFRRNN------GTLLVQSLHGVFKVKNTT-------TLQQHLI-----DGRDMIIIRMPKDFPPFP  103 (229)
T ss_dssp             EEEETTEEEECGGGGGCCS------SEEEEEETTEEEEESCGG-------GSEEEEC-----TTSSCEEEECCTTSCCCC
T ss_pred             EEeECCEEEeChhhhccCC------CcEEEEeCCCeEEeCCCC-------ceeeEEe-----CCccEEEEeCCCcCCCcc
Confidence            3455679999999987632      234444  3333322111       1122222     246999999998877332


Q ss_pred             CceeeeeecCCCCCCCCCCCcEEEEecCccCCCCCccccceeeeeeccchhhhhhhcCCCcCCcCCeEEeccCCCCCCCc
Q psy16044        139 KGVRAVCLTDADKRPVNPKQQCVATGWGRVKPKGDLVSKLRQIRVPLHNISVCRDKYGDSVELHGGHLCGGQLDGFSGAC  218 (436)
Q Consensus       139 ~~v~pi~l~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C  218 (436)
                      .   .+++     +.+..+..+.++|--......  .....+  ...+....            +..|=-    ---++=
T Consensus       104 ~---~l~F-----R~P~~~e~V~lVg~~fq~k~~--~s~vSe--sS~i~p~~------------~~~fWk----HwIsT~  155 (229)
T 1lvm_A          104 Q---KLKF-----REPQREERICLVTTNFQTKSM--SSMVSD--TSCTFPSS------------DGIFWK----HWIQTK  155 (229)
T ss_dssp             S---CCCB-----CCCCTTCEEEEEEEECSSSSC--EEEECC--CEECEEET------------TTTEEE----ECBCCC
T ss_pred             c---cccc-----CCCCCCCeEEEEEeEeecCCc--cEEECC--cceeEecC------------CCCEeE----EEeeCC
Confidence            2   2222     334456677777743322111  000000  00000000            000000    002345


Q ss_pred             cCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        219 IGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       219 ~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      .||=|.||+.. .+|.  ++||-|.+..
T Consensus       156 ~G~CGlPlVs~-~Dg~--IVGiHsl~~~  180 (229)
T 1lvm_A          156 DGQCGSPLVST-RDGF--IVGIHSASNF  180 (229)
T ss_dssp             TTCTTCEEEET-TTCC--EEEEEEEEET
T ss_pred             CCcCCCcEEEC-CCCc--EEEEEccccc
Confidence            68889999986 3554  9999998764


No 270
>3h09_A IGA1 protease, immunoglobulin A1 protease; serine protease, beta helix, hydrolase, M protease, secreted, transmembrane, virulence; 1.75A {Haemophilus influenzae}
Probab=78.51  E-value=1.6  Score=45.14  Aligned_cols=56  Identities=23%  Similarity=0.408  Sum_probs=36.1

Q ss_pred             CCccCCCCceeeeEe-cCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHHHHhhhh
Q psy16044        375 GACIGDSGGPLQCSL-KDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRKQINIAV  433 (436)
Q Consensus       375 ~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~~i~~~~  433 (436)
                      ..-.||||+||+.-+ +.++|+|+|+.++..+-.... --.|+-+.  .+++.+++.+..
T Consensus       257 y~~~GDSGSPlF~yD~~~~kWvl~Gvl~~~~g~~~~~-~~~w~i~~--~~f~~~i~~~d~  313 (989)
T 3h09_A          257 YAVLGDSGSPLFVYDREKGKWLFLGSYDFWAGYNKKS-WQEWNIYK--PEFAKTVLDKDT  313 (989)
T ss_dssp             BCCTTCTTCEEEEEETTTTEEEEEEEEEEECHHHHCC-EEEEEECC--HHHHHHHHHHHE
T ss_pred             cCCcCCCCCccceeecccceEEEEEEeecccccCCcc-cceeEecc--HHHHHhHhhccc
Confidence            445699999998876 678999999998632111111 11344443  577888876543


No 271
>3sze_A Serine protease ESPP; parallel beta-helix, hydrolase; 2.50A {Escherichia coli O157}
Probab=74.31  E-value=2.3  Score=44.08  Aligned_cols=28  Identities=29%  Similarity=0.355  Sum_probs=22.6

Q ss_pred             CCccCCCCceeeeEe-cCCcEEEEEEEEe
Q psy16044        375 GACIGDSGGPLQCSL-KDGRWYLAGITSF  402 (436)
Q Consensus       375 ~~c~gdsGgpl~~~~-~~~~~~l~Gi~S~  402 (436)
                      ..-.||||+||+.-+ +.++|+|+|+.+-
T Consensus       202 ~~~~GDSGSPlFaYD~~~~KWvl~GVl~~  230 (968)
T 3sze_A          202 IASQGDAGSALFVYDNQKKKWVVAGTVWG  230 (968)
T ss_dssp             ECCTTCTTCEEEEEETTTTEEEEEEEEEE
T ss_pred             cCCcCCCCCcceeEEcCCCeEEEEEEEec
Confidence            345699999998876 6789999999754


No 272
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=70.12  E-value=1.7  Score=35.99  Aligned_cols=22  Identities=23%  Similarity=0.305  Sum_probs=17.3

Q ss_pred             cCCCCceeeeEecCCcEEEEEEEEecC
Q psy16044        378 IGDSGGPLQCSLKDGRWYLAGITSFGS  404 (436)
Q Consensus       378 ~gdsGgpl~~~~~~~~~~l~Gi~S~~~  404 (436)
                      .||||||++...     -+|||.++..
T Consensus       111 PGDSGsPVl~~~-----~vIGV~T~s~  132 (198)
T 1mbm_A          111 SGDSGSAVVQGD-----AVVGVHTGSN  132 (198)
T ss_dssp             GGGTTCEEEETT-----EEEEEEEEEE
T ss_pred             CCCCCCccccCC-----eEEEEEeccC
Confidence            489999998632     4999998843


No 273
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=54.61  E-value=8.3  Score=32.39  Aligned_cols=21  Identities=38%  Similarity=0.708  Sum_probs=16.6

Q ss_pred             CCCCceeeeEecCCcEEEEEEEEec
Q psy16044        379 GDSGGPLQCSLKDGRWYLAGITSFG  403 (436)
Q Consensus       379 gdsGgpl~~~~~~~~~~l~Gi~S~~  403 (436)
                      |||||||+..  +|+  ++||.+-.
T Consensus       125 GdSGsPVvn~--dG~--VIGVHt~s  145 (213)
T 3fan_A          125 GDSGSPVITE--AGE--LVGVHTGS  145 (213)
T ss_dssp             CSTTCEEEET--TSC--EEEEEEC-
T ss_pred             CCCCCccCCC--CCc--EEEEEecc
Confidence            9999999874  555  99998764


No 274
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=46.28  E-value=13  Score=30.03  Aligned_cols=25  Identities=20%  Similarity=0.167  Sum_probs=18.3

Q ss_pred             CCccCCCCceeeeEecCCcEEEEEEEEec
Q psy16044        375 GACIGDSGGPLQCSLKDGRWYLAGITSFG  403 (436)
Q Consensus       375 ~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~  403 (436)
                      ....|+|||||+..  +|+  ++||.+..
T Consensus       121 ~i~pGnSGGPl~n~--~G~--VVGI~~~~  145 (163)
T 2w5e_A          121 RTQDGMSGAPVCDK--YCR--VLAVHQTN  145 (163)
T ss_dssp             SCSSCCTTCEEECT--TSC--EEEEEEEE
T ss_pred             EeCCCCchhhEEcC--CCE--EEEEEccC
Confidence            35568999999863  444  99998643


No 275
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=45.78  E-value=30  Score=27.19  Aligned_cols=29  Identities=24%  Similarity=0.536  Sum_probs=24.1

Q ss_pred             CCccCCCCceeeeEecCCcEEEEEEEEecC
Q psy16044        375 GACIGDSGGPLQCSLKDGRWYLAGITSFGS  404 (436)
Q Consensus       375 ~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~  404 (436)
                      +.-.||-|.|.+.+. ++.|+++||-..+.
T Consensus       135 GT~PGDCGcPYvykr-gn~~vv~GVHtAat  163 (185)
T 4ash_A          135 GTIPGDAGCPYVYKK-GNTWVVIGVHVAAT  163 (185)
T ss_dssp             SCCTTCTTCEEEEEE-TTEEEEEEEEEEEC
T ss_pred             CCCCCCCCCceEEee-CCceEEEEEEEeec
Confidence            566799999999884 89999999976653


No 276
>1fiw_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2
Probab=37.47  E-value=17  Score=18.96  Aligned_cols=24  Identities=25%  Similarity=0.340  Sum_probs=14.2

Q ss_pred             CceecCCCCCCccCCC-CCCeEeCC
Q psy16044          7 TVTFARDCGVGIRYSH-RQPRLING   30 (436)
Q Consensus         7 ~~~~~~~CG~~~~~~~-~~~~i~~G   30 (436)
                      |.+-.-.||.+.+... ..-||+||
T Consensus         2 n~tcdgpCGlrfrqn~q~~~rivGG   26 (26)
T 1fiw_L            2 NTTCDGPCGVRFRQNRQGGVRXXXX   26 (26)
T ss_pred             CcccccccCceeccCccccccccCC
Confidence            3444567997775533 24467665


No 277
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=34.94  E-value=30  Score=27.25  Aligned_cols=29  Identities=24%  Similarity=0.581  Sum_probs=23.0

Q ss_pred             CCccCCCCceeeeEecCCcEEEEEEEEecC
Q psy16044        375 GACIGDSGGPLQCSLKDGRWYLAGITSFGS  404 (436)
Q Consensus       375 ~~c~gdsGgpl~~~~~~~~~~l~Gi~S~~~  404 (436)
                      +.-.||-|.|.+.+. ++.|+++||-..+.
T Consensus       146 GT~PGDCGcPYvykr-gndwvv~GVH~Aat  174 (194)
T 2fyq_A          146 GTIPGDCGAPYVHKR-GNDWVVCGVHAAAT  174 (194)
T ss_dssp             --CGGGTTCEEEEEE-TTEEEEEEEEEEEC
T ss_pred             CCCCCCCCCceEEee-CCceEEEEEEEeec
Confidence            567799999999884 89999999976653


No 278
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=33.03  E-value=14  Score=30.76  Aligned_cols=43  Identities=19%  Similarity=0.180  Sum_probs=28.8

Q ss_pred             ccCCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccHHHHHH
Q psy16044        377 CIGDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYLPWIRK  427 (436)
Q Consensus       377 c~gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~~WI~~  427 (436)
                      ..|+||+|++....     +|||..-+..-+.   --.-+++..+.+||.+
T Consensus       146 ~~G~SGsP~~ng~~-----IVGvh~G~~~~~~---~N~a~n~~~~~~~~~~  188 (191)
T 1zyo_A          146 AAGWSGTPLYSSRG-----VVGMHVGFEEIGK---LNRGVNMFYVANYLLR  188 (191)
T ss_dssp             CTTCTTCEEECSSC-----EEEEEEEEEETTT---EEEEECHHHHHHHTCC
T ss_pred             CCCCCCCcEEcCCe-----EEEEEeCcccCCc---eeeeeehHHHhhhhhh
Confidence            55899999997422     8899765432111   2356888888888643


No 279
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=32.23  E-value=29  Score=27.02  Aligned_cols=34  Identities=29%  Similarity=0.601  Sum_probs=25.7

Q ss_pred             CCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccH
Q psy16044        379 GDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYL  422 (436)
Q Consensus       379 gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~  422 (436)
                      ||=||.|.|+..     ++||+..|-+    + ...|+++..+.
T Consensus       104 GDCGG~L~C~HG-----viGivTaGG~----g-~VaF~D~R~l~  137 (142)
T 2hrv_A          104 GDCGGKLLCKHG-----VIGIVTAGGD----N-HVAFIDLRHFH  137 (142)
T ss_dssp             TCTTCEEEETTE-----EEEEEEEECS----S-EEEEEEGGGGS
T ss_pred             CCCCceeeeCCC-----ceEEEecCCC----C-EEEEEEchhhh
Confidence            799999999743     9999987642    1 34699988753


No 280
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=31.99  E-value=29  Score=27.73  Aligned_cols=34  Identities=29%  Similarity=0.616  Sum_probs=26.1

Q ss_pred             CCCCceeeeEecCCcEEEEEEEEecCCCCCCCCCeEEEeCcccH
Q psy16044        379 GDSGGPLQCSLKDGRWYLAGITSFGSGCAKSGYPDVYTKLSFYL  422 (436)
Q Consensus       379 gdsGgpl~~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~V~~~~  422 (436)
                      ||=||.|.|+-.     ++||+..|-+    + ...|+++..+.
T Consensus       124 GDCGG~L~C~HG-----viGivTaGG~----g-~VaF~DiR~l~  157 (166)
T 1z8r_A          124 GDAGGILRCEHG-----VIGLVTMGGE----G-VVGFADVRDLL  157 (166)
T ss_dssp             CCCBSEEECSSS-----EEEEEEEECS----S-EEEEEESTTCC
T ss_pred             CCCCceeeeCCC-----ceEEEecCCC----C-EEEEEEcchhh
Confidence            799999999754     9999987642    1 35699998753


No 281
>1gj7_A Urokinase-type plasminogen activator; selectivity at S1, H2O displacement, UPA, TPA, Ser190/Ala190 protease, structure-based drug design; HET: CIT 132; 1.50A {Homo sapiens} SCOP: b.47.1.2 PDB: 1c5w_A* 1c5x_A* 1c5z_A* 1gi7_A* 1gi8_A* 1gi9_A* 1c5y_A* 1gj8_A* 1gj9_A* 1gja_A* 1gjb_A* 1gjc_A* 1gjd_A* 1lmw_A* 1o3p_A* 1o5a_A* 1o5b_A* 1o5c_A* 3ig6_A*
Probab=25.22  E-value=34  Score=18.17  Aligned_cols=19  Identities=11%  Similarity=0.181  Sum_probs=10.5

Q ss_pred             eecCCCCCCccCCCCCCeEeC
Q psy16044          9 TFARDCGVGIRYSHRQPRLIN   29 (436)
Q Consensus         9 ~~~~~CG~~~~~~~~~~~i~~   29 (436)
                      ..+++||++.  ..+.-||+|
T Consensus         8 ~~~f~CGq~~--~~r~~kIvG   26 (26)
T 1gj7_A            8 ELKFQCGQKT--LRPRFKXXX   26 (26)
T ss_pred             ccccccCCcC--CCccccccC
Confidence            3467799543  333337765


No 282
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=23.00  E-value=3.2e+02  Score=22.49  Aligned_cols=60  Identities=12%  Similarity=0.162  Sum_probs=34.6

Q ss_pred             eeeEEEEecCCEEEecCCCcCCCCCCCCCCcceEEEeccccCCccCCceEEEeeeEEEeCCCCCCCCCceeEEEeCCCCC
Q psy16044         56 HWCGAVLIHPSWVVTAAHCIHNDIFSLPIPELWTAVLGDWDRTEEEKSEVRIPVERIRVHEEFHNYHHDIALLKLSRPTS  135 (436)
Q Consensus        56 ~~C~GtLIs~~~VLTAAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAll~L~~~~~  135 (436)
                      .-++|--|-.+|.|-..|=..         .. .+.+..          +.+++.+.+.-..-+...-||++|+|++.-.
T Consensus        30 G~ft~LgI~d~~~viP~Ha~p---------~~-~i~i~G----------~~~~v~d~~~l~~~~gv~lElt~V~l~r~~k   89 (190)
T 4dcd_A           30 GEFTMLGVHDNVAILPTHASP---------GE-SIVIDG----------KEVEILDAKALEDQAGTNLEITIITLKRNEK   89 (190)
T ss_dssp             EEEEEEEEEBTEEEEEGGGCC---------CS-EEEETT----------EEEEEEEEEEEECTTCCEEEEEEEEESSSCC
T ss_pred             eEEEEEEEECcEEEEeCCCCC---------Cc-EEEECC----------EEEEeeEEEEEecCCCCeEEEEEEEcCCCcc
Confidence            458999999999999999321         11 222221          2233433322111122235999999998755


No 283
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=21.01  E-value=51  Score=25.10  Aligned_cols=25  Identities=32%  Similarity=0.509  Sum_probs=17.5

Q ss_pred             CccCCCCCeeeeEecCCcEEEEEEEeEcC
Q psy16044        217 ACIGDSGGPLQCSLKDGRWYLAGITSFGS  245 (436)
Q Consensus       217 ~C~gDsGgPl~~~~~~~~~~l~GI~S~g~  245 (436)
                      .-.||||-|++-+  .|+  +++|+--|.
T Consensus       104 g~~GdSGrPi~Dn--~Gr--VVaIVlGG~  128 (158)
T 4agk_A          104 GGPGDSGRPILDN--SGK--VVAIVLGGA  128 (158)
T ss_dssp             SCTTCTTCEEECT--TSC--EEEEEEEEE
T ss_pred             CCCCCCCCccccC--CCC--EEEEEecCC
Confidence            4579999999853  344  777776553


No 284
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=20.80  E-value=3.7e+02  Score=22.42  Aligned_cols=32  Identities=25%  Similarity=0.254  Sum_probs=23.4

Q ss_pred             CCCccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        215 SGACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       215 ~~~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      ..+-.||=||||++.+..+.-.++||-.-|.+
T Consensus       165 ~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~g  196 (212)
T 2hal_A          165 GEGLPGMCGGALVSSNQSIQNAILGIHVAGGN  196 (212)
T ss_dssp             CCCCTTCTTCEEEESCGGGTTCEEEEEEEEET
T ss_pred             cCCCCCcCCCeEEEccCCCCceEEEEEeCcCC
Confidence            34667899999998533334469999998854


No 285
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=20.28  E-value=3.6e+02  Score=22.11  Aligned_cols=25  Identities=28%  Similarity=0.429  Sum_probs=18.9

Q ss_pred             CccCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        217 ACIGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       217 ~C~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      +-.|+=||||+...     .++||-+-|.+
T Consensus       142 T~~G~CG~~li~~g-----kI~GiHvaG~G  166 (190)
T 3zve_A          142 TRAGQCGGVVTTTG-----KVIGIHVGGNG  166 (190)
T ss_dssp             CCTTCTTCEEEETT-----EEEEEEEEECS
T ss_pred             CCCCccCCeEEECC-----CEEEEEECcCC
Confidence            44567799999753     39999998865


No 286
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=20.24  E-value=58  Score=25.34  Aligned_cols=23  Identities=39%  Similarity=0.729  Sum_probs=19.4

Q ss_pred             cCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        219 IGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       219 ~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      .||=||.|.|.-.     ++||++.|..
T Consensus       103 pGDCGG~L~C~HG-----viGivTaGG~  125 (142)
T 2hrv_A          103 PGDCGGKLLCKHG-----VIGIVTAGGD  125 (142)
T ss_dssp             TTCTTCEEEETTE-----EEEEEEEECS
T ss_pred             CCCCCceeeeCCC-----ceEEEecCCC
Confidence            6899999999743     9999998864


No 287
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=20.18  E-value=57  Score=26.05  Aligned_cols=23  Identities=35%  Similarity=0.787  Sum_probs=19.4

Q ss_pred             cCCCCCeeeeEecCCcEEEEEEEeEcCC
Q psy16044        219 IGDSGGPLQCSLKDGRWYLAGITSFGSG  246 (436)
Q Consensus       219 ~gDsGgPl~~~~~~~~~~l~GI~S~g~~  246 (436)
                      +||=||.|.|.-.     ++||++.|..
T Consensus       123 pGDCGG~L~C~HG-----viGivTaGG~  145 (166)
T 1z8r_A          123 PGDAGGILRCEHG-----VIGLVTMGGE  145 (166)
T ss_dssp             CCCCBSEEECSSS-----EEEEEEEECS
T ss_pred             CCCCCceeeeCCC-----ceEEEecCCC
Confidence            6899999999743     9999998754


Done!